Psyllid ID: psy1119
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1392 | 2.2.26 [Sep-21-2011] | |||||||
| P19096 | 2504 | Fatty acid synthase OS=Mu | yes | N/A | 0.732 | 0.407 | 0.425 | 0.0 | |
| P12276 | 2512 | Fatty acid synthase OS=Ga | yes | N/A | 0.738 | 0.409 | 0.419 | 0.0 | |
| P12785 | 2505 | Fatty acid synthase OS=Ra | yes | N/A | 0.734 | 0.407 | 0.417 | 0.0 | |
| Q71SP7 | 2513 | Fatty acid synthase OS=Bo | yes | N/A | 0.732 | 0.405 | 0.410 | 0.0 | |
| P49327 | 2511 | Fatty acid synthase OS=Ho | yes | N/A | 0.728 | 0.403 | 0.411 | 0.0 | |
| P96202 | 2188 | Phthiocerol synthesis pol | yes | N/A | 0.443 | 0.282 | 0.288 | 1e-58 | |
| Q7TXL8 | 2188 | Phthiocerol/phenolphthioc | yes | N/A | 0.443 | 0.282 | 0.288 | 1e-58 | |
| B2HIL7 | 2104 | Phenolphthiocerol synthes | no | N/A | 0.322 | 0.213 | 0.305 | 1e-50 | |
| Q02251 | 2111 | Mycocerosic acid synthase | no | N/A | 0.370 | 0.244 | 0.313 | 1e-49 | |
| Q54FI3 | 2968 | Probable polyketide synth | yes | N/A | 0.357 | 0.167 | 0.282 | 2e-49 |
| >sp|P19096|FAS_MOUSE Fatty acid synthase OS=Mus musculus GN=Fasn PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/1123 (42%), Positives = 674/1123 (60%), Gaps = 103/1123 (9%)
Query: 307 PLVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCIRKETGGERT 366
P+ + V F W+ L+ LA TS+ Q + L + P SG++G NC+RKE GG R
Sbjct: 1406 PIFLSVEDTSFQWVDSLKSTLA---TSSSQPVWLTAMDCPTSGVVGLVNCLRKEPGGHRI 1462
Query: 367 RCFEILD----KNAPPFNPEDPFYKVQVEKDLAVNILRNGQWGTYRHSILQPIK-RVMTD 421
RC + + +AP +P P + ++ DL +N+ R+G WG +RH L+ K + T
Sbjct: 1463 RCILLSNLSNTSHAPKLDPGSPELQQVLKHDLVMNVYRDGAWGAFRHFQLEQDKPKEQTA 1522
Query: 422 HAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLA 481
HA++N L RGD++S+ W P+ K + + +YY+S+NFRDIML T KL+
Sbjct: 1523 HAFVNVLTRGDLASIRWVSSPL-----KHTQPSSSGAQLCTVYYASLNFRDIMLATGKLS 1577
Query: 482 PEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLE 541
P+ I + + C++G E+SGR R G+RVMGL LA + W++P WTLE
Sbjct: 1578 PDAIPGKWASRDCMLGMEFSGRDR-CGRRVMGLVPAEGLATSVLLSSDFLWDVPSSWTLE 1636
Query: 542 DAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPE 601
+AA+VP VY TA Y++ + G++Q+GE++LIH+GSGGVGQAAI++A + +FTTVG+ E
Sbjct: 1637 EAASVPVVYTTAYYSLVVRGRIQRGETVLIHSGSGGVGQAAISIALSLGCRVFTTVGSAE 1696
Query: 602 KREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQG 661
KR +++ FP + + + NSRDTSFEQ V+ T G+GVDLVLNSLAEEKLQASVRCLAQ
Sbjct: 1697 KRAYLQARFPQLDDTSFANSRDTSFEQHVLLHTGGKGVDLVLNSLAEEKLQASVRCLAQH 1756
Query: 662 GRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFF-FAEQEWKMSLQKALQKAIDAGA 720
GRFLEIGKFDL+NN+ LGM +F++ +FHG++LD F A W+ + L+ I G
Sbjct: 1757 GRFLEIGKFDLSNNHPLGMAIFLKNVTFHGILLDALFEEANDSWR-EVAALLKAGIRDGV 1815
Query: 721 VQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQLL-AVPRYYAD 779
V+PL T+FP+ +VE+AFRYMA GKHIGKV++++R+EEP + L+ A+ + +
Sbjct: 1816 VKPLKCTVFPKAQVEDAFRYMAQGKHIGKVLVQVREEEPEAVLPGAQPTLISAISKTFCP 1875
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
++KSYII GGLGGFGLELA WLVLRGA++LVLTSRSG++ GYQA I+ W+ +QVL+S
Sbjct: 1876 AHKSYIITGGLGGFGLELARWLVLRGAQRLVLTSRSGIRTGYQAKHIREWRRQGIQVLVS 1935
Query: 840 TDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYF 899
T ++++ G L+ EA KLGPV G+FNLA+VL+DA+ ENQTPE F PK N T
Sbjct: 1936 TSNVSSLEGARALIAEATKLGPVGGVFNLAMVLRDAMLENQTPELFQDVNKPKYNGTLNL 1995
Query: 900 DKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGA 959
D+ +R CP L FV FSSVSCGRGNAGQTNYG ANS MERICE RR +GLPGLAV+WGA
Sbjct: 1996 DRATREACPELDYFVAFSSVSCGRGNAGQTNYGFANSTMERICEQRRHDGLPGLAVQWGA 2055
Query: 960 VGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKKAGSGG- 1018
+G+VG+V + N + VIGGTL QRIS+C+E L+ FL Q +++S V+AEKKA + G
Sbjct: 2056 IGDVGIVLEAMGTN-DTVIGGTLPQRISSCMEVLDLFLNQPHAVLSSFVLAEKKAVAHGD 2114
Query: 1019 ---ATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIR 1075
++V AV +ILG+RDL ++L STLA+LG+DS+M VE++Q LERE ++ L +++R
Sbjct: 2115 GDTQRDLVKAVAHILGIRDLAGINLDSTLADLGLDSLMGVEVRQILEREHDLVLPMREVR 2174
Query: 1076 GLTFAKLQDIAVSFEN-DDKSKPVSTEASGGQVTALSVEDIPDVGIQYLMRTIGDEILAN 1134
LT KLQ+++ ++ D + P S + + L++ +L N
Sbjct: 2175 QLTLRKLQEMSSKTDSATDTTAPKSRSDTSLKQNQLNL----------------STLLVN 2218
Query: 1135 KPVIRLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTNP 1194
L L N+ + E P +F+V IEG TV LA ++ Q P
Sbjct: 2219 PEGPTLTQL-NSVQSSERP------LFLVHPIEGSTTVFHSLAAKLSVPTYGLQCTQAAP 2271
Query: 1195 PDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLE-QLG---TKCHLYL 1250
D+IP +A + K+ V ++ G+SFG VA E+ +L+ Q G T +L+L
Sbjct: 2272 LDSIPNLAAYYIDCIKQ--VQPEGPYRIAGYSFGACVAFEMCSQLQAQQGPAPTHNNLFL 2329
Query: 1251 VDSAPDYVLTSLRKLPDWNAKLN-----------------YFLD---------LMP---- 1280
D + YVL + + AK+ FLD L+P
Sbjct: 2330 FDGSHTYVLAYTQS---YRAKMTPGCEAEAEAEALCFFIKQFLDVEHSKVLEALLPLKSL 2386
Query: 1281 ED----------ATHSRTYQRNLAHAA---YKRITSILKYTDPKHKAFGGNITLLRPTEQ 1327
ED +H +R L+ AA Y ++ + +Y PK K + GN+TLLR
Sbjct: 2387 EDRVAASVDLITKSHHSLDRRELSFAAVSFYHKLRAADQY-KPKAK-YHGNVTLLRAKTG 2444
Query: 1328 AL---PTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQII 1367
DY LS+VC V VH ++G+H T+L+ II
Sbjct: 2445 GTYGEDLGADYNLSQVCDGKVSVHIIEGDHRTLLEGSGLESII 2487
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Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein. Mus musculus (taxid: 10090) EC: 3EC: .EC: 1EC: .EC: 2EC: .EC: 1EC: 4 |
| >sp|P12276|FAS_CHICK Fatty acid synthase OS=Gallus gallus GN=FASN PE=1 SV=5 | Back alignment and function description |
|---|
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/1131 (41%), Positives = 680/1131 (60%), Gaps = 103/1131 (9%)
Query: 300 KSPVKISPLVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCIRK 359
+SP K +P+++ V + W+ L++ LA S++Q + L + SGI+G NC+R
Sbjct: 1411 QSPAK-APILLPVDDTHYKWVDSLKEILA---DSSEQPLWLTATNCGNSGILGMVNCLRL 1466
Query: 360 ETGGERTRCFEILDKNAPPFNPEDPFYKVQ----VEKDLAVNILRNGQWGTYRHSILQPI 415
E G R RC + + + P ++ +E+DL +N+ R+G+WG++RH LQ
Sbjct: 1467 EAEGHRIRCVFVSNLSPSSTVPATSLSSLEMQKIIERDLVMNVYRDGKWGSFRHLPLQQA 1526
Query: 416 K-RVMTDHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIM 474
+ + +T+ AY+N L RGD+SSL W P+ + + N N + ++YY+S+NF DIM
Sbjct: 1527 QPQELTECAYVNVLTRGDLSSLRWIVSPL-----RHFQTTNPNVQLCKVYYASLNFWDIM 1581
Query: 475 LTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEI 534
L T KL+P+ I Q C++G E+SGR +G+RVMGL + LA + D WE+
Sbjct: 1582 LATGKLSPDAIPGNWTLQQCMLGMEFSGR-DLAGRRVMGLLPAKGLATVVDCDKRFLWEV 1640
Query: 535 PDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIF 594
P+ WTLE+AA+VP VYATA YA+ + G M+KGES+LIH+GSGGVGQAAI +A M +F
Sbjct: 1641 PENWTLEEAASVPVVYATAYYALVVRGGMKKGESVLIHSGSGGVGQAAIAIALSMGCRVF 1700
Query: 595 TTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQAS 654
TVG+ EKRE+++ FP + + +SR+T+F+Q +++ T G+GV LVLNSLAEEKLQAS
Sbjct: 1701 ATVGSAEKREYLQARFPQLDANSFASSRNTTFQQHILRVTNGKGVSLVLNSLAEEKLQAS 1760
Query: 655 VRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFF-AEQEWKMSLQKALQ 713
+RCLAQ GRFLEIGKFDL+NN+ LGM +F++ +FHG++LD+ F QEW++ + + L
Sbjct: 1761 LRCLAQHGRFLEIGKFDLSNNSQLGMALFLKNVAFHGILLDSIFEEGNQEWEV-VSELLT 1819
Query: 714 KAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQLLAV 773
K I G V+PL T+F +++VE AFR+MA GKHIGKV+IKI++EE + +L A+
Sbjct: 1820 KGIKDGVVKPLRTTVFGKEEVEAAFRFMAQGKHIGKVMIKIQEEEKQYPLRSEPVKLSAI 1879
Query: 774 PRYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYD 833
R KSYII GGLGGFGLELA WL+ RGA+KLVLTSRSG++ GYQA ++ WK+
Sbjct: 1880 SRTSCPPTKSYIITGGLGGFGLELAQWLIERGAQKLVLTSRSGIRTGYQAKCVREWKALG 1939
Query: 834 VQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKA 893
+QVL+ST D+ T G L+ EA KLGPV GIFNLAVVLKDA+ ENQTPE F PK
Sbjct: 1940 IQVLVSTSDVGTLEGTQLLIEEALKLGPVGGIFNLAVVLKDAMIENQTPELFWEVNKPKY 1999
Query: 894 NATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGL 953
+ T + D +R CP L FVVFSSVSCGRGNAGQ+NYG ANS MERICE R +GLPGL
Sbjct: 2000 SGTLHLDWVTRKKCPDLDYFVVFSSVSCGRGNAGQSNYGFANSAMERICEQRHHDGLPGL 2059
Query: 954 AVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEK- 1012
AV+WGA+G+VG++ M N EVVIGGT+ Q+IS+CLE L+ FL Q P+++S V+AEK
Sbjct: 2060 AVQWGAIGDVGILKAMG--NREVVIGGTVLQQISSCLEVLDMFLNQPHPVMSSFVLAEKV 2117
Query: 1013 --KAGSGGATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLT 1070
K+ G ++V+AV +ILG+RD+ +++ S+LA+LG+DS+M VE++QTLER++++ +T
Sbjct: 2118 SVKSEGGSQRDLVEAVAHILGVRDVSSLNAESSLADLGLDSLMGVEVRQTLERDYDIVMT 2177
Query: 1071 PQDIRGLTFAKLQDIAVSFENDDKSKPVSTEASGGQVTALSVEDIPDVGIQYLMRTIGDE 1130
++IR LT KL++++ ++ KP QV + P + + L+
Sbjct: 2178 MREIRLLTINKLRELSSKTGTAEELKP-------SQVLKTGPGEPPKLDLNNLL------ 2224
Query: 1131 ILANKPVI-RLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQF 1189
+ P I RL N + E P +F+V IEG V LA ++ Q
Sbjct: 2225 VNPEGPTITRL----NEVQSTERP------LFLVHPIEGSIAVFYTLASKLHMPCYGLQC 2274
Query: 1190 DHTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKCH-- 1247
P D+I +A + K+ + ++ G+SFG VA E+ +L+ H
Sbjct: 2275 TKAAPLDSIQSLASYYIDCMKQ--IQPEGPYRIAGYSFGACVAFEMCSQLQAQQNASHAL 2332
Query: 1248 --LYLVDSAPDYV---------------------------------------LTSLRKLP 1266
L+L D + +V L L L
Sbjct: 2333 NSLFLFDGSHSFVAAYTQSYRAKLTQGNEAALETEALCAFVQQFTGIEYNKLLEILLPLE 2392
Query: 1267 DWNAKLNYFLDLMPEDATHSRTYQRNLAHAA---YKRITSILKYTDPKHKAFGGNITLLR 1323
D A++N DL+ + H + L+ AA Y ++ + KY P+ K + GN+TL+R
Sbjct: 2393 DLEARVNAAADLITQ--IHKNINREALSFAAASFYHKLKAADKYI-PESK-YHGNVTLMR 2448
Query: 1324 P---TEQALPTAEDYGLSKVCKKPVKVHFVDGNHFTVL--DNIKSAQIIMH 1369
E DY LS+VC V VH ++G+H T+L D ++S I+H
Sbjct: 2449 AKTHNEYEEGLGGDYRLSEVCDGKVSVHIIEGDHRTLLEGDGVESIIGIIH 2499
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Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein. Gallus gallus (taxid: 9031) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: 1 EC: 4 |
| >sp|P12785|FAS_RAT Fatty acid synthase OS=Rattus norvegicus GN=Fasn PE=1 SV=3 | Back alignment and function description |
|---|
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/1122 (41%), Positives = 666/1122 (59%), Gaps = 100/1122 (8%)
Query: 307 PLVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCIRKETGGERT 366
P+ + V F W+ L+ LA TS+ Q + L + P SG++G NC+RKE GG R
Sbjct: 1406 PIFLPVEDTSFQWVDSLKSILA---TSSSQPVWLTAMNCPTSGVVGLVNCLRKEPGGHRI 1462
Query: 367 RCFEILD----KNAPPFNPEDPFYKVQVEKDLAVNILRNGQWGTYRHSILQPIK-RVMTD 421
RC + + + P +P + +E DL +N+ R+G WG +RH L+ K T
Sbjct: 1463 RCILLSNLSSTSHVPKLDPGSSELQKVLESDLVMNVYRDGAWGAFRHFQLEQDKPEEQTA 1522
Query: 422 HAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLA 481
HA++N L RGD++S+ W P +K + S + +YY+S+NFRDIML T KL+
Sbjct: 1523 HAFVNVLTRGDLASIRWVSSP--LKHMQPPSSSGAQ--LCTVYYASLNFRDIMLATGKLS 1578
Query: 482 PEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLE 541
P+ I + + C++G E+SGR + G+RVMGL LA + W++P WTLE
Sbjct: 1579 PDAIPGKWASRDCMLGMEFSGRDK-CGRRVMGLVPAEGLATSVLLSPDFLWDVPSSWTLE 1637
Query: 542 DAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPE 601
+AA+VP VY TA Y++ + G++Q GE++LIH+GSGGVGQAAI++A + +FTTVG+ E
Sbjct: 1638 EAASVPVVYTTAYYSLVVRGRIQHGETVLIHSGSGGVGQAAISIALSLGCRVFTTVGSAE 1697
Query: 602 KREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQG 661
KR +++ FP + + + NSRDTSFEQ V+ T G+GVDLVLNSLAEEKLQASVRCLAQ
Sbjct: 1698 KRAYLQARFPQLDDTSFANSRDTSFEQHVLLHTGGKGVDLVLNSLAEEKLQASVRCLAQH 1757
Query: 662 GRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAV 721
GRFLEIGKFDL+NN+ LGM +F++ +FHG++LD F + + + L+ I G V
Sbjct: 1758 GRFLEIGKFDLSNNHPLGMAIFLKNVTFHGILLDALFEGANDSWREVAELLKAGIRDGVV 1817
Query: 722 QPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQLL-AVPRYYADS 780
+PL T+FP+ +VE+AFRYMA GKHIGKV++++R+EEP + L+ A+ + +
Sbjct: 1818 KPLKCTVFPKAQVEDAFRYMAQGKHIGKVLVQVREEEPEAMLPGAQPTLISAISKTFCPE 1877
Query: 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIST 840
+KSYII GGLGGFGLELA WLVLRGA++LVLTSRSG++ GYQA ++ W+ + VL+ST
Sbjct: 1878 HKSYIITGGLGGFGLELARWLVLRGAQRLVLTSRSGIRTGYQAKHVREWRRQGIHVLVST 1937
Query: 841 DDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFD 900
++++ G L+ EA KLGPV G+FNLA+VL+DA+ ENQTPE F PK N T D
Sbjct: 1938 SNVSSLEGARALIAEATKLGPVGGVFNLAMVLRDAMLENQTPELFQDVNKPKYNGTLNLD 1997
Query: 901 KYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGAV 960
+ +R CP L FV FSSVSCGRGNAGQ+NYG ANS MERICE RR +GLPGLAV+WGA+
Sbjct: 1998 RATREACPELDYFVAFSSVSCGRGNAGQSNYGFANSTMERICEQRRHDGLPGLAVQWGAI 2057
Query: 961 GEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKKA---GSG 1017
G+VG++ + N + V+GGTL QRIS+C+E L+ FL Q +++S V+AEKKA G G
Sbjct: 2058 GDVGIILEAMGTN-DTVVGGTLPQRISSCMEVLDLFLNQPHAVLSSFVLAEKKAVAHGDG 2116
Query: 1018 GAT-NIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIRG 1076
A ++V AV +ILG+RDL ++L S+LA+LG+DS+M VE++Q LERE ++ L +++R
Sbjct: 2117 EAQRDLVKAVAHILGIRDLAGINLDSSLADLGLDSLMGVEVRQILEREHDLVLPIREVRQ 2176
Query: 1077 LTFAKLQDIAVSFENDDK-SKPVSTEASGGQVTALSVEDIPDVGIQYLMRTIGDEILANK 1135
LT KLQ+++ +D + + P S + + L++ IL
Sbjct: 2177 LTLRKLQEMSSKAGSDTELAAPKSKNDTSLKQAQLNL-----------------SILLVN 2219
Query: 1136 PVIRLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTNPP 1195
P + N+ + E P +F+V IEG TV LA ++ Q P
Sbjct: 2220 PEGPTLTRLNSVQSSERP------LFLVHPIEGSITVFHSLAAKLSVPTYGLQCTQAAPL 2273
Query: 1196 DTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKL--EQLGTKCH--LYLV 1251
D+IP +A + K+ V ++ G+SFG VA E+ +L +Q H L+L
Sbjct: 2274 DSIPNLAAYYIDCIKQ--VQPEGPYRVAGYSFGACVAFEMCSQLQAQQGPAPAHNNLFLF 2331
Query: 1252 DSAPDYVLTSLRKLPDWNAKLN-----------------YFLD---------LMP----E 1281
D + YVL + + AKL F+D L+P E
Sbjct: 2332 DGSHTYVLAYTQS---YRAKLTPGCEAEAEAEAICFFIKQFVDAEHSKVLEALLPLKSLE 2388
Query: 1282 D----------ATHSRTYQRNLAHAA---YKRITSILKYTDPKHKAFGGNITLLRPTEQA 1328
D +H +R+L+ AA Y ++ + +Y PK K + GN+ LLR
Sbjct: 2389 DRVAAAVDLITRSHQSLDRRDLSFAAVSFYYKLRAADQY-KPKAK-YHGNVILLRAKTGG 2446
Query: 1329 L---PTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQII 1367
DY LS+VC V VH ++G+H T+L+ II
Sbjct: 2447 TYGEDLGADYNLSQVCDGKVSVHIIEGDHRTLLEGRGLESII 2488
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Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: 1 EC: 4 |
| >sp|Q71SP7|FAS_BOVIN Fatty acid synthase OS=Bos taurus GN=FASN PE=2 SV=1 | Back alignment and function description |
|---|
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/1131 (41%), Positives = 658/1131 (58%), Gaps = 111/1131 (9%)
Query: 306 SPLVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCIRKETGGER 365
SP+ + V F W+ L+ LA S+ + + L++ SG++G NC+RKE G R
Sbjct: 1414 SPIFLPVEDTSFQWVDSLKNILA---DSSSRAVWLMAVGCTTSGVVGLVNCLRKEPDGHR 1470
Query: 366 TRCFEILDKNA----PPFNPEDPFYKVQVEKDLAVNILRNGQWGTYRHSILQPIK-RVMT 420
RC + + N+ P +P+ + ++ DL +N+ R+G WG +RH L+ K T
Sbjct: 1471 IRCVLVSNLNSTSPIPETDPKSLELQKVLQSDLVMNVYRDGAWGAFRHFPLEQDKPEEQT 1530
Query: 421 DHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNI-NHDIAQIYYSSINFRDIMLTTAK 479
+HA+IN L RGD+SS+ W P+ ++S+ + IYY+S+NF+ +
Sbjct: 1531 EHAFINVLTRGDLSSIRWVCSPL------RHSQPTAPGFQLCTIYYASLNFKRNHAGHGQ 1584
Query: 480 LAPEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWT 539
P ++C++G E+SGR SGKRVMGL LA W++P WT
Sbjct: 1585 AVPRRHPRNWASRNCLLGMEFSGR-DASGKRVMGLVPAEGLATSTLVPQSFLWDVPSNWT 1643
Query: 540 LEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599
LE+AA+VP VY+TA YA+ + G+MQ GE++LIH+GSGGVGQAAI +A + +F VG+
Sbjct: 1644 LEEAASVPVVYSTAYYALMVRGRMQPGETVLIHSGSGGVGQAAIAIALSLGCRVFPLVGS 1703
Query: 600 PEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLA 659
EKR +++ FP + E + NSRDTSFEQ V+ T G+G DLVLNSLAEEKLQASVRCLA
Sbjct: 1704 AEKRAYLQSRFPQLNETSFANSRDTSFEQHVLWHTAGKGADLVLNSLAEEKLQASVRCLA 1763
Query: 660 QGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAG 719
Q GRFLEIGKFDL+ N+ LGM +F++ +FHG++LD+ F + L+ I G
Sbjct: 1764 QHGRFLEIGKFDLSKNHPLGMAIFLKNVTFHGILLDSLFEENNTMWQEVSTLLKAGIRKG 1823
Query: 720 AVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICT-PKVKQLLAVPRYYA 778
VQPL RT+FP + E+AFRYMA GKHIGKV+I++R+EE + K Q++A+ + +
Sbjct: 1824 VVQPLKRTVFPRTQAEDAFRYMAQGKHIGKVVIQVREEEQEAVLHGTKPTQMVALCKTFC 1883
Query: 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLI 838
++KSYII GGLGGFGLELA WLV RGA+KLVLTSRSG++ GYQA ++ W+ VQVL+
Sbjct: 1884 PAHKSYIITGGLGGFGLELAHWLVERGAQKLVLTSRSGIRTGYQARQVHEWRRQGVQVLV 1943
Query: 839 STDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
ST D++T G +L+TEA +LGPV GIFNLAVVL+DA+ +NQTPE F PK N T
Sbjct: 1944 STSDVSTLDGTRSLITEAAQLGPVGGIFNLAVVLRDAMLDNQTPEFFQDVNKPKYNGTLN 2003
Query: 899 FDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWG 958
D+ +R CP L F VFSSVSCGRGNAGQTNYG ANS MERICE RR +GLPGLAV+WG
Sbjct: 2004 LDRVTREACPELDYFEVFSSVSCGRGNAGQTNYGFANSTMERICEKRRHDGLPGLAVQWG 2063
Query: 959 AVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEK---KAG 1015
A+ +VGL+ ++ + + IGGTL QRI++C+E L+ FL Q P+++S V+AEK +
Sbjct: 2064 AIADVGLLMEL-KGTKDKAIGGTLPQRITSCMEVLDLFLNQPHPVLSSFVLAEKATSRGP 2122
Query: 1016 SGGATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIR 1075
SG ++V AV +ILG+RDL TV+L S+L++LG+DS+M VE++Q LERE + L+ ++IR
Sbjct: 2123 SGSHQDLVKAVTHILGIRDLATVNLDSSLSDLGLDSLMGVEVRQMLEREHNLLLSMREIR 2182
Query: 1076 GLTFAKLQDIAVSFENDDKSKPVSTEASGGQVTALSVEDIPDVG--IQYLMRTIGDEILA 1133
LT KLQ+I+ A G L+ + P G Q + +L
Sbjct: 2183 QLTIHKLQEIS---------------AQAGTADELT-DSTPKFGSPAQSHTQLNLSTLLV 2226
Query: 1134 NKPVIRLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTN 1193
N L L N+ + E P +F+V IEG TV LA ++ Q
Sbjct: 2227 NPEGPTLTRL-NSVQSSERP------LFLVHPIEGSTTVFHSLATKLSIPTYGLQCTGAA 2279
Query: 1194 PPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLG----TKCHLY 1249
P D+I +A + ++ V ++ G+S+G VA E+ +L+ T L+
Sbjct: 2280 PLDSIQSLATYYIECIRQ--VQPEGNYRIAGYSYGACVAFEMCSQLQAQQNAGPTNNSLF 2337
Query: 1250 LVDSAPDYVLTSLRKLPDWNAKLN-------------YFLDLMPEDATHSRTYQRNL--- 1293
L D + +V+ + + AKLN +F+ E A HSR + L
Sbjct: 2338 LFDGSHTFVMAYTQ---SYRAKLNPGCEAEAEAEAMCFFMQQFTE-AEHSRVLEALLPLG 2393
Query: 1294 ---------------AHAA-------------YKRITSILKYTDPKHKAFGGNITLLRPT 1325
+HA Y ++ + +YT P+ + GN+TLLR
Sbjct: 2394 DLEARVAATVELIVQSHAGLDRHALSFAARSFYHKLRAAEEYT-PR-ATYHGNVTLLRAK 2451
Query: 1326 -----EQALPTAEDYGLSKVCKKPVKVHFVDGNHFTVLD--NIKSAQIIMH 1369
++ L DY LS+VC V VH ++G+H T+L+ ++S I+H
Sbjct: 2452 MGSAYQEGL--GADYNLSQVCDGKVSVHIIEGDHRTLLEGSGLESILSIIH 2500
|
Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: 1 EC: 4 |
| >sp|P49327|FAS_HUMAN Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3 | Back alignment and function description |
|---|
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/1118 (41%), Positives = 663/1118 (59%), Gaps = 104/1118 (9%)
Query: 306 SPLVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCIRKETGGER 365
SP+ + V F W+ L+ LA E++S + + L + SG++G NC+R+E GG R
Sbjct: 1411 SPIFLPVDDTSFRWVESLKGILADEDSS--RPVWLKAINCATSGVVGLVNCLRREPGGNR 1468
Query: 366 TRCFEILDKNAPPFNPE-DP----FYKVQVEKDLAVNILRNGQWGTYRHSILQPIK-RVM 419
RC + + ++ PE DP KV ++ DL +N+ R+G WG +RH +L+ K
Sbjct: 1469 LRCVLLSNLSSTSHVPEVDPGSAELQKV-LQGDLVMNVYRDGAWGAFRHFLLEEDKPEEP 1527
Query: 420 TDHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAK 479
T HA+++ L RGD+SS+ W + + + +YY+S+NFRDIML T K
Sbjct: 1528 TAHAFVSTLTRGDLSSIRWV-----CSSLRHAQPTCPGAQLCTVYYASLNFRDIMLATGK 1582
Query: 480 LAPEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWT 539
L+P+ I + Q ++G E+SGR SGKRVMGL + LA + W++P WT
Sbjct: 1583 LSPDAIPGKWTSQDSLLGMEFSGR-DASGKRVMGLVPAKGLATSVLLSPDFLWDVPSNWT 1641
Query: 540 LEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599
LE+AA+VP VY+TA YA+ + G+++ GE++LIH+GSGGVGQAAI +A + +FTTVG+
Sbjct: 1642 LEEAASVPVVYSTAYYALVVRGRVRPGETLLIHSGSGGVGQAAIAIALSLGCRVFTTVGS 1701
Query: 600 PEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLA 659
EKR +++ FP + + NSRDTSFEQ V+ T G+GVDLVLNSLAEEKLQASVRCLA
Sbjct: 1702 AEKRAYLQARFPQLDSTSFANSRDTSFEQHVLWHTGGKGVDLVLNSLAEEKLQASVRCLA 1761
Query: 660 QGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFF-AEQEWKMSLQKALQKAIDA 718
GRFLEIGKFDL+ N+ LGM +F++ +FHGV+LD FF + +W+ + +Q I
Sbjct: 1762 THGRFLEIGKFDLSQNHPLGMAIFLKNVTFHGVLLDAFFNESSADWR-EVWALVQAGIRD 1820
Query: 719 GAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICT-PKVKQLLAVPRYY 777
G V+PL T+F +VE+AFRYMA GKHIGKV++++ EEP + K K + A+ + +
Sbjct: 1821 GVVRPLKCTVFHGAQVEDAFRYMAQGKHIGKVVVQVLAEEPEAVLKGAKPKLMSAISKTF 1880
Query: 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVL 837
++KSYII GGLGGFGLELA WL+ RG +KLVLTSRSG++ GYQA +++ W+ VQV
Sbjct: 1881 CPAHKSYIIAGGLGGFGLELAQWLIQRGVQKLVLTSRSGIRTGYQAKQVRRWRRQGVQVQ 1940
Query: 838 ISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATK 897
+ST +I++ G L+ EA +LGPV G+FNLAVVL+D L ENQTPE F PK + T
Sbjct: 1941 VSTSNISSLEGARGLIAEAAQLGPVGGVFNLAVVLRDGLLENQTPEFFQDVCKPKYSGTL 2000
Query: 898 YFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEW 957
D+ +R CP L FVVFSSVSCGRGNAGQ+NYG ANS MERICE RR EGLPGLAV+W
Sbjct: 2001 NLDRVTREACPELDYFVVFSSVSCGRGNAGQSNYGFANSAMERICEKRRHEGLPGLAVQW 2060
Query: 958 GAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKKAG-- 1015
GA+G+VG++ + N + ++ GTL QR+++CLE L+ FL Q +++S V+AEK A
Sbjct: 2061 GAIGDVGILVETMSTN-DTIVSGTLPQRMASCLEVLDLFLNQPHMVLSSFVLAEKAAAYR 2119
Query: 1016 -SGGATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI 1074
++V+AV +ILG+RDL V+L S+LA+LG+DS+M+VE++QTLERE + L+ +++
Sbjct: 2120 DRDSQRDLVEAVAHILGIRDLAAVNLDSSLADLGLDSLMSVEVRQTLERELNLVLSVREV 2179
Query: 1075 RGLTFAKLQDIAV-SFENDDKSKPVSTEAS-GGQVTALSVEDIPDVGIQYLMRTIGDEIL 1132
R LT KLQ+++ + E + + P E Q T L++ + L+ G ++
Sbjct: 2180 RQLTLRKLQELSSKADEASELACPTPKEDGLAQQQTQLNLRSL-------LVNPEGPTLM 2232
Query: 1133 ANKPVIRLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHT 1192
RL S++++ E P +F+V IEG TV LA ++ Q
Sbjct: 2233 ------RLNSVQSS----ERP------LFLVHPIEGSTTVFHSLASRLSIPTYGLQCTRA 2276
Query: 1193 NPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKL--EQLGTKCH--L 1248
P D+I +A + ++ V ++ G+S+G VA E+ +L +Q H L
Sbjct: 2277 APLDSIHSLAAYYIDCIRQ--VQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSL 2334
Query: 1249 YLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPE------------DATHSRTYQ------ 1290
+L D +P YVL + + AKL + E D H+R +
Sbjct: 2335 FLFDGSPTYVLAYTQS---YRAKLTPGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLK 2391
Query: 1291 ----------------------RNLAHAA---YKRITSILKYTDPKHKAFGGNITLLRPT 1325
+ L+ AA Y ++ + +YT PK K + GN+ LLR
Sbjct: 2392 GLEERVAAAVDLIIKSHQGLDRQELSFAARSFYYKLRAAEQYT-PKAK-YHGNVMLLRAK 2449
Query: 1326 EQAL---PTAEDYGLSKVCKKPVKVHFVDGNHFTVLDN 1360
DY LS+VC V VH ++G+H T+L+
Sbjct: 2450 TGGAYGEDLGADYNLSQVCDGKVSVHVIEGDHRTLLEG 2487
|
Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: 1 EC: 4 |
| >sp|P96202|PPSC_MYCTU Phthiocerol synthesis polyketide synthase type I PpsC OS=Mycobacterium tuberculosis GN=ppsC PE=1 SV=2 | Back alignment and function description |
|---|
Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 198/687 (28%), Positives = 308/687 (44%), Gaps = 69/687 (10%)
Query: 462 QIYYSSINFRDIMLTTAKL-----APEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTS 516
++ + +NF D++ A VI + IG E G + G+RV+
Sbjct: 1490 RVVAAGLNFSDVLKAMGVYPGLDGAAPVIGGECVGYVTAIGDEVDGV--EVGQRVIAFGP 1547
Query: 517 GRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSG 576
G + T ++ IPD +AAT Y TA +++ G++ GE +LIH+ +G
Sbjct: 1548 G-TFGTHLGTIADLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATG 1606
Query: 577 GVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKG 636
GVG AA+++A+ + A I+TT G+ KRE + + + E +G+SR F +++ T G
Sbjct: 1607 GVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----LGVEYVGDSRSVDFADEILELTDG 1662
Query: 637 RGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLD- 695
GVD+VLNSLA E +Q V+ LA GGRF+E+GK D+ + LG+ + SF V LD
Sbjct: 1663 YGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDL 1722
Query: 696 NFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIR 755
N ++ LQ LQ D G ++ L T F +AFR MA+GKH GK++I I
Sbjct: 1723 NLKLQPARYRQLLQHILQHVAD-GKLEVLPVTAFSLHDAADAFRLMASGKHTGKIVISIP 1781
Query: 756 DEEPTK-ICTPKVKQLLAVPRYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSR 814
+ I P P + Y+I GG+GG G +A WL +GA +VL R
Sbjct: 1782 QHGSIEAIAAPP-------PLPLVSRDGGYLIVGGMGGLGFVVARWLAEQGAGLIVLNGR 1834
Query: 815 SGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG-PVDGIFNLAVVLK 873
S + A I + ++ + T DIT L+ G + G+ + A+VL
Sbjct: 1835 SAPSDEVAAA-IAELNASGSRIEVITGDITEPDTAERLVRAVEDAGFRLAGVVHSAMVLA 1893
Query: 874 DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGM 933
D + N T PK T + + T + ++ FSS + G GQ Y
Sbjct: 1894 DEIVLNMTDSAARRVFAPK--VTGSWRLHVATAARDVDWWLTFSSAAALLGTPGQGAYAA 1951
Query: 934 ANSIMERICEARRAEGLPGLAVEWGAVGEVG-------LVADM--AEDNLEVVIGGTLQQ 984
ANS ++ + RR+ GLP + + WG +VG L +M AE L +
Sbjct: 1952 ANSWVDGLVAHRRSAGLPAVGINWGPWADVGRAQFFKDLGVEMINAEQGLAAMQAVLTAD 2011
Query: 985 RISNCLECLN-EFLIQSEPIVASMVV-------AEKKAG---SGG--------------- 1018
R + L+ QS P VA + A +K+G GG
Sbjct: 2012 RGRTGVFSLDARQWFQSFPAVAGSSLFAKLHDSAARKSGQRRGGGAIRAQLDALDAAERP 2071
Query: 1019 ---ATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIR 1075
A+ I D + + LR + H L LG+DS+M +E++ LE + L +
Sbjct: 2072 GHLASAIADEIRAV--LRSGDPIDHHRPLETLGLDSLMGLELRNRLEASLGITLPVALV- 2128
Query: 1076 GLTFAKLQDIAVSF-ENDDKSKPVSTE 1101
+ + D+A + E D + P + +
Sbjct: 2129 -WAYPTISDLATALCERMDYATPAAAQ 2154
|
Involved in the elongation of either C22-24 fatty acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol derivatives. Mycobacterium tuberculosis (taxid: 1773) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q7TXL8|PPSC_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsC OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ppsC PE=1 SV=1 | Back alignment and function description |
|---|
Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 198/687 (28%), Positives = 308/687 (44%), Gaps = 69/687 (10%)
Query: 462 QIYYSSINFRDIMLTTAKL-----APEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTS 516
++ + +NF D++ A VI + IG E G + G+RV+
Sbjct: 1490 RVVAAGLNFSDVLKAMGVYPGLDGAAPVIGGECVGYVTAIGDEVDGV--EVGQRVIAFGP 1547
Query: 517 GRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSG 576
G + T ++ IPD +AAT Y TA +++ G++ GE +LIH+ +G
Sbjct: 1548 G-TFGTHLGTIADLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATG 1606
Query: 577 GVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKG 636
GVG AA+++A+ + A I+TT G+ KRE + + + E +G+SR F +++ T G
Sbjct: 1607 GVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----LGVEYVGDSRSVDFADEILELTDG 1662
Query: 637 RGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLD- 695
GVD+VLNSLA E +Q V+ LA GGRF+E+GK D+ + LG+ + SF V LD
Sbjct: 1663 YGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDL 1722
Query: 696 NFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIR 755
N ++ LQ LQ D G ++ L T F +AFR MA+GKH GK++I I
Sbjct: 1723 NLKLQPARYRQLLQHILQHVAD-GKLEVLPVTAFSLHDAADAFRLMASGKHTGKIVISIP 1781
Query: 756 DEEPTK-ICTPKVKQLLAVPRYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSR 814
+ I P P + Y+I GG+GG G +A WL +GA +VL R
Sbjct: 1782 QHGSIEAIAAPP-------PLPLVSRDGGYLIVGGMGGLGFVVARWLAEQGAGLIVLNGR 1834
Query: 815 SGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG-PVDGIFNLAVVLK 873
S + A I + ++ + T DIT L+ G + G+ + A+VL
Sbjct: 1835 SAPSDEVAAA-IAELNASGSRIEVITGDITEPDTAERLVRAVEDAGFRLAGVVHSAMVLA 1893
Query: 874 DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGM 933
D + N T PK T + + T + ++ FSS + G GQ Y
Sbjct: 1894 DEIVLNMTDSAARRVFAPK--VTGSWRLHVATAARDVDWWLTFSSAAALLGTPGQGAYAA 1951
Query: 934 ANSIMERICEARRAEGLPGLAVEWGAVGEVG-------LVADM--AEDNLEVVIGGTLQQ 984
ANS ++ + RR+ GLP + + WG +VG L +M AE L +
Sbjct: 1952 ANSWVDGLVAHRRSAGLPAVGINWGPWADVGRAQFFKDLGVEMINAEQGLAAMQAVLTAD 2011
Query: 985 RISNCLECLN-EFLIQSEPIVASMVV-------AEKKAG---SGG--------------- 1018
R + L+ QS P VA + A +K+G GG
Sbjct: 2012 RGRTGVFSLDARQWFQSFPAVAGSSLFAKLHDSAARKSGQRRGGGAIRAQLDALDAAERP 2071
Query: 1019 ---ATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIR 1075
A+ I D + + LR + H L LG+DS+M +E++ LE + L +
Sbjct: 2072 GHLASAIADEIRAV--LRSGDPIDHHRPLETLGLDSLMGLELRNRLEASLGITLPVALV- 2128
Query: 1076 GLTFAKLQDIAVSF-ENDDKSKPVSTE 1101
+ + D+A + E D + P + +
Sbjct: 2129 -WAYPTISDLATALCERMDYATPAAAQ 2154
|
Involved in the elongation of either C22-24 fatty acids or p-hydroxyphenylalkanoic acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol and phenolphthiocerol derivatives, respectively. Mycobacterium bovis (taxid: 1765) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|B2HIL7|MSL7_MYCMM Phenolphthiocerol synthesis polyketide synthase type I Pks15/1 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=pks15/1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 154/504 (30%), Positives = 244/504 (48%), Gaps = 55/504 (10%)
Query: 469 NFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLAN------ 522
NFRD++ E +G E +G + + G +V G+ G S+
Sbjct: 1432 NFRDVVAALGMYPGEAPP---------LGAEGAGVVLEVGPQVSGVAVGDSVMGFLGGAG 1482
Query: 523 -CCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQA 581
D ++ +P W+ AA VP V+ TA++ + ++Q GES+LIHAG+GGVG A
Sbjct: 1483 PLSVVDQQLITRMPQGWSFAQAAAVPVVFLTALFGLQDLAKIQPGESVLIHAGTGGVGMA 1542
Query: 582 AINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDL 641
A+ LAR+ EIF T + K + +R +++IG+SR FE+ + T GRGVD+
Sbjct: 1543 AVQLARHWGVEIFVTA-SRGKWDTLRAM--GFDDDHIGDSRTLDFEEKFLAVTDGRGVDV 1599
Query: 642 VLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAE 701
VL+SLA + + AS+R L +GGRFLE+GK D+ + + + ++ GV F +E
Sbjct: 1600 VLDSLAGDFVDASLRLLVRGGRFLEMGKTDIRDADKI-------AANYPGVWYRAFDLSE 1652
Query: 702 QEWKMSLQKAL---QKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEE 758
+ +Q+ L ++ D + L T + AFR+M+ +HIGKV+
Sbjct: 1653 AG-PVRMQEMLAEVRELFDTAVLHRLPVTTWDVRCAPAAFRFMSQARHIGKVV------- 1704
Query: 759 PTKICTPKVKQLLAVPRYYAD--SNKSYIICGGLGGFGLELADWLV-LRGARKLVLTSRS 815
L +P AD ++ + +I G G G LA ++ G R LVL SR
Sbjct: 1705 ------------LTMPSALADGLADATVLITGATGAVGAVLARHMLDAYGVRHLVLASRR 1752
Query: 816 GVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE-ANKLGPVDGIFNLAVVLKD 874
G + A V + D+ V +L + + PV G+ + A VL D
Sbjct: 1753 GDRAEGAAELAAELSEAGANVQVVACDVADRDAVEAMLARLSGEYPPVRGVIHAAGVLDD 1812
Query: 875 ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934
A+ + TPE + L K +A ++ + T+ L FV+ SS++ G+ GQ NY A
Sbjct: 1813 AVISSLTPERIDTVLRAKVDAA--WNLHEATLDLDLSMFVLCSSIAATVGSPGQGNYSAA 1870
Query: 935 NSIMERICEARRAEGLPGLAVEWG 958
NS ++ + R+A GL G++V WG
Sbjct: 1871 NSFLDGLAAHRQAAGLAGISVAWG 1894
|
Catalyzes the elongation by iterative transfer of p-hydroxybenzoyl group from FadD22 (pHBA-S-FAdD22) to form p-hydroxyphenylalkanoate (pHPA) intermediates during phenolphthiocerol (PPOL) biosynthesis. PPOL is an important intermediate in the biosynthesis of phenolic glycolipid (mycosid B). Mycobacterium marinum (strain ATCC BAA-535 / M) (taxid: 216594) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q02251|MCAS_MYCBO Mycocerosic acid synthase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=mas PE=1 SV=2 | Back alignment and function description |
|---|
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 173/552 (31%), Positives = 267/552 (48%), Gaps = 36/552 (6%)
Query: 442 PVNMKTWKKYSKDNINHDIAQI----YYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIG 497
P +++T + + D + QI SSINF D+++ + +I+ R +G
Sbjct: 1428 PGDLQTLEFVASDRVPPGPGQIEVAVSMSSINFADVLIAFGRF--PIIDDREPQ----LG 1481
Query: 498 FEYSGRL---------RDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPC 548
++ G + G RV G + G D +A +P T E A T
Sbjct: 1482 MDFVGVVTAVGEGVTGHQVGDRVGGFSEGGCWRTFLTCDANLAVTLPPGLTDEQAITAAT 1541
Query: 549 VYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRK 608
+ATA Y + Q++ G+ +LIH+ +GGVGQAAI++AR AEIF T G P KR +R
Sbjct: 1542 AHATAWYGLNDLAQIKAGDKVLIHSATGGVGQAAISIARAKGAEIFATAGNPAKRAMLRD 1601
Query: 609 TFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIG 668
+ E++ +SR F + + + T G GVD+VLNSL +A + LA GGRF+EIG
Sbjct: 1602 ----MGVEHVYDSRSVEFAEQIRRDTDGYGVDIVLNSLTGAAQRAGLELLAFGGRFVEIG 1657
Query: 669 KFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTI 728
K D+ N LG+ F R +F+ + L + + L + K G + T
Sbjct: 1658 KADVYGNTRLGLFPFRRGLTFYYLDLALMSVTQPDRVRELLATVFKLTADGVLTAPQCTH 1717
Query: 729 FPEDKVEEAFRYMAAGKHIGKVIIKI-RDEEPTKICTPKVKQLLAVPRYYADSNKSYIIC 787
+P + +A R M+ +H GK+++ + R + TP+ P Y D SYII
Sbjct: 1718 YPLAEAADAIRAMSNAEHTGKLVLDVPRSGRRSVAVTPE-----QAPLYRRDG--SYIIT 1770
Query: 788 GGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEA 847
GGLGG GL A L G ++VLT+RS N I+ ++ +++ +I
Sbjct: 1771 GGLGGLGLFFASKLAAAGCGRIVLTARS-QPNPKARQTIEGLRAAGADIVVECGNIAEPD 1829
Query: 848 GVVNLLTEANKLG-PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTM 906
L++ A G P+ G+ + A V++DA N T E + PK + ++ + T+
Sbjct: 1830 TADRLVSAATATGLPLRGVLHSAAVVEDATLTNITDELIDRDWSPKVFGS--WNLHRATL 1887
Query: 907 CPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGAVGEVGLV 966
L F +FSS + G+ GQ Y ANS ++ RRA+GLP A+ WGA GEVG
Sbjct: 1888 GQPLDWFCLFSSGAALLGSPGQGAYAAANSWVDVFAHWRRAQGLPVSAIAWGAWGEVGRA 1947
Query: 967 ADMAEDNLEVVI 978
+AE E++I
Sbjct: 1948 TFLAEGG-EIMI 1958
|
Catalyzes the elongation of N-fatty acyl-CoA with methylamalonyl-CoA (not malonyl-CoA) as the elongating agent to form mycocerosyl lipids. Mycobacterium bovis (taxid: 1765) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 1 EC: 1 |
| >sp|Q54FI3|PKS37_DICDI Probable polyketide synthase 37 OS=Dictyostelium discoideum GN=stlB PE=2 SV=1 | Back alignment and function description |
|---|
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 158/560 (28%), Positives = 262/560 (46%), Gaps = 63/560 (11%)
Query: 460 IAQIYYSSINFRDIMLTTAK-LAPEVIESRRLYQHCVIGFEYSGRLRD---------SGK 509
+ ++ ++NFRDI+ + + P + S +G E+SG++ + G+
Sbjct: 1739 LVRVEMCTLNFRDILKSLGRDYDPIHLNS--------MGDEFSGKVIEIGEGVNNLSVGQ 1790
Query: 510 RVMGLTSGRSLAN--CCETDVEMAW-------------EIPDQWT----LEDAATVPCVY 550
V G+ +S+ + CC +D+ I DQ L T+P V+
Sbjct: 1791 YVFGINMSKSMGSFVCCNSDLVFPIPIPTPSSSSSSNENIDDQEIISKLLNQYCTIPIVF 1850
Query: 551 ATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTF 610
T+ Y++ I G+++KGE ILIH+G GGVG A I ++ + AEI TVG+ EK++++ K F
Sbjct: 1851 LTSWYSIVIQGRLKKGEKILIHSGCGGVGLATIQISMMIGAEIHVTVGSNEKKQYLIKEF 1910
Query: 611 PFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKF 670
I E+ I +SR F +M T G+GVD+VLNSL+ E L+ S++CL+Q GRF+EIGK
Sbjct: 1911 G-IDEKRIYSSRSLQFYNDLMVNTDGQGVDMVLNSLSGEYLEKSIQCLSQYGRFIEIGKK 1969
Query: 671 DLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQ-KALQKAIDAGAVQPLVRTIF 729
D+ +N+ + +E F SF V + +++ + L G+++PL + F
Sbjct: 1970 DIYSNSSIHLEPFKNNLSFFAVDIAQMTENRRDYLREIMIDQLLPCFKNGSLKPLNQHCF 2029
Query: 730 --PEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQLLAVPRYYADSNKSYIIC 787
P D V +A R+M++G HIGK++I + K ++ +P + SN+S I
Sbjct: 2030 NSPCDLV-KAIRFMSSGNHIGKILINWSNLNNDKQFINH-HSVVHLP-IQSFSNRSTYIF 2086
Query: 788 GGLGGFGLELADW---------LVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLI 838
G GG L + +++ L S SG N + I K + VL+
Sbjct: 2087 TGFGGLTQTLLKYFSTESDLTNVIIVSKNGLDDNSGSGSGNNEKLKLINQLKESGLNVLV 2146
Query: 839 STDDITTEAGVVNLL----------TEANKLGPVDGIFNLAVVLKDALFENQTPEDFNAS 888
D+++ V L +++ + GIF+ A ++ D E FN
Sbjct: 2147 EKCDLSSIKQVYKLFNKIFDNDASGSDSGDFSDIKGIFHFASLINDKRILKHNLESFNYV 2206
Query: 889 LGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAE 948
KA + + S L F SV GN GQ+NY AN +E + R
Sbjct: 2207 YNSKATSAWNLHQVSLKYNLNLDHFQTIGSVITILGNIGQSNYTCANRFVEGLTHLRIGM 2266
Query: 949 GLPGLAVEWGAVGEVGLVAD 968
GL + ++ +VG+ ++
Sbjct: 2267 GLKSSCIHLASIPDVGMASN 2286
|
Does make the polyketide skeleton of dif-1. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1392 | ||||||
| 328721179 | 2404 | PREDICTED: fatty acid synthase-like [Acy | 0.765 | 0.443 | 0.554 | 0.0 | |
| 242018452 | 2428 | fatty acid synthase, putative [Pediculus | 0.753 | 0.432 | 0.498 | 0.0 | |
| 156549724 | 3088 | PREDICTED: fatty acid synthase-like [Nas | 0.744 | 0.335 | 0.492 | 0.0 | |
| 156549726 | 2406 | PREDICTED: fatty acid synthase-like [Nas | 0.744 | 0.431 | 0.490 | 0.0 | |
| 357631736 | 2420 | p270 [Danaus plexippus] | 0.781 | 0.449 | 0.456 | 0.0 | |
| 112984340 | 2422 | p270 [Bombyx mori] gi|2058460|gb|AAB5325 | 0.736 | 0.423 | 0.472 | 0.0 | |
| 307213875 | 2408 | Fatty acid synthase [Harpegnathos saltat | 0.741 | 0.428 | 0.479 | 0.0 | |
| 157118100 | 2385 | fatty acid synthase [Aedes aegypti] gi|1 | 0.749 | 0.437 | 0.455 | 0.0 | |
| 390179170 | 2367 | GA26263 [Drosophila pseudoobscura pseudo | 0.746 | 0.438 | 0.451 | 0.0 | |
| 170044457 | 2386 | fatty acid synthase S-acetyl transferase | 0.75 | 0.437 | 0.453 | 0.0 |
| >gi|328721179|ref|XP_001949072.2| PREDICTED: fatty acid synthase-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 1251 bits (3236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1125 (55%), Positives = 808/1125 (71%), Gaps = 60/1125 (5%)
Query: 293 QNEGLKVKSPVK--ISPLVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGI 350
Q + V+ P++ I P+V+K+S +F W+P+LQK L A++ S QKI+L+ + +P +GI
Sbjct: 1297 QERLMLVRKPLEQNIVPIVVKISSTEFSWLPVLQKLLKADDASVSQKIVLVGEKDPKNGI 1356
Query: 351 IGFFNCIRKETGGERTRCFEILDKNAPPFNPEDPFYKVQVEKDLAVNILRNGQWGTYRHS 410
+G NCIRKE GG+R RC I+DK AP F+ ++P YK Q+ KDL +N+ +N WG+YRH
Sbjct: 1357 VGLLNCIRKEPGGDRVRCVFIMDKCAPIFSLDEPLYKKQLNKDLILNVYKNKVWGSYRHL 1416
Query: 411 ILQPIKRVMTDHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINF 470
+L+P + H+ +N +RGD+SSL W QG + ++K D+ +YY+++NF
Sbjct: 1417 LLEPPSLIEVQHSCVNTSIRGDLSSLKWFQGSI-----VPFTKPPAESDLVHVYYTALNF 1471
Query: 471 RDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEM 530
RDIML TAKLAPEVI R+ Q VIGFEYSGR R++G+R+MG+ + R+L N D +
Sbjct: 1472 RDIMLATAKLAPEVIARGRINQESVIGFEYSGR-RENGERIMGMITSRALTNILVHDKYL 1530
Query: 531 AWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMD 590
AW++PD W+LE+AATVP VY T +YA+ + G+M++G+S+LIHAG+GGVGQAAI +A Y +
Sbjct: 1531 AWKVPDSWSLEEAATVPVVYGTVIYALIVSGRMKRGDSVLIHAGTGGVGQAAITIALYYE 1590
Query: 591 AEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEK 650
EIFTTVGT EKREFI+ FP I E +IGNSRD+SFEQ++M T G+GVD+VLNSLAEEK
Sbjct: 1591 CEIFTTVGTAEKREFIKTHFPQIPESHIGNSRDSSFEQMIMMETDGKGVDMVLNSLAEEK 1650
Query: 651 LQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQK 710
L ASVRCLA GGRFLEIGKFDLANN+M+GME+F++E SFHGVMLD F + EWK Q+
Sbjct: 1651 LLASVRCLATGGRFLEIGKFDLANNSMIGMELFLKEISFHGVMLDTLFESPDEWKEVFQR 1710
Query: 711 ALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQL 770
+Q+ ID+GA++PLVRT+F D+VE AFRYMAAGKHIGKV+IKIRDEE + P+ +
Sbjct: 1711 QVQENIDSGAIRPLVRTVFESDQVEPAFRYMAAGKHIGKVLIKIRDEEEDRFIKPRSINV 1770
Query: 771 LAVPRYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK 830
A PR D N S IICGGLGGFGLELADW+VLR +R ++LT+R+G++NGYQALR ++W+
Sbjct: 1771 KAYPRVTFDKNSSCIICGGLGGFGLELADWMVLRNSRNIILTTRTGIRNGYQALRKRVWE 1830
Query: 831 SYDVQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLG 890
SY V+IST DITTE GV LL EANKLGPV IFNLAVVLKDALFENQT EDF AS G
Sbjct: 1831 SYGANVVISTADITTEEGVKQLLNEANKLGPVSTIFNLAVVLKDALFENQTEEDFKASFG 1890
Query: 891 PKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGL 950
PKA AT DKYSRTMCP L FV+FSSVSCGRGNAGQTNYGM+NS+MERICE R +EGL
Sbjct: 1891 PKAIATSLLDKYSRTMCPELKHFVIFSSVSCGRGNAGQTNYGMSNSVMERICEIRHSEGL 1950
Query: 951 PGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQ-SEPIVASMVV 1009
P LAVEWGAVGEVGLVADMAEDN EVVIGGTLQQ+I NCLE L++ L Q + PIV+SMVV
Sbjct: 1951 PALAVEWGAVGEVGLVADMAEDNQEVVIGGTLQQKIGNCLEILDDLLTQKNNPIVSSMVV 2010
Query: 1010 AEKKAGSGGATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFL 1069
AEK+A S A IVD VINILGLRDLKT+SLHSTLAELGMDSMMAVEIKQTLER+FEVFL
Sbjct: 2011 AEKRASSSNAGTIVDTVINILGLRDLKTISLHSTLAELGMDSMMAVEIKQTLERQFEVFL 2070
Query: 1070 TPQDIRGLTFAKLQDIAVSFENDDKSKPVSTEASGGQVTALSVEDIPDVGIQYLMRTIGD 1129
TPQDIR +TFAKLQ+I S DDK K ++ S+ +PDVG+ YL+R IG+
Sbjct: 2071 TPQDIRSMTFAKLQEIGSS---DDKEKKADVDSK-------SIVQVPDVGLGYLIRAIGE 2120
Query: 1130 EILANKPVIRLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQF 1189
E A V+R+PSL +GS VE+P NT+F++PG+EGI+++LEPL++N+N QVL Q+
Sbjct: 2121 ESSAYNSVMRIPSLCEDGSVVEQPTTKLNTLFVIPGLEGISSMLEPLSRNLNMQVLCLQY 2180
Query: 1190 DHTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKCHLY 1249
D TI EMA + ++RL E +VG+SFGG++A+E+ LE+ L+
Sbjct: 2181 DILGTASTIEEMAATHYTLIQERL-SADQEFSIVGYSFGGLIAIEVLKMLEKNNRTGKLW 2239
Query: 1250 LVDSAPDY--------------------------------------VLTSLRKLPDWNAK 1271
L+DSAP + + T L ++ W+ +
Sbjct: 2240 LIDSAPQFLKMTTELAIRGDKAQDQEIQVQLILRFLDLVWPHNKTKITTELYQINSWDER 2299
Query: 1272 LNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQALPT 1331
LNYF++ +P+D +S+ YQ+ L + AY ++ +++ Y + + L+RPTEQ LP
Sbjct: 2300 LNYFIEQVPDDVIYSKIYQKQLLNCAYIKLKALINYDGKPNGSLKTRTLLIRPTEQVLPI 2359
Query: 1332 AEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDSTDFK 1376
+EDYGLS+ V VHFV+GNH+++L+N K A++I S+ FK
Sbjct: 2360 SEDYGLSEYFNSAVMVHFVEGNHYSILENKKVAELI--SQSSSFK 2402
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242018452|ref|XP_002429689.1| fatty acid synthase, putative [Pediculus humanus corporis] gi|212514692|gb|EEB16951.1| fatty acid synthase, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 1033 bits (2670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1124 (49%), Positives = 747/1124 (66%), Gaps = 75/1124 (6%)
Query: 297 LKVKSPVKISPL-----VIKVSGVD-FHWIPILQKALAAEETSTKQKIILLSQLEPLSGI 350
LK KS V+ P V K+S D F WI L+K+L E T I L+S+ E +G+
Sbjct: 1295 LKSKSSVEKVPTNEAIEVFKISEKDEFQWIEPLKKSLTNESVKT---IFLVSEKEENNGL 1351
Query: 351 IGFFNCIRKETGG-ERTRCFEILDKNAPPFNPEDPFYKVQVEKDLAVNILRNGQWGTYRH 409
+GF NCIRKE GG E+ R + DK+AP F+ +P Y Q+EK LAVNI +N +WGTYRH
Sbjct: 1352 LGFVNCIRKEPGGGEKVRGVFVFDKDAPSFDLTNPLYAEQLEKGLAVNIYKNKKWGTYRH 1411
Query: 410 SILQPIKRVMTDHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSIN 469
L + V +H Y N +RGD+SSLT +GP+N+ KY + + IYY++IN
Sbjct: 1412 EALPSNQTVGAEHIYFNTEIRGDLSSLTMYEGPLNVN---KYDDEEV-----IIYYAAIN 1463
Query: 470 FRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVE 529
FRD+ML + KLA + R+ Q IG E+SGR+ SGKRVMG+T +LA+ T
Sbjct: 1464 FRDVMLASGKLAIDAAAKGRINQQLPIGLEFSGRMAKSGKRVMGMTKHGALASKIHTKDV 1523
Query: 530 MAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYM 589
+ WE+P W+LE AA+VP VYAT ++ + G++QKG+S+LIH+G+GGVG AA+ +A Y
Sbjct: 1524 LLWEVPKSWSLEQAASVPIVYATVYTSLVVRGRLQKGDSVLIHSGTGGVGLAALYVATYF 1583
Query: 590 DAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEE 649
+ IFTTVGT EKR+++R +P I E +IGNSRDTSFE ++ + T GRGVD++LNSL+EE
Sbjct: 1584 ECNIFTTVGTQEKRDYLRNLYPGIPESHIGNSRDTSFEDMINRETNGRGVDVILNSLSEE 1643
Query: 650 KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAE-QEWKMSL 708
KLQAS+RCLA+GGRFLEIGKFDL+N+N + ME+F+++TSFHGV LD +++ Q ++ +
Sbjct: 1644 KLQASMRCLAKGGRFLEIGKFDLSNDNPIEMEIFLKDTSFHGVHLDGLLYSKNQNKRLEV 1703
Query: 709 QKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVK 768
+ L + + PL T++ + E+AFRY+ GKHIGKV++K+RDEEP + P+ K
Sbjct: 1704 RDLLGDVLKKARIAPLKTTVYDFTECEQAFRYLTTGKHIGKVMLKMRDEEPVDVMVPEPK 1763
Query: 769 QLLAVPRYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKI 828
AVP+ KSY+I GGLGGFGLELADWLV+RGARKLVLTSRSG+K GYQALRI++
Sbjct: 1764 LFDAVPQVCCSHTKSYVILGGLGGFGLELADWLVMRGARKLVLTSRSGLKTGYQALRIRL 1823
Query: 829 WKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNAS 888
+K+Y V+V+IST+D+TTE GV NLL A KLGPVD IFNLAVVL+DA+FENQT E FN S
Sbjct: 1824 FKTYGVEVIISTEDVTTEQGVTNLLKSAEKLGPVDAIFNLAVVLRDAIFENQTDEAFNVS 1883
Query: 889 LGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAE 948
GPKA ATK+ DK SR +CP L FV+FSSVSCGRGNAGQTNYGMANS+MERICE R E
Sbjct: 1884 FGPKAVATKHLDKVSRQLCPALQYFVIFSSVSCGRGNAGQTNYGMANSVMERICEKRVEE 1943
Query: 949 GLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMV 1008
G PGLA++WGA+GEVGLVA+M ED+ E+VIGGTLQQ I++CL+CL+ FL Q P+VASMV
Sbjct: 1944 GYPGLAIQWGAIGEVGLVAEMQEDHQELVIGGTLQQSIASCLKCLDVFLKQKHPVVASMV 2003
Query: 1009 VAEKKAGSGGATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVF 1068
VAEKKAG G NIVDAV+NILGL+DLKTVSLHS+LAELGMDSMMAVEIKQTLEREF+V+
Sbjct: 2004 VAEKKAGGSGGGNIVDAVVNILGLQDLKTVSLHSSLAELGMDSMMAVEIKQTLEREFDVY 2063
Query: 1069 LTPQDIRGLTFAKLQDIA-VSFENDDKSKPVSTEASGGQVTALSVEDIPDVGIQYLMRTI 1127
LT QDIRGLTFAKL+ +A S E +K + + + + +V L + + L R I
Sbjct: 2064 LTAQDIRGLTFAKLKQLADNSAEGGEKGEMIPIQET--EVKRLEHQ-------RLLFRLI 2114
Query: 1128 GDEILANKPVIRLPSLKNNGSTVEEPV----GNNNTIFMVPGIEGIATVLEPLAKNINAQ 1183
DE A K +++L + + N +EE + G IF +PG EG+A+VLEPLA +N
Sbjct: 2115 ADEETATKSMMKLKTGQMN-EGLEEKLKSLHGKVPPIFFIPGFEGVASVLEPLALKVNCP 2173
Query: 1184 VLVFQFDHTNPPD-TIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQL 1242
++ QF + + + I +++ +L + +V + +VG+S G + ALE+A +LE+
Sbjct: 2174 IVALQFPYNDSINANITDISKRMLKDVRAHMVP-SFPFFIVGYSTGSLTALEIARELEKE 2232
Query: 1243 GTKCHLYLVDSAPDY-------------------------------------VLTSLRKL 1265
G K + L+D APDY + L L
Sbjct: 2233 GYKGVVVLLDGAPDYLKKIVSTVFGDLEDLNSLDSNLLHAIYNLFVPGTNIKIRDELNTL 2292
Query: 1266 PDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPT 1325
W KL Y ++PE + +Q+ + + R+T+++KY K + I L+RP
Sbjct: 2293 KTWEDKLAYMEKVIPEQVLDRKEHQKRITNDFRHRLTAVIKYDASKCEKLSSKIILIRPV 2352
Query: 1326 EQALPT--AEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQII 1367
EQ LP EDY LS + K P V+F +GNH ++LD K +I
Sbjct: 2353 EQFLPAILPEDYNLSLLFKNPADVYFAEGNHLSMLDASKVGNVI 2396
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156549724|ref|XP_001605685.1| PREDICTED: fatty acid synthase-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 1031 bits (2665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1124 (49%), Positives = 741/1124 (65%), Gaps = 88/1124 (7%)
Query: 308 LVIKVSGVDFHWIPILQKALAAE---ETSTKQKIILLSQLEPLSGIIGFFNCIRKETGGE 364
LVI +S F W+ ++K + E E +I+ +SQ + +G++G+ NC+RKE GGE
Sbjct: 1991 LVINISNDRFDWVDEMKKIMKEELEKENPGNTRILYVSQGDFENGLVGYINCLRKEPGGE 2050
Query: 365 RTRCFEILDKNAPPFNPEDPFYKVQVEKDLAVNILR-NGQWGTYRHSILQPIKRVMTDHA 423
R I D AP F+ +DP Y +++KDLAV++LR NG WG+YRH L P++ HA
Sbjct: 2051 IVRGILIQDPKAPKFSLQDPLYTKELQKDLAVSVLRPNGVWGSYRHLPLPPLEPKPVRHA 2110
Query: 424 YINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPE 483
+ N +VRGD++SL+W +GP+ + + D D+ + YSSINFRD+ML T KLA E
Sbjct: 2111 WANQIVRGDLNSLSWLEGPIPLG----FQSD----DLVTVVYSSINFRDVMLATGKLAVE 2162
Query: 484 VIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDA 543
V+ R Q CV+GFEY G + G+R+MG+ +++ N C D +++W+IP+ W+LEDA
Sbjct: 2163 VVAKTRQAQECVLGFEYCG-ITSKGRRIMGMIDNKAMTNLCICDPDLSWDIPESWSLEDA 2221
Query: 544 ATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKR 603
ATVPCVY T YA+++ G+M+KG+ +LIHAG+GGVGQAAI LA + E+FTTVGTPEKR
Sbjct: 2222 ATVPCVYGTCYYALYLSGKMKKGDKVLIHAGTGGVGQAAITLALFEGCEVFTTVGTPEKR 2281
Query: 604 EFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGR 663
FI + FP I E++IGNSRDTSFEQ+++++T GRGVD+VLNSLAEEKLQASVRCLA GG
Sbjct: 2282 RFILENFPQIPEDHIGNSRDTSFEQMILRQTNGRGVDIVLNSLAEEKLQASVRCLANGGH 2341
Query: 664 FLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP 723
FLEIGKFDLA NN LGME F++E SFHG+MLDN F A K L+ + K + GA++P
Sbjct: 2342 FLEIGKFDLAANNPLGMECFLKEISFHGIMLDNLFNATSTQKRGLRDMMSKGLKNGAIKP 2401
Query: 724 LVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEE--PTKICTPKVKQLLAVPRYYADSN 781
L RT+FP+D++E AFRYMAAGKHIGKVIIK+RDE+ P ++ +LA+PR+Y +
Sbjct: 2402 LTRTVFPKDQIEAAFRYMAAGKHIGKVIIKVRDEKESPNEL-------MLALPRFYCLPD 2454
Query: 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTD 841
+SYII GGLGGFGLELADWLVLRGA+ LV+TSR+G++NGYQ +RI++W+ Y V+I D
Sbjct: 2455 RSYIIFGGLGGFGLELADWLVLRGAKNLVITSRTGIRNGYQKMRIELWRGYGTNVVIVAD 2514
Query: 842 -DITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFD 900
D + +++ A KL PVD IFNLAVVLKDA+++NQTPE F S KA +TK+ D
Sbjct: 2515 KDASKRDECQSIIETAAKLAPVDAIFNLAVVLKDAVWDNQTPETFEESFKAKAWSTKHLD 2574
Query: 901 KYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGAV 960
+R +CP L QFVVFSSVSCGRGNAGQTNYGM+NS+MERICE R EGLPGLAV+WGA+
Sbjct: 2575 VLTRKLCPKLRQFVVFSSVSCGRGNAGQTNYGMSNSVMERICERRATEGLPGLAVQWGAI 2634
Query: 961 GEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKKAGSGGAT 1020
G+VGLVADM EDN E+VIGGTLQQRIS+CL+ L+ FL Q+ PIV+SMVVAEK+AG GA
Sbjct: 2635 GDVGLVADMQEDNKELVIGGTLQQRISSCLQELDGFLRQNSPIVSSMVVAEKRAGGSGAL 2694
Query: 1021 NIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIRGLTFA 1080
N+VD V+NI+GL+DLKTVS H++LAELGMDSMMAVEIKQTLEREFE+FLT QDIRGL FA
Sbjct: 2695 NVVDTVLNIMGLKDLKTVSPHTSLAELGMDSMMAVEIKQTLEREFEIFLTAQDIRGLNFA 2754
Query: 1081 KLQDIAVSFENDDKSKPVSTEASGGQVTALSVEDIPDVGIQYLMRTIGDEILANKPVIRL 1140
KLQ++ + +K + + G+V L+ G++ L+R +GD++ + +L
Sbjct: 2755 KLQEMQSKDADSNKKR---GGGADGEVEILT-------GMKLLVRIVGDQVPNPQTCYQL 2804
Query: 1141 PSLKNNGSTVEEPVGNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD-HTNPPDTIP 1199
+ KN + IF++PGIEG+ TV LA I A Q N +I
Sbjct: 2805 ET-KNE---------ERSEIFLIPGIEGVGTVFNNLAPKIKAPASCLQLGVENNEEKSID 2854
Query: 1200 EMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKCHLYLVDSAPDY-- 1257
MAD LLPH +R D +VG+S G +VA+EL +LE G L L+D APD
Sbjct: 2855 AMADKLLPHILERSKDRRD-FTVVGYSVGSLVAIELVRRLEARGMSGKLILLDGAPDMLK 2913
Query: 1258 ----------------------------------VLTSLRKLPDWNAKLNYFLDLMPEDA 1283
++ L K W+ KL FL + +
Sbjct: 2914 LLQSQQLASNSDEELQSNVLLGMMDILSPSSSAELVVELEKTSGWDNKLQVFLARVSDHL 2973
Query: 1284 TH---SRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQALPTA-EDYGLSK 1339
++ +L + Y R+ ++ Y I LL+PT L + EDYGL
Sbjct: 2974 GEFGWTKEGAASLCTSIYNRLIAVHDYDVSTLSPLKTPIVLLKPTAPTLRSVDEDYGLGT 3033
Query: 1340 VCKKPVKVHFVDGNHFTVLDNIKSAQIIMH---EDSTDFKTALF 1380
+ K+ V++H+++GNH T+L+N K A +I ED+ +FK +
Sbjct: 3034 ITKEKVEIHYIEGNHATILENNKLAMVINGEPIEDADEFKAQIM 3077
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156549726|ref|XP_001605700.1| PREDICTED: fatty acid synthase-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 1003 bits (2592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/1123 (49%), Positives = 727/1123 (64%), Gaps = 86/1123 (7%)
Query: 308 LVIKVSGVDFHWIPILQKALAAE---ETSTKQKIILLSQLEPLSGIIGFFNCIRKETGGE 364
+VIKV F W+ +++ ++AE ET+T KII + Q + +G++G NC+++E GGE
Sbjct: 1317 VVIKVDNDKFDWVDKMRETMSAELEKETATNTKIIFVGQGDFENGLMGLINCLKQEPGGE 1376
Query: 365 RTRCFEILDKNAPPFNPEDPFYKVQVEKDLAVNILR-NGQWGTYRHSILQPIKRVMTDHA 423
R I D AP F+ + Y Q+EKDLAV +LR NG WG+YRH L P++ T H
Sbjct: 1377 IVRGILIQDPKAPEFSVRNSLYAKQLEKDLAVCVLRENGVWGSYRHLPLPPLEAKPTQHI 1436
Query: 424 YINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPE 483
++N VRGD+SSL W +GP+ ++ N D+ I+YS+INF+D+ML T KLA E
Sbjct: 1437 WLNQTVRGDLSSLKWFEGPIR--------PEDKNKDLVHIFYSAINFKDVMLATGKLAAE 1488
Query: 484 VIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDA 543
+ R Q C++GFEYSG + GKR+MGL R +AN D ++W+IPD+W+LE+A
Sbjct: 1489 LAAKTRQTQECILGFEYSG-IDAGGKRIMGLLPSRCMANLVLADRYLSWQIPDKWSLEEA 1547
Query: 544 ATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKR 603
ATVP +Y T +YA++ G M+KG++ILIHAG+GG+GQAAI LA + EIFTTVGTPEKR
Sbjct: 1548 ATVPAIYGTCLYALYTKGGMKKGDTILIHAGTGGIGQAAIYLALHEGCEIFTTVGTPEKR 1607
Query: 604 EFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGR 663
+FI K FP I E++IGNSRDTSFEQ+VM +TKGRGVD++LNSLAEEKL ASV CLA GGR
Sbjct: 1608 QFISKHFPQIPEDHIGNSRDTSFEQMVMDKTKGRGVDIILNSLAEEKLLASVACLAWGGR 1667
Query: 664 FLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP 723
FLEIGKFDL+ +N LGME F++E SF GVMLD F A E K+ L + + + GA++P
Sbjct: 1668 FLEIGKFDLSADNPLGMECFLKEVSFQGVMLDRVFDAPDEDKVFLTDLMNEKLKKGAIKP 1727
Query: 724 LVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQLL-AVPRYYADSNK 782
LVRT+FP+++ EEAFRYMAAGKHIGKV+IKIRDE+ T + +L A+PR+Y N+
Sbjct: 1728 LVRTVFPKEEAEEAFRYMAAGKHIGKVLIKIRDEKET------IDKLSPAIPRFYCPPNR 1781
Query: 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQ-VLISTD 841
SY+I GGLGGFGLELADWLVLRGA+ LV+TSR G++NGYQ LRI +WKSY V V+I+
Sbjct: 1782 SYVILGGLGGFGLELADWLVLRGAKYLVMTSRVGIRNGYQKLRIDLWKSYGVNVVVIAGK 1841
Query: 842 DITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDK 901
+ + +L A K+ PVDG+FNLAVVLKDAL++NQTPE F S KA ATK+ D
Sbjct: 1842 EASNRKDCQAILETAAKIAPVDGVFNLAVVLKDALWDNQTPESFEESFRSKAWATKHLDV 1901
Query: 902 YSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGAVG 961
+R +CP L FVVFSSVSCGRGNAGQ+NYGM+NS+MERICE R EGLPGLAV+WGAVG
Sbjct: 1902 LTRKVCPVLRHFVVFSSVSCGRGNAGQSNYGMSNSVMERICERRANEGLPGLAVQWGAVG 1961
Query: 962 EVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKKAGSGGATN 1021
+VGLVADM EDN E+VIGGTLQQRI++CL+ L FL Q P+V+SMVVAEKK G GA +
Sbjct: 1962 DVGLVADMQEDNKELVIGGTLQQRITSCLQELEGFLQQKRPVVSSMVVAEKKTGGEGALS 2021
Query: 1022 IVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIRGLTFAK 1081
+VD V+NI+GL+DLK VSL+++LAELGMDSMM+VEIKQTLEREFE+FL QDIRGL F K
Sbjct: 2022 LVDTVLNIMGLKDLKGVSLNTSLAELGMDSMMSVEIKQTLEREFEIFLAAQDIRGLNFTK 2081
Query: 1082 LQDIAVSFENDDKSKPVSTEASGGQVTALSVEDIPDVGIQYLMRTIGDEILAN-KPVIRL 1140
LQ+++ E ++ G L+ G++ +++ IG+ I N +P ++L
Sbjct: 2082 LQEMSEVEEKAAETVADKIVTENGDSDILT-------GMRLVLKVIGNNINQNSEPCLKL 2134
Query: 1141 PSLKNNGSTVEEPVGNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQF---DHTNPPDT 1197
+ + G +E F++PG+E + V PLA + + Q DH + T
Sbjct: 2135 CTREEQGR-IES--------FLIPGVESVGQVFIPLAPKLRSPTNCLQLGVSDHRH--KT 2183
Query: 1198 IPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKCHLYLVDSAP-- 1255
EMAD LP+ ++ + + G+SFG ++A+EL KLE G L L+D AP
Sbjct: 2184 AFEMADYFLPYVLEK--SKDSKFLITGYSFGSLIAIELVRKLEAKGLTGQLILIDGAPYQ 2241
Query: 1256 ----------------------------------DYVLTSLRKLPDWNAKLNYFLDLM-P 1280
+ L K W KL F L P
Sbjct: 2242 LKAIQVHQMKGTTKADLENLALSEIMHVTSPTASSQLTVGLEKCSTWEDKLQLFTKLCPP 2301
Query: 1281 EDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQALP-TAEDYGLSK 1339
E + +Q++ A Y R+ +I++Y K ITLL+PT + EDYGLSK
Sbjct: 2302 EQLDVTEQFQKDFCTAIYVRVAAIIEYDVSKLAPIKSPITLLKPTAPTIRLDLEDYGLSK 2361
Query: 1340 VCKKPVKVHFVDGNHFTVLDNIKSAQIIMH---EDSTDFKTAL 1379
+ V +H++ GNH T+LDN A +I ED FK L
Sbjct: 2362 ITSGKVSIHYIPGNHVTMLDNDNVAYVINGEPIEDPRSFKAEL 2404
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|357631736|gb|EHJ79205.1| p270 [Danaus plexippus] | Back alignment and taxonomy information |
|---|
Score = 988 bits (2555), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/1161 (45%), Positives = 734/1161 (63%), Gaps = 73/1161 (6%)
Query: 258 EVIKSGGVEIRGLKASAIPRKKPLGEPVLEKYKF----IQNEGLK----VKSPVKISPL- 308
EV+K +R K I R+K L P KF IQ+ G++ + + P
Sbjct: 1252 EVLKPALSTLRD-KGFLISREKDLINPKDFSDKFDIISIQDTGVEYLVLFRKRIGAKPAK 1310
Query: 309 VIKVSGVD--FHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCIRKETGGERT 366
IK+ D + WI ++ EE QK++L ++ EP++G++G NC+R+E GGE
Sbjct: 1311 FIKIVTTDDTYSWIDKVK-----EELKVGQKLVLYNEDEPINGLLGLVNCLRREPGGEVV 1365
Query: 367 RCFEILDKNAPPFNPEDPFYKVQVEKDLAVNILRNGQWGTYRHSILQPIKRVMTDHAYIN 426
I D +AP FNP+ FY+ Q++KD+A+N+ ++GQWGTYRH +L + V HA++N
Sbjct: 1366 HGLLIADPSAPAFNPDLEFYEEQLDKDMALNVYQDGQWGTYRHLLLGDLDVVNAHHAFVN 1425
Query: 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIE 486
GD+S+L W +GP+ T K + H +Y +++NFRD+M ++ + +
Sbjct: 1426 TTTIGDLSTLKWLEGPIRENTVFKDPYSILIH----VYCAALNFRDVMTAMGRVTVDAVA 1481
Query: 487 SRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATV 546
RL Q CV GFE GR + G RVM + +AN E D + W IPD+WT E+AA+V
Sbjct: 1482 RGRLAQECVQGFEVVGRTCN-GSRVMAMVRNSGMANMIEGDKALMWNIPDEWTFEEAASV 1540
Query: 547 PCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFI 606
P Y T YAM + ++Q+GES+LIHAGSGGVGQAAIN+A + E+FTTVGTPEKR FI
Sbjct: 1541 PVAYGTVYYAMVMVARVQRGESVLIHAGSGGVGQAAINVALHYGCEVFTTVGTPEKRAFI 1600
Query: 607 RKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLE 666
+K FP +K+ +IGNSRDTSFE ++ K TKG+GVD+VLNSLA+EKLQASVRCL GRFLE
Sbjct: 1601 KKLFPQLKDSHIGNSRDTSFEDMIRKETKGKGVDIVLNSLADEKLQASVRCLGYRGRFLE 1660
Query: 667 IGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVR 726
IGKFD++NN +GM F++ETSFHG+MLD F E++ SLQ L I++GAV+PL
Sbjct: 1661 IGKFDISNNTPIGMYFFLKETSFHGIMLDFIFDHSYEFRKSLQDLLLSGIESGAVRPLTY 1720
Query: 727 TIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPT-KICTPKVKQLLAVPRYYADSNKSYI 785
F + ++E AFRYMAAGKHIGKVIIKIRDEE + + P ++ A PRY + Y+
Sbjct: 1721 CTFEKHEIEAAFRYMAAGKHIGKVIIKIRDEERSHRPVKPVTLRIPATPRYMCMDDYVYV 1780
Query: 786 ICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITT 845
+ GGLGGFGLEL DWL+LRGAR+++LTSR GV NGYQA R++ W Y V +ST DITT
Sbjct: 1781 VVGGLGGFGLELTDWLILRGARRVLLTSRRGVSNGYQASRLRTWAQYKADVQVSTHDITT 1840
Query: 846 EAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRT 905
E G +L AN +G V+ IFNLAV+LKD++F+NQTPE F S GPKA AT DK SR
Sbjct: 1841 EEGCQKMLEMANSMGKVEAIFNLAVILKDSIFQNQTPETFKISFGPKAKATMNLDKLSRK 1900
Query: 906 MCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGAVGEVGL 965
+CP L FV+FSSVSCGRGNAGQTNYG +NS+MERICE R GLP LAV+WGAVG+VGL
Sbjct: 1901 LCPGLKDFVIFSSVSCGRGNAGQTNYGYSNSVMERICEWRHKLGLPALAVQWGAVGDVGL 1960
Query: 966 VADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKKAGSGGATNIVDA 1025
VADM ++++++ IGGTLQQRIS+CL L++FL Q IV+S+VVAEKKAG G NIVDA
Sbjct: 1961 VADMQDEDVQLEIGGTLQQRISSCLLSLDKFLKQDAVIVSSIVVAEKKAGGSGCGNIVDA 2020
Query: 1026 VINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIRGLTFAKLQDI 1085
V I+G++DLKTVS +LAELGMDSMMAVEIKQTLEREFE+FLT QDIR LTFA+L ++
Sbjct: 2021 VAQIMGIKDLKTVSQQVSLAELGMDSMMAVEIKQTLEREFEIFLTAQDIRTLTFARLVEL 2080
Query: 1086 AVSFENDDKSKPVSTEASGGQVTALSVEDIPDVGIQYLMRTIGDEILANKPVIRLPSLKN 1145
+ S + ++ +TA G++ +R G+E LA +P I +P++ +
Sbjct: 2081 -TAIREAAASTSATPRSNSSDITA---------GLRTFIRNFGNENLATEPFIYMPTMVS 2130
Query: 1146 NGSTVEEPVGNNNTI-FMVPGIEGIATVLEPLAKNINAQVLVFQFDHTNPPDTIPEMADS 1204
+G+ + V + + FM+PG+EG A + PL K + ++ QF + DT+ ++ +S
Sbjct: 2131 DGTETDVSVHEDEAVMFMLPGLEGCAAGMAPLCKRLKIKICALQFGAESGNDTLDDLVNS 2190
Query: 1205 LLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKCHLYLVDSAPDYVLTS--- 1261
L RL+HG I L+G+SFG + +LA LE G ++ +D +P+++ T+
Sbjct: 2191 LHQKITSRLIHGKPYI-LLGYSFGTLPLFKLASILESEGHSGTVFCIDGSPEFLSTTITT 2249
Query: 1262 -----------------------------------LRKLPDWNAKLNYFLDLMPEDATHS 1286
L ++ ++ +++Y + + P ++S
Sbjct: 2250 IAEFRNDKILQNSLICYTIDLVAPNNDVTKNLMEKLHEIESYDERIDYGIKICPVQHSYS 2309
Query: 1287 RTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQALPTAEDYGLSKVCKKPVK 1346
+ R ++ A Y R I ++ + K + LLRP E LP ++YGL K + PV
Sbjct: 2310 HNFIRAMSKACYNRTKMIFEHNENDVKKINAPVILLRPKEIPLPLEDNYGLDKYTEGPVT 2369
Query: 1347 VHFVDGNHFTVLDNIKSAQII 1367
VH+++GNH T+++N A II
Sbjct: 2370 VHYLEGNHVTIIENKDCANII 2390
|
Source: Danaus plexippus Species: Danaus plexippus Genus: Danaus Family: Nymphalidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|112984340|ref|NP_001037478.1| p270 [Bombyx mori] gi|2058460|gb|AAB53258.1| p270 [Bombyx mori] | Back alignment and taxonomy information |
|---|
Score = 981 bits (2536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/1097 (47%), Positives = 706/1097 (64%), Gaps = 72/1097 (6%)
Query: 317 FHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCIRKETGGERTRCFEILDKNA 376
F WI ++ EE QKI+L SQ E ++G++G NC+RKE GGE I D +A
Sbjct: 1321 FAWIDKVK-----EELKEGQKIVLYSQDEHINGLLGLVNCLRKEPGGEIVYGLLINDPSA 1375
Query: 377 PPFNPEDPFYKVQVEKDLAVNILRNGQWGTYRHSILQPIKRVMTDHAYINALVRGDMSSL 436
PPFNP+ FY+ Q++KDLA+N+ ++GQWGTYRH +L + V HAY+N + GD+SSL
Sbjct: 1376 PPFNPDLEFYEEQLDKDLAINVYQDGQWGTYRHLLLGDLDTVKAKHAYVNTITIGDLSSL 1435
Query: 437 TWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVI 496
W +GP+ + N + + +Y +++NFRDIM T ++ + + S RL Q CV
Sbjct: 1436 RWLEGPLR----PNHVFKNPDEILINVYCTALNFRDIMTATGRVTVDAVASGRLAQECVQ 1491
Query: 497 GFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYA 556
GFE GR + G RVMG+ + L+N D + W IPD+WT E+AAT+P Y T YA
Sbjct: 1492 GFEVVGRTAN-GSRVMGMIRNKGLSNLAAGDKALLWSIPDEWTFEEAATIPVAYGTVYYA 1550
Query: 557 MFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEE 616
M + Q+++GESILIHAGSGGVGQAAI++A + E+FTTVGT EKR FI+K FP +K+
Sbjct: 1551 MVMVAQIKRGESILIHAGSGGVGQAAISVALHYGCEVFTTVGTAEKRAFIKKLFPALKDS 1610
Query: 617 NIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNN 676
+IGNSRD +FE +V + T G+GVD+VLNSL++EKLQASVRCL GRFLEIGKFD++NN
Sbjct: 1611 HIGNSRDITFEDMVRRETNGKGVDIVLNSLSDEKLQASVRCLTYRGRFLEIGKFDISNNT 1670
Query: 677 MLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEE 736
+GM F++ETSFHG+MLD F E++ LQ L I GAV+PL F +++VE
Sbjct: 1671 PIGMYFFLKETSFHGIMLDYIFDQSDEFRRGLQDLLLSGIMNGAVRPLTYCTFEKNEVET 1730
Query: 737 AFRYMAAGKHIGKVIIKIRDEEPTK--ICTPKVKQLLAVPRYYADSNKSYIICGGLGGFG 794
AFRYMAAGKHIGKVI+KIRDEEP + P + + A+PRY + N Y++ GGLGGFG
Sbjct: 1731 AFRYMAAGKHIGKVIVKIRDEEPREEGPVRPTIIPVDALPRYICNENNVYVVVGGLGGFG 1790
Query: 795 LELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLT 854
LELADWL+LRGARKLVL SR G+ NGYQ+ R++ W SY ++ IST DITT G ++
Sbjct: 1791 LELADWLILRGARKLVLNSRRGLSNGYQSSRLRAWTSYGAEIHISTHDITTYTGCEEMIK 1850
Query: 855 EANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFV 914
AN LG VD IFNLAVVLKD++F+NQTPE F S GPKA AT + DK ++ +CP L FV
Sbjct: 1851 MANALGHVDAIFNLAVVLKDSIFQNQTPETFKTSFGPKAIATMHLDKVTQKLCPGLKDFV 1910
Query: 915 VFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGAVGEVGLVADMAEDNL 974
+FSSVSCGRGNAGQTNYGM+NS+MERICE+R+ GLP LAV+WGAVG+VGLVADM ++++
Sbjct: 1911 IFSSVSCGRGNAGQTNYGMSNSVMERICESRKKIGLPALAVQWGAVGDVGLVADMQDEDV 1970
Query: 975 EVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKKAGSGGATNIVDAVINILGLRD 1034
++ IGGTLQQRIS+CL L++F+ Q PIV+S+VVAEKKAG G NIVDAV I+G++D
Sbjct: 1971 QLEIGGTLQQRISSCLLALDKFMKQDAPIVSSIVVAEKKAGGTGCGNIVDAVAQIMGIKD 2030
Query: 1035 LKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIRGLTFAKLQDIAVSFE---N 1091
LKTVS +LAELGMDSMMAVEIKQTLEREFE+FLT QDIR LTFA+L ++ E +
Sbjct: 2031 LKTVSQQVSLAELGMDSMMAVEIKQTLEREFEIFLTAQDIRTLTFARLVELTAQREAAAS 2090
Query: 1092 DDKSKPVSTEASGGQVTALSVEDIPDVGIQYLMRTIGDEILANKPVIRLPSLKNNGSTVE 1151
++P++ E + G + L+R GDE LA++P+I +P+L ++G E
Sbjct: 2091 TSAARPITVEGAA--------------GFRVLLRNFGDENLASEPLIYMPTLLSDGVEGE 2136
Query: 1152 EPV-GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTNPPDTIPEMADSLLPHFK 1210
E + +FMVPG+EG A VLEPL + + +V V Q + + + +M D L
Sbjct: 2137 EVIQATERVMFMVPGLEGCAAVLEPLCRRLKTKVCVLQLGVEHKNENLEQMVDRLYQTAI 2196
Query: 1211 KRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKCHLYLVDSAPDY------------- 1257
++ GT L+G+SFG ++ LELA +LE+ G ++ +D AP++
Sbjct: 2197 SKITPGT-PFWLLGYSFGSLLTLELAARLEREGYHGVVFCLDGAPEFLHAILTMTISFKN 2255
Query: 1258 -------------------------VLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRN 1292
++ L + + ++ + + P +S +
Sbjct: 2256 DFQLQNSLICHTIDIVAPNNTIGKELMEKLNEYESYEERVEVAIKMSPIQTKYSDKFIGA 2315
Query: 1293 LAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQA--LPTAEDYGLSKVCKKPVKVHFV 1350
+A A+Y R+ +L Y I L+RP E + ++Y L K + VHF+
Sbjct: 2316 IAAASYDRLKVVLNYNTKTVNKLKSPIVLMRPKENPPNVTCEDNYSLDKFSDN-LTVHFL 2374
Query: 1351 DGNHFTVLDNIKSAQII 1367
+GNH ++++N A II
Sbjct: 2375 EGNHVSIIENKDCANII 2391
|
Source: Bombyx mori Species: Bombyx mori Genus: Bombyx Family: Bombycidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307213875|gb|EFN89136.1| Fatty acid synthase [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/1115 (47%), Positives = 708/1115 (63%), Gaps = 83/1115 (7%)
Query: 309 VIKVSGVDFHWIPILQKALAAE-ETSTKQKIILLSQLEPLSGIIGFFNCIRKETGGERTR 367
+++V+ DF W+ L + E ET+ ++IL+ + + SG++GF NC+RKE GG+ R
Sbjct: 1309 IVRVNNNDFSWLGKLNSIINVENETTDDMRVILVGEDDLESGLLGFLNCLRKERGGKMIR 1368
Query: 368 CFEILDKNAPPFNPEDPFYKVQVEKDLAVNILRNGQ-WGTYRH-SILQPIKRVMTDHAYI 425
I DK AP F+ ++P Y Q++ +L +N+L+ G+ WG+YRH I +K + HA++
Sbjct: 1369 GVLIQDKQAPEFSLQNPLYAEQLQLELPINVLKPGKIWGSYRHLPISSNLKPKLVHHAFV 1428
Query: 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVI 485
+ +RGD+S+L W +GP+ K D+ + YSSINFRD+ML KL+ +
Sbjct: 1429 HQKIRGDLSTLRWIEGPIRPNVTPK--------DLIYVAYSSINFRDVMLAMGKLSLDSS 1480
Query: 486 ESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCC--ETDVEMAWEIPDQWTLEDA 543
++ C+IG +Y+G + G+RVMG+ R+++N E D + W +PD W+LEDA
Sbjct: 1481 MGHNRFEECLIGVDYAG-VDAVGRRVMGIRDSRTMSNIVSIEPDRSLCWSVPDNWSLEDA 1539
Query: 544 ATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKR 603
AT+PCVYAT YA+++CG M KG+ +LIH+G+GGVGQAAINLA + EIFTTVGTPEKR
Sbjct: 1540 ATIPCVYATCYYALYLCGNMNKGDKVLIHSGTGGVGQAAINLALHEGCEIFTTVGTPEKR 1599
Query: 604 EFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGR 663
EFIRKTFP I +++IGNSRD+SFEQ+V++RTKG GVD+VLNSL++EKLQASVRCLAQ GR
Sbjct: 1600 EFIRKTFPMIPDDHIGNSRDSSFEQMVLQRTKGTGVDIVLNSLSDEKLQASVRCLAQNGR 1659
Query: 664 FLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP 723
FLEIGKFDL NN LGM VF++E SFHG+ L+N F A E K+ L L + ++ GAV+P
Sbjct: 1660 FLEIGKFDLIANNALGMMVFLKEVSFHGIRLENMFEASVEEKIRLNNLLTEGLENGAVKP 1719
Query: 724 LVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQLLAVPRYYADSNKS 783
L R +F + +VE AFRYM+ GKHIGK+I+K+ DEE KV +LA P+YY DS KS
Sbjct: 1720 LFRKVFEQKEVETAFRYMSTGKHIGKIILKVCDEEKAG----KVP-VLAEPQYYCDSEKS 1774
Query: 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTD-D 842
YII GGLGGFGLELADWLVLRGA+ L+LTSR+GV+ GYQ +RI +WKSY V VLI T D
Sbjct: 1775 YIILGGLGGFGLELADWLVLRGAKNLILTSRTGVRTGYQRMRIDLWKSYGVNVLIITGAD 1834
Query: 843 ITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKY 902
+L A K GPVD IFNLAVVLKDAL+ENQT E F S PKA +TK D+
Sbjct: 1835 AANRKDCEFILKSAAKQGPVDAIFNLAVVLKDALYENQTVESFEESFKPKAWSTKTLDEL 1894
Query: 903 SRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGAVGE 962
SR +CP L FVVFSSVSCGRGN GQTNYGMANS+MERICE R A+GLPGLA++WGAVG+
Sbjct: 1895 SRKLCPRLQHFVVFSSVSCGRGNVGQTNYGMANSVMERICEKRVADGLPGLAIQWGAVGD 1954
Query: 963 VGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKKAGSGGATNI 1022
VGL A+ E N E++I GTLQQ IS CLE L FL+Q P+VASMVVAEK+ G GA N+
Sbjct: 1955 VGLFAERQESNKELIISGTLQQNISLCLEKLELFLLQGRPVVASMVVAEKRRGVYGAANV 2014
Query: 1023 VDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIRGLTFAKL 1082
V+ V+NI+GL D TV+ H +L ELGMDSMMAVEIKQTLEREF +F T QDIR LTF+KL
Sbjct: 2015 VETVLNIMGLNDPNTVAQHMSLVELGMDSMMAVEIKQTLEREFNIFFTTQDIRTLTFSKL 2074
Query: 1083 QDIAVSFENDDKSKPVSTEASGGQVTALSVEDIPDVGIQYLMRTIGDEILANKPVIRLPS 1142
++ S E ++K K S E + ++P G+Q L++ IGD+ + + + LP+
Sbjct: 2075 TEMDKSTE-EEKLKEKSNEKT---------TELP--GMQLLIQVIGDKDIISDVCLELPT 2122
Query: 1143 LKNNGSTVEEPVGNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTN---PPDTIP 1199
K+ +F++ GIEG V PL I Q+ N +IP
Sbjct: 2123 KKDRRKV---------DVFLLAGIEGCGHVFNPLVSKIRPTAKCLQYGTYNIGLSHTSIP 2173
Query: 1200 EMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKCHLYLVDSAPDY-- 1257
+ AD LLP+ + LVG+S+G +VA+ELA +LE G L L+D APD
Sbjct: 2174 DYADHLLPYVLPK-AEQQRFFVLVGYSYGSLVAIELARRLESHGLNGRLVLIDGAPDLMR 2232
Query: 1258 ----------------------------------VLTSLRKLPDWNAKLNYFLDLMPE-D 1282
+L +L K W KL F D
Sbjct: 2233 TMIENFIPFSTAEEFQNNVLLSIMDILQPTTSGKLLLNLNKCMSWEQKLENFTSYFSNTD 2292
Query: 1283 ATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQALPTA-EDYGLSKVC 1341
+ S + L YKR+ ++ KY I LL+PT Q++ + EDYGL K+
Sbjct: 2293 ISVSMKNLKALCTTIYKRLLALQKYDVSSMPPLRTPIILLKPTLQSIQMSEEDYGLRKIT 2352
Query: 1342 KKPVKVHFVDGNHFTVLDNIKSAQIIMHEDSTDFK 1376
+ V++H+++GNH T+LD+ K I E D K
Sbjct: 2353 RDKVEIHYIEGNHVTMLDSDKVVAAINGEPMQDPK 2387
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157118100|ref|XP_001659008.1| fatty acid synthase [Aedes aegypti] gi|108875860|gb|EAT40085.1| AAEL008160-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/1128 (45%), Positives = 705/1128 (62%), Gaps = 85/1128 (7%)
Query: 287 EKYKFIQNEGLKVKSPVKISPLVIKVSGVD-FHWIPILQKALAAEETSTKQKIILLSQLE 345
E Y +Q ++K SP ++ + D + W+ L+ A+ + +I ++Q +
Sbjct: 1280 ETYVLLQ----RIKRKYMGSPTIVPIPNDDKYDWVAKLRDAM------KQGSVIAVAQGD 1329
Query: 346 PLSGIIGFFNCIRKETGGERTRCFEILDKNAPPFNPEDPFYKVQVEKDLAVNILRNGQWG 405
+SGI+G NCIRKE G C + D AP F ++P YK ++ LA+N+ RNG+WG
Sbjct: 1330 SMSGILGLVNCIRKEPDGGMVSCVFVDDPKAPAFELDNPVYKSHLKLGLALNVYRNGRWG 1389
Query: 406 TYRH-SILQPI-KRVMTDHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQI 463
+YRH +LQPI + DH Y NAL +GD+SS+TW GP Y++ ++ ++
Sbjct: 1390 SYRHLQLLQPIVTKPRRDHCYANALTKGDLSSMTWLGGP--------YNQRRPTRELVKV 1441
Query: 464 YYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANC 523
YSS+NFRD+M + KL + RL Q C +GFEYSG + +SGKR+MG+ + ++A
Sbjct: 1442 CYSSLNFRDVMFASGKLTADFANLSRLEQQCDLGFEYSG-VTESGKRLMGMLTTGAMATH 1500
Query: 524 CETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAI 583
E D + W +P+ WTLE+AATVP VY T A+F+ +QKG+SILIHAGSGGVG AAI
Sbjct: 1501 VENDESLTWIVPEHWTLEEAATVPVVYGTVYTALFLNANIQKGQSILIHAGSGGVGLAAI 1560
Query: 584 NLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVL 643
N+ + E++TTVGT KR+F+ +TFP +K ENIGNSRDTSFE+++M RT G GVD VL
Sbjct: 1561 NVCQAYGLEVYTTVGTQAKRDFLLQTFPKLKPENIGNSRDTSFEKMIMLRTNGMGVDYVL 1620
Query: 644 NSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQE 703
NSL+E+KLQAS+RCL + G+FLEIGK+D+AN++ LG+ F+R SF +++D F A E
Sbjct: 1621 NSLSEDKLQASLRCLGKYGKFLEIGKYDMANDSKLGLHRFLRALSFTAILVDFLFTAPLE 1680
Query: 704 WKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKIC 763
K L+ + K I AG V+PL +FP ++E AFRY+A+GKH+GKV++KIR E P +
Sbjct: 1681 EKQVLRDLVDKDIKAGIVKPLKTNVFPASEIENAFRYLASGKHVGKVLLKIR-ENPNDVE 1739
Query: 764 TPKVKQLLAVPRYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQA 823
+ + L PR Y + + SYII GGLGGFGLELADWLVLRG RKLVL+S G+ YQA
Sbjct: 1740 SVPIAYL---PRMYCNPDHSYIIAGGLGGFGLELADWLVLRGCRKLVLSSSRGITKPYQA 1796
Query: 824 LRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPE 883
RIK+W+ Y VQV+++T+DITT+ G L+ A KLGPV GI+NLAV L+D +FENQ+ +
Sbjct: 1797 YRIKMWEQYGVQVVVNTEDITTKKGCEALIMAAMKLGPVGGIYNLAVQLRDGIFENQSVQ 1856
Query: 884 DFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICE 943
F +GPKA ATK+ D+ SR +CP L FVVFSSVSCGRGNAGQ+NYGMANS+MERI E
Sbjct: 1857 KFIECMGPKAVATKHLDELSRKLCPNLSYFVVFSSVSCGRGNAGQSNYGMANSVMERIIE 1916
Query: 944 ARRAEGLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPI 1003
R A GLP AV+WGAVGEVGLVADM ED L++ IGGTLQQRIS+CL+ L+ L EPI
Sbjct: 1917 HRHANGLPAKAVQWGAVGEVGLVADMQEDKLDMEIGGTLQQRISSCLQELDPLLTTPEPI 1976
Query: 1004 VASMVVAEKKAGSGGATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLER 1063
VASMVVAEK+ S G NI+++V+NI+ +RD+K+VS+ +TL+ELGMDS+MAVEIKQTLER
Sbjct: 1977 VASMVVAEKRVRSSGKDNIIESVMNIMSIRDIKSVSMDTTLSELGMDSLMAVEIKQTLER 2036
Query: 1064 EFEVFLTPQDIRGLTFAKLQDIA-VSFENDDKSKPVSTEASGGQVTALSVEDIPDVGIQY 1122
E+E+FLTPQD+R LTF KLQ++ +DD K L+ E P G+
Sbjct: 2037 EYELFLTPQDLRSLTFLKLQELTEAKACSDDNVK-----------LKLANEKTP-TGVAM 2084
Query: 1123 LMRTIGDEILANKPVIRLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIA-TVLEPLAKNIN 1181
L+R +GDE + ++RL S ++ N + + PGIEG+A +A +
Sbjct: 2085 LLRNLGDEFNSEHTILRLQSENDSKKY-------NACVLLTPGIEGVAGNAWHSIASQLT 2137
Query: 1182 AQVLVFQFDHTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQ 1241
+ Q T +IPE+ L + + GT+ LVG+SFG + LELA LE+
Sbjct: 2138 LPTFITQLTKTINMSSIPEICQFLSQDVIENVFKGTEHFYLVGYSFGAFITLELARLLEE 2197
Query: 1242 LGTKCHLYLVDSAPDY-------------------------------------VLTSLRK 1264
G + + L+D AP + VL +
Sbjct: 2198 TGKRGKILLIDGAPKFLHKLALDQMSDNWTEETVQIVLFAGILNTIYPDETTDVLPIISG 2257
Query: 1265 LPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRP 1324
P + A+++ L+L + +S +Y R + A + RI L Y K ITL+RP
Sbjct: 2258 CPSFEARMDKLLELTKDQNIYSESYLRMMTKALFNRIKITLLYDVNKITPLESPITLVRP 2317
Query: 1325 TE-QALPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHED 1371
TE + EDYGL++ K V + F++GNH T+L+N K QII D
Sbjct: 2318 TEVSVVDIEEDYGLAEYTKGTVSLKFLEGNHITMLENPKLTQIITESD 2365
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|390179170|ref|XP_002137899.2| GA26263 [Drosophila pseudoobscura pseudoobscura] gi|388859741|gb|EDY68457.2| GA26263 [Drosophila pseudoobscura pseudoobscura] | Back alignment and taxonomy information |
|---|
Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/1117 (45%), Positives = 698/1117 (62%), Gaps = 78/1117 (6%)
Query: 298 KVKSPVKISPLVIKVSGVD--FHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFN 355
K ++I PLV+KVS D F WI +Q AL S+K ++L S E LSG+IG N
Sbjct: 1268 KAPKNLQIEPLVVKVSENDKMFEWIAPIQSAL-----SSKTPVVLYSFNEELSGLIGLVN 1322
Query: 356 CIRKETGGERTRCFEILDKNAPPFNPEDPFYKVQVEKDLAVNILRNGQWGTYRHSILQPI 415
C+RKE G +CF I DK AP FN DPFY Q LA+NI RNG WG+ RH L
Sbjct: 1323 CLRKEPDGNLVKCFFIADKTAPAFNLADPFYSAQHSLGLAINIYRNGTWGSLRHLKLPKS 1382
Query: 416 KRVMT--DHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDI 473
+ MT DH Y N + RGD+S+L W +GP+N + + +I YSS+NFRD+
Sbjct: 1383 DKPMTRLDHIYGNVIQRGDLSTLRWLEGPLNPQDC-----------MIKIAYSSLNFRDV 1431
Query: 474 MLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWE 533
ML T +LA E+ S R+ Q+CV+GFEYSG +G+R+M + +A+ E ++ W+
Sbjct: 1432 MLATGRLAVELYGSSRIDQNCVLGFEYSGINTVTGRRIMSMVVKGGVASYVEKPSKLIWD 1491
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
IPD W+L++AATVP VY T YA F+ ++KG+SILIHAG+GG+G AAI +A + E+
Sbjct: 1492 IPDHWSLKEAATVPVVYITVYYAFFMVSDIRKGKSILIHAGTGGIGLAAIRVALAYNLEV 1551
Query: 594 FTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQA 653
FTT TP+K++F+ TFP +KE NIGNSRDTSFE ++ + T G GVD VLNSL+E+KL A
Sbjct: 1552 FTTCSTPQKKQFLLDTFPQLKESNIGNSRDTSFELMIQRETDGNGVDFVLNSLSEDKLLA 1611
Query: 654 SVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQ 713
SVRCL + G FLEIGKFD+AN++ LGM F++E +FH V+ D+ A +E L+ +
Sbjct: 1612 SVRCLGKSGHFLEIGKFDMANDSKLGMGCFLKEITFHAVLADSLLVAPEEDIWHLKSLID 1671
Query: 714 KAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQLLAV 773
I G +QPL +FP ++E+AFR++ GKHIGKV+I++RD P T V+ +
Sbjct: 1672 ADISKGIIQPLPVQVFPAHEIEQAFRHLIGGKHIGKVVIQVRDT-PDNPATLPVR---VM 1727
Query: 774 PRYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYD 833
+ Y N SY+I GGLGGFG+ELADW+ LRGARKL+L+S G+ YQ+ RI +WK+Y
Sbjct: 1728 SQIYFKPNLSYVIPGGLGGFGMELADWMALRGARKLILSSSRGITKDYQSYRIALWKTYG 1787
Query: 834 VQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKA 893
+V+I+T DI+T G LL+EA+KLGPV GIFNLAV+L+DA+F NQ+ + F S PKA
Sbjct: 1788 CEVVINTADISTIEGCQKLLSEASKLGPVGGIFNLAVMLRDAIFSNQSLDQFVESFAPKA 1847
Query: 894 NATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGL 953
ATK+ D SR CP L FVVFSSVSCGRGNAGQTNYGMANSIMERI E R +GLPG
Sbjct: 1848 VATKHLDTLSRVFCPELEHFVVFSSVSCGRGNAGQTNYGMANSIMERIIECRHRDGLPGK 1907
Query: 954 AVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKK 1013
A++WGAVGEVGLVADMAED +++ IGGTLQQRI++CL+ L+ L PIVASMVVAEK+
Sbjct: 1908 AIQWGAVGEVGLVADMAEDKIDMEIGGTLQQRIASCLQELDYLLSAESPIVASMVVAEKR 1967
Query: 1014 AGSGGATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQD 1073
+G G +I+DAV+NI+G+RDLK+VSL +TL+E+GMDS+MAVEIKQTLER+FE+ L+PQD
Sbjct: 1968 SGRSGNESIIDAVMNIMGIRDLKSVSLGTTLSEMGMDSLMAVEIKQTLERDFELVLSPQD 2027
Query: 1074 IRGLTFAKLQDIAVSFENDDKSKPVSTEASGGQVTALSVEDIPDVGIQYLMRTIGDEILA 1133
+R LTF KLQ+ + E ++ + + D +G+ L+R +GDE
Sbjct: 2028 LRSLTFQKLQEFVEAKEGENTD----------DIKMIFASDSNLLGMDLLLRNLGDEAHC 2077
Query: 1134 NKPVIRLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIA-TVLEPLAKNINAQVLVFQFDHT 1192
++ +I L N + + N I +PG+EG A + N+ ++ +V Q
Sbjct: 2078 DQVMIPL----NTSAAPSKQSFPPNII--IPGLEGTAGQAWYHIGSNLQSRAVVLQLHQF 2131
Query: 1193 NPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKCHLYLVD 1252
+T+ E+A+ L K ++ T+ ++G+S+G VAL+LA LE G + H+ L+D
Sbjct: 2132 ASLETVQEIAEQSLERVKP-ILKPTEPFYIIGYSYGTFVALKLAQLLENAGFRGHIMLLD 2190
Query: 1253 SAPDYV--LTSL---------------------------------RKLPDWNAKLNYFLD 1277
AP ++ LT+L K+ K+ F++
Sbjct: 2191 GAPHFLKRLTNLHLGENFSDNDLYDLLLTRIVSKIFHQESTAPAFHKINSLEEKMTLFME 2250
Query: 1278 LMPEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQALPTA-EDYG 1336
+ + +S+ Y + A ++R+ K+ K ITL+RP E +L EDY
Sbjct: 2251 YVEKQKVYSKEYATTMVGAMFRRVKMAAKFDLDSTKNLKSPITLVRPAEVSLQDIDEDYC 2310
Query: 1337 LSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDST 1373
+S++ V + ++GNH T+LDN A+II D T
Sbjct: 2311 VSQLTAGKVVLKVIEGNHTTMLDNPALAKIINDFDPT 2347
|
Source: Drosophila pseudoobscura pseudoobscura Species: Drosophila pseudoobscura Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|170044457|ref|XP_001849863.1| fatty acid synthase S-acetyl transferase [Culex quinquefasciatus] gi|167867603|gb|EDS30986.1| fatty acid synthase S-acetyl transferase [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/1128 (45%), Positives = 706/1128 (62%), Gaps = 84/1128 (7%)
Query: 287 EKYKFIQNEGLKVKSPVKISPLVIKVSGVD--FHWIPILQKALAAEETSTKQKIILLSQL 344
E Y +Q ++K SP ++++ D + WIP L+ AL + +I+++Q
Sbjct: 1280 ETYVLLQ----RIKRKYLGSPTILQIPANDEQYQWIPKLRDAL------KQGSVIVVAQG 1329
Query: 345 EPLSGIIGFFNCIRKETGGERTRCFEILDKNAPPFNPEDPFYKVQVEKDLAVNILRNGQW 404
+ SGI+G NCIRKE G C I D APPF ++P YK ++ LA+N+ R+G+W
Sbjct: 1330 DSSSGIVGLVNCIRKEPDGGMVSCVFIDDPKAPPFELDNPIYKAHLKLGLAINVYRSGRW 1389
Query: 405 GTYRH-SILQP-IKRVMTDHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQ 462
GTYRH +LQP I + DH Y NAL +GD+SS+TW GP N K ++ +
Sbjct: 1390 GTYRHLQLLQPTITKPRRDHCYANALTKGDLSSMTWLSGPFNQCRPKG--------EMVR 1441
Query: 463 IYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLAN 522
+ YSS+NFRD+M + KL+ + R+ Q C +GFEYSG + +SG+RVMG+ + ++A
Sbjct: 1442 VCYSSLNFRDVMFASGKLSADFANLTRIEQQCELGFEYSG-VAESGRRVMGMVTTGAMAT 1500
Query: 523 CCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAA 582
E D + W +PD+W+LE+AATVP VY T A+FI + KG+SILIHAGSGGVG AA
Sbjct: 1501 HVECDDTLNWTVPDKWSLEEAATVPVVYTTVYCALFINAHIHKGQSILIHAGSGGVGLAA 1560
Query: 583 INLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLV 642
I + E+FTTVG+ KR+F+ +TF +K +NIGNSRDTSFE+++M RT+G+GVD V
Sbjct: 1561 IRVCLAYGLEVFTTVGSQAKRDFLLQTFSQLKADNIGNSRDTSFEKMIMLRTEGKGVDYV 1620
Query: 643 LNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQ 702
LNSL+++KLQAS+RCL + G+FLEIGK+D+AN+ LG+ F+R SF V++D F A
Sbjct: 1621 LNSLSDDKLQASLRCLGKYGKFLEIGKYDMANDTKLGLHRFLRALSFTAVLVDFLFTAPP 1680
Query: 703 EWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKI 762
E K L+ L K I AG + PL +FP ++E AFRY+A+GKH+GKV++KIR+
Sbjct: 1681 EEKAVLKAMLDKDIKAGIIVPLKSNVFPASEIEHAFRYLASGKHVGKVLLKIRENPKDDE 1740
Query: 763 CTPKVKQLLAVPRYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQ 822
P L +PR Y + + SY++CGGLGGFGLELADWLVLRGARK+V++S G+ YQ
Sbjct: 1741 SLP----LAYLPRMYCNPDLSYVVCGGLGGFGLELADWLVLRGARKIVMSSSRGISKPYQ 1796
Query: 823 ALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTP 882
A RIKIW+ Y V+V+++T++I+T G LL A KLGPV GI+NLAV L+D++FENQT
Sbjct: 1797 AYRIKIWEQYGVKVVVNTENISTRKGCEALLQAACKLGPVGGIYNLAVQLRDSIFENQTV 1856
Query: 883 EDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERIC 942
E F +GPKA ATKY D+ SR MCP LG FVVFSSVSCGRGNAGQ+NYGMANS+MERI
Sbjct: 1857 ERFVECMGPKALATKYLDELSRKMCPQLGYFVVFSSVSCGRGNAGQSNYGMANSVMERII 1916
Query: 943 EARRAEGLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEP 1002
E R A GLP AV+WGAVGEVGLVADM ED L++ IGGTLQQRIS+CL+ L+ L +P
Sbjct: 1917 EHRHACGLPAKAVQWGAVGEVGLVADMQEDKLDMEIGGTLQQRISSCLQELDPLLTTPDP 1976
Query: 1003 IVASMVVAEKKAGSGGATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLE 1062
IVASMVVAEK+A + G NI+++V+NI+ +RD+K++S+ +TL+ELGMDS+MAVEIKQTLE
Sbjct: 1977 IVASMVVAEKRARTTGKDNIIESVMNIMSIRDIKSISMDTTLSELGMDSLMAVEIKQTLE 2036
Query: 1063 REFEVFLTPQDIRGLTFAKLQDIAVSFENDDKSKPVSTEASGGQVTALSVEDIPDVGIQY 1122
RE+E+FLTPQD+R LTF KLQ++ + N D++ + L+ E P G+
Sbjct: 2037 REYELFLTPQDLRSLTFMKLQELTEAKANADENVKLK----------LANEKTP-TGVAM 2085
Query: 1123 LMRTIGDEILANKPVIRLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIA-TVLEPLAKNIN 1181
L+R +GDE + ++RL S ++ N + + PGIEG+A +A +
Sbjct: 2086 LLRNLGDEFNSEHTILRLQSENDSKKY-------NACVLLSPGIEGVAGNAWHNIASQLT 2138
Query: 1182 AQVLVFQFDHTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQ 1241
+ Q T ++I E+ L + + GT+ LVG+SFG + LE+A LE+
Sbjct: 2139 LPTFITQLTKTINMESIEEIGQFLSNDVIENIFKGTEHFYLVGYSFGAFITLEMARLLEE 2198
Query: 1242 LGTKCHLYLVDSAPDY-------------------------------------VLTSLRK 1264
G + L+D AP + VL + +
Sbjct: 2199 TGKHGQILLIDGAPKFLHKLAIDQMSANWTEESIQIVLIAGILNTIFPDETTDVLPIITE 2258
Query: 1265 LPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRP 1324
P + ++++ L+L + +S Y R + A Y RI L K ITL+RP
Sbjct: 2259 CPTFESRIDKLLELAKDQNIYSEGYLRMMTKALYNRIKITLLTDVNCIKPLESPITLVRP 2318
Query: 1325 TE-QALPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHED 1371
TE + EDYGLS+ V + F++GNH T+L+N K QII D
Sbjct: 2319 TEVSVVDIEEDYGLSEYTTGTVSLKFLEGNHITMLENPKLTQIITESD 2366
|
Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1392 | ||||||
| FB|FBgn0027571 | 2544 | CG3523 [Drosophila melanogaste | 0.672 | 0.367 | 0.473 | 1.4e-289 | |
| FB|FBgn0040001 | 2394 | CG17374 [Drosophila melanogast | 0.666 | 0.387 | 0.473 | 1.7e-282 | |
| ZFIN|ZDB-GENE-030131-7802 | 2514 | fasn "fatty acid synthase" [Da | 0.568 | 0.314 | 0.495 | 2.1e-268 | |
| FB|FBgn0042627 | 2409 | v(2)k05816 "v(2)k05816" [Droso | 0.743 | 0.429 | 0.441 | 2e-263 | |
| MGI|MGI:95485 | 2504 | Fasn "fatty acid synthase" [Mu | 0.561 | 0.312 | 0.493 | 4.1e-261 | |
| RGD|620665 | 2505 | Fasn "fatty acid synthase" [Ra | 0.556 | 0.309 | 0.491 | 6.7e-257 | |
| UNIPROTKB|P12785 | 2505 | Fasn "Fatty acid synthase" [Ra | 0.556 | 0.309 | 0.491 | 6.7e-257 | |
| UNIPROTKB|F1N8A8 | 2512 | FASN "Fatty acid synthase" [Ga | 0.576 | 0.319 | 0.486 | 2e-255 | |
| UNIPROTKB|E1BW07 | 2513 | FASN "Fatty acid synthase" [Ga | 0.576 | 0.319 | 0.485 | 1.8e-254 | |
| UNIPROTKB|P12276 | 2512 | FASN "Fatty acid synthase" [Ga | 0.576 | 0.319 | 0.483 | 1.3e-253 |
| FB|FBgn0027571 CG3523 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 2196 (778.1 bits), Expect = 1.4e-289, Sum P(3) = 1.4e-289
Identities = 452/955 (47%), Positives = 612/955 (64%)
Query: 308 LVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCIRKETGGERTR 367
+V+ + +F+W+ L+ ALA T +Q + ++ Q E L G +G CI+ E GG+ R
Sbjct: 1448 VVVVATEQNFNWVDDLKAALATAATE-EQYVYVVCQGEELFGAVGLMTCIKNENGGKLAR 1506
Query: 368 CFEILDKNAPPFNPEDPFYKVQVEKDLAVNILRNGQWGTYRHSILQPIKRVM-TDHAYIN 426
+ D A F+ Y+ Q+EKDL N+L+NG WGT+RH L+ + + +HAY+N
Sbjct: 1507 LVFVQDAKAEKFSLTSTLYRQQLEKDLISNVLKNGAWGTFRHLKLETQQATLQVEHAYVN 1566
Query: 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIE 486
ALV+GD++SL W + T K N + +YY+ INFRD+MLT+ KLA + +
Sbjct: 1567 ALVKGDLASLKWIEA-AQADTAATVDK---NLETCTVYYAPINFRDVMLTSGKLAADALP 1622
Query: 487 SRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATV 546
Q CV+G E++GR G+RVM + +SLA C M W+IP++WT+E+A+TV
Sbjct: 1623 GDLAEQDCVLGLEFAGR-DTQGRRVMAMVPAKSLATTCVASKRMMWQIPEKWTMEEASTV 1681
Query: 547 PCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFI 606
PCVY+T YA+ + GQM+KGE ILIHAGSGGVGQAAI++A +FTTVG+ EKREF+
Sbjct: 1682 PCVYSTVYYALVVRGQMKKGEKILIHAGSGGVGQAAISVALAHGLTVFTTVGSKEKREFL 1741
Query: 607 RKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLE 666
K FP ++E NIGNSRDTSFEQLV++ TKGRGVDLVLNSL+EEKLQAS+RCL GRFLE
Sbjct: 1742 LKRFPKLQERNIGNSRDTSFEQLVLRETKGRGVDLVLNSLSEEKLQASIRCLGLNGRFLE 1801
Query: 667 IGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVR 726
IGKFDL+NN+ LGM VF++ TSFHG++LD+ E+E + + + + I GAV PL
Sbjct: 1802 IGKFDLSNNSPLGMSVFLKNTSFHGILLDSVMEGEEEMQNQVVSLVAEGIKTGAVVPLPT 1861
Query: 727 TIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEP-TKICTPKVKQLLAVPRYYADSNKSYI 785
++F + +VE+AFR+MA+GKHIGKV+IK+RDEE K PK + + A+PR Y KSYI
Sbjct: 1862 SVFNDQQVEQAFRFMASGKHIGKVVIKVRDEEAGKKALQPKPRLINAIPRTYMHPEKSYI 1921
Query: 786 ICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITT 845
+ GGLGGFGLEL +WLV RGAR +VLTSRSGVK GYQ L I+ W+ V+V+I T D+TT
Sbjct: 1922 LVGGLGGFGLELTNWLVTRGARYIVLTSRSGVKTGYQGLMIRRWQERGVKVVIDTSDVTT 1981
Query: 846 EAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRT 905
AG LL +NKL V GIFNLA VL+DAL E+QT +DF PK ATKY D++SR
Sbjct: 1982 AAGAKKLLENSNKLALVGGIFNLAAVLRDALIEDQTAKDFKTVADPKVTATKYLDQFSRD 2041
Query: 906 MCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGAVGEVGL 965
+C L F+ FSSVSCGRGN GQTNYG+ANS MERICE R+ G PG A++WGA+G+ GL
Sbjct: 2042 ICTELDYFICFSSVSCGRGNIGQTNYGLANSAMERICEQRQVSGFPGTAIQWGAIGDTGL 2101
Query: 966 VADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEK-KAGSGGATNIVD 1024
V + DN + VIGGTL QR+ +CL+ ++ FL Q P+VASMVVAEK K+ +++
Sbjct: 2102 VLENLGDN-DTVIGGTLPQRMPSCLQTIDLFLQQPHPVVASMVVAEKRKSDQSAGVSLIA 2160
Query: 1025 AVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIRGLTFAKLQD 1084
+ NILGLRD K + ++LA+LGMDS+M+ EIKQTLER F++ L+ Q+IR LTF L+
Sbjct: 2161 TIANILGLRDTKNIQDGASLADLGMDSLMSAEIKQTLERNFDIVLSAQEIRQLTFGALK- 2219
Query: 1085 IAVSFENDDKSKPVSTEASGGQVTALSVEDIPDVGIQYLMRTIGDEILANKPVIRLPSLK 1144
A+ D K + A+ G A +I G +GD +P+
Sbjct: 2220 -AMDGGADVKPAAAAPAAAAGVPEA----NITSGGSSRTASPMGDGTQVVFTTSLIPTEA 2274
Query: 1145 NNGSTVEEPVGNNNT-IFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTNPPDTIPEMAD 1203
+ P + + IF + IEG A+ LEPLAK + Q+ P D++ A
Sbjct: 2275 IVQLDTKAPANSKQSPIFFISPIEGFASALEPLAKRLEVPAYGLQYTEAVPSDSLESAAK 2334
Query: 1204 SLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKCHLYLVDSAPDYV 1258
+ R V KL G+SFG ++ +A LE+ ++ ++D AP YV
Sbjct: 2335 FFIKQL--RTVQPKGPYKLAGYSFGCLLTYVMAGILEETNEVANVIMLDGAPSYV 2387
|
|
| FB|FBgn0040001 CG17374 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 2132 (755.6 bits), Expect = 1.7e-282, Sum P(3) = 1.7e-282
Identities = 460/972 (47%), Positives = 627/972 (64%)
Query: 298 KVKSPVKISPLVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCI 357
K+ + + P+++KVS D + IL+ A TK +++ S E L+G IG NC+
Sbjct: 1292 KISKKLTVPPVLVKVSQHDKTFEWILELQSAI---ITKAPVVVYSFNEKLNGQIGLVNCL 1348
Query: 358 RKETGGERTRCFEILDKNAPPFNPEDPFYKVQVEKDLAVNILRNGQWGTYRHSILQPIKR 417
RKE G RCF I D +AP F+ PFY Q LA NI RNG WG+YRH LQ +K
Sbjct: 1349 RKEPDGNLIRCFFIDDDSAPDFDLSHPFYSTQYSLGLAFNIYRNGSWGSYRH--LQLLKN 1406
Query: 418 VMT----DHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDI 473
DH Y N + RGD+SSL W +GP N + N + IA +SS+NFRD+
Sbjct: 1407 DQPSKRLDHIYGNVIQRGDLSSLQWLKGPFNSQ--------NCHIKIA---FSSLNFRDV 1455
Query: 474 MLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWE 533
ML T +LA E+ S R+ Q+CV+GFEYSG +G+R+M + +A+ E ++ W+
Sbjct: 1456 MLATGRLAVELYGSSRIDQNCVLGFEYSGINMLTGRRIMSMVVKGGVASYVEKPSKLIWD 1515
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
IPD W+LE+AATVP VY T YA F+ ++KG+SILIHAG+GG+G AAI +A + E+
Sbjct: 1516 IPDDWSLEEAATVPVVYITVYYAFFMATDIRKGKSILIHAGTGGIGLAAIRVALAYNLEV 1575
Query: 594 FTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQA 653
FTT T K+EF+ KTFP +KE +IGNSR+TSFE +V + T G+GVD VLNSL+EEKL A
Sbjct: 1576 FTTCSTANKKEFLLKTFPKLKESHIGNSRNTSFELMVHRETNGKGVDFVLNSLSEEKLLA 1635
Query: 654 SVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQ 713
S+RCL + G FLEIGK+D+AN+N +G+ F++E +FH V+ D+ A E L+ +
Sbjct: 1636 SLRCLGKSGHFLEIGKYDMANDNKIGLGCFLKEITFHAVLADSLLVAPDEDIWHLKSLID 1695
Query: 714 KAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQLLAV 773
I G +QPL +F ++E+AFR++ GKHIGKV+I++R E+P T V+ L V
Sbjct: 1696 MDISNGIIQPLPVKVFLAHEIEQAFRHLIGGKHIGKVVIQVR-EQPHDPSTLPVRVLNQV 1754
Query: 774 PRYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYD 833
Y N +Y+I GGLGGFG+ELADW+ +RGARKL+L+S G+ YQ RI +WK+Y
Sbjct: 1755 ---YFKHNHTYVIPGGLGGFGMELADWMAIRGARKLLLSSSRGITKDYQLYRIALWKTYG 1811
Query: 834 VQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKA 893
+V IST DIT++ G LL+EAN +GPV GIFNLAVVLKD +F NQ F PKA
Sbjct: 1812 CEVAISTADITSKKGCAQLLSEANGMGPVGGIFNLAVVLKDCIFSNQNVNQFLECFAPKA 1871
Query: 894 NATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGL 953
AT Y D SR CP L FVVFSSVSCGRGNAGQ+NYGMANS+MERI E R EG PG
Sbjct: 1872 IATTYLDDLSRIYCPELEHFVVFSSVSCGRGNAGQSNYGMANSVMERIIEHRNREGFPGK 1931
Query: 954 AVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKK 1013
A++WGA+GEVGLVADMAED +++ IGGTLQQRIS+C++ L+ L IV+SMVVAEK+
Sbjct: 1932 AIQWGAIGEVGLVADMAEDKIDMEIGGTLQQRISSCIQELDHLLCADASIVSSMVVAEKR 1991
Query: 1014 AGSGGATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQD 1073
G N++DAV+NI+G+RDLK+VSL +TL+E+GMDS+MAVEIKQTLER+FE+ LTPQD
Sbjct: 1992 TMRSGQGNVIDAVMNIMGIRDLKSVSLSTTLSEMGMDSLMAVEIKQTLERDFELILTPQD 2051
Query: 1074 IRGLTFAKLQDIAVSFENDDKSKPVSTEASGGQVTALSVEDIPDVGIQYLMRTIGDEILA 1133
+R LTF KLQ+ D K K +T+ G Q+ S + +G++ L+R +GDE A
Sbjct: 2052 LRHLTFQKLQEFI-----DAKEKE-NTD--GIQIIFASDNKL--LGMELLIRNLGDE--A 2099
Query: 1134 NKPVIRLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIA-TVLEPLAKNINAQVLVFQFDHT 1192
N I +P L+ + + ++ + N ++PG+EG A L + + +V Q
Sbjct: 2100 NCDQIIIP-LQTSAAPSKQNLQPN---IIIPGLEGTAGRAWYQLGSKLQSPAIVLQLHQF 2155
Query: 1193 NPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKCHLYLVD 1252
+ + ++A K ++ T+ ++ +S+G VAL LA LE G + HL L+D
Sbjct: 2156 AHLENLKDVAQQSFDQIKL-ILKQTEPFYIIAYSYGTFVALLLAEMLENSGFRGHLMLLD 2214
Query: 1253 SAPDYV--LTSL 1262
AP ++ LT+L
Sbjct: 2215 GAPHFLKRLTNL 2226
|
|
| ZFIN|ZDB-GENE-030131-7802 fasn "fatty acid synthase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 2005 (710.9 bits), Expect = 2.1e-268, Sum P(6) = 2.1e-268
Identities = 407/821 (49%), Positives = 564/821 (68%)
Query: 307 PLVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCIRKETGGERT 366
P+ I V D+ W+ L+ LA E+S + L + +G++G NC+R+E GG R
Sbjct: 1423 PIHIFVDPTDYKWVETLKSTLA--ESSDIP--VWLIATKGHNGVVGMVNCLRQEPGGNRI 1478
Query: 367 RCFEI--LDKNA--PPFNPEDPFYKVQVEKDLAVNILRNGQWGTYRHSIL-QPIKRVMTD 421
RC + L K A P P + K ++KDL +N+ R+G WG +RH +L Q + +T+
Sbjct: 1479 RCTFVSNLSKGAAVPSLLPNEKVMKALLKKDLVMNVHRDGLWGVFRHQLLTQDLSEELTE 1538
Query: 422 HAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLA 481
AY+N L RGD+SSL W P+ + + + N + ++YYSS+NFRDIML T KL
Sbjct: 1539 QAYVNVLTRGDLSSLRWIASPL-----RHFVASSPNVQLCRVYYSSLNFRDIMLATGKLP 1593
Query: 482 PEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLE 541
P+ I Q C++G E+SGR SG+RVMGL + LA C + D W++P WTLE
Sbjct: 1594 PDAIPGDVALQQCMLGMEFSGR-DPSGRRVMGLLPAKGLATCVDADKRFLWDVPSSWTLE 1652
Query: 542 DAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPE 601
AA+VP VYATA Y++ + G+++ GES+LIH+GSGGVGQAAI +A M +FTTVG+ E
Sbjct: 1653 QAASVPVVYATAYYSLVVRGRLRPGESVLIHSGSGGVGQAAIAIALSMRCRVFTTVGSKE 1712
Query: 602 KREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQG 661
K++++++ FP + E+ NSRD+SFEQ VM T+G+GVDLVLNSLAEEKLQAS+RCLA+
Sbjct: 1713 KKQYLQERFPQLTAESFANSRDSSFEQHVMLNTQGKGVDLVLNSLAEEKLQASLRCLARH 1772
Query: 662 GRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFF-AEQEWKMSLQKALQKAIDAGA 720
GRFLEIGK+DL+NN LGM +F++ +FHG++LD F +EW+ + L+K I +G
Sbjct: 1773 GRFLEIGKYDLSNNTPLGMALFLKNVAFHGILLDALFEEGNREWE-EVSDLLKKGISSGV 1831
Query: 721 VQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQLL--AVPRYYA 778
VQPL T+F ++VEEAFRYMA GKHIGKV++++R EE + P V L A+ R +
Sbjct: 1832 VQPLRTTVFERNQVEEAFRYMAQGKHIGKVLLQVRSEESSS-SGPAVSALSIPAICRTFC 1890
Query: 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLI 838
++ SYII GGLGGFGLELA WL RGARKLVLTSRSG++NGYQA R++ W++ +QVL+
Sbjct: 1891 PASLSYIITGGLGGFGLELAQWLTERGARKLVLTSRSGIRNGYQAKRVREWQAMGIQVLV 1950
Query: 839 STDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
ST D++T G L+TEA +LGPV GIF+LA+VLKD + EN TP++F PK + T
Sbjct: 1951 STSDVSTLDGTERLITEACRLGPVGGIFHLAMVLKDGMLENLTPQEFIEVNRPKYDGTIN 2010
Query: 899 FDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWG 958
D +R CP L QFVVFSSVSCGRGNAGQ+NYG ANS MERICE RR E LPGLAV+WG
Sbjct: 2011 LDSVTRQKCPQLQQFVVFSSVSCGRGNAGQSNYGFANSTMERICEQRRQENLPGLAVQWG 2070
Query: 959 AVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKKA---G 1015
A+G+VG+V + N + VIGGTL QR+S+CLE L+ FL Q P+++S V+AEK G
Sbjct: 2071 AIGDVGVVLETMGGN-DAVIGGTLPQRMSSCLEVLDRFLCQQRPVMSSFVLAEKVVVTKG 2129
Query: 1016 SG-GATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI 1074
G G ++V+AV +ILG+RD+ +++ ++LA+LG+DS+M VE++QTLER++++ + ++I
Sbjct: 2130 EGSGQKDLVEAVAHILGVRDVNSLNADASLADLGLDSLMGVEVRQTLERDYDIVMAMREI 2189
Query: 1075 RGLTFAKLQDIAVSFENDDKSKPVSTEASGGQVTALSVEDI 1115
R LT KL++++ ++S PV + SG Q AL D+
Sbjct: 2190 RQLTINKLRELSKQSGGKEES-PV--KRSGAQ--ALLESDL 2225
|
|
| FB|FBgn0042627 v(2)k05816 "v(2)k05816" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 2187 (774.9 bits), Expect = 2.0e-263, Sum P(2) = 2.0e-263
Identities = 479/1085 (44%), Positives = 670/1085 (61%)
Query: 308 LVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCIRKETGGERTR 367
L + ++ F W+ L+ ++A + K + L++Q EP SG +G NC+++E GG R
Sbjct: 1325 LTLHLTNKQFKWVNELKNSIAKAQAEEKN-LYLVAQGEPNSGALGLMNCLKREAGGHFLR 1383
Query: 368 CFEILDKNAPPFNPEDPFYKVQVEKDLAVNILRNGQWGTYRHSILQPIKRVM-TDHAYIN 426
+ ILD+ P F+ +DPFY Q+ KDL VN+ RNG WG+YRH ++ ++ + AY+N
Sbjct: 1384 LYLILDEGVPQFSLDDPFYAAQLAKDLVVNVYRNGSWGSYRHLKMESRPPMLPVEQAYVN 1443
Query: 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIE 486
LV+GD+SSL W + P + S + +YY+ +NFRD+ML + KL + +
Sbjct: 1444 TLVKGDLSSLRWIESP-------RSSPIQSQLEPCTVYYAPLNFRDVMLASGKLGVDALP 1496
Query: 487 SRRLYQHCVIGFEYSGRLRDS-GKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAAT 545
YQ CV+G E++GR DS G+RVM + + +SLA C + + WE+P +WT+E A+T
Sbjct: 1497 GDLAYQDCVLGLEFAGR--DSCGRRVMAMVTAKSLATNCLANRNLLWEVPSKWTMEQAST 1554
Query: 546 VPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREF 605
VPCVYAT YA+ + GQM++GE ILIHAGSGGVGQAAI++A +FTTVG+ EKREF
Sbjct: 1555 VPCVYATVYYALVVRGQMKEGERILIHAGSGGVGQAAISVALAHGLTVFTTVGSKEKREF 1614
Query: 606 IRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFL 665
+ K FP +K +NIGNSRDTSFEQL+M T G GV+LVLNSL+EEKLQAS+RCLA GRFL
Sbjct: 1615 LLKRFPKLKAKNIGNSRDTSFEQLIMSETHGNGVELVLNSLSEEKLQASIRCLALNGRFL 1674
Query: 666 EIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLV 725
EIGKFDL+NN LGM VF++ TSFHG++LD+ E+E ++ + K + + I +GAVQPL
Sbjct: 1675 EIGKFDLSNNTPLGMSVFLKNTSFHGILLDSVMEGEEEMQLMVAKLVAEGIKSGAVQPLP 1734
Query: 726 RTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQLLAVPRYYADSNKSYI 785
T+F E ++E+AFR+MA+GKHIGKV+IK+R EE + P+++Q+ A+PR Y KSYI
Sbjct: 1735 TTVFAEQEIEKAFRFMASGKHIGKVVIKVRLEEEQQAALPRLRQIQAIPRSYMHPEKSYI 1794
Query: 786 ICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITT 845
+ GGLGGFGLELA+WLV RGAR LVL+SRSGVK+GYQAL I+ W VQV I T+D+TT
Sbjct: 1795 LVGGLGGFGLELANWLVSRGARFLVLSSRSGVKSGYQALMIRRWHDRGVQVQIDTNDVTT 1854
Query: 846 EAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRT 905
G LL +NKL V GIFNLA VL+D L E+Q+P++F PK AT + DK SR
Sbjct: 1855 AVGCQRLLEVSNKLALVGGIFNLAAVLRDGLIEDQSPKNFEKVSAPKLLATIHLDKISRE 1914
Query: 906 MCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGAVGEVGL 965
+CP L FV FSS+SCGRGN GQTNYG+ANS MERICE R+ G PG A++WGA+G+ GL
Sbjct: 1915 ICPALEYFVCFSSLSCGRGNMGQTNYGLANSTMERICEQRQEYGYPGTAIQWGAIGDTGL 1974
Query: 966 VADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEK-KAGSGGATNIVD 1024
+ + +N E V+GGTL QR+ +CLE L+ FL Q P++ASMVVAEK K +++
Sbjct: 1975 IIEHMGNN-ETVVGGTLPQRMISCLETLDLFLQQPHPVMASMVVAEKRKTEQANRLSLIA 2033
Query: 1025 AVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIRGLTFAKLQD 1084
+ NI+GLRD+K+VS +TL +LGMDS+M+ EIKQTLER F++ L+ Q+IR LTF+ L+
Sbjct: 2034 TIANIMGLRDVKSVSDKTTLFDLGMDSLMSTEIKQTLERHFDLVLSAQEIRQLTFSALRQ 2093
Query: 1085 IAVSFENDDKSKPVSTEASGGQVTALSVEDIPDVGIQY--LMRTIGDEILANKPVIRLPS 1142
I + S VS+ ++ ++ + E +V Q + E+L + ++RL S
Sbjct: 2094 IDAQ---EPPSASVSSPSASSTLSRIKEEACVEVQPQSDETRKVFAKEVLPQEVMVRLRS 2150
Query: 1143 LKNNGSTVEEPVGNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTNPPDTIPEMA 1202
S E+P F+ P IEG +E LA ++ Q P D+I A
Sbjct: 2151 KAPVAS--EDPA----VFFLAP-IEGFTIAVEALAASLTCPAYGLQCTEQVPLDSIEACA 2203
Query: 1203 DSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKCHLYLVDSAPD----YV 1258
L +K G I VG+S+G ++A +A+ LEQ + ++D AP YV
Sbjct: 2204 AYYLRQIQKLQPLGPYHI--VGYSYGCLLAHAIAVALEQRRFGVKVIMLDGAPTMASGYV 2261
Query: 1259 LTSLRKLPDWNAK----LNYFLDLMPEDATHSRTYQ-----RNLAHAAYKRITSILKYTD 1309
+ ++ D N + L YF L+ D +++ Q + K ++ YT
Sbjct: 2262 QEAKKQTDDLNRQQSMTLAYFGALLA-DVDYNQLLQLLDGVQTWPSKLDKLADTLAGYTQ 2320
Query: 1310 PKHKAFGGNITLLRPTEQALPTAEDY-GLSKVCKKPVKVHFVDGNHFTVLD----NIKSA 1364
+ + + Q L +E Y G ++ V + + N D I SA
Sbjct: 2321 QTREVIKKAACMFK---QKLLLSESYKGAKQLHSDVVLIKSAEHNAIMAQDYGLKEICSA 2377
Query: 1365 QIIMH 1369
QI MH
Sbjct: 2378 QIDMH 2382
|
|
| MGI|MGI:95485 Fasn "fatty acid synthase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1989 (705.2 bits), Expect = 4.1e-261, Sum P(4) = 4.1e-261
Identities = 397/805 (49%), Positives = 549/805 (68%)
Query: 307 PLVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCIRKETGGERT 366
P+ + V F W+ L+ LA TS+ Q + L + P SG++G NC+RKE GG R
Sbjct: 1406 PIFLSVEDTSFQWVDSLKSTLA---TSSSQPVWLTAMDCPTSGVVGLVNCLRKEPGGHRI 1462
Query: 367 RCFEILD----KNAPPFNPEDPFYKVQVEKDLAVNILRNGQWGTYRHSILQPIK-RVMTD 421
RC + + +AP +P P + ++ DL +N+ R+G WG +RH L+ K + T
Sbjct: 1463 RCILLSNLSNTSHAPKLDPGSPELQQVLKHDLVMNVYRDGAWGAFRHFQLEQDKPKEQTA 1522
Query: 422 HAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLA 481
HA++N L RGD++S+ W P+ K + + +YY+S+NFRDIML T KL+
Sbjct: 1523 HAFVNVLTRGDLASIRWVSSPL-----KHTQPSSSGAQLCTVYYASLNFRDIMLATGKLS 1577
Query: 482 PEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLE 541
P+ I + + C++G E+SGR R G+RVMGL LA + W++P WTLE
Sbjct: 1578 PDAIPGKWASRDCMLGMEFSGRDR-CGRRVMGLVPAEGLATSVLLSSDFLWDVPSSWTLE 1636
Query: 542 DAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPE 601
+AA+VP VY TA Y++ + G++Q+GE++LIH+GSGGVGQAAI++A + +FTTVG+ E
Sbjct: 1637 EAASVPVVYTTAYYSLVVRGRIQRGETVLIHSGSGGVGQAAISIALSLGCRVFTTVGSAE 1696
Query: 602 KREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQG 661
KR +++ FP + + + NSRDTSFEQ V+ T G+GVDLVLNSLAEEKLQASVRCLAQ
Sbjct: 1697 KRAYLQARFPQLDDTSFANSRDTSFEQHVLLHTGGKGVDLVLNSLAEEKLQASVRCLAQH 1756
Query: 662 GRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFF-AEQEWKMSLQKALQKAIDAGA 720
GRFLEIGKFDL+NN+ LGM +F++ +FHG++LD F A W+ + L+ I G
Sbjct: 1757 GRFLEIGKFDLSNNHPLGMAIFLKNVTFHGILLDALFEEANDSWR-EVAALLKAGIRDGV 1815
Query: 721 VQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQLL-AVPRYYAD 779
V+PL T+FP+ +VE+AFRYMA GKHIGKV++++R+EEP + L+ A+ + +
Sbjct: 1816 VKPLKCTVFPKAQVEDAFRYMAQGKHIGKVLVQVREEEPEAVLPGAQPTLISAISKTFCP 1875
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
++KSYII GGLGGFGLELA WLVLRGA++LVLTSRSG++ GYQA I+ W+ +QVL+S
Sbjct: 1876 AHKSYIITGGLGGFGLELARWLVLRGAQRLVLTSRSGIRTGYQAKHIREWRRQGIQVLVS 1935
Query: 840 TDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYF 899
T ++++ G L+ EA KLGPV G+FNLA+VL+DA+ ENQTPE F PK N T
Sbjct: 1936 TSNVSSLEGARALIAEATKLGPVGGVFNLAMVLRDAMLENQTPELFQDVNKPKYNGTLNL 1995
Query: 900 DKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGA 959
D+ +R CP L FV FSSVSCGRGNAGQTNYG ANS MERICE RR +GLPGLAV+WGA
Sbjct: 1996 DRATREACPELDYFVAFSSVSCGRGNAGQTNYGFANSTMERICEQRRHDGLPGLAVQWGA 2055
Query: 960 VGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKKA---GS 1016
+G+VG+V + N + VIGGTL QRIS+C+E L+ FL Q +++S V+AEKKA G
Sbjct: 2056 IGDVGIVLEAMGTN-DTVIGGTLPQRISSCMEVLDLFLNQPHAVLSSFVLAEKKAVAHGD 2114
Query: 1017 GGAT-NIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIR 1075
G ++V AV +ILG+RDL ++L STLA+LG+DS+M VE++Q LERE ++ L +++R
Sbjct: 2115 GDTQRDLVKAVAHILGIRDLAGINLDSTLADLGLDSLMGVEVRQILEREHDLVLPMREVR 2174
Query: 1076 GLTFAKLQDIAVSFEN-DDKSKPVS 1099
LT KLQ+++ ++ D + P S
Sbjct: 2175 QLTLRKLQEMSSKTDSATDTTAPKS 2199
|
|
| RGD|620665 Fasn "fatty acid synthase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1956 (693.6 bits), Expect = 6.7e-257, Sum P(4) = 6.7e-257
Identities = 392/798 (49%), Positives = 545/798 (68%)
Query: 307 PLVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCIRKETGGERT 366
P+ + V F W+ L+ LA TS+ Q + L + P SG++G NC+RKE GG R
Sbjct: 1406 PIFLPVEDTSFQWVDSLKSILA---TSSSQPVWLTAMNCPTSGVVGLVNCLRKEPGGHRI 1462
Query: 367 RCFEILDKNAPPFNPE-DP----FYKVQVEKDLAVNILRNGQWGTYRHSILQPIK-RVMT 420
RC + + ++ P+ DP KV +E DL +N+ R+G WG +RH L+ K T
Sbjct: 1463 RCILLSNLSSTSHVPKLDPGSSELQKV-LESDLVMNVYRDGAWGAFRHFQLEQDKPEEQT 1521
Query: 421 DHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKL 480
HA++N L RGD++S+ W P +K + S + +YY+S+NFRDIML T KL
Sbjct: 1522 AHAFVNVLTRGDLASIRWVSSP--LKHMQPPSSSGAQ--LCTVYYASLNFRDIMLATGKL 1577
Query: 481 APEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTL 540
+P+ I + + C++G E+SGR + G+RVMGL LA + W++P WTL
Sbjct: 1578 SPDAIPGKWASRDCMLGMEFSGRDK-CGRRVMGLVPAEGLATSVLLSPDFLWDVPSSWTL 1636
Query: 541 EDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTP 600
E+AA+VP VY TA Y++ + G++Q GE++LIH+GSGGVGQAAI++A + +FTTVG+
Sbjct: 1637 EEAASVPVVYTTAYYSLVVRGRIQHGETVLIHSGSGGVGQAAISIALSLGCRVFTTVGSA 1696
Query: 601 EKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQ 660
EKR +++ FP + + + NSRDTSFEQ V+ T G+GVDLVLNSLAEEKLQASVRCLAQ
Sbjct: 1697 EKRAYLQARFPQLDDTSFANSRDTSFEQHVLLHTGGKGVDLVLNSLAEEKLQASVRCLAQ 1756
Query: 661 GGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFF-AEQEWKMSLQKALQKAIDAG 719
GRFLEIGKFDL+NN+ LGM +F++ +FHG++LD F A W+ + + L+ I G
Sbjct: 1757 HGRFLEIGKFDLSNNHPLGMAIFLKNVTFHGILLDALFEGANDSWR-EVAELLKAGIRDG 1815
Query: 720 AVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQLL-AVPRYYA 778
V+PL T+FP+ +VE+AFRYMA GKHIGKV++++R+EEP + L+ A+ + +
Sbjct: 1816 VVKPLKCTVFPKAQVEDAFRYMAQGKHIGKVLVQVREEEPEAMLPGAQPTLISAISKTFC 1875
Query: 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLI 838
+KSYII GGLGGFGLELA WLVLRGA++LVLTSRSG++ GYQA ++ W+ + VL+
Sbjct: 1876 PEHKSYIITGGLGGFGLELARWLVLRGAQRLVLTSRSGIRTGYQAKHVREWRRQGIHVLV 1935
Query: 839 STDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
ST ++++ G L+ EA KLGPV G+FNLA+VL+DA+ ENQTPE F PK N T
Sbjct: 1936 STSNVSSLEGARALIAEATKLGPVGGVFNLAMVLRDAMLENQTPELFQDVNKPKYNGTLN 1995
Query: 899 FDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWG 958
D+ +R CP L FV FSSVSCGRGNAGQ+NYG ANS MERICE RR +GLPGLAV+WG
Sbjct: 1996 LDRATREACPELDYFVAFSSVSCGRGNAGQSNYGFANSTMERICEQRRHDGLPGLAVQWG 2055
Query: 959 AVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKKA---G 1015
A+G+VG++ + N + V+GGTL QRIS+C+E L+ FL Q +++S V+AEKKA G
Sbjct: 2056 AIGDVGIILEAMGTN-DTVVGGTLPQRISSCMEVLDLFLNQPHAVLSSFVLAEKKAVAHG 2114
Query: 1016 SGGAT-NIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI 1074
G A ++V AV +ILG+RDL ++L S+LA+LG+DS+M VE++Q LERE ++ L +++
Sbjct: 2115 DGEAQRDLVKAVAHILGIRDLAGINLDSSLADLGLDSLMGVEVRQILEREHDLVLPIREV 2174
Query: 1075 RGLTFAKLQDIAVSFEND 1092
R LT KLQ+++ +D
Sbjct: 2175 RQLTLRKLQEMSSKAGSD 2192
|
|
| UNIPROTKB|P12785 Fasn "Fatty acid synthase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1956 (693.6 bits), Expect = 6.7e-257, Sum P(4) = 6.7e-257
Identities = 392/798 (49%), Positives = 545/798 (68%)
Query: 307 PLVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCIRKETGGERT 366
P+ + V F W+ L+ LA TS+ Q + L + P SG++G NC+RKE GG R
Sbjct: 1406 PIFLPVEDTSFQWVDSLKSILA---TSSSQPVWLTAMNCPTSGVVGLVNCLRKEPGGHRI 1462
Query: 367 RCFEILDKNAPPFNPE-DP----FYKVQVEKDLAVNILRNGQWGTYRHSILQPIK-RVMT 420
RC + + ++ P+ DP KV +E DL +N+ R+G WG +RH L+ K T
Sbjct: 1463 RCILLSNLSSTSHVPKLDPGSSELQKV-LESDLVMNVYRDGAWGAFRHFQLEQDKPEEQT 1521
Query: 421 DHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKL 480
HA++N L RGD++S+ W P +K + S + +YY+S+NFRDIML T KL
Sbjct: 1522 AHAFVNVLTRGDLASIRWVSSP--LKHMQPPSSSGAQ--LCTVYYASLNFRDIMLATGKL 1577
Query: 481 APEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTL 540
+P+ I + + C++G E+SGR + G+RVMGL LA + W++P WTL
Sbjct: 1578 SPDAIPGKWASRDCMLGMEFSGRDK-CGRRVMGLVPAEGLATSVLLSPDFLWDVPSSWTL 1636
Query: 541 EDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTP 600
E+AA+VP VY TA Y++ + G++Q GE++LIH+GSGGVGQAAI++A + +FTTVG+
Sbjct: 1637 EEAASVPVVYTTAYYSLVVRGRIQHGETVLIHSGSGGVGQAAISIALSLGCRVFTTVGSA 1696
Query: 601 EKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQ 660
EKR +++ FP + + + NSRDTSFEQ V+ T G+GVDLVLNSLAEEKLQASVRCLAQ
Sbjct: 1697 EKRAYLQARFPQLDDTSFANSRDTSFEQHVLLHTGGKGVDLVLNSLAEEKLQASVRCLAQ 1756
Query: 661 GGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFF-AEQEWKMSLQKALQKAIDAG 719
GRFLEIGKFDL+NN+ LGM +F++ +FHG++LD F A W+ + + L+ I G
Sbjct: 1757 HGRFLEIGKFDLSNNHPLGMAIFLKNVTFHGILLDALFEGANDSWR-EVAELLKAGIRDG 1815
Query: 720 AVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQLL-AVPRYYA 778
V+PL T+FP+ +VE+AFRYMA GKHIGKV++++R+EEP + L+ A+ + +
Sbjct: 1816 VVKPLKCTVFPKAQVEDAFRYMAQGKHIGKVLVQVREEEPEAMLPGAQPTLISAISKTFC 1875
Query: 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLI 838
+KSYII GGLGGFGLELA WLVLRGA++LVLTSRSG++ GYQA ++ W+ + VL+
Sbjct: 1876 PEHKSYIITGGLGGFGLELARWLVLRGAQRLVLTSRSGIRTGYQAKHVREWRRQGIHVLV 1935
Query: 839 STDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
ST ++++ G L+ EA KLGPV G+FNLA+VL+DA+ ENQTPE F PK N T
Sbjct: 1936 STSNVSSLEGARALIAEATKLGPVGGVFNLAMVLRDAMLENQTPELFQDVNKPKYNGTLN 1995
Query: 899 FDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWG 958
D+ +R CP L FV FSSVSCGRGNAGQ+NYG ANS MERICE RR +GLPGLAV+WG
Sbjct: 1996 LDRATREACPELDYFVAFSSVSCGRGNAGQSNYGFANSTMERICEQRRHDGLPGLAVQWG 2055
Query: 959 AVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKKA---G 1015
A+G+VG++ + N + V+GGTL QRIS+C+E L+ FL Q +++S V+AEKKA G
Sbjct: 2056 AIGDVGIILEAMGTN-DTVVGGTLPQRISSCMEVLDLFLNQPHAVLSSFVLAEKKAVAHG 2114
Query: 1016 SGGAT-NIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI 1074
G A ++V AV +ILG+RDL ++L S+LA+LG+DS+M VE++Q LERE ++ L +++
Sbjct: 2115 DGEAQRDLVKAVAHILGIRDLAGINLDSSLADLGLDSLMGVEVRQILEREHDLVLPIREV 2174
Query: 1075 RGLTFAKLQDIAVSFEND 1092
R LT KLQ+++ +D
Sbjct: 2175 RQLTLRKLQEMSSKAGSD 2192
|
|
| UNIPROTKB|F1N8A8 FASN "Fatty acid synthase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1981 (702.4 bits), Expect = 2.0e-255, Sum P(4) = 2.0e-255
Identities = 402/827 (48%), Positives = 569/827 (68%)
Query: 300 KSPVKISPLVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCIRK 359
+SP K +P+++ V + W+ L++ LA S++Q + L + SGI+G NC+R
Sbjct: 1411 QSPAK-APILLPVDDTHYKWVDSLKEILA---DSSEQPLWLTATNCGNSGILGMVNCLRL 1466
Query: 360 ETGGERTRCFEILDKNAPPFNPEDPFYKVQ----VEKDLAVNILRNGQWGTYRHSILQPI 415
E G R RC + + + P ++ +E+DL +N+ R+G+WG++RH LQ
Sbjct: 1467 EAEGHRIRCVFVSNLSPSSTVPATSLSSLEMQKIIERDLVMNVYRDGKWGSFRHLPLQQA 1526
Query: 416 K-RVMTDHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIM 474
+ + +T++AY+N L RGD+SSL W P+ + + N N + ++YY+S+NFRDIM
Sbjct: 1527 QPQELTEYAYVNVLTRGDLSSLRWIVSPL-----RHFQTTNPNVQLCKVYYASLNFRDIM 1581
Query: 475 LTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-SGKRVMGLTSGRSLANCCETDVEMAWE 533
L T KL+P+ I Q C++G E+SGR D +G+RVMGL + LA + D WE
Sbjct: 1582 LATGKLSPDAIPGNWTLQQCMLGMEFSGR--DLAGRRVMGLLPAKGLATVVDCDKRFLWE 1639
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
+P+ WTLE+AA+VP VYATA YA+ + G M+KGES+LIH+GSGGVGQAAI +A M +
Sbjct: 1640 VPENWTLEEAASVPVVYATAYYALVVRGGMKKGESVLIHSGSGGVGQAAIAIALSMGCRV 1699
Query: 594 FTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQA 653
F TVG+ EKRE+++ FP + + +SR+T+FEQ +++ T G+GV+LVLNSLAEEKLQA
Sbjct: 1700 FATVGSAEKREYLQARFPQLDANSFASSRNTTFEQHILRVTNGKGVNLVLNSLAEEKLQA 1759
Query: 654 SVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFF-AEQEWKMSLQKAL 712
S+RCLAQ GRFLEIGKFDL+NN+ LGM +F++ +FHG++LD+ F QEW++ + + L
Sbjct: 1760 SLRCLAQHGRFLEIGKFDLSNNSQLGMALFLKNVAFHGILLDSIFEEGNQEWEV-VSELL 1818
Query: 713 QKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQLLA 772
K I G V+PL T+F +++VE AFR+MA GKHIGKV+IKI++EE + +L A
Sbjct: 1819 TKGIKDGVVKPLRTTVFGKEEVEAAFRFMAQGKHIGKVMIKIQEEEKQYPLRSEPVKLSA 1878
Query: 773 VPRYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY 832
+ R KSYII GGLGGFGLELA WL+ RGA+KLVLTSRSG++ GYQA ++ WK+
Sbjct: 1879 ISRTSCPPTKSYIITGGLGGFGLELAQWLIERGAQKLVLTSRSGIRTGYQAKCVREWKAL 1938
Query: 833 DVQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPK 892
+QVL+ST D+ T G L+ EA KLGPV GIFNLAVVLKDA+ ENQTPE F PK
Sbjct: 1939 GIQVLVSTSDVGTLEGTQLLIEEALKLGPVGGIFNLAVVLKDAMIENQTPELFWEVNKPK 1998
Query: 893 ANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPG 952
+ T + D +R CP L FVVFSSVSCGRGNAGQ+NYG ANS MERICE R +GLPG
Sbjct: 1999 YSGTLHLDWVTRKKCPDLDYFVVFSSVSCGRGNAGQSNYGFANSAMERICEQRHHDGLPG 2058
Query: 953 LAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEK 1012
LAV+WGA+G+VG++ M N EVVIGGT+ Q+IS+CLE L+ FL Q P+++S V+AEK
Sbjct: 2059 LAVQWGAIGDVGILKAMG--NREVVIGGTVLQQISSCLEVLDMFLNQPHPVMSSFVLAEK 2116
Query: 1013 ---KAGSGGATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFL 1069
K+ G ++V+AV +ILG+RD+ +++ S+LA+LG+DS+M VE++QTLER++++ +
Sbjct: 2117 VSVKSEGGSQRDLVEAVAHILGVRDVSSLNAESSLADLGLDSLMGVEVRQTLERDYDIVM 2176
Query: 1070 TPQDIRGLTFAKLQDIAVSFENDDKSKPVSTEASG-GQVTALSVEDI 1115
T ++IR LT KL++++ ++ KP +G G+ L + ++
Sbjct: 2177 TMREIRLLTINKLRELSSKTGTAEELKPSQVLKTGPGEPPKLDLNNL 2223
|
|
| UNIPROTKB|E1BW07 FASN "Fatty acid synthase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1972 (699.2 bits), Expect = 1.8e-254, Sum P(4) = 1.8e-254
Identities = 402/828 (48%), Positives = 569/828 (68%)
Query: 300 KSPVKISPLVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCIRK 359
+SP K +P+++ V + W+ L++ LA S++Q + L + SGI+G NC+R
Sbjct: 1411 QSPAK-APILLPVDDTHYKWVDSLKEILA---DSSEQPLWLTATNCGNSGILGMVNCLRL 1466
Query: 360 ETGGERTRCFEILDKNAPPFNPEDPFYKVQ----VEKDLAVNILRNGQWGTYRHSILQPI 415
E G R RC + + + P ++ +E+DL +N+ R+G+WG++RH LQ
Sbjct: 1467 EAEGHRIRCVFVSNLSPSSTVPATSLSSLEMQKIIERDLVMNVYRDGKWGSFRHLPLQQA 1526
Query: 416 K-RVMTDHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIM 474
+ + +T++AY+N L RGD+SSL W P+ + + N N + ++YY+S+NFRDIM
Sbjct: 1527 QPQELTEYAYVNVLTRGDLSSLRWIVSPL-----RHFQTTNPNVQLCKVYYASLNFRDIM 1581
Query: 475 LTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-SGKRVMGLTSGRSLANCCETDVEMAWE 533
L T KL+P+ I Q C++G E+SGR D +G+RVMGL + LA + D WE
Sbjct: 1582 LATGKLSPDAIPGNWTLQQCMLGMEFSGR--DLAGRRVMGLLPAKGLATVVDCDKRFLWE 1639
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
+P+ WTLE+AA+VP VYATA YA+ + G M+KGES+LIH+GSGGVGQAAI +A M +
Sbjct: 1640 VPENWTLEEAASVPVVYATAYYALVVRGGMKKGESVLIHSGSGGVGQAAIAIALSMGCRV 1699
Query: 594 FTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQA 653
F TVG+ EKRE+++ FP + + +SR+T+FEQ +++ T G+GV+LVLNSLAEEKLQA
Sbjct: 1700 FATVGSAEKREYLQARFPQLDANSFASSRNTTFEQHILRVTNGKGVNLVLNSLAEEKLQA 1759
Query: 654 SVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFF-AEQEWKMSLQKAL 712
S+RCLAQ GRFLEIGKFDL+NN+ LGM +F++ +FHG++LD+ F QEW++ + + L
Sbjct: 1760 SLRCLAQHGRFLEIGKFDLSNNSQLGMALFLKNVAFHGILLDSIFEEGNQEWEV-VSELL 1818
Query: 713 QKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIK-IRDEEPTKICTPKVKQLL 771
K I G V+PL T+F +++VE AFR+MA GKHIGKV+IK I++EE + +L
Sbjct: 1819 TKGIKDGVVKPLRTTVFGKEEVEAAFRFMAQGKHIGKVMIKKIQEEEKQYPLRSEPVKLS 1878
Query: 772 AVPRYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS 831
A+ R KSYII GGLGGFGLELA WL+ RGA+KLVLTSRSG++ GYQA ++ WK+
Sbjct: 1879 AISRTSCPPTKSYIITGGLGGFGLELAQWLIERGAQKLVLTSRSGIRTGYQAKCVREWKA 1938
Query: 832 YDVQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGP 891
+QVL+ST D+ T G L+ EA KLGPV GIFNLAVVLKDA+ ENQTPE F P
Sbjct: 1939 LGIQVLVSTSDVGTLEGTQLLIEEALKLGPVGGIFNLAVVLKDAMIENQTPELFWEVNKP 1998
Query: 892 KANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLP 951
K + T + D +R CP L FVVFSSVSCGRGNAGQ+NYG ANS MERICE R +GLP
Sbjct: 1999 KYSGTLHLDWVTRKKCPDLDYFVVFSSVSCGRGNAGQSNYGFANSAMERICEQRHHDGLP 2058
Query: 952 GLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAE 1011
GLAV+WGA+G+VG++ M N EVVIGGT+ Q+IS+CLE L+ FL Q P+++S V+AE
Sbjct: 2059 GLAVQWGAIGDVGILKAMG--NREVVIGGTVLQQISSCLEVLDMFLNQPHPVMSSFVLAE 2116
Query: 1012 K---KAGSGGATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVF 1068
K K+ G ++V+AV +ILG+RD+ +++ S+LA+LG+DS+M VE++QTLER++++
Sbjct: 2117 KVSVKSEGGSQRDLVEAVAHILGVRDVSSLNAESSLADLGLDSLMGVEVRQTLERDYDIV 2176
Query: 1069 LTPQDIRGLTFAKLQDIAVSFENDDKSKPVSTEASG-GQVTALSVEDI 1115
+T ++IR LT KL++++ ++ KP +G G+ L + ++
Sbjct: 2177 MTMREIRLLTINKLRELSSKTGTAEELKPSQVLKTGPGEPPKLDLNNL 2224
|
|
| UNIPROTKB|P12276 FASN "Fatty acid synthase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1964 (696.4 bits), Expect = 1.3e-253, Sum P(4) = 1.3e-253
Identities = 400/827 (48%), Positives = 566/827 (68%)
Query: 300 KSPVKISPLVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCIRK 359
+SP K +P+++ V + W+ L++ LA S++Q + L + SGI+G NC+R
Sbjct: 1411 QSPAK-APILLPVDDTHYKWVDSLKEILA---DSSEQPLWLTATNCGNSGILGMVNCLRL 1466
Query: 360 ETGGERTRCFEILDKNAPPFNPEDPFYKVQ----VEKDLAVNILRNGQWGTYRHSILQPI 415
E G R RC + + + P ++ +E+DL +N+ R+G+WG++RH LQ
Sbjct: 1467 EAEGHRIRCVFVSNLSPSSTVPATSLSSLEMQKIIERDLVMNVYRDGKWGSFRHLPLQQA 1526
Query: 416 K-RVMTDHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIM 474
+ + +T+ AY+N L RGD+SSL W P+ + + N N + ++YY+S+NF DIM
Sbjct: 1527 QPQELTECAYVNVLTRGDLSSLRWIVSPL-----RHFQTTNPNVQLCKVYYASLNFWDIM 1581
Query: 475 LTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-SGKRVMGLTSGRSLANCCETDVEMAWE 533
L T KL+P+ I Q C++G E+SGR D +G+RVMGL + LA + D WE
Sbjct: 1582 LATGKLSPDAIPGNWTLQQCMLGMEFSGR--DLAGRRVMGLLPAKGLATVVDCDKRFLWE 1639
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
+P+ WTLE+AA+VP VYATA YA+ + G M+KGES+LIH+GSGGVGQAAI +A M +
Sbjct: 1640 VPENWTLEEAASVPVVYATAYYALVVRGGMKKGESVLIHSGSGGVGQAAIAIALSMGCRV 1699
Query: 594 FTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQA 653
F TVG+ EKRE+++ FP + + +SR+T+F+Q +++ T G+GV LVLNSLAEEKLQA
Sbjct: 1700 FATVGSAEKREYLQARFPQLDANSFASSRNTTFQQHILRVTNGKGVSLVLNSLAEEKLQA 1759
Query: 654 SVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFF-AEQEWKMSLQKAL 712
S+RCLAQ GRFLEIGKFDL+NN+ LGM +F++ +FHG++LD+ F QEW++ + + L
Sbjct: 1760 SLRCLAQHGRFLEIGKFDLSNNSQLGMALFLKNVAFHGILLDSIFEEGNQEWEV-VSELL 1818
Query: 713 QKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQLLA 772
K I G V+PL T+F +++VE AFR+MA GKHIGKV+IKI++EE + +L A
Sbjct: 1819 TKGIKDGVVKPLRTTVFGKEEVEAAFRFMAQGKHIGKVMIKIQEEEKQYPLRSEPVKLSA 1878
Query: 773 VPRYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY 832
+ R KSYII GGLGGFGLELA WL+ RGA+KLVLTSRSG++ GYQA ++ WK+
Sbjct: 1879 ISRTSCPPTKSYIITGGLGGFGLELAQWLIERGAQKLVLTSRSGIRTGYQAKCVREWKAL 1938
Query: 833 DVQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPK 892
+QVL+ST D+ T G L+ EA KLGPV GIFNLAVVLKDA+ ENQTPE F PK
Sbjct: 1939 GIQVLVSTSDVGTLEGTQLLIEEALKLGPVGGIFNLAVVLKDAMIENQTPELFWEVNKPK 1998
Query: 893 ANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPG 952
+ T + D +R CP L FVVFSSVSCGRGNAGQ+NYG ANS MERICE R +GLPG
Sbjct: 1999 YSGTLHLDWVTRKKCPDLDYFVVFSSVSCGRGNAGQSNYGFANSAMERICEQRHHDGLPG 2058
Query: 953 LAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEK 1012
LAV+WGA+G+VG++ M N EVVIGGT+ Q+IS+CLE L+ FL Q P+++S V+AEK
Sbjct: 2059 LAVQWGAIGDVGILKAMG--NREVVIGGTVLQQISSCLEVLDMFLNQPHPVMSSFVLAEK 2116
Query: 1013 ---KAGSGGATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFL 1069
K+ G ++V+AV +ILG+RD+ +++ S+LA+LG+DS+M VE++QTLER++++ +
Sbjct: 2117 VSVKSEGGSQRDLVEAVAHILGVRDVSSLNAESSLADLGLDSLMGVEVRQTLERDYDIVM 2176
Query: 1070 TPQDIRGLTFAKLQDIAVSFENDDKSKPVSTEASG-GQVTALSVEDI 1115
T ++IR LT KL++++ ++ KP +G G+ L + ++
Sbjct: 2177 TMREIRLLTINKLRELSSKTGTAEELKPSQVLKTGPGEPPKLDLNNL 2223
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.1.1 | LOW CONFIDENCE prediction! |
| 3rd Layer | 1.3.1.10 | LOW CONFIDENCE prediction! |
| 3rd Layer | 2.3.1.38 | 0.737 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1392 | |||
| smart00829 | 287 | smart00829, PKS_ER, Enoylreductase | 1e-117 | |
| cd05195 | 293 | cd05195, enoyl_red, enoyl reductase of polyketide | 1e-107 | |
| cd08954 | 452 | cd08954, KR_1_FAS_SDR_x, beta-ketoacyl reductase ( | 3e-77 | |
| smart00822 | 180 | smart00822, PKS_KR, This enzymatic domain is part | 1e-57 | |
| cd05274 | 375 | cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt | 5e-53 | |
| cd05276 | 323 | cd05276, p53_inducible_oxidoreductase, PIG3 p53-in | 7e-50 | |
| pfam08659 | 181 | pfam08659, KR, KR domain | 2e-49 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 4e-49 | |
| cd08241 | 323 | cd08241, QOR1, Quinone oxidoreductase (QOR) | 2e-46 | |
| cd08251 | 303 | cd08251, polyketide_synthase, polyketide synthase | 9e-46 | |
| cd08955 | 376 | cd08955, KR_2_FAS_SDR_x, beta-ketoacyl reductase ( | 5e-40 | |
| COG0604 | 326 | COG0604, Qor, NADPH:quinone reductase and related | 6e-40 | |
| cd08266 | 342 | cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t | 1e-39 | |
| TIGR02824 | 325 | TIGR02824, quinone_pig3, putative NAD(P)H quinone | 3e-39 | |
| cd08275 | 337 | cd08275, MDR3, Medium chain dehydrogenases/reducta | 5e-35 | |
| cd08272 | 326 | cd08272, MDR6, Medium chain dehydrogenases/reducta | 9e-32 | |
| cd05188 | 271 | cd05188, MDR, Medium chain reductase/dehydrogenase | 3e-30 | |
| cd08253 | 325 | cd08253, zeta_crystallin, Zeta-crystallin with NAD | 5e-30 | |
| cd08953 | 436 | cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup | 1e-29 | |
| cd08276 | 336 | cd08276, MDR7, Medium chain dehydrogenases/reducta | 5e-29 | |
| cd08268 | 328 | cd08268, MDR2, Medium chain dehydrogenases/reducta | 1e-27 | |
| PTZ00354 | 334 | PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi | 6e-27 | |
| cd05289 | 309 | cd05289, MDR_like_2, alcohol dehydrogenase and qui | 6e-27 | |
| cd08267 | 319 | cd08267, MDR1, Medium chain dehydrogenases/reducta | 9e-27 | |
| cd08271 | 325 | cd08271, MDR5, Medium chain dehydrogenases/reducta | 2e-25 | |
| cd08952 | 480 | cd08952, KR_1_SDR_x, ketoreductase (KR), subgroup | 2e-23 | |
| cd08259 | 332 | cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD | 1e-21 | |
| cd08956 | 448 | cd08956, KR_3_FAS_SDR_x, beta-ketoacyl reductase ( | 2e-21 | |
| cd05286 | 320 | cd05286, QOR2, Quinone oxidoreductase (QOR) | 8e-21 | |
| cd08273 | 331 | cd08273, MDR8, Medium chain dehydrogenases/reducta | 1e-18 | |
| cd08249 | 339 | cd08249, enoyl_reductase_like, enoyl_reductase_lik | 8e-18 | |
| pfam00107 | 131 | pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | 5e-16 | |
| cd08250 | 329 | cd08250, Mgc45594_like, Mgc45594 gene product and | 2e-15 | |
| pfam13602 | 129 | pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas | 4e-15 | |
| COG1064 | 339 | COG1064, AdhP, Zn-dependent alcohol dehydrogenases | 4e-15 | |
| cd08244 | 324 | cd08244, MDR_enoyl_red, Possible enoyl reductase | 4e-15 | |
| cd05278 | 347 | cd05278, FDH_like, Formaldehyde dehydrogenases | 4e-14 | |
| pfam00975 | 224 | pfam00975, Thioesterase, Thioesterase domain | 4e-14 | |
| cd05282 | 323 | cd05282, ETR_like, 2-enoyl thioester reductase-lik | 8e-14 | |
| cd08248 | 350 | cd08248, RTN4I1, Human Reticulon 4 Interacting Pro | 9e-14 | |
| PRK13771 | 334 | PRK13771, PRK13771, putative alcohol dehydrogenase | 2e-13 | |
| COG2130 | 340 | COG2130, COG2130, Putative NADP-dependent oxidored | 8e-13 | |
| cd08243 | 320 | cd08243, quinone_oxidoreductase_like_1, Quinone ox | 1e-12 | |
| COG1063 | 350 | COG1063, Tdh, Threonine dehydrogenase and related | 3e-12 | |
| cd05288 | 329 | cd05288, PGDH, Prostaglandin dehydrogenases | 3e-12 | |
| cd08274 | 350 | cd08274, MDR9, Medium chain dehydrogenases/reducta | 5e-12 | |
| cd08260 | 345 | cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD | 9e-12 | |
| cd08235 | 343 | cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas | 2e-11 | |
| cd08270 | 305 | cd08270, MDR4, Medium chain dehydrogenases/reducta | 1e-10 | |
| cd08263 | 367 | cd08263, Zn_ADH10, Alcohol dehydrogenases of the M | 1e-10 | |
| PRK05557 | 248 | PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) | 6e-10 | |
| TIGR01751 | 398 | TIGR01751, crot-CoA-red, crotonyl-CoA reductase | 7e-10 | |
| cd08246 | 393 | cd08246, crotonyl_coA_red, crotonyl-CoA reductase | 2e-09 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 2e-09 | |
| cd08254 | 338 | cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e | 4e-09 | |
| cd08954 | 452 | cd08954, KR_1_FAS_SDR_x, beta-ketoacyl reductase ( | 1e-08 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 1e-08 | |
| cd08261 | 337 | cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD | 2e-08 | |
| cd08236 | 343 | cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog | 2e-08 | |
| smart00823 | 86 | smart00823, PKS_PP, Phosphopantetheine attachment | 2e-08 | |
| PRK09072 | 263 | PRK09072, PRK09072, short chain dehydrogenase; Pro | 3e-08 | |
| COG3319 | 257 | COG3319, COG3319, Thioesterase domains of type I p | 3e-08 | |
| cd08231 | 361 | cd08231, MDR_TM0436_like, Hypothetical enzyme TM04 | 5e-08 | |
| cd08297 | 341 | cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA | 8e-08 | |
| TIGR01830 | 239 | TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier | 1e-07 | |
| cd08239 | 339 | cd08239, THR_DH_like, L-threonine dehydrogenase (T | 1e-07 | |
| cd08247 | 352 | cd08247, AST1_like, AST1 is a cytoplasmic protein | 2e-07 | |
| cd05333 | 240 | cd05333, BKR_SDR_c, beta-Keto acyl carrier protein | 3e-07 | |
| PRK10754 | 327 | PRK10754, PRK10754, quinone oxidoreductase, NADPH- | 3e-07 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-07 | |
| cd08245 | 330 | cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD | 4e-07 | |
| cd05285 | 343 | cd05285, sorbitol_DH, Sorbitol dehydrogenase | 5e-07 | |
| PRK12825 | 249 | PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) | 8e-07 | |
| cd08258 | 306 | cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD | 1e-06 | |
| TIGR02813 | 2582 | TIGR02813, omega_3_PfaA, polyketide-type polyunsat | 1e-06 | |
| COG1062 | 366 | COG1062, AdhC, Zn-dependent alcohol dehydrogenases | 2e-06 | |
| cd02266 | 186 | cd02266, SDR, Short-chain dehydrogenases/reductase | 2e-06 | |
| pfam00550 | 66 | pfam00550, PP-binding, Phosphopantetheine attachme | 7e-06 | |
| cd08279 | 363 | cd08279, Zn_ADH_class_III, Class III alcohol dehyd | 8e-06 | |
| cd05281 | 341 | cd05281, TDH, Threonine dehydrogenase | 9e-06 | |
| cd08932 | 223 | cd08932, HetN_like_SDR_c, HetN oxidoreductase-like | 1e-05 | |
| PRK12824 | 245 | PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro | 4e-05 | |
| cd08939 | 239 | cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine | 9e-05 | |
| cd11731 | 198 | cd11731, Lin1944_like_SDR_c, Lin1944 and related p | 1e-04 | |
| cd08290 | 341 | cd08290, ETR, 2-enoyl thioester reductase (ETR) | 1e-04 | |
| PRK12828 | 239 | PRK12828, PRK12828, short chain dehydrogenase; Pro | 3e-04 | |
| cd08252 | 336 | cd08252, AL_MDR, Arginate lyase and other MDR fami | 4e-04 | |
| cd08296 | 333 | cd08296, CAD_like, Cinnamyl alcohol dehydrogenases | 5e-04 | |
| cd08255 | 277 | cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro | 7e-04 | |
| TIGR01829 | 242 | TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta | 7e-04 | |
| cd08285 | 351 | cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd | 9e-04 | |
| cd05280 | 325 | cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ | 0.002 | |
| cd08284 | 344 | cd08284, FDH_like_2, Glutathione-dependent formald | 0.002 | |
| cd05344 | 253 | cd05344, BKR_like_SDR_like, putative beta-ketoacyl | 0.002 | |
| cd05283 | 337 | cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA | 0.003 | |
| PRK06198 | 260 | PRK06198, PRK06198, short chain dehydrogenase; Pro | 0.003 | |
| PRK07791 | 286 | PRK07791, PRK07791, short chain dehydrogenase; Pro | 0.004 |
| >gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase | Back alignment and domain information |
|---|
Score = 366 bits (943), Expect = e-117
Identities = 127/300 (42%), Positives = 178/300 (59%), Gaps = 23/300 (7%)
Query: 462 QIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR---------DSGKRVM 512
++ + +NFRD+++ E V+G E +G + G RVM
Sbjct: 2 EVRAAGLNFRDVLIALGLYPGEA----------VLGGECAGVVTRVGPGVTGLAVGDRVM 51
Query: 513 GLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIH 572
GL G + A TD + IPD W+ E+AATVP V+ TA YA+ +++ GES+LIH
Sbjct: 52 GLAPG-AFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAYYALVDLARLRPGESVLIH 110
Query: 573 AGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMK 632
A +GGVGQAAI LAR++ AE+F T G+PEKR+F+R I +++I +SRD SF +++
Sbjct: 111 AAAGGVGQAAIQLARHLGAEVFATAGSPEKRDFLR--ALGIPDDHIFSSRDLSFADEILR 168
Query: 633 RTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGV 692
T GRGVD+VLNSL+ E L AS+RCLA GGRF+EIGK D+ +N+ L M F S+H V
Sbjct: 169 ATGGRGVDVVLNSLSGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLAMAPFRPNVSYHAV 228
Query: 693 MLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752
LD + L + + G ++PL T+FP E+AFRYM GKHIGKV++
Sbjct: 229 DLD-ALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDAEDAFRYMQQGKHIGKVVL 287
|
Enoylreductase in Polyketide synthases. Length = 287 |
| >gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Score = 339 bits (872), Expect = e-107
Identities = 126/303 (41%), Positives = 179/303 (59%), Gaps = 27/303 (8%)
Query: 462 QIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD---------SGKRVM 512
++ + +NFRD++ V +G E SG + G RVM
Sbjct: 6 EVKAAGLNFRDVL---------VALGLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVM 56
Query: 513 GLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIH 572
GL G + A D + +IPD + E+AAT+P Y TA YA+ ++QKGES+LIH
Sbjct: 57 GLAPG-AFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIH 115
Query: 573 AGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMK 632
A +GGVGQAAI LA+++ AE+F TVG+ EKREF+R+ ++I +SRD SF +++
Sbjct: 116 AAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGP--VDHIFSSRDLSFADGILR 173
Query: 633 RTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGV 692
T GRGVD+VLNSL+ E L+AS RCLA GRF+EIGK D+ +N+ LGM F+R SF V
Sbjct: 174 ATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRPFLRNVSFSSV 233
Query: 693 MLDNFFFAEQEWKMSLQKALQKAID---AGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGK 749
LD E L++ L++ ++ AG ++PL T+ P +AFR M +GKHIGK
Sbjct: 234 DLDQLARERPEL---LRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGK 290
Query: 750 VII 752
V++
Sbjct: 291 VVL 293
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293 |
| >gnl|CDD|187657 cd08954, KR_1_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 1, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 263 bits (673), Expect = 3e-77
Identities = 92/245 (37%), Positives = 138/245 (56%), Gaps = 11/245 (4%)
Query: 774 PRYYADSNKSYIICGGLGGFGLELADWLVLRGARK-LVLTSRSGVKNGYQALRIKIWKSY 832
Y + KSY+I GG GG GLE+ WLV RGA + +++ SRSG+K L I+ WKS
Sbjct: 211 TNYPINLGKSYLITGGSGGLGLEILKWLVKRGAVENIIILSRSGMKWE-LELLIREWKSQ 269
Query: 833 D---VQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASL 889
+ V + D+++ +NL+ A K+GP+ GIF+LA VL D + E T F +
Sbjct: 270 NIKFHFVSVDVSDVSSLEKAINLILNAPKIGPIGGIFHLAFVLIDKVLEIDTESLFISVN 329
Query: 890 GPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEG 949
K S C L FV+FSSVS RG+AGQ NY ANS+++ + R++ G
Sbjct: 330 KAKVMGAINLHNQSIKRCWKLDYFVLFSSVSSIRGSAGQCNYVCANSVLDSLSRYRKSIG 389
Query: 950 LPGLAVEWGAVGEVGLVADMAEDNLEVVIG--GTLQQRISNCLECLNEFL--IQSEPIVA 1005
LP +A+ WGA+G+VG V+ ++++ ++G G L Q I++CL L+ FL +++
Sbjct: 390 LPSIAINWGAIGDVGFVSRN--ESVDTLLGGQGLLPQSINSCLGTLDLFLQNPSPNLVLS 447
Query: 1006 SMVVA 1010
S A
Sbjct: 448 SFNFA 452
|
NADP-dependent KR domain of the multidomain type I FAS, a complex SDR family. This subfamily also includes proteins identified as polyketide synthase (PKS), a protein with related modular protein architecture and similar function. It includes the KR domains of mammalian and chicken FAS, and Dictyostelium discoideum putative polyketide synthases (PKSs). These KR domains contain two subdomains, each of which is related to SDR Rossmann fold domains. However, while the C-terminal subdomain has an active site similar to the other SDRs and a NADP-binding capability, the N-terminal SDR-like subdomain is truncated and lacks these functions, serving a supportive structural role. In some instances, such as porcine FAS, an enoyl reductase (a Rossman fold NAD-binding domain of the medium-chain dehydrogenase/reductase, MDR family) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-ketoacyl reductase (KR), forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-enoyl reductase (ER); this KR and ER are members of the SDR family. This KR subfamily has an active site tetrad with a similar 3D orientation compared to archetypical SDRs, but the active site Lys and Asn residue positions are swapped. The characteristic NADP-binding is typical of the multidomain complex SDRs, with a GGXGXXG NADP binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 452 |
| >gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases | Back alignment and domain information |
|---|
Score = 196 bits (502), Expect = 1e-57
Identities = 68/182 (37%), Positives = 96/182 (52%), Gaps = 3/182 (1%)
Query: 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTD 841
+Y+I GGLGG G LA WL RGAR+LVL SRSG A + ++ +V +
Sbjct: 1 GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVAC 60
Query: 842 DITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFD 900
D+ + +L GP+ G+ + A VL D + + TPE F A L PKA
Sbjct: 61 DVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLASLTPERFAAVLAPKAAGAWNLH 120
Query: 901 KYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGAV 960
+ + L FV+FSS++ G+ GQ NY AN+ ++ + E RRA GLP L++ WGA
Sbjct: 121 ELTA--DLPLDFFVLFSSIAGVLGSPGQANYAAANAFLDALAEYRRARGLPALSIAWGAW 178
Query: 961 GE 962
E
Sbjct: 179 AE 180
|
It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180 |
| >gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs | Back alignment and domain information |
|---|
Score = 190 bits (485), Expect = 5e-53
Identities = 80/238 (33%), Positives = 111/238 (46%), Gaps = 18/238 (7%)
Query: 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVL 837
+ +Y+I GGLGG GL +A WL RGAR LVL SR G A R + ++ +V
Sbjct: 147 GGLDGTYLITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAA-RAALLRAGGARVS 205
Query: 838 ISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATK 897
+ D+T A + LL E GP+ G+ + A VL+DAL TP F A L K
Sbjct: 206 VVRCDVTDPAALAALLAELAAGGPLAGVIHAAGVLRDALLAELTPAAFAAVLAAKVAGA- 264
Query: 898 YFDKYSRTMCPTLGQ-----FVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPG 952
+ FV+FSSV+ G AGQ Y AN+ ++ + RR GLP
Sbjct: 265 ------LNLHELTPDLPLDFFVLFSSVAALLGGAGQAAYAAANAFLDALAAQRRRRGLPA 318
Query: 953 LAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLI---QSEPIVASM 1007
+V+WGA G+ A A + G + LE L E L+ + +VAS+
Sbjct: 319 TSVQWGAWAGGGMAAAAALRAR-LARSGLGPLAPAEALEAL-EALLASDAPQAVVASV 374
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375 |
| >gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Score = 179 bits (457), Expect = 7e-50
Identities = 77/259 (29%), Positives = 125/259 (48%), Gaps = 31/259 (11%)
Query: 508 GKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGE 567
G RV L +G A +P+ +L +AA +P V+ TA +F G ++ GE
Sbjct: 82 GDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGE 141
Query: 568 SILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRK---TFPFIKEENIGNSRDT 624
++LIH G+ GVG AAI LA+ + A + T G+ EK E R N R
Sbjct: 142 TVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVAI-------NYRTE 194
Query: 625 SFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIG-------KFDLANNNM 677
F + V + T GRGVD++L+ + + L ++R LA GR + IG + DLA
Sbjct: 195 DFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLGGAKAELDLA---- 250
Query: 678 LGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQK----AIDAGAVQPLVRTIFPEDK 733
+ + + G L + E K +L A ++ +G ++P++ +FP ++
Sbjct: 251 ---PLLRKRLTLTGSTLRS---RSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEE 304
Query: 734 VEEAFRYMAAGKHIGKVII 752
EA R M + +HIGK+++
Sbjct: 305 AAEAHRRMESNEHIGKIVL 323
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|219957 pfam08659, KR, KR domain | Back alignment and domain information |
|---|
Score = 173 bits (441), Expect = 2e-49
Identities = 70/182 (38%), Positives = 99/182 (54%), Gaps = 3/182 (1%)
Query: 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDD 842
+Y++ GGLGG GLELA WL RGAR LVL SRSG + + ++ +V + D
Sbjct: 2 TYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACD 61
Query: 843 ITTEAGVVNLLTEANK-LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDK 901
++ V LL E P+ G+ + A VL+DAL N T EDF L PK +
Sbjct: 62 VSDRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMTAEDFARVLAPKVTGAWNLHE 121
Query: 902 YSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGAVG 961
+R P L FV+FSS++ G+ GQ NY AN+ ++ + RRA+GLP ++ WG
Sbjct: 122 ATR-DRP-LDFFVLFSSIAGVLGSPGQANYAAANAFLDALAHYRRAQGLPATSINWGPWA 179
Query: 962 EV 963
+V
Sbjct: 180 DV 181
|
This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 171 bits (436), Expect = 4e-49
Identities = 66/170 (38%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTD 841
+ +I GG GG GL LA WL GAR LVL SR G G L + ++ +V ++
Sbjct: 1 GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAEL-VAELEALGAEVTVAAC 59
Query: 842 DITTEAGVVNLLTEANK-LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFD 900
D+ + LL LGP+DG+ + A VL D E TPE F L PK
Sbjct: 60 DVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLH 119
Query: 901 KYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGL 950
+ +R + LG FV+FSSV+ G+ GQ NY AN+ ++ + E RRAEGL
Sbjct: 120 ELTRDL--DLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEGL 167
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 169 bits (431), Expect = 2e-46
Identities = 85/318 (26%), Positives = 138/318 (43%), Gaps = 53/318 (16%)
Query: 462 QIYYSSINFRDIMLTTAKLAPEVIESRRLYQHC-----VIGFEYSGRLRDSGK------- 509
++ + +NF D+++ K YQ V G E +G + G+
Sbjct: 33 RVEAAGVNFPDLLMIQGK-----------YQVKPPLPFVPGSEVAGVVEAVGEGVTGFKV 81
Query: 510 --RVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGE 567
RV+ LT A + +PD + E+AA +P Y TA +A+ ++Q GE
Sbjct: 82 GDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGE 141
Query: 568 SILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIG-----NSR 622
++L+ +GGVG AA+ LA+ + A + + EK R +G + R
Sbjct: 142 TVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARA---------LGADHVIDYR 192
Query: 623 DTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIG-------KFDLANN 675
D + V T GRGVD+V + + + +AS+R LA GGR L IG +
Sbjct: 193 DPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASGEIPQIPA--- 249
Query: 676 NMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVE 735
N+L ++ S GV + E E + L + G ++P V +FP ++
Sbjct: 250 NLL----LLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAA 305
Query: 736 EAFRYMAAGKHIGKVIIK 753
EA R +A K GKV++
Sbjct: 306 EALRALADRKATGKVVLT 323
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase | Back alignment and domain information |
|---|
Score = 167 bits (424), Expect = 9e-46
Identities = 87/270 (32%), Positives = 137/270 (50%), Gaps = 22/270 (8%)
Query: 497 GFEYSGRLRDSGKRVMGLTSG--------------RSLANCCETDVEMAWEIPDQWTLED 542
GFE SG +R G V L G +L E V P + E+
Sbjct: 42 GFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVTVPEDQVVRK---PASLSFEE 98
Query: 543 AATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEK 602
A +P V+ T + A F + KGE ILI +GG G A+ LAR AEI+ T + +K
Sbjct: 99 ACALPVVFLTVIDA-FARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDK 157
Query: 603 REFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGG 662
E++++ + ++ N + FE+ +M+ T GRGVD+V+N+L+ E +Q + CLA GG
Sbjct: 158 LEYLKQ----LGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGG 213
Query: 663 RFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQ 722
R++EI L + + + V SFH V L + E+ Q + ++ G ++
Sbjct: 214 RYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELR 273
Query: 723 PLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752
P V IFP D + EA+RY++ ++IGKV++
Sbjct: 274 PTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303 |
| >gnl|CDD|187658 cd08955, KR_2_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 2, complex (x) | Back alignment and domain information |
|---|
Score = 152 bits (387), Expect = 5e-40
Identities = 69/195 (35%), Positives = 101/195 (51%), Gaps = 4/195 (2%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ +Y+I GGLGG GL +A+WLV RGAR LVLT R + I + +V++
Sbjct: 148 PDATYLITGGLGGLGLLVAEWLVERGARHLVLTGRRAPSAAARQ-AIAALEEAGAEVVVL 206
Query: 840 TDDITTEAGVVNLLTEANK-LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D++ + L + L P+ G+ + A VL D + NQ E F L PK
Sbjct: 207 AADVSDRDALAAALAQIRASLPPLRGVIHAAGVLDDGVLANQDWERFRKVLAPKVQGAWN 266
Query: 899 FDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWG 958
+ ++ P L FV+FSSV+ G+ GQ NY AN+ ++ + RRA GLP L++ WG
Sbjct: 267 LHQLTQD-LP-LDFFVLFSSVASLLGSPGQANYAAANAFLDALAHYRRARGLPALSINWG 324
Query: 959 AVGEVGLVADMAEDN 973
EVG+ A +A
Sbjct: 325 PWAEVGMAASLARQA 339
|
Ketoreductase, a module of the multidomain polyketide synthase, has 2 subdomains, each corresponding to a short-chain dehydrogenases/reductase (SDR) family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerizes but is composed of 2 subdomains, each resembling an SDR monomer. In some instances, as in porcine FAS, an enoyl reductase (a Rossman fold NAD binding domain of the MDR family) module is inserted between the sub-domains. The active site resembles that of typical SDRs, except that the usual positions of the catalytic asparagine and tyrosine are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular polyketide synthases are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) fatty acid synthase. In some instances, such as porcine FAS , an enoyl reductase module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-ketoacyl reductase (KR), forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-enoyl reductase (ER). Polyketide syntheses also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes the KR domain of the Lyngbya majuscule Jam J, -K, and #L which are encoded on the jam gene cluster and are involved in the synthesis of the Jamaicamides (neurotoxins); Lyngbya majuscule Jam P belongs to a different KR_FAS_SDR_x subfamily. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 376 |
| >gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Score = 150 bits (382), Expect = 6e-40
Identities = 72/307 (23%), Positives = 129/307 (42%), Gaps = 33/307 (10%)
Query: 465 YSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDS---------GKRVMGLT 515
+ +N D+++ P + G E +G + G RV L
Sbjct: 36 AAGVNPIDVLVRQGLAPPVRPLPF------IPGSEAAGVVVAVGSGVTGFKVGDRVAALG 89
Query: 516 SGR---SLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIH 572
A + +PD + E+AA +P TA A+F ++ GE++L+H
Sbjct: 90 GVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVH 149
Query: 573 AGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMK 632
+GGVG AAI LA+ + A + V + EK E +++ + N R+ F + V +
Sbjct: 150 GAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADH----VINYREEDFVEQVRE 205
Query: 633 RTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIG----KFDLANNNMLGMEVFMRETS 688
T G+GVD+VL+++ + AS+ LA GGR + IG + N + + +
Sbjct: 206 LTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRG 265
Query: 689 FHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFP-EDKVEEAFRYMAAGKHI 747
D AE L + +G ++P++ ++P + A + +
Sbjct: 266 VTLGSRDPEALAEAL------AELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTT 319
Query: 748 GKVIIKI 754
GKV++K+
Sbjct: 320 GKVVLKV 326
|
Length = 326 |
| >gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 1e-39
Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 37/233 (15%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
IPD + E+AA P + TA + + +++ GE++L+H GVG AAI +A+ A +
Sbjct: 135 IPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATV 194
Query: 594 FTTVGTPEKREFIRKTFPFIKEENIG-----NSRDTSFEQLVMKRTKGRGVDLVLNSLAE 648
T G+ +K E + + +G + R F + V + T RGVD+V+ +
Sbjct: 195 IATAGSEDKLE---------RAKELGADYVIDYRKEDFVREVRELTGKRGVDVVVEHVGA 245
Query: 649 EKLQASVRCLAQGGRFLEIG-------KFDLANNNMLGMEVFMRETSFHGVMLDNFFFAE 701
+ S++ LA+GGR + G DL VF R+ S G + AE
Sbjct: 246 ATWEKSLKSLARGGRLVTCGATTGYEAPIDL-------RHVFWRQLSILGSTMGT--KAE 296
Query: 702 QEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754
L +AL+ + G ++P++ ++FP ++ EA R + + + GK+++
Sbjct: 297 ------LDEALRL-VFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342 |
| >gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Score = 148 bits (377), Expect = 3e-39
Identities = 74/285 (25%), Positives = 130/285 (45%), Gaps = 44/285 (15%)
Query: 495 VIGFEYSGRLRD---------SGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAAT 545
++G E +G + G RV L +G A +P+ +L +AA
Sbjct: 60 ILGLEVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAA 119
Query: 546 VPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREF 605
+P + T +F G ++ GE++LIH G+ G+G AI LA+ A +FTT G+ EK
Sbjct: 120 LPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAA 179
Query: 606 IRKTFPFIKEENIG-----NSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQ 660
+G N R+ F ++V T G+GVD++L+ + L +++ LA
Sbjct: 180 CEA---------LGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALAL 230
Query: 661 GGRFLEIG-------KFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQ 713
GR ++IG + DL + + + G L AE K ++ L+
Sbjct: 231 DGRIVQIGFQGGRKAELDLG-------PLLAKRLTITGSTLRARPVAE---KAAIAAELR 280
Query: 714 KA----IDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754
+ + +G V+P++ +FP + +A M +G HIGK+++ +
Sbjct: 281 EHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325 |
| >gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 136 bits (346), Expect = 5e-35
Identities = 88/321 (27%), Positives = 141/321 (43%), Gaps = 55/321 (17%)
Query: 467 SINFRDIMLTTAKLAPEVIESRR-LYQ-----HCVIGFEYSGRLRDSGK---------RV 511
+NF D+M +R+ LY V GFE +G + G+ RV
Sbjct: 37 GLNFADLM------------ARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRV 84
Query: 512 MGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILI 571
MGLT A + + +PD + E+AA P Y TA YA+F G ++ G+S+L+
Sbjct: 85 MGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLV 144
Query: 572 HAGSGGVGQAAINLARYMDAEIFTTVGT--PEKREFIRKTFPFIKEENIGNSRDTSFEQL 629
H+ +GGVG AA L + T VGT K E +KE + + D +
Sbjct: 145 HSAAGGVGLAAGQLCK--TVPNVTVVGTASASKHE-------ALKENGVTHVIDYRTQDY 195
Query: 630 V--MKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGM----EVF 683
V +K+ GVD+VL++L E + S L GR + G +L + +
Sbjct: 196 VEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKW 255
Query: 684 MRETSFHGVML--DN---------FFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPED 732
+ L +N + F E+E + L K + G ++P + ++FP +
Sbjct: 256 WNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVFPFE 315
Query: 733 KVEEAFRYMAAGKHIGKVIIK 753
+V EA R + + K+IGKV++
Sbjct: 316 EVGEAMRRLQSRKNIGKVVLT 336
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 9e-32
Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 33/233 (14%)
Query: 535 PDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIF 594
P ++ +AA +P V TA + +Q G+++LIH G+GGVG A+ LA+ A ++
Sbjct: 114 PANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVY 173
Query: 595 TTVGTPEKREFIRKTFPFIKEENIG----NSRDTSFEQLVMKRTKGRGVDLVLNSLAEEK 650
T + EK F R +G + + V + T GRG D+V +++ E
Sbjct: 174 ATASS-EKAAFARS---------LGADPIIYYRETVVEYVAEHTGGRGFDVVFDTVGGET 223
Query: 651 LQASVRCLAQGGRF---LEIGKFDLANNNMLGMEVFMRETSFHGV-----MLDNFFFAEQ 702
L AS +A GR L DLA + R ++ GV +L A
Sbjct: 224 LDASFEAVALYGRVVSILGGATHDLA-------PLSFRNATYSGVFTLLPLLTGEGRAHH 276
Query: 703 EWKMSLQKALQKAIDAGAVQPLV-RTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754
+ + + ++ G ++PL+ FP ++ A + +G GK++I +
Sbjct: 277 GEIL---REAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326 |
| >gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 3e-30
Identities = 54/265 (20%), Positives = 101/265 (38%), Gaps = 51/265 (19%)
Query: 465 YSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDS---------GKRVMGLT 515
+ + D+ + P ++G E +G + + G RV+ L
Sbjct: 8 AAGLCGTDLHIRRGGYPP------PPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLP 61
Query: 516 --SGRSLANCCET---------------------DVEMAWEIPDQWTLEDAATVPCVYAT 552
+ C E + +PD +LE+AA +P AT
Sbjct: 62 NLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLAT 121
Query: 553 AVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRK---T 609
A +A+ G ++ G+++L+ G+GGVG A LA+ A + T + EK E ++
Sbjct: 122 AYHALRRAGVLKPGDTVLVL-GAGGVGLLAAQLAKAAGARVIVTDRSDEKLELAKELGAD 180
Query: 610 FPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSL-AEEKLQASVRCLAQGGRFLEIG 668
+ ++ E+ + T G G D+V++++ E L ++R L GGR + +G
Sbjct: 181 HVI-------DYKEEDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVG 232
Query: 669 KFDLANNNMLGMEVFMRETSFHGVM 693
+ +E + G
Sbjct: 233 GTSGGPPLDDLRRLLFKELTIIGST 257
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271 |
| >gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Score = 121 bits (307), Expect = 5e-30
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 16/230 (6%)
Query: 529 EMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARY 588
+ +PD + E A + TA A+F + GE++L+H GSG VG AA+ LAR+
Sbjct: 108 DQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARW 167
Query: 589 MDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE 648
A + T + E E +R+ + + N R ++ T G+GVD+++ LA
Sbjct: 168 AGARVIATASSAEGAELVRQ----AGADAVFNYRAEDLADRILAATAGQGVDVIIEVLAN 223
Query: 649 EKLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVF---MRETSFHGVMLDNFFFAEQEW 704
L + LA GGR + G + + G + + +E S GV+L + A E
Sbjct: 224 VNLAKDLDVLAPGGRIVVYG-----SGGLRGTIPINPLMAKEASIRGVLL---YTATPEE 275
Query: 705 KMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754
+ + +A+ + GA++P++ +P ++ A + +G IGKV++
Sbjct: 276 RAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 1e-29
Identities = 66/190 (34%), Positives = 96/190 (50%), Gaps = 7/190 (3%)
Query: 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGV--KNGYQALRIKIWKSYDVQVLISTD 841
Y++ GG GG G LA L R +LVL RS + + ++A + ++ +VL +
Sbjct: 208 YLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISA 267
Query: 842 DITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFD 900
D+T A V LL + + G +DG+ + A VL+DAL +T EDF A L PK +
Sbjct: 268 DVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAEDFEAVLAPKVDGLLNLA 327
Query: 901 KYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPG--LAVEWG 958
+ L FV+FSSVS G AGQ +Y AN+ ++ R G G L++ W
Sbjct: 328 QALADE--PLDFFVLFSSVSAFFGGAGQADYAAANAFLDAFAAYLRQRGPQGRVLSINWP 385
Query: 959 AVGEVGLVAD 968
A E G+ AD
Sbjct: 386 AWREGGMAAD 395
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436 |
| >gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 5e-29
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 31/230 (13%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
PD + E+AAT+PC TA A+F G ++ G+++L+ G+GGV A+ A+ A +
Sbjct: 129 APDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQ-GTGGVSLFALQFAKAAGARV 187
Query: 594 FTTVGTPEKREFIRKTFPFIKEENIG-----NSRDTS-FEQLVMKRTKGRGVDLVLNSLA 647
T + EK E + +G N R T + + V+K T GRGVD V+
Sbjct: 188 IATSSSDEKLERAKA---------LGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGG 238
Query: 648 EEKLQASVRCLAQGGRFLEIG---KFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEW 704
L S++ +A GG IG F+ + + + + G+ + +
Sbjct: 239 PGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLP---LLTKGATLRGIAVGS-------- 287
Query: 705 KMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754
+ +A+ +AI+A ++P++ +FP ++ +EA+RY+ +G H GKV+I++
Sbjct: 288 -RAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336 |
| >gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 1e-27
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 19/227 (8%)
Query: 535 PDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIF 594
PD + +AA + Y TA A+ ++ G+S+LI A S VG AAI +A A +
Sbjct: 114 PDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVI 173
Query: 595 TTVGTPEKREFIR----KTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEK 650
T T EKR+ + EE++ V++ T G+GVD+V + + +
Sbjct: 174 ATTRTSEKRDALLALGAAHVIVTDEEDLVAE--------VLRITGGKGVDVVFDPVGGPQ 225
Query: 651 LQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQK 710
LA GG + G + +F G LD + ++
Sbjct: 226 FAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEA----RRR 281
Query: 711 ALQKAIDA---GAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754
A+ +D GA++P+V +FP D + EA RY+ +G+ IGK+++
Sbjct: 282 AIAFILDGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328 |
| >gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 6e-27
Identities = 79/289 (27%), Positives = 128/289 (44%), Gaps = 38/289 (13%)
Query: 495 VIGFEYSGRLRDS---------GKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAAT 545
++G E +G + D G RVM L G A IP +T E+AA
Sbjct: 61 ILGLEVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAA 120
Query: 546 VPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREF 605
+P + TA + G ++KG+S+LIHAG+ GVG AA LA A T + EK +F
Sbjct: 121 IPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDF 180
Query: 606 IRKTFPFIKEENIGNSRD-TSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRF 664
+K + + D F V K T +GV+LVL+ + L + LA G++
Sbjct: 181 CKK----LAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKW 236
Query: 665 LEIG--------KFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAI 716
+ G KF+L + + S L + E+K L + ++ +
Sbjct: 237 IVYGFMGGAKVEKFNLL-------PLLRKRASIIFSTLRS---RSDEYKADLVASFEREV 286
Query: 717 ----DAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTK 761
+ G ++P+V +P ++V EA ++ K+IGKV++ + EP
Sbjct: 287 LPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTV--NEPLS 333
|
Length = 334 |
| >gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 6e-27
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 28/222 (12%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
P + E+AA +P TA A+F G ++ G+++LIH +GGVG A+ LA+ A +
Sbjct: 113 KPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARV 172
Query: 594 FTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQA 653
T +F+R +E I + FE + GVD VL+++ E L
Sbjct: 173 IATAS-AANADFLRS---LGADEVI-DYTKGDFE----RAAAPGGVDAVLDTVGGETLAR 223
Query: 654 SVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQ 713
S+ + GGR + I G + GV F F E + L
Sbjct: 224 SLALVKPGGRLVSI----------AGPPPAEQAAKRRGV-RAGFVFVE-----PDGEQLA 267
Query: 714 ---KAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752
+ ++AG ++P+V +FP + EA + +G GKV++
Sbjct: 268 ELAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL 309
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309 |
| >gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 9e-27
Identities = 63/314 (20%), Positives = 130/314 (41%), Gaps = 49/314 (15%)
Query: 462 QIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDSGK---------RVM 512
+++ +S+N D L + + G +++G + G V
Sbjct: 32 KVHAASVNPVDWKLRRGPPKLLLGRPF----PPIPGMDFAGEVVAVGSGVTRFKVGDEVF 87
Query: 513 GLTSGR---SLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESI 569
G + +LA + P+ + E+AA +P TA+ A+ G+++ G+ +
Sbjct: 88 GRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRV 147
Query: 570 LIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSR--DTSFE 627
LI+ SGGVG A+ +A+ + A + T V + E +R ++G D + E
Sbjct: 148 LINGASGGVGTFAVQIAKALGAHV-TGVCSTRNAELVR---------SLGADEVIDYTTE 197
Query: 628 QLVMKRTKGRGVDLVLNSLAEEK--LQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMR 685
V G D++ +++ L + L GGR++ +G + L + + +
Sbjct: 198 DFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVG----GGPSGLLLVLLLL 253
Query: 686 ETSFHGVMLDNFFFAEQEWKMSLQKA-------LQKAIDAGAVQPLVRTIFPEDKVEEAF 738
+ + K L K L + ++ G ++P++ +++P + EA+
Sbjct: 254 PLT--------LGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAY 305
Query: 739 RYMAAGKHIGKVII 752
R + +G+ GKV+I
Sbjct: 306 RRLKSGRARGKVVI 319
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 2e-25
Identities = 68/257 (26%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 508 GKRVM---GLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQ 564
G RV L G S A D +PD + E+AA +PC TA A+F +++
Sbjct: 81 GDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIE 140
Query: 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRK---TFPFIKEENIGNS 621
G +ILI G+GGVG A+ LA+ + TT + E+++ +
Sbjct: 141 AGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVKSLGADHVI-------DY 192
Query: 622 RDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGME 681
D + + + T GRGVD VL+++ E A LA G + I +
Sbjct: 193 NDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCI----QGRPDASPDP 248
Query: 682 VFMRETSFHGVMLDNFFFAEQEWKMSLQK----ALQKAIDAGAVQPLVRTIFPEDKVEEA 737
F R S H V L + L + + AG ++PLV + P +++ EA
Sbjct: 249 PFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEA 308
Query: 738 FRYMAAGKHIGKVIIKI 754
R + GK+++ I
Sbjct: 309 LRALKDRHTRGKIVVTI 325
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325 |
| >gnl|CDD|187655 cd08952, KR_1_SDR_x, ketoreductase (KR), subgroup 1, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 104 bits (263), Expect = 2e-23
Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 4/190 (2%)
Query: 786 ICGGLGGFGLELADWLVLRGARKLVLTSRSGVKN-GYQALRIKIWKSYDVQVLISTDDIT 844
+ GG G G +A WL RGA LVLTSR G G L + +V ++ D+
Sbjct: 235 VTGGTGALGAHVARWLARRGAEHLVLTSRRGPDAPGAAELV-AELTALGARVTVAACDVA 293
Query: 845 TEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSR 904
+ LL P+ + + A VL D ++ TPE L K ++ D+ +R
Sbjct: 294 DRDALAALLAALPAGHPLTAVVHAAGVLDDGPLDDLTPERLAEVLRAKVAGARHLDELTR 353
Query: 905 TMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGAVGEVG 964
L FV+FSS++ G+ GQ Y AN+ ++ + E RRA GLP +V WG G
Sbjct: 354 D--RDLDAFVLFSSIAGVWGSGGQGAYAAANAYLDALAERRRARGLPATSVAWGPWAGGG 411
Query: 965 LVADMAEDNL 974
+ A A + L
Sbjct: 412 MAAGAAAERL 421
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes KR domains found in many multidomain PKSs, including six of seven Sorangium cellulosum PKSs (encoded by spiDEFGHIJ) which participate in the synthesis of the polyketide scaffold of the cytotoxic spiroketal polyketide spirangien. These seven PKSs have either a single PKS module (SpiF), two PKR modules (SpiD,-E,-I,-J), or three PKS modules (SpiG,-H). This subfamily includes the single KR domain of SpiF, the first KR domains of SpiE,-G,H,-I,and #J, the third KR domain of SpiG, and the second KR domain of SpiH. The second KR domains of SpiE,-G, I, and #J, and the KR domains of SpiD, belong to a different KR_FAS_SDR subfamily. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 480 |
| >gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 97.4 bits (243), Expect = 1e-21
Identities = 58/222 (26%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 533 EIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE 592
++PD + E AA CV TAV+A+ G ++KG+++L+ GGVG AI LA+ + A
Sbjct: 131 KLPDNVSDESAALAACVVGTAVHALKRAG-VKKGDTVLVTGAGGGVGIHAIQLAKALGAR 189
Query: 593 IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQ 652
+ +PEK + +++ + I S F + V K G D+V+ + ++
Sbjct: 190 VIAVTRSPEKLKILKELG---ADYVIDGS---KFSEDVKKLG---GADVVIELVGSPTIE 240
Query: 653 ASVRCLAQGGRFLEIGKFDLANNNM-LGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKA 711
S+R L +GGR + IG + G+ + ++E G + K +++A
Sbjct: 241 ESLRSLNKGGRLVLIGNVTPDPAPLRPGL-LILKEIRIIGSISAT--------KADVEEA 291
Query: 712 LQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753
L K + G ++P++ + + + EA + +GK +G++++K
Sbjct: 292 L-KLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332 |
| >gnl|CDD|187659 cd08956, KR_3_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 3, complex (x) | Back alignment and domain information |
|---|
Score = 98.5 bits (246), Expect = 2e-21
Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 5/175 (2%)
Query: 786 ICGGLGGFGLELADWLVLR-GARKLVLTSRSGV-KNGYQALRIKIWKSYDVQVLISTDDI 843
I GG G G LA LV G R L+L SR G G L ++ + +V ++ D+
Sbjct: 198 ITGGTGTLGALLARHLVTEHGVRHLLLVSRRGPDAPGAAELVAEL-AALGAEVTVAACDV 256
Query: 844 TTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYS 903
A + LL P+ + + A VL D + + TPE +A L PK +A + + +
Sbjct: 257 ADRAALAALLAAVPADHPLTAVVHAAGVLDDGVLTSLTPERLDAVLRPKVDAAWHLHELT 316
Query: 904 RTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWG 958
R + L FV+FSS + G+ GQ NY AN+ ++ + + RRA GLP ++ WG
Sbjct: 317 RDL--DLAAFVLFSSAAGVLGSPGQANYAAANAFLDALAQHRRARGLPATSLAWG 369
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta- ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes KR domains found in many multidomain PKSs, including six of seven Sorangium cellulosum PKSs (encoded by spiDEFGHIJ) which participate in the synthesis of the polyketide scaffold of the cytotoxic spiroketal polyketide spirangien. These seven PKSs have either a single PKS module (SpiF), two PKR modules (SpiD,-E,-I,-J), or three PKS modules (SpiG,-H). This subfamily includes the second KR domains of SpiE,-G, I, and -J, both KR domains of SpiD, and the third KR domain of SpiH. The single KR domain of SpiF, the first and second KR domains of SpiH, the first KR domains of SpiE,-G,- I, and -J, and the third KR domain of SpiG, belong to a different KR_FAS_SDR subfamily. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 448 |
| >gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 94.8 bits (237), Expect = 8e-21
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
+PD + E AA + TA Y + ++ G+++L+HA +GGVG A+ + A +
Sbjct: 105 LPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATV 164
Query: 594 FTTVGTPEKREFIRKTFPFIKEENIG-----NSRDTSFEQLVMKRTKGRGVDLVLNSLAE 648
TV + EK E R G N RD F + V + T GRGVD+V + + +
Sbjct: 165 IGTVSSEEKAELARA---------AGADHVINYRDEDFVERVREITGGRGVDVVYDGVGK 215
Query: 649 EKLQASVRCLAQGGRFLEIGK-------FDLANNNMLGME--VFMRETSFHGVMLDNFFF 699
+ + S+ L G + G FDL L R + FH +
Sbjct: 216 DTFEGSLDSLRPRGTLVSFGNASGPVPPFDL---LRLSKGSLFLTRPSLFH-------YI 265
Query: 700 AEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754
A +E ++ L A+ +G ++ + +P +A R + + K GK+++
Sbjct: 266 ATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTGKLLLIP 320
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320 |
| >gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 88.1 bits (219), Expect = 1e-18
Identities = 70/324 (21%), Positives = 121/324 (37%), Gaps = 57/324 (17%)
Query: 462 QIYYSSINFRDIMLTT-----AKLAPEVIESRRLYQHCVIGFEYSGRLR---------DS 507
++ S ++F D+ + P G++ GR+ +
Sbjct: 33 KVEASGVSFADVQMRRGLYPDQPPLPFTP-----------GYDLVGRVDALGSGVTGFEV 81
Query: 508 GKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGE 567
G RV LT A D + +P+ +A + Y TA + ++ G+
Sbjct: 82 GDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQ 141
Query: 568 SILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNS---RDT 624
+LIH SGGVGQA + LA AE++ T E+ ++E +G + T
Sbjct: 142 RVLIHGASGGVGQALLELALLAGAEVYGT--ASERN------HAALRE--LGATPIDYRT 191
Query: 625 SFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGK--------------- 669
M GVD+V + + E + S LA GG + G
Sbjct: 192 KDWLPAMLT--PGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALG 249
Query: 670 FDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIF 729
LA L + R +F+ V + + ++ L L + G ++P +
Sbjct: 250 SLLARLAKLKLLPTGRRATFYYVW-RDRAEDPKLFRQDL-TELLDLLAKGKIRPKIAKRL 307
Query: 730 PEDKVEEAFRYMAAGKHIGKVIIK 753
P +V EA R + +GK +GK+++
Sbjct: 308 PLSEVAEAHRLLESGKVVGKIVLL 331
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331 |
| >gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like | Back alignment and domain information |
|---|
Score = 86.1 bits (214), Expect = 8e-18
Identities = 61/278 (21%), Positives = 109/278 (39%), Gaps = 48/278 (17%)
Query: 508 GKRVMGLTSGRSLANCCE--------TDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFI 559
G RV G G + + D ++ +IPD + E+AAT+P TA A+F
Sbjct: 79 GDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQ 138
Query: 560 CGQM----------QKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKT 609
+ KG+ +LI GS VG AI LA+ ++ TT K
Sbjct: 139 KLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTASP--------KN 190
Query: 610 FPFIKEENIG-----NSRDTSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGR 663
F +K +G + D + + T G+ + L+ ++ E Q L + G
Sbjct: 191 FDLVKS--LGADAVFDYHDPDVVEDIRAATGGK-LRYALDCISTPESAQLCAEALGRSGG 247
Query: 664 FLEIGKFDLANNNMLGMEVFMRET-SFHGVM---LDNFFFAEQEWKMSLQKALQKAIDAG 719
GK L + + E R+ V+ + ++E+ K L + ++ G
Sbjct: 248 ----GK--LVSLLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEG 301
Query: 720 AVQPLVRTIFPE--DKVEEAFRYMAAGKHIG-KVIIKI 754
++P + + V+E + GK G K+++++
Sbjct: 302 KLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339 |
| >gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 5e-16
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 577 GVGQAAINLARYM-DAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTK 635
GVG AA+ LA+ + A + + EK E ++ + +++ N RD F + V + T
Sbjct: 1 GVGLAAVQLAKALGAARVIAVDRSEEKLELAKE----LGADHVINYRDEDFVERVRELTG 56
Query: 636 GRGVDLVLNSL-AEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVML 694
GRGVD+V++ + A L+ ++ L GGR + +G A ++ ++E + G +
Sbjct: 57 GRGVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILGSLG 116
|
Length = 131 |
| >gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Score = 78.8 bits (195), Expect = 2e-15
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 36/212 (16%)
Query: 561 GQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFI------- 613
G+M+ GE++L+ A +GG GQ A+ LA+ + T + EK EF++ +
Sbjct: 135 GEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS----LGCDRPIN 190
Query: 614 -KEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIG---- 668
K E++G V+K+ +GVD+V S+ E V LA GR + IG
Sbjct: 191 YKTEDLGE---------VLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISG 241
Query: 669 -----KFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP 723
L ++ + S G L ++ + L + LQ G +
Sbjct: 242 YQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYA---KLIPQHLDRLLQ-LYQRGKLVC 297
Query: 724 LV-RTIFPE-DKVEEAFRYMAAGKHIGKVIIK 753
V T F + V +A Y+ +GK+IGKV+++
Sbjct: 298 EVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 4e-15
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Query: 620 NSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLG 679
+ FE+ T G GVD+VL+++ E L ++ L GGR + IG + +L
Sbjct: 8 DYTTEDFEEA----TAGEGVDVVLDTVGGETLLRALLALKPGGRLVSIG----GPDLLLS 59
Query: 680 MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFR 739
+ GV L F + E L + + ++AG ++P++ +FP ++ EA R
Sbjct: 60 VAAKAGGRGVRGVFL--FPVSPGEAGADLAELAE-LVEAGKLRPVIDRVFPLEEAAEAHR 116
Query: 740 YMAAGKHIGKVII 752
Y+ +G+ GKV++
Sbjct: 117 YLESGRARGKVVL 129
|
Length = 129 |
| >gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Score = 78.0 bits (193), Expect = 4e-15
Identities = 51/229 (22%), Positives = 105/229 (45%), Gaps = 27/229 (11%)
Query: 531 AWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMD 590
+IP+ L +AA + C T A+ ++ G+ + + G+GG+G A+ A+ M
Sbjct: 133 VVKIPEGLDLAEAAPLLCAGITTYRALKKAN-VKPGKWVAVV-GAGGLGHMAVQYAKAMG 190
Query: 591 AEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEK 650
AE+ + EK E +K + +++ NS D+ + V + D +++++
Sbjct: 191 AEVIAITRSEEKLELAKK----LGADHVINSSDSDALEAVKEI-----ADAIIDTVGPAT 241
Query: 651 LQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFFAEQEWKMSLQ 709
L+ S++ L +GG + +G +L + ++E S G ++ +
Sbjct: 242 LEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT------------R 289
Query: 710 KALQKAID---AGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIR 755
L++A+D G ++P + P D++ EA+ M GK G+ +I +
Sbjct: 290 ADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS 338
|
Length = 339 |
| >gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase | Back alignment and domain information |
|---|
Score = 77.8 bits (192), Expect = 4e-15
Identities = 59/247 (23%), Positives = 102/247 (41%), Gaps = 10/247 (4%)
Query: 508 GKRVMGLTSGRS--LANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQK 565
G+RV+ T A DV+ +PD LE A V TA+ + +
Sbjct: 84 GRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTP 142
Query: 566 GESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTS 625
G+ +L+ A +GG+G + LA+ A + G P K +R + + +
Sbjct: 143 GDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRA----LGADVAVDYTRPD 198
Query: 626 FEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMR 685
+ V + G GV +VL+ + +A++ LA GGRFL G + + R
Sbjct: 199 WPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYGWASGEWTALDEDDARRR 258
Query: 686 ETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGK 745
+ G++ + +AL +A G + P+V FP ++ EA + A
Sbjct: 259 GVTVVGLLGVQAE--RGGLRALEARALAEAAA-GRLVPVVGQTFPLERAAEAHAALEARS 315
Query: 746 HIGKVII 752
+GKV++
Sbjct: 316 TVGKVLL 322
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Score = 75.4 bits (186), Expect = 4e-14
Identities = 50/224 (22%), Positives = 92/224 (41%), Gaps = 20/224 (8%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
IPD EDA + + T + ++ G ++ + G+G VG A+ AR + A
Sbjct: 137 IPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAV-IGAGPVGLCAVAGARLLGAAR 194
Query: 594 FTTVG-TPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLA-EEKL 651
V PE+ + ++ I N ++ + +++ T GRGVD V+ ++ EE
Sbjct: 195 IIAVDSNPERLDLAKEAGATD----IINPKNGDIVEQILELTGGRGVDCVIEAVGFEETF 250
Query: 652 QASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKA 711
+ +V+ + GG +G + + L E F + +F ++
Sbjct: 251 EQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMP---------E 301
Query: 712 LQKAIDAGAV--QPLVRTIFPEDKVEEAFRYMAAGK-HIGKVII 752
L I+ G + L+ FP D + +A+R KV+I
Sbjct: 302 LLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVI 345
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347 |
| >gnl|CDD|216224 pfam00975, Thioesterase, Thioesterase domain | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 4e-14
Identities = 39/226 (17%), Positives = 69/226 (30%), Gaps = 33/226 (14%)
Query: 1159 TIFMVPGIEGIATVLEPLAKNINAQVLV-------FQFDHTNPPDTIPEMADSLLPHFKK 1211
+F P G A+ LA+ + + P +I E+A+ ++
Sbjct: 2 RLFCFPPAGGSASYFRNLARRLPGTAEFNAVQLPGRERGE-PPLTSIEELAEEYAEALRR 60
Query: 1212 RLVHGTDEIKLVGFSFGGMVALELAIKLEQLG-TKCHLYLVDSAPDYVLTSLRKLPDWNA 1270
G L G S GG++A E+A +LE+ G L L D+ + R+
Sbjct: 61 IQPEG--PYALFGHSMGGLLAFEVARRLERRGEEPAGLILSDAYAPH---FGRREASHLL 115
Query: 1271 KLNYFLDLMPEDATHSRTYQRNLAH-----------AAYKRITSILKYTDPKHKAFGGNI 1319
+ L + T + L A R + Y A +
Sbjct: 116 GDDELLAELRRIG---GTPEALLEDEELLSLLLPALRADYRA--LENYPIHP-IAAPSDA 169
Query: 1320 TLL--RPTEQALPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKS 1363
TL + H + G+HF + ++ +
Sbjct: 170 TLFYGADDPLNTLDWLAAWWREYTPGEFDTHVLPGDHFYLNEHAEE 215
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. Length = 224 |
| >gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Score = 73.9 bits (182), Expect = 8e-14
Identities = 59/285 (20%), Positives = 104/285 (36%), Gaps = 48/285 (16%)
Query: 495 VIGFEYSGRLRDSGKRVMGLTSG------------RSLANCCETDVEMAWEIPDQWTLED 542
V G E G + + G V GL G + D+ +PD + E
Sbjct: 59 VPGNEGVGVVVEVGSGVSGLLVGQRVLPLGGEGTWQEYVVAPADDL---IPVPDSISDEQ 115
Query: 543 AATVPCVYATAVYAMFICGQ---MQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599
AA + Y + A + + + G+ ++ +A + VG+ I LA+ + F T+
Sbjct: 116 AAML---YINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLG---FKTINV 169
Query: 600 PEKREFIRKTFPFIKE----ENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASV 655
+ E + + +K E I +S Q V + T G G L L+++ E
Sbjct: 170 VRRDEQVEE----LKALGADEVI-DSSPEDLAQRVKEATGGAGARLALDAVGGESATRLA 224
Query: 656 RCLAQGGRFLEIGKFDLANNNMLG--MEVFMRETSFHGVMLDNFFFAEQEWKMSLQK--- 710
R L GG + G + G + F + + F+ + + +
Sbjct: 225 RSLRPGGTLVNYG-------LLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQE 277
Query: 711 ---ALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752
+ K ++AG + V FP + EEA GKV++
Sbjct: 278 TFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLL 322
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323 |
| >gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Score = 74.2 bits (183), Expect = 9e-14
Identities = 59/238 (24%), Positives = 112/238 (47%), Gaps = 34/238 (14%)
Query: 535 PDQWTLEDAATVPCVYATAVYAMFICGQMQ----KGESILIHAGSGGVGQAAINLARYMD 590
P + E+AA++P TA A+ G + G+ +LI GSGGVG AI L +
Sbjct: 128 PKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWG 187
Query: 591 AEIFTTVGTPEKREFIRKTFPFIKE---ENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLA 647
A + TT T P +K +++ + + FE+ + +R K D++L+++
Sbjct: 188 AHVTTTCST--------DAIPLVKSLGADDVIDYNNEDFEEELTERGK---FDVILDTVG 236
Query: 648 EEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVF------------MRETSFHGVMLD 695
+ + +++ L +GG ++ + L N + LG+ V ++ G
Sbjct: 237 GDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGL-VGGMLKSAVDLLKKNVKSLLKGSHYR 295
Query: 696 NFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753
FF+ +L + L K ++ G ++P++ +FP ++V EA+ + +G GK +IK
Sbjct: 296 WGFFSPSG--SALDE-LAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350 |
| >gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 73.1 bits (180), Expect = 2e-13
Identities = 51/223 (22%), Positives = 102/223 (45%), Gaps = 23/223 (10%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
+P + E A VPCV + G ++KGE++L+ GGVG AI +A+ + A++
Sbjct: 132 VPPNVSDEGAVIVPCVTGMVYRGLRRAG-VKKGETVLVTGAGGGVGIHAIQVAKALGAKV 190
Query: 594 FTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQA 653
+ K + + K ++ + F + V K G D+V+ ++ L+
Sbjct: 191 IAVTSSESKAKIVSKYADYVIVGS-------KFSEEVKKIG---GADIVIETVGTPTLEE 240
Query: 654 SVRCLAQGGRFLEIGKFD--LANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKA 711
S+R L GG+ ++IG D + LG + +++ G + K +++A
Sbjct: 241 SLRSLNMGGKIIQIGNVDPSPTYSLRLGY-IILKDIEIIGHI--------SATKRDVEEA 291
Query: 712 LQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754
L K + G ++P++ ++++A + IGK+++K
Sbjct: 292 L-KLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333
|
Length = 334 |
| >gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 8e-13
Identities = 46/214 (21%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 552 TAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFP 611
TA + + GQ + GE++++ A +G VG +A+ + G EK +F+ +
Sbjct: 137 TAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELG 196
Query: 612 FIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFD 671
F + + + F Q +K +G+D+ ++ E L A + L R G
Sbjct: 197 F---DAGIDYKAEDFAQ-ALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAIS 252
Query: 672 LANNNMLGM------EVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLV 725
N L + + G ++ + + + + L + G +Q
Sbjct: 253 QYNAPELPPGPRRLPLLMAKRLRVQGFIVASDY---DQRFPEALRELGGWVKEGKIQYRE 309
Query: 726 RTIFPEDKVE---EAFRYMAAGKHIGKVIIKIRD 756
TI D +E EAF + +GK+ GK+++K+ D
Sbjct: 310 -TI--VDGLENAPEAFIGLLSGKNFGKLVVKVAD 340
|
Length = 340 |
| >gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 1e-12
Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 28/218 (12%)
Query: 544 ATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKR 603
A +P Y TA ++F +Q G+++LI G+ VG AA+ LA+ + A + T +PE+
Sbjct: 121 AALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERA 180
Query: 604 EFIRKT---FPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQ 660
+++ I + I EQL R G D VL + L+ S+R L
Sbjct: 181 ALLKELGADEVVIDDGAIA-------EQL---RAAPGGFDKVLELVGTATLKDSLRHLRP 230
Query: 661 GGRFLEIGKFDLANNNMLGMEVFMR-----ETSFHGVMLDNF-FFAEQEWKMSLQKALQK 714
GG G +LG + + + GV L + + LQ L
Sbjct: 231 GGIVCMTG--------LLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQ-ELFD 281
Query: 715 AIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752
+ AG + +F D++ EA YM + + GKV++
Sbjct: 282 FVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320 |
| >gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 69.3 bits (170), Expect = 3e-12
Identities = 49/227 (21%), Positives = 93/227 (40%), Gaps = 20/227 (8%)
Query: 534 IPDQWTLEDAATVPCVYATAVYA-MFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE 592
+PD E AA ATA + + G ++++ G+G +G AI LA+ + A
Sbjct: 138 LPDGIDEEAAALTEP-LATAYHGHAERAAV-RPGGTVVV-VGAGPIGLLAIALAKLLGAS 194
Query: 593 IFTTVGT-PEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSL-AEEK 650
+ V PE+ E ++ + + N + +++ T GRG D+V+ ++ +
Sbjct: 195 VVIVVDRSPERLELAKEAGGA---DVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPA 251
Query: 651 LQASVRCLAQGGRFLEIG--KFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSL 708
L ++ L GG + +G + V +E + G + ++++ +L
Sbjct: 252 LDQALEALRPGGTVVVVGVYGGEDIPLPA--GLVVSKELTLRGSL---RPSGREDFERAL 306
Query: 709 QKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGK-HIGKVIIKI 754
ID + L+ P D EA+ A K KV++K
Sbjct: 307 DLLASGKID---PEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350
|
Length = 350 |
| >gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Score = 69.0 bits (170), Expect = 3e-12
Identities = 43/210 (20%), Positives = 88/210 (41%), Gaps = 21/210 (10%)
Query: 552 TAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFP 611
TA + + G+ + GE++++ A +G VG +A+ + A + G+ EK ++ +
Sbjct: 132 TAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELG 191
Query: 612 F---IKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIG 668
F I N + + + + G+D+ +++ E L A++ L +GGR G
Sbjct: 192 FDAAI------NYKTPDLAEALKEAAPD-GIDVYFDNVGGEILDAALTLLNKGGRIALCG 244
Query: 669 ------KFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQ 722
+ LG + R T G ++ ++ E L K + G ++
Sbjct: 245 AISQYNATEPPGPKNLGNIITKRLT-MQGFIVSDYADRFPEA----LAELAKWLAEGKLK 299
Query: 723 PLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752
+ + EAF + GK+ GK+++
Sbjct: 300 YREDVVEGLENAPEAFLGLFTGKNTGKLVV 329
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 5e-12
Identities = 54/236 (22%), Positives = 95/236 (40%), Gaps = 37/236 (15%)
Query: 529 EMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARY 588
E A+ + + + AT PC Y+TA M + GE++L+ SGGVG A + LA+
Sbjct: 142 ENAYPVNSPLSDVELATFPCSYSTA-ENMLERAGVGAGETVLVTGASGGVGSALVQLAKR 200
Query: 589 MDAEIFTTVGTPEKREFIRK--TFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSL 646
A + G K E +R I + + K G VD+V + +
Sbjct: 201 RGAIVIAVAG-AAKEEAVRALGADTVILRDAPLLADA--------KALGGEPVDVVADVV 251
Query: 647 AEEKLQASVRCLAQGGRFLEIG-------KFDLANNNMLGMEVFMRETSFHG-VMLDNFF 698
+R L GGR++ G + DL +++++ + G +
Sbjct: 252 GGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLR-------TLYLKDLTLFGSTLGTREV 304
Query: 699 FAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754
F L + I+ G ++P+V FP ++ EA +H+GK+++
Sbjct: 305 FRR----------LVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350 |
| >gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 68.0 bits (167), Expect = 9e-12
Identities = 57/232 (24%), Positives = 90/232 (38%), Gaps = 35/232 (15%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
+PD AA + C +ATA A+ +++ GE + +H G GGVG +A+ +A + A +
Sbjct: 134 LPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVH-GCGGVGLSAVMIASALGARV 192
Query: 594 FTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSL-AEEKLQ 652
+K E R+ + S V T G G + +++L E +
Sbjct: 193 IAVDIDDDKLELARE---LGAVATVNASEVEDVAAAVRDLTGG-GAHVSVDALGIPETCR 248
Query: 653 ASVRCLAQGGRFLEIGKFDLANNNMLGME---------VFMRETSFHGVMLDNFFFAEQE 703
SV L + GR +++G LG E V RE G
Sbjct: 249 NSVASLRKRGRHVQVGL-------TLGEEAGVALPMDRVVARELEIVGS------HGMPA 295
Query: 704 WKMSLQKALQKAIDAGAVQP--LV-RTIFPEDKVEEAFRYMAAGKHIGKVII 752
+ A+ I +G + P LV RTI D+ +A M G +I
Sbjct: 296 HRYD---AMLALIASGKLDPEPLVGRTI-SLDEAPDALAAMDDYATAGITVI 343
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345 |
| >gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Score = 66.5 bits (163), Expect = 2e-11
Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 24/227 (10%)
Query: 533 EIPDQWTLEDAATV-P--CVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYM 589
++PD + E+AA V P C A ++ G+++L+ G+G +G LA+
Sbjct: 135 KLPDNVSFEEAALVEPLACCINAQRKA-----GIKPGDTVLV-IGAGPIGLLHAMLAKAS 188
Query: 590 DAE-IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE 648
A + + + EF +K + I ++ + + V + T GRG D+V+ +
Sbjct: 189 GARKVIVSDLNEFRLEFAKK---LGADYTI-DAAEEDLVEKVRELTDGRGADVVIVATGS 244
Query: 649 EKLQA-SVRCLAQGGRFLEIGKFDLANNNMLGME-VFMRETSFHGVMLDNFFFAEQEWKM 706
+ QA ++ + +GGR L G + + + RE + G + + +++K
Sbjct: 245 PEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGS----YAASPEDYKE 300
Query: 707 SLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753
+L+ ID V+ L+ FP + +EEAF A GK + K++I
Sbjct: 301 ALELIASGKID---VKDLITHRFPLEDIEEAFELAADGKSL-KIVIT 343
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343 |
| >gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 63.9 bits (156), Expect = 1e-10
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 14/161 (8%)
Query: 508 GKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGE 567
G RV+GL + + A +PD + AAT+P TA+ A+ G G
Sbjct: 76 GARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRR-GGPLLGR 134
Query: 568 SILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFE 627
+L+ SGGVG+ A+ LA A + VG+P + E +R E +G S +
Sbjct: 135 RVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLR--ELGAAEVVVGGSELSGAP 192
Query: 628 QLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIG 668
VDLV++S+ +L ++ LA GG + +G
Sbjct: 193 -----------VDLVVDSVGGPQLARALELLAPGGTVVSVG 222
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305 |
| >gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 64.7 bits (158), Expect = 1e-10
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 9/168 (5%)
Query: 503 RLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQ 562
D G M G LA +P+ ++A + C TA A+
Sbjct: 127 FRLDGGPVYMYSMGG--LAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAAD 184
Query: 563 MQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT-PEKREFIRKTFPFIKEENIGNS 621
++ GE++ + G GGVG +AI LA+ A V EK ++ + + N+
Sbjct: 185 VRPGETVAV-IGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKE----LGATHTVNA 239
Query: 622 RDTSFEQLVMKRTKGRGVDLVLNSLA-EEKLQASVRCLAQGGRFLEIG 668
+ + T GRGVD+V+ +L E + ++ + GGR + +G
Sbjct: 240 AKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVG 287
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367 |
| >gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 61.0 bits (149), Expect = 6e-10
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K ++ G G G +A+ L +GA +V+ S + G +AL +I + + L
Sbjct: 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASS-EAGAEALVAEI-GALGGKALAV 60
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D++ V + EA + G VD + N A + +D L ED++ + N T
Sbjct: 61 QGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVI--DTNLTGV 118
Query: 899 FDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNYGMA 934
F ++ + + G+ + SSV GN GQ NY +
Sbjct: 119 F-NLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAAS 158
|
Length = 248 |
| >gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 7e-10
Identities = 58/277 (20%), Positives = 98/277 (35%), Gaps = 34/277 (12%)
Query: 506 DSGKRVMGL-TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICG--- 561
S +R+ G T+ S A P T E+AA ATA Y + G
Sbjct: 127 SSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATA-YRQ-LVGWNP 184
Query: 562 -QMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFI----------RKTF 610
++ G+++LI +GG+G A LAR V +PEK E+ R F
Sbjct: 185 AAVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRSLGAEAVIDRNDF 244
Query: 611 PFIKEENIGNSRD--------TSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGG 662
N++ F + + + T G D+V SV +GG
Sbjct: 245 GHWGRLPDHNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVYVCRRGG 304
Query: 663 RFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQ 722
+ G N++ ++MR+ G N +A + G +
Sbjct: 305 MVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFANL--------REAYEANRLVAK-GRID 355
Query: 723 PLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEP 759
P + +P +++ +A + + H G V + + P
Sbjct: 356 PTLSKTYPLEEIGQAHQDVHRNHHQGNVAVLVLAPRP 392
|
The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398 |
| >gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 2e-09
Identities = 61/285 (21%), Positives = 99/285 (34%), Gaps = 62/285 (21%)
Query: 506 DSGKRVMGL-TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFIC---G 561
D +R+ G T+ S A P + E+AA V ATA Y M
Sbjct: 131 DPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATA-YRMLFGWNPN 189
Query: 562 QMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFI----------RKTFP 611
++ G+++LI SGG+G AI LAR A V + EK E+ R+ F
Sbjct: 190 TVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRDFD 249
Query: 612 --FIKEE--NIGNSRDT----SFEQLVMKRT-KGRGVDLVLNSLAEEKLQASVRCLAQGG 662
+ + + + T F + + D+V SV +GG
Sbjct: 250 HWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGG 309
Query: 663 RFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQ--------- 713
M V T+ + DN + W M QK +Q
Sbjct: 310 -----------------MVVICAGTTGYNHTYDNRYL----W-MR-QKRIQGSHFANDRE 346
Query: 714 -----KAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKH-IGKVII 752
+ + G + P + +F D+ +A + M +H +G + +
Sbjct: 347 AAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAV 391
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 2e-09
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 5/158 (3%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
S K ++ G G G +A L GAR +V RS + +AL I ++ +
Sbjct: 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSE-EEAAEALAAAIKEAGGGRAAAV 62
Query: 840 TDDIT-TEAGVVNLLTEA-NKLGPVDGIFNLA-VVLKDALFENQTPEDFNASLGPKANAT 896
D++ E V L+ A + G +D + N A + DA E T ED++ +
Sbjct: 63 AADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGA 122
Query: 897 KYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934
+ + + + V SSV+ G GQ Y +
Sbjct: 123 FLLTRAALPLMK-KQRIVNISSVAGLGGPPGQAAYAAS 159
|
Length = 251 |
| >gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 4e-09
Identities = 49/228 (21%), Positives = 90/228 (39%), Gaps = 32/228 (14%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
+PD AA T +A+ G+++ GE++L+ G GG+G A+ +A+ M A +
Sbjct: 134 VPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLV-IGLGGLGLNAVQIAKAMGAAV 192
Query: 594 FTTVGTPEKREFIRKTFPFIKEENIG-----NSRDTSFEQLVMKRTKGRGVDLVLN-SLA 647
EK E ++ +G NS D S + G G D++ +
Sbjct: 193 IAVDIKEEKLELAKE---------LGADEVLNSLDDSPKDKKAA-GLGGGFDVIFDFVGT 242
Query: 648 EEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFM-RETSFHGVMLDNFFFAEQEW-K 705
+ + + + + GGR + +G + + + + RE G +F
Sbjct: 243 QPTFEDAQKAVKPGGRIVVVGL--GRDKLTVDLSDLIARELRIIG----SF------GGT 290
Query: 706 MSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753
+ I G + P V T P D++ E + GK G+V++
Sbjct: 291 PEDLPEVLDLIAKGKLDPQVETR-PLDEIPEVLERLHKGKVKGRVVLV 337
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338 |
| >gnl|CDD|187657 cd08954, KR_1_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 1, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 1e-08
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 300 KSPVKISPLVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCIRK 359
+ V F ++ IL+ LA T++ + ++L + SG+IG R+
Sbjct: 92 IQSPTDKSEFLPVEEQTFEYVEILKSLLA---TASCKPVLLTADGCESSGVIGAVRYFRE 148
Query: 360 ETGGERTRCFEILDKNA--PPFNPEDPFYKVQVEKDLAV-NILRNGQWGTYRHSILQ 413
E + RC + + N+ P Y +V+K+ + N+ ++G WG +RH +L
Sbjct: 149 EPQLKLIRCLFVSNLNSQKEPIIRNGKVYYERVKKNSNIKNVYKSGSWGDFRHLLLD 205
|
NADP-dependent KR domain of the multidomain type I FAS, a complex SDR family. This subfamily also includes proteins identified as polyketide synthase (PKS), a protein with related modular protein architecture and similar function. It includes the KR domains of mammalian and chicken FAS, and Dictyostelium discoideum putative polyketide synthases (PKSs). These KR domains contain two subdomains, each of which is related to SDR Rossmann fold domains. However, while the C-terminal subdomain has an active site similar to the other SDRs and a NADP-binding capability, the N-terminal SDR-like subdomain is truncated and lacks these functions, serving a supportive structural role. In some instances, such as porcine FAS, an enoyl reductase (a Rossman fold NAD-binding domain of the medium-chain dehydrogenase/reductase, MDR family) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-ketoacyl reductase (KR), forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-enoyl reductase (ER); this KR and ER are members of the SDR family. This KR subfamily has an active site tetrad with a similar 3D orientation compared to archetypical SDRs, but the active site Lys and Asn residue positions are swapped. The characteristic NADP-binding is typical of the multidomain complex SDRs, with a GGXGXXG NADP binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 452 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 42/184 (22%), Positives = 72/184 (39%), Gaps = 24/184 (13%)
Query: 785 IICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDIT 844
++ G G G +A L GA+ +VL R+ + ++ + D++
Sbjct: 2 LVTGASSGIGRAIARRLAREGAK-VVLADRNEEA----LAELAAIEALGGNAVAVQADVS 56
Query: 845 TEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASL-----GPKANATKY 898
E V L+ EA + G +D + N A + + E T ED++ L G T+
Sbjct: 57 DEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGV-FLLTRA 115
Query: 899 FDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEW 957
+ M G+ V SSV+ R GQ Y + + +E + + LA+E
Sbjct: 116 ALPH---MKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRS--------LALEL 164
Query: 958 GAVG 961
G
Sbjct: 165 APYG 168
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 2e-08
Identities = 67/304 (22%), Positives = 117/304 (38%), Gaps = 66/304 (21%)
Query: 495 VIGFEYSGRLRDSGKRVMGLTSG------------------RSLANCCET-DV------- 528
++G E SG + + G+ V GL G + NCCE V
Sbjct: 56 ILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDG 115
Query: 529 ---------EMAWEIPDQWTLEDAATVPC--VYATAVYAMFICGQMQKGESILIHAGSGG 577
A +P+ +L+ AA V + A AV + G+++L+ G+G
Sbjct: 116 GFAEYIVVPADALLVPEGLSLDQAALVEPLAIGAHAVRR----AGVTAGDTVLV-VGAGP 170
Query: 578 VGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGR 637
+G I +A+ A + E+ EF R+ ++ I N D + + T G
Sbjct: 171 IGLGVIQVAKARGARVIVVDIDDERLEFARE---LGADDTI-NVGDEDVAARLRELTDGE 226
Query: 638 GVDLVLNSL-AEEKLQASVRCLAQGGR--FLEIGKFDLANNNMLGMEVFMRETSFHGVML 694
G D+V+++ ++ +V +A GGR + + K + E +E + G
Sbjct: 227 GADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFP---DPEFHKKELTILGSRN 283
Query: 695 -DNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAA-GKHIGKV 750
F + + +++G V P L+ FP + V EAF A + KV
Sbjct: 284 ATREDFPD----------VIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKV 333
Query: 751 IIKI 754
+I+
Sbjct: 334 LIEF 337
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 2e-08
Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 19/227 (8%)
Query: 533 EIPDQWTLEDAATV-PCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA 591
+IPD E+AA + P A A++A+ + + G+++++ G+G +G AI + + A
Sbjct: 129 KIPDHVDYEEAAMIEPA--AVALHAVRL-AGITLGDTVVV-IGAGTIGLLAIQWLKILGA 184
Query: 592 EIFTTVG-TPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSL-AEE 649
+ V EK R+ + ++ N ++ E+ V + T+GRG DLV+ + +
Sbjct: 185 KRVIAVDIDDEKLAVARE----LGADDTINPKEEDVEK-VRELTEGRGADLVIEAAGSPA 239
Query: 650 KLQASVRCLAQGGR--FLEIGKFDLANNNMLGMEVFMRETSFHGV-MLDNFFFAEQEWKM 706
++ ++ GG+ + I D+ + ++ +E + G + F EW+
Sbjct: 240 TIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRT 299
Query: 707 SLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGK-HIGKVII 752
+L I V+PL+ P + AF +A + GKV++
Sbjct: 300 ALDLLASGKIK---VEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343 |
| >gnl|CDD|214834 smart00823, PKS_PP, Phosphopantetheine attachment site | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 2e-08
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 1022 IVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI 1074
+ + V +LG + + +LG+DS+MAVE++ LE + L +
Sbjct: 17 VREQVAAVLGHAAAEAIDPDRPFRDLGLDSLMAVELRNRLEAATGLRLPATLV 69
|
Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. Length = 86 |
| >gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 3e-08
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+K ++ G GG G LA+ L GAR L+L R+ K +AL ++ Y +
Sbjct: 4 KDKRVLLTGASGGIGQALAEALAAAGAR-LLLVGRNAEK--LEALAARL--PYPGRHRWV 58
Query: 840 TDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLG 890
D+T+EAG +L A ++G ++ + N A V AL E+Q PE L
Sbjct: 59 VADLTSEAGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLA 109
|
Length = 263 |
| >gnl|CDD|225856 COG3319, COG3319, Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 3e-08
Identities = 50/238 (21%), Positives = 76/238 (31%), Gaps = 42/238 (17%)
Query: 1159 TIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNPPDTIPEMADSLLPHFKKR 1212
+F G PLA + + V+ P ++ +MA + + R
Sbjct: 2 PLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQPFASLDDMAAAYVA--AIR 59
Query: 1213 LVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDY------VLTSLRKL 1265
V L+G+S GG VA E+A +LE G + L L+D+ P + R+
Sbjct: 60 RVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPPHNGRKEETRNRWRRY 119
Query: 1266 PDWNAKLNYFLDL---------MPEDATH--SRTYQRNLAHAAYKRITSILKYTDPK--- 1311
K LD + +A +R + LA A + IL+
Sbjct: 120 ARTAEKTANGLDPEVLAEILASLGAEAAEYLARALEA-LAQAGLDKAAFILELEAALLLR 178
Query: 1312 --------HKAFGGNITLLRPTEQALPTA--EDYGLSKVCKKPVKVHFVDGNHFTVLD 1359
K G TL G S V +DG HF +L
Sbjct: 179 VRALGTALFKPSDGLPTLFAADRL-HDEGFPPLAGWSGWIADLDIVR-IDGTHFDMLK 234
|
Length = 257 |
| >gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 5e-08
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 14/142 (9%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
+PD E AA C AT + A+ G + G+++++ G+G +G A+ A+ A
Sbjct: 146 VPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQ-GAGPLGLYAVAAAKLAGARR 204
Query: 594 FTTVGTPEKREFIRKTF---PFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVL----NSL 646
+ +R + + F I +I D +V T GRG D+V+ +
Sbjct: 205 VIVIDGSPERLELAREFGADATI---DIDELPDPQRRAIVRDITGGRGADVVIEASGHPA 261
Query: 647 AEEKLQASVRCLAQGGRFLEIG 668
A + + L +GG ++ +G
Sbjct: 262 A---VPEGLELLRRGGTYVLVG 280
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361 |
| >gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 55.6 bits (135), Expect = 8e-08
Identities = 52/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
IPD + E AA + C T VY ++ G+ ++I GG+G + A+ M +
Sbjct: 135 IPDGLSFEQAAPLLCAGVT-VYKALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRV 193
Query: 594 FTTVGTPEKREFIRKTFP--FIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLN-SLAEEK 650
EK E ++ F+ + + + + V + T G G V+ +++
Sbjct: 194 IAIDVGDEKLELAKELGADAFV------DFKKSDDVEAVKELTGGGGAHAVVVTAVSAAA 247
Query: 651 LQASVRCLAQGGRFLEIGKFDLANNNMLGMEVF---MRET----SFHGVMLDNFFFAEQE 703
+ ++ L GG + +G L + ++ F +R S G D
Sbjct: 248 YEQALDYLRPGGTLVCVG---LPPGGFIPLDPFDLVLRGITIVGSLVGTRQD-------- 296
Query: 704 WKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754
LQ+AL+ A G V+P ++ P + + E F M GK G+V++
Sbjct: 297 ----LQEALEFA-ARGKVKPHIQV-VPLEDLNEVFEKMEEGKIAGRVVVDF 341
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341 |
| >gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 1e-07
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 785 IICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDIT 844
++ G G G +A L GA K+++T RS + + + ++ K+Y V+ L D++
Sbjct: 2 LVTGASRGIGRAIALKLAKEGA-KVIITYRSSEEGA-EEVVEEL-KAYGVKALGVVCDVS 58
Query: 845 TEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFD--- 900
V ++ E +LGP+D + N A + +D L ED++A + N T F+
Sbjct: 59 DREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVI--DTNLTGVFNLTQ 116
Query: 901 KYSRTMCPT-LGQFVVFSSVSCGRGNAGQTNY--------GMANSI 937
R M G+ + SSV GNAGQ NY G S+
Sbjct: 117 AVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSL 162
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 1e-07
Identities = 47/226 (20%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE- 592
+PD + D A + C TA Y + +++L+ G+G VG A+ LAR + AE
Sbjct: 133 LPDDLSFADGALLLCGIGTA-YHALRRVGVSGRDTVLV-VGAGPVGLGALMLARALGAED 190
Query: 593 IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLN-SLAEEKL 651
+ +PE+ E + + + + NS ++ + + T G G D+ + S
Sbjct: 191 VIGVDPSPERLELAKA----LGADFVINSGQDDVQE-IRELTSGAGADVAIECSGNTAAR 245
Query: 652 QASVRCLAQGGRFLEIGK-----FDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKM 706
+ ++ + GR + +G+ +++N ++ ++ + G +++F+ + +
Sbjct: 246 RLALEAVRPWGRLVLVGEGGELTIEVSN------DLIRKQRTLIG----SWYFSVPDMEE 295
Query: 707 SLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752
+ + ++ V LV F D+ EA+ A G+ GKV+
Sbjct: 296 CAEFLARHKLE---VDRLVTHRFGLDQAPEAYALFAQGE-SGKVVF 337
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339 |
| >gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 2e-07
Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 37/246 (15%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQ-MQKGESILIHAGSGGVGQAAINLARYMDAE 592
P+ +LE+AA P V TA + GQ + +L+ GS VG+ AI LA+
Sbjct: 119 KPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYN- 177
Query: 593 IFTTVGTPEKREFIRKTFPFIKE---ENIGNSRDTSFEQL---VMKRTKGRG-VDLVLNS 645
I T VGT R + K+ ++ + S +L V++ KG+G DL+L+
Sbjct: 178 IGTVVGTCSSR-----SAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDC 232
Query: 646 LAEEKLQAS----VRCLAQGGRFLEI-G--KFDLAN---NNMLGMEVFMRET-------S 688
+ L ++ ++ G ++ I G K + N+ R+ S
Sbjct: 233 VGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWS 292
Query: 689 FHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIG 748
++ +W + L I G V+P + +++P + +EAF + + + G
Sbjct: 293 YNYQFF--LLDPNADW-IEKCAEL---IADGKVKPPIDSVYPFEDYKEAFERLKSNRAKG 346
Query: 749 KVIIKI 754
KV+IK+
Sbjct: 347 KVVIKV 352
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352 |
| >gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 52.9 bits (128), Expect = 3e-07
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 7/153 (4%)
Query: 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTD 841
K ++ G G G +A L GA K+ +T RS + +I K+
Sbjct: 1 KVALVTGASRGIGRAIALRLAAEGA-KVAVTDRS--EEAAAETVEEI-KALGGNAAALEA 56
Query: 842 DITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFD 900
D++ V L+ + + GPVD + N A + +D L + ED++A +
Sbjct: 57 DVSDREAVEALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEEDWDAVINVNLTGVFNVT 116
Query: 901 K-YSRTMCPT-LGQFVVFSSVSCGRGNAGQTNY 931
+ R M G+ + SSV GN GQ NY
Sbjct: 117 QAVIRAMIKRRSGRIINISSVVGLIGNPGQANY 149
|
This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240 |
| >gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 3e-07
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
+PD + E AA T Y + +++ E L HA +GGVG A A+ + A++
Sbjct: 109 LPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKL 168
Query: 594 FTTVGTPEKREFIRKTFPFIKEENIG-----NSRDTSFEQLVMKRTKGRGVDLVLNSLAE 648
TVG+ +K + + + G N R+ + + V + T G+ V +V +S+ +
Sbjct: 169 IGTVGSAQKAQ---------RAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGK 219
Query: 649 EKLQASVRCLAQGGRFLEIG 668
+ +AS+ CL + G + G
Sbjct: 220 DTWEASLDCLQRRGLMVSFG 239
|
Length = 327 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 52.9 bits (128), Expect = 3e-07
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 19/164 (11%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K+ ++ G G G +A L GA+ V+ S + +AL ++ ++ + +
Sbjct: 4 QGKTALVTGASRGIGRAIALRLAADGAK--VVIYDSNEEAA-EALAAEL-RAAGGEARVL 59
Query: 840 TDDITTEAGVVNLLTEANK-LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D++ EA V L+ A + G +D + N A + +DAL + ED++ + N T
Sbjct: 60 VFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVID--VNLTGT 117
Query: 899 FDKYSRTMCPTL--------GQFVVFSSVSCGRGNAGQTNYGMA 934
F + L G+ V SSVS GN GQTNY A
Sbjct: 118 F----NVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAA 157
|
Length = 246 |
| >gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 4e-07
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 28/223 (12%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
+PD L AA + C T VY+ + GE + + G GG+G A+ AR M E
Sbjct: 132 LPDGLPLAQAAPLLCAGIT-VYSALRDAGPRPGERVAV-LGIGGLGHLAVQYARAMGFET 189
Query: 594 FTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLN-SLAEEKLQ 652
+P+KRE RK +E + +S +L + G G D++L ++ +
Sbjct: 190 VAITRSPDKRELARKLGA---DEVV-DSG----AELDEQAAAG-GADVILVTVVSGAAAE 240
Query: 653 ASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKAL 712
A++ L +GGR + +G + + + M+ S G + L
Sbjct: 241 AALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG------------RADL 288
Query: 713 QKAID---AGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752
Q+A+D G V+P++ T FP D+ EA+ M G + ++
Sbjct: 289 QEALDFAAEGKVKPMIET-FPLDQANEAYERMEKGDVRFRFVL 330
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330 |
| >gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Score = 53.3 bits (129), Expect = 5e-07
Identities = 55/237 (23%), Positives = 99/237 (41%), Gaps = 42/237 (17%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFIC--GQMQKGESILIHAGSGGVGQAAINLARYMDA 591
+PD +LE+ A V + + V+A C ++ G+++L+ G+G +G +A+ A
Sbjct: 133 LPDNVSLEEGALVEPL-SVGVHA---CRRAGVRPGDTVLV-FGAGPIGLLTAAVAKAFGA 187
Query: 592 EIFTTVGT---PEKREFIRK---TFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLN- 644
V T P + EF ++ T N+ + + + G+G D+V+
Sbjct: 188 --TKVVVTDIDPSRLEFAKELGATHTV----NVRTEDTPESAEKIAELLGGKGPDVVIEC 241
Query: 645 SLAEEKLQASVRCLAQGGRFLEIG------KFDLANNNMLGMEVFMRETSFHGVMLDNFF 698
+ AE +Q ++ GG + +G L +RE GV F
Sbjct: 242 TGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPL-------SAASLREIDIRGV----FR 290
Query: 699 FAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIG-KVIIKI 754
+A + +++ +D V+PL+ FP + EAF A GK KV+I+
Sbjct: 291 YANT-YPTAIELLASGKVD---VKPLITHRFPLEDAVEAFETAAKGKKGVIKVVIEG 343
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343 |
| >gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 8e-07
Identities = 32/164 (19%), Positives = 67/164 (40%), Gaps = 18/164 (10%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ ++ G G G +A L GA +V+ RS + + L + ++ +
Sbjct: 5 MGRVALVTGAARGLGRAIALRLARAGAD-VVVHYRSD-EEAAEELV-EAVEALGRRAQAV 61
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+T +A + + A + G +D + N A + +D + + ++++ + N +
Sbjct: 62 QADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVID--VNLSGV 119
Query: 899 FDKYSRTMCPTL--------GQFVVFSSVSCGRGNAGQTNYGMA 934
F + + G+ V SSV+ G G++NY A
Sbjct: 120 F----HLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAA 159
|
Length = 249 |
| >gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 1e-06
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 504 LRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAA-TVPCVYATAVYAMFICGQ 562
++ +G + A E E+P+ +LE AA T P A AV+A+
Sbjct: 104 NLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAALTEPL--AVAVHAVAERSG 161
Query: 563 MQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSR 622
++ G+++++ G G +G A +A+ A + VGT + + + +E ++
Sbjct: 162 IRPGDTVVV-FGPGPIGLLAAQVAKLQGATV-VVVGTEKDEVRLD-----VAKELGADAV 214
Query: 623 DTSFE---QLVMKRTKGRGVDLVLN-SLAEEKLQASVRCLAQGGRFLEIGKF 670
+ E +LV + T G G D+V+ S A L+ ++ L +GGR +++G F
Sbjct: 215 NGGEEDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIF 266
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306 |
| >gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 1e-06
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Query: 842 DITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDK 901
D+T V + NK + GI + A VL D +++T E+FNA G K +
Sbjct: 2102 DVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSL-- 2159
Query: 902 YSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMER 940
+ + +FSS + GN GQ++Y M+N I+ +
Sbjct: 2160 LAALNAENIKLLALFSSAAGFYGNTGQSDYAMSNDILNK 2198
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. Length = 2582 |
| >gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 2e-06
Identities = 54/237 (22%), Positives = 86/237 (36%), Gaps = 43/237 (18%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
I LE A + C T + A+ +++ G+++ + G GGVG AAI A+ A
Sbjct: 154 IDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAV-FGLGGVGLAAIQGAKAAGAGR 212
Query: 594 FTTVGT-PEKREFIRK-----TFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLA 647
V PEK E +K N ++ + G D +
Sbjct: 213 IIAVDINPEKLELAKKFGATHFV---------NPKEVDDVVEAIVELTDGGADYAFECVG 263
Query: 648 E-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKM 706
E ++ ++ +GG + IG +A G E+ R + WK
Sbjct: 264 NVEVMRQALEATHRGGTSVIIG---VAG---AGQEISTRPFQL---------VTGRVWKG 308
Query: 707 SL------QKALQKAID---AG--AVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752
S + + + +D AG + LV P + + EAF M GK I VI
Sbjct: 309 SAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIR 365
|
Length = 366 |
| >gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR) | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 2e-06
Identities = 45/208 (21%), Positives = 74/208 (35%), Gaps = 55/208 (26%)
Query: 785 IICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDIT 844
++ GG GG G +A WL RG+ K+++ SR V A+ D +++ T
Sbjct: 2 LVTGGSGGIGGAIARWLASRGSPKVLVVSRRDVVVHNAAI------LDDGRLIDLTGSRI 55
Query: 845 TEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSR 904
A N++ G L A + K R
Sbjct: 56 ERAIRANVV----------GTRRLL------------------------EAARELMKAKR 81
Query: 905 TMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAV 960
LG+F++ SSV+ G G Y + + ++ + + +E GLP AV G
Sbjct: 82 -----LGRFILISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGTW 136
Query: 961 GEVGLVADMAEDNL--EVVIGGTLQQRI 986
G MA+ + E ++G
Sbjct: 137 AGSG----MAKGPVAPEEILGNRRHGVR 160
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186 |
| >gnl|CDD|215989 pfam00550, PP-binding, Phosphopantetheine attachment site | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 7e-06
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 1022 IVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIRGLTFAK 1081
+ + V +LG+ D + L +LG+DS++AVE+ LE EF V + P D+
Sbjct: 3 LREIVAEVLGIPD--EIDPDDDLFDLGLDSLLAVELLARLEEEFGVEIPPSDL--FEHPT 58
Query: 1082 LQDIA 1086
L ++A
Sbjct: 59 LGELA 63
|
A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Vibrio anguillarum angR has the attachment serine replaced by an alanine. Length = 66 |
| >gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 8e-06
Identities = 55/226 (24%), Positives = 95/226 (42%), Gaps = 20/226 (8%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
I D L+ AA + C T V A+ +++ G+++ + G GGVG AI AR A
Sbjct: 151 IDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAV-IGCGGVGLNAIQGARIAGASR 209
Query: 594 FTTVGT-PEKREFIRK---TFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE- 648
V PEK E R+ T N+ + + V T GRG D ++
Sbjct: 210 IIAVDPVPEKLELARRFGATHTV-------NASEDDAVEAVRDLTDGRGADYAFEAVGRA 262
Query: 649 EKLQASVRCLAQGGRFLEIGKFDLANN-NMLGMEVFMRETSFHGVML-DNFFFAEQEWKM 706
++ ++ +GG + +G ++ +E+F+ E G + + +
Sbjct: 263 ATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLL 322
Query: 707 SLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752
L +A + +D LV + D++ EAF M AG++ VI+
Sbjct: 323 DLYRAGRLKLDE-----LVTRRYSLDEINEAFADMLAGENARGVIV 363
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363 |
| >gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 9e-06
Identities = 50/195 (25%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 566 GESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIKEENIGNSRDT 624
G+S+LI G G +G AI +A+ A + + P + E +K + + + N R+
Sbjct: 164 GKSVLI-TGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKK----MGADVVINPREE 218
Query: 625 SFEQLVMKRTKGRGVDLVLN-SLAEEKLQASVRCLAQGGRFLEIG------KFDLANNNM 677
+ V T G GVD+VL S + ++ ++ L GGR +G DL N
Sbjct: 219 DVVE-VKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNN--- 274
Query: 678 LGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEA 737
V + + G+ F + W +D + P++ P + EEA
Sbjct: 275 ---LVIFKGLTVQGITGRKMF---ETWYQVSALLKSGKVD---LSPVITHKLPLEDFEEA 325
Query: 738 FRYMAAGKHIGKVII 752
F M +GK GKV++
Sbjct: 326 FELMRSGK-CGKVVL 339
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341 |
| >gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 1e-05
Identities = 35/174 (20%), Positives = 62/174 (35%), Gaps = 17/174 (9%)
Query: 785 IICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVL-ISTDDI 843
++ G G G+E+A L G R + L R+ + DV+ + D
Sbjct: 4 LVTGASRGIGIEIARALARDGYR-VSLGLRNPEDLAALSASG-----GDVEAVPYDARDP 57
Query: 844 TTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYS 903
+V+ L + G +D + + A + + + + A A +
Sbjct: 58 EDARALVDALRDRF--GRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAEL---T 112
Query: 904 RTMCPTL-----GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPG 952
R + P L G+ V +S+S R AG Y + + + A R EG
Sbjct: 113 RALLPALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDH 166
|
This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223 |
| >gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 4e-05
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 24/181 (13%)
Query: 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGV--------KNGYQALRIKIWKSY 832
K ++ G G G +A L+ G +++ T SG + G+ ++++ K
Sbjct: 2 KKIALVTGAKRGIGSAIARELLNDG-YRVIATYFSGNDCAKDWFEEYGFTEDQVRL-KEL 59
Query: 833 DVQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPK 892
DV TD + + E GPVD + N A + +D++F+ + +++N +
Sbjct: 60 DV-----TDTEECAEALAEIEEE---EGPVDILVNNAGITRDSVFKRMSHQEWNDVIN-- 109
Query: 893 ANATKYFDKYSRTMCPTL----GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAE 948
N F+ G+ + SSV+ +G GQTNY A + M +A +E
Sbjct: 110 TNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASE 169
Query: 949 G 949
G
Sbjct: 170 G 170
|
Length = 245 |
| >gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 9e-05
Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 15/176 (8%)
Query: 785 IICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQ-VLISTDDI 843
+I GG G G LA LV GA +++ +RS K I+ + Q V + D+
Sbjct: 5 LITGGSSGIGKALAKELVKEGA-NVIIVARSESKLEEAVEEIEAEANASGQKVSYISADL 63
Query: 844 TTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKY 902
+ V +A K GP D + N A + LFE+ T E+F + YF
Sbjct: 64 SDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGM-----DVNYFGSL 118
Query: 903 --SRTMCPTL-----GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLP 951
+ + P + G V SS + G G + Y + + + E+ R E P
Sbjct: 119 NVAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKP 174
|
These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239 |
| >gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 1e-04
Identities = 38/159 (23%), Positives = 52/159 (32%), Gaps = 32/159 (20%)
Query: 785 IICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDIT 844
I+ G G GL +A L G +++ RS S D QV DIT
Sbjct: 2 IVIGATGTIGLAVAQLLSAHGH-EVITAGRS---------------SGDYQV-----DIT 40
Query: 845 TEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPK----ANATKYFD 900
EA + L + G D I + A + A T DF L K N ++
Sbjct: 41 DEASIKALFEKV---GHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQINLVRHGL 97
Query: 901 KYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIME 939
Y G + S + R G N +E
Sbjct: 98 PYLN----DGGSITLTSGILAQRPIPGGAAAATVNGALE 132
|
Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198 |
| >gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 1e-04
Identities = 52/248 (20%), Positives = 95/248 (38%), Gaps = 48/248 (19%)
Query: 534 IPDQWTLEDAATV---PCVYATAVYAM---FICGQMQKGESILIHAGSGGVGQAAINLAR 587
+P+ E AAT+ PC TA Y + F ++Q G+ ++ + + VGQA I LA+
Sbjct: 115 VPNDVDPEQAATLSVNPC---TA-YRLLEDF--VKLQPGDWVIQNGANSAVGQAVIQLAK 168
Query: 588 YMDAEIFTTV----GTPEKREFIRKT--FPFIKEENIGNSRDTSFEQLVMKRTKGRGVDL 641
+ + V E +E ++ + EE + + T ++K G L
Sbjct: 169 LLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATE----LLKSAPGGRPKL 224
Query: 642 VLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGM----------EVFMRETSFHG 691
LN + + R L+ GG + G GM + ++ + G
Sbjct: 225 ALNCVGGKSATELARLLSPGGTMVTYG----------GMSGQPVTVPTSLLIFKDITLRG 274
Query: 692 VML-DNFFFAEQEWKMSLQKALQKAIDAGAVQP---LVRTIFPEDKVEEAF-RYMAAGKH 746
L A E K + + L + I G ++ T P ++ ++A + G
Sbjct: 275 FWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGG 334
Query: 747 IGKVIIKI 754
GK ++ +
Sbjct: 335 -GKQVLVM 341
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341 |
| >gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 3e-04
Identities = 42/181 (23%), Positives = 63/181 (34%), Gaps = 25/181 (13%)
Query: 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSR-----SGVKNGYQALRIKIWKSYDVQV 836
K I GG GG G A WL RGAR + L R S G A ++I
Sbjct: 8 KVVAITGGFGGLGRATAAWLAARGAR-VALIGRGAAPLSQTLPGVPADALRIGGI----- 61
Query: 837 LISTDDITTEAGVVNLLTE-ANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANA 895
D+ + E + G +D + N+A + + ++ G
Sbjct: 62 -----DLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKT 116
Query: 896 TKYFDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGL 950
T S+ P L G+ V + + + G Y A + + R+ EA AE L
Sbjct: 117 TLNA---SKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELL 173
Query: 951 P 951
Sbjct: 174 D 174
|
Length = 239 |
| >gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 4e-04
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 533 EIPDQWTLEDAATVPCVYATAVYAMFICGQMQ-----KGESILIHAGSGGVGQAAINLAR 587
P + +AA +P TA A+F + +G+++LI G+GGVG AI LA+
Sbjct: 112 HKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAK 171
Query: 588 YM-DAEIFTTVGTPEKREFIRK 608
+ + T PE ++++
Sbjct: 172 QLTGLTVIATASRPESIAWVKE 193
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336 |
| >gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 5e-04
Identities = 66/265 (24%), Positives = 98/265 (36%), Gaps = 45/265 (16%)
Query: 488 RRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVP 547
R + HC G + +G RD G A E IPD +AA +
Sbjct: 99 RGDFVHCENG-KVTGVTRDGG-----------YAEYMLAPAEALARIPDDLDAAEAAPLL 146
Query: 548 CVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIR 607
C T A+ G + G+ + + G GG+G A+ A M +K + R
Sbjct: 147 CAGVTTFNALRNSG-AKPGDLVAVQ-GIGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR 204
Query: 608 K--TFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEK-LQASVRCLAQGGRF 664
K +I DTS E + + G L+L + K + A V LA G+
Sbjct: 205 KLGAHHYI---------DTSKEDVAEALQELGGAKLILATAPNAKAISALVGGLAPRGKL 255
Query: 665 LEIGKFDLANNNMLGMEVFMRETSFH----GVMLDNFFFAEQEWKMSLQKALQKAIDAGA 720
L +G + M S H G LD+ + L+ + G
Sbjct: 256 LILGAAGEPVAVSPLQLI-MGRKSIHGWPSGTALDS------------EDTLKFSALHG- 301
Query: 721 VQPLVRTIFPEDKVEEAFRYMAAGK 745
V+P+V T FP +K EA+ M +GK
Sbjct: 302 VRPMVET-FPLEKANEAYDRMMSGK 325
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333 |
| >gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 7e-04
Identities = 60/287 (20%), Positives = 100/287 (34%), Gaps = 45/287 (15%)
Query: 487 SRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGR------SLANCCETDVEMAWEIPDQWTL 540
+ +L G+ GR+ + G V G G A + +PD
Sbjct: 15 TEKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFGPHAERVVVPANLLVPLPDGLPP 74
Query: 541 EDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT- 599
E AA + ATA+ + + GE + + G G VG A LA+ A VG
Sbjct: 75 ERAALTA-LAATALNG-VRDAEPRLGERVAV-VGLGLVGLLAAQLAKAAGAR--EVVGVD 129
Query: 600 --PEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLN-SLAEEKLQASVR 656
+RE P GRG D+V+ S + L+ ++R
Sbjct: 130 PDAARRELAEALGPADPV-----------AADTADEIGGRGADVVIEASGSPSALETALR 178
Query: 657 CLAQGGRFLEIGKFDLANNNMLG-------MEVFMRETSFHGVMLDNFFFAEQEWKMSLQ 709
L GR + +G + L LG + + + G + E
Sbjct: 179 LLRDRGRVVLVGWYGLKPLL-LGEEFHFKRLPIRSSQVYGIGRYDRPRRWTE-------A 230
Query: 710 KALQKAID---AGAVQPLVRTIFPEDKVEEAFRYMAAGKHIG-KVII 752
+ L++A+D G ++ L+ P + EA+R + KV++
Sbjct: 231 RNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277 |
| >gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 7e-04
Identities = 54/219 (24%), Positives = 87/219 (39%), Gaps = 31/219 (14%)
Query: 785 IICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGY--QALRIKIW----KSYDVQVLI 838
++ GG+GG G + L G R V R + W + +
Sbjct: 4 LVTGGMGGIGTAICQRLAKDGYR---------VAANCGPNEERAEAWLQEQGALGFDFRV 54
Query: 839 STDDIT----TEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKAN 894
D++ +A V + E LGP+D + N A + +DA F+ T E ++A + N
Sbjct: 55 VEGDVSSFESCKAAVAKVEAE---LGPIDVLVNNAGITRDATFKKMTYEQWSAVID--TN 109
Query: 895 ATKYFD---KYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGL 950
F+ M G+ + SSV+ +G GQTNY A + M +A EG
Sbjct: 110 LNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGA 169
Query: 951 P-GLAVEWGAVGEVG--LVADMAEDNLEVVIGGTLQQRI 986
G+ V + G + +V M ED L ++ R+
Sbjct: 170 TKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRL 208
|
This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242 |
| >gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 9e-04
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
+PD T E A +P + +T + ++ G+++ + G G VG A+ AR A
Sbjct: 136 LPDGLTDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVF-GIGPVGLMAVAGARLRGAGR 193
Query: 594 FTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSL-AEEKLQ 652
VG+ R + K + +I + ++ + ++K T G+GVD V+ + ++ +
Sbjct: 194 IIAVGSRPNRVELAKEY---GATDIVDYKNGDVVEQILKLTGGKGVDAVIIAGGGQDTFE 250
Query: 653 ASVRCLAQGGRFLEIGKFDLANNNMLG 679
+++ L GG ++N N G
Sbjct: 251 QALKVLKPGGT--------ISNVNYYG 269
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351 |
| >gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 0.002
Identities = 66/329 (20%), Positives = 122/329 (37%), Gaps = 72/329 (21%)
Query: 462 QIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDS-------GKRVMGL 514
+++YSS+N++D + T V R Y H G + +G + S G V
Sbjct: 33 RVHYSSLNYKDALAATGN--GGVT---RNYPH-TPGIDAAGTVVSSDDPRFREGDEV--- 83
Query: 515 TSGRSLANCCE----TD--------VEMAW--EIPDQWTLEDAATVPCVYATA------- 553
L + TD V W +P+ +L +A + TA
Sbjct: 84 -----LVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAM----ILGTAGFTAALS 134
Query: 554 VYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFI 613
V+ + GQ + +L+ +GGVG A+ + + + G E+ ++++
Sbjct: 135 VHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKS----- 189
Query: 614 KEENIGNS----RDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGK 669
+G S R+ ++ K R ++++ + L ++ GG G
Sbjct: 190 ----LGASEVLDREDLLDESKKPLLKAR-WAGAIDTVGGDVLANLLKQTKYGGVVASCGN 244
Query: 670 FDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKA----LQKAIDAGAVQPLV 725
+ +R S G+ D+ M L+K L ++ +V
Sbjct: 245 AAGPELTTTVLPFILRGVSLLGI--DS-----VNCPMELRKQVWQKLATEWKPDLLEIVV 297
Query: 726 RTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754
R I E+ + EA + AGKH G+ ++KI
Sbjct: 298 REISLEE-LPEAIDRLLAGKHRGRTVVKI 325
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 0.002
Identities = 47/227 (20%), Positives = 90/227 (39%), Gaps = 21/227 (9%)
Query: 531 AWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMD 590
++PD + E A + + T + Q++ G+++ + G G VG A+ A+ +
Sbjct: 134 LLKLPDGLSDEAALLLGDILPTGYFGA-KRAQVRPGDTVAV-IGCGPVGLCAVLSAQVLG 191
Query: 591 AE-IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSL-AE 648
A +F PE+ E + E I N D + V + T+GRG D+VL ++
Sbjct: 192 AARVFAVDPVPERLERAAA----LGAEPI-NFEDAEPVERVREATEGRGADVVLEAVGGA 246
Query: 649 EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSL 708
L + + GG +G G++ + + + SL
Sbjct: 247 AALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCP---------VRSL 297
Query: 709 QKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753
L +++G + L+ P ++ EA+R K + KV++
Sbjct: 298 FPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRK-VLKVVLD 343
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344 |
| >gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.002
Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 9/108 (8%)
Query: 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSG--VKNGYQALRIKIWKSYDVQVLI 838
K ++ G GL +A L GAR + + +R+ ++ LR VL
Sbjct: 1 GKVALVTAASSGIGLAIARALAREGAR-VAICARNRENLERAASELRA-----GGAGVLA 54
Query: 839 STDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDF 885
D+T + L+ +A + G VD + N A F T ED+
Sbjct: 55 VVADLTDPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDW 102
|
This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 41.3 bits (98), Expect = 0.003
Identities = 47/220 (21%), Positives = 87/220 (39%), Gaps = 37/220 (16%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
IP+ AA + C T VY+ + G+ + + G GG+G A+ A+ + AE+
Sbjct: 139 IPEGLDSAAAAPLLCAGIT-VYSPLKRNGVGPGKRVGV-VGIGGLGHLAVKFAKALGAEV 196
Query: 594 --FTTVGTPEKREFIRKTFPFIKEENIG-----NSRDTSFEQLVMKRTKGRGVDLVLNSL 646
F+ +P K+E K +G ++D MK+ G +DL+++++
Sbjct: 197 TAFSR--SPSKKEDALK---------LGADEFIATKDPEA----MKKAAGS-LDLIIDTV 240
Query: 647 AEEK-LQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWK 705
+ L + L GG + +G + + S G ++ +
Sbjct: 241 SASHDLDPYLSLLKPGGTLVLVG-APEEPLPVPPFPLIFGRKSVAGSLIGG--------R 291
Query: 706 MSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGK 745
Q+ L A + G ++P V P D + EA + G
Sbjct: 292 KETQEMLDFAAEHG-IKPWVEV-IPMDGINEALERLEKGD 329
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.003
Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 4/108 (3%)
Query: 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIST 840
K ++ GG G G +A RGA LV+ R+ K QA + ++ + +
Sbjct: 6 GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAEL---EALGAKAVFVQ 62
Query: 841 DDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNA 887
D++ ++ A G +D + N A + + +PE F+
Sbjct: 63 ADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDR 110
|
Length = 260 |
| >gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.004
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 835 QVLISTDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASL---- 889
+ + + DDI G NL+ A G +D + N A +L+D + N + E+++A +
Sbjct: 65 EAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHL 124
Query: 890 ----GPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934
+A Y+ S+ + + SS + +G+ GQ NY A
Sbjct: 125 KGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAA 173
|
Length = 286 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1392 | |||
| KOG1202|consensus | 2376 | 100.0 | ||
| KOG1197|consensus | 336 | 100.0 | ||
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 100.0 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 100.0 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 100.0 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 100.0 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 100.0 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 100.0 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 100.0 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 100.0 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 100.0 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 100.0 | |
| KOG0023|consensus | 360 | 100.0 | ||
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 100.0 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 100.0 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 100.0 | |
| COG1062 | 366 | AdhC Zn-dependent alcohol dehydrogenases, class II | 100.0 | |
| TIGR02822 | 329 | adh_fam_2 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 100.0 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 100.0 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 100.0 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 100.0 | |
| KOG0024|consensus | 354 | 100.0 | ||
| KOG1198|consensus | 347 | 100.0 | ||
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 100.0 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 100.0 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 100.0 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 99.98 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 99.98 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 99.98 | |
| PLN02514 | 357 | cinnamyl-alcohol dehydrogenase | 99.98 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 99.97 | |
| TIGR02817 | 336 | adh_fam_1 zinc-binding alcohol dehydrogenase famil | 99.97 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 99.97 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 99.97 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 99.97 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 99.97 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 99.97 | |
| cd08277 | 365 | liver_alcohol_DH_like Liver alcohol dehydrogenase. | 99.97 | |
| TIGR02823 | 323 | oxido_YhdH putative quinone oxidoreductase, YhdH/Y | 99.97 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 99.97 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 99.97 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 99.97 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 99.97 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 99.97 | |
| cd08296 | 333 | CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci | 99.97 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 99.97 | |
| cd08274 | 350 | MDR9 Medium chain dehydrogenases/reductase (MDR)/z | 99.97 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 99.97 | |
| cd08270 | 305 | MDR4 Medium chain dehydrogenases/reductase (MDR)/z | 99.97 | |
| cd08249 | 339 | enoyl_reductase_like enoyl_reductase_like. Member | 99.97 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.97 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 99.97 | |
| cd05284 | 340 | arabinose_DH_like D-arabinose dehydrogenase. This | 99.97 | |
| cd08251 | 303 | polyketide_synthase polyketide synthase. Polyketid | 99.97 | |
| cd08263 | 367 | Zn_ADH10 Alcohol dehydrogenases of the MDR family. | 99.97 | |
| cd08237 | 341 | ribitol-5-phosphate_DH ribitol-5-phosphate dehydro | 99.97 | |
| KOG0022|consensus | 375 | 99.97 | ||
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 99.97 | |
| cd08276 | 336 | MDR7 Medium chain dehydrogenases/reductase (MDR)/z | 99.97 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 99.97 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 99.96 | |
| cd08278 | 365 | benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be | 99.96 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 99.96 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 99.96 | |
| cd08273 | 331 | MDR8 Medium chain dehydrogenases/reductase (MDR)/z | 99.96 | |
| cd08261 | 337 | Zn_ADH7 Alcohol dehydrogenases of the MDR family. | 99.96 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 99.96 | |
| cd08272 | 326 | MDR6 Medium chain dehydrogenases/reductase (MDR)/z | 99.96 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 99.96 | |
| cd08285 | 351 | NADP_ADH NADP(H)-dependent alcohol dehydrogenases. | 99.96 | |
| cd08271 | 325 | MDR5 Medium chain dehydrogenases/reductase (MDR)/z | 99.96 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 99.96 | |
| cd05278 | 347 | FDH_like Formaldehyde dehydrogenases. Formaldehyde | 99.96 | |
| cd08283 | 386 | FDH_like_1 Glutathione-dependent formaldehyde dehy | 99.96 | |
| cd08240 | 350 | 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy | 99.96 | |
| cd05195 | 293 | enoyl_red enoyl reductase of polyketide synthase. | 99.96 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 99.96 | |
| PRK10083 | 339 | putative oxidoreductase; Provisional | 99.96 | |
| cd08252 | 336 | AL_MDR Arginate lyase and other MDR family members | 99.96 | |
| cd08260 | 345 | Zn_ADH6 Alcohol dehydrogenases of the MDR family. | 99.96 | |
| TIGR01202 | 308 | bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl | 99.96 | |
| PRK13771 | 334 | putative alcohol dehydrogenase; Provisional | 99.96 | |
| cd08256 | 350 | Zn_ADH2 Alcohol dehydrogenases of the MDR family. | 99.96 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 99.96 | |
| cd08279 | 363 | Zn_ADH_class_III Class III alcohol dehydrogenase. | 99.96 | |
| cd08288 | 324 | MDR_yhdh Yhdh putative quinone oxidoreductases. Yh | 99.96 | |
| cd08284 | 344 | FDH_like_2 Glutathione-dependent formaldehyde dehy | 99.96 | |
| PRK09422 | 338 | ethanol-active dehydrogenase/acetaldehyde-active r | 99.96 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.96 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 99.96 | |
| cd08275 | 337 | MDR3 Medium chain dehydrogenases/reductase (MDR)/z | 99.96 | |
| KOG0025|consensus | 354 | 99.96 | ||
| cd08235 | 343 | iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ | 99.96 | |
| cd08299 | 373 | alcohol_DH_class_I_II_IV class I, II, IV alcohol d | 99.96 | |
| cd05283 | 337 | CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam | 99.96 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 99.96 | |
| cd08254 | 338 | hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo | 99.95 | |
| cd05279 | 365 | Zn_ADH1 Liver alcohol dehydrogenase and related zi | 99.95 | |
| smart00829 | 288 | PKS_ER Enoylreductase. Enoylreductase in Polyketid | 99.95 | |
| cd08248 | 350 | RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu | 99.95 | |
| cd08286 | 345 | FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik | 99.95 | |
| cd08269 | 312 | Zn_ADH9 Alcohol dehydrogenases of the MDR family. | 99.95 | |
| cd08262 | 341 | Zn_ADH8 Alcohol dehydrogenases of the MDR family. | 99.95 | |
| cd08247 | 352 | AST1_like AST1 is a cytoplasmic protein associated | 99.95 | |
| cd08265 | 384 | Zn_ADH3 Alcohol dehydrogenases of the MDR family. | 99.95 | |
| cd05285 | 343 | sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a | 99.95 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.95 | |
| cd08236 | 343 | sugar_DH NAD(P)-dependent sugar dehydrogenases. Th | 99.95 | |
| COG1063 | 350 | Tdh Threonine dehydrogenase and related Zn-depende | 99.95 | |
| cd08282 | 375 | PFDH_like Pseudomonas putida aldehyde-dismutating | 99.95 | |
| cd05289 | 309 | MDR_like_2 alcohol dehydrogenase and quinone reduc | 99.95 | |
| cd08267 | 319 | MDR1 Medium chain dehydrogenases/reductase (MDR)/z | 99.95 | |
| TIGR00692 | 340 | tdh L-threonine 3-dehydrogenase. E. coli His-90 mo | 99.95 | |
| cd08234 | 334 | threonine_DH_like L-threonine dehydrogenase. L-thr | 99.94 | |
| cd08264 | 325 | Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam | 99.94 | |
| cd08232 | 339 | idonate-5-DH L-idonate 5-dehydrogenase. L-idonate | 99.94 | |
| cd08245 | 330 | CAD Cinnamyl alcohol dehydrogenases (CAD) and rela | 99.94 | |
| PRK05396 | 341 | tdh L-threonine 3-dehydrogenase; Validated | 99.94 | |
| cd08242 | 319 | MDR_like Medium chain dehydrogenases/reductase (MD | 99.94 | |
| cd08298 | 329 | CAD2 Cinnamyl alcohol dehydrogenases (CAD). These | 99.94 | |
| cd08287 | 345 | FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik | 99.94 | |
| cd05281 | 341 | TDH Threonine dehydrogenase. L-threonine dehydroge | 99.94 | |
| PLN02702 | 364 | L-idonate 5-dehydrogenase | 99.94 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.93 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 99.93 | |
| cd08258 | 306 | Zn_ADH4 Alcohol dehydrogenases of the MDR family. | 99.92 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.92 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 99.91 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.91 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.9 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 99.9 | |
| KOG1200|consensus | 256 | 99.9 | ||
| KOG1196|consensus | 343 | 99.88 | ||
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.88 | |
| KOG1205|consensus | 282 | 99.88 | ||
| KOG1201|consensus | 300 | 99.88 | ||
| cd08255 | 277 | 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ | 99.88 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.87 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.85 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.84 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.84 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.83 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.83 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.83 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.83 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.83 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.82 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.82 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.82 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.82 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.82 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.81 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.81 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.81 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.81 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.81 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.81 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.81 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.81 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.81 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.8 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.8 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.8 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.8 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.8 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.8 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.8 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.8 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.8 | |
| KOG0725|consensus | 270 | 99.8 | ||
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.79 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.79 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.79 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.79 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.79 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.79 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.79 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.79 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.79 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.78 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.78 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.78 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.78 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.78 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.78 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.78 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.78 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.78 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.78 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.78 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.78 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.77 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.77 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.77 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.77 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.77 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.76 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.76 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.76 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.76 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.76 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.76 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.76 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.76 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.75 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.75 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.75 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.75 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.75 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.75 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.75 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.74 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.74 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.74 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.74 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.74 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.74 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.74 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.73 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.73 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.73 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.73 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.73 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.73 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.73 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.72 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.72 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.72 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.72 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.71 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.71 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.71 | |
| KOG4169|consensus | 261 | 99.71 | ||
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.7 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.7 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.7 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.7 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.7 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.7 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.7 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.69 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.69 | |
| KOG1207|consensus | 245 | 99.68 | ||
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.68 | |
| KOG1210|consensus | 331 | 99.68 | ||
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.68 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.67 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.67 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.67 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.67 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 99.67 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.66 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.66 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 99.66 | |
| KOG1199|consensus | 260 | 99.65 | ||
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.65 | |
| KOG1610|consensus | 322 | 99.64 | ||
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.62 | |
| KOG1208|consensus | 314 | 99.62 | ||
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.61 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.6 | |
| KOG1014|consensus | 312 | 99.6 | ||
| KOG1209|consensus | 289 | 99.59 | ||
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.56 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 99.5 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.49 | |
| KOG1611|consensus | 249 | 99.45 | ||
| PRK06720 | 169 | hypothetical protein; Provisional | 99.37 | |
| PF14765 | 295 | PS-DH: Polyketide synthase dehydratase; PDB: 3KG7_ | 99.36 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.35 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.33 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 99.32 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.31 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.31 | |
| KOG1204|consensus | 253 | 99.24 | ||
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.23 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.22 | |
| PF13602 | 127 | ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ | 99.22 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.21 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.2 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.2 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.18 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.17 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.17 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.16 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.14 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.14 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.11 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.1 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.07 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.06 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.04 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.03 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.02 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.01 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.0 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 98.99 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 98.95 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 98.93 | |
| KOG1502|consensus | 327 | 98.92 | ||
| PLN02686 | 367 | cinnamoyl-CoA reductase | 98.92 | |
| KOG1478|consensus | 341 | 98.91 | ||
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 98.9 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 98.88 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 98.84 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 98.83 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 98.8 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 98.79 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 98.79 | |
| PF08240 | 109 | ADH_N: Alcohol dehydrogenase GroES-like domain; In | 98.78 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 98.78 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 98.77 | |
| PF00550 | 67 | PP-binding: Phosphopantetheine attachment site; In | 98.76 | |
| PLN02578 | 354 | hydrolase | 98.76 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 98.75 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 98.74 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 98.72 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 98.71 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 98.71 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 98.7 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 98.69 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 98.65 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 98.65 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 98.65 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 98.64 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 98.63 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 98.62 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 98.62 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 98.62 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 98.61 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 98.6 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 98.59 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 98.56 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 98.56 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 98.52 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 98.52 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 98.51 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 98.51 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 98.48 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 98.48 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 98.47 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 98.46 | |
| PLN02965 | 255 | Probable pheophorbidase | 98.43 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 98.42 | |
| KOG1371|consensus | 343 | 98.41 | ||
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 98.4 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 98.39 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 98.39 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 98.38 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 98.38 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 98.36 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 98.34 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 98.34 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 98.33 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.32 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 98.31 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 98.31 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 98.3 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 98.26 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 98.25 | |
| KOG1430|consensus | 361 | 98.24 | ||
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 98.24 | |
| KOG1454|consensus | 326 | 98.22 | ||
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 98.21 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 98.18 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 98.18 | |
| KOG2382|consensus | 315 | 98.15 | ||
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.11 | |
| PRK00982 | 78 | acpP acyl carrier protein; Provisional | 98.1 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 98.06 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 98.05 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 98.03 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 98.01 | |
| KOG4409|consensus | 365 | 97.99 | ||
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 97.97 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 97.96 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 97.94 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 97.94 | |
| PRK07581 | 339 | hypothetical protein; Validated | 97.93 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 97.9 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 97.9 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 97.87 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 97.83 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 97.82 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 97.8 | |
| CHL00124 | 82 | acpP acyl carrier protein; Validated | 97.8 | |
| PRK06060 | 705 | acyl-CoA synthetase; Validated | 97.77 | |
| smart00826 | 167 | PKS_DH PKS_DH. | 97.76 | |
| PRK05883 | 91 | acyl carrier protein; Validated | 97.76 | |
| smart00823 | 86 | PKS_PP Phosphopantetheine attachment site. Phospho | 97.75 | |
| PRK07081 | 83 | acyl carrier protein; Provisional | 97.69 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 97.68 | |
| PRK09184 | 89 | acyl carrier protein; Provisional | 97.67 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 97.67 | |
| TIGR00517 | 77 | acyl_carrier acyl carrier protein. S (Ser) at posi | 97.67 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 97.64 | |
| PRK05350 | 82 | acyl carrier protein; Provisional | 97.61 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 97.58 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.57 | |
| KOG4022|consensus | 236 | 97.55 | ||
| PRK12449 | 80 | acyl carrier protein; Provisional | 97.53 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 97.52 | |
| KOG1221|consensus | 467 | 97.52 | ||
| PLN02511 | 388 | hydrolase | 97.52 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 97.51 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 97.51 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.5 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 97.48 | |
| PRK07117 | 79 | acyl carrier protein; Validated | 97.47 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 97.42 | |
| PRK05828 | 84 | acyl carrier protein; Validated | 97.39 | |
| PRK07639 | 86 | acyl carrier protein; Provisional | 97.38 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 97.37 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 97.37 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 97.35 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 97.35 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 97.32 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 97.31 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 97.29 | |
| PRK08172 | 82 | putative acyl carrier protein IacP; Validated | 97.27 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 97.27 | |
| COG0236 | 80 | AcpP Acyl carrier protein [Lipid metabolism / Seco | 97.23 |
| >KOG1202|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-253 Score=2208.28 Aligned_cols=1301 Identities=45% Similarity=0.765 Sum_probs=1191.7
Q ss_pred eeeeccCCCCceeEeeccccCCCCcccccccchh-hHH----HHHHHHHHHHHHHcCCCCccCCEEeeeeeeeeeeeeCC
Q psy1119 24 TLLKEAPRKGLVQLKNSFRSLSASPKRLASTALD-RVY----QRFQMAWETVSLMRGELYTEVPVVFENIKFMRATNVPK 98 (1392)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gh~id-r~l----~yl~l~W~t~a~~~~~~~~~~pv~fe~v~~~rat~l~~ 98 (1392)
.+.++ +.||...|+||.+ .+++.||+||.|| ||| |||+|+|+|||+++|.+|+++||+||||.|||||||+|
T Consensus 855 ~f~~g-s~s~~a~~niD~~--~edd~yL~~HtiDGRvLfPaTGymtlaW~tlak~qGldy~ktPVvfEdvv~h~ATIL~k 931 (2376)
T KOG1202|consen 855 KFPGG-SGSSAAIYNIDLS--KEDDHYLADHTIDGRVLFPATGYMTLAWKTLAKPQGLDYEKTPVVFEDVVFHRATILPK 931 (2376)
T ss_pred ccCCC-CCccceEEEccCC--ccccceeccceecceEEeccccchhHHHHHHhhhccCCcccCceeeeeeeeeeeEeecC
Confidence 34445 5569999999999 7775599999999 999 99999999999999999999999999999999999999
Q ss_pred CCeEEEEEEEEeccccEEEeeCCcEEEEEEEEccCCcccccccCCCCCCCCCCCcccccCChhhHHHHHHhcCCccCccc
Q psy1119 99 EGSVEFIVMVQKGSGNFEIVEGGAAIVTGKVYIPADVKTEMVRIPDQYKIPRTEGEAIELQSRDIYKELRLRGYHYKGLF 178 (1392)
Q Consensus 99 ~~~v~~~v~i~~~sg~Fei~~~~~~vvsG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~diYkel~lrGy~y~~~F 178 (1392)
++.|+|.|++++|||.|||||+++++||||||++++++++++++++.+ .....++|.++|+|||||||||+|+|.|
T Consensus 932 ~~vvkl~v~~~~gs~aFEi~e~~~l~~SGki~i~ed~~~~~~~l~e~~----~~~~a~eL~t~dvYKElrLRGYdYg~~F 1007 (2376)
T KOG1202|consen 932 TGVVKLEVNLFPGSGAFEICENGSLVVSGKIYIPEDPDPELLDLEESP----TSAPAEELATADVYKELRLRGYDYGGHF 1007 (2376)
T ss_pred CceEEEEEEEcCCCcceEEecCCcEEEeeeEeccCCCchhhcccccCC----CcchhhhhhHHHHHHHHHhcccccchhh
Confidence 999999999999999999999999999999999999999988887744 3344448999999999999999999999
Q ss_pred cceeeeccCCceeEEEecccchhhhhhhhheeccccCCCceecccceeeEEEcchhhHhhhhccCCCCCeeeEEEecccC
Q psy1119 179 RSLNVADGAGTQGKIRWHNNWVAFMDNMLQLQILQYDTRGLFVPTSIQKLVINVSDHVNLLSTLDEETPEYPVFVYKEVE 258 (1392)
Q Consensus 179 ~~i~~~~~~g~~g~i~W~~nWv~f~d~mlQ~~il~~~~~~l~~Pt~i~~~~i~p~~h~~~~~~~~~~~~~~~v~~~~~~~ 258 (1392)
|||.++++.|..|+++|.+|||+|||+||||+||+.+.|+|||||||+++.|||.+|.+++.+++ +++++.|++++
T Consensus 1008 qGI~~s~~s~~tG~L~W~dNWvsFmDtmLQ~siLs~~~~~LylPTrv~~~~IdP~kH~e~~~~~~-~~~qve~rw~~--- 1083 (2376)
T KOG1202|consen 1008 QGILESDLSGDTGRLQWKDNWVSFMDTMLQFSILSSAKRELYLPTRVERAHIDPAKHLELLYTLQ-DKAQVEVRWLR--- 1083 (2376)
T ss_pred hhhhhhccccccceEEEeccHHHHHHHHHHHHHHhhcccceecccceeeeeeChHHHHHHHHhhc-chheEEeeeee---
Confidence 99999999999999999999999999999999999999999999999999999999999999885 56678999998
Q ss_pred cEEeccEEEeceeeeccCCCCCCCC-CeeeeEEeeeCc----------------------------cccc--C-------
Q psy1119 259 VIKSGGVEIRGLKASAIPRKKPLGE-PVLEKYKFIQNE----------------------------GLKV--K------- 300 (1392)
Q Consensus 259 ~~~~ggvei~gl~~~~~~rr~~~~~-p~le~~~Fvp~~----------------------------~~~~--~------- 300 (1392)
+++||||||+|||+..++||++.|. |.||||+||||. ..|+ |
T Consensus 1084 v~~agGVei~~l~t~s~~RR~~~q~~p~lEk~~F~Ph~~~~~lse~qe~~~~k~L~~aiQ~ii~~s~~k~~~~gv~la~~ 1163 (2376)
T KOG1202|consen 1084 VTKAGGVEISGLKTESAQRRQQEQQPPILEKYCFVPHTEHGCLSEQQEKQLLKALVVAIQTIIENSGLKVKLKGVELAQI 1163 (2376)
T ss_pred eEEeccEEecccchhhhhccccccCCCceeeEEeeccccccccchHHHHHHHHHHHHHHHHHhhhccceeeecceeccCc
Confidence 9999999999999999999999886 999999999997 1111 1
Q ss_pred --------------------------------------------------------------------------------
Q psy1119 301 -------------------------------------------------------------------------------- 300 (1392)
Q Consensus 301 -------------------------------------------------------------------------------- 300 (1392)
T Consensus 1164 ~~~~~~lsa~~~lqlie~dpll~GD~av~ns~~~~~t~~~vl~~~gi~~t~~dl~~~~~E~~~h~v~~~d~l~~d~~~~l 1243 (2376)
T KOG1202|consen 1164 RRLPDLLSAACLLQLIEEDPLLSGDTAVENSPSNEMTVVEVLAGHGIRYTAKDLEAAQVEQQCHFVAQADLLVCDPAKAL 1243 (2376)
T ss_pred cCcHHHHHHHHHHhhcccCcccccceeEeeCCcchHhHHHHHhcCCcEEEEeccchhHHHHhhhhhhccCeEecChHHHH
Confidence
Q ss_pred ----------------------------------------------------CCCCCCCeEeecChhccccHHHHHHHHh
Q psy1119 301 ----------------------------------------------------SPVKISPLVIKVSGVDFHWIPILQKALA 328 (1392)
Q Consensus 301 ----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (1392)
..+.++|++..+++++|+|++.||..+.
T Consensus 1244 e~~~~slre~GFLll~e~~~~~~~~G~~~l~e~~lv~~~es~~g~~l~l~Rr~s~~~s~~~~~~~~k~F~Wve~Lk~~la 1323 (2376)
T KOG1202|consen 1244 ENCVASLREGGFLLLEELLSTYPQYGQAILSEFRLVGVKESFYGSTLVLVRRPSPQDSPIFLVVDDKSFNWVESLKGILA 1323 (2376)
T ss_pred HHHHHHHhcCCeEEEEhhccCCcchhHHHhhheeeEEeecccCCceEEEEecCCCCCCceEEeccccceehHHHHHHHHh
Confidence 1234679999999999999999999887
Q ss_pred hcccCCCceEEEEcCCCCchhHhHHHHHHhhhcCCCceEEEEEcCCCCCCCCCChhHHHHHhhcCceEEEEecCccccee
Q psy1119 329 AEETSTKQKIILLSQLEPLSGIIGFFNCIRKETGGERTRCFEILDKNAPPFNPEDPFYKVQVEKDLAVNILRNGQWGTYR 408 (1392)
Q Consensus 329 ~~~~~~~~~lw~~~~~~~~~~~~Gl~r~lr~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~g~~~~~~ 408 (1392)
+.. ..+.+||++++++.+|++||++|+++|+++ ..|++++.|.+.|.|++.+.+|+.|+.+|++.||||||.||+||
T Consensus 1324 ~~~--~ek~v~lva~~~~~~G~vGL~~Clk~E~gg-~~R~~~~~d~s~p~~~l~~~~~~k~le~DLv~NvyrdGaWGs~R 1400 (2376)
T KOG1202|consen 1324 DAD--SEKPVWLVAQGCANSGAVGLMNCLKRENGG-TLRLVLLSDLSVPEFSLGSAEYQKQLEKDLVMNVYRDGAWGSFR 1400 (2376)
T ss_pred hhh--ccCcEEEEecCCcccCcchHhhHhhhcCCC-eEEEEEeecCCCCcccCCCHHHHHHHHhhhhhhhhhcCccccee
Confidence 764 248999999999999999999999999998 69999999988999999999999999999999999999999999
Q ss_pred ecccC-cccccccCceeEeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhh
Q psy1119 409 HSILQ-PIKRVMTDHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIES 487 (1392)
Q Consensus 409 ~~~~~-~~~~~~~~~~~l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~ 487 (1392)
|+.+. +....+.+|+|++..++||+++|+|++.|.....+ ..++.-+|.|+|++|||||+|+++|+++++++||
T Consensus 1401 Hl~le~~~~~~~~ehAfvntLtrGDlsSlrWies~~~~a~~-----~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG 1475 (2376)
T KOG1202|consen 1401 HLKLEEDKPELPVEHAFVNTLTRGDLSSLRWIESPLRHAQP-----TCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPG 1475 (2376)
T ss_pred eeEecccCCCcchHHHHHHHhhhccccceeeeecchhhcCC-----CCCCCceeEEEeccccHHHHHHhcCCCCcccCCC
Confidence 99988 44566899999999999999999999999864221 4678899999999999999999999999999999
Q ss_pred hccccccccceeeEEEEeeCCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCC
Q psy1119 488 RRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGE 567 (1392)
Q Consensus 488 ~~~~~p~~lG~E~sGvV~~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~Ge 567 (1392)
....++|+||+||+|+.. .|.||||+.+..++|+.|.++.+++|.+|.+|++|||+++||+|+||||||+.++++++||
T Consensus 1476 ~~a~qdclLGmEFsGRd~-~GrRvM~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGe 1554 (2376)
T KOG1202|consen 1476 DLASQDCLLGMEFSGRDA-SGRRVMGMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGE 1554 (2376)
T ss_pred ccchhhheeceeeccccC-CCcEEEEeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCc
Confidence 999999999999999998 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCc
Q psy1119 568 SILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLA 647 (1392)
Q Consensus 568 tVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~ 647 (1392)
+||||+|+||||||||.+|.+.||+||+||+|.|||+||+++||++...++.||||++|++.|+..|+|+|||+|+|+++
T Consensus 1555 kiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLa 1634 (2376)
T KOG1202|consen 1555 KILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLA 1634 (2376)
T ss_pred EEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCccee
Q psy1119 648 EEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRT 727 (1392)
Q Consensus 648 ~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~ 727 (1392)
.|.+++++|||+.+|||++||++|++.+++++|..|.||+||||+.+++++....+.+.+...++.+.+++|.++|++++
T Consensus 1635 eEkLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~tt 1714 (2376)
T KOG1202|consen 1635 EEKLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTT 1714 (2376)
T ss_pred HHHHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccc
Confidence 99999999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred eeccccHHHHHHHHHcCCccceEEEEecCCCCccccCCcc-cccccCCccccCCCCeEEEEcCcchHHHHHHHHHHHhCC
Q psy1119 728 IFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKV-KQLLAVPRYYADSNKSYIICGGLGGFGLELADWLVLRGA 806 (1392)
Q Consensus 728 vf~l~ev~eA~~~l~~g~~~GKvVI~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ylItGG~gGiG~~lA~~La~~GA 806 (1392)
+|+-.++++|||+|++|||+||||++++.++.. ....|. +.+.++|+.+|+|.++|+|+||+||+|+++|+||+.|||
T Consensus 1715 vF~~~qvE~AFRfMasGKHIGKVvikvr~eE~~-k~~~pk~r~i~AI~rt~~hpeksYii~GGLGGFGLELaqWLi~RGa 1793 (2376)
T KOG1202|consen 1715 VFHGQQVEDAFRFMASGKHIGKVVIKVRAEEPA-KAKGPKPRLISAIPRTYCHPEKSYIIVGGLGGFGLELAQWLIQRGA 1793 (2376)
T ss_pred cccHHHHHHHHHHHhccCccceEEEEEcccccc-cccCCchhhHhhcchhhcCccceEEEeccccchhHHHHHHHHhcCc
Confidence 999999999999999999999999999887765 333343 456789999999999999999999999999999999999
Q ss_pred ceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCccEEEECcccCCCccccCCCHHHHH
Q psy1119 807 RKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFN 886 (1392)
Q Consensus 807 r~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~ 886 (1392)
|++|++||||.++.++..+++.|+++|++|.+.+.||++.++.+.+++++.+++||+||||.|+|++|+.|+|++++.|+
T Consensus 1794 r~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk 1873 (2376)
T KOG1202|consen 1794 RKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFK 1873 (2376)
T ss_pred eEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhcccccchhhHHHHHHhhhhcccChhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHHHHHHHHHcCCCeEEEEccccCccccc
Q psy1119 887 ASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGAVGEVGLV 966 (1392)
Q Consensus 887 ~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~la~~r~~~Glp~~ai~~g~~~~~G~~ 966 (1392)
++-+||+.||.||+++++..|+.+++||+|||++|.+||.||+||+.||++|+++|+.||.+|+|+++|+||++||+|+.
T Consensus 1874 ~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQtNYG~aNS~MERiceqRr~~GfPG~AiQWGAIGDvGli 1953 (2376)
T KOG1202|consen 1874 DVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQTNYGLANSAMERICEQRRHEGFPGTAIQWGAIGDVGLI 1953 (2376)
T ss_pred hhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcccccchhhHHHHHHHHHhhhcCCCcceeeeecccceeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhHHHHHcCccccchhhhHHHHHHHHccCCCeEEehhhhhhhc-CCCCcchHHHHHHHHhCCCCCcccCcCcchh
Q psy1119 967 ADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKKA-GSGGATNIVDAVINILGLRDLKTVSLHSTLA 1045 (1392)
Q Consensus 967 ~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~a~~l~~~~~~~i~~~~~l~ 1045 (1392)
-++++.+ +...+|++||++.+||+.+|.||++++|++++|++++++. +..+...|.+.+|+|||+.|...++.+.+|+
T Consensus 1954 lEnmgdN-dTvvgGTLPQRM~SCLetlDlFL~qpHpvvsS~v~AEk~~~d~~~~~dLiatiA~IlGlrD~~~vn~~asLa 2032 (2376)
T KOG1202|consen 1954 LENMGDN-DTVVGGTLPQRMPSCLETLDLFLQQPHPVVSSFVVAEKRKADQDSGRDLIATIAHILGLRDLKAVNDDASLA 2032 (2376)
T ss_pred eeecCCC-CceeccccchhHHHHHHHHHHHhcCCchHHHHHHHHHhhcccccccccHHHHHHHHhcchhHhhccCCCchh
Confidence 9988776 6788999999999999999999999999999999999864 3455678999999999999999999999999
Q ss_pred hcCcchhhHHHHHHHHHHHhCCccChhhhccCCHHHHHHHHhcccCCCC-CCCccccccCCcccccccCCCChhhHHHHH
Q psy1119 1046 ELGMDSMMAVEIKQTLEREFEVFLTPQDIRGLTFAKLQDIAVSFENDDK-SKPVSTEASGGQVTALSVEDIPDVGIQYLM 1124 (1392)
Q Consensus 1046 ~lG~DSL~avel~~~l~~~~~~~l~~~~i~~~ti~~La~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1124 (1392)
|||+||||.+|+++.|+|+|++.|++++|+.+|+.+|.++..+...... ..+.+.+. .......+..+
T Consensus 2033 DLGlDSLMsvEikQtLER~~dlVLS~qEiRqLT~~kLqql~~~a~~~~~aa~~~~ke~-----------~~~~~qtql~~ 2101 (2376)
T KOG1202|consen 2033 DLGLDSLMSVEIKQTLEREFDLVLSAQEIRQLTLRKLQQLDSKADEAPEAACPTPKED-----------GLAQQQTQLVF 2101 (2376)
T ss_pred hccchhhhhHHHHHHHhhhhceeeeHHHHHHHHHHHHHHhhccCCCCccccCCCCchh-----------hHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988654332211 11211111 01111223333
Q ss_pred HhhccccccCCccc--ccCCccCCCCccccCCCCCceeEeecCCCccccccHHHHhhcCCceEEEecCCCCCCCCHHHHH
Q psy1119 1125 RTIGDEILANKPVI--RLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTNPPDTIPEMA 1202 (1392)
Q Consensus 1125 ~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~~e~~~~sieelA 1202 (1392)
..+. .+++-.+ ++++..+ ..+|+|++||++|.+..+.+||++|..|.|++|++...|.+|||.+|
T Consensus 2102 ~~~~---v~~e~~~~l~~ka~~s----------e~~~~Ffv~pIEG~tt~l~~la~rle~PaYglQ~T~~vP~dSies~A 2168 (2376)
T KOG1202|consen 2102 RSLL---VNPEGPVLLRLKAVQS----------EEPPLFFVHPIEGFTTALESLASRLEIPAYGLQCTEAVPLDSIESLA 2168 (2376)
T ss_pred hhhc---CCccccHHHhhhhhcc----------cCCceEEEeccccchHHHHHHHhhcCCcchhhhccccCCcchHHHHH
Confidence 2221 2333223 3333222 34899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCCCCcEEEEeechhHHHHHHHHHHHHHcCCccEEEEEeCCCCCC------------------------
Q psy1119 1203 DSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKCHLYLVDSAPDYV------------------------ 1258 (1392)
Q Consensus 1203 ~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v~LvLiD~~p~~~------------------------ 1258 (1392)
++|+++||. +||.|||+|+|||||+++|||||.+||++..+..|+|+|++|.+.
T Consensus 2169 ~~yirqirk--vQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspty~~~Y~~~yr~~~~~g~~~~~es~~l 2246 (2376)
T KOG1202|consen 2169 AYYIRQIRK--VQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPTYVLAYTQSYRAKLTDGCENEAESEAL 2246 (2376)
T ss_pred HHHHHHHHh--cCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchHHHHHHHHHHHHHcCCCcCchhHHHHH
Confidence 999999995 669999999999999999999999999999888999999999653
Q ss_pred ---------------ccccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHHHHHHHhhccccCCCCCcccceEEEEe
Q psy1119 1259 ---------------LTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLR 1323 (1392)
Q Consensus 1259 ---------------~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~y~~~~~~~~~~pi~l~~ 1323 (1392)
...+...+.|+++++.+.+.+......+++.+++.+..|+.++.++++|+|.. ++.++|+|++
T Consensus 2247 ~~f~~~~advdy~~~~~~Ll~~~~~~~rv~k~vd~~~~~~~q~~eti~~aa~~f~~Kl~lae~Ykp~~--k~~~~v~Lir 2324 (2376)
T KOG1202|consen 2247 CYFGQQFADVDYNRLLELLLPLPGWEERVAKAVDLIIKSHQQDRETIKFAARSFYYKLLLAEQYKPKA--KLHGNVTLIR 2324 (2376)
T ss_pred HHHHHHHhcccHHHHHHHHhcCCChHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHhhhccCchh--hcCCcEEEEE
Confidence 33455678999999999999887777899999999999999999999999986 8999999999
Q ss_pred eCCCCCCChhhcCcccccCCCeEEEEEccCccccccChHHHHHHHhhhccc
Q psy1119 1324 PTEQALPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDSTD 1374 (1392)
Q Consensus 1324 a~~~~~~~~~~~~W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~~~L 1374 (1392)
+++......+||+.+++|++++++|.++|||.++++......+..+++..+
T Consensus 2325 a~~~~A~l~eDY~l~evc~~~vevh~veGdHrTfle~ssl~tie~ilr~~~ 2375 (2376)
T KOG1202|consen 2325 AKTGGAYLGEDYGLKEVCDGKVEVHVVEGDHRTFLEGSSLETIESILRSSL 2375 (2376)
T ss_pred ecCCCceeccccChhhhccCceeEEEEecccccccCCcchHHHHHHHHhhc
Confidence 998876688999999999999999999999999997777777776666654
|
|
| >KOG1197|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-43 Score=364.32 Aligned_cols=315 Identities=22% Similarity=0.271 Sum_probs=274.4
Q ss_pred eeEeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEE
Q psy1119 423 AYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSG 502 (1392)
Q Consensus 423 ~~l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sG 502 (1392)
.-+.+...|..+.++|++.|.|. |.++|+.||-+||||||.|++.+.|.+.+.. .|.++|+|.+|
T Consensus 10 k~i~v~e~Ggydvlk~ed~pv~~--------papgel~iknka~GlNfid~y~RkGlY~~~p-------lPytpGmEaaG 74 (336)
T KOG1197|consen 10 KCIVVTEFGGYDVLKLEDRPVPP--------PAPGELTIKNKACGLNFIDLYFRKGLYDPAP-------LPYTPGMEAAG 74 (336)
T ss_pred eEEEEeccCCcceEEEeeecCCC--------CCCCceEEeehhcCccHHHHHHhccccCCCC-------CCcCCCcccce
Confidence 45677889999999999999986 6899999999999999999999999984332 37899999999
Q ss_pred EEe---------eCCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEc
Q psy1119 503 RLR---------DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHA 573 (1392)
Q Consensus 503 vV~---------~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~g 573 (1392)
+|+ ++||||+-+.+.|.|+++..+|...++++|+.+++++||++.+-++|||.-+++..++++|++||+|.
T Consensus 75 vVvAvG~gvtdrkvGDrVayl~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvha 154 (336)
T KOG1197|consen 75 VVVAVGEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHA 154 (336)
T ss_pred EEEEecCCccccccccEEEEeccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEe
Confidence 987 57889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHH
Q psy1119 574 GSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQA 653 (1392)
Q Consensus 574 a~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~ 653 (1392)
|+||||+++.|++++.|+.+++|+++.+|++.+++ -|++|.++++.+++.+++.+.|+|+|||+++|++|.+.+..
T Consensus 155 AAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake----nG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~ 230 (336)
T KOG1197|consen 155 AAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE----NGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAK 230 (336)
T ss_pred ccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh----cCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHH
Confidence 99999999999999999999999999999999987 58999999999999999999999999999999999999999
Q ss_pred HHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeecccc
Q psy1119 654 SVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDK 733 (1392)
Q Consensus 654 s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~e 733 (1392)
++.||++.|.+|.+|..........-..+-.+++.+..-.+..+... ++.......++..++.+|.+++.+.++||+++
T Consensus 231 sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g-~~el~~~v~rl~alvnsg~lk~~I~~~ypls~ 309 (336)
T KOG1197|consen 231 SLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDG-EVELVSYVARLFALVNSGHLKIHIDHVYPLSK 309 (336)
T ss_pred HHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCC-HHHHHHHHHHHHHHhhcCccceeeeeecchHH
Confidence 99999999999999986544332211122234444333222223333 33344467777788999999999999999999
Q ss_pred HHHHHHHHHcCCccceEEEEecCC
Q psy1119 734 VEEAFRYMAAGKHIGKVIIKIRDE 757 (1392)
Q Consensus 734 v~eA~~~l~~g~~~GKvVI~~~~~ 757 (1392)
+.+|...+++.+..||+++.+.++
T Consensus 310 vadA~~diesrktvGkvlLlp~~~ 333 (336)
T KOG1197|consen 310 VADAHADIESRKTVGKVLLLPGPE 333 (336)
T ss_pred HHHHHHHHHhhhccceEEEeCCcc
Confidence 999999999999999999988764
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=396.63 Aligned_cols=309 Identities=24% Similarity=0.381 Sum_probs=264.4
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
+...+.|+++.|++.+.|.|. |+++||+|||+|+||||.|++.+.|..++. ...|.++|.|++|+|
T Consensus 4 ~~~~~~g~~~~l~~~e~~~P~--------p~~geVlVrV~a~gvN~~D~~~r~G~~~~~------~~~P~i~G~d~aG~V 69 (326)
T COG0604 4 VVVEEFGGPEVLKVVEVPEPE--------PGPGEVLVRVKAAGVNPIDVLVRQGLAPPV------RPLPFIPGSEAAGVV 69 (326)
T ss_pred EEEeccCCCceeEEEecCCCC--------CCCCeEEEEEEEeecChHHHHhccCCCCCC------CCCCCcccceeEEEE
Confidence 445667888779999999986 699999999999999999999999973221 124789999999999
Q ss_pred ee---------CCCeEEEee---cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEE
Q psy1119 505 RD---------SGKRVMGLT---SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIH 572 (1392)
Q Consensus 505 ~~---------vGdrV~gl~---~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ 572 (1392)
++ +||||+.+. ..|+||||+.+|+..++++|+++|+++||++|++++|||++|...+++++|++||||
T Consensus 70 ~avG~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~ 149 (326)
T COG0604 70 VAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVH 149 (326)
T ss_pred EEeCCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEe
Confidence 74 789999985 569999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHH
Q psy1119 573 AGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQ 652 (1392)
Q Consensus 573 ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~ 652 (1392)
||+||||.++||+|+++|+.+++++++++|.+++++ +++++++++++.+|.+.+++.|+|+|||+|+|+++++.+.
T Consensus 150 gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~----lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~ 225 (326)
T COG0604 150 GAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKE----LGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFA 225 (326)
T ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHh----cCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHH
Confidence 999999999999999999888888888899997776 8999999999999999999999999999999999999999
Q ss_pred HHHhcccCCeEEEEEccccc-ccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeecc
Q psy1119 653 ASVRCLAQGGRFLEIGKFDL-ANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPE 731 (1392)
Q Consensus 653 ~s~~~La~~Gr~v~iG~~~~-~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l 731 (1392)
.++++|+++|+++.+|.... .........++.+.+...++..... .++...+..+.+.+++++|.++|.+..+||+
T Consensus 226 ~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l 302 (326)
T COG0604 226 ASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSR---DPEALAEALAELFDLLASGKLKPVIDRVYPL 302 (326)
T ss_pred HHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceec---chHHHHHHHHHHHHHHHcCCCcceeccEech
Confidence 99999999999999998652 2111112345567777777765433 2255667778888999999999999999999
Q ss_pred ccHHHHHHHHHc-CCccceEEEEe
Q psy1119 732 DKVEEAFRYMAA-GKHIGKVIIKI 754 (1392)
Q Consensus 732 ~ev~eA~~~l~~-g~~~GKvVI~~ 754 (1392)
+|..+|..+... +++.||+||++
T Consensus 303 ~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 303 AEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred hhhHHHHHHHHcccCCcceEEEeC
Confidence 995544443333 58999999874
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=359.75 Aligned_cols=293 Identities=21% Similarity=0.332 Sum_probs=249.2
Q ss_pred eeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
....++.+ +++.+.+.|. |+++||+|+|.|||+|.+|++.+.|.++... .|+++|||.+|+|+
T Consensus 8 ~~~~~~~p--l~i~e~~~p~--------p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~-------~P~ipGHEivG~V~ 70 (339)
T COG1064 8 VLKKFGQP--LEIEEVPVPE--------PGPGEVLIKVEACGVCHTDLHVAKGDWPVPK-------LPLIPGHEIVGTVV 70 (339)
T ss_pred EEccCCCC--ceEEeccCCC--------CCCCeEEEEEEEEeecchhhhhhcCCCCCCC-------CCccCCcceEEEEE
Confidence 34445555 8889998885 7999999999999999999999999987653 48999999999997
Q ss_pred e---------CCCeEE----------------------------EeecCCcccceEEecccceEEcCCCCCHhhHhhhhH
Q psy1119 506 D---------SGKRVM----------------------------GLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPC 548 (1392)
Q Consensus 506 ~---------vGdrV~----------------------------gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~ 548 (1392)
+ +||||- |+..+|+||||+++|+.+++++|+++++++||.+.|
T Consensus 71 ~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllC 150 (339)
T COG1064 71 EVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLC 150 (339)
T ss_pred EecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhc
Confidence 4 567762 222349999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHH
Q psy1119 549 VYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQ 628 (1392)
Q Consensus 549 ~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~ 628 (1392)
++.|+|.+|.. ++++||++|+|+|+ ||+|.+|+|+|+++||+|++.+.+++|++++++ +++++++|+++.++.+
T Consensus 151 aGiT~y~alk~-~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~----lGAd~~i~~~~~~~~~ 224 (339)
T COG1064 151 AGITTYRALKK-ANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKK----LGADHVINSSDSDALE 224 (339)
T ss_pred CeeeEeeehhh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH----hCCcEEEEcCCchhhH
Confidence 99999999955 89999999999966 799999999999999999999999999999987 8999999988887777
Q ss_pred HHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccc-cccccCCCcEEEEEechhhhhhCHHHHHH
Q psy1119 629 LVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNML-GMEVFMRETSFHGVMLDNFFFAEQEWKMS 707 (1392)
Q Consensus 629 ~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l-~~~~~~k~~s~~g~~~~~~~~~~~~~~~~ 707 (1392)
.+.+. +|+++|+++...+..++++|+++|+++.+|.........+ ...+..+++++.|+..... .
T Consensus 225 ~~~~~-----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~---------~ 290 (339)
T COG1064 225 AVKEI-----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTR---------A 290 (339)
T ss_pred HhHhh-----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCH---------H
Confidence 77653 9999999997789999999999999999998742222222 2346678999999876652 1
Q ss_pred HHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEec
Q psy1119 708 LQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 708 ~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
-.+.+.++..+|+++|.+.+.++++|+++||+.|.+|+..|++||++.
T Consensus 291 d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 291 DLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred HHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 123444678899999988788999999999999999999999998764
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=317.20 Aligned_cols=180 Identities=37% Similarity=0.651 Sum_probs=153.2
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g 860 (1392)
++||||||+||||+.+|+||+++|+++|++++|++.........++++++.|++|.+++||++|+++++++++.+ +.++
T Consensus 1 gtylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 1 GTYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 589999999999999999999999999999999965555666789999999999999999999999999999998 5679
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHH
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMER 940 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~ 940 (1392)
||+||||+||+..|+++.++|.++|+.+++||+.|+++|++++.. .+++|||+|||+++++|++||++|++||+|||+
T Consensus 81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~--~~l~~~i~~SSis~~~G~~gq~~YaaAN~~lda 158 (181)
T PF08659_consen 81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN--RPLDFFILFSSISSLLGGPGQSAYAAANAFLDA 158 (181)
T ss_dssp -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT--TTTSEEEEEEEHHHHTT-TTBHHHHHHHHHHHH
T ss_pred CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc--CCCCeEEEECChhHhccCcchHhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999876 488999999999999999999999999999999
Q ss_pred HHHHHHHcCCCeEEEEccccCcc
Q psy1119 941 ICEARRAEGLPGLAVEWGAVGEV 963 (1392)
Q Consensus 941 la~~r~~~Glp~~ai~~g~~~~~ 963 (1392)
|+++|++.|+|+.+|+||+|.++
T Consensus 159 ~a~~~~~~g~~~~sI~wg~W~~~ 181 (181)
T PF08659_consen 159 LARQRRSRGLPAVSINWGAWDGV 181 (181)
T ss_dssp HHHHHHHTTSEEEEEEE-EBSS-
T ss_pred HHHHHHhCCCCEEEEEccccCCC
Confidence 99999999999999999999864
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=330.46 Aligned_cols=301 Identities=17% Similarity=0.225 Sum_probs=247.3
Q ss_pred ccCCCC---CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 428 LVRGDM---SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 428 ~~~G~l---~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
..+|.+ +.+++.+.|.|. ++++||+|+|.++|+|+.|++...|.++.. ...|.++|||++|+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~p~--------~~~~evlv~v~~~gi~~~d~~~~~g~~~~~------~~~p~v~G~e~~G~V 72 (324)
T cd08291 7 EEYGKPLEVKELSLPEPEVPE--------PGPGEVLIKVEAAPINPSDLGFLKGQYGST------KALPVPPGFEGSGTV 72 (324)
T ss_pred eecCCCccccEEEecccCCCC--------CCCCeEEEEEEEccCCHHHHHHhcCcCCCC------CCCCcCCCcceEEEE
Confidence 345544 567777877765 688999999999999999999998876432 123679999999998
Q ss_pred ee----------CCCeEEEeec-CCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEE-
Q psy1119 505 RD----------SGKRVMGLTS-GRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIH- 572 (1392)
Q Consensus 505 ~~----------vGdrV~gl~~-~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~- 572 (1392)
.+ +||+|+++.. .|+|++|+.+++..++++|+++++++||+++++++|||.+ ...+++ +|++++||
T Consensus 73 ~~vG~~v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~~~vlv~~ 150 (324)
T cd08291 73 VAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGM-LETARE-EGAKAVVHT 150 (324)
T ss_pred EEECCCccccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHH-HHhhcc-CCCcEEEEc
Confidence 63 6888887643 2899999999999999999999999999999999999744 455655 67778787
Q ss_pred cCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHH
Q psy1119 573 AGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQ 652 (1392)
Q Consensus 573 ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~ 652 (1392)
+|+|++|++++|+|+++|++|++++++++|++++++ +++++++++++.++.+.+++.++++|+|+|||++++....
T Consensus 151 ~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~ 226 (324)
T cd08291 151 AAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK----IGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTG 226 (324)
T ss_pred cCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHH
Confidence 899999999999999999999999999999999976 6889999999889999999999989999999999988888
Q ss_pred HHHhcccCCeEEEEEcccccccCccc-cccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeecc
Q psy1119 653 ASVRCLAQGGRFLEIGKFDLANNNML-GMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPE 731 (1392)
Q Consensus 653 ~s~~~La~~Gr~v~iG~~~~~~~~~l-~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l 731 (1392)
..+++++++|+++.+|.........+ .+..+.+++++.++.+..+.... .....+.+.+++. |.+++.++++|++
T Consensus 227 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~i~~~~~l 302 (324)
T cd08291 227 QILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKL---GPEVVKKLKKLVK-TELKTTFASRYPL 302 (324)
T ss_pred HHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhccc---CHHHHHHHHHHHh-CccccceeeEEcH
Confidence 89999999999999996543322112 33457789999998766543221 1233445556666 8899999999999
Q ss_pred ccHHHHHHHHHcCCccceEEE
Q psy1119 732 DKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 732 ~ev~eA~~~l~~g~~~GKvVI 752 (1392)
+|+.+||+.+.++++.||+||
T Consensus 303 ~~~~~a~~~~~~~~~~Gkvv~ 323 (324)
T cd08291 303 ALTLEAIAFYSKNMSTGKKLL 323 (324)
T ss_pred HHHHHHHHHHHhCCCCCeEEe
Confidence 999999999999999999886
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=329.39 Aligned_cols=295 Identities=19% Similarity=0.217 Sum_probs=238.8
Q ss_pred CCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe----
Q psy1119 430 RGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR---- 505 (1392)
Q Consensus 430 ~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~---- 505 (1392)
...++.|++.+.|.|. |++|||+|||.|+|+|+.|. .|.++.. ..|.++|.|++|+|.
T Consensus 13 ~~~~~~l~~~~~~~p~--------~~~~evlv~v~a~~~n~~~~---~g~~~~~-------~~~~i~G~~~~g~v~~~~~ 74 (325)
T TIGR02825 13 YPTDSDFELKTVELPP--------LNNGEVLLEALFLSVDPYMR---VAAKRLK-------EGDTMMGQQVARVVESKNV 74 (325)
T ss_pred CCCCCceEEEeccCCC--------CCCCcEEEEEEEEecCHHHh---cccCcCC-------CCCcEecceEEEEEEeCCC
Confidence 3445778888888875 68999999999999999654 4533211 125789999999997
Q ss_pred --eCCCeEEEeecCCcccceEEecccceEEc----CCCCCHhhH-hhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Q psy1119 506 --DSGKRVMGLTSGRSLANCCETDVEMAWEI----PDQWTLEDA-ATVPCVYATAVYAMFICGQMQKGESILIHAGSGGV 578 (1392)
Q Consensus 506 --~vGdrV~gl~~~g~~a~~v~~~~~~~~~i----Pd~ls~e~A-A~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgV 578 (1392)
++||||+++ ++|++|+.++..+++++ |+++++++| |+++++++|||+++...+++++|++||||||+|++
T Consensus 75 ~~~~GdrV~~~---~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~v 151 (325)
T TIGR02825 75 ALPKGTIVLAS---PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAV 151 (325)
T ss_pred CCCCCCEEEEe---cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHH
Confidence 579999986 36999999999998887 999999998 68999999999999899999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCc-cHHHHHHHHcCCCcceEEEecCchhHHHHHHhc
Q psy1119 579 GQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDT-SFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRC 657 (1392)
Q Consensus 579 G~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~-~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~ 657 (1392)
|++++|+|+..|++|++++++++|++++++ +|+++++++++. ++.+.+...+ ++|+|+|||+++++.+..+++|
T Consensus 152 G~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~----lGa~~vi~~~~~~~~~~~~~~~~-~~gvdvv~d~~G~~~~~~~~~~ 226 (325)
T TIGR02825 152 GSVVGQIAKLKGCKVVGAAGSDEKVAYLKK----LGFDVAFNYKTVKSLEETLKKAS-PDGYDCYFDNVGGEFSNTVIGQ 226 (325)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCCEEEeccccccHHHHHHHhC-CCCeEEEEECCCHHHHHHHHHH
Confidence 999999999999999999999999999975 678999998874 5666666655 4699999999999888999999
Q ss_pred ccCCeEEEEEcccccccC----c--cccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeecc
Q psy1119 658 LAQGGRFLEIGKFDLANN----N--MLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPE 731 (1392)
Q Consensus 658 La~~Gr~v~iG~~~~~~~----~--~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l 731 (1392)
++++|+++.+|....... . ......+.+++++.++....+ .++.....++.+.+++++|++++.+..+|++
T Consensus 227 l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l 303 (325)
T TIGR02825 227 MKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRW---QGEVRQKALKELLKWVLEGKIQYKEYVIEGF 303 (325)
T ss_pred hCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhh---hhhhhHHHHHHHHHHHHCCCcccceeccccH
Confidence 999999999986432111 1 111223456777777654321 1222334556677889999999987788999
Q ss_pred ccHHHHHHHHHcCCccceEEEE
Q psy1119 732 DKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 732 ~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
+++.+||+.+.+++..||+|++
T Consensus 304 ~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 304 ENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHHHHHHHhcCCCCCeEEeC
Confidence 9999999999999999999863
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-33 Score=326.65 Aligned_cols=305 Identities=15% Similarity=0.170 Sum_probs=257.0
Q ss_pred cCCCC-CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--
Q psy1119 429 VRGDM-SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-- 505 (1392)
Q Consensus 429 ~~G~l-~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-- 505 (1392)
.+|.+ ..+.+.+.|.|. +.+++|+|+|.++|+|+.|++...|.++.. ...|.++|||++|+|.
T Consensus 8 ~~~~~~~~~~~~~~~~p~--------~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~------~~~p~~~G~e~~G~V~~~ 73 (324)
T cd08292 8 QFGDPADVLEIGEVPKPT--------PGAGEVLVRTTLSPIHNHDLWTIRGTYGYK------PELPAIGGSEAVGVVDAV 73 (324)
T ss_pred cCCChhHeEEEeecCCCC--------CCCCeEEEEEEEccCCHHHHHHhcCcCCCC------CCCCCCCCcceEEEEEEe
Confidence 45554 458888888875 688999999999999999999998876521 0126789999999987
Q ss_pred -------eCCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Q psy1119 506 -------DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGV 578 (1392)
Q Consensus 506 -------~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgV 578 (1392)
++||+|+++...|+|++|+.+++..++++|+++++++||++++++.|||+++ ..+++++|++||||||+|++
T Consensus 74 G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~i 152 (324)
T cd08292 74 GEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAV 152 (324)
T ss_pred CCCCCCCCCCCEEEeccCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHH
Confidence 3688999876568999999999999999999999999999999999999998 45899999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcc
Q psy1119 579 GQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCL 658 (1392)
Q Consensus 579 G~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~L 658 (1392)
|++++|+|+++|++|+++++++++++++++ ++.++++++++.++.+.+++.++++|+|+|||+.++..+..+++|+
T Consensus 153 g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l 228 (324)
T cd08292 153 GKLVAMLAAARGINVINLVRRDAGVAELRA----LGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLL 228 (324)
T ss_pred HHHHHHHHHHCCCeEEEEecCHHHHHHHHh----cCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhh
Confidence 999999999999999999999999999976 4668999999889999999999999999999999988889999999
Q ss_pred cCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhC-HHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHH
Q psy1119 659 AQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAE-QEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEA 737 (1392)
Q Consensus 659 a~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA 737 (1392)
+++|+|+.+|..............+.++++|.++....+.... +.........+.+++.+|.+++.+.++|+++++.+|
T Consensus 229 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a 308 (324)
T cd08292 229 GEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKA 308 (324)
T ss_pred cCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHH
Confidence 9999999998642211111111245689999998876654443 555556677777889999998666788999999999
Q ss_pred HHHHHcCCccceEEE
Q psy1119 738 FRYMAAGKHIGKVII 752 (1392)
Q Consensus 738 ~~~l~~g~~~GKvVI 752 (1392)
|+.+.++.+.||+|+
T Consensus 309 ~~~~~~~~~~~kvvv 323 (324)
T cd08292 309 AAASMRPGRAGKVLL 323 (324)
T ss_pred HHHHHcCCCCceEEe
Confidence 999999889999886
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-33 Score=326.53 Aligned_cols=291 Identities=15% Similarity=0.211 Sum_probs=239.9
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe------eC
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR------DS 507 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~------~v 507 (1392)
+.+++.+.|.|. |+++||+|||+|+|||+.|.....+ + ...|.++|+|++|+|. ++
T Consensus 19 ~~l~~~~~~~p~--------~~~~evlVkv~a~~in~~~~~~~~~--~--------~~~p~v~G~e~~G~V~~~~~~~~~ 80 (329)
T cd08294 19 SDFELVEEELPP--------LKDGEVLCEALFLSVDPYMRPYSKR--L--------NEGDTMIGTQVAKVIESKNSKFPV 80 (329)
T ss_pred cceEEEecCCCC--------CCCCcEEEEEEEEecCHHHhccccc--C--------CCCCcEecceEEEEEecCCCCCCC
Confidence 789999998876 7999999999999999876542111 0 0136789999999987 47
Q ss_pred CCeEEEeecCCcccceEEeccc---ceEEcCCCCC-----HhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHH
Q psy1119 508 GKRVMGLTSGRSLANCCETDVE---MAWEIPDQWT-----LEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVG 579 (1392)
Q Consensus 508 GdrV~gl~~~g~~a~~v~~~~~---~~~~iPd~ls-----~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG 579 (1392)
||+|+++ +++++|+.+++. .++++|++++ ..++++++++++|||+++...+++++|++||||||+|++|
T Consensus 81 Gd~V~~~---~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG 157 (329)
T cd08294 81 GTIVVAS---FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVG 157 (329)
T ss_pred CCEEEee---CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHH
Confidence 9999985 478999999999 9999999998 2334578899999999998899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhccc
Q psy1119 580 QAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLA 659 (1392)
Q Consensus 580 ~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La 659 (1392)
++++|+|+++|++|++|+++++|++++++ +++++++++++.++.+.+++.++ +|+|+|||+++++.+..++++++
T Consensus 158 ~~aiqlA~~~G~~vi~~~~s~~~~~~l~~----~Ga~~vi~~~~~~~~~~v~~~~~-~gvd~vld~~g~~~~~~~~~~l~ 232 (329)
T cd08294 158 SLVGQIAKIKGCKVIGCAGSDDKVAWLKE----LGFDAVFNYKTVSLEEALKEAAP-DGIDCYFDNVGGEFSSTVLSHMN 232 (329)
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCCEEEeCCCccHHHHHHHHCC-CCcEEEEECCCHHHHHHHHHhhc
Confidence 99999999999999999999999999986 57899999999999999988876 79999999999988999999999
Q ss_pred CCeEEEEEcccccccCc------cccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeecccc
Q psy1119 660 QGGRFLEIGKFDLANNN------MLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDK 733 (1392)
Q Consensus 660 ~~Gr~v~iG~~~~~~~~------~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~e 733 (1392)
++|+++.+|........ ........+++++.++..... .......++.+.+++++|.+++.+..+|++++
T Consensus 233 ~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~ 308 (329)
T cd08294 233 DFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRW----QDRWPEALKQLLKWIKEGKLKYREHVTEGFEN 308 (329)
T ss_pred cCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhh----HHHHHHHHHHHHHHHHCCCCcCCcccccCHHH
Confidence 99999999854321111 111233456778777654321 12234456667788999999987777899999
Q ss_pred HHHHHHHHHcCCccceEEEEe
Q psy1119 734 VEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 734 v~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+.+||+.+.++++.||+|+++
T Consensus 309 ~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 309 MPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HHHHHHHHHcCCCCCeEEEeC
Confidence 999999999999999999864
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=334.35 Aligned_cols=294 Identities=19% Similarity=0.237 Sum_probs=244.3
Q ss_pred CCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee----
Q psy1119 431 GDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD---- 506 (1392)
Q Consensus 431 G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~---- 506 (1392)
|.++.+++.+.|.|. ++++||+|||.|+|||+.|++.+.|.++.. .|.++|||++|+|++
T Consensus 16 ~~~~~l~~~~~~~P~--------~~~~evlV~v~~~gi~~~D~~~~~g~~~~~--------~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 16 ADSRPLVIEEVELDP--------PGPGEVLVKIAAAGLCHSDLSVINGDRPRP--------LPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred ccCCCceEEEeecCC--------CCCCeEEEEEEEEeeCccchHhhcCCCCCC--------CCccCCccceeEEEEeCCC
Confidence 345789999988876 689999999999999999999999875421 377999999999873
Q ss_pred -----CCCeEEEeec------------------------------------------------CCcccceEEecccceEE
Q psy1119 507 -----SGKRVMGLTS------------------------------------------------GRSLANCCETDVEMAWE 533 (1392)
Q Consensus 507 -----vGdrV~gl~~------------------------------------------------~g~~a~~v~~~~~~~~~ 533 (1392)
+||||+.... .|+|++|+.+++..+++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~ 159 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVK 159 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEE
Confidence 6889875310 16899999999999999
Q ss_pred cCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCC
Q psy1119 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPF 612 (1392)
Q Consensus 534 iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~ 612 (1392)
+|+++++++||+++++++|||+++...+++++|++|||+| +|++|++++|+|+.+|+ +|++++.+++|++++++
T Consensus 160 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G-~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~---- 234 (371)
T cd08281 160 IDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVG-LGGVGLSALLGAVAAGASQVVAVDLNEDKLALARE---- 234 (371)
T ss_pred CCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH----
Confidence 9999999999999999999999998889999999999996 59999999999999999 69999999999999875
Q ss_pred CCcCceeeCCCccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCcccc-ccccCCCcEEE
Q psy1119 613 IKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFH 690 (1392)
Q Consensus 613 l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~ 690 (1392)
+++++++++.+.++.+.+++.+++ |+|+|||+++. +.+..++++++++|+++.+|.........+. ..++.+++++.
T Consensus 235 ~Ga~~~i~~~~~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~ 313 (371)
T cd08281 235 LGATATVNAGDPNAVEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLK 313 (371)
T ss_pred cCCceEeCCCchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEE
Confidence 688999999888899999999887 89999999975 6789999999999999999965321111122 24567899999
Q ss_pred EEechhhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEE
Q psy1119 691 GVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 691 g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI 752 (1392)
|+....... . .....+.+++.+|++++ +++++|+++|+++||+.+.+++..||+|+
T Consensus 314 g~~~~~~~~--~----~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 314 GSYMGSCVP--R----RDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred EEecCCCCh--H----HHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 976543211 1 12334457788999875 57899999999999999999999888764
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=326.30 Aligned_cols=301 Identities=14% Similarity=0.149 Sum_probs=234.7
Q ss_pred CCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-------
Q psy1119 433 MSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR------- 505 (1392)
Q Consensus 433 l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~------- 505 (1392)
++.+++.+.|.|.. ++++||+|||+|+|||+.|........... + ....|.++|+|++|+|.
T Consensus 20 ~~~~~~~~~~~p~~-------~~~~evlV~v~a~gin~~d~~~~~~~~~~~-~---~~~~~~~~G~e~~G~V~~vG~~v~ 88 (345)
T cd08293 20 AENFRVEECTLPDE-------LNEGQVLVRTLYLSVDPYMRCRMNEDTGTD-Y---LAPWQLSQVLDGGGVGVVEESKHQ 88 (345)
T ss_pred ccceEEEeccCCCC-------CCCCeEEEEEEEEecCHHHHhhcccccccc-c---CCCccCCCceEeeEEEEEeccCCC
Confidence 46788888888751 248999999999999999964322110000 0 01236789999999987
Q ss_pred --eCCCeEEEeecCCcccceEEecccceEEcCCCCCHhh----HhhhhHHHHHHHHHHHHhcCCCCC--CEEEEEcCCch
Q psy1119 506 --DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLED----AATVPCVYATAVYAMFICGQMQKG--ESILIHAGSGG 577 (1392)
Q Consensus 506 --~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~----AA~lp~~~~TA~~aL~~~a~l~~G--etVLI~ga~Gg 577 (1392)
++||+|+++. ++|++|++++++.++++|+++++++ +|+++++++|||+++...+++++| ++||||||+|+
T Consensus 89 ~~~~Gd~V~~~~--~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~ 166 (345)
T cd08293 89 KFAVGDIVTSFN--WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGA 166 (345)
T ss_pred CCCCCCEEEecC--CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcH
Confidence 3688998763 6899999999999999999865432 567788999999999888899987 99999999999
Q ss_pred HHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHh
Q psy1119 578 VGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVR 656 (1392)
Q Consensus 578 VG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~ 656 (1392)
+|++++|+|+++|+ +|++++++++|++++++. +|+++++++++.++.+.+++.++ +|+|+|||++++..+..+++
T Consensus 167 vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~---lGa~~vi~~~~~~~~~~i~~~~~-~gvd~vid~~g~~~~~~~~~ 242 (345)
T cd08293 167 CGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSE---LGFDAAINYKTDNVAERLRELCP-EGVDVYFDNVGGEISDTVIS 242 (345)
T ss_pred HHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh---cCCcEEEECCCCCHHHHHHHHCC-CCceEEEECCCcHHHHHHHH
Confidence 99999999999999 899999999999999874 57899999998899999998886 79999999999888899999
Q ss_pred cccCCeEEEEEcccccccC-----ccccc---c-ccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCccee
Q psy1119 657 CLAQGGRFLEIGKFDLANN-----NMLGM---E-VFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRT 727 (1392)
Q Consensus 657 ~La~~Gr~v~iG~~~~~~~-----~~l~~---~-~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~ 727 (1392)
||+++|+++.+|....... ..+.+ . .+.+++++.++.... .+......++.+.+++.+|.+++.+..
T Consensus 243 ~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~g~i~~~~~~ 318 (345)
T cd08293 243 QMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLN----YKDKFEEAIAQLSQWVKEGKLKVKETV 318 (345)
T ss_pred HhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeec----cHhHHHHHHHHHHHHHHCCCccceeEE
Confidence 9999999999985322111 01110 0 123455555543221 122233455566788999999987777
Q ss_pred eeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 728 IFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 728 vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+|+++++.+||+.+.++++.||+|+++
T Consensus 319 ~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 319 YEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred eecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 789999999999999999999999864
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=324.70 Aligned_cols=299 Identities=14% Similarity=0.203 Sum_probs=238.8
Q ss_pred CCCceEEeC---CCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccce--eeEEEEe--
Q psy1119 433 MSSLTWEQG---PVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGF--EYSGRLR-- 505 (1392)
Q Consensus 433 l~~l~~~~~---~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~--E~sGvV~-- 505 (1392)
++.+++++. +.|. + +++|||+|||.|+|+|+.|.....+..+.. ..|.++|+ |++|+|.
T Consensus 24 ~~~f~~~~~~~~~~~~-~------~~~gevlVkv~a~~inp~~~~~~~~~~~~~-------~~p~~~G~~~~~~G~v~~v 89 (348)
T PLN03154 24 ETDMEVKLGNKIELKA-P------KGSGAFLVKNLYLSCDPYMRGRMRDFHDSY-------LPPFVPGQRIEGFGVSKVV 89 (348)
T ss_pred cccEEEEeecccCCCC-C------CCCCeEEEEEEEEccCHHHHHhhhccCCCC-------CCCcCCCCeeEeeEEEEEE
Confidence 356777764 4443 1 579999999999999999875433322111 12678897 8899875
Q ss_pred -------eCCCeEEEeecCCcccceEEecccc--eEE--cCCCCCHh-hHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEc
Q psy1119 506 -------DSGKRVMGLTSGRSLANCCETDVEM--AWE--IPDQWTLE-DAATVPCVYATAVYAMFICGQMQKGESILIHA 573 (1392)
Q Consensus 506 -------~vGdrV~gl~~~g~~a~~v~~~~~~--~~~--iPd~ls~e-~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~g 573 (1392)
++||+|+++ ++|++|+.++... +++ +|++++++ +||+++++++|||+++...+++++|++|||+|
T Consensus 90 g~~v~~~~~Gd~V~~~---~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~G 166 (348)
T PLN03154 90 DSDDPNFKPGDLISGI---TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSA 166 (348)
T ss_pred ecCCCCCCCCCEEEec---CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEec
Confidence 468999875 5799999998853 544 49999997 78899999999999998889999999999999
Q ss_pred CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCC-ccHHHHHHHHcCCCcceEEEecCchhHHH
Q psy1119 574 GSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRD-TSFEQLVMKRTKGRGVDLVLNSLAEEKLQ 652 (1392)
Q Consensus 574 a~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~-~~~~~~i~~~T~g~GvDvVlds~~~~~l~ 652 (1392)
|+|+||++++|+|+++|++|++++++++|++++++. +|+++++|+++ .++.+.+++.++ +|+|+|||++++..+.
T Consensus 167 aaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~---lGa~~vi~~~~~~~~~~~i~~~~~-~gvD~v~d~vG~~~~~ 242 (348)
T PLN03154 167 ASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFDEAFNYKEEPDLDAALKRYFP-EGIDIYFDNVGGDMLD 242 (348)
T ss_pred CccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh---cCCCEEEECCCcccHHHHHHHHCC-CCcEEEEECCCHHHHH
Confidence 999999999999999999999999999999998742 67899999875 478888888876 5999999999998999
Q ss_pred HHHhcccCCeEEEEEcccccccCc----c-ccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCccee
Q psy1119 653 ASVRCLAQGGRFLEIGKFDLANNN----M-LGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRT 727 (1392)
Q Consensus 653 ~s~~~La~~Gr~v~iG~~~~~~~~----~-l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~ 727 (1392)
.++++++++|+++.+|........ . ....++.+++++.|+....+.. ......+.+.+++++|++++.+..
T Consensus 243 ~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~----~~~~~~~~~~~l~~~G~l~~~~~~ 318 (348)
T PLN03154 243 AALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLH----LFPQFLENVSRYYKQGKIVYIEDM 318 (348)
T ss_pred HHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHH----HHHHHHHHHHHHHHCCCccCceec
Confidence 999999999999999965322110 1 1124567889999886543321 122345567788999999998888
Q ss_pred eeccccHHHHHHHHHcCCccceEEEEecC
Q psy1119 728 IFPEDKVEEAFRYMAAGKHIGKVIIKIRD 756 (1392)
Q Consensus 728 vf~l~ev~eA~~~l~~g~~~GKvVI~~~~ 756 (1392)
+|+++++.+||+.+.+|+..||+||++.+
T Consensus 319 ~~~L~~~~~A~~~l~~g~~~GKvVl~~~~ 347 (348)
T PLN03154 319 SEGLESAPAALVGLFSGKNVGKQVIRVAK 347 (348)
T ss_pred ccCHHHHHHHHHHHHcCCCCceEEEEecC
Confidence 99999999999999999999999999854
|
|
| >KOG0023|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=299.24 Aligned_cols=299 Identities=20% Similarity=0.254 Sum_probs=243.7
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
+....++++.++++.+.+.|+ ++++||+|+|.|||+|.+|++.+.|.++... .|.++|||.+|+|
T Consensus 13 ~~~~~~~G~l~p~~~~~~~~~--------~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~-------~PlV~GHEiaG~V 77 (360)
T KOG0023|consen 13 WAARDPSGVLSPEVFSFPVRE--------PGENDVLVKIEYCGVCHSDLHAWKGDWGLSK-------YPLVPGHEIAGVV 77 (360)
T ss_pred EEEECCCCCCCcceeEcCCCC--------CCCCcEEEEEEEEeccchhHHHhhccCCccc-------CCccCCceeeEEE
Confidence 344556666677778888775 6999999999999999999999999987643 4889999999999
Q ss_pred eeC---------CCeE-EE-----------------------------eecC-----CcccceEEecccceEEcCCCCCH
Q psy1119 505 RDS---------GKRV-MG-----------------------------LTSG-----RSLANCCETDVEMAWEIPDQWTL 540 (1392)
Q Consensus 505 ~~v---------GdrV-~g-----------------------------l~~~-----g~~a~~v~~~~~~~~~iPd~ls~ 540 (1392)
+++ |||| ++ +..+ |+|++|+++++.++.+||+++++
T Consensus 78 vkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl 157 (360)
T KOG0023|consen 78 VKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPL 157 (360)
T ss_pred EEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCCh
Confidence 855 5554 00 0011 56999999999999999999999
Q ss_pred hhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceee
Q psy1119 541 EDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGN 620 (1392)
Q Consensus 541 e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~ 620 (1392)
++||.+.|+..|+|.+| ...++.||++|-|.|+ ||+|.+++|+|+++|.+|+++.+++.|++.+.+ .||+++.++
T Consensus 158 ~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~---~LGAd~fv~ 232 (360)
T KOG0023|consen 158 ASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIK---SLGADVFVD 232 (360)
T ss_pred hhccchhhcceEEeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHH---hcCcceeEE
Confidence 99999999999999999 5678899999999976 669999999999999999999998867766666 489999998
Q ss_pred CC-CccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhh
Q psy1119 621 SR-DTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFF 699 (1392)
Q Consensus 621 s~-~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~ 699 (1392)
+. +.+..++++..|++ ++|-|.|. +...++.++++++++|++|.+|.... ...........+.+++.|....+...
T Consensus 233 ~~~d~d~~~~~~~~~dg-~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~-~~~~~~~~lil~~~~I~GS~vG~~ke 309 (360)
T KOG0023|consen 233 STEDPDIMKAIMKTTDG-GIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK-PLKLDTFPLILGRKSIKGSIVGSRKE 309 (360)
T ss_pred ecCCHHHHHHHHHhhcC-cceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC-cccccchhhhcccEEEEeeccccHHH
Confidence 87 88899999999986 88999887 56678999999999999999997643 22222234456778899987766321
Q ss_pred hCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEecC
Q psy1119 700 AEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRD 756 (1392)
Q Consensus 700 ~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~ 756 (1392)
.+++.+....|.+++.+ ++.+++++++||+.|.+++..++.||++..
T Consensus 310 ---------t~E~Ldf~a~~~ik~~I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s~ 356 (360)
T KOG0023|consen 310 ---------TQEALDFVARGLIKSPI-ELVKLSEVNEAYERMEKGDVRYRFVVDVSK 356 (360)
T ss_pred ---------HHHHHHHHHcCCCcCce-EEEehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence 23344667778777654 667999999999999999999999998854
|
|
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=326.39 Aligned_cols=298 Identities=20% Similarity=0.208 Sum_probs=243.5
Q ss_pred eeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
....+|.+ +++.+.|.|. ++++||+|||.++|+|+.|++...|.++.. .|.++|||++|+|+
T Consensus 6 ~~~~~~~~--~~~~~~~~p~--------~~~~evlV~v~~~gi~~~D~~~~~g~~~~~--------~p~i~G~e~~G~V~ 67 (358)
T TIGR03451 6 IARSKGAP--VELETIVVPD--------PGPGEVIVDIQACGVCHTDLHYREGGINDE--------FPFLLGHEAAGVVE 67 (358)
T ss_pred EEccCCCC--CEEEEEECCC--------CCCCeEEEEEEEEeecHHHHHHhcCCcccc--------CCcccccceEEEEE
Confidence 34445543 6777888775 689999999999999999999998875421 37799999999987
Q ss_pred ---------eCCCeEEEe----------------------------------------ecCCcccceEEecccceEEcCC
Q psy1119 506 ---------DSGKRVMGL----------------------------------------TSGRSLANCCETDVEMAWEIPD 536 (1392)
Q Consensus 506 ---------~vGdrV~gl----------------------------------------~~~g~~a~~v~~~~~~~~~iPd 536 (1392)
++||+|+.. ...|+|+||+.+++..++++|+
T Consensus 68 ~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~ 147 (358)
T TIGR03451 68 AVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDP 147 (358)
T ss_pred EeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCC
Confidence 368888641 0248899999999999999999
Q ss_pred CCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCCCc
Q psy1119 537 QWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIKE 615 (1392)
Q Consensus 537 ~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~~ 615 (1392)
++++++||+++++++|||+++...+++++|++|||+| +|++|++++|+|+.+|++ |+++.++++|++++++ +++
T Consensus 148 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~----~Ga 222 (358)
T TIGR03451 148 AADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIG-CGGVGDAAIAGAALAGASKIIAVDIDDRKLEWARE----FGA 222 (358)
T ss_pred CCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCC
Confidence 9999999999999999999998889999999999996 599999999999999995 9999999999999975 678
Q ss_pred CceeeCCCccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCcccc-ccccCCCcEEEEEe
Q psy1119 616 ENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVM 693 (1392)
Q Consensus 616 ~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~ 693 (1392)
++++++++.++.+.+++.++++|+|+|+|++++ ..+..++++++++|+++.+|.........+. ..++.+++++.+..
T Consensus 223 ~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~ 302 (358)
T TIGR03451 223 THTVNSSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSW 302 (358)
T ss_pred ceEEcCCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEee
Confidence 999999888898999999998899999999986 5788999999999999999975322111122 24567888888874
Q ss_pred chhhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 694 LDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
..... . ....+.+.+++++|.+++ +++++|+++|+.+||+.+.+++.. |+++.
T Consensus 303 ~~~~~--~----~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 303 YGDCL--P----ERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred cCCCC--c----HHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 32111 1 122445567888999876 578999999999999999988876 77664
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=322.80 Aligned_cols=301 Identities=16% Similarity=0.205 Sum_probs=238.9
Q ss_pred CCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccce-----eeEEEEe--
Q psy1119 433 MSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGF-----EYSGRLR-- 505 (1392)
Q Consensus 433 l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~-----E~sGvV~-- 505 (1392)
+++|++++.+.|.. .|.|+++||+|||+|+|||+.|++...|..+.. . ..|.++|+ +++|+|.
T Consensus 18 ~~~~~~~~~~~~~~----~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~-~-----~~p~~~g~~~~g~~~~~~v~~~ 87 (338)
T cd08295 18 ESDLELRTTKLTLK----VPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSL-Y-----LPPFKPGEVITGYGVAKVVDSG 87 (338)
T ss_pred ccceEEEEecCCcC----CCCCCCCeEEEEEEEEeeCHHHHHhhccCCccc-c-----CCCcCCCCeEeccEEEEEEecC
Confidence 46788888877311 112799999999999999999999998853221 0 11445554 4444442
Q ss_pred ----eCCCeEEEeecCCcccceEEecc-cceEEcC-CCCCHh-hHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Q psy1119 506 ----DSGKRVMGLTSGRSLANCCETDV-EMAWEIP-DQWTLE-DAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGV 578 (1392)
Q Consensus 506 ----~vGdrV~gl~~~g~~a~~v~~~~-~~~~~iP-d~ls~e-~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgV 578 (1392)
++||+|+++ |+|+||+++++ ..++++| ++++++ +||+++++++|||+++...+++++|++|||+||+|++
T Consensus 88 v~~~~vGd~V~~~---g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~v 164 (338)
T cd08295 88 NPDFKVGDLVWGF---TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAV 164 (338)
T ss_pred CCCCCCCCEEEec---CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHH
Confidence 489999986 58999999999 7999995 679987 7999999999999999888999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCC-ccHHHHHHHHcCCCcceEEEecCchhHHHHHHhc
Q psy1119 579 GQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRD-TSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRC 657 (1392)
Q Consensus 579 G~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~-~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~ 657 (1392)
|++++|+|+.+|++|++++++++|++++++. +|+++++++++ .++.+.+++.++ +|+|+|||++++..+..+++|
T Consensus 165 G~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~---lGa~~vi~~~~~~~~~~~i~~~~~-~gvd~v~d~~g~~~~~~~~~~ 240 (338)
T cd08295 165 GQLVGQLAKLKGCYVVGSAGSDEKVDLLKNK---LGFDDAFNYKEEPDLDAALKRYFP-NGIDIYFDNVGGKMLDAVLLN 240 (338)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCceeEEcCCcccHHHHHHHhCC-CCcEEEEECCCHHHHHHHHHH
Confidence 9999999999999999999999999999863 57789999664 478888888875 799999999999889999999
Q ss_pred ccCCeEEEEEcccccccCc----ccc-ccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccc
Q psy1119 658 LAQGGRFLEIGKFDLANNN----MLG-MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPED 732 (1392)
Q Consensus 658 La~~Gr~v~iG~~~~~~~~----~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ 732 (1392)
++++|+++.+|........ ... ...+.+++++.++..... ++........+.+++.+|.+++.+..+|+++
T Consensus 241 l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~ 316 (338)
T cd08295 241 MNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDY----LHRYPEFLEEMSGYIKEGKLKYVEDIADGLE 316 (338)
T ss_pred hccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhh----HHHHHHHHHHHHHHHHCCCeEceeecccCHH
Confidence 9999999999864322111 011 234456677777543321 2223345566778899999998777789999
Q ss_pred cHHHHHHHHHcCCccceEEEEe
Q psy1119 733 KVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 733 ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
++.+|++.+.+++..||+|+++
T Consensus 317 ~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 317 SAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHHHhcCCCCceEEEEC
Confidence 9999999999999999999864
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=322.24 Aligned_cols=290 Identities=20% Similarity=0.251 Sum_probs=237.5
Q ss_pred CCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-------
Q psy1119 433 MSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR------- 505 (1392)
Q Consensus 433 l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~------- 505 (1392)
+..+++.+.|.|. +.++||+|+|.|+|+|+.|++...|.++.. ...|.++|||++|+|.
T Consensus 9 ~~~l~~~~~~~p~--------~~~~evlV~v~~~gi~~~D~~~~~~~~~~~------~~~p~i~G~e~~G~V~~vG~~v~ 74 (339)
T cd08239 9 DRTVELREFPVPV--------PGPGEVLLRVKASGLCGSDLHYYYHGHRAP------AYQGVIPGHEPAGVVVAVGPGVT 74 (339)
T ss_pred CCceEEEecCCCC--------CCCCeEEEEEEEEEeccccHHHHcCCCCcc------CCCCceeccCceEEEEEECCCCc
Confidence 3468888888875 689999999999999999999987754321 1126799999999987
Q ss_pred --eCCCeEEEee----------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHH
Q psy1119 506 --DSGKRVMGLT----------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVY 555 (1392)
Q Consensus 506 --~vGdrV~gl~----------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~ 555 (1392)
++||+|+... ..|+|++|+.+++..++++|+++++++||+++++++|||+
T Consensus 75 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~ 154 (339)
T cd08239 75 HFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYH 154 (339)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHH
Confidence 3688886532 2588999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHc
Q psy1119 556 AMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRT 634 (1392)
Q Consensus 556 aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T 634 (1392)
++ ..+++++|++|||+| +|++|++++|+|+++|++ |+++.++++|++++++ +++++++++++.+ .+.+++.+
T Consensus 155 ~l-~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~----~ga~~~i~~~~~~-~~~~~~~~ 227 (339)
T cd08239 155 AL-RRVGVSGRDTVLVVG-AGPVGLGALMLARALGAEDVIGVDPSPERLELAKA----LGADFVINSGQDD-VQEIRELT 227 (339)
T ss_pred HH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCCEEEcCCcch-HHHHHHHh
Confidence 98 457899999999996 599999999999999999 9999999999999875 6789999988877 77888888
Q ss_pred CCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHH
Q psy1119 635 KGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQ 713 (1392)
Q Consensus 635 ~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~ 713 (1392)
+++|+|+|||+.++. .+..++++++++|+++.+|..... .......++.+++++.|..... . .....+.
T Consensus 228 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~-----~----~~~~~~~ 297 (339)
T cd08239 228 SGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFS-----V----PDMEECA 297 (339)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCC-----H----HHHHHHH
Confidence 888999999999876 457899999999999999965322 1111123556889998875432 1 1234455
Q ss_pred HHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 714 KAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 714 ~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+++.+|.+++ +++++|+++++++||+.+.+++ .||+||+|
T Consensus 298 ~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 298 EFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred HHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 7788888875 6889999999999999998875 79999875
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=304.39 Aligned_cols=287 Identities=22% Similarity=0.278 Sum_probs=237.8
Q ss_pred ceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEeeC--------
Q psy1119 436 LTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDS-------- 507 (1392)
Q Consensus 436 l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~v-------- 507 (1392)
|.+++..+.. |+++||+||+.|+|+|.+|.+..+|..|.. .|.+||||.+|+|++|
T Consensus 15 l~i~ei~l~~--------P~~gEVlVri~AtGVCHTD~~~~~G~~p~~--------~P~vLGHEgAGiVe~VG~gVt~vk 78 (366)
T COG1062 15 LEIEEVDLDP--------PRAGEVLVRITATGVCHTDAHTLSGDDPEG--------FPAVLGHEGAGIVEAVGEGVTSVK 78 (366)
T ss_pred eEEEEEecCC--------CCCCeEEEEEEEeeccccchhhhcCCCCCC--------CceecccccccEEEEecCCccccC
Confidence 5566666654 689999999999999999999999998765 4899999999999854
Q ss_pred -CCeEEEe-ec-----------------------------C------------------CcccceEEecccceEEcCCCC
Q psy1119 508 -GKRVMGL-TS-----------------------------G------------------RSLANCCETDVEMAWEIPDQW 538 (1392)
Q Consensus 508 -GdrV~gl-~~-----------------------------~------------------g~~a~~v~~~~~~~~~iPd~l 538 (1392)
||+|+-. .+ + ++|++|.++++..++|++++.
T Consensus 79 pGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 79 PGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 5555211 00 0 489999999999999999999
Q ss_pred CHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCc
Q psy1119 539 TLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEEN 617 (1392)
Q Consensus 539 s~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~ 617 (1392)
+++.++.+.|...|.+-|..+.+++++|++|.|. |.||||+++||-|+..|| +|++++-+++|++++++ +|+.|
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~-GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~----fGAT~ 233 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVF-GLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKK----FGATH 233 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEE-eccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHh----cCCce
Confidence 9999999999999999999999999999999999 679999999999999999 58899999999999987 89999
Q ss_pred eeeCCCc-cHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEech
Q psy1119 618 IGNSRDT-SFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLD 695 (1392)
Q Consensus 618 i~~s~~~-~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~ 695 (1392)
++|+++. +..+.+.++|++ |+|++||+.+. +.+++++.|+.++|+.+.+|.........+....+..+.++.|+.+.
T Consensus 234 ~vn~~~~~~vv~~i~~~T~g-G~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G 312 (366)
T COG1062 234 FVNPKEVDDVVEAIVELTDG-GADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFG 312 (366)
T ss_pred eecchhhhhHHHHHHHhcCC-CCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEEEEeec
Confidence 9999988 699999999987 99999999986 68999999999999999999765443322222233444788887665
Q ss_pred hhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceE
Q psy1119 696 NFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKV 750 (1392)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKv 750 (1392)
..... ...-.+.+++.+|++.. +++++++++|+++||+.|.+|+.+-.|
T Consensus 313 ~~~p~------~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~V 363 (366)
T COG1062 313 GARPR------SDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSV 363 (366)
T ss_pred CCccc------cchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEE
Confidence 43221 12234456788898765 789999999999999999999887433
|
|
| >TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=316.38 Aligned_cols=283 Identities=15% Similarity=0.213 Sum_probs=229.3
Q ss_pred ccCCCC--CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 428 LVRGDM--SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 428 ~~~G~l--~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
..+|.+ ..+++.+.|.|. ++++||+|||.++|+|+.|++...|.++.. ..|.++|||++|+|+
T Consensus 5 ~~~g~~~~~~l~~~~~p~P~--------~~~~evlVkv~~~gi~~~D~~~~~g~~~~~-------~~p~i~G~e~~G~V~ 69 (329)
T TIGR02822 5 ERPGPIEDGPLRFVERPVPR--------PGPGELLVRVRACGVCRTDLHVSEGDLPVH-------RPRVTPGHEVVGEVA 69 (329)
T ss_pred ecCCcCCCCCceEEeCCCCC--------CCCCeEEEEEEEEeecchhHHHHcCCCCCC-------CCCccCCcceEEEEE
Confidence 345655 568999999886 689999999999999999999999976432 125789999999987
Q ss_pred ---------eCCCeEEEe----------------------------ecCCcccceEEecccceEEcCCCCCHhhHhhhhH
Q psy1119 506 ---------DSGKRVMGL----------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPC 548 (1392)
Q Consensus 506 ---------~vGdrV~gl----------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~ 548 (1392)
++||+|+.. ..+|+|++|+.+++..++++|++++++++|++++
T Consensus 70 ~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~ 149 (329)
T TIGR02822 70 GRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLC 149 (329)
T ss_pred EECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhc
Confidence 368888631 1248999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHH
Q psy1119 549 VYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQ 628 (1392)
Q Consensus 549 ~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~ 628 (1392)
+++|||+++. .+++++|++|||+|+ |++|++++|+|+.+|++|++++++++|++++++ +|+++++|+.+..
T Consensus 150 ~~~ta~~~~~-~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~----~Ga~~vi~~~~~~--- 220 (329)
T TIGR02822 150 AGIIGYRALL-RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLALA----LGAASAGGAYDTP--- 220 (329)
T ss_pred cchHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH----hCCceeccccccC---
Confidence 9999999995 688999999999986 999999999999999999999999999999886 7899998864321
Q ss_pred HHHHHcCCCcceEEEecCc-hhHHHHHHhcccCCeEEEEEcccccccCcccc-ccccCCCcEEEEEechhhhhhCHHHHH
Q psy1119 629 LVMKRTKGRGVDLVLNSLA-EEKLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVMLDNFFFAEQEWKM 706 (1392)
Q Consensus 629 ~i~~~T~g~GvDvVlds~~-~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~ 706 (1392)
.+++|+++++.+ ++.+..++++++++|+++.+|...... ..+. ...+.+++++.++.... ..
T Consensus 221 -------~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~-~~~~~~~~~~~~~~i~g~~~~~-----~~--- 284 (329)
T TIGR02822 221 -------PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDT-PPLNYQRHLFYERQIRSVTSNT-----RA--- 284 (329)
T ss_pred -------cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccC-CCCCHHHHhhCCcEEEEeecCC-----HH---
Confidence 247899888664 567899999999999999999642211 1122 23456788888864321 11
Q ss_pred HHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEE
Q psy1119 707 SLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 707 ~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI 752 (1392)
....+.+++++|++++ ++++|+++|+++||+.+.+++..||+||
T Consensus 285 -~~~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 285 -DAREFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred -HHHHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 1233456788898875 5789999999999999999999999987
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized. |
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-31 Score=319.76 Aligned_cols=291 Identities=18% Similarity=0.236 Sum_probs=237.5
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-------- 505 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-------- 505 (1392)
+.+++.+.|.|. ++++||+|||.++|||+.|++.+.|... .|.++|||++|+|+
T Consensus 23 ~~~~~~e~~~P~--------~~~~eVlVkv~~~gic~sD~~~~~g~~~----------~p~i~GhE~~G~V~~vG~~v~~ 84 (378)
T PLN02827 23 EALVMEEVEVSP--------PQPLEIRIKVVSTSLCRSDLSAWESQAL----------FPRIFGHEASGIVESIGEGVTE 84 (378)
T ss_pred CCceEEEeecCC--------CCCCEEEEEEEEEecChhHHHHhcCCCC----------CCeeecccceEEEEEcCCCCcc
Confidence 457788888875 6899999999999999999998877421 26789999999987
Q ss_pred -eCCCeEEEeec------------------------------------------------CCcccceEEecccceEEcCC
Q psy1119 506 -DSGKRVMGLTS------------------------------------------------GRSLANCCETDVEMAWEIPD 536 (1392)
Q Consensus 506 -~vGdrV~gl~~------------------------------------------------~g~~a~~v~~~~~~~~~iPd 536 (1392)
++||+|.+... .|+|++|+.+++..++++|+
T Consensus 85 ~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~ 164 (378)
T PLN02827 85 FEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDP 164 (378)
T ss_pred cCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCC
Confidence 36888876521 27899999999999999999
Q ss_pred CCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCCCc
Q psy1119 537 QWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIKE 615 (1392)
Q Consensus 537 ~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~~ 615 (1392)
++++++||.++++++|+|+++...+++++|++|||+| +|++|++++|+|+++|++ |+++..+++|++++++ +++
T Consensus 165 ~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G-~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~----lGa 239 (378)
T PLN02827 165 LAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFG-LGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKT----FGV 239 (378)
T ss_pred CCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCC
Confidence 9999999999999999999887888999999999996 599999999999999995 7777778999998865 678
Q ss_pred CceeeCCC--ccHHHHHHHHcCCCcceEEEecCchh-HHHHHHhcccCC-eEEEEEcccccccCccccccccCCCcEEEE
Q psy1119 616 ENIGNSRD--TSFEQLVMKRTKGRGVDLVLNSLAEE-KLQASVRCLAQG-GRFLEIGKFDLANNNMLGMEVFMRETSFHG 691 (1392)
Q Consensus 616 ~~i~~s~~--~~~~~~i~~~T~g~GvDvVlds~~~~-~l~~s~~~La~~-Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g 691 (1392)
++++++++ .++.+.+++.+++ |+|+|||+++.. .+..++++++++ |+++.+|.............++.+++++.|
T Consensus 240 ~~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g 318 (378)
T PLN02827 240 TDFINPNDLSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKG 318 (378)
T ss_pred cEEEcccccchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEe
Confidence 89998875 3677888888876 999999999874 688999999998 999999975322111111235678999998
Q ss_pred EechhhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEEec
Q psy1119 692 VMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
+....+.. . .....+.+++++|.+++ +++++|+++++.+||+.+.+++. +|+||.++
T Consensus 319 ~~~~~~~~--~----~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~ 377 (378)
T PLN02827 319 SLFGGWKP--K----SDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP 377 (378)
T ss_pred eecCCCch--h----hhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence 76543211 1 12334556788999998 78899999999999999998876 69999874
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-31 Score=318.88 Aligned_cols=291 Identities=19% Similarity=0.320 Sum_probs=231.1
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR--------- 505 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~--------- 505 (1392)
.+++.+.|.|. ++++||+|||.|+|+|++|++...|.++.. ..|.++|||++|+|+
T Consensus 13 ~l~~~~~~~P~--------~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~-------~~p~i~GhE~~G~V~~vG~~v~~~ 77 (368)
T TIGR02818 13 PLKIEEVDVEM--------PQKGEVLVRIVATGVCHTDAFTLSGADPEG-------VFPVILGHEGAGIVEAVGEGVTSV 77 (368)
T ss_pred CeEEEEecCCC--------CCCCeEEEEEEEecccHHHHHHhcCCCCCC-------CCCeeeccccEEEEEEECCCCccC
Confidence 47778888775 689999999999999999999999876432 137899999999987
Q ss_pred eCCCeEEEeec------------------------------------------------CCcccceEEecccceEEcCCC
Q psy1119 506 DSGKRVMGLTS------------------------------------------------GRSLANCCETDVEMAWEIPDQ 537 (1392)
Q Consensus 506 ~vGdrV~gl~~------------------------------------------------~g~~a~~v~~~~~~~~~iPd~ 537 (1392)
++||||..... .|+|+||+.+|+..++++|++
T Consensus 78 ~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~ 157 (368)
T TIGR02818 78 KVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPA 157 (368)
T ss_pred CCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCC
Confidence 46888875420 268999999999999999999
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcC
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEE 616 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~ 616 (1392)
+++++||+++++++|||+++...+++++|++|||+| +|++|++++|+|+++|+ +|++++.+++|++++++ ++++
T Consensus 158 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~----~Ga~ 232 (368)
T TIGR02818 158 APLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFG-LGGIGLSVIQGARMAKASRIIAIDINPAKFELAKK----LGAT 232 (368)
T ss_pred CCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCC
Confidence 999999999999999999998889999999999996 59999999999999999 79999999999999976 6788
Q ss_pred ceeeCCC--ccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCC-eEEEEEcccccccC-ccccccccCCCcEEEE
Q psy1119 617 NIGNSRD--TSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQG-GRFLEIGKFDLANN-NMLGMEVFMRETSFHG 691 (1392)
Q Consensus 617 ~i~~s~~--~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~-Gr~v~iG~~~~~~~-~~l~~~~~~k~~s~~g 691 (1392)
+++|.++ .++.+.+++.|++ |+|+|||++++ ..+..++++++++ |+++.+|....... .......+ ++..+.+
T Consensus 233 ~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g 310 (368)
T TIGR02818 233 DCVNPNDYDKPIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWRG 310 (368)
T ss_pred eEEcccccchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEEE
Confidence 9998764 4577888888886 99999999985 5788999999986 99999996532111 11111222 2344555
Q ss_pred EechhhhhhCHHHHHHHHHHHHHHHHcCCCC--CcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 692 VMLDNFFFAEQEWKMSLQKALQKAIDAGAVQ--PLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
...... ... ..+..+.+++.+|.++ ++++++|+++|+++||+.+.+++. .|++|.+
T Consensus 311 ~~~~~~--~~~----~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 311 SAFGGV--KGR----TELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred eeccCC--CcH----HHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 532211 011 1234455678888875 468999999999999999988765 6988763
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=318.58 Aligned_cols=289 Identities=14% Similarity=0.189 Sum_probs=229.5
Q ss_pred CCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe----
Q psy1119 430 RGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR---- 505 (1392)
Q Consensus 430 ~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~---- 505 (1392)
.+....++..+.+.|. ++++||+|||.++|||++|++++.|.++.. ..|.++|||++|+|+
T Consensus 19 ~~~~~~l~~~~~~~p~--------~~~~eVlV~v~~~gic~sD~~~~~g~~~~~-------~~p~i~GhE~~G~V~~vG~ 83 (360)
T PLN02586 19 RDPSGVLSPFHFSRRE--------NGDEDVTVKILYCGVCHSDLHTIKNEWGFT-------RYPIVPGHEIVGIVTKLGK 83 (360)
T ss_pred cCCCCCceEEeecCCC--------CCCCeEEEEEEEecCChhhHhhhcCCcCCC-------CCCccCCcceeEEEEEECC
Confidence 3334456666766664 689999999999999999999998865421 236799999999987
Q ss_pred -----eCCCeEEEe-----------------------------------ecCCcccceEEecccceEEcCCCCCHhhHhh
Q psy1119 506 -----DSGKRVMGL-----------------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAAT 545 (1392)
Q Consensus 506 -----~vGdrV~gl-----------------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~ 545 (1392)
++||+|... ...|+|+||+.+++..++++|+++++++||+
T Consensus 84 ~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~ 163 (360)
T PLN02586 84 NVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAP 163 (360)
T ss_pred CCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhh
Confidence 368898631 1148899999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCcc
Q psy1119 546 VPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTS 625 (1392)
Q Consensus 546 lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~ 625 (1392)
+++++.|||+++...+.+++|++|||.| +|++|++++|+|+.+|++|++++.+++++..+.+ .+|++++++.++.
T Consensus 164 l~~~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~---~~Ga~~vi~~~~~- 238 (360)
T PLN02586 164 LLCAGITVYSPMKYYGMTEPGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN---RLGADSFLVSTDP- 238 (360)
T ss_pred hhcchHHHHHHHHHhcccCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH---hCCCcEEEcCCCH-
Confidence 9999999999997777788999999975 5999999999999999999988887777665544 3678999987653
Q ss_pred HHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhhhhhCHH
Q psy1119 626 FEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFFAEQE 703 (1392)
Q Consensus 626 ~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~~~~~ 703 (1392)
+.+++.++ ++|+|||+++. ..++.++++++++|+++.+|..... ..+++ .++.++..+.|..... .
T Consensus 239 --~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~--~~~~~~~~~~~~~~i~g~~~~~-----~- 306 (360)
T PLN02586 239 --EKMKAAIG--TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKP--LELPIFPLVLGRKLVGGSDIGG-----I- 306 (360)
T ss_pred --HHHHhhcC--CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCC--CccCHHHHHhCCeEEEEcCcCC-----H-
Confidence 35555554 69999999986 4788999999999999999964321 12222 3355677777765432 1
Q ss_pred HHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 704 WKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 704 ~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
..+..+.+++++|++++.+ ++|+++|+++||+.+.+++..||+|+.+
T Consensus 307 ---~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 307 ---KETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred ---HHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 1234455788899998865 5899999999999999999999999987
|
|
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-31 Score=319.53 Aligned_cols=292 Identities=22% Similarity=0.273 Sum_probs=235.6
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR--------- 505 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~--------- 505 (1392)
.+.+.+.|.|. ++++||+|+|.++|||+.|++.+.|.++.. ...|+++|||++|+|+
T Consensus 22 ~~~~~e~~~P~--------~~~~eVlV~v~~~gic~sD~~~~~g~~~~~------~~~p~i~GhE~~G~V~~vG~~v~~~ 87 (381)
T PLN02740 22 PLVMEEIRVDP--------PQKMEVRIKILYTSICHTDLSAWKGENEAQ------RAYPRILGHEAAGIVESVGEGVEDL 87 (381)
T ss_pred CcEEEEeeCCC--------CCCCeEEEEEEEEecChhhHHHhCCCCccc------CCCCccccccceEEEEEeCCCCCcC
Confidence 36677777765 689999999999999999999999875321 1237899999999987
Q ss_pred eCCCeEEEee---------------------------------------------------cCCcccceEEecccceEEc
Q psy1119 506 DSGKRVMGLT---------------------------------------------------SGRSLANCCETDVEMAWEI 534 (1392)
Q Consensus 506 ~vGdrV~gl~---------------------------------------------------~~g~~a~~v~~~~~~~~~i 534 (1392)
++||||++.. ..|+|+||+.+++..++++
T Consensus 88 ~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~i 167 (381)
T PLN02740 88 KAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKI 167 (381)
T ss_pred CCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEEC
Confidence 3688997632 1479999999999999999
Q ss_pred CCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCC
Q psy1119 535 PDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFI 613 (1392)
Q Consensus 535 Pd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l 613 (1392)
|+++++++||.+++++.|||+++...+++++|++|||+| +|++|++++|+|+.+|+ +|++++.+++|++++++ +
T Consensus 168 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~----~ 242 (381)
T PLN02740 168 DPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFG-LGAVGLAVAEGARARGASKIIGVDINPEKFEKGKE----M 242 (381)
T ss_pred CCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH----c
Confidence 999999999999999999999988889999999999996 59999999999999999 59999999999999976 6
Q ss_pred CcCceeeCCCc--cHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCC-eEEEEEcccccccCccccccccCCCcEE
Q psy1119 614 KEENIGNSRDT--SFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQG-GRFLEIGKFDLANNNMLGMEVFMRETSF 689 (1392)
Q Consensus 614 ~~~~i~~s~~~--~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~-Gr~v~iG~~~~~~~~~l~~~~~~k~~s~ 689 (1392)
++++++|.++. ++.+.+++.+++ |+|+|||++++ +.+..++++++++ |+++.+|.........+....+.+++++
T Consensus 243 Ga~~~i~~~~~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i 321 (381)
T PLN02740 243 GITDFINPKDSDKPVHERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSI 321 (381)
T ss_pred CCcEEEecccccchHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeE
Confidence 78899988764 488889888887 99999999986 6789999999997 9999999753221111221112367888
Q ss_pred EEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 690 HGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 690 ~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
.|+....+.. . .....+.+++.+|.+++ +++++|+++|+++||+.+.+++.. |++|+
T Consensus 322 ~g~~~~~~~~--~----~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~-k~~~~ 380 (381)
T PLN02740 322 TGSVFGDFKG--K----SQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKAL-RCLLH 380 (381)
T ss_pred EEEecCCCCc--H----HHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCce-eEEEe
Confidence 8875543211 1 11344556778888765 678999999999999999888764 98876
|
|
| >KOG0024|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-32 Score=294.42 Aligned_cols=295 Identities=20% Similarity=0.283 Sum_probs=232.1
Q ss_pred CCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-------
Q psy1119 433 MSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR------- 505 (1392)
Q Consensus 433 l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~------- 505 (1392)
+..+++.+.|.|.. +.|+||+|+++++|||.+|++.++....... -...|.+||||.+|+|.
T Consensus 13 ~~di~i~~~p~p~i-------~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~----v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 13 KGDIRIEQRPIPTI-------TDPDEVLVAIKAVGICGSDVHYYTHGRIGDF----VVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cCceeEeeCCCCCC-------CCCCEEEEEeeeEEecCccchhhccCCcCcc----ccccccccccccccchhhhccccc
Confidence 34567888888763 5999999999999999999999865433221 12358899999999997
Q ss_pred --eCCCeEE------------------------Eee----cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHH
Q psy1119 506 --DSGKRVM------------------------GLT----SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVY 555 (1392)
Q Consensus 506 --~vGdrV~------------------------gl~----~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~ 555 (1392)
++||||. .+. .+|++++|++.++++|+|+||++|+|++|.+. ++++++|
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLsV~~H 160 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLSVGVH 160 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhccccc-chhhhhh
Confidence 4677762 111 13899999999999999999999999999997 7999999
Q ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCcc----HHHHH
Q psy1119 556 AMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTS----FEQLV 630 (1392)
Q Consensus 556 aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~----~~~~i 630 (1392)
|. .++++++|++|||.|| |+||+.++..|+++|| +|+.+.-.+.|++.+++ +|++++.++...+ +.+.+
T Consensus 161 Ac-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~----~Ga~~~~~~~~~~~~~~~~~~v 234 (354)
T KOG0024|consen 161 AC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKK----FGATVTDPSSHKSSPQELAELV 234 (354)
T ss_pred hh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH----hCCeEEeeccccccHHHHHHHH
Confidence 98 7899999999999955 9999999999999999 68888888999999987 6899988876633 44555
Q ss_pred HHHcCCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHH
Q psy1119 631 MKRTKGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQ 709 (1392)
Q Consensus 631 ~~~T~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~ 709 (1392)
....+...+|++|||.+.+ .+++++.+++.+|+++..|... .......+....|++.+.|+.-.. . ...
T Consensus 235 ~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~-~~~~fpi~~v~~kE~~~~g~fry~-----~----~~y 304 (354)
T KOG0024|consen 235 EKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGA-EEIQFPIIDVALKEVDLRGSFRYC-----N----GDY 304 (354)
T ss_pred HhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCC-CccccChhhhhhheeeeeeeeeec-----c----ccH
Confidence 5555556699999999865 6899999999999988887543 223333456678999999875321 1 122
Q ss_pred HHHHHHHHcCCC--CCcceeeeccccHHHHHHHHHcCCccc-eEEEEec
Q psy1119 710 KALQKAIDAGAV--QPLVRTIFPEDKVEEAFRYMAAGKHIG-KVIIKIR 755 (1392)
Q Consensus 710 ~~~~~~l~~g~l--~pl~~~vf~l~ev~eA~~~l~~g~~~G-KvVI~~~ 755 (1392)
....+++.+|++ +|++++.|+++++.+||+.++.++..+ |++|..+
T Consensus 305 ~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~ 353 (354)
T KOG0024|consen 305 PTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP 353 (354)
T ss_pred HHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence 334567888975 458999999999999999999888533 7777654
|
|
| >KOG1198|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=313.41 Aligned_cols=306 Identities=27% Similarity=0.397 Sum_probs=239.1
Q ss_pred CCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE---e-
Q psy1119 430 RGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL---R- 505 (1392)
Q Consensus 430 ~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV---~- 505 (1392)
.|....+...+.+.|. +.+++++|++.++++|+.|.++..|.+.... .....|.+++.+++|++ .
T Consensus 14 ~~~~~~~~~~~~~iP~--------~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~---~~~~~p~ii~~~g~~~~~~~~~ 82 (347)
T KOG1198|consen 14 PGGGEVLFSEEVPIPE--------PEDGEVLIKVVAVALNPIDLKIRNGYYSPIP---LGREFPGIIGRDGSGVVGAVES 82 (347)
T ss_pred CCCcceEEeecccCCC--------CCCCceEEEEEEeccChHHHHHHccCcCCCC---CccCCCCccccccCCceeEEec
Confidence 4445555556777775 7899999999999999999999999876542 12234656666666652 2
Q ss_pred ---------eCCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhc------CCCCCCEEE
Q psy1119 506 ---------DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICG------QMQKGESIL 570 (1392)
Q Consensus 506 ---------~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a------~l~~GetVL 570 (1392)
..|+.++....+|+|++|+++|+..++++|+++++++||++|+++.|||.+|+..+ ++++|++||
T Consensus 83 ~g~~~~~~~~~g~~~~~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vL 162 (347)
T KOG1198|consen 83 VGDDVVGGWVHGDAVVAFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVL 162 (347)
T ss_pred cccccccceEeeeEEeeccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEE
Confidence 23455566667899999999999999999999999999999999999999999999 999999999
Q ss_pred EEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhH
Q psy1119 571 IHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEK 650 (1392)
Q Consensus 571 I~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~ 650 (1392)
||||+||||++|||+|++.|+..++|++++++.+++++ +|+++++|+++.++.+.++..| +.|||+||||+++..
T Consensus 163 v~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~----lGAd~vvdy~~~~~~e~~kk~~-~~~~DvVlD~vg~~~ 237 (347)
T KOG1198|consen 163 VLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKK----LGADEVVDYKDENVVELIKKYT-GKGVDVVLDCVGGST 237 (347)
T ss_pred EEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHH----cCCcEeecCCCHHHHHHHHhhc-CCCccEEEECCCCCc
Confidence 99999999999999999999767777778899999987 8999999999999999999999 889999999999988
Q ss_pred HHHHHhcccCCeEEEEEcccccccCc-cccc-c--cc---CCCcEEEEEechhh-hhhCHHHHHHHHHHHHHHHHcCCCC
Q psy1119 651 LQASVRCLAQGGRFLEIGKFDLANNN-MLGM-E--VF---MRETSFHGVMLDNF-FFAEQEWKMSLQKALQKAIDAGAVQ 722 (1392)
Q Consensus 651 l~~s~~~La~~Gr~v~iG~~~~~~~~-~l~~-~--~~---~k~~s~~g~~~~~~-~~~~~~~~~~~~~~~~~~l~~g~l~ 722 (1392)
+..+..|++.+|+...++.......+ ...+ . .. .....+.+...... +... .+..+.+.+++++|+++
T Consensus 238 ~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~l~~~ie~gkik 313 (347)
T KOG1198|consen 238 LTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPS----AEYLKALVELIEKGKIK 313 (347)
T ss_pred cccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCC----HHHHHHHHHHHHcCccc
Confidence 88999999999875555532211111 1110 0 00 01111222211111 1112 34556666788999999
Q ss_pred CcceeeeccccHHHHHHHHHcCCccceEEEEec
Q psy1119 723 PLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 723 pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
|.+.++||++++.+||..+.++...||+++++.
T Consensus 314 p~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 314 PVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred CCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 999999999999999999999999999999874
|
|
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-31 Score=316.49 Aligned_cols=289 Identities=14% Similarity=0.216 Sum_probs=228.9
Q ss_pred CCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe----
Q psy1119 430 RGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR---- 505 (1392)
Q Consensus 430 ~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~---- 505 (1392)
.+....+...+.+.|. ++++||+|||.++|||+.|++++.|.++.. ..|.++|||++|+|+
T Consensus 13 ~~~~~~l~~~~~~~p~--------~~~~eVlVkV~a~gic~sD~~~~~G~~~~~-------~~p~i~GhE~aG~Vv~vG~ 77 (375)
T PLN02178 13 NDESGVLSPFHFSRRE--------NGENDVTVKILFCGVCHSDLHTIKNHWGFS-------RYPIIPGHEIVGIATKVGK 77 (375)
T ss_pred ccCCCCceEEeecCCC--------CCCCeEEEEEEEEcCchHHHHHhcCCCCCC-------CCCcccCceeeEEEEEECC
Confidence 3444556666766664 689999999999999999999998865321 136789999999987
Q ss_pred -----eCCCeEEE-e----------------------------------ecCCcccceEEecccceEEcCCCCCHhhHhh
Q psy1119 506 -----DSGKRVMG-L----------------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAAT 545 (1392)
Q Consensus 506 -----~vGdrV~g-l----------------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~ 545 (1392)
++||||.. . ...|+|++|+.++++.++++|+++|+++||+
T Consensus 78 ~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~ 157 (375)
T PLN02178 78 NVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAP 157 (375)
T ss_pred CCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcch
Confidence 36889863 1 0148899999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHHHCCCCCcCceeeCCC
Q psy1119 546 VPCVYATAVYAMFICGQ-MQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEK-REFIRKTFPFIKEENIGNSRD 623 (1392)
Q Consensus 546 lp~~~~TA~~aL~~~a~-l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek-~~~l~~~~p~l~~~~i~~s~~ 623 (1392)
+++++.|+|+++...+. .++|++|+|+| +|++|++++|+|+++|++|++++.++++ .+++++ ++++++++.++
T Consensus 158 l~~~~~ta~~al~~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~----lGa~~~i~~~~ 232 (375)
T PLN02178 158 LLCAGITVYSPMKYYGMTKESGKRLGVNG-LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDR----LGADSFLVTTD 232 (375)
T ss_pred hhccchHHHHHHHHhCCCCCCCCEEEEEc-ccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHh----CCCcEEEcCcC
Confidence 99999999999865543 36899999996 5999999999999999999998877665 455543 68899998765
Q ss_pred ccHHHHHHHHcCCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCH
Q psy1119 624 TSFEQLVMKRTKGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQ 702 (1392)
Q Consensus 624 ~~~~~~i~~~T~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~ 702 (1392)
. +.+.+.++ ++|+|||+++.. .+..++++++++|+++.+|.... ........++.+++++.|..... .
T Consensus 233 ~---~~v~~~~~--~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~-~~~~~~~~~~~~~~~i~g~~~~~-----~ 301 (375)
T PLN02178 233 S---QKMKEAVG--TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK-PLDLPIFPLVLGRKMVGGSQIGG-----M 301 (375)
T ss_pred H---HHHHHhhC--CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC-CCccCHHHHHhCCeEEEEeCccC-----H
Confidence 3 45666663 799999999875 68899999999999999996532 11111224556888998875432 1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 703 EWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 703 ~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
. ....+.+++.+|++++.+ ++||++|+.+||+.+.+++..||+|+.+
T Consensus 302 ~----~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 302 K----ETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred H----HHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 1 133455788999998876 6799999999999999999999999998
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-31 Score=308.57 Aligned_cols=306 Identities=21% Similarity=0.266 Sum_probs=259.3
Q ss_pred cCCCCC--CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee
Q psy1119 429 VRGDMS--SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD 506 (1392)
Q Consensus 429 ~~G~l~--~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~ 506 (1392)
+.|.+. .+.|.+.|.|. +.+++|+|+|.++|+|++|+.+..|.++.. ...|.++|+|++|+|.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~--------~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~------~~~~~~~g~e~~G~v~~ 70 (323)
T cd05282 5 QFGEPLPLVLELVSLPIPP--------PGPGEVLVRMLAAPINPSDLITISGAYGSR------PPLPAVPGNEGVGVVVE 70 (323)
T ss_pred cCCCCccceEEeEeCCCCC--------CCCCeEEEEEEeccCCHHHHHHhcCcCCCC------CCCCCcCCcceEEEEEE
Confidence 345444 78888877764 688999999999999999999988866432 11367899999999863
Q ss_pred ---------CCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCch
Q psy1119 507 ---------SGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGG 577 (1392)
Q Consensus 507 ---------vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~Gg 577 (1392)
+||+|+++...|+|++|+.++...++++|+++++++++.++++++|||+++...+++.+|++|||||++|+
T Consensus 71 ~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~ 150 (323)
T cd05282 71 VGSGVSGLLVGQRVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSA 150 (323)
T ss_pred eCCCCCCCCCCCEEEEeCCCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccH
Confidence 58899887635899999999999999999999999999999999999999988889999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhc
Q psy1119 578 VGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRC 657 (1392)
Q Consensus 578 VG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~ 657 (1392)
+|++++|+|+++|++|+++++++++++++++ ++.++++++++.++.+.+++.++++|+|+|||++++......++|
T Consensus 151 vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~ 226 (323)
T cd05282 151 VGRMLIQLAKLLGFKTINVVRRDEQVEELKA----LGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARS 226 (323)
T ss_pred HHHHHHHHHHHCCCeEEEEecChHHHHHHHh----cCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHh
Confidence 9999999999999999999999999999964 567899999888888999999999999999999998888889999
Q ss_pred ccCCeEEEEEcccccccCccccccccC-CCcEEEEEechhhhhh-CHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHH
Q psy1119 658 LAQGGRFLEIGKFDLANNNMLGMEVFM-RETSFHGVMLDNFFFA-EQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVE 735 (1392)
Q Consensus 658 La~~Gr~v~iG~~~~~~~~~l~~~~~~-k~~s~~g~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~ 735 (1392)
++++|+++.+|..+.. ...+.+..+. +++++.++.+..+... .+......++.+.+++.+|.+.+.+.++|++++++
T Consensus 227 l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 305 (323)
T cd05282 227 LRPGGTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFE 305 (323)
T ss_pred hCCCCEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHH
Confidence 9999999999876443 2233334444 8999999887665433 45555666777778899999988888999999999
Q ss_pred HHHHHHHcCCccceEEEE
Q psy1119 736 EAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 736 eA~~~l~~g~~~GKvVI~ 753 (1392)
+||+.+..+++.||+|++
T Consensus 306 ~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 306 EAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHhcCCCCceEeeC
Confidence 999999999999998863
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-31 Score=317.28 Aligned_cols=291 Identities=19% Similarity=0.278 Sum_probs=232.0
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~-------- 506 (1392)
.+++.+.|.|. ++++||+|||.|+|||+.|++...|.++.. ..|.++|||++|+|++
T Consensus 14 ~~~~~~~~~P~--------~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~-------~~p~v~G~E~~G~V~~vG~~v~~~ 78 (368)
T cd08300 14 PLSIEEVEVAP--------PKAGEVRIKILATGVCHTDAYTLSGADPEG-------LFPVILGHEGAGIVESVGEGVTSV 78 (368)
T ss_pred CcEEEEeecCC--------CCCCEEEEEEEEEEechhhHHHhcCCCccC-------CCCceeccceeEEEEEeCCCCccC
Confidence 47778887775 689999999999999999999999876532 1377999999999863
Q ss_pred -CCCeEEEee------------------------------------------------cCCcccceEEecccceEEcCCC
Q psy1119 507 -SGKRVMGLT------------------------------------------------SGRSLANCCETDVEMAWEIPDQ 537 (1392)
Q Consensus 507 -vGdrV~gl~------------------------------------------------~~g~~a~~v~~~~~~~~~iPd~ 537 (1392)
+||+|++.. ..|+|+||+.+++..++++|++
T Consensus 79 ~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 158 (368)
T cd08300 79 KPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPE 158 (368)
T ss_pred CCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCC
Confidence 688997641 1258999999999999999999
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcC
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEE 616 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~ 616 (1392)
+++++||+++++++|||+++...+++++|++|||+| +|++|++++|+|+++|+ +|++++++++|++++++ ++++
T Consensus 159 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~----lGa~ 233 (368)
T cd08300 159 APLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKK----FGAT 233 (368)
T ss_pred CChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH----cCCC
Confidence 999999999999999999998889999999999996 59999999999999999 69999999999999865 6889
Q ss_pred ceeeCCCc--cHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCC-eEEEEEcccccccCccccccccCCCcEEEEE
Q psy1119 617 NIGNSRDT--SFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQG-GRFLEIGKFDLANNNMLGMEVFMRETSFHGV 692 (1392)
Q Consensus 617 ~i~~s~~~--~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~-Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~ 692 (1392)
+++|+++. ++.+.+++.|++ |+|+|||++++ ..+..++++++++ |+++.+|..............+.++.++.+.
T Consensus 234 ~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~ 312 (368)
T cd08300 234 DCVNPKDHDKPIQQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGT 312 (368)
T ss_pred EEEcccccchHHHHHHHHHhCC-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEE
Confidence 99998764 588889888886 99999999986 5788999999986 9999999653211111111112233455554
Q ss_pred echhhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 693 MLDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
....+. .. .....+.+++.+|++++ +++++|+++|+++||+.+.+++. .|++++
T Consensus 313 ~~~~~~--~~----~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 313 AFGGWK--SR----SQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred EecccC--cH----HHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 433221 11 12334556788898876 57899999999999999988875 588774
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-31 Score=311.26 Aligned_cols=311 Identities=18% Similarity=0.220 Sum_probs=255.6
Q ss_pred ccCCCC-CCceEEeCCCCcccccccCCCCC-CeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 428 LVRGDM-SSLTWEQGPVNMKTWKKYSKDNI-NHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 428 ~~~G~l-~~l~~~~~~~~~~~~~~~~~~~~-~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
..+|.+ +.+.|.+.|.|. +.+ ++|+|+|.++|+|+.|++...|.++.... .....|+++|||++|+|.
T Consensus 7 ~~~~~~~~~~~~~~~~~p~--------~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~--~~~~~~~~~g~e~~G~V~ 76 (341)
T cd08290 7 TEHGEPKEVLQLESYEIPP--------PGPPNEVLVKMLAAPINPADINQIQGVYPIKPP--TTPEPPAVGGNEGVGEVV 76 (341)
T ss_pred ccCCCchhheEEeecCCCC--------CCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCc--ccCCCCCCCCcceEEEEE
Confidence 345544 468888888875 455 99999999999999999999887653210 000136689999999986
Q ss_pred ---------eCCCeEEEeec-CCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCC
Q psy1119 506 ---------DSGKRVMGLTS-GRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGS 575 (1392)
Q Consensus 506 ---------~vGdrV~gl~~-~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~ 575 (1392)
++||+|+++.. .|+|++|+.++...++++|+++++++||+++++++|||+++...+.+++|++||||||+
T Consensus 77 ~vG~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~ 156 (341)
T cd08290 77 KVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGAN 156 (341)
T ss_pred EeCCCCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccch
Confidence 36788887653 58999999999999999999999999999999999999999888899999999999999
Q ss_pred chHHHHHHHHHHHcCCEEEEEecCh----hhHHHHHHHCCCCCcCceeeCCCc---cHHHHHHHHcCCCcceEEEecCch
Q psy1119 576 GGVGQAAINLARYMDAEIFTTVGTP----EKREFIRKTFPFIKEENIGNSRDT---SFEQLVMKRTKGRGVDLVLNSLAE 648 (1392)
Q Consensus 576 GgVG~aaIqlA~~~Ga~V~~tv~s~----ek~~~l~~~~p~l~~~~i~~s~~~---~~~~~i~~~T~g~GvDvVlds~~~ 648 (1392)
|++|++++|+|+++|++|+++++++ ++++++++ ++++++++.+.. ++.+.++..+++ ++|+|||+.++
T Consensus 157 g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~ 231 (341)
T cd08290 157 SAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKA----LGADHVLTEEELRSLLATELLKSAPGG-RPKLALNCVGG 231 (341)
T ss_pred hHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHh----cCCCEEEeCcccccccHHHHHHHHcCC-CceEEEECcCc
Confidence 9999999999999999999999876 66788854 788999998876 788888888887 89999999998
Q ss_pred hHHHHHHhcccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhhhh-hCHHHHHHHHHHHHHHHHcCCCCCcce
Q psy1119 649 EKLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFF-AEQEWKMSLQKALQKAIDAGAVQPLVR 726 (1392)
Q Consensus 649 ~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~l~pl~~ 726 (1392)
..+...++|++++|+++.+|....... .+.+ ..+.++++|.++....+.. ..+......+..+.+++.+|.+.+.+.
T Consensus 232 ~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 310 (341)
T cd08290 232 KSATELARLLSPGGTMVTYGGMSGQPV-TVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPV 310 (341)
T ss_pred HhHHHHHHHhCCCCEEEEEeccCCCCc-ccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcc
Confidence 888889999999999999986433221 2222 4478899999998766543 344444556666778889999998777
Q ss_pred eee---ccccHHHHHHHHHcCCccceEEEEe
Q psy1119 727 TIF---PEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 727 ~vf---~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
.+| +++++.+||+.+.+++..||+|+.+
T Consensus 311 ~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 311 EKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred cccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 777 9999999999999999999999864
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-30 Score=304.37 Aligned_cols=306 Identities=23% Similarity=0.275 Sum_probs=254.9
Q ss_pred ccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--
Q psy1119 428 LVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-- 505 (1392)
Q Consensus 428 ~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-- 505 (1392)
..++.+..+.|.+.+.|. +.+++|+|+|.++|+|+.|+....|..+... ....|.++|+|++|+|.
T Consensus 7 ~~~~~~~~~~~~~~~~~~--------~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~----~~~~p~~~g~e~~G~v~~~ 74 (324)
T cd08244 7 HEFGPPEVLVPEDVPDPV--------PGPGQVRIAVAAAGVHFVDTQLRSGWGPGPF----PPELPYVPGGEVAGVVDAV 74 (324)
T ss_pred cCCCCccceEEeccCCCC--------CCCCEEEEEEEEEeCCHHHHHHhCCCCCCCC----CCCCCcCCccceEEEEEEe
Confidence 456667778887776653 6889999999999999999999988654210 11225689999999986
Q ss_pred -------eCCCeEEEeec--CCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Q psy1119 506 -------DSGKRVMGLTS--GRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSG 576 (1392)
Q Consensus 506 -------~vGdrV~gl~~--~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~G 576 (1392)
++||+|+++.. .|+|++|+.++...++++|+++++++|++++++++|| +++...+++++|++|+|||++|
T Consensus 75 G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta-~~~~~~~~~~~~~~vlI~g~~~ 153 (324)
T cd08244 75 GPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTA-LGLLDLATLTPGDVVLVTAAAG 153 (324)
T ss_pred CCCCCCCCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHH-HHHHHhcCCCCCCEEEEEcCCc
Confidence 36888888652 5899999999999999999999999999999999999 6777888999999999999999
Q ss_pred hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHh
Q psy1119 577 GVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVR 656 (1392)
Q Consensus 577 gVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~ 656 (1392)
++|++++|+|+.+|++|+++++++++++++++ ++.+++++.++.++.+.+++.++++++|+|+|+.++.....+++
T Consensus 154 ~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~ 229 (324)
T cd08244 154 GLGSLLVQLAKAAGATVVGAAGGPAKTALVRA----LGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALA 229 (324)
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHH
Confidence 99999999999999999999999999999854 56788999888889899999898899999999999888899999
Q ss_pred cccCCeEEEEEcccccccCcccc-ccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHH
Q psy1119 657 CLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVE 735 (1392)
Q Consensus 657 ~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~ 735 (1392)
+++++|+++.+|..+.... .+. ...+.+++++.++.+.... +.......+.+.+++.++.+.+++.++|+++++.
T Consensus 230 ~l~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 305 (324)
T cd08244 230 LLAPGGRFLTYGWASGEWT-ALDEDDARRRGVTVVGLLGVQAE---RGGLRALEARALAEAAAGRLVPVVGQTFPLERAA 305 (324)
T ss_pred HhccCcEEEEEecCCCCCC-ccCHHHHhhCCcEEEEeecccCC---HHHHHHHHHHHHHHHHCCCccCccceEEeHHHHH
Confidence 9999999999997643322 223 3457889999988764322 2233445566667888999988888999999999
Q ss_pred HHHHHHHcCCccceEEEEe
Q psy1119 736 EAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 736 eA~~~l~~g~~~GKvVI~~ 754 (1392)
+||+.+.+++..||+|+++
T Consensus 306 ~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 306 EAHAALEARSTVGKVLLLP 324 (324)
T ss_pred HHHHHHHcCCCCceEEEeC
Confidence 9999999999999998753
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-30 Score=310.86 Aligned_cols=286 Identities=16% Similarity=0.218 Sum_probs=225.3
Q ss_pred CCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhc-CCCChhhhhhhccccccccceeeEEEEe------
Q psy1119 433 MSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTT-AKLAPEVIESRRLYQHCVIGFEYSGRLR------ 505 (1392)
Q Consensus 433 l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~-G~~~~~~~~~~~~~~p~~lG~E~sGvV~------ 505 (1392)
+..+++.+.|.| ++++||+|||.|+|||+.|++.+. |..+.. ....|.++|||++|+|+
T Consensus 13 ~~~~~~~~~~~p---------~~~~evlVkv~a~gic~sD~~~~~~g~~~~~-----~~~~p~v~GhE~~G~V~~v~v~~ 78 (343)
T PRK09880 13 KKDVAVTEQEIE---------WNNNGTLVQITRGGICGSDLHYYQEGKVGNF-----VIKAPMVLGHEVIGKIVHSDSSG 78 (343)
T ss_pred CCceEEEecCCC---------CCCCeEEEEEEEEEECccccHhhccCCcccc-----cccCCcccCcccEEEEEEecCcc
Confidence 345777777764 478999999999999999999874 443211 01237899999999997
Q ss_pred -eCCCeEEEe--------------------------------ecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHH
Q psy1119 506 -DSGKRVMGL--------------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYAT 552 (1392)
Q Consensus 506 -~vGdrV~gl--------------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~T 552 (1392)
++||||+.. ...|+|+||+++++..++++|+++++++||. ..+++|
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~-~~~~~~ 157 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAF-AEPLAV 157 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHh-hcHHHH
Confidence 479999742 1258999999999999999999999987664 457899
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHH
Q psy1119 553 AVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVM 631 (1392)
Q Consensus 553 A~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~ 631 (1392)
||+++.. ....+|++|||+|+ |++|++++|+|+++|+ +|++++.+++|++++++ +|+++++|+++.++.+ +.
T Consensus 158 a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~-~~ 230 (343)
T PRK09880 158 AIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLARE----MGADKLVNPQNDDLDH-YK 230 (343)
T ss_pred HHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHH----cCCcEEecCCcccHHH-Hh
Confidence 9999854 45668999999965 9999999999999999 58899999999999876 7899999988777654 32
Q ss_pred HHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCcccc-ccccCCCcEEEEEechhhhhhCHHHHHHHH
Q psy1119 632 KRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVMLDNFFFAEQEWKMSLQ 709 (1392)
Q Consensus 632 ~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~ 709 (1392)
+. .| ++|+|||++++ ..+..++++++++|+++.+|..... ..+. ..++.+++++.|..... ..+
T Consensus 231 ~~-~g-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~--~~~~~~~~~~k~~~i~g~~~~~----------~~~ 296 (343)
T PRK09880 231 AE-KG-YFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAP--PEFPMMTLIVKEISLKGSFRFT----------EEF 296 (343)
T ss_pred cc-CC-CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC--CccCHHHHHhCCcEEEEEeecc----------ccH
Confidence 22 22 69999999986 5788999999999999999964321 1122 24557888888864311 123
Q ss_pred HHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 710 KALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 710 ~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
..+.+++++|.++| +++++|+++|+++||+.+.+++..||+||.+
T Consensus 297 ~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 297 NTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred HHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 45567888999886 6789999999999999999998889999864
|
|
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-30 Score=311.56 Aligned_cols=290 Identities=18% Similarity=0.257 Sum_probs=234.7
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~-------- 506 (1392)
.+++.+.|.|. ++++||+|||.++|||+.|++...|..+.. ..|.++|||++|+|++
T Consensus 14 ~~~l~~~~~p~--------~~~~evlIkv~a~gi~~~D~~~~~g~~~~~-------~~p~i~G~e~~G~V~~vG~~v~~~ 78 (369)
T cd08301 14 PLVIEEVEVAP--------PQAMEVRIKILHTSLCHTDVYFWEAKGQTP-------LFPRILGHEAAGIVESVGEGVTDL 78 (369)
T ss_pred CcEEEEeeCCC--------CCCCeEEEEEEEEeeCchhHHHhcCCCCCC-------CCCcccccccceEEEEeCCCCCcc
Confidence 37778888765 689999999999999999999998876422 2367999999999873
Q ss_pred -CCCeEEEee-------------------------------------------------cCCcccceEEecccceEEcCC
Q psy1119 507 -SGKRVMGLT-------------------------------------------------SGRSLANCCETDVEMAWEIPD 536 (1392)
Q Consensus 507 -vGdrV~gl~-------------------------------------------------~~g~~a~~v~~~~~~~~~iPd 536 (1392)
+||||+.+. ..|+|+||+.+++..++++|+
T Consensus 79 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~ 158 (369)
T cd08301 79 KPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINP 158 (369)
T ss_pred ccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCC
Confidence 688997641 126899999999999999999
Q ss_pred CCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCc
Q psy1119 537 QWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKE 615 (1392)
Q Consensus 537 ~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~ 615 (1392)
++++++||+++++++|||+++...+++++|++|||+| +|++|++++|+|+.+|+ +|++++++++|++++++ +++
T Consensus 159 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~----~Ga 233 (369)
T cd08301 159 EAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFG-LGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKK----FGV 233 (369)
T ss_pred CCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCC
Confidence 9999999999999999999998889999999999996 59999999999999999 79999999999999976 678
Q ss_pred CceeeCCC--ccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCC-eEEEEEcccccccCccccccccCCCcEEEE
Q psy1119 616 ENIGNSRD--TSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQG-GRFLEIGKFDLANNNMLGMEVFMRETSFHG 691 (1392)
Q Consensus 616 ~~i~~s~~--~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~-Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g 691 (1392)
+.+++..+ .++.+.+++.+++ |+|+|||++++ ..+..++++++++ |+++.+|.........+....+.+++++.|
T Consensus 234 ~~~i~~~~~~~~~~~~v~~~~~~-~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g 312 (369)
T cd08301 234 TEFVNPKDHDKPVQEVIAEMTGG-GVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKG 312 (369)
T ss_pred ceEEcccccchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEE
Confidence 88888765 4677888888876 89999999975 4688899999996 999999975422111222222346899998
Q ss_pred EechhhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEE
Q psy1119 692 VMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI 752 (1392)
+....+.. +.....+.+++.+|.+++ +++++|+++|+++||+.+.+++.+ |+||
T Consensus 313 ~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 313 TLFGGYKP------KTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred EecCCCCh------HHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 76543211 112334556777887765 578999999999999999998865 8876
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >PLN02514 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-30 Score=308.57 Aligned_cols=294 Identities=16% Similarity=0.228 Sum_probs=233.9
Q ss_pred eccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee
Q psy1119 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD 506 (1392)
Q Consensus 427 ~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~ 506 (1392)
...+| ..+...+.+.|. ++++||+|||.|+|+|+.|++...|.++.. ..|.++|||++|+|++
T Consensus 15 ~~~~~--~~~~~~~~~~p~--------~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~-------~~p~i~G~E~~G~Vv~ 77 (357)
T PLN02514 15 ARDPS--GHLSPYTYTLRK--------TGPEDVVIKVIYCGICHTDLHQIKNDLGMS-------NYPMVPGHEVVGEVVE 77 (357)
T ss_pred EecCC--CCceEEeecCCC--------CCCCcEEEEEEEeccChHHHHhhcCCcCcC-------CCCccCCceeeEEEEE
Confidence 33444 446777777765 689999999999999999999998865321 1367899999999873
Q ss_pred ---------CCCeEEE-e----------------------------------ecCCcccceEEecccceEEcCCCCCHhh
Q psy1119 507 ---------SGKRVMG-L----------------------------------TSGRSLANCCETDVEMAWEIPDQWTLED 542 (1392)
Q Consensus 507 ---------vGdrV~g-l----------------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~ 542 (1392)
+||+|+. . ...|+|++|+.+++..++++|+++++++
T Consensus 78 vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~ 157 (357)
T PLN02514 78 VGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQ 157 (357)
T ss_pred ECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHH
Confidence 6888863 1 1248999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCC
Q psy1119 543 AATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSR 622 (1392)
Q Consensus 543 AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~ 622 (1392)
||++++++.|||+++...+.+++|++|+|+ |+|++|++++|+|+++|++|++++++++|++.+.+. ++++++++..
T Consensus 158 aa~l~~~~~ta~~al~~~~~~~~g~~vlV~-G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~---~Ga~~~i~~~ 233 (357)
T PLN02514 158 AAPLLCAGVTVYSPLSHFGLKQSGLRGGIL-GLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEH---LGADDYLVSS 233 (357)
T ss_pred hhhhhhhHHHHHHHHHHcccCCCCCeEEEE-cccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHh---cCCcEEecCC
Confidence 999999999999999877777899999999 569999999999999999999999888888777664 5677777655
Q ss_pred CccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhC
Q psy1119 623 DTSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAE 701 (1392)
Q Consensus 623 ~~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~ 701 (1392)
+. +.+.+.+. |+|+|||+++. ..+..++++++++|+++.+|..... .......++.+++++.|.....
T Consensus 234 ~~---~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~~~~~----- 302 (357)
T PLN02514 234 DA---AEMQEAAD--SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTP-LQFVTPMLMLGRKVITGSFIGS----- 302 (357)
T ss_pred Ch---HHHHHhcC--CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCC-CcccHHHHhhCCcEEEEEecCC-----
Confidence 43 34555553 79999999985 5788999999999999999975321 1111223556888998875433
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEecCC
Q psy1119 702 QEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDE 757 (1392)
Q Consensus 702 ~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~~ 757 (1392)
. ..+..+.+++.+|.+++++ ++|+++|+.+||+.+.+++..||+||.+...
T Consensus 303 ~----~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~~ 353 (357)
T PLN02514 303 M----KETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAGS 353 (357)
T ss_pred H----HHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEcccc
Confidence 1 1234455678889898876 5899999999999999999999999988643
|
|
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-30 Score=301.97 Aligned_cols=312 Identities=26% Similarity=0.401 Sum_probs=255.2
Q ss_pred eccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee
Q psy1119 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD 506 (1392)
Q Consensus 427 ~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~ 506 (1392)
...+|....+.|.+.+.+. +.+++++|+|.++|+|+.|+....|.++.. ...+.++|+|++|+|.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~--------~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~------~~~~~~~g~e~~G~v~~ 72 (334)
T PTZ00354 7 LKGFGGVDVLKIGESPKPA--------PKRNDVLIKVSAAGVNRADTLQRQGKYPPP------PGSSEILGLEVAGYVED 72 (334)
T ss_pred EEecCCCcceEEEeCCCCC--------CCCCEEEEEEEEEecCHHHHHHhCCCCCCC------CCCCcccceeeEEEEEE
Confidence 4556777778888877653 688999999999999999999998866422 01245899999999873
Q ss_pred ---------CCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCch
Q psy1119 507 ---------SGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGG 577 (1392)
Q Consensus 507 ---------vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~Gg 577 (1392)
+||+|+++...|++++|+.++...++++|+++++++++.+++++.|||+++...+++++|++|||||++|+
T Consensus 73 vG~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ 152 (334)
T PTZ00354 73 VGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASG 152 (334)
T ss_pred eCCCCCCCCCCCEEEEecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCch
Confidence 68899988666899999999999999999999999999999999999999988899999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCcc-HHHHHHHHcCCCcceEEEecCchhHHHHHHh
Q psy1119 578 VGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTS-FEQLVMKRTKGRGVDLVLNSLAEEKLQASVR 656 (1392)
Q Consensus 578 VG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~-~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~ 656 (1392)
+|++++++|+++|++++++++++++++++++ ++.+++++....+ +.+.+++.++++|+|++||+.+++.+..+++
T Consensus 153 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~ 228 (334)
T PTZ00354 153 VGTAAAQLAEKYGAATIITTSSEEKVDFCKK----LAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAE 228 (334)
T ss_pred HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHH
Confidence 9999999999999999989999999999965 5668899887765 8888999998899999999999889999999
Q ss_pred cccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechh-hhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccH
Q psy1119 657 CLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDN-FFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKV 734 (1392)
Q Consensus 657 ~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~-~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev 734 (1392)
+++++|+++.+|.........+.+ ..+.++.++.+..... .....+.....+.+.+.+++.+|.+.+.+.++|+++++
T Consensus 229 ~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 308 (334)
T PTZ00354 229 VLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEV 308 (334)
T ss_pred HhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHH
Confidence 999999999998532211111222 2344666777765433 11122333345556666788899998888899999999
Q ss_pred HHHHHHHHcCCccceEEEEecC
Q psy1119 735 EEAFRYMAAGKHIGKVIIKIRD 756 (1392)
Q Consensus 735 ~eA~~~l~~g~~~GKvVI~~~~ 756 (1392)
+++|+.+.+++..||+|+++.+
T Consensus 309 ~~~~~~~~~~~~~~kvvv~~~~ 330 (334)
T PTZ00354 309 AEAHTFLEQNKNIGKVVLTVNE 330 (334)
T ss_pred HHHHHHHHhCCCCceEEEecCC
Confidence 9999999999889999998854
|
|
| >TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-30 Score=305.64 Aligned_cols=297 Identities=21% Similarity=0.278 Sum_probs=240.4
Q ss_pred CCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee----
Q psy1119 431 GDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD---- 506 (1392)
Q Consensus 431 G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~---- 506 (1392)
|+++.++..+.|.|. +.++||+|+|.++|+|+.|+....|..+.. ..|.++|+|++|+|.+
T Consensus 12 ~~~~~~~~~~~~~p~--------~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~-------~~~~~~g~e~~G~V~~vG~~ 76 (336)
T TIGR02817 12 TDPDALVDIDLPKPK--------PGGRDLLVEVKAISVNPVDTKVRARMAPEA-------GQPKILGWDAAGVVVAVGDE 76 (336)
T ss_pred CCcccceecccCCCC--------CCCCEEEEEEEEEEcChHHHHHHcCCCCCC-------CCCcccceeeEEEEEEeCCC
Confidence 777888888888875 689999999999999999999988865422 1256899999999873
Q ss_pred -----CCCeEEEee---cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCC-----CCEEEEEc
Q psy1119 507 -----SGKRVMGLT---SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQK-----GESILIHA 573 (1392)
Q Consensus 507 -----vGdrV~gl~---~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~-----GetVLI~g 573 (1392)
+||+|+++. ..|+|++|+.++++.++++|+++++++||++|++++|||+++...+++++ |++|||||
T Consensus 77 v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g 156 (336)
T TIGR02817 77 VTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIG 156 (336)
T ss_pred CCCCCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEc
Confidence 688998864 25899999999999999999999999999999999999999988899887 99999999
Q ss_pred CCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecC-chhHH
Q psy1119 574 GSGGVGQAAINLARYM-DAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSL-AEEKL 651 (1392)
Q Consensus 574 a~GgVG~aaIqlA~~~-Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~-~~~~l 651 (1392)
|+|++|++++|+|+.+ |++|+++++++++++++++ ++.+++++... ++.+.+++. .++++|+|+|+. +++..
T Consensus 157 a~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~----~g~~~~~~~~~-~~~~~i~~~-~~~~vd~vl~~~~~~~~~ 230 (336)
T TIGR02817 157 GAGGVGSILIQLARQLTGLTVIATASRPESQEWVLE----LGAHHVIDHSK-PLKAQLEKL-GLEAVSYVFSLTHTDQHF 230 (336)
T ss_pred CCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHH----cCCCEEEECCC-CHHHHHHHh-cCCCCCEEEEcCCcHHHH
Confidence 9999999999999998 9999999999999999965 56789998544 677778774 556899999987 45788
Q ss_pred HHHHhcccCCeEEEEEcccccccCcccccccc-CCCcEEEEEech-hhhhhCHHHH--HHHHHHHHHHHHcCCCCCccee
Q psy1119 652 QASVRCLAQGGRFLEIGKFDLANNNMLGMEVF-MRETSFHGVMLD-NFFFAEQEWK--MSLQKALQKAIDAGAVQPLVRT 727 (1392)
Q Consensus 652 ~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~-~k~~s~~g~~~~-~~~~~~~~~~--~~~~~~~~~~l~~g~l~pl~~~ 727 (1392)
..+++|++++|+++.++... ...+..+ .+++++.+..+. ......+... ...++.+.+++.+|.+++.+.+
T Consensus 231 ~~~~~~l~~~G~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~ 305 (336)
T TIGR02817 231 KEIVELLAPQGRFALIDDPA-----ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAE 305 (336)
T ss_pred HHHHHHhccCCEEEEEcccc-----cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchh
Confidence 89999999999999886321 1222223 355777765433 1111222222 2456777788999999887666
Q ss_pred eec---cccHHHHHHHHHcCCccceEEEE
Q psy1119 728 IFP---EDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 728 vf~---l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
.|+ ++++++||+.+.+++..||+|+.
T Consensus 306 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 306 TFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred ccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 665 68999999999999999998864
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. |
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-30 Score=302.07 Aligned_cols=303 Identities=16% Similarity=0.224 Sum_probs=242.7
Q ss_pred ccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--
Q psy1119 428 LVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-- 505 (1392)
Q Consensus 428 ~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-- 505 (1392)
..+|+++.+++.+.|.|. +.+++|+|+|.++|+|++|++...|.++.. ...|.++|||++|+|+
T Consensus 7 ~~~~~~~~~~~~~~~~p~--------~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~------~~~~~~~g~e~~G~v~~~ 72 (325)
T cd05280 7 EEQDGGVSLFLRTLPLDD--------LPEGDVLIRVHYSSLNYKDALAATGNGGVT------RNYPHTPGIDAAGTVVSS 72 (325)
T ss_pred cccCCCCcceEEeCCCCC--------CCCCeEEEEEEEeecChHHHHHhcCCCCCC------CCCCCccCcccEEEEEEe
Confidence 456666788999988875 688999999999999999999998876422 1125689999999987
Q ss_pred -----eCCCeEEEee------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCC--C-CCCEEEE
Q psy1119 506 -----DSGKRVMGLT------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQM--Q-KGESILI 571 (1392)
Q Consensus 506 -----~vGdrV~gl~------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l--~-~GetVLI 571 (1392)
++||+|++.. ..|++++|+.+++..++++|+++++++||.+++++.|||+++....+. . .|++|+|
T Consensus 73 ~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI 152 (325)
T cd05280 73 DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLV 152 (325)
T ss_pred CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEE
Confidence 4799998753 358999999999999999999999999999999999999998765543 5 4679999
Q ss_pred EcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHH
Q psy1119 572 HAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKL 651 (1392)
Q Consensus 572 ~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l 651 (1392)
||++|++|++++|+|+.+|++|+++++++++++++++ ++++++++.++.. ..+.+.+.++++|+|||+++++.+
T Consensus 153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~--~~~~~~~~~~~~d~vi~~~~~~~~ 226 (325)
T cd05280 153 TGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKS----LGASEVLDREDLL--DESKKPLLKARWAGAIDTVGGDVL 226 (325)
T ss_pred ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCcEEEcchhHH--HHHHHHhcCCCccEEEECCchHHH
Confidence 9999999999999999999999999999999999965 5678888876532 234455556789999999999899
Q ss_pred HHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeecc
Q psy1119 652 QASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPE 731 (1392)
Q Consensus 652 ~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l 731 (1392)
..++++++++|+++.+|..+...........+.+++++.++..... .++....+.+.+..++..+ +.+.+.++|++
T Consensus 227 ~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 302 (325)
T cd05280 227 ANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNC---PMELRKQVWQKLATEWKPD-LLEIVVREISL 302 (325)
T ss_pred HHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecC---chhHHHHHHHHHHHHHhcC-CccceeeEecH
Confidence 9999999999999999976433221111233468899998765432 1223334555566666666 44457889999
Q ss_pred ccHHHHHHHHHcCCccceEEEEe
Q psy1119 732 DKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 732 ~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+++++||+.+.++++.||+|+++
T Consensus 303 ~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 303 EELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred HHHHHHHHHHhcCCcceEEEEeC
Confidence 99999999999999999999863
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-30 Score=300.30 Aligned_cols=296 Identities=21% Similarity=0.282 Sum_probs=244.0
Q ss_pred ccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--
Q psy1119 428 LVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-- 505 (1392)
Q Consensus 428 ~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-- 505 (1392)
..++.+..+.+.+.+.+. +.+++++|+|.++|+|+.|+....|.++.. ..|.++|+|++|+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~--------~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-------~~~~~~g~e~~G~v~~v 71 (320)
T cd08243 7 EQPGGPEVLKLREIPIPE--------PKPGWVLIRVKAFGLNRSEIFTRQGHSPSV-------KFPRVLGIEAVGEVEEA 71 (320)
T ss_pred cCCCCccceEEeecCCCC--------CCCCEEEEEEEEEecCHHHHHHhcCCCCCC-------CCCccccceeEEEEEEe
Confidence 345666677887777653 689999999999999999999988865432 125789999999987
Q ss_pred -----eCCCeEEEeec------CCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcC
Q psy1119 506 -----DSGKRVMGLTS------GRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAG 574 (1392)
Q Consensus 506 -----~vGdrV~gl~~------~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga 574 (1392)
++||+|+++.. .|+|++|+.+++..++++|++++++++|++++++.|||+++...+++++|++|||||+
T Consensus 72 G~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga 151 (320)
T cd08243 72 PGGTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGG 151 (320)
T ss_pred cCCCCCCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 47899998753 3899999999999999999999999999999999999999998889999999999999
Q ss_pred CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHH
Q psy1119 575 SGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQAS 654 (1392)
Q Consensus 575 ~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s 654 (1392)
+|++|++++|+|+++|++|+++++++++++++++ ++.+++++. ..++.+.+++. ++|+|+++|+.++..+..+
T Consensus 152 ~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~-~~~~~~~i~~~--~~~~d~vl~~~~~~~~~~~ 224 (320)
T cd08243 152 TSSVGLAALKLAKALGATVTATTRSPERAALLKE----LGADEVVID-DGAIAEQLRAA--PGGFDKVLELVGTATLKDS 224 (320)
T ss_pred CChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCcEEEec-CccHHHHHHHh--CCCceEEEECCChHHHHHH
Confidence 9999999999999999999999999999999965 567888765 45777888877 6799999999998889999
Q ss_pred HhcccCCeEEEEEccccccc----CccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeec
Q psy1119 655 VRCLAQGGRFLEIGKFDLAN----NNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFP 730 (1392)
Q Consensus 655 ~~~La~~Gr~v~iG~~~~~~----~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~ 730 (1392)
+++++++|+++.+|...... .....+..+.+++++.++...... ...++.+.+++.++.+++.+.++|+
T Consensus 225 ~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (320)
T cd08243 225 LRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVP-------QTPLQELFDFVAAGHLDIPPSKVFT 297 (320)
T ss_pred HHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhh-------HHHHHHHHHHHHCCceecccccEEc
Confidence 99999999999998642211 111222334677888777543221 2344555677888999888888999
Q ss_pred cccHHHHHHHHHcCCccceEEE
Q psy1119 731 EDKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 731 l~ev~eA~~~l~~g~~~GKvVI 752 (1392)
++++++||+.+.++++.||+|+
T Consensus 298 l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 298 FDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred HHHHHHHHHHHHhCCCCCcEEe
Confidence 9999999999999999999875
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-30 Score=306.19 Aligned_cols=288 Identities=17% Similarity=0.183 Sum_probs=231.1
Q ss_pred ceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------C
Q psy1119 436 LTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD--------S 507 (1392)
Q Consensus 436 l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~--------v 507 (1392)
+++.+.|.|. ++++||+|||.++|+|++|+....+..... ...|.++|||++|+|++ +
T Consensus 11 ~~~~~~p~P~--------~~~~evlVrv~~~gic~sD~~~~~~~~~~~------~~~p~i~GhE~~G~V~~vG~~v~~~~ 76 (349)
T TIGR03201 11 MVKTRVEIPE--------LGAGDVVVKVAGCGVCHTDLSYYYMGVRTN------HALPLALGHEISGRVIQAGAGAASWI 76 (349)
T ss_pred ceEEeccCCC--------CCCCeEEEEEEEEeecccchHHHcCCCCcc------CCCCeeccccceEEEEEeCCCcCCCC
Confidence 7788888875 689999999999999999999874332211 12367999999999975 5
Q ss_pred CCeEEEe---------------------------ecCCcccceEEecccceEEcCC------CCCHhhHhhhhHHHHHHH
Q psy1119 508 GKRVMGL---------------------------TSGRSLANCCETDVEMAWEIPD------QWTLEDAATVPCVYATAV 554 (1392)
Q Consensus 508 GdrV~gl---------------------------~~~g~~a~~v~~~~~~~~~iPd------~ls~e~AA~lp~~~~TA~ 554 (1392)
||+|+.. ...|+|++|+.++++.++++|+ +++++++|++++++.|+|
T Consensus 77 GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~ 156 (349)
T TIGR03201 77 GKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPY 156 (349)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHH
Confidence 7788651 1258999999999999999999 899999999999999999
Q ss_pred HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCc---cHHHHHH
Q psy1119 555 YAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDT---SFEQLVM 631 (1392)
Q Consensus 555 ~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~---~~~~~i~ 631 (1392)
+++. .+++++|++|+|+|+ |++|++++|+|+++|++|++++.+++|++++++ +++++++++.+. ++.+.++
T Consensus 157 ~a~~-~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~----~Ga~~~i~~~~~~~~~~~~~~~ 230 (349)
T TIGR03201 157 QAAV-QAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKG----FGADLTLNPKDKSAREVKKLIK 230 (349)
T ss_pred HHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH----hCCceEecCccccHHHHHHHHH
Confidence 9985 578999999999988 999999999999999999999999999999975 678889987664 5778888
Q ss_pred HHcCCCcce----EEEecCchh-HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHH
Q psy1119 632 KRTKGRGVD----LVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKM 706 (1392)
Q Consensus 632 ~~T~g~GvD----vVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~ 706 (1392)
+.|+++|+| +|||+.++. .++.++++++++|+++.+|...... ......++.++.++.|..... ++
T Consensus 231 ~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~~~~~~~g~~~~~-----~~--- 301 (349)
T TIGR03201 231 AFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKT-EYRLSNLMAFHARALGNWGCP-----PD--- 301 (349)
T ss_pred hhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCc-ccCHHHHhhcccEEEEEecCC-----HH---
Confidence 899999997 899999864 5778999999999999999753211 111123445667777754211 11
Q ss_pred HHHHHHHHHHHcCCCCCc-ceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 707 SLQKALQKAIDAGAVQPL-VRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 707 ~~~~~~~~~l~~g~l~pl-~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
....+.+++++|.+++. ..++|+++++++||+.+.+++..||++++
T Consensus 302 -~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~ 348 (349)
T TIGR03201 302 -RYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILT 348 (349)
T ss_pred -HHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHHHcCCccceEEec
Confidence 23445677889988762 33579999999999999999999999875
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-30 Score=300.62 Aligned_cols=308 Identities=20% Similarity=0.248 Sum_probs=248.6
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
+....+|.+..+.+.+.+.|. +.++||+|+|.++|+|+.|+.+..|.++... .|.++|+|++|+|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~--------~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~-------~~~~~g~e~~G~v 69 (327)
T PRK10754 5 IEFHKHGGPEVLQAVEFTPAD--------PAENEVQVENKAIGINYIDTYIRSGLYPPPS-------LPSGLGTEAAGVV 69 (327)
T ss_pred EEEeccCChhHeEEeeccCCC--------CCCCEEEEEEEEEEcCHHHhhhcCCCCCCCC-------CCCccCcceEEEE
Confidence 344567888899999988775 6899999999999999999999888765321 2568999999998
Q ss_pred e---------eCCCeEEEee-cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcC
Q psy1119 505 R---------DSGKRVMGLT-SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAG 574 (1392)
Q Consensus 505 ~---------~vGdrV~gl~-~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga 574 (1392)
. ++||+|..+. ..|+|++|+.++...++++|++++++++++++++++|||+++...+++++|++|+||||
T Consensus 70 ~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~ 149 (327)
T PRK10754 70 SKVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAA 149 (327)
T ss_pred EEeCCCCCCCCCCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeC
Confidence 6 3578887653 34789999999999999999999999999999999999999988899999999999999
Q ss_pred CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHH
Q psy1119 575 SGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQAS 654 (1392)
Q Consensus 575 ~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s 654 (1392)
+|++|++++|+|+.+|++|+++++++++++++++ ++.+++++.++.++.+.+++.++++|+|++||+.++.....+
T Consensus 150 ~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~ 225 (327)
T PRK10754 150 AGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKK----AGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEAS 225 (327)
T ss_pred CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----CCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHH
Confidence 9999999999999999999999999999999965 566889998888899999999999999999999998888899
Q ss_pred HhcccCCeEEEEEcccccccCccccccccCC-CcEEE-EEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCc--ceeeec
Q psy1119 655 VRCLAQGGRFLEIGKFDLANNNMLGMEVFMR-ETSFH-GVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPL--VRTIFP 730 (1392)
Q Consensus 655 ~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k-~~s~~-g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl--~~~vf~ 730 (1392)
+++++++|+++.+|...... ....+..+.+ +..+. ......+ ...++........+.+++.+|.+++. ..++|+
T Consensus 226 ~~~l~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~ 303 (327)
T PRK10754 226 LDCLQRRGLMVSFGNASGPV-TGVNLGILNQKGSLYVTRPSLQGY-ITTREELTEASNELFSLIASGVIKVDVAEQQKFP 303 (327)
T ss_pred HHHhccCCEEEEEccCCCCC-CCcCHHHHhccCceEEecceeecc-cCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEc
Confidence 99999999999999654211 1112222222 21111 1111111 12233344455566788899998853 578999
Q ss_pred cccHHHHHHHHHcCCccceEEEE
Q psy1119 731 EDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 731 l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
++++.+||+.+.+++..||+||.
T Consensus 304 ~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 304 LKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred HHHHHHHHHHHHcCCCcceEEEe
Confidence 99999999999999999999985
|
|
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-30 Score=307.06 Aligned_cols=300 Identities=20% Similarity=0.268 Sum_probs=237.2
Q ss_pred eccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee
Q psy1119 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD 506 (1392)
Q Consensus 427 ~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~ 506 (1392)
...+| +.+++.+.+.|. +.++||+|+|.|+|+|+.|++...|.++.. ..|.++|||++|+|.+
T Consensus 6 ~~~~~--~~l~~~~~~~p~--------~~~~evlV~v~a~~l~~~d~~~~~g~~~~~-------~~p~~~G~e~~G~V~~ 68 (361)
T cd08231 6 LTGPG--KPLEIREVPLPD--------LEPGAVLVRVRLAGVCGSDVHTVAGRRPRV-------PLPIILGHEGVGRVVA 68 (361)
T ss_pred EcCCC--CCCEEEeccCCC--------CCCCeEEEEEEEEeecCccHHHhcCCCCCC-------CCCcccccCCceEEEE
Confidence 33444 468899988875 689999999999999999999999976521 1367999999999863
Q ss_pred ---------------CCCeEEEee----------------------------------cCCcccceEEeccc-ceEEcCC
Q psy1119 507 ---------------SGKRVMGLT----------------------------------SGRSLANCCETDVE-MAWEIPD 536 (1392)
Q Consensus 507 ---------------vGdrV~gl~----------------------------------~~g~~a~~v~~~~~-~~~~iPd 536 (1392)
+||+|+.+. ..|+|++|+.+++. .++++|+
T Consensus 69 vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~ 148 (361)
T cd08231 69 LGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPD 148 (361)
T ss_pred eCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCC
Confidence 478887651 24899999999996 7999999
Q ss_pred CCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCc
Q psy1119 537 QWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKE 615 (1392)
Q Consensus 537 ~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~ 615 (1392)
++++++|++++++++|||+++...+.+++|++|||+| +|++|++++|+|+.+|+ +|+++++++++.+++++ ++.
T Consensus 149 ~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~----~g~ 223 (361)
T cd08231 149 NVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELARE----FGA 223 (361)
T ss_pred CCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCC
Confidence 9999999999999999999998887778999999995 69999999999999999 99999999999988865 677
Q ss_pred CceeeCCCccHH---HHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccc-cccCCCcEEE
Q psy1119 616 ENIGNSRDTSFE---QLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFH 690 (1392)
Q Consensus 616 ~~i~~s~~~~~~---~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~ 690 (1392)
+++++.++.++. ..+++.++++|+|+|||+.++ ..+..++++++++|+++.+|..+......+.. .++.+++++.
T Consensus 224 ~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 303 (361)
T cd08231 224 DATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTII 303 (361)
T ss_pred CeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEE
Confidence 888887765443 578889998999999999875 57889999999999999999654211111221 2367889988
Q ss_pred EEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 691 GVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 691 g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
++.... ++...+.++.+.+......+.++++++|+++++++||+.+.++.. +|+||++
T Consensus 304 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 304 GVHNYD-----PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred EcccCC-----chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 875422 222333444443333333456678899999999999999988875 7998853
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=304.92 Aligned_cols=288 Identities=18% Similarity=0.243 Sum_probs=230.7
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~-------- 506 (1392)
.+++.+.|.|. +.+++|+|||.++|+|+.|++...|.++.. .|.++|||++|+|++
T Consensus 14 ~~~~~~~~~p~--------~~~~evlVkv~~~gi~~sD~~~~~g~~~~~--------~p~i~G~e~~G~V~~vG~~v~~~ 77 (365)
T cd08277 14 PLVIEEIEVAP--------PKANEVRIKMLATSVCHTDILAIEGFKATL--------FPVILGHEGAGIVESVGEGVTNL 77 (365)
T ss_pred CcEEEEEECCC--------CCCCEEEEEEEEEeechhhHHHhcCCCCCC--------CCeecccceeEEEEeeCCCCccC
Confidence 47778887775 689999999999999999999998876421 367999999999873
Q ss_pred -CCCeEEEee-----------------------------------------------cCCcccceEEecccceEEcCCCC
Q psy1119 507 -SGKRVMGLT-----------------------------------------------SGRSLANCCETDVEMAWEIPDQW 538 (1392)
Q Consensus 507 -vGdrV~gl~-----------------------------------------------~~g~~a~~v~~~~~~~~~iPd~l 538 (1392)
+||+|++.. ..|+|+||+.+++..++++|+++
T Consensus 78 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l 157 (365)
T cd08277 78 KPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA 157 (365)
T ss_pred CCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCC
Confidence 688887641 13789999999999999999999
Q ss_pred CHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCc
Q psy1119 539 TLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEEN 617 (1392)
Q Consensus 539 s~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~ 617 (1392)
++++||+++++++|||+++...+++++|++|||+| +|++|++++|+|+++|+ +|+++.++++|++++++ +++++
T Consensus 158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~ 232 (365)
T cd08277 158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKE----FGATD 232 (365)
T ss_pred CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH----cCCCc
Confidence 99999999999999999988889999999999995 69999999999999999 69999999999999965 67899
Q ss_pred eeeCCCc--cHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCC-eEEEEEcccccccCccccccccCCCcEEEEEe
Q psy1119 618 IGNSRDT--SFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQG-GRFLEIGKFDLANNNMLGMEVFMRETSFHGVM 693 (1392)
Q Consensus 618 i~~s~~~--~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~-Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~ 693 (1392)
+++.++. ++.+.+++.++ +|+|+|||++++ ..+..++++++++ |+++.+|....... .+....+.+++++.|+.
T Consensus 233 ~i~~~~~~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~g~~ 310 (365)
T cd08277 233 FINPKDSDKPVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAEL-SIRPFQLILGRTWKGSF 310 (365)
T ss_pred EeccccccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCcccc-ccCHhHHhhCCEEEeee
Confidence 9988763 46778888887 699999999984 6778999999885 99999997542111 12221222378888875
Q ss_pred chhhhhhCHHHHHHHHHHHHHHHHcCCCC--CcceeeeccccHHHHHHHHHcCCccceEEE
Q psy1119 694 LDNFFFAEQEWKMSLQKALQKAIDAGAVQ--PLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI 752 (1392)
...+.. . .....+.+++.+|.++ ++++++|+++|+++||+.+.+++. .|+++
T Consensus 311 ~~~~~~--~----~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i 364 (365)
T cd08277 311 FGGFKS--R----SDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVI 364 (365)
T ss_pred cCCCCh--H----HHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEee
Confidence 543211 1 1123445667777644 578899999999999999988874 58876
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i |
| >TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=297.36 Aligned_cols=304 Identities=15% Similarity=0.211 Sum_probs=243.6
Q ss_pred eeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
.+.+.|.+..+++.+.|.|. +.+++|+|+|.++|+|+.|+....|.++.. ...|.++|+|++|+|.
T Consensus 4 ~~~~~~~~~~~~~~~~~~p~--------~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~------~~~~~~~g~e~~G~V~ 69 (323)
T TIGR02823 4 VVEKEDGKVSAQVETLDLSD--------LPEGDVLIKVAYSSLNYKDALAITGKGGVV------RSYPMIPGIDAAGTVV 69 (323)
T ss_pred EEccCCCCcceeEeecCCCC--------CCCCeEEEEEEEEEcCHHHHHHHcCCCCCC------CCCCccceeeeEEEEE
Confidence 34456667788999998875 689999999999999999999998876421 1126789999999986
Q ss_pred -------eCCCeEEEee------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHh--cCCCCCC-EE
Q psy1119 506 -------DSGKRVMGLT------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFIC--GQMQKGE-SI 569 (1392)
Q Consensus 506 -------~vGdrV~gl~------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~--a~l~~Ge-tV 569 (1392)
++||+|+++. ..|++++|+.+++..++++|+++++++|+++++.+.||++++... +++.+|+ +|
T Consensus 70 ~~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~v 149 (323)
T TIGR02823 70 SSEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPV 149 (323)
T ss_pred ecCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceE
Confidence 3799998864 358999999999999999999999999999999999999887544 3488999 99
Q ss_pred EEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchh
Q psy1119 570 LIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEE 649 (1392)
Q Consensus 570 LI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~ 649 (1392)
+|||++|++|++++|+|+++|++|+++++++++++++++ ++.+++++.++.++ .++..+.+ ++|+++|+++++
T Consensus 150 lI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~--~~~~~~~~-~~d~vld~~g~~ 222 (323)
T TIGR02823 150 LVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKE----LGASEVIDREDLSP--PGKPLEKE-RWAGAVDTVGGH 222 (323)
T ss_pred EEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHh----cCCcEEEccccHHH--HHHHhcCC-CceEEEECccHH
Confidence 999999999999999999999999999999999999965 56688888766544 44555554 599999999988
Q ss_pred HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeee
Q psy1119 650 KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIF 729 (1392)
Q Consensus 650 ~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf 729 (1392)
.+..+++|++++|+++.+|.............++.+++++.++.+.... ......+.+.+.+++..+.+.+. .++|
T Consensus 223 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 298 (323)
T TIGR02823 223 TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCP---MALREAAWQRLATDLKPRNLESI-TREI 298 (323)
T ss_pred HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccC---chhHHHHHHHHHHHhhcCCCcCc-eeee
Confidence 8899999999999999999653221111112344789999997654211 12233455556667778887765 5689
Q ss_pred ccccHHHHHHHHHcCCccceEEEEe
Q psy1119 730 PEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 730 ~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+++++++||+.+.++++.||+|+++
T Consensus 299 ~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 299 TLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred cHHHHHHHHHHHhCCCccceEEEeC
Confidence 9999999999999999999998763
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc. |
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-29 Score=292.73 Aligned_cols=304 Identities=22% Similarity=0.293 Sum_probs=255.8
Q ss_pred ccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--
Q psy1119 428 LVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-- 505 (1392)
Q Consensus 428 ~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-- 505 (1392)
..+|.+..+.|.+.+.+. +.+++++|+|.++|+|+.|++...|.++.. .|.++|+|++|+|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~--------~~~~~v~i~v~~~~i~~~d~~~~~~~~~~~--------~~~~~g~e~~G~v~~~ 69 (320)
T cd05286 6 HKTGGPEVLEYEDVPVPE--------PGPGEVLVRNTAIGVNFIDTYFRSGLYPLP--------LPFVLGVEGAGVVEAV 69 (320)
T ss_pred ecCCCccceEEeecCCCC--------CCCCEEEEEEEEeecCHHHHHHhcCCCCCC--------CCccCCcceeEEEEEE
Confidence 456666778888776653 689999999999999999999988866431 25689999999986
Q ss_pred -------eCCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Q psy1119 506 -------DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGV 578 (1392)
Q Consensus 506 -------~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgV 578 (1392)
++||+|+++...|++++|+.++.+.++++|+++++++++++++.++++++++...+++++|++|||||++|++
T Consensus 70 g~~~~~~~~G~~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~ 149 (320)
T cd05286 70 GPGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGV 149 (320)
T ss_pred CCCCCCCCCCCEEEEecCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Confidence 3678898875247899999999999999999999999999999999999999888999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcc
Q psy1119 579 GQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCL 658 (1392)
Q Consensus 579 G~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~L 658 (1392)
|++++++|+.+|++|+++++++++++++++ ++.+++++.++.++.+.+++.++++|+|+++|++++.....+++++
T Consensus 150 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l 225 (320)
T cd05286 150 GLLLTQWAKALGATVIGTVSSEEKAELARA----AGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSL 225 (320)
T ss_pred HHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----CCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhh
Confidence 999999999999999999999999999965 4668899988888989999999889999999999888889999999
Q ss_pred cCCeEEEEEcccccccCcccccccc-CCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHH
Q psy1119 659 AQGGRFLEIGKFDLANNNMLGMEVF-MRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEA 737 (1392)
Q Consensus 659 a~~Gr~v~iG~~~~~~~~~l~~~~~-~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA 737 (1392)
+++|+++.+|..... ...+.+..+ .+++++.+..+..+. ..+.........+.+++.++.+.+.+.+.|+++++.+|
T Consensus 226 ~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a 303 (320)
T cd05286 226 RPRGTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHYI-ATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQA 303 (320)
T ss_pred ccCcEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhhc-CCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHH
Confidence 999999999865432 222233333 788888877655443 34444555666677788889888888889999999999
Q ss_pred HHHHHcCCccceEEEE
Q psy1119 738 FRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 738 ~~~l~~g~~~GKvVI~ 753 (1392)
|+.+.++...||+|+.
T Consensus 304 ~~~~~~~~~~~~vv~~ 319 (320)
T cd05286 304 HRDLESRKTTGKLLLI 319 (320)
T ss_pred HHHHHcCCCCceEEEe
Confidence 9999999999999875
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=299.51 Aligned_cols=292 Identities=16% Similarity=0.202 Sum_probs=229.9
Q ss_pred CceEEeCCCCcccccccCCC-CCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKD-NINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-------- 505 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~-~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-------- 505 (1392)
.+++.+.|.|. + .++||+|||.++|+|+.|+....+.-. . ..|.++|||++|+|+
T Consensus 11 ~~~~~~~~~P~--------~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~-------~~p~i~G~e~~G~V~~vG~~v~~ 74 (347)
T PRK10309 11 IVRVAESPIPE--------IKHQDDVLVKVASSGLCGSDIPRIFKNGA-H-------YYPITLGHEFSGYVEAVGSGVDD 74 (347)
T ss_pred ceEEEECCCCC--------CCCCCEEEEEEEEEEEchhcHHHHhCCCC-C-------CCCcccccceEEEEEEeCCCCCC
Confidence 47888888875 4 589999999999999999975422100 0 126789999999987
Q ss_pred -eCCCeEEEee---------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHH
Q psy1119 506 -DSGKRVMGLT---------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAM 557 (1392)
Q Consensus 506 -~vGdrV~gl~---------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL 557 (1392)
++||+|+++. ..|+|++|+.+++..++++|+++++++||.++ +++++|+++
T Consensus 75 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~ 153 (347)
T PRK10309 75 LHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAF 153 (347)
T ss_pred CCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHH
Confidence 3688997652 25899999999999999999999999999885 567788886
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCC
Q psy1119 558 FICGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKG 636 (1392)
Q Consensus 558 ~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g 636 (1392)
..+.+++|++|||+| +|++|++++|+|+++|++ |++++++++|++++++ ++++++++.++.+ .+.+++.+.+
T Consensus 154 -~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~----~Ga~~~i~~~~~~-~~~~~~~~~~ 226 (347)
T PRK10309 154 -HLAQGCEGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKS----LGAMQTFNSREMS-APQIQSVLRE 226 (347)
T ss_pred -HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCceEecCcccC-HHHHHHHhcC
Confidence 667899999999995 699999999999999997 6888889999998865 6788999987766 5678888888
Q ss_pred Ccce-EEEecCch-hHHHHHHhcccCCeEEEEEcccccccC-cccc-ccccCCCcEEEEEechhhhhhCHHHHHHHHHHH
Q psy1119 637 RGVD-LVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANN-NMLG-MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKAL 712 (1392)
Q Consensus 637 ~GvD-vVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~-~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~ 712 (1392)
+++| +|||+.|+ ..+..++++++++|+++.+|....... .... ..++.+++++.|........... ...+.+
T Consensus 227 ~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~----~~~~~~ 302 (347)
T PRK10309 227 LRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPG----QEWETA 302 (347)
T ss_pred CCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcch----hHHHHH
Confidence 8998 99999986 478999999999999999996532111 1101 13567889999875432110011 123345
Q ss_pred HHHHHcCCCC--CcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 713 QKAIDAGAVQ--PLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 713 ~~~l~~g~l~--pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
.+++++|.++ ++++++|+++|+++||+.+.+++..||+|+++
T Consensus 303 ~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 303 SRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred HHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 5678889874 57899999999999999999999889999875
|
|
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=300.91 Aligned_cols=295 Identities=18% Similarity=0.254 Sum_probs=236.0
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCC-C--Chhhh-hhhccccccccceeeEEEEee---
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAK-L--APEVI-ESRRLYQHCVIGFEYSGRLRD--- 506 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~-~--~~~~~-~~~~~~~p~~lG~E~sGvV~~--- 506 (1392)
+.+.|.+.|.|. ++++||+|+|.|+|+|+.|++...|. + +.... +......|.++|+|++|+|++
T Consensus 10 ~~l~~~~~~~p~--------~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~ 81 (351)
T cd08233 10 KDIRVEEVPEPP--------VKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVGS 81 (351)
T ss_pred CceEEEeccCCC--------CCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeCC
Confidence 357888888775 68999999999999999999876542 1 11000 000112477999999999873
Q ss_pred ------CCCeEEEe---------------------------e-cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHH
Q psy1119 507 ------SGKRVMGL---------------------------T-SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYAT 552 (1392)
Q Consensus 507 ------vGdrV~gl---------------------------~-~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~T 552 (1392)
+||+|++. . ..|+|++|+.++...++++|+++++++||.+ .+++|
T Consensus 82 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~t 160 (351)
T cd08233 82 GVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-EPLAV 160 (351)
T ss_pred CCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-cHHHH
Confidence 67888752 1 1488999999999999999999999999876 57899
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHH
Q psy1119 553 AVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVM 631 (1392)
Q Consensus 553 A~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~ 631 (1392)
||+++ ..+++++|++|||+| +|++|++++|+|+.+|+ +|+++.++++|.+++++ +++++++++++.++.+.++
T Consensus 161 a~~~l-~~~~~~~g~~vlI~g-~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~l~ 234 (351)
T cd08233 161 AWHAV-RRSGFKPGDTALVLG-AGPIGLLTILALKAAGASKIIVSEPSEARRELAEE----LGATIVLDPTEVDVVAEVR 234 (351)
T ss_pred HHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCCEEECCCccCHHHHHH
Confidence 99999 788999999999996 59999999999999999 79999999999998865 5789999999989999999
Q ss_pred HHcCCCcceEEEecCc-hhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHH
Q psy1119 632 KRTKGRGVDLVLNSLA-EEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQK 710 (1392)
Q Consensus 632 ~~T~g~GvDvVlds~~-~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~ 710 (1392)
+.++++|+|+|||+.+ ...+..++++++++|+++.+|... .........++.+++++.+..... .....
T Consensus 235 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~---------~~~~~ 304 (351)
T cd08233 235 KLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWE-KPISFNPNDLVLKEKTLTGSICYT---------REDFE 304 (351)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCC-CCCccCHHHHHhhCcEEEEEeccC---------cchHH
Confidence 9999889999999997 467899999999999999999764 211112224456888988874321 12345
Q ss_pred HHHHHHHcCCCCC--cceeeeccccH-HHHHHHHHcCCcc-ceEEEE
Q psy1119 711 ALQKAIDAGAVQP--LVRTIFPEDKV-EEAFRYMAAGKHI-GKVIIK 753 (1392)
Q Consensus 711 ~~~~~l~~g~l~p--l~~~vf~l~ev-~eA~~~l~~g~~~-GKvVI~ 753 (1392)
.+.+++++|.+++ +++++|+++|+ ++||+.+.++++. ||+||.
T Consensus 305 ~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 305 EVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred HHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 5667889999864 57889999996 7999999999875 999873
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-29 Score=294.52 Aligned_cols=300 Identities=23% Similarity=0.311 Sum_probs=246.8
Q ss_pred ccCCC--CCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 428 LVRGD--MSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 428 ~~~G~--l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
.+++. .+.+++.+.+.|. +.+++++|+|.++|+|+.|++...|.++.. ...|.++|+|++|+|.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~--------~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~------~~~p~~~g~e~~G~v~ 73 (329)
T cd08250 8 HRLSPNFREATSIVDVPVPL--------PGPGEVLVKNRFVGINASDINFTAGRYDPG------VKPPFDCGFEGVGEVV 73 (329)
T ss_pred ccCCCCcccCceEEecCCCC--------CCCCEEEEEEEEEecCHHHHHHHhCCCCCC------CCCCcccCceeEEEEE
Confidence 34454 6778888887765 688999999999999999999988876422 1236789999999986
Q ss_pred e---------CCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Q psy1119 506 D---------SGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSG 576 (1392)
Q Consensus 506 ~---------vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~G 576 (1392)
. +||+|+++. .|+|++|+.++...++++|++ +.+++++++++.|||+++...+++++|++|+||||+|
T Consensus 74 ~vG~~v~~~~~Gd~V~~~~-~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g 150 (329)
T cd08250 74 AVGEGVTDFKVGDAVATMS-FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAG 150 (329)
T ss_pred EECCCCCCCCCCCEEEEec-CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCcc
Confidence 3 588998875 478999999999999999997 4578889999999999998888999999999999999
Q ss_pred hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHh
Q psy1119 577 GVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVR 656 (1392)
Q Consensus 577 gVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~ 656 (1392)
++|++++|+|+..|++|+++++++++++++++ ++.+++++....++.+.+++..+ +|+|+|||+.++..+..+++
T Consensus 151 ~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~-~~vd~v~~~~g~~~~~~~~~ 225 (329)
T cd08250 151 GTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS----LGCDRPINYKTEDLGEVLKKEYP-KGVDVVYESVGGEMFDTCVD 225 (329)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHH----cCCceEEeCCCccHHHHHHHhcC-CCCeEEEECCcHHHHHHHHH
Confidence 99999999999999999999999999999865 56688888888788887877654 78999999999888999999
Q ss_pred cccCCeEEEEEcccccc---------cCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCc--c
Q psy1119 657 CLAQGGRFLEIGKFDLA---------NNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPL--V 725 (1392)
Q Consensus 657 ~La~~Gr~v~iG~~~~~---------~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl--~ 725 (1392)
|++++|+++.+|..... ....+.+..+.++++|.++.+..+.. .....+..+.+++.+|.+.+. +
T Consensus 226 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~ 301 (329)
T cd08250 226 NLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAK----LIPQHLDRLLQLYQRGKLVCEVDP 301 (329)
T ss_pred HhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHH----HHHHHHHHHHHHHHCCCeeeeECC
Confidence 99999999999865432 11123345578899999987654322 133455566678888988873 4
Q ss_pred eeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 726 RTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 726 ~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
.++|+++++++||+.+.+++..||+|++
T Consensus 302 ~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 302 TRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred ccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 5679999999999999999999998863
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-29 Score=303.37 Aligned_cols=305 Identities=22% Similarity=0.303 Sum_probs=241.6
Q ss_pred eccCCCCC-CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhh-hc---cccccccceeeE
Q psy1119 427 ALVRGDMS-SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIES-RR---LYQHCVIGFEYS 501 (1392)
Q Consensus 427 ~~~~G~l~-~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~-~~---~~~p~~lG~E~s 501 (1392)
..+.|++. .+++.+.|.|. +++++|+|+|.++|+|+.|++...|. +.+.+.. .. ...+.++|||++
T Consensus 20 ~~~~g~~~~~~~~~~~~~p~--------l~~~evlI~v~~~gi~~~d~~~~~g~-~~~~~~~~~~~~~~~~~~~~G~e~~ 90 (393)
T cd08246 20 PERYGDPAQAIQLEDVPVPE--------LGPGEVLVAVMAAGVNYNNVWAALGE-PVSTFAARQRRGRDEPYHIGGSDAS 90 (393)
T ss_pred cccCCCcccceEEeecCCCC--------CCCCEEEEEEEEEeeccchhhhhcCC-CccccccccccCCCCCccccccceE
Confidence 34566664 68888888875 68999999999999999999988775 2110000 00 011358899999
Q ss_pred EEEee---------CCCeEEEee----------------------------cCCcccceEEecccceEEcCCCCCHhhHh
Q psy1119 502 GRLRD---------SGKRVMGLT----------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAA 544 (1392)
Q Consensus 502 GvV~~---------vGdrV~gl~----------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA 544 (1392)
|+|++ +||+|+++. ..|+|++|+.+++..++++|+++++++||
T Consensus 91 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa 170 (393)
T cd08246 91 GIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAA 170 (393)
T ss_pred EEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHh
Confidence 99873 688887763 13899999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCC
Q psy1119 545 TVPCVYATAVYAMFIC--GQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSR 622 (1392)
Q Consensus 545 ~lp~~~~TA~~aL~~~--a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~ 622 (1392)
.++++++|||+++... +++++|++|||+|++|++|++++++|+++|+++++++++++|++++++ ++++++++.+
T Consensus 171 ~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~----~G~~~~i~~~ 246 (393)
T cd08246 171 AYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRA----LGAEGVINRR 246 (393)
T ss_pred hhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH----cCCCEEEccc
Confidence 9999999999998765 789999999999999999999999999999999999999999999976 6778888764
Q ss_pred Cc----------------------cHHHHHHHHcCCC-cceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCcccc
Q psy1119 623 DT----------------------SFEQLVMKRTKGR-GVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLG 679 (1392)
Q Consensus 623 ~~----------------------~~~~~i~~~T~g~-GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~ 679 (1392)
+. .|.+.+++.++++ |+|+|||+.++..+..++++++++|+++.+|...........
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 326 (393)
T cd08246 247 DFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHTYDN 326 (393)
T ss_pred ccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCCCcH
Confidence 32 3678899999988 999999999888889999999999999999865322111111
Q ss_pred ccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcC-CccceEEEE
Q psy1119 680 MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAG-KHIGKVIIK 753 (1392)
Q Consensus 680 ~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g-~~~GKvVI~ 753 (1392)
..++.++.++.+..... . +....+.+++++|.+.+.++++|+++++++||+.+.++ +..||+|+-
T Consensus 327 ~~l~~~~~~i~g~~~~~-----~----~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 327 RYLWMRQKRIQGSHFAN-----D----REAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred HHHhhheeEEEecccCc-----H----HHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence 23345666666653322 1 12344556788898988888999999999999999999 799998763
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-29 Score=295.67 Aligned_cols=284 Identities=21% Similarity=0.278 Sum_probs=233.7
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~-------- 506 (1392)
.+++.+.|.|. +.+++|+|+|.++|+|+.|+....|.++.. ..|.++|||++|+|++
T Consensus 12 ~~~~~~~~~p~--------~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-------~~p~~~g~e~~G~v~~vG~~v~~~ 76 (333)
T cd08296 12 PLELVERDVPL--------PGPGEVLIKVEACGVCHSDAFVKEGAMPGL-------SYPRVPGHEVVGRIDAVGEGVSRW 76 (333)
T ss_pred CceEEeccCCC--------CCCCEEEEEEEEEecchHHHHHHhCCCCCC-------CCCcccCcceeEEEEEECCCCccC
Confidence 47788888765 688999999999999999999998876422 1267899999999873
Q ss_pred -CCCeEEE----------------------------eecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHH
Q psy1119 507 -SGKRVMG----------------------------LTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAM 557 (1392)
Q Consensus 507 -vGdrV~g----------------------------l~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL 557 (1392)
+||+|+. +...|++++|+.+++..++++|+++++++|+.+++++.|||+++
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~ 156 (333)
T cd08296 77 KVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNAL 156 (333)
T ss_pred CCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence 6889975 33358899999999999999999999999999999999999998
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCC
Q psy1119 558 FICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGR 637 (1392)
Q Consensus 558 ~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~ 637 (1392)
... ++++|++|||+| +|++|++++|+|+++|++|+++++++++++++++ ++++++++++..++.+.+++. +
T Consensus 157 ~~~-~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~---~ 227 (333)
T cd08296 157 RNS-GAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARK----LGAHHYIDTSKEDVAEALQEL---G 227 (333)
T ss_pred Hhc-CCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH----cCCcEEecCCCccHHHHHHhc---C
Confidence 654 899999999998 7999999999999999999999999999999965 577899998887888777765 3
Q ss_pred cceEEEecCc-hhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHH
Q psy1119 638 GVDLVLNSLA-EEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAI 716 (1392)
Q Consensus 638 GvDvVlds~~-~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l 716 (1392)
|+|+++|+.+ +..+..++++++++|+++.+|.... ........++.+++++.++.... .. ....+.+++
T Consensus 228 ~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~-----~~----~~~~~~~~~ 297 (333)
T cd08296 228 GAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE-PVAVSPLQLIMGRKSIHGWPSGT-----AL----DSEDTLKFS 297 (333)
T ss_pred CCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC-CCCcCHHHHhhcccEEEEeCcCC-----HH----HHHHHHHHH
Confidence 7999999885 6788899999999999999997541 11111124458899999986322 11 122334556
Q ss_pred HcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 717 DAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 717 ~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
.++.+++++ ++|+++++.+||+.+.+++..||+|++
T Consensus 298 ~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 298 ALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 778888874 689999999999999999999999874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal |
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-29 Score=294.23 Aligned_cols=305 Identities=14% Similarity=0.213 Sum_probs=234.0
Q ss_pred eccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-
Q psy1119 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR- 505 (1392)
Q Consensus 427 ~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~- 505 (1392)
...+|+...+.+.+.|.|. +.++||+|+|.++|+|+.|+....+..... ...|.++|||++|+|+
T Consensus 6 ~~~~~~~~~~~~~~~~~p~--------~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~------~~~~~~~g~e~~G~V~~ 71 (326)
T cd08289 6 VEKDEDDVSVSVKNLTLDD--------LPEGDVLIRVAYSSVNYKDGLASIPGGKIV------KRYPFIPGIDLAGTVVE 71 (326)
T ss_pred EeccCCcceeEEEEccCCC--------CCCCeEEEEEEEEecChHHhhhhcCCcccc------CCCCcCcccceeEEEEE
Confidence 3456777778888888775 689999999999999999987765321110 1136789999999986
Q ss_pred ------eCCCeEEEee------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhc--C-CCCCCEEE
Q psy1119 506 ------DSGKRVMGLT------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICG--Q-MQKGESIL 570 (1392)
Q Consensus 506 ------~vGdrV~gl~------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a--~-l~~GetVL 570 (1392)
++||+|+++. ..|+|++|+.+++..++++|+++++++++.+++++.||++++.... . ...|++||
T Consensus 72 ~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vl 151 (326)
T cd08289 72 SNDPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVL 151 (326)
T ss_pred cCCCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEE
Confidence 3699998864 3589999999999999999999999999999999999999886443 2 34578999
Q ss_pred EEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhH
Q psy1119 571 IHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEK 650 (1392)
Q Consensus 571 I~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~ 650 (1392)
|||++|++|++++|+|+++|++|+++++++++++++++ ++.+++++.++. ..+.+++.+ ++++|+|||+.++..
T Consensus 152 I~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~-~~~~~~~~~-~~~~d~vld~~g~~~ 225 (326)
T cd08289 152 VTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKK----LGAKEVIPREEL-QEESIKPLE-KQRWAGAVDPVGGKT 225 (326)
T ss_pred EEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH----cCCCEEEcchhH-HHHHHHhhc-cCCcCEEEECCcHHH
Confidence 99999999999999999999999999999999999965 567888887665 355666664 578999999999888
Q ss_pred HHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeec
Q psy1119 651 LQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFP 730 (1392)
Q Consensus 651 l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~ 730 (1392)
+..++++++++|+++.+|.......+.....++.+++++.++....... .........+...+..+.+.+.+.++|+
T Consensus 226 ~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (326)
T cd08289 226 LAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPM---ELRRRIWRRLATDLKPTQLLNEIKQEIT 302 (326)
T ss_pred HHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCc---hHHHHHHHHHHhhcCccccccccceEee
Confidence 9999999999999999996532211111123447889999875322100 1112233333333332333344688999
Q ss_pred cccHHHHHHHHHcCCccceEEEEe
Q psy1119 731 EDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 731 l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
++++.+||+.+.+++..||+|+++
T Consensus 303 l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 303 LDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred HHHHHHHHHHHhcCcccceEEEeC
Confidence 999999999999999999999863
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-29 Score=297.84 Aligned_cols=300 Identities=23% Similarity=0.362 Sum_probs=236.9
Q ss_pred cCCCCCCceEEeC-CCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhh-------------hhhhcccccc
Q psy1119 429 VRGDMSSLTWEQG-PVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEV-------------IESRRLYQHC 494 (1392)
Q Consensus 429 ~~G~l~~l~~~~~-~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~-------------~~~~~~~~p~ 494 (1392)
.+|.+..+.|.+. +.|. +.+++|+|+|.++|+|++|+++..|.++... ..+.....|.
T Consensus 8 ~~~~~~~~~~~~~~~~~~--------~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 79 (350)
T cd08274 8 GHGGLDKLVYRDDVPVPT--------PAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPR 79 (350)
T ss_pred ccCCccceeecccCCCCC--------CCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCc
Confidence 4555667777653 5443 6889999999999999999999988654210 0000123468
Q ss_pred ccceeeEEEEee---------CCCeEEEe-----------------e--cCCcccceEEecccceEEcCCCCCHhhHhhh
Q psy1119 495 VIGFEYSGRLRD---------SGKRVMGL-----------------T--SGRSLANCCETDVEMAWEIPDQWTLEDAATV 546 (1392)
Q Consensus 495 ~lG~E~sGvV~~---------vGdrV~gl-----------------~--~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~l 546 (1392)
++|||++|+|++ +||+|++. . ..|++++|+.++...++++|++++++++|++
T Consensus 80 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l 159 (350)
T cd08274 80 IQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATF 159 (350)
T ss_pred ccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhc
Confidence 899999999873 58888773 1 2489999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccH
Q psy1119 547 PCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSF 626 (1392)
Q Consensus 547 p~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~ 626 (1392)
++++.|||+++ ..+++++|++|||+|++|++|++++|+|+++|++|+++++++ +++.+++ ++.+++.+..+..+
T Consensus 160 ~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~----~g~~~~~~~~~~~~ 233 (350)
T cd08274 160 PCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRA----LGADTVILRDAPLL 233 (350)
T ss_pred ccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHh----cCCeEEEeCCCccH
Confidence 99999999998 778999999999999999999999999999999999988765 7888854 45666666555444
Q ss_pred HHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhhhhhCHHHH
Q psy1119 627 EQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFFAEQEWK 705 (1392)
Q Consensus 627 ~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~~~~~~~ 705 (1392)
.+ +..+.++|+|+|||+.+++.+..++++++++|+++.+|..... ...+.+ .++.+++++.+.....
T Consensus 234 ~~--~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------- 301 (350)
T cd08274 234 AD--AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGP-VVELDLRTLYLKDLTLFGSTLGT--------- 301 (350)
T ss_pred HH--HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCc-cccCCHHHhhhcceEEEEeecCC---------
Confidence 44 6678888999999999988899999999999999999854211 112222 3367888888876421
Q ss_pred HHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 706 MSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 706 ~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
...+..+.+++.+|.+++++.++|+++++.+||+.+.+++..||+|+.+
T Consensus 302 ~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 302 REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 2234455677888999888889999999999999999999999998753
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-29 Score=303.56 Aligned_cols=302 Identities=20% Similarity=0.158 Sum_probs=228.4
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHh-cCCCChhhhhhhccccccccceeeEEEEee-------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLT-TAKLAPEVIESRRLYQHCVIGFEYSGRLRD------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~-~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~------- 506 (1392)
.+++.+.|.|. ++++||+|||.++|||++|++.+ .|..... .+......|.++|||++|+|++
T Consensus 13 ~l~~~e~p~P~--------~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~-~~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 83 (410)
T cd08238 13 DLRLEKFELPE--------IADDEILVRVISDSLCFSTWKLALQGSDHKK-VPNDLAKEPVILGHEFAGTILKVGKKWQG 83 (410)
T ss_pred ceEEEecCCCC--------CCCCeEEEEEEEeccCCCCHHHHhcCCcccc-CcccccCCCceeccccEEEEEEeCCCccC
Confidence 57888888875 68999999999999999999976 5643110 0000112477899999999873
Q ss_pred ---CCCeEEEee----------------cCCcccceEEeccc----ceEEcCCCCCHhhHhhh-hHH-HHHHHHH-----
Q psy1119 507 ---SGKRVMGLT----------------SGRSLANCCETDVE----MAWEIPDQWTLEDAATV-PCV-YATAVYA----- 556 (1392)
Q Consensus 507 ---vGdrV~gl~----------------~~g~~a~~v~~~~~----~~~~iPd~ls~e~AA~l-p~~-~~TA~~a----- 556 (1392)
+||||+... ..|+|++|+.+++. .++++|+++++++||.+ |.+ ..+++.+
T Consensus 84 ~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~ 163 (410)
T cd08238 84 KYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQ 163 (410)
T ss_pred CCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhhhccccc
Confidence 577786531 24899999999997 58999999999999866 321 1223333
Q ss_pred ---HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC---EEEEEecChhhHHHHHHHCCCC----CcC-ceeeCCC-c
Q psy1119 557 ---MFICGQMQKGESILIHAGSGGVGQAAINLARYMDA---EIFTTVGTPEKREFIRKTFPFI----KEE-NIGNSRD-T 624 (1392)
Q Consensus 557 ---L~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga---~V~~tv~s~ek~~~l~~~~p~l----~~~-~i~~s~~-~ 624 (1392)
+..++++++|++|+|+||+|++|++++|+|+++|+ +|++++.+++|++++++.++.. |++ ++++.++ .
T Consensus 164 ~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~ 243 (410)
T cd08238 164 PGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATID 243 (410)
T ss_pred ccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccc
Confidence 23567899999999999999999999999999864 7999999999999998744321 445 5677765 5
Q ss_pred cHHHHHHHHcCCCcceEEEecCc-hhHHHHHHhcccCCeEEEEEccccccc-Ccccc-ccccCCCcEEEEEechhhhhhC
Q psy1119 625 SFEQLVMKRTKGRGVDLVLNSLA-EEKLQASVRCLAQGGRFLEIGKFDLAN-NNMLG-MEVFMRETSFHGVMLDNFFFAE 701 (1392)
Q Consensus 625 ~~~~~i~~~T~g~GvDvVlds~~-~~~l~~s~~~La~~Gr~v~iG~~~~~~-~~~l~-~~~~~k~~s~~g~~~~~~~~~~ 701 (1392)
++.+.+++.|+++|+|+|+|+.+ +..+..++++++++|+++.++...... ...++ ..++.+++++.|.....
T Consensus 244 ~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~----- 318 (410)
T cd08238 244 DLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN----- 318 (410)
T ss_pred cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCCC-----
Confidence 78888999999999999999886 577899999999999988775431111 11222 24567889999865322
Q ss_pred HHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEEec
Q psy1119 702 QEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 702 ~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
. ...+.+.+++.+|+++| +++++|+++++.+||+.+. ++..||+||.++
T Consensus 319 ~----~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~ 369 (410)
T cd08238 319 T----DDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ 369 (410)
T ss_pred H----HHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence 1 12334557888999988 6889999999999999999 788899999874
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-28 Score=287.70 Aligned_cols=285 Identities=22% Similarity=0.312 Sum_probs=232.9
Q ss_pred CCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe----
Q psy1119 430 RGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR---- 505 (1392)
Q Consensus 430 ~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~---- 505 (1392)
.+ +..+.+.+.|.|. +.++|++|+|.|+|+|+.|++...+.. .+.++|+|++|+|.
T Consensus 9 ~~-~~~~~~~~~~~p~--------~~~~ev~v~v~~~~i~~~d~~~~~~~~-----------~~~~~g~e~~G~v~~~G~ 68 (305)
T cd08270 9 DA-PLRLRLGEVPDPQ--------PAPHEALVRVAAISLNRGELKFAAERP-----------DGAVPGWDAAGVVERAAA 68 (305)
T ss_pred CC-CceeEEEecCCCC--------CCCCEEEEEEEEEecCHHHHHhhccCC-----------CCCcccceeEEEEEEeCC
Confidence 44 6678888888765 688999999999999999998765321 14579999999986
Q ss_pred -----eCCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHH
Q psy1119 506 -----DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQ 580 (1392)
Q Consensus 506 -----~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~ 580 (1392)
++||+|+++...|+|++|+.++...++++|+++++++|+++++++.|||+++...+.. +|++|+|||++|++|+
T Consensus 69 ~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~ 147 (305)
T cd08270 69 DGSGPAVGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGR 147 (305)
T ss_pred CCCCCCCCCEEEEecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHH
Confidence 3689999987668999999999999999999999999999999999999999777765 5999999999999999
Q ss_pred HHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccC
Q psy1119 581 AAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQ 660 (1392)
Q Consensus 581 aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~ 660 (1392)
+++++|+..|++|++++++++|.+++++ ++.+.+++... +.++ +++|+++|++++..+..+++|+++
T Consensus 148 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~--------~~~~-~~~d~vl~~~g~~~~~~~~~~l~~ 214 (305)
T cd08270 148 FAVQLAALAGAHVVAVVGSPARAEGLRE----LGAAEVVVGGS--------ELSG-APVDLVVDSVGGPQLARALELLAP 214 (305)
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCcEEEeccc--------cccC-CCceEEEECCCcHHHHHHHHHhcC
Confidence 9999999999999999999999999976 34555544322 1233 579999999998888999999999
Q ss_pred CeEEEEEcccccccCccccccccC---CCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHH
Q psy1119 661 GGRFLEIGKFDLANNNMLGMEVFM---RETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEA 737 (1392)
Q Consensus 661 ~Gr~v~iG~~~~~~~~~l~~~~~~---k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA 737 (1392)
+|+++.+|... .......+..+. ++.++.++.+.. +.........+.+++.+|++++.+.++|+++++.+|
T Consensus 215 ~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a 288 (305)
T cd08270 215 GGTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLYD-----GEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEA 288 (305)
T ss_pred CCEEEEEeccC-CCcccccHHHHhcccccceEEEEEccC-----HHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHH
Confidence 99999999754 222223333333 488888876543 222234556677888999999888889999999999
Q ss_pred HHHHHcCCccceEEEEe
Q psy1119 738 FRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 738 ~~~l~~g~~~GKvVI~~ 754 (1392)
|+.+.+++..||+|+.+
T Consensus 289 ~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 289 AEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHHHcCCCCceEEEeC
Confidence 99999999999999864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08249 enoyl_reductase_like enoyl_reductase_like | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-29 Score=295.99 Aligned_cols=298 Identities=20% Similarity=0.325 Sum_probs=240.4
Q ss_pred eccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-
Q psy1119 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR- 505 (1392)
Q Consensus 427 ~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~- 505 (1392)
+..+| +..++..+.+.|. ++++||+|+|.++|+|++|+....+..+. ..+.++|+|++|+|.
T Consensus 6 ~~~~~-~~~~~~~~~~~p~--------~~~~ev~i~v~~~~i~~~d~~~~~~~~~~--------~~~~~~g~e~~G~v~~ 68 (339)
T cd08249 6 LTGPG-GGLLVVVDVPVPK--------PGPDEVLVKVKAVALNPVDWKHQDYGFIP--------SYPAILGCDFAGTVVE 68 (339)
T ss_pred eccCC-CCcccccCCCCCC--------CCCCEEEEEEEEEEcCchheeeeeccccc--------CCCceeeeeeeEEEEE
Confidence 34455 6667778877765 68999999999999999999877554311 125689999999987
Q ss_pred --------eCCCeEEEeec--------CCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCC------
Q psy1119 506 --------DSGKRVMGLTS--------GRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQM------ 563 (1392)
Q Consensus 506 --------~vGdrV~gl~~--------~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l------ 563 (1392)
++||+|+++.. .|++++|+.++...++++|+++++++++++++++.|||+++...+++
T Consensus 69 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~ 148 (339)
T cd08249 69 VGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPK 148 (339)
T ss_pred eCCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCC
Confidence 36889998764 48999999999999999999999999999999999999999777655
Q ss_pred ----CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcc
Q psy1119 564 ----QKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGV 639 (1392)
Q Consensus 564 ----~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~Gv 639 (1392)
++|++|||||++|++|++++|+|+++|++|++++ +++|++++++ ++.++++++++.++.+.+++.++ +++
T Consensus 149 ~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~~----~g~~~v~~~~~~~~~~~l~~~~~-~~~ 222 (339)
T cd08249 149 PSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVKS----LGADAVFDYHDPDVVEDIRAATG-GKL 222 (339)
T ss_pred CCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHHh----cCCCEEEECCCchHHHHHHHhcC-CCe
Confidence 7999999999999999999999999999999888 5688888854 56789999998899999988775 689
Q ss_pred eEEEecCch-hHHHHHHhcccC--CeEEEEEcccccccCccccccccCCCcEEEEEechhhhh---hCHHHHHHHHHHHH
Q psy1119 640 DLVLNSLAE-EKLQASVRCLAQ--GGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFF---AEQEWKMSLQKALQ 713 (1392)
Q Consensus 640 DvVlds~~~-~~l~~s~~~La~--~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~---~~~~~~~~~~~~~~ 713 (1392)
|+|||++++ ..+..+++|+++ +|+++.+|...... .+..+.++..+....+.. ..+.......+.+.
T Consensus 223 d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (339)
T cd08249 223 RYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET-------EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLP 295 (339)
T ss_pred eEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc-------cCCCCceEEEEEeeeecccccccccchHHHHHHHH
Confidence 999999987 889999999999 99999998654321 122344444443332221 22223344556666
Q ss_pred HHHHcCCCCCcceeeec--cccHHHHHHHHHcCC-ccceEEEEe
Q psy1119 714 KAIDAGAVQPLVRTIFP--EDKVEEAFRYMAAGK-HIGKVIIKI 754 (1392)
Q Consensus 714 ~~l~~g~l~pl~~~vf~--l~ev~eA~~~l~~g~-~~GKvVI~~ 754 (1392)
+++.++.+.+.+..+++ ++++.+||+.+..++ ..||+|+++
T Consensus 296 ~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 296 ELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 78889999988777888 999999999999999 999999864
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de |
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-30 Score=274.59 Aligned_cols=204 Identities=17% Similarity=0.221 Sum_probs=177.7
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCceEEEecC--------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD--------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~--------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
.+..|||||++||++..|++|.+.|+.++.++.+| .+++.++|++||+.+.++|.. +.++.||.|+||||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~--~~~d~P~alfGHSm 83 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLP--PLLDAPFALFGHSM 83 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhcc--ccCCCCeeecccch
Confidence 34679999999999999999999999998888886 688899999999999999983 23688999999999
Q ss_pred hHHHHHHHHHHHHHcCCcc-EEEEEeCCCCC-Cc-cccCCCCChHHHHHHHHhc--CCccccCCHHHHHHHHHHHHHHHH
Q psy1119 1228 GGMVALELAIKLEQLGTKC-HLYLVDSAPDY-VL-TSLRKLPDWNAKLNYFLDL--MPEDATHSRTYQRNLAHAAYKRIT 1302 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~-~~-~~l~~~~~~~~~l~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~ 1302 (1392)
||+||||+|++|+++|..+ .|+++.+.+|. .. ..+.. .+..+.++.+.+. .+.+...++|++..+++++|+|++
T Consensus 84 Ga~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~-~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~ 162 (244)
T COG3208 84 GAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHH-LDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFR 162 (244)
T ss_pred hHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccC-CCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHH
Confidence 9999999999999999887 88899887763 32 23333 3447778877554 677788899999999999999999
Q ss_pred hhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEccCccccccChH
Q psy1119 1303 SILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIK 1362 (1392)
Q Consensus 1303 ~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G~H~~ml~~~~ 1362 (1392)
+.+.|+..+..++.+||+++.+.+|. +..+....|++++++.++.+.++||||++.++..
T Consensus 163 ~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdGgHFfl~~~~~ 223 (244)
T COG3208 163 ALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDGGHFFLNQQRE 223 (244)
T ss_pred HhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecCcceehhhhHH
Confidence 99999988878999999999999998 6667777899999999999999999999998864
|
|
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-29 Score=299.69 Aligned_cols=295 Identities=18% Similarity=0.187 Sum_probs=218.4
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~-------- 506 (1392)
.+++.+.|.|...... -.+.++||+|||.++|||++|++++.|..+.. .|.++|||++|+|++
T Consensus 13 ~~~~~e~~~P~~~~~~-~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~~--------~p~i~GhE~~G~V~~vG~~V~~~ 83 (393)
T TIGR02819 13 KVEVQDIDYPKLELPD-GRKCEHGVILKVVTTNICGSDQHMVRGRTTAP--------TGLVLGHEITGEVIEKGRDVEFI 83 (393)
T ss_pred ceeEEeccCCcccCCC-ccCCCCeEEEEEEEeeecHHHHHHHCCCCCCC--------CCccccceeEEEEEEEcCccccc
Confidence 4777888887621000 00026899999999999999999998865321 377999999999974
Q ss_pred -CCCeEEEee-------------------------------------cCCcccceEEeccc--ceEEcCCCCCH----hh
Q psy1119 507 -SGKRVMGLT-------------------------------------SGRSLANCCETDVE--MAWEIPDQWTL----ED 542 (1392)
Q Consensus 507 -vGdrV~gl~-------------------------------------~~g~~a~~v~~~~~--~~~~iPd~ls~----e~ 542 (1392)
+||||.... ..|+|+||+.+|+. .++++|++++. ++
T Consensus 84 ~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~ 163 (393)
T TIGR02819 84 KIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRD 163 (393)
T ss_pred cCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccccccccc
Confidence 688885410 14899999999964 69999998754 45
Q ss_pred HhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHCCCCCcCceeeC
Q psy1119 543 AATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTT-VGTPEKREFIRKTFPFIKEENIGNS 621 (1392)
Q Consensus 543 AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~t-v~s~ek~~~l~~~~p~l~~~~i~~s 621 (1392)
++++.++++|||+++. .+++++|++|||. |+|++|++++|+|+++|++++++ ..+++|++++++ ++++.+.+.
T Consensus 164 ~a~l~~~~~ta~~a~~-~~~~~~g~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~----~Ga~~v~~~ 237 (393)
T TIGR02819 164 LTMLSDIFPTGYHGAV-TAGVGPGSTVYIA-GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARS----FGCETVDLS 237 (393)
T ss_pred eeeeccHHHHHHHHHH-hcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHH----cCCeEEecC
Confidence 6778889999999984 5889999999995 67999999999999999986554 456778888876 566655544
Q ss_pred CCccHHHHHHHHcCCCcceEEEecCchh---------------HHHHHHhcccCCeEEEEEcccccccCccccc------
Q psy1119 622 RDTSFEQLVMKRTKGRGVDLVLNSLAEE---------------KLQASVRCLAQGGRFLEIGKFDLANNNMLGM------ 680 (1392)
Q Consensus 622 ~~~~~~~~i~~~T~g~GvDvVlds~~~~---------------~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~------ 680 (1392)
.+.++.+.+++.++++|+|+|||+++.+ .++.++++++++|+++.+|...........+
T Consensus 238 ~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~~ 317 (393)
T TIGR02819 238 KDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTGS 317 (393)
T ss_pred CcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccccccc
Confidence 5567888899999888999999999864 7899999999999999999763211111111
Q ss_pred ------cccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCC--cce-eeeccccHHHHHHHHHcCCccceEE
Q psy1119 681 ------EVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVR-TIFPEDKVEEAFRYMAAGKHIGKVI 751 (1392)
Q Consensus 681 ------~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~-~vf~l~ev~eA~~~l~~g~~~GKvV 751 (1392)
..+.+++++.+... .. ......+.+++.+|++.+ +++ ++|+++|+++||+.+.+++. +|++
T Consensus 318 ~~i~~~~~~~~~~~i~g~~~------~~---~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~Kvv 387 (393)
T TIGR02819 318 LSIRFGLGWAKSHSFHTGQT------PV---MKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-KKFV 387 (393)
T ss_pred cccchHHhhccCceEEeccC------Ch---hhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-eEEE
Confidence 12234444444210 11 111234557788998876 445 78999999999999988754 8999
Q ss_pred EEe
Q psy1119 752 IKI 754 (1392)
Q Consensus 752 I~~ 754 (1392)
|.+
T Consensus 388 i~~ 390 (393)
T TIGR02819 388 IDP 390 (393)
T ss_pred EeC
Confidence 876
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >cd05284 arabinose_DH_like D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-28 Score=291.88 Aligned_cols=289 Identities=19% Similarity=0.261 Sum_probs=237.0
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR--------- 505 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~--------- 505 (1392)
.+.+.+.+.|. +.+++++|+|.++|+|+.|+....|.++.. .....|.++|+|++|+|.
T Consensus 12 ~~~~~~~~~~~--------~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~----~~~~~~~~~G~e~~G~V~~vG~~v~~~ 79 (340)
T cd05284 12 PLRLEDVPVPE--------PGPGQVLVRVGGAGVCHSDLHVIDGVWGGI----LPYKLPFTLGHENAGWVEEVGSGVDGL 79 (340)
T ss_pred CceEEeCCCCC--------CCCCeEEEEEEEEeecchhHHHHcCCCccc----ccCCCCeecccceeEEEEEeCCCCCcC
Confidence 46777777764 688999999999999999999998876531 011236789999999986
Q ss_pred eCCCeEEEee---------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHH
Q psy1119 506 DSGKRVMGLT---------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMF 558 (1392)
Q Consensus 506 ~vGdrV~gl~---------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~ 558 (1392)
++||+|+++. ..|+|++|+.+++..++++|+++++++||+++++++|||+++.
T Consensus 80 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~ 159 (340)
T cd05284 80 KEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVK 159 (340)
T ss_pred cCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence 3688998753 2579999999999999999999999999999999999999997
Q ss_pred Hh-cCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCC
Q psy1119 559 IC-GQMQKGESILIHAGSGGVGQAAINLARYMD-AEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKG 636 (1392)
Q Consensus 559 ~~-a~l~~GetVLI~ga~GgVG~aaIqlA~~~G-a~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g 636 (1392)
.. .++.+|++||||| +|++|++++|+|+.+| ++|+++++++++.+++++ ++.++++++++. +.+.+++.+++
T Consensus 160 ~~~~~~~~~~~vlI~g-~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~-~~~~i~~~~~~ 233 (340)
T cd05284 160 KALPYLDPGSTVVVIG-VGGLGHIAVQILRALTPATVIAVDRSEEALKLAER----LGADHVLNASDD-VVEEVRELTGG 233 (340)
T ss_pred HhcccCCCCCEEEEEc-CcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH----hCCcEEEcCCcc-HHHHHHHHhCC
Confidence 76 5788999999998 5779999999999999 899999999999998865 567899998887 88889998888
Q ss_pred CcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHH
Q psy1119 637 RGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKA 715 (1392)
Q Consensus 637 ~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~ 715 (1392)
+++|+|+|+.++ .....++++|+++|+++.+|..+.. .. .....+.+++++.+..... ......+.++
T Consensus 234 ~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~-~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 302 (340)
T cd05284 234 RGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHG-RL-PTSDLVPTEISVIGSLWGT---------RAELVEVVAL 302 (340)
T ss_pred CCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCCC-cc-CHHHhhhcceEEEEEeccc---------HHHHHHHHHH
Confidence 899999999985 6789999999999999999865421 11 1112356888888865321 1223445567
Q ss_pred HHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 716 IDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 716 l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
+++|.+++ +.++|+++++++||+.+.++++.||+|+.
T Consensus 303 l~~g~l~~-~~~~~~~~~~~~a~~~~~~~~~~gkvv~~ 339 (340)
T cd05284 303 AESGKVKV-EITKFPLEDANEALDRLREGRVTGRAVLV 339 (340)
T ss_pred HHhCCCCc-ceEEEeHHHHHHHHHHHHcCCccceEEec
Confidence 88888886 55789999999999999999999999875
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d |
| >cd08251 polyketide_synthase polyketide synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-28 Score=284.25 Aligned_cols=288 Identities=31% Similarity=0.512 Sum_probs=245.8
Q ss_pred CCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---------eCCCeEEEeec--CCcccc
Q psy1119 454 DNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR---------DSGKRVMGLTS--GRSLAN 522 (1392)
Q Consensus 454 ~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~---------~vGdrV~gl~~--~g~~a~ 522 (1392)
+.+++++|++.++|+|+.|++...|.++.. ...|+++|+|++|+|. ++||+|+++.. .|++++
T Consensus 5 ~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~------~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~ 78 (303)
T cd08251 5 PGPGEVRIQVRAFSLNFGDLLCVRGLYPTM------PPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHAT 78 (303)
T ss_pred CCCCEEEEEEEEeecChHHHHHHCCCCCCC------CCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceee
Confidence 688999999999999999999998876421 1236789999999987 36788888642 378999
Q ss_pred eEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh
Q psy1119 523 CCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEK 602 (1392)
Q Consensus 523 ~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek 602 (1392)
|+.+++..++++|+++++++||+++++++|||+++ ..+++++|++|+||+|+|++|++++|+|+++|++|+++++++++
T Consensus 79 ~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~ 157 (303)
T cd08251 79 LVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDK 157 (303)
T ss_pred EEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHH
Confidence 99999999999999999999999999999999998 57899999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccc
Q psy1119 603 REFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEV 682 (1392)
Q Consensus 603 ~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~ 682 (1392)
++++++ ++.+++++....++...+++.++++++|+++|++++.....+++|++++|+++.+|..+......+....
T Consensus 158 ~~~~~~----~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~ 233 (303)
T cd08251 158 LEYLKQ----LGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSV 233 (303)
T ss_pred HHHHHH----cCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChhH
Confidence 999964 5678899988888989999999999999999999888889999999999999999865433333344445
Q ss_pred cCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEE
Q psy1119 683 FMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 683 ~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI 752 (1392)
+.+++++..+.+..+....+....+....+.+++.+|.+++++.+.|+++++.++|+.+.+++..||+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 234 LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 6677888887766554445555556667777888999999888899999999999999999998999874
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a |
| >cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-28 Score=295.67 Aligned_cols=290 Identities=22% Similarity=0.310 Sum_probs=240.8
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~-------- 506 (1392)
.+.+.+.|.|. +.+++|+|+|.++|+|+.|+.+..|.++.. .|.++|+|++|+|++
T Consensus 12 ~~~~~~~~~~~--------~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~--------~p~~~g~e~~G~v~~vG~~~~~~ 75 (367)
T cd08263 12 PLTIEEIPVPR--------PKEGEILIRVAACGVCHSDLHVLKGELPFP--------PPFVLGHEISGEVVEVGPNVENP 75 (367)
T ss_pred CcEEEEeeCCC--------CCCCeEEEEEEEeeeCcchHHHhcCCCCCC--------CCcccccccceEEEEeCCCCCCC
Confidence 46777777664 688999999999999999999998876532 256899999999873
Q ss_pred ----CCCeEEEe-------------------------------------------------ecCCcccceEEecccceEE
Q psy1119 507 ----SGKRVMGL-------------------------------------------------TSGRSLANCCETDVEMAWE 533 (1392)
Q Consensus 507 ----vGdrV~gl-------------------------------------------------~~~g~~a~~v~~~~~~~~~ 533 (1392)
+||+|++. ...|++++|+.++...+++
T Consensus 76 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 155 (367)
T cd08263 76 YGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAP 155 (367)
T ss_pred CcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEE
Confidence 57888872 1358899999999999999
Q ss_pred cCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCC
Q psy1119 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPF 612 (1392)
Q Consensus 534 iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~ 612 (1392)
+|+++++++||+++++++|||+++...+.+++|++|||+ |+|++|++++++|+++|++ |++++.++++.+++++
T Consensus 156 ~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~-g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~---- 230 (367)
T cd08263 156 LPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVI-GVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKE---- 230 (367)
T ss_pred CCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEE-CCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH----
Confidence 999999999999999999999999888889999999999 5799999999999999998 8889899999998865
Q ss_pred CCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCcccccccc-CCCcEEE
Q psy1119 613 IKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVF-MRETSFH 690 (1392)
Q Consensus 613 l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~-~k~~s~~ 690 (1392)
++.+++++.++.++.+.+++.++++++|+|||++++. ....++++++++|+++.+|..+......+.+..+ .+++++.
T Consensus 231 ~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 310 (367)
T cd08263 231 LGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKII 310 (367)
T ss_pred hCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEE
Confidence 5678999998888999999988888999999999887 8899999999999999998654322222333333 5788877
Q ss_pred EEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCc--ceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 691 GVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPL--VRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 691 g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl--~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
+.... .+ ...++.+.+++.+|.+++. +.++|+++++.+||+.++++++.||+|++
T Consensus 311 ~~~~~-----~~---~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 311 GSYGA-----RP---RQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred ecCCC-----Cc---HHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 74211 11 2234556678889998874 57889999999999999999999999874
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu |
| >cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-29 Score=296.05 Aligned_cols=283 Identities=14% Similarity=0.122 Sum_probs=210.1
Q ss_pred CCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-------
Q psy1119 433 MSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR------- 505 (1392)
Q Consensus 433 l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~------- 505 (1392)
+..+++.+.|.| ++++||+|||+|+|||++|++.+.|.++.... ....|.++|||++|+|+
T Consensus 11 ~~~~~~~~~~~P---------~~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~---~~~~P~i~GhE~~G~V~~~g~~~~ 78 (341)
T cd08237 11 PKFFEVTYEEEN---------LREDWVIVRPTYLSICHADQRYYQGNRSPEAL---KKKLPMALIHEGIGVVVSDPTGTY 78 (341)
T ss_pred cceEEEeecCCC---------CCCCeEEEEEEEEEEcCccHHHHcCCCCcccc---cCCCCeeccceeEEEEEeeCCCcc
Confidence 456788887776 37799999999999999999999997532100 01247899999999987
Q ss_pred eCCCeEEEe------------------------ecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHh-
Q psy1119 506 DSGKRVMGL------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFIC- 560 (1392)
Q Consensus 506 ~vGdrV~gl------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~- 560 (1392)
++||||+.. ..+|+|+||+.+|++.++++|+++|+++||.++ +++|+|+++...
T Consensus 79 ~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~-~~~~a~~a~~~~~ 157 (341)
T cd08237 79 KVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTE-LVSVGVHAISRFE 157 (341)
T ss_pred CCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhhc-hHHHHHHHHHHHh
Confidence 589999753 124889999999999999999999999888654 899999998643
Q ss_pred -cCCCCCCEEEEEcCCchHHHHHHHHHHH-cC-CEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCC
Q psy1119 561 -GQMQKGESILIHAGSGGVGQAAINLARY-MD-AEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGR 637 (1392)
Q Consensus 561 -a~l~~GetVLI~ga~GgVG~aaIqlA~~-~G-a~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~ 637 (1392)
+.+++|++|||+| +|+||++++|+|+. .| ++|+++..+++|++++++ .+.++.++ + .+...
T Consensus 158 ~~~~~~g~~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~----~~~~~~~~----~-------~~~~~ 221 (341)
T cd08237 158 QIAHKDRNVIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSF----ADETYLID----D-------IPEDL 221 (341)
T ss_pred hcCCCCCCEEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhh----cCceeehh----h-------hhhcc
Confidence 4578999999997 59999999999986 55 579999889999998865 33332221 1 12234
Q ss_pred cceEEEecCch----hHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHH
Q psy1119 638 GVDLVLNSLAE----EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQ 713 (1392)
Q Consensus 638 GvDvVlds~~~----~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~ 713 (1392)
|+|+|||++++ ..+..++++++++|+++.+|..... .......++.+++++.|+.... ... ...+.
T Consensus 222 g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~k~~~i~g~~~~~-----~~~----~~~~~ 291 (341)
T cd08237 222 AVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYP-VPINTRMVLEKGLTLVGSSRST-----RED----FERAV 291 (341)
T ss_pred CCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCC-cccCHHHHhhCceEEEEecccC-----HHH----HHHHH
Confidence 79999999984 3688999999999999999964221 1111224567899999874321 111 23344
Q ss_pred HHHHcC-----CCCCcceeeeccc---cHHHHHHHHHcCCccceEEEEec
Q psy1119 714 KAIDAG-----AVQPLVRTIFPED---KVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 714 ~~l~~g-----~l~pl~~~vf~l~---ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
+++.+| .++++++++|+++ ++.+||+.+.++ ..||+||.+.
T Consensus 292 ~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 292 ELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred HHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 667777 5777889999986 455555555444 6899999763
|
NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase ( |
| >KOG0022|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=273.49 Aligned_cols=280 Identities=18% Similarity=0.288 Sum_probs=225.7
Q ss_pred CCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee---------CCCeEEEeec--------
Q psy1119 454 DNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD---------SGKRVMGLTS-------- 516 (1392)
Q Consensus 454 ~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~---------vGdrV~gl~~-------- 516 (1392)
|...||+||+.|+|||.+|.+.+.|..+... .|++||||.+|+|+. .||+|+.+-.
T Consensus 30 Pka~EVRIKI~~t~vCHTD~~~~~g~~~~~~-------fP~IlGHEaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~ 102 (375)
T KOG0022|consen 30 PKAHEVRIKILATGVCHTDAYVWSGKDPEGL-------FPVILGHEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKF 102 (375)
T ss_pred CCCceEEEEEEEEeeccccceeecCCCcccc-------CceEecccceeEEEEecCCccccCCCCEEeeccccCCCCccc
Confidence 6889999999999999999999999875543 389999999999984 4566632210
Q ss_pred -----------------------------------------CCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHH
Q psy1119 517 -----------------------------------------GRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVY 555 (1392)
Q Consensus 517 -----------------------------------------~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~ 555 (1392)
-.+|+||.+++...+.+|++..+++.++.+.|..+|+|.
T Consensus 103 C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~G 182 (375)
T KOG0022|consen 103 CKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYG 182 (375)
T ss_pred ccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCChhheeEeeccccccch
Confidence 038899999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCc--cHHHHHHH
Q psy1119 556 AMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDT--SFEQLVMK 632 (1392)
Q Consensus 556 aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~--~~~~~i~~ 632 (1392)
|..+.+++++|++|.|. |.|+||++++|-||+.|| ++|+++-+++|.+..++ +|+.+++|+.|. ...+.|++
T Consensus 183 Aa~~~Akv~~GstvAVf-GLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~----fGaTe~iNp~d~~~~i~evi~E 257 (375)
T KOG0022|consen 183 AAWNTAKVEPGSTVAVF-GLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKE----FGATEFINPKDLKKPIQEVIIE 257 (375)
T ss_pred hhhhhcccCCCCEEEEE-ecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHh----cCcceecChhhccccHHHHHHH
Confidence 99999999999999999 779999999999999999 79999999999999986 799999998852 47788999
Q ss_pred HcCCCcceEEEecCch-hHHHHHHhcccCC-eEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHH
Q psy1119 633 RTKGRGVDLVLNSLAE-EKLQASVRCLAQG-GRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQK 710 (1392)
Q Consensus 633 ~T~g~GvDvVlds~~~-~~l~~s~~~La~~-Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~ 710 (1392)
+|+| |||+-|+|.|. +.+.+++.+...| |+-|.+|.......-.+....+.++.++.|.....+-. +. .+-.
T Consensus 258 mTdg-GvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~K~-~~----~iP~ 331 (375)
T KOG0022|consen 258 MTDG-GVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGGFKS-KS----DIPK 331 (375)
T ss_pred HhcC-CceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecccccc-hh----hhhH
Confidence 9985 99999999986 6789999999998 99999997643332222222334577777776555322 11 1222
Q ss_pred HHHHHHHcCC--CCCcceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 711 ALQKAIDAGA--VQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 711 ~~~~~l~~g~--l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
.+.+ +.+++ +...+++.+|++++++||++|.+|+.+ +-||.
T Consensus 332 lV~~-y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 332 LVKD-YMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred HHHH-HHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence 2222 33343 555899999999999999999999887 55554
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-28 Score=285.57 Aligned_cols=306 Identities=26% Similarity=0.437 Sum_probs=255.2
Q ss_pred ccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee-
Q psy1119 428 LVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD- 506 (1392)
Q Consensus 428 ~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~- 506 (1392)
..+|.+..++|.+.+.|. +.+++++|+|.++|+|+.|+....|.++.. ...|.++|+|++|+|.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~--------~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~------~~~~~~~g~e~~G~v~~v 72 (323)
T cd05276 7 KEPGGPEVLELGEVPKPA--------PGPGEVLIRVAAAGVNRADLLQRQGLYPPP------PGASDILGLEVAGVVVAV 72 (323)
T ss_pred ecCCCcccceEEecCCCC--------CCCCEEEEEEEEeecCHHHHHHhCCCCCCC------CCCCCcccceeEEEEEee
Confidence 456677788888877653 688999999999999999999988865421 12367899999999863
Q ss_pred --------CCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Q psy1119 507 --------SGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGV 578 (1392)
Q Consensus 507 --------vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgV 578 (1392)
+||+|+++..+|+|++|+.++...++++|++++++++++++.++.|+|+++...+.+.+|++|+|+|++|++
T Consensus 73 g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~i 152 (323)
T cd05276 73 GPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGV 152 (323)
T ss_pred CCCCCCCCCCCEEEEecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChH
Confidence 588999987778999999999999999999999999999999999999999888899999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcc
Q psy1119 579 GQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCL 658 (1392)
Q Consensus 579 G~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~L 658 (1392)
|++++++++..|++|+++++++++.+++++ ++.+++++....++.+.+.+.+.++++|+++|+.++..+..+++++
T Consensus 153 g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~ 228 (323)
T cd05276 153 GTAAIQLAKALGARVIATAGSEEKLEACRA----LGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRAL 228 (323)
T ss_pred HHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----cCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhh
Confidence 999999999999999999999898888854 4567888888888888898888888999999999988888999999
Q ss_pred cCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhh-hhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHH
Q psy1119 659 AQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNF-FFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEE 736 (1392)
Q Consensus 659 a~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~-~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~e 736 (1392)
+++|+++.+|....... ...+ ..+.+++++.++..... ....+.....+...+.+++.++.+.+.+++.|+++++++
T Consensus 229 ~~~g~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (323)
T cd05276 229 APDGRLVLIGLLGGAKA-ELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAE 307 (323)
T ss_pred ccCCEEEEEecCCCCCC-CCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHH
Confidence 99999999986532221 1222 23468899998876543 223344445566667778888999888889999999999
Q ss_pred HHHHHHcCCccceEEE
Q psy1119 737 AFRYMAAGKHIGKVII 752 (1392)
Q Consensus 737 A~~~l~~g~~~GKvVI 752 (1392)
||+.+.++...||+|+
T Consensus 308 a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 308 AHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHHHhCCCcceEeC
Confidence 9999999888899874
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-28 Score=287.03 Aligned_cols=298 Identities=27% Similarity=0.449 Sum_probs=251.8
Q ss_pred ccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee-
Q psy1119 428 LVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD- 506 (1392)
Q Consensus 428 ~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~- 506 (1392)
...|.++.++|.+.+.|. +++++++|+|.++|+|+.|++...|.++... ..|.++|||++|+|.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~--------~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~------~~~~~~g~e~~G~v~~~ 72 (336)
T cd08276 7 SGGGGLDNLKLVEEPVPE--------PGPGEVLVRVHAVSLNYRDLLILNGRYPPPV------KDPLIPLSDGAGEVVAV 72 (336)
T ss_pred eccCCCcceEEEeccCCC--------CCCCeEEEEEEEEecCHHHHHHhcCCCCCCC------CCCcccccceeEEEEEe
Confidence 344667788898877753 6889999999999999999999988765321 1366899999999873
Q ss_pred --------CCCeEEEeec---------------------CCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHH
Q psy1119 507 --------SGKRVMGLTS---------------------GRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAM 557 (1392)
Q Consensus 507 --------vGdrV~gl~~---------------------~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL 557 (1392)
+||+|.+... .|++++|+.++...++++|+++++.+++.+++++++||+++
T Consensus 73 G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l 152 (336)
T cd08276 73 GEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNAL 152 (336)
T ss_pred CCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHH
Confidence 5788887641 47899999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCC-ccHHHHHHHHcCC
Q psy1119 558 FICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRD-TSFEQLVMKRTKG 636 (1392)
Q Consensus 558 ~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~-~~~~~~i~~~T~g 636 (1392)
...+++++|++|+|+ |+|++|++++++|++.|++|++++.++++++++++ ++.+++++.+. .++.+.+++.+++
T Consensus 153 ~~~~~~~~g~~vli~-g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~ 227 (336)
T cd08276 153 FGLGPLKPGDTVLVQ-GTGGVSLFALQFAKAAGARVIATSSSDEKLERAKA----LGADHVINYRTTPDWGEEVLKLTGG 227 (336)
T ss_pred HhhcCCCCCCEEEEE-CCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCCEEEcCCcccCHHHHHHHHcCC
Confidence 888999999999999 67999999999999999999999999999999976 46788998877 7888899999998
Q ss_pred CcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHH
Q psy1119 637 RGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAI 716 (1392)
Q Consensus 637 ~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l 716 (1392)
+|+|+++|+.++..+..++++++++|+++.+|..+...........+.+++++.++.... ......+.+++
T Consensus 228 ~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~ 298 (336)
T cd08276 228 RGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS---------RAQFEAMNRAI 298 (336)
T ss_pred CCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc---------HHHHHHHHHHH
Confidence 999999999988889999999999999999997654433333446678999999986542 12344455667
Q ss_pred HcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 717 DAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 717 ~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
.++.+.+.+.++|+++++.+||+.+.+++..||+|++
T Consensus 299 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 299 EAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred HcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 7888888778899999999999999999999999875
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-28 Score=283.61 Aligned_cols=303 Identities=25% Similarity=0.373 Sum_probs=253.3
Q ss_pred cCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---
Q psy1119 429 VRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR--- 505 (1392)
Q Consensus 429 ~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~--- 505 (1392)
.+|.+..+.|.+.|.|. +.+++++|+|.++|+|+.|+....|.++.. ...|.++|||++|+|.
T Consensus 8 ~~~~~~~~~~~~~~~~~--------l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~------~~~~~~~g~e~~G~v~~~g 73 (325)
T cd08253 8 EFGAPDVLRLGDLPVPT--------PGPGEVLVRVHASGVNPVDTYIRAGAYPGL------PPLPYVPGSDGAGVVEAVG 73 (325)
T ss_pred ccCCcccceeeecCCCC--------CCCCEEEEEEEEEecChhHhhhccCCCCCC------CCCCeecccceEEEEEeeC
Confidence 34556678888887764 688999999999999999999888865422 1236789999999987
Q ss_pred ------eCCCeEEEee-----cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcC
Q psy1119 506 ------DSGKRVMGLT-----SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAG 574 (1392)
Q Consensus 506 ------~vGdrV~gl~-----~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga 574 (1392)
++||+|+++. ..|++++|+.++...++++|+++++++||++++++.|||+++...+++.+|++|+|+|+
T Consensus 74 ~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~ 153 (325)
T cd08253 74 EGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGG 153 (325)
T ss_pred CCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcC
Confidence 3688998875 25889999999999999999999999999999999999999988899999999999999
Q ss_pred CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHH
Q psy1119 575 SGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQAS 654 (1392)
Q Consensus 575 ~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s 654 (1392)
+|++|++++++|+..|++|++++.++++++++++ ++.+++++..+.++.+.+++.++++++|+|+|+.++......
T Consensus 154 ~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~ 229 (325)
T cd08253 154 SGAVGHAAVQLARWAGARVIATASSAEGAELVRQ----AGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKD 229 (325)
T ss_pred CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHH
Confidence 9999999999999999999999999999999865 567888988888888889888888899999999988888899
Q ss_pred HhcccCCeEEEEEcccccccCcccccc-ccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeecccc
Q psy1119 655 VRCLAQGGRFLEIGKFDLANNNMLGME-VFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDK 733 (1392)
Q Consensus 655 ~~~La~~Gr~v~iG~~~~~~~~~l~~~-~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~e 733 (1392)
+++++++|+++.+|..+ . .....+. ++.++.++.+..+. ...+.....+.+.+.+++.++.+++.+.++|++++
T Consensus 230 ~~~l~~~g~~v~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 304 (325)
T cd08253 230 LDVLAPGGRIVVYGSGG-L-RGTIPINPLMAKEASIRGVLLY---TATPEERAAAAEAIAAGLADGALRPVIAREYPLEE 304 (325)
T ss_pred HHhhCCCCEEEEEeecC-C-cCCCChhHHHhcCceEEeeehh---hcCHHHHHHHHHHHHHHHHCCCccCccccEEcHHH
Confidence 99999999999998654 1 1122222 36677888776532 23344445566667778888989888889999999
Q ss_pred HHHHHHHHHcCCccceEEEEe
Q psy1119 734 VEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 734 v~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+.++|+.+..+...||+++++
T Consensus 305 ~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 305 AAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred HHHHHHHHHcCCCcceEEEeC
Confidence 999999999999999998753
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-28 Score=287.61 Aligned_cols=296 Identities=19% Similarity=0.254 Sum_probs=240.7
Q ss_pred ccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee-
Q psy1119 428 LVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD- 506 (1392)
Q Consensus 428 ~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~- 506 (1392)
..+| ...+.+.+.+.|. +.+++++|+|.++++|++|+....|.++.. ...+.++|+|++|+|++
T Consensus 7 ~~~~-~~~~~~~~~~~~~--------~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~------~~~~~~~g~e~~G~V~~v 71 (341)
T cd08297 7 EEFG-EKPYEVKDVPVPE--------PGPGEVLVKLEASGVCHTDLHAALGDWPVK------PKLPLIGGHEGAGVVVAV 71 (341)
T ss_pred eccC-CCCceEEEeeCCC--------CCCCeEEEEEEEeecchhHHHHHcCCCCcC------CCCCccCCcccceEEEEe
Confidence 3455 5678888887765 688999999999999999999998877532 11245789999999873
Q ss_pred --------CCCeEEEee----------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHH
Q psy1119 507 --------SGKRVMGLT----------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVY 550 (1392)
Q Consensus 507 --------vGdrV~gl~----------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~ 550 (1392)
+||+|+.+. ..|++++|+.+++..++++|++++++++|++++.+
T Consensus 72 G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~ 151 (341)
T cd08297 72 GPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAG 151 (341)
T ss_pred CCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcch
Confidence 578887641 25789999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHH
Q psy1119 551 ATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLV 630 (1392)
Q Consensus 551 ~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i 630 (1392)
.|||+++.. .++++|++|||||+++++|++++++|+++|++|+++++++++++++++ ++.+++++.++.++.+.+
T Consensus 152 ~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~ 226 (341)
T cd08297 152 VTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKE----LGADAFVDFKKSDDVEAV 226 (341)
T ss_pred HHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----cCCcEEEcCCCccHHHHH
Confidence 999999866 489999999999998899999999999999999999999999998854 567889999888899999
Q ss_pred HHHcCCCcceEEEecC-chhHHHHHHhcccCCeEEEEEcccccccCcccc-ccccCCCcEEEEEechhhhhhCHHHHHHH
Q psy1119 631 MKRTKGRGVDLVLNSL-AEEKLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVMLDNFFFAEQEWKMSL 708 (1392)
Q Consensus 631 ~~~T~g~GvDvVlds~-~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~~ 708 (1392)
.+.++++|+|++||+. +++.+..++++++++|+++.+|..+... .... .....+++++.+..... ...
T Consensus 227 ~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~ 296 (341)
T cd08297 227 KELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGF-IPLDPFDLVLRGITIVGSLVGT---------RQD 296 (341)
T ss_pred HHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCC-CCCCHHHHHhcccEEEEeccCC---------HHH
Confidence 9999889999999954 5678899999999999999998653211 1111 12236778877743211 123
Q ss_pred HHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 709 QKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 709 ~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
.+.+.++++++.+++. .++|+++++.+||+.+.++++.||+|+++
T Consensus 297 ~~~~~~~~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 297 LQEALEFAARGKVKPH-IQVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred HHHHHHHHHcCCCcce-eEEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 3445567888888774 46799999999999999999999999864
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-28 Score=292.05 Aligned_cols=288 Identities=19% Similarity=0.251 Sum_probs=234.1
Q ss_pred ceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee---------
Q psy1119 436 LTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD--------- 506 (1392)
Q Consensus 436 l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~--------- 506 (1392)
++..+.+.|. +.+++|+|||.++|+|+.|++...|.++.. .|.++|+|++|+|.+
T Consensus 15 ~~~~~~~~p~--------~~~~~v~Vkv~a~gi~~~d~~~~~g~~~~~--------~p~v~G~e~~G~V~~vG~~v~~~~ 78 (365)
T cd08278 15 FVLEDVELDD--------PRPDEVLVRIVATGICHTDLVVRDGGLPTP--------LPAVLGHEGAGVVEAVGSAVTGLK 78 (365)
T ss_pred ceEEEeecCC--------CCCCeEEEEEEEeecCcccHHHhcCCCCCC--------CCcccccceeEEEEEeCCCcccCC
Confidence 5666777664 688999999999999999999998876521 367899999999873
Q ss_pred CCCeEEEe-------------------------------------------------ecCCcccceEEecccceEEcCCC
Q psy1119 507 SGKRVMGL-------------------------------------------------TSGRSLANCCETDVEMAWEIPDQ 537 (1392)
Q Consensus 507 vGdrV~gl-------------------------------------------------~~~g~~a~~v~~~~~~~~~iPd~ 537 (1392)
+||+|++. ...|+|++|+.+++..++++|++
T Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 79 PGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 67888741 11378999999999999999999
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCCCcC
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIKEE 616 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~~~ 616 (1392)
+++++|+.++++++||++++...+.+++|++||||| +|++|++++|+|+++|++ |++++.+++|.+++++ ++++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~----~g~~ 233 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKE----LGAT 233 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH----cCCc
Confidence 999999999999999999998889999999999995 699999999999999995 7788888888887765 5778
Q ss_pred ceeeCCCccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCcccccccc-CCCcEEEEEec
Q psy1119 617 NIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVF-MRETSFHGVML 694 (1392)
Q Consensus 617 ~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~-~k~~s~~g~~~ 694 (1392)
++++.++.++.+.+++.+ ++|+|+|+|+.+. ..+..++++++++|+++.+|..+......+.+..+ .+++++.++..
T Consensus 234 ~~i~~~~~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (365)
T cd08278 234 HVINPKEEDLVAAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIE 312 (365)
T ss_pred EEecCCCcCHHHHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeec
Confidence 999988888888899888 7899999999974 67899999999999999999764322223333333 78899988764
Q ss_pred hhhhhhCHHHHHHHHHHHHHHHHcCCCCC-cceeeeccccHHHHHHHHHcCCccceEEE
Q psy1119 695 DNFFFAEQEWKMSLQKALQKAIDAGAVQP-LVRTIFPEDKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~l~~g~l~p-l~~~vf~l~ev~eA~~~l~~g~~~GKvVI 752 (1392)
... .+ ...+..+.+++.+|.+.+ .+.+.|+++++++||+.+.+++.+ |+|+
T Consensus 313 ~~~---~~---~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~ 364 (365)
T cd08278 313 GDS---VP---QEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVL 364 (365)
T ss_pred CCc---Ch---HHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEE
Confidence 321 11 234445557788888854 245689999999999999888765 7765
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.6e-28 Score=282.11 Aligned_cols=308 Identities=25% Similarity=0.437 Sum_probs=256.1
Q ss_pred ccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--
Q psy1119 428 LVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-- 505 (1392)
Q Consensus 428 ~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-- 505 (1392)
..+|.+..++|.+.+.+. +++++++|+|.++++|++|++...|.++.. ...|.++|||++|+|.
T Consensus 7 ~~~~~~~~~~~~~~~~~~--------l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~------~~~~~~~g~e~~G~v~~v 72 (325)
T TIGR02824 7 TEPGGPEVLVLVEVPLPV--------PKAGEVLIRVAAAGVNRPDLLQRAGKYPPP------PGASDILGLEVAGEVVAV 72 (325)
T ss_pred ccCCCcccceEEeCCCCC--------CCCCEEEEEEEEEecCHHHHHHhcCCCCCC------CCCCCCccceeEEEEEEe
Confidence 345666778887776642 688999999999999999999988765421 1135789999999986
Q ss_pred -------eCCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Q psy1119 506 -------DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGV 578 (1392)
Q Consensus 506 -------~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgV 578 (1392)
++||+|+++..+|++++|+.++...++++|+++++.++++++++++|+|+++...+++++|++|+|||++|++
T Consensus 73 g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~ 152 (325)
T TIGR02824 73 GEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGI 152 (325)
T ss_pred CCCCCCCCCCCEEEEccCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchH
Confidence 3688999987668999999999999999999999999999999999999999889999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcc
Q psy1119 579 GQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCL 658 (1392)
Q Consensus 579 G~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~L 658 (1392)
|++++++|+..|++|+++++++++.+++++ ++.+.+++....++.+.+.+.++++++|+++|+.++.....+++|+
T Consensus 153 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l 228 (325)
T TIGR02824 153 GTTAIQLAKAFGARVFTTAGSDEKCAACEA----LGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKAL 228 (325)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhh
Confidence 999999999999999999999988888854 4567888888888888899888888999999999888888999999
Q ss_pred cCCeEEEEEcccccccCccccccc-cCCCcEEEEEechh-hhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHH
Q psy1119 659 AQGGRFLEIGKFDLANNNMLGMEV-FMRETSFHGVMLDN-FFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEE 736 (1392)
Q Consensus 659 a~~Gr~v~iG~~~~~~~~~l~~~~-~~k~~s~~g~~~~~-~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~e 736 (1392)
+++|+++.+|..+.... ...+.. +.+++++.++.... .....+.....+...+.+++.++.+.+.+++.|+++++.+
T Consensus 229 ~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 307 (325)
T TIGR02824 229 ALDGRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQ 307 (325)
T ss_pred ccCcEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHH
Confidence 99999999986543222 223333 47899999987655 2333344445556666778888989888888999999999
Q ss_pred HHHHHHcCCccceEEEEe
Q psy1119 737 AFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 737 A~~~l~~g~~~GKvVI~~ 754 (1392)
+|+.+.+++..||+|+++
T Consensus 308 ~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 308 AHALMESGDHIGKIVLTV 325 (325)
T ss_pred HHHHHHhCCCcceEEEeC
Confidence 999999999999998763
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=265.47 Aligned_cols=296 Identities=17% Similarity=0.217 Sum_probs=242.6
Q ss_pred CCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-------
Q psy1119 433 MSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR------- 505 (1392)
Q Consensus 433 l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~------- 505 (1392)
++++++++.+.|+ |+++||++|..|.|+++ ...|++.... ....|..+|-...|-++
T Consensus 24 ~d~F~lee~~vp~--------p~~GqvLl~~~ylS~DP----ymRgrm~d~~----SY~~P~~lG~~~~gg~V~~Vv~S~ 87 (340)
T COG2130 24 PDDFRLEEVDVPE--------PGEGQVLLRTLYLSLDP----YMRGRMSDAP----SYAPPVELGEVMVGGTVAKVVASN 87 (340)
T ss_pred CCCceeEeccCCC--------CCcCceEEEEEEeccCH----HHeecccCCc----ccCCCcCCCceeECCeeEEEEecC
Confidence 3568899999886 79999999999999988 2344443221 12346677777665432
Q ss_pred ----eCCCeEEEeecCCcccceEEecccceEEcCCC---CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Q psy1119 506 ----DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQ---WTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGV 578 (1392)
Q Consensus 506 ----~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~---ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgV 578 (1392)
+.||-|.+.. +|++|..++...+.|++++ +++.- ..+..+..|||++|.+.++.++||+|+|.+|+|+|
T Consensus 88 ~~~f~~GD~V~~~~---GWq~y~i~~~~~l~Kvd~~~~pl~~~L-gvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaV 163 (340)
T COG2130 88 HPGFQPGDIVVGVS---GWQEYAISDGEGLRKLDPSPAPLSAYL-GVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAV 163 (340)
T ss_pred CCCCCCCCEEEecc---cceEEEeechhhceecCCCCCCcchHH-hhcCCchHHHHHHHHHhcCCCCCCEEEEEeccccc
Confidence 5899998864 7999999999999999753 23332 34556899999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcc
Q psy1119 579 GQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCL 658 (1392)
Q Consensus 579 G~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~L 658 (1392)
|..+.||||..||+|+.+++++||.+++++ .++.|.++|+++++|.+.+.+..+ +|+|+.||+++++.+++.+..|
T Consensus 164 GsvvgQiAKlkG~rVVGiaGg~eK~~~l~~---~lGfD~~idyk~~d~~~~L~~a~P-~GIDvyfeNVGg~v~DAv~~~l 239 (340)
T COG2130 164 GSVVGQIAKLKGCRVVGIAGGAEKCDFLTE---ELGFDAGIDYKAEDFAQALKEACP-KGIDVYFENVGGEVLDAVLPLL 239 (340)
T ss_pred chHHHHHHHhhCCeEEEecCCHHHHHHHHH---hcCCceeeecCcccHHHHHHHHCC-CCeEEEEEcCCchHHHHHHHhh
Confidence 999999999999999999999999999998 478999999999999999999987 7999999999999999999999
Q ss_pred cCCeEEEEEcccccccCccccc------cccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccc
Q psy1119 659 AQGGRFLEIGKFDLANNNMLGM------EVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPED 732 (1392)
Q Consensus 659 a~~Gr~v~iG~~~~~~~~~l~~------~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ 732 (1392)
+.++|++.+|.....++...+. .++.+.+++.|+.....+. ++..+..+.+..++++|+++-..+.+-.++
T Consensus 240 n~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~---~~~~e~~~~l~~wv~~GKi~~~eti~dGlE 316 (340)
T COG2130 240 NLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYD---QRFPEALRELGGWVKEGKIQYRETIVDGLE 316 (340)
T ss_pred ccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhh---hhhHHHHHHHHHHHHcCceeeEeeehhhhh
Confidence 9999999999765555442221 2345678899987644333 333466677788999999998876666799
Q ss_pred cHHHHHHHHHcCCccceEEEEec
Q psy1119 733 KVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 733 ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
.+++||..|-+|++.||+|+++.
T Consensus 317 naP~Af~gLl~G~N~GK~vvKv~ 339 (340)
T COG2130 317 NAPEAFIGLLSGKNFGKLVVKVA 339 (340)
T ss_pred ccHHHHHHHhcCCccceEEEEec
Confidence 99999999999999999999875
|
|
| >cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-28 Score=284.52 Aligned_cols=303 Identities=21% Similarity=0.298 Sum_probs=242.6
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
+...++|.+.+++|.+.+.|. +.+++++|+|.++|+|+.|+.+..|.++.. ...|+++|+|++|+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~------~~~~~~~g~e~~G~v 69 (331)
T cd08273 4 VVVTRRGGPEVLKVVEADLPE--------PAAGEVVVKVEASGVSFADVQMRRGLYPDQ------PPLPFTPGYDLVGRV 69 (331)
T ss_pred EEEccCCCcccEEEeccCCCC--------CCCCeEEEEEEEEecCHHHHHHhCCCCCCC------CCCCcccccceEEEE
Confidence 345567888889999988875 688999999999999999999998876432 123678999999998
Q ss_pred e---------eCCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCC
Q psy1119 505 R---------DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGS 575 (1392)
Q Consensus 505 ~---------~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~ 575 (1392)
. ++||+|+++...|++++|+.++.+.++++|++++++++++++++++|||+++...+++.+|++|+|||++
T Consensus 70 ~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~ 149 (331)
T cd08273 70 DALGSGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGAS 149 (331)
T ss_pred EEeCCCCccCCCCCEEEEeCCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCC
Confidence 6 3588999886558899999999999999999999999999999999999999888899999999999999
Q ss_pred chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHH
Q psy1119 576 GGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASV 655 (1392)
Q Consensus 576 GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~ 655 (1392)
|++|++++++|+..|++|++++. +++++++++ ++... ++....++.+. +. .++|+|+++|++++..+..++
T Consensus 150 g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~~----~g~~~-~~~~~~~~~~~--~~-~~~~~d~vl~~~~~~~~~~~~ 220 (331)
T cd08273 150 GGVGQALLELALLAGAEVYGTAS-ERNHAALRE----LGATP-IDYRTKDWLPA--ML-TPGGVDVVFDGVGGESYEESY 220 (331)
T ss_pred cHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHHH----cCCeE-EcCCCcchhhh--hc-cCCCceEEEECCchHHHHHHH
Confidence 99999999999999999999997 888888865 45443 45555555444 33 335899999999988899999
Q ss_pred hcccCCeEEEEEcccccccCcccc---------------ccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCC
Q psy1119 656 RCLAQGGRFLEIGKFDLANNNMLG---------------MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGA 720 (1392)
Q Consensus 656 ~~La~~Gr~v~iG~~~~~~~~~l~---------------~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 720 (1392)
+|++++|+++.+|.........+. +..+.++.++.++.. .....+.......+.+.+++.+|.
T Consensus 221 ~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~ 298 (331)
T cd08273 221 AALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWR--DRAEDPKLFRQDLTELLDLLAKGK 298 (331)
T ss_pred HHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeech--hcccCHHHHHHHHHHHHHHHHCCC
Confidence 999999999999976543322111 122233445555443 223344444456666778899999
Q ss_pred CCCcceeeeccccHHHHHHHHHcCCccceEEE
Q psy1119 721 VQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 721 l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI 752 (1392)
+++.+.++|+++++++||+.+.+++..||+|+
T Consensus 299 l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 299 IRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred ccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 99888889999999999999999999999875
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-28 Score=288.20 Aligned_cols=287 Identities=22% Similarity=0.307 Sum_probs=236.2
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-------- 505 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-------- 505 (1392)
..+.+.+.|.|. +.+++++|+|.++++|+.|+.+..|.++.. ..|.++|+|++|+|.
T Consensus 10 ~~~~~~~~~~~~--------~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~-------~~~~~~g~e~~G~V~~~G~~v~~ 74 (337)
T cd08261 10 GRLEVVDIPEPV--------PGAGEVLVRVKRVGICGSDLHIYHGRNPFA-------SYPRILGHELSGEVVEVGEGVAG 74 (337)
T ss_pred CceEEEECCCCC--------CCCCeEEEEEEEEeEcccChHHHcCCCCcC-------CCCcccccccEEEEEEeCCCCCC
Confidence 357788888775 689999999999999999999998876532 125689999999987
Q ss_pred -eCCCeEEE---------------------------eecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHH
Q psy1119 506 -DSGKRVMG---------------------------LTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAM 557 (1392)
Q Consensus 506 -~vGdrV~g---------------------------l~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL 557 (1392)
++||+|++ +...|+|++|+.+++. ++++|+++++++|+++ .+++++++++
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~ 152 (337)
T cd08261 75 LKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV 152 (337)
T ss_pred CCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH
Confidence 36889986 3335899999999999 9999999999999987 5788999988
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCC
Q psy1119 558 FICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGR 637 (1392)
Q Consensus 558 ~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~ 637 (1392)
..+++++|++|||| |+|++|++++|+|+.+|++|+++++++++.+++++ ++.++++++++.++.+.+.+.++++
T Consensus 153 -~~~~l~~g~~vLI~-g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~----~g~~~v~~~~~~~~~~~l~~~~~~~ 226 (337)
T cd08261 153 -RRAGVTAGDTVLVV-GAGPIGLGVIQVAKARGARVIVVDIDDERLEFARE----LGADDTINVGDEDVAARLRELTDGE 226 (337)
T ss_pred -HhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHH----hCCCEEecCcccCHHHHHHHHhCCC
Confidence 78899999999999 56999999999999999999999999999999965 4688999999888999999999888
Q ss_pred cceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHH
Q psy1119 638 GVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKA 715 (1392)
Q Consensus 638 GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~ 715 (1392)
++|++||+.++ +.+..++++++++|+++.+|..+.. ..... .+..+++++.+... . .....+.+.++
T Consensus 227 ~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~--~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~l 295 (337)
T cd08261 227 GADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGP--VTFPDPEFHKKELTILGSRN-----A----TREDFPDVIDL 295 (337)
T ss_pred CCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCC--CccCHHHHHhCCCEEEEecc-----C----ChhhHHHHHHH
Confidence 99999999865 6788999999999999999865421 11111 22346677766421 1 12234455678
Q ss_pred HHcCCCCC--cceeeeccccHHHHHHHHHcC-CccceEEEEe
Q psy1119 716 IDAGAVQP--LVRTIFPEDKVEEAFRYMAAG-KHIGKVIIKI 754 (1392)
Q Consensus 716 l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g-~~~GKvVI~~ 754 (1392)
+.+|.+++ .+..+|+++++.+|++.+.++ .+.||+|+++
T Consensus 296 ~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 296 LESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred HHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 88999998 678899999999999999998 4889999864
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=281.93 Aligned_cols=306 Identities=24% Similarity=0.367 Sum_probs=257.4
Q ss_pred ccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--
Q psy1119 428 LVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-- 505 (1392)
Q Consensus 428 ~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-- 505 (1392)
...+.+..+.|.+.+.|. +.+++++|+|.++++|+.|+.+..|.++.. ...+.++|||++|+|.
T Consensus 7 ~~~~~~~~~~~~~~~~~~--------~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~------~~~~~~~g~e~~G~v~~~ 72 (328)
T cd08268 7 HQFGGPEVLRIEELPVPA--------PGAGEVLIRVEAIGLNRADAMFRRGAYIEP------PPLPARLGYEAAGVVEAV 72 (328)
T ss_pred eccCCcceeEEeecCCCC--------CCCCeEEEEEEEEecChHHhheeccccCCC------CCCCCCCCcceEEEEEee
Confidence 345667788888877753 688999999999999999999888765432 1225689999999986
Q ss_pred -------eCCCeEEEeec-----CCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEc
Q psy1119 506 -------DSGKRVMGLTS-----GRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHA 573 (1392)
Q Consensus 506 -------~vGdrV~gl~~-----~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~g 573 (1392)
++||+|+++.. .|++++|+.++.+.++++|+++++++++.++++++|||+++...+.+.++++|+|+|
T Consensus 73 G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g 152 (328)
T cd08268 73 GAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITA 152 (328)
T ss_pred CCCCCcCCCCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEec
Confidence 36889988742 478999999999999999999999999999999999999998889999999999999
Q ss_pred CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHH
Q psy1119 574 GSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQA 653 (1392)
Q Consensus 574 a~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~ 653 (1392)
++|++|++++++|+..|++|++++.++++++++++ ++.+.+++.+..++.+.+.+.+.++++|+++|+.++.....
T Consensus 153 ~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~ 228 (328)
T cd08268 153 ASSSVGLAAIQIANAAGATVIATTRTSEKRDALLA----LGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAK 228 (328)
T ss_pred CccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----cCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHH
Confidence 99999999999999999999999999999999865 45678888888888888988888889999999999888899
Q ss_pred HHhcccCCeEEEEEcccccccCcccccc-ccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccc
Q psy1119 654 SVRCLAQGGRFLEIGKFDLANNNMLGME-VFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPED 732 (1392)
Q Consensus 654 s~~~La~~Gr~v~iG~~~~~~~~~l~~~-~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ 732 (1392)
++++++++|+++.+|..+.. ...+... .+.+++++.++.+..+. ..+.......+.+..++.++.+.+.+...|+++
T Consensus 229 ~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (328)
T cd08268 229 LADALAPGGTLVVYGALSGE-PTPFPLKAALKKSLTFRGYSLDEIT-LDPEARRRAIAFILDGLASGALKPVVDRVFPFD 306 (328)
T ss_pred HHHhhccCCEEEEEEeCCCC-CCCCchHHHhhcCCEEEEEeccccc-CCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHH
Confidence 99999999999999876542 2222322 57889999998766544 444455556666677788888888888899999
Q ss_pred cHHHHHHHHHcCCccceEEEE
Q psy1119 733 KVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 733 ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
++.++|+++..++..||+|++
T Consensus 307 ~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 307 DIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred HHHHHHHHHHcCCCCceEEEe
Confidence 999999999999999999875
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.9e-28 Score=282.31 Aligned_cols=304 Identities=24% Similarity=0.356 Sum_probs=251.5
Q ss_pred eccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-
Q psy1119 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR- 505 (1392)
Q Consensus 427 ~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~- 505 (1392)
...+|.++.++|.+.+.|. +.+++|+|+|.++|+|+.|+....|.++.. ...+.++|+|++|+|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~--------~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~------~~~~~~~g~e~~G~v~~ 71 (326)
T cd08272 6 LESFGGPEVFELREVPRPQ--------PGPGQVLVRVHASGVNPLDTKIRRGGAAAR------PPLPAILGCDVAGVVEA 71 (326)
T ss_pred EccCCCchheEEeecCCCC--------CCCCeEEEEEEEEecCHHHHHHhCCCCCCC------CCCCcccccceeEEEEE
Confidence 3456777778888877753 688999999999999999999988865421 1125689999999986
Q ss_pred --------eCCCeEEEee-----cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEE
Q psy1119 506 --------DSGKRVMGLT-----SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIH 572 (1392)
Q Consensus 506 --------~vGdrV~gl~-----~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ 572 (1392)
++||+|+++. ..|++++|+.++...++++|+++++++++.+++++.+||+++...+++++|++|+||
T Consensus 72 ~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~ 151 (326)
T cd08272 72 VGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIH 151 (326)
T ss_pred eCCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEE
Confidence 3688998875 257899999999999999999999999999999999999999889999999999999
Q ss_pred cCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHH
Q psy1119 573 AGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQ 652 (1392)
Q Consensus 573 ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~ 652 (1392)
|++|++|++++++|+..|++|++++++ ++.+++++ ++.+++++.... +.+.+++.++++|+|+++|+.++..+.
T Consensus 152 g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~~----~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~~~ 225 (326)
T cd08272 152 GGAGGVGHVAVQLAKAAGARVYATASS-EKAAFARS----LGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGETLD 225 (326)
T ss_pred cCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHHH----cCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChHHHH
Confidence 999999999999999999999999988 88888865 456788888777 888999999989999999999888888
Q ss_pred HHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechh--hhhhCHHHHHHHHHHHHHHHHcCCCCCcce-eee
Q psy1119 653 ASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDN--FFFAEQEWKMSLQKALQKAIDAGAVQPLVR-TIF 729 (1392)
Q Consensus 653 ~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~--~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~-~vf 729 (1392)
.+++|++++|+++.+|... ...+... ..+++++.++.+.. +....+.........+.+++.++.+++.++ +.|
T Consensus 226 ~~~~~l~~~g~~v~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 301 (326)
T cd08272 226 ASFEAVALYGRVVSILGGA---THDLAPL-SFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTF 301 (326)
T ss_pred HHHHHhccCCEEEEEecCC---ccchhhH-hhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccccccccee
Confidence 8999999999999998653 1112222 26788888876543 322334444556666777888898888755 899
Q ss_pred ccccHHHHHHHHHcCCccceEEEEe
Q psy1119 730 PEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 730 ~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+++++++||+.+.+++..||+|+++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 302 PLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred cHHHHHHHHHHHHcCCcccEEEEEC
Confidence 9999999999999988899998763
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.5e-28 Score=292.18 Aligned_cols=307 Identities=20% Similarity=0.281 Sum_probs=242.4
Q ss_pred cCCCC-CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhh-hhhhc--cccc-cccceeeEEE
Q psy1119 429 VRGDM-SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEV-IESRR--LYQH-CVIGFEYSGR 503 (1392)
Q Consensus 429 ~~G~l-~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~-~~~~~--~~~p-~~lG~E~sGv 503 (1392)
+.|++ +.+++.+.|.|. +.+++++|++.++|+|+.|++...|...... ..+.. ...+ .++|||++|+
T Consensus 17 ~~~~~~~~~~~~~~~~p~--------l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~G~ 88 (398)
T TIGR01751 17 RDGDPRQAIQLEVVPVPE--------LGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDASGV 88 (398)
T ss_pred cCCCcccceEEeecCCCC--------CCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceEEE
Confidence 35665 678999888875 6899999999999999999998877431110 00000 0112 2799999999
Q ss_pred Ee---------eCCCeEEEee----------------------------cCCcccceEEecccceEEcCCCCCHhhHhhh
Q psy1119 504 LR---------DSGKRVMGLT----------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATV 546 (1392)
Q Consensus 504 V~---------~vGdrV~gl~----------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~l 546 (1392)
|+ ++||+|+++. ..|+|++|+.+++..++++|+++++++|+.+
T Consensus 89 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~~ 168 (398)
T TIGR01751 89 VWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACP 168 (398)
T ss_pred EEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHhhc
Confidence 87 3688887753 2488999999999999999999999999999
Q ss_pred hHHHHHHHHHHHH--hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCc
Q psy1119 547 PCVYATAVYAMFI--CGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDT 624 (1392)
Q Consensus 547 p~~~~TA~~aL~~--~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~ 624 (1392)
+++++|||+++.. .+++++|++|+|||++|++|++++|+|+++|+++++++.++++++++++ +++++++|.++.
T Consensus 169 ~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~----~g~~~~v~~~~~ 244 (398)
T TIGR01751 169 GLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRE----LGAEAVIDRNDF 244 (398)
T ss_pred cchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH----cCCCEEecCCCc
Confidence 9999999999865 5789999999999999999999999999999999998889999999976 577888886432
Q ss_pred ----------------------cHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccc
Q psy1119 625 ----------------------SFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEV 682 (1392)
Q Consensus 625 ----------------------~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~ 682 (1392)
+|.+.+.+.++++|+|+|||++++..+..++++++++|+++.+|.............+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 324 (398)
T TIGR01751 245 GHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYL 324 (398)
T ss_pred chhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCcCHHHH
Confidence 3667888899989999999999988889999999999999999975432111111123
Q ss_pred cCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEecC
Q psy1119 683 FMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRD 756 (1392)
Q Consensus 683 ~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~ 756 (1392)
+.++.++.+...... +. .+.+.++++++.+.+.+.++|+++++++||+.+.+++..||+|+.+..
T Consensus 325 ~~~~~~~~~~~~~~~--------~~-~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 389 (398)
T TIGR01751 325 WMRQKRIQGSHFANL--------RE-AWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLA 389 (398)
T ss_pred hhcccEEEccccCcH--------HH-HHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeCC
Confidence 345556655433221 11 234556788899988888999999999999999999999999988854
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-28 Score=287.96 Aligned_cols=291 Identities=21% Similarity=0.301 Sum_probs=229.7
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~-------- 506 (1392)
.+.+.+.+.|. +.+++|+|+|.|+|+|+.|++...|.++.. ..|.++|||++|+|++
T Consensus 11 ~~~l~~~~~p~--------~~~~evlIkv~a~~i~~~d~~~~~g~~~~~-------~~~~~~G~e~~G~V~~vG~~v~~~ 75 (351)
T cd08285 11 KVGWIEKPIPV--------CGPNDAIVRPTAVAPCTSDVHTVWGGAPGE-------RHGMILGHEAVGVVEEVGSEVKDF 75 (351)
T ss_pred ccEEEECCCCC--------CCCCeEEEEEEEEEechhhHHHhcCCCCCC-------CCCcccCcceEEEEEEecCCcCcc
Confidence 36778887764 688999999999999999999888765431 1367999999999873
Q ss_pred -CCCeEEEee------------------------------cCCcccceEEeccc--ceEEcCCCCCHhhHhhhhHHHHHH
Q psy1119 507 -SGKRVMGLT------------------------------SGRSLANCCETDVE--MAWEIPDQWTLEDAATVPCVYATA 553 (1392)
Q Consensus 507 -vGdrV~gl~------------------------------~~g~~a~~v~~~~~--~~~~iPd~ls~e~AA~lp~~~~TA 553 (1392)
+||+|++.. ..|+|++|+.++.. .++++|++++++++|.++++++||
T Consensus 76 ~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta 155 (351)
T cd08285 76 KPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTG 155 (351)
T ss_pred CCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhH
Confidence 588888732 24789999999974 899999999999999999999999
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHH
Q psy1119 554 VYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMK 632 (1392)
Q Consensus 554 ~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~ 632 (1392)
++++ ..+++++|++|||+ |+|++|++++|+|+++|++ |++|.++++|.+++++ ++.++++++++.++.+.+++
T Consensus 156 ~~~~-~~~~~~~g~~vlI~-g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~----~g~~~~v~~~~~~~~~~i~~ 229 (351)
T cd08285 156 FHGA-ELANIKLGDTVAVF-GIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKE----YGATDIVDYKNGDVVEQILK 229 (351)
T ss_pred HHHH-HccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH----cCCceEecCCCCCHHHHHHH
Confidence 9996 77899999999999 5699999999999999995 7788888888877765 67789999988889899999
Q ss_pred HcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCcccccccc---CCCcEEEEEechhhhhhCHHHHHHH
Q psy1119 633 RTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVF---MRETSFHGVMLDNFFFAEQEWKMSL 708 (1392)
Q Consensus 633 ~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~---~k~~s~~g~~~~~~~~~~~~~~~~~ 708 (1392)
.+.++++|++||+.++ ..+..++++++++|+++.+|.........+....+ .+..++.+... ...+ +.
T Consensus 230 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~----~~ 301 (351)
T cd08285 230 LTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLC----PGGR----LR 301 (351)
T ss_pred HhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeec----CCcc----cc
Confidence 8888899999999986 57899999999999999998654321111111112 23444444221 1112 22
Q ss_pred HHHHHHHHHcCCCCC---cceeeeccccHHHHHHHHHcCCc-cceEEEEe
Q psy1119 709 QKALQKAIDAGAVQP---LVRTIFPEDKVEEAFRYMAAGKH-IGKVIIKI 754 (1392)
Q Consensus 709 ~~~~~~~l~~g~l~p---l~~~vf~l~ev~eA~~~l~~g~~-~GKvVI~~ 754 (1392)
+..+.+++++|++++ ...++|+++++++||+.+.+++. .+|++|.+
T Consensus 302 ~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 302 MERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred HHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 344567889999988 34567999999999999999874 67988853
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-27 Score=279.83 Aligned_cols=305 Identities=25% Similarity=0.324 Sum_probs=250.6
Q ss_pred eeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
....+++.+.+.|.+.|.|. +.+++++|+|.++|+|+.|+....|.+... ..+.++|||++|+|.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~--------~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-------~~~~~~g~e~~G~v~ 69 (325)
T cd08271 5 VLPKPGAALQLTLEEIEIPG--------PGAGEVLVKVHAAGLNPVDWKVIAWGPPAW-------SYPHVPGVDGAGVVV 69 (325)
T ss_pred EEccCCCcceeEEeccCCCC--------CCCCEEEEEEEEEecCHHHHHHhcCCCCCC-------CCCcccccceEEEEE
Confidence 34456666689999988875 689999999999999999999887765321 115689999999986
Q ss_pred ---------eCCCeEEEee---cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEc
Q psy1119 506 ---------DSGKRVMGLT---SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHA 573 (1392)
Q Consensus 506 ---------~vGdrV~gl~---~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~g 573 (1392)
++||+|+++. ..|++++|+.++...++++|+++++.+++.++++++||++++...+++++|++|+|||
T Consensus 70 ~~G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g 149 (325)
T cd08271 70 AVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITG 149 (325)
T ss_pred EeCCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEC
Confidence 3678888874 3578999999999999999999999999999999999999998889999999999999
Q ss_pred CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHH
Q psy1119 574 GSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQA 653 (1392)
Q Consensus 574 a~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~ 653 (1392)
++|++|++++++|++.|++|++++ ++++.+++.+ ++.+++++.+..++.+.+++.++++|+|+++|+.++.....
T Consensus 150 ~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~ 224 (325)
T cd08271 150 GAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVKS----LGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAA 224 (325)
T ss_pred CccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHHH----cCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHH
Confidence 999999999999999999999887 6788888854 45688999888888888999988889999999998877778
Q ss_pred HHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCH----HHHHHHHHHHHHHHHcCCCCCcceeee
Q psy1119 654 SVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQ----EWKMSLQKALQKAIDAGAVQPLVRTIF 729 (1392)
Q Consensus 654 s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~----~~~~~~~~~~~~~l~~g~l~pl~~~vf 729 (1392)
+++|++++|+++.+|...... ....+.+++.+..+.+.......+ ....+....+.+++.++.+.+.+.+.|
T Consensus 225 ~~~~l~~~G~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 300 (325)
T cd08271 225 LAPTLAFNGHLVCIQGRPDAS----PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVL 300 (325)
T ss_pred HHHhhccCCEEEEEcCCCCCc----chhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEE
Confidence 999999999999997543221 223355677777766544322221 233445566677888999988888899
Q ss_pred ccccHHHHHHHHHcCCccceEEEEe
Q psy1119 730 PEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 730 ~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+++++.+||+.+.++...||+|+++
T Consensus 301 ~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 301 PFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred cHHHHHHHHHHHHcCCccceEEEEC
Confidence 9999999999999999999998763
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-28 Score=290.42 Aligned_cols=288 Identities=15% Similarity=0.134 Sum_probs=211.7
Q ss_pred ceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------C
Q psy1119 436 LTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD--------S 507 (1392)
Q Consensus 436 l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~--------v 507 (1392)
+++.+.|.|. ++++||+|||.|+|||++|++.+.|.++... ....|.++|||++|+|++ +
T Consensus 13 l~~~~~p~p~--------~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~----~~~~p~i~G~e~~G~V~~vG~~~~~~v 80 (355)
T cd08230 13 VRVVDIPEPE--------PTPGEVLVRTLEVGVCGTDREIVAGEYGTAP----PGEDFLVLGHEALGVVEEVGDGSGLSP 80 (355)
T ss_pred CeEEeCCCCC--------CCCCeEEEEEEEEEeccccHHHHcCCCCCCC----CCCCCeeeccccceEEEEecCCCCCCC
Confidence 8899988875 6899999999999999999999999753210 012367999999999974 6
Q ss_pred CCeEEEee------------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHH
Q psy1119 508 GKRVMGLT------------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAM 557 (1392)
Q Consensus 508 GdrV~gl~------------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL 557 (1392)
||||++.. ..|+|++|+.++++.++++|++++ ++ |++..++++++.++
T Consensus 81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~-a~~~~p~~~~~~a~ 158 (355)
T cd08230 81 GDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DV-GVLLEPLSVVEKAI 158 (355)
T ss_pred CCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cc-eeecchHHHHHHHH
Confidence 78887531 238899999999999999999999 43 44445666655554
Q ss_pred HH------hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec---ChhhHHHHHHHCCCCCcCceeeCCCccHHH
Q psy1119 558 FI------CGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVG---TPEKREFIRKTFPFIKEENIGNSRDTSFEQ 628 (1392)
Q Consensus 558 ~~------~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~---s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~ 628 (1392)
.. ..++++|++|||+| +|++|++++|+|+++|++|+++++ +++|++++++ ++++++ ++++.++.+
T Consensus 159 ~~~~~~~~~~~~~~g~~vlI~G-~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~----~Ga~~v-~~~~~~~~~ 232 (355)
T cd08230 159 EQAEAVQKRLPTWNPRRALVLG-AGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEE----LGATYV-NSSKTPVAE 232 (355)
T ss_pred HHHhhhhhhcccCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH----cCCEEe-cCCccchhh
Confidence 32 22367899999996 599999999999999999999987 6788888875 677764 666666544
Q ss_pred HHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCcccc-----ccccCCCcEEEEEechhhhhhCH
Q psy1119 629 LVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLG-----MEVFMRETSFHGVMLDNFFFAEQ 702 (1392)
Q Consensus 629 ~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-----~~~~~k~~s~~g~~~~~~~~~~~ 702 (1392)
. +. +.++|+|||+++. ..+..++++++++|+++.+|.........+. ..++.+++++.|+.... .
T Consensus 233 -~-~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~-----~ 303 (355)
T cd08230 233 -V-KL--VGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNAN-----K 303 (355)
T ss_pred -h-hh--cCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCc-----h
Confidence 2 22 3589999999986 4688999999999999999975431111122 24566889998864322 1
Q ss_pred HHHHHHHHHHHHHH--HcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 703 EWKMSLQKALQKAI--DAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 703 ~~~~~~~~~~~~~l--~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+...+..+.+.+.. ..+.++++++++|+++|+.+||+.+.++. +|+||+|
T Consensus 304 ~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 304 RHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred hhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 12233333332221 02336778899999999999999887654 5998864
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >cd05278 FDH_like Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.5e-28 Score=286.44 Aligned_cols=289 Identities=21% Similarity=0.319 Sum_probs=235.5
Q ss_pred CceEEeCCCCcccccccCCC-CCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee-------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKD-NINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~-~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~------- 506 (1392)
.+.+.+.|.|. + .+++|+|+|.++|+|+.|+....|.++.. ..|.++|+|++|+|.+
T Consensus 11 ~~~~~~~~~p~--------~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-------~~~~~~g~e~~G~V~~vG~~v~~ 75 (347)
T cd05278 11 KIGLEEVPDPK--------IQGPHDAIVRVTATSICGSDLHIYRGGVPGA-------KHGMILGHEFVGEVVEVGSDVKR 75 (347)
T ss_pred ceEEEEcCCCC--------CCCCCeEEEEEEEEEechhhHHHHcCCCCCC-------CCCceeccceEEEEEEECCCccc
Confidence 46777877764 5 78999999999999999999998877542 1267899999999873
Q ss_pred --CCCeEEEe------------------------------ecCCcccceEEeccc--ceEEcCCCCCHhhHhhhhHHHHH
Q psy1119 507 --SGKRVMGL------------------------------TSGRSLANCCETDVE--MAWEIPDQWTLEDAATVPCVYAT 552 (1392)
Q Consensus 507 --vGdrV~gl------------------------------~~~g~~a~~v~~~~~--~~~~iPd~ls~e~AA~lp~~~~T 552 (1392)
+||+|.+. ...|+|++|+++++. .++++|+++++++||+++++++|
T Consensus 76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~t 155 (347)
T cd05278 76 LKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPT 155 (347)
T ss_pred cCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhh
Confidence 57888762 124789999999997 89999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHH
Q psy1119 553 AVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVM 631 (1392)
Q Consensus 553 A~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~ 631 (1392)
||+++ ..+++++|++|||+| +|++|++++|+|+.+|+ .|+++.+++++.+++++ ++.+++++.++.++.+.++
T Consensus 156 a~~~~-~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~i~ 229 (347)
T cd05278 156 GFHGA-ELAGIKPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKE----AGATDIINPKNGDIVEQIL 229 (347)
T ss_pred eeehh-hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH----hCCcEEEcCCcchHHHHHH
Confidence 99998 678999999999974 69999999999999997 78888888888877765 5678899988888989999
Q ss_pred HHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHH
Q psy1119 632 KRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQK 710 (1392)
Q Consensus 632 ~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~ 710 (1392)
+.++++++|++||+.++ +.+..++++|+++|+++.+|..............+.+++++.+..... ...++
T Consensus 230 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 300 (347)
T cd05278 230 ELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV---------RARMP 300 (347)
T ss_pred HHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCc---------hhHHH
Confidence 98888899999999987 688999999999999999985432211112233456788887754211 23445
Q ss_pred HHHHHHHcCCCCCc--ceeeeccccHHHHHHHHHcCCc-cceEEEE
Q psy1119 711 ALQKAIDAGAVQPL--VRTIFPEDKVEEAFRYMAAGKH-IGKVIIK 753 (1392)
Q Consensus 711 ~~~~~l~~g~l~pl--~~~vf~l~ev~eA~~~l~~g~~-~GKvVI~ 753 (1392)
.+.+++.+|.+++. +..+|+++++++||+.+..++. .+|+|++
T Consensus 301 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 301 ELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred HHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence 56677888988874 5688999999999999988877 7898875
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall |
| >cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-28 Score=290.65 Aligned_cols=290 Identities=19% Similarity=0.286 Sum_probs=235.7
Q ss_pred CCCceEEeCCCCcccccccCCC-CCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee-----
Q psy1119 433 MSSLTWEQGPVNMKTWKKYSKD-NINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD----- 506 (1392)
Q Consensus 433 l~~l~~~~~~~~~~~~~~~~~~-~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~----- 506 (1392)
++.+++.+.|.|. + .+++|+|+|.|+|+|++|+....|.++.. ..|.++|+|++|+|++
T Consensus 9 ~~~~~~~~~~~p~--------~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-------~~p~~~G~e~~G~V~~vG~~v 73 (386)
T cd08283 9 KGDVRVEEVPDPK--------IEDPTDAIVRVTATAICGSDLHLYHGYIPGM-------KKGDILGHEFMGVVEEVGPEV 73 (386)
T ss_pred CCCceEEeCCCCC--------CCCCCeEEEEEEEEecchhhhhhhcCCCCCC-------CCCccccccceEEEEEeCCCC
Confidence 4567888887765 4 58999999999999999999999987542 1367899999999873
Q ss_pred ----CCCeEEEee-----------------------------------------------cCCcccceEEeccc--ceEE
Q psy1119 507 ----SGKRVMGLT-----------------------------------------------SGRSLANCCETDVE--MAWE 533 (1392)
Q Consensus 507 ----vGdrV~gl~-----------------------------------------------~~g~~a~~v~~~~~--~~~~ 533 (1392)
+||+|+++. ..|+|++|+.+++. .+++
T Consensus 74 ~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~ 153 (386)
T cd08283 74 RNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFK 153 (386)
T ss_pred CCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEE
Confidence 688887642 13789999999988 8999
Q ss_pred cCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCC
Q psy1119 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPF 612 (1392)
Q Consensus 534 iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~ 612 (1392)
+|+++++++||+++++++|||+++ ..+++++|++|||| |+|++|++++|+|+++|+ +|+++++++++.+++++.+
T Consensus 154 lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~-g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~-- 229 (386)
T cd08283 154 IPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVW-GCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHL-- 229 (386)
T ss_pred CCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcC--
Confidence 999999999999999999999999 78899999999999 569999999999999998 5999999999999998732
Q ss_pred CCcCceeeCCCc-cHHHHHHHHcCCCcceEEEecCch----------------------hHHHHHHhcccCCeEEEEEcc
Q psy1119 613 IKEENIGNSRDT-SFEQLVMKRTKGRGVDLVLNSLAE----------------------EKLQASVRCLAQGGRFLEIGK 669 (1392)
Q Consensus 613 l~~~~i~~s~~~-~~~~~i~~~T~g~GvDvVlds~~~----------------------~~l~~s~~~La~~Gr~v~iG~ 669 (1392)
+. .+++.... ++.+.+++.++++++|+|||++++ ..+..++++++++|+++.+|.
T Consensus 230 -~~-~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~ 307 (386)
T cd08283 230 -GA-ETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGV 307 (386)
T ss_pred -Cc-EEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcC
Confidence 33 57777666 488999999988899999999864 357889999999999999986
Q ss_pred cccccCccccc-cccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCC-
Q psy1119 670 FDLANNNMLGM-EVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGK- 745 (1392)
Q Consensus 670 ~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~- 745 (1392)
.... .....+ ..+.+++++.+..... ...+..+.+++.+|.+.+ +..++|+++++.+||+.+.+++
T Consensus 308 ~~~~-~~~~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~ 377 (386)
T cd08283 308 YGGT-VNKFPIGAAMNKGLTLRMGQTHV---------QRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKED 377 (386)
T ss_pred CCCC-cCccCHHHHHhCCcEEEeccCCc---------hHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCC
Confidence 5432 122232 4567888888864211 223444556788898887 3568899999999999998887
Q ss_pred ccceEEEE
Q psy1119 746 HIGKVIIK 753 (1392)
Q Consensus 746 ~~GKvVI~ 753 (1392)
..+|+||+
T Consensus 378 ~~~k~~~~ 385 (386)
T cd08283 378 GCIKVVLK 385 (386)
T ss_pred CeEEEEec
Confidence 56899885
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T |
| >cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-28 Score=286.38 Aligned_cols=294 Identities=20% Similarity=0.251 Sum_probs=237.1
Q ss_pred ceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChh-h----hhhhccccccccceeeEEEEee----
Q psy1119 436 LTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPE-V----IESRRLYQHCVIGFEYSGRLRD---- 506 (1392)
Q Consensus 436 l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~-~----~~~~~~~~p~~lG~E~sGvV~~---- 506 (1392)
+++.+.|.|. +.++||+|+|.|+|+|+.|++.+.|.++.. . +.......|.++|+|++|+|.+
T Consensus 13 ~~~~~~~~p~--------~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~ 84 (350)
T cd08240 13 LEEVEIDTPK--------PPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVGPD 84 (350)
T ss_pred ceEEecCCCC--------CCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEeeCCC
Confidence 6788887765 688999999999999999999998865420 0 0000112256899999999873
Q ss_pred -----CCCeEEEee---------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHH
Q psy1119 507 -----SGKRVMGLT---------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAV 554 (1392)
Q Consensus 507 -----vGdrV~gl~---------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~ 554 (1392)
+||+|+++. ..|++++|+.++...++++|+++++++|++++++++|||
T Consensus 85 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~ 164 (350)
T cd08240 85 AADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAY 164 (350)
T ss_pred CCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHH
Confidence 678888751 347899999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHH
Q psy1119 555 YAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKR 633 (1392)
Q Consensus 555 ~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~ 633 (1392)
+++.....+++|++|||| |+|++|++++|+|+.+|+ +|+++..+++|++++.+ ++.+.+++.++.++.+.+.+.
T Consensus 165 ~~~~~~~~~~~~~~vlI~-g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~ 239 (350)
T cd08240 165 SAVKKLMPLVADEPVVII-GAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA----AGADVVVNGSDPDAAKRIIKA 239 (350)
T ss_pred HHHHhcccCCCCCEEEEE-CCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH----hCCcEEecCCCccHHHHHHHH
Confidence 999888777899999999 579999999999999999 68888889999999865 456788898888888888888
Q ss_pred cCCCcceEEEecCc-hhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHH
Q psy1119 634 TKGRGVDLVLNSLA-EEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKAL 712 (1392)
Q Consensus 634 T~g~GvDvVlds~~-~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~ 712 (1392)
+++ ++|+|||+.+ ...+..++++|+++|+++.+|..+........+..+ +++++.+..... . +....+
T Consensus 240 ~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~i~~~~~~~-----~----~~~~~~ 308 (350)
T cd08240 240 AGG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPL-RALTIQGSYVGS-----L----EELREL 308 (350)
T ss_pred hCC-CCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhh-cCcEEEEcccCC-----H----HHHHHH
Confidence 777 8999999997 467899999999999999998654322222222233 778887765432 1 223445
Q ss_pred HHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 713 QKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 713 ~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
.+++++|.+++.+..+|+++++++||+.+.+++..||+|+.
T Consensus 309 ~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 309 VALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred HHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 56788899988888899999999999999999999999874
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy |
| >cd05195 enoyl_red enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-27 Score=274.11 Aligned_cols=284 Identities=44% Similarity=0.683 Sum_probs=242.0
Q ss_pred CeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---------eCCCeEEEeecCCcccceEEec
Q psy1119 457 NHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR---------DSGKRVMGLTSGRSLANCCETD 527 (1392)
Q Consensus 457 ~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~---------~vGdrV~gl~~~g~~a~~v~~~ 527 (1392)
++++|+|.++|+|+.|++.+.|.++. .|.++|+|++|+|. ++||+|+++. .|+|++|+.++
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~~---------~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-~g~~~~~~~~~ 70 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLPG---------DETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-PGAFATHVRVD 70 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCCC---------CCCccceeeeEEEEeecCCccCCCCCCEEEEEe-cCcccceEEec
Confidence 47999999999999999999886532 26789999999986 3678888875 47999999999
Q ss_pred ccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH
Q psy1119 528 VEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIR 607 (1392)
Q Consensus 528 ~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~ 607 (1392)
...++++|+++++.+++.+++++.|+|+++...+++++|++|+|+|++|++|++++|+|+.+|++|+++++++++.++++
T Consensus 71 ~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 150 (293)
T cd05195 71 ARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR 150 (293)
T ss_pred hhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999988899999999999999999999999999999999999999999999998
Q ss_pred HHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCc
Q psy1119 608 KTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRET 687 (1392)
Q Consensus 608 ~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~ 687 (1392)
+.++ .++++++..+.++.+.+++.++++++|+++|+.++..+..++++++++|+++.+|..+...........+.+++
T Consensus 151 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~ 228 (293)
T cd05195 151 ELGG--PVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRPFLRNV 228 (293)
T ss_pred HhCC--CcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccchhhhccCC
Confidence 7432 26788888888898999999988999999999998888999999999999999987654322234445567788
Q ss_pred EEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEE
Q psy1119 688 SFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 688 s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI 752 (1392)
++.++.+..+....+.........+.+++.++.+++.....|+++++.+||..+..++..||+|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 229 SFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred eEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 99988776654444444455666677888899999888888999999999999999988888764
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-27 Score=279.69 Aligned_cols=297 Identities=23% Similarity=0.392 Sum_probs=248.2
Q ss_pred cCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---
Q psy1119 429 VRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR--- 505 (1392)
Q Consensus 429 ~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~--- 505 (1392)
.+|.+..+.|.+.+.|. +.+++|+|+|.++|+|+.|+++..|..+.. ...|.++|||++|+|.
T Consensus 8 ~~~~~~~~~~~~~~~~~--------~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~------~~~~~~~g~e~~G~v~~~G 73 (342)
T cd08266 8 GHGGPEVLEYGDLPEPE--------PGPDEVLVRVKAAALNHLDLWVRRGMPGIK------LPLPHILGSDGAGVVEAVG 73 (342)
T ss_pred cCCCccceeEeecCCCC--------CCCCeEEEEEEeeecCHHHHHHhcCCCCCC------CCCCeecccceEEEEEEeC
Confidence 45667788888877753 689999999999999999999998865421 1236789999999987
Q ss_pred ------eCCCeEEEee---------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHH
Q psy1119 506 ------DSGKRVMGLT---------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYAT 552 (1392)
Q Consensus 506 ------~vGdrV~gl~---------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~T 552 (1392)
++||+|+++. ..|++++|+.++...++++|+++++++|++++++++|
T Consensus 74 ~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~ 153 (342)
T cd08266 74 PGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLT 153 (342)
T ss_pred CCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHH
Confidence 3688888751 2478999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHH
Q psy1119 553 AVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMK 632 (1392)
Q Consensus 553 A~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~ 632 (1392)
||+++...+++.+|++|+|+|+++++|+++++++++.|++|++++.++++++++++ ++.+.+++..+.++.+.+.+
T Consensus 154 a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 229 (342)
T cd08266 154 AWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE----LGADYVIDYRKEDFVREVRE 229 (342)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCCeEEecCChHHHHHHHH
Confidence 99999888999999999999999999999999999999999999999998888865 45577888888888888888
Q ss_pred HcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhhhhhCHHHHHHHHHH
Q psy1119 633 RTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFFAEQEWKMSLQKA 711 (1392)
Q Consensus 633 ~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~ 711 (1392)
.+.++++|+++|+.+++.+...+++++++|+++.+|...... ..+.+ ..+.+++++.+...... ..+..
T Consensus 230 ~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 299 (342)
T cd08266 230 LTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYE-APIDLRHVFWRQLSILGSTMGTK---------AELDE 299 (342)
T ss_pred HhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCC-CCcCHHHHhhcceEEEEEecCCH---------HHHHH
Confidence 888889999999999888999999999999999998654321 22333 45778888888764331 23344
Q ss_pred HHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 712 LQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 712 ~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
+.+++.+|.+++++.+.|+++++++||+++.++++.||+|++
T Consensus 300 ~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 341 (342)
T cd08266 300 ALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLT 341 (342)
T ss_pred HHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEe
Confidence 556788898988888999999999999999999999999875
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >PRK10083 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=283.49 Aligned_cols=288 Identities=16% Similarity=0.221 Sum_probs=225.5
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-------- 505 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-------- 505 (1392)
..+.|.+.|.|. +.+++++|||.++|+|+.|++...|.++.. ..|.++|||++|+|+
T Consensus 10 ~~~~~~~~~~p~--------~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~-------~~p~i~G~e~~G~V~~vG~~v~~ 74 (339)
T PRK10083 10 NSLAIEERPIPQ--------PAAGEVRVKVKLAGICGSDSHIYRGHNPFA-------KYPRVIGHEFFGVIDAVGEGVDA 74 (339)
T ss_pred CeeEEEeccCCC--------CCCCeEEEEEEEEEEcccchHHHcCCCCcC-------CCCcccccceEEEEEEECCCCcc
Confidence 368888888875 688999999999999999999998876432 136799999999987
Q ss_pred -eCCCeEE---------------------------EeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHH
Q psy1119 506 -DSGKRVM---------------------------GLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAM 557 (1392)
Q Consensus 506 -~vGdrV~---------------------------gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL 557 (1392)
++||+|+ ++...|+|++|+.++...++++|+++++++|+ +..+++++|+ +
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~-~ 152 (339)
T PRK10083 75 ARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAAN-V 152 (339)
T ss_pred CCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHH-H
Confidence 3688887 44445899999999999999999999999877 5568888885 4
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHH-cCCE-EEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcC
Q psy1119 558 FICGQMQKGESILIHAGSGGVGQAAINLARY-MDAE-IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTK 635 (1392)
Q Consensus 558 ~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~-~Ga~-V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~ 635 (1392)
...+++++|++|+||| +|++|++++|+|+. +|++ ++++.++++|.+.+++ +++++++++++.++.+.+.. .
T Consensus 153 ~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~----~Ga~~~i~~~~~~~~~~~~~--~ 225 (339)
T PRK10083 153 TGRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKE----SGADWVINNAQEPLGEALEE--K 225 (339)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHH----hCCcEEecCccccHHHHHhc--C
Confidence 5778999999999998 69999999999996 6997 5566677888887765 67899999887777777643 2
Q ss_pred CCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHH
Q psy1119 636 GRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQK 714 (1392)
Q Consensus 636 g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~ 714 (1392)
+.++|+|||+.++ ..+..++++++++|+++.+|..+. ...........+++++.+.... ......+.+
T Consensus 226 g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 294 (339)
T PRK10083 226 GIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE-PSEIVQQGITGKELSIFSSRLN----------ANKFPVVID 294 (339)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CceecHHHHhhcceEEEEEecC----------hhhHHHHHH
Confidence 4457899999984 678999999999999999996542 1111111223466776664321 122344567
Q ss_pred HHHcCCCCC--cceeeeccccHHHHHHHHHcCC-ccceEEEEecC
Q psy1119 715 AIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGK-HIGKVIIKIRD 756 (1392)
Q Consensus 715 ~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~-~~GKvVI~~~~ 756 (1392)
++.+|.+++ ++.++|+++++++||+.+.+++ ..+|+|+++++
T Consensus 295 ~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 295 WLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred HHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 788999988 4789999999999999998654 67999998753
|
|
| >cd08252 AL_MDR Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-27 Score=280.52 Aligned_cols=301 Identities=20% Similarity=0.262 Sum_probs=242.7
Q ss_pred ccCCCCC---CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 428 LVRGDMS---SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 428 ~~~G~l~---~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
..+|++. .+.+.+.|.|. +.+++++|++.++|+|+.|++...|..+.. ..+.++|+|++|+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-------~~~~~~g~e~~G~v 71 (336)
T cd08252 7 TQPLPITDPDSLIDIELPKPV--------PGGRDLLVRVEAVSVNPVDTKVRAGGAPVP-------GQPKILGWDASGVV 71 (336)
T ss_pred cCCCCCCcccceeEccCCCCC--------CCCCEEEEEEEEEEcCHHHHHHHcCCCCCC-------CCCcccccceEEEE
Confidence 3456554 57777777765 588999999999999999999988865411 12558999999998
Q ss_pred ee---------CCCeEEEee---cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCC-----CC
Q psy1119 505 RD---------SGKRVMGLT---SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQK-----GE 567 (1392)
Q Consensus 505 ~~---------vGdrV~gl~---~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~-----Ge 567 (1392)
.+ +||+|+++. ..|+|++|+.++...++++|+++++++++.+++++.|||+++...+++++ |+
T Consensus 72 ~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~ 151 (336)
T cd08252 72 EAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGK 151 (336)
T ss_pred EEcCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCC
Confidence 73 578888764 35899999999999999999999999999999999999999988888888 99
Q ss_pred EEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecC
Q psy1119 568 SILIHAGSGGVGQAAINLARYMD-AEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSL 646 (1392)
Q Consensus 568 tVLI~ga~GgVG~aaIqlA~~~G-a~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~ 646 (1392)
+|+|||++|++|++++|+|+.+| ++|+++++++++++++++ ++.+++++.+. ++.+.++.. .++++|+++|++
T Consensus 152 ~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~-~~~~~i~~~-~~~~~d~vl~~~ 225 (336)
T cd08252 152 TLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKE----LGADHVINHHQ-DLAEQLEAL-GIEPVDYIFCLT 225 (336)
T ss_pred EEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCcEEEeCCc-cHHHHHHhh-CCCCCCEEEEcc
Confidence 99999999999999999999999 999999999999999965 56788998775 677777754 446899999999
Q ss_pred ch-hHHHHHHhcccCCeEEEEEcccccccCcccccccc-CCCcEEEEEechhh-hhh--CHHHHHHHHHHHHHHHHcCCC
Q psy1119 647 AE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVF-MRETSFHGVMLDNF-FFA--EQEWKMSLQKALQKAIDAGAV 721 (1392)
Q Consensus 647 ~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~-~k~~s~~g~~~~~~-~~~--~~~~~~~~~~~~~~~l~~g~l 721 (1392)
++ ..+..++++++++|+++.+|... ..+.+..+ .+++++.+..+... ... .+......++.+.+++.+|.+
T Consensus 226 ~~~~~~~~~~~~l~~~g~~v~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 301 (336)
T cd08252 226 DTDQHWDAMAELIAPQGHICLIVDPQ----EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKL 301 (336)
T ss_pred CcHHHHHHHHHHhcCCCEEEEecCCC----CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCE
Confidence 84 68899999999999999998642 22333344 67888888654321 111 122334566667788999998
Q ss_pred CCcce---eeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 722 QPLVR---TIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 722 ~pl~~---~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
++.+. ..|+++++.+||+.+.++++.||+|++
T Consensus 302 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 302 KTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred ecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 87643 347999999999999999999998864
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil |
| >cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=282.76 Aligned_cols=288 Identities=22% Similarity=0.248 Sum_probs=238.1
Q ss_pred ceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---------e
Q psy1119 436 LTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR---------D 506 (1392)
Q Consensus 436 l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~---------~ 506 (1392)
+.+.+.|.|. +.+++|+|++.++++|+.|+....|.++.. ..|.++|+|++|+|+ +
T Consensus 13 ~~~~~~~~~~--------~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-------~~~~~~g~e~~G~V~~~G~~~~~~~ 77 (345)
T cd08260 13 LEIREVPDPE--------PPPDGVVVEVEACGVCRSDWHGWQGHDPDV-------TLPHVPGHEFAGVVVEVGEDVSRWR 77 (345)
T ss_pred cEEEEccCCC--------CCCCeEEEEEEEeeccHHHHHHhcCCCCCC-------CCCeeeccceeEEEEEECCCCccCC
Confidence 7777777664 688999999999999999999998876532 236789999999986 3
Q ss_pred CCCeEEE---------------------------eecCCcccceEEeccc--ceEEcCCCCCHhhHhhhhHHHHHHHHHH
Q psy1119 507 SGKRVMG---------------------------LTSGRSLANCCETDVE--MAWEIPDQWTLEDAATVPCVYATAVYAM 557 (1392)
Q Consensus 507 vGdrV~g---------------------------l~~~g~~a~~v~~~~~--~~~~iPd~ls~e~AA~lp~~~~TA~~aL 557 (1392)
+||+|++ +...|+|++|+.+++. .++++|+++++++||+++++++|||+++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l 157 (345)
T cd08260 78 VGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRAL 157 (345)
T ss_pred CCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHH
Confidence 6889976 4346899999999985 8999999999999999999999999999
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCC-ccHHHHHHHHcCC
Q psy1119 558 FICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRD-TSFEQLVMKRTKG 636 (1392)
Q Consensus 558 ~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~-~~~~~~i~~~T~g 636 (1392)
...+++.+|++|+||| +|++|++++|+|+.+|++|++++.++++++++++ ++.+++++.+. .++.+.+++.+.+
T Consensus 158 ~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~ 232 (345)
T cd08260 158 VHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARE----LGAVATVNASEVEDVAAAVRDLTGG 232 (345)
T ss_pred HHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH----hCCCEEEccccchhHHHHHHHHhCC
Confidence 8889999999999998 7999999999999999999999999999999965 46789999888 7888889888887
Q ss_pred CcceEEEecCc-hhHHHHHHhcccCCeEEEEEcccccccC-cccccccc-CCCcEEEEEechhhhhhCHHHHHHHHHHHH
Q psy1119 637 RGVDLVLNSLA-EEKLQASVRCLAQGGRFLEIGKFDLANN-NMLGMEVF-MRETSFHGVMLDNFFFAEQEWKMSLQKALQ 713 (1392)
Q Consensus 637 ~GvDvVlds~~-~~~l~~s~~~La~~Gr~v~iG~~~~~~~-~~l~~~~~-~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~ 713 (1392)
++|++||+.+ +..+..++++++++|+++.+|..+.... ..+.+..+ .+++++.+..... ....+.+.
T Consensus 233 -~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 302 (345)
T cd08260 233 -GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMP---------AHRYDAML 302 (345)
T ss_pred -CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCC---------HHHHHHHH
Confidence 8999999997 4678899999999999999996543321 22233323 6777887764321 12334455
Q ss_pred HHHHcCCCCCc--ceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 714 KAIDAGAVQPL--VRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 714 ~~l~~g~l~pl--~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
+++++|.+.+. +.+.|+++++++||+.+++++..||+|++
T Consensus 303 ~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 303 ALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred HHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 67888888764 57889999999999999999999998864
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty |
| >TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-28 Score=281.10 Aligned_cols=276 Identities=17% Similarity=0.175 Sum_probs=208.4
Q ss_pred CCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecC-hhhHHHhcCCCChhhhhhhccccccccceeeEEEEee-----
Q psy1119 433 MSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSIN-FRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD----- 506 (1392)
Q Consensus 433 l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln-~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~----- 506 (1392)
++.+++.+.|.|. ++++||+|||.|+||| .+|++.+.|.++... ....|.++|||++|+|++
T Consensus 10 ~~~l~~~e~~~p~--------~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~----~~~~P~i~GhE~~G~V~~vG~~v 77 (308)
T TIGR01202 10 PNQIELREVTLTP--------PSPGDLVVEIWYSGISTGTEKLFWNGLMPPFP----GMGYPLVPGYESVGRVVEAGPDT 77 (308)
T ss_pred CCeEEEEEecCCC--------CCCCeEEEEEEEEeeccCchhHHhcCCCCCCC----CCCCCccCcceeEEEEEEecCCC
Confidence 4468888888875 6899999999999997 699999988764320 012478999999999974
Q ss_pred ---CCCeEEEee---------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcC
Q psy1119 507 ---SGKRVMGLT---------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAG 574 (1392)
Q Consensus 507 ---vGdrV~gl~---------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga 574 (1392)
+||||+... ..|+|++|+.++++.++++|++++++. |.++ +++|||+++.. + ..+|++|||+|
T Consensus 78 ~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G- 152 (308)
T TIGR01202 78 GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVG- 152 (308)
T ss_pred CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEEC-
Confidence 688997532 148999999999999999999999865 5555 57899999854 3 34699999995
Q ss_pred CchHHHHHHHHHHHcCCEEE-EEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchh-HHH
Q psy1119 575 SGGVGQAAINLARYMDAEIF-TTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEE-KLQ 652 (1392)
Q Consensus 575 ~GgVG~aaIqlA~~~Ga~V~-~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~-~l~ 652 (1392)
+|+||++++|+|+++|++++ ++..++++++.+.+ .+++|..+. .+.|+|+|||++++. .++
T Consensus 153 ~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~-------~~~i~~~~~----------~~~g~Dvvid~~G~~~~~~ 215 (308)
T TIGR01202 153 HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG-------YEVLDPEKD----------PRRDYRAIYDASGDPSLID 215 (308)
T ss_pred CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh-------ccccChhhc----------cCCCCCEEEECCCCHHHHH
Confidence 69999999999999999855 44445555544432 345554321 246899999999975 679
Q ss_pred HHHhcccCCeEEEEEcccccccCcccc-ccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeee
Q psy1119 653 ASVRCLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIF 729 (1392)
Q Consensus 653 ~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf 729 (1392)
.++++++++|+++.+|..... ..+. ...+.+++++.+..... . ..+..+.+++++|.+++ +++++|
T Consensus 216 ~~~~~l~~~G~iv~~G~~~~~--~~~~~~~~~~~~~~i~~~~~~~-----~----~~~~~~~~l~~~g~i~~~~~it~~~ 284 (308)
T TIGR01202 216 TLVRRLAKGGEIVLAGFYTEP--VNFDFVPAFMKEARLRIAAEWQ-----P----GDLHAVRELIESGALSLDGLITHQR 284 (308)
T ss_pred HHHHhhhcCcEEEEEeecCCC--cccccchhhhcceEEEEecccc-----h----hHHHHHHHHHHcCCCChhhccceee
Confidence 999999999999999965321 1122 23456778888754321 1 22445667888999876 688999
Q ss_pred ccccHHHHHHHHHcCCccceEEEE
Q psy1119 730 PEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 730 ~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
|++|+.+||+.+.++...+|++|+
T Consensus 285 ~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 285 PASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred cHHHHHHHHHHHhcCcCceEEEeC
Confidence 999999999988877778999874
|
|
| >PRK13771 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=282.18 Aligned_cols=290 Identities=21% Similarity=0.384 Sum_probs=236.1
Q ss_pred eccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-
Q psy1119 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR- 505 (1392)
Q Consensus 427 ~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~- 505 (1392)
...+|. .+++.+.|.|. +.+++++|+|.++|+|+.|++...|.++.. ..|.++|+|++|+|+
T Consensus 6 ~~~~~~--~~~~~~~~~~~--------~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~-------~~~~~~g~e~~G~v~~ 68 (334)
T PRK13771 6 LPGFKQ--GYRIEEVPDPK--------PGKDEVVIKVNYAGLCYRDLLQLQGFYPRM-------KYPVILGHEVVGTVEE 68 (334)
T ss_pred EcCCCC--CcEEEeCCCCC--------CCCCeEEEEEEEEeechhhHHHhcCCCCCC-------CCCeeccccceEEEEE
Confidence 344553 57888888765 689999999999999999999998876432 125689999999986
Q ss_pred --------eCCCeEEEee---------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHH
Q psy1119 506 --------DSGKRVMGLT---------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVY 550 (1392)
Q Consensus 506 --------~vGdrV~gl~---------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~ 550 (1392)
++|++|+++. ..|+|++|+.++...++++|++++++++|.+++++
T Consensus 69 ~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~ 148 (334)
T PRK13771 69 VGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVT 148 (334)
T ss_pred eCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchH
Confidence 3688998863 14789999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHH
Q psy1119 551 ATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLV 630 (1392)
Q Consensus 551 ~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i 630 (1392)
+|||+++... ++++|++|+|||++|++|++++|+|+.+|++|+++++++++++++++ + ++++++.+ ++.+.+
T Consensus 149 ~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~----~-~~~~~~~~--~~~~~v 220 (334)
T PRK13771 149 GMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSK----Y-ADYVIVGS--KFSEEV 220 (334)
T ss_pred HHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----H-HHHhcCch--hHHHHH
Confidence 9999999766 89999999999999999999999999999999999999999998865 4 56777665 566777
Q ss_pred HHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccC--ccccccccCCCcEEEEEechhhhhhCHHHHHHH
Q psy1119 631 MKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANN--NMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSL 708 (1392)
Q Consensus 631 ~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~--~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~ 708 (1392)
++. + ++|++||+.++..+..++++++++|+++.+|..+.... ..+.+ .+.+++++.+.... .. ..
T Consensus 221 ~~~--~-~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~----~~ 287 (334)
T PRK13771 221 KKI--G-GADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGY-IILKDIEIIGHISA-----TK----RD 287 (334)
T ss_pred Hhc--C-CCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHH-HHhcccEEEEecCC-----CH----HH
Confidence 664 3 79999999998888999999999999999997532211 11222 25678888776211 11 23
Q ss_pred HHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 709 QKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 709 ~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
.+.+.+++++|.+++.+.++|+++++++||+.+.++...||+|+++
T Consensus 288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 288 VEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 4455577888999888889999999999999999998999998764
|
|
| >cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-27 Score=282.74 Aligned_cols=291 Identities=21% Similarity=0.272 Sum_probs=229.4
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhh--hhccccccccceeeEEEEee------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIE--SRRLYQHCVIGFEYSGRLRD------ 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~--~~~~~~p~~lG~E~sGvV~~------ 506 (1392)
.+.+.+.|.|. +.+++|+|+|.++|+|+.|++...|........ ......|.++|+|++|+|++
T Consensus 11 ~~~~~~~~~p~--------~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 82 (350)
T cd08256 11 DYRLEEVPVPR--------PGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEGAE 82 (350)
T ss_pred ceEEEECCCCC--------CCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCCcc
Confidence 47888888775 689999999999999999999988863110000 00012366899999999874
Q ss_pred -----CCCeEEE---------------------------ee--cCCcccceEEeccc-ceEEcCCCCCHhhHhhhhHHHH
Q psy1119 507 -----SGKRVMG---------------------------LT--SGRSLANCCETDVE-MAWEIPDQWTLEDAATVPCVYA 551 (1392)
Q Consensus 507 -----vGdrV~g---------------------------l~--~~g~~a~~v~~~~~-~~~~iPd~ls~e~AA~lp~~~~ 551 (1392)
+||+|++ +. ..|+|++|+.++++ .++++|+++++++||++ .+++
T Consensus 83 ~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ 161 (350)
T cd08256 83 ERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-EPLA 161 (350)
T ss_pred cCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhh-hHHH
Confidence 4778876 31 35899999999988 68999999999999998 8999
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHH
Q psy1119 552 TAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLV 630 (1392)
Q Consensus 552 TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i 630 (1392)
|+|+++ ..+++++|++|+| +|+|++|++++|+|+++|+. ++++.++++|.+++.+ ++.+++++.+..++.+.+
T Consensus 162 ta~~a~-~~~~~~~g~~vlI-~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~ 235 (350)
T cd08256 162 CALHAV-DRANIKFDDVVVL-AGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK----FGADVVLNPPEVDVVEKI 235 (350)
T ss_pred HHHHHH-HhcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH----cCCcEEecCCCcCHHHHH
Confidence 999998 7889999999999 56799999999999999987 5566677777776654 567889998888899999
Q ss_pred HHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccccc--cCCCcEEEEEechhhhhhCHHHHHH
Q psy1119 631 MKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEV--FMRETSFHGVMLDNFFFAEQEWKMS 707 (1392)
Q Consensus 631 ~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~--~~k~~s~~g~~~~~~~~~~~~~~~~ 707 (1392)
.+.++++|+|++||++++ ..+..++++++++|+++.+|..... ..+.+.. ..+++++.+..... .
T Consensus 236 ~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~i~~~~~~~----------~ 303 (350)
T cd08256 236 KELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDP--VTVDWSIIGDRKELDVLGSHLGP----------Y 303 (350)
T ss_pred HHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCC--CccChhHhhcccccEEEEeccCc----------h
Confidence 999998999999999985 5788899999999999999864321 1122222 35667777764322 1
Q ss_pred HHHHHHHHHHcCCCCCc--ceeeeccccHHHHHHHHHcCCccceEEE
Q psy1119 708 LQKALQKAIDAGAVQPL--VRTIFPEDKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 708 ~~~~~~~~l~~g~l~pl--~~~vf~l~ev~eA~~~l~~g~~~GKvVI 752 (1392)
....+.+++.+|.+++. +.++|+++++.+||+.+++++..||+|+
T Consensus 304 ~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 304 CYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred hHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 23445567888989873 6899999999999999999998999874
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-27 Score=280.00 Aligned_cols=300 Identities=15% Similarity=0.193 Sum_probs=241.5
Q ss_pred CCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee---
Q psy1119 430 RGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD--- 506 (1392)
Q Consensus 430 ~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~--- 506 (1392)
++.+..+.|.+.|.|. +.+++|+|||.++|+|+.|.....+..... .+ ...+.++|+|++|+|++
T Consensus 14 ~~~~~~~~~~~~~~p~--------~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~-~~---~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 14 PPPPDDFELVEVPLPE--------LKDGEVLVRTLYLSVDPYMRGWMSDAKSYS-PP---VQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred CCCccceeEEeccCCC--------CCCCeEEEEEEEEecCHHHhhhhccCcccC-CC---ccCCCcccCceEEEEEecCC
Confidence 3567789999988775 689999999999999998765554431100 00 01134789999999873
Q ss_pred ----CCCeEEEeecCCcccceEEecc-cceEEcCCCCC--HhhHhh-hhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Q psy1119 507 ----SGKRVMGLTSGRSLANCCETDV-EMAWEIPDQWT--LEDAAT-VPCVYATAVYAMFICGQMQKGESILIHAGSGGV 578 (1392)
Q Consensus 507 ----vGdrV~gl~~~g~~a~~v~~~~-~~~~~iPd~ls--~e~AA~-lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgV 578 (1392)
+||+|+++ ++|++|+.++. ..++++|++++ ++++++ +++++.|||+++...+++.+|++|||+|++|++
T Consensus 82 ~~~~~Gd~V~~~---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~i 158 (329)
T cd05288 82 PDFKVGDLVSGF---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAV 158 (329)
T ss_pred CCCCCCCEEecc---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchH
Confidence 68899876 47999999999 99999999995 656655 899999999999888899999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcc
Q psy1119 579 GQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCL 658 (1392)
Q Consensus 579 G~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~L 658 (1392)
|++++|+|+..|++|+++++++++++++++. ++.+++++.++.++.+.+++.++ +++|+++|++++..+..+++++
T Consensus 159 g~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~v~~~~~-~~~d~vi~~~g~~~~~~~~~~l 234 (329)
T cd05288 159 GSVVGQIAKLLGARVVGIAGSDEKCRWLVEE---LGFDAAINYKTPDLAEALKEAAP-DGIDVYFDNVGGEILDAALTLL 234 (329)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHHHHHhh---cCCceEEecCChhHHHHHHHhcc-CCceEEEEcchHHHHHHHHHhc
Confidence 9999999999999999999999999998763 46688999888888888888885 7899999999988899999999
Q ss_pred cCCeEEEEEcccccccCcc-----ccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeecccc
Q psy1119 659 AQGGRFLEIGKFDLANNNM-----LGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDK 733 (1392)
Q Consensus 659 a~~Gr~v~iG~~~~~~~~~-----l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~e 733 (1392)
+++|+++.+|..+...... .....+.+++++.++.+.... ......+..+.+++.+|.+++.+..+|++++
T Consensus 235 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~ 310 (329)
T cd05288 235 NKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYA----DRFPEALAELAKWLAEGKLKYREDVVEGLEN 310 (329)
T ss_pred CCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhH----HHHHHHHHHHHHHHHCCCccccccccccHHH
Confidence 9999999998654322211 123456788898887654321 1223455566678899999887777899999
Q ss_pred HHHHHHHHHcCCccceEEE
Q psy1119 734 VEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 734 v~eA~~~l~~g~~~GKvVI 752 (1392)
+.+||+.+.+++..||+|+
T Consensus 311 ~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 311 APEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHHHHHHHhcCCCccceeC
Confidence 9999999999988899874
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-27 Score=285.09 Aligned_cols=290 Identities=23% Similarity=0.321 Sum_probs=235.5
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR--------- 505 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~--------- 505 (1392)
.+.+.+.|.|. +.+++|+|+|.++|+|+.|+....|.++.. .|.++|+|++|+|+
T Consensus 12 ~~~~~~~~~p~--------~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--------~~~~~g~e~~G~V~~vG~~v~~~ 75 (363)
T cd08279 12 PLEIEEVELDD--------PGPGEVLVRIAAAGLCHSDLHVVTGDLPAP--------LPAVLGHEGAGVVEEVGPGVTGV 75 (363)
T ss_pred CceEEEeeCCC--------CCCCeEEEEEEEeecCcHHHHHhcCCCCCC--------CCccccccceEEEEEeCCCcccc
Confidence 47788887765 688999999999999999999998876521 25689999999987
Q ss_pred eCCCeEEEe-----------------------------------------------ecCCcccceEEecccceEEcCCCC
Q psy1119 506 DSGKRVMGL-----------------------------------------------TSGRSLANCCETDVEMAWEIPDQW 538 (1392)
Q Consensus 506 ~vGdrV~gl-----------------------------------------------~~~g~~a~~v~~~~~~~~~iPd~l 538 (1392)
++||+|+++ ...|+|++|+.++++.++++|+++
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~ 155 (363)
T cd08279 76 KPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDI 155 (363)
T ss_pred CCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCC
Confidence 368899873 134889999999999999999999
Q ss_pred CHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCCCcCc
Q psy1119 539 TLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIKEEN 617 (1392)
Q Consensus 539 s~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~~~~ 617 (1392)
++++++++++++.|||+++...+++++|++|||| |+|++|++++++|+.+|++ |++++++++|++++++ ++.++
T Consensus 156 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~-g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~----~g~~~ 230 (363)
T cd08279 156 PLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVI-GCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARR----FGATH 230 (363)
T ss_pred ChHHeehhcchhHHHHHHHHhccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH----hCCeE
Confidence 9999999999999999999888999999999999 5699999999999999996 9999999999998864 56689
Q ss_pred eeeCCCccHHHHHHHHcCCCcceEEEecCc-hhHHHHHHhcccCCeEEEEEcccccccC-ccccccccCCCcEEEEEech
Q psy1119 618 IGNSRDTSFEQLVMKRTKGRGVDLVLNSLA-EEKLQASVRCLAQGGRFLEIGKFDLANN-NMLGMEVFMRETSFHGVMLD 695 (1392)
Q Consensus 618 i~~s~~~~~~~~i~~~T~g~GvDvVlds~~-~~~l~~s~~~La~~Gr~v~iG~~~~~~~-~~l~~~~~~k~~s~~g~~~~ 695 (1392)
+++++..++.+.+.+.+.++++|++||+++ +..+..++++++++|+++.+|..+.... ......+..++.++.+..+.
T Consensus 231 vv~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (363)
T cd08279 231 TVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYG 310 (363)
T ss_pred EeCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEec
Confidence 999988889889998888889999999998 5678899999999999999986542111 11112233456666665432
Q ss_pred hhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEE
Q psy1119 696 NFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVI 751 (1392)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvV 751 (1392)
.. .....++.+.+++.+|.+++ .+.++|+++++.+||+.+.+++..+.|+
T Consensus 311 ~~------~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 311 SA------NPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred Cc------CcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 11 01234455567788898887 3678899999999999999888776554
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me |
| >cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-27 Score=276.46 Aligned_cols=302 Identities=17% Similarity=0.197 Sum_probs=239.2
Q ss_pred eccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-
Q psy1119 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR- 505 (1392)
Q Consensus 427 ~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~- 505 (1392)
...+|+++.+++++.|.|. +++++|+|+|.++|+|+.|+....|.++.. ...|.++|+|++|+|.
T Consensus 6 ~~~~~~~~~~~~~~~~~p~--------~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~------~~~~~~~g~e~~G~V~~ 71 (324)
T cd08288 6 LEKDDGGTSAELRELDESD--------LPEGDVTVEVHYSTLNYKDGLAITGKGGIV------RTFPLVPGIDLAGTVVE 71 (324)
T ss_pred EeccCCCcceEEEECCCCC--------CCCCeEEEEEEEEecCHHHHHHhcCCcccc------CCCCCccccceEEEEEe
Confidence 3457777789999988875 689999999999999999999988865321 0125578999999987
Q ss_pred ------eCCCeEEEee------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHH--HhcCCC-CCCEEE
Q psy1119 506 ------DSGKRVMGLT------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMF--ICGQMQ-KGESIL 570 (1392)
Q Consensus 506 ------~vGdrV~gl~------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~--~~a~l~-~GetVL 570 (1392)
++||+|+++. ..|++++|+.++...++++|++++++++++++++++||++++. ...+.. +|++||
T Consensus 72 ~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vl 151 (324)
T cd08288 72 SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVL 151 (324)
T ss_pred CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEE
Confidence 3799999863 2588999999999999999999999999999999999998764 123455 678999
Q ss_pred EEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhH
Q psy1119 571 IHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEK 650 (1392)
Q Consensus 571 I~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~ 650 (1392)
|||++|++|++++|+|+++|++|++++++++|++++++ +++++++++++.++ .++..+.+ ++|.++|++++..
T Consensus 152 I~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~--~~~~~~~~-~~~~~~d~~~~~~ 224 (324)
T cd08288 152 VTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRS----LGASEIIDRAELSE--PGRPLQKE-RWAGAVDTVGGHT 224 (324)
T ss_pred EECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cCCCEEEEcchhhH--hhhhhccC-cccEEEECCcHHH
Confidence 99999999999999999999999999999999999964 56789998876443 45555554 5899999998877
Q ss_pred HHHHHhcccCCeEEEEEcccccccCcccccccc-CCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeee
Q psy1119 651 LQASVRCLAQGGRFLEIGKFDLANNNMLGMEVF-MRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIF 729 (1392)
Q Consensus 651 l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~-~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf 729 (1392)
+...+.+++.+|+++.+|..... .....+..+ .+++++.++++..... .......+.+.+++.++.+++. .+.|
T Consensus 225 ~~~~~~~~~~~g~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i-~~~~ 299 (324)
T cd08288 225 LANVLAQTRYGGAVAACGLAGGA-DLPTTVMPFILRGVTLLGIDSVMAPI---ERRRAAWARLARDLDPALLEAL-TREI 299 (324)
T ss_pred HHHHHHHhcCCCEEEEEEecCCC-CCCcchhhhhccccEEEEEEeecccc---hhhHHHHHHHHHHHhcCCcccc-ceee
Confidence 88888999999999999975211 111222233 7899999986433211 1223455556667888888774 6899
Q ss_pred ccccHHHHHHHHHcCCccceEEEEe
Q psy1119 730 PEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 730 ~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+++++.+||+.+.++++.||+|+++
T Consensus 300 ~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 300 PLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred cHHHHHHHHHHHhcCCccCeEEEeC
Confidence 9999999999999999999998763
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal |
| >cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-27 Score=281.99 Aligned_cols=287 Identities=20% Similarity=0.299 Sum_probs=233.2
Q ss_pred CCceEEeCCCCcccccccCCC-CCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKD-NINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD------ 506 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~-~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~------ 506 (1392)
..+++.+.|.|. + ++++|+|+|.++|+|+.|+....|.++.. .|.++|+|++|+|.+
T Consensus 10 ~~~~~~~~~~p~--------~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--------~~~~~g~e~~G~V~~vG~~v~ 73 (344)
T cd08284 10 GDVRVEEVPIPQ--------IQDPTDAIVKVTAAAICGSDLHIYRGHIPST--------PGFVLGHEFVGEVVEVGPEVR 73 (344)
T ss_pred CCceEEeccCCC--------CCCCCeEEEEEEEeeccccchhhhcCCCCCC--------CCcccccceEEEEEeeCCCcc
Confidence 368888888875 4 48999999999999999999988876521 256899999999873
Q ss_pred ---CCCeEEEeec-------------------------------CCcccceEEeccc--ceEEcCCCCCHhhHhhhhHHH
Q psy1119 507 ---SGKRVMGLTS-------------------------------GRSLANCCETDVE--MAWEIPDQWTLEDAATVPCVY 550 (1392)
Q Consensus 507 ---vGdrV~gl~~-------------------------------~g~~a~~v~~~~~--~~~~iPd~ls~e~AA~lp~~~ 550 (1392)
+||+|+++.. .|++++|+.+++. .++++|+++++++|+++++++
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~ 153 (344)
T cd08284 74 TLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDIL 153 (344)
T ss_pred ccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCch
Confidence 6889987531 3789999999875 999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHH
Q psy1119 551 ATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQL 629 (1392)
Q Consensus 551 ~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~ 629 (1392)
+|||+++.. +++++|++||||| +|++|++++|+|+.+|+ +|+++.++++|.+++++ +++. +++.+..++.+.
T Consensus 154 ~ta~~~~~~-~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~ 226 (344)
T cd08284 154 PTGYFGAKR-AQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAA----LGAE-PINFEDAEPVER 226 (344)
T ss_pred HHHHhhhHh-cCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----hCCe-EEecCCcCHHHH
Confidence 999999954 8899999999994 79999999999999997 89999888888887765 4543 577777788889
Q ss_pred HHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHH
Q psy1119 630 VMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSL 708 (1392)
Q Consensus 630 i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~ 708 (1392)
+.+.++++|+|++||+.++ +.+..++++++++|+++.+|..+...........+.+++++.+... . ....
T Consensus 227 l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~ 297 (344)
T cd08284 227 VREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRC-P--------VRSL 297 (344)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecC-C--------cchh
Confidence 9999988899999999875 6788999999999999999976533322333456778888875421 0 1233
Q ss_pred HHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 709 QKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 709 ~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
+..+.+++.++.+++ ++.++|+++++.+||+.+.+++. ||+|++
T Consensus 298 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 298 FPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred HHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 445556788888886 46788999999999999998888 999874
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical |
| >PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-27 Score=280.32 Aligned_cols=289 Identities=18% Similarity=0.308 Sum_probs=229.5
Q ss_pred cCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--
Q psy1119 429 VRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-- 506 (1392)
Q Consensus 429 ~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~-- 506 (1392)
.++++.. +.+.|.|. +.++|++|+|.++++|+.|+....|.++.. .|.++|+|++|+|.+
T Consensus 8 ~~~~~~~--~~~~~~p~--------~~~~evlv~v~~~~i~~~d~~~~~g~~~~~--------~~~~~g~e~~G~V~~~G 69 (338)
T PRK09422 8 KDHTGDV--VVEKTLRP--------LKHGEALVKMEYCGVCHTDLHVANGDFGDK--------TGRILGHEGIGIVKEVG 69 (338)
T ss_pred CCCCCce--EEEecCCC--------CCCCeEEEEEEEEeechhHHHHHcCCCCCC--------CCccCCcccceEEEEEC
Confidence 3454432 66777764 689999999999999999999998876421 256899999999873
Q ss_pred -------CCCeEEE-----------e-----------------ecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHH
Q psy1119 507 -------SGKRVMG-----------L-----------------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYA 551 (1392)
Q Consensus 507 -------vGdrV~g-----------l-----------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~ 551 (1392)
+||+|++ + ...|++++|+.++...++++|+++++++||+++++++
T Consensus 70 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ 149 (338)
T PRK09422 70 PGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGV 149 (338)
T ss_pred CCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchh
Confidence 6888875 1 1258999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCC-ccHHHH
Q psy1119 552 TAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARY-MDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRD-TSFEQL 629 (1392)
Q Consensus 552 TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~-~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~-~~~~~~ 629 (1392)
|||+++ ..+++++|++|||+| +|++|++++|+|+. .|++|+++++++++++++++ ++.+.+++.++ .++.+.
T Consensus 150 ta~~~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~ 223 (338)
T PRK09422 150 TTYKAI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKE----VGADLTINSKRVEDVAKI 223 (338)
T ss_pred HHHHHH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHH----cCCcEEecccccccHHHH
Confidence 999998 778999999999998 69999999999998 59999999999999999965 56788888765 667778
Q ss_pred HHHHcCCCcce-EEEecCchhHHHHHHhcccCCeEEEEEcccccccCcccc-ccccCCCcEEEEEechhhhhhCHHHHHH
Q psy1119 630 VMKRTKGRGVD-LVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVMLDNFFFAEQEWKMS 707 (1392)
Q Consensus 630 i~~~T~g~GvD-vVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~ 707 (1392)
+++.++ |+| +++++.+++.+..++++++++|+++.+|..... ..++ .....++.++.+..... . .
T Consensus 224 v~~~~~--~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----~----~ 290 (338)
T PRK09422 224 IQEKTG--GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPES--MDLSIPRLVLDGIEVVGSLVGT-----R----Q 290 (338)
T ss_pred HHHhcC--CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCC--ceecHHHHhhcCcEEEEecCCC-----H----H
Confidence 887775 688 566677778899999999999999999864211 1111 12334666776643211 1 1
Q ss_pred HHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEec
Q psy1119 708 LQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 708 ~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
.++.+.+++++|.+.+.+ +.++++++++||+.+.++++.||+|+++.
T Consensus 291 ~~~~~~~l~~~g~l~~~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 291 DLEEAFQFGAEGKVVPKV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred HHHHHHHHHHhCCCCccE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 234455678888887764 46899999999999999999999998763
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-27 Score=293.39 Aligned_cols=347 Identities=18% Similarity=0.162 Sum_probs=243.9
Q ss_pred HhcCCCCCCEEE----EEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcC-ceeeCCCccHHHHHHHH
Q psy1119 559 ICGQMQKGESIL----IHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEE-NIGNSRDTSFEQLVMKR 633 (1392)
Q Consensus 559 ~~a~l~~GetVL----I~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~-~i~~s~~~~~~~~i~~~ 633 (1392)
..+++++|+.+| ||+|+|++|.+++|+++..|++|+++.+.+.++...+. .+.+ .+++++...+.+.+...
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~l~~~ 102 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWG----DRFGALVFDATGITDPADLKAL 102 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcC----CcccEEEEECCCCCCHHHHHHH
Confidence 456889999999 99999999999999999999999998877665433322 1222 57777776666666544
Q ss_pred cCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHH
Q psy1119 634 TKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQ 713 (1392)
Q Consensus 634 T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~ 713 (1392)
+ +.++..++.++++|||+.+|......... .... . ..-...+.+.+.
T Consensus 103 ~--------------~~~~~~l~~l~~~griv~i~s~~~~~~~~----------------~~~~--a-kaal~gl~rsla 149 (450)
T PRK08261 103 Y--------------EFFHPVLRSLAPCGRVVVLGRPPEAAADP----------------AAAA--A-QRALEGFTRSLG 149 (450)
T ss_pred H--------------HHHHHHHHhccCCCEEEEEccccccCCch----------------HHHH--H-HHHHHHHHHHHH
Confidence 2 45778889999999999998653211000 0000 0 000111222221
Q ss_pred HHHHcCCCCC--cceeeeccccHHHHHHHHHcCC---ccceEEEEecCCCCccccCCcccccccCCccccCCCCeEEEEc
Q psy1119 714 KAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGK---HIGKVIIKIRDEEPTKICTPKVKQLLAVPRYYADSNKSYIICG 788 (1392)
Q Consensus 714 ~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~---~~GKvVI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ylItG 788 (1392)
.-+..| +.. +.......+++.++++++.+.. ..|+++..... ... .+ . +.....++++|||||
T Consensus 150 ~E~~~g-i~v~~i~~~~~~~~~~~~~~~~l~s~~~a~~~g~~i~~~~~-~~~----~~-----~-~~~~~~~g~~vlItG 217 (450)
T PRK08261 150 KELRRG-ATAQLVYVAPGAEAGLESTLRFFLSPRSAYVSGQVVRVGAA-DAA----PP-----A-DWDRPLAGKVALVTG 217 (450)
T ss_pred HHhhcC-CEEEEEecCCCCHHHHHHHHHHhcCCccCCccCcEEEecCC-ccc----CC-----C-CcccCCCCCEEEEec
Confidence 112222 111 1011133567888999987743 45665543222 111 01 1 111234689999999
Q ss_pred CcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcCCccEEEE
Q psy1119 789 GLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLGPVDGIFN 867 (1392)
Q Consensus 789 G~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g~I~gvi~ 867 (1392)
|+||||+++|++|+++|++ +++++|+... +...... ...+. ..+.||+++.++++++++.+ +.+++||+|||
T Consensus 218 asggIG~~la~~l~~~Ga~-vi~~~~~~~~-~~l~~~~---~~~~~--~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~ 290 (450)
T PRK08261 218 AARGIGAAIAEVLARDGAH-VVCLDVPAAG-EALAAVA---NRVGG--TALALDITAPDAPARIAEHLAERHGGLDIVVH 290 (450)
T ss_pred CCCHHHHHHHHHHHHCCCE-EEEEeCCccH-HHHHHHH---HHcCC--eEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 9999999999999999998 6666765321 1122222 22233 46789999999999999998 56889999999
Q ss_pred CcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhh--hCCCCCeEEEecccccccCCCCChhHHHHHHHHHHHHHHH
Q psy1119 868 LAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRT--MCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEAR 945 (1392)
Q Consensus 868 ~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~--~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~la~~r 945 (1392)
|||+..+..+.+++.++|+.++++|+.|++++++++.+ .+.+.++||++||+++..|++++++|+++|+++++|++..
T Consensus 291 ~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~~~~l 370 (450)
T PRK08261 291 NAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQAL 370 (450)
T ss_pred CCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999866 3345589999999999999999999999999777666654
Q ss_pred ----HHcCCCeEEEEccccC
Q psy1119 946 ----RAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 946 ----~~~Glp~~ai~~g~~~ 961 (1392)
+..|.+..+|.+|.+.
T Consensus 371 a~el~~~gi~v~~v~PG~i~ 390 (450)
T PRK08261 371 APLLAERGITINAVAPGFIE 390 (450)
T ss_pred HHHHhhhCcEEEEEEeCcCc
Confidence 4458888999998764
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-27 Score=278.75 Aligned_cols=285 Identities=22% Similarity=0.406 Sum_probs=232.4
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-------- 505 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-------- 505 (1392)
+.+.+.+.|.|. +.+++|+|+|.++++|+.|++...|.++.. ..|.++|+|++|+|+
T Consensus 11 ~~~~~~~~~~p~--------~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-------~~~~~~g~e~~G~v~~~G~~v~~ 75 (332)
T cd08259 11 KPLQIEEVPDPE--------PGPGEVLIKVKAAGVCYRDLLFWKGFFPRG-------KYPLILGHEIVGTVEEVGEGVER 75 (332)
T ss_pred CceEEEEccCCC--------CCCCeEEEEEEEEecchhhhHHhcCCCCCC-------CCCeeccccceEEEEEECCCCcc
Confidence 467777877764 688999999999999999999998876532 125689999999986
Q ss_pred -eCCCeEEEee---------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHH
Q psy1119 506 -DSGKRVMGLT---------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAM 557 (1392)
Q Consensus 506 -~vGdrV~gl~---------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL 557 (1392)
++||+|+++. ..|++++|+.++...++++|++++++++++++++++|||+++
T Consensus 76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l 155 (332)
T cd08259 76 FKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHAL 155 (332)
T ss_pred CCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHH
Confidence 3689999874 147899999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCC
Q psy1119 558 FICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGR 637 (1392)
Q Consensus 558 ~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~ 637 (1392)
.. +++++|++|||+||+|++|++++++|+..|++|+++++++++++++.+ ++.+++++..+ +.+.+.+..
T Consensus 156 ~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~--- 225 (332)
T cd08259 156 KR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKE----LGADYVIDGSK--FSEDVKKLG--- 225 (332)
T ss_pred HH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH----cCCcEEEecHH--HHHHHHhcc---
Confidence 77 899999999999999999999999999999999999998888888855 45677776654 666666553
Q ss_pred cceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCc-cccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHH
Q psy1119 638 GVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNN-MLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAI 716 (1392)
Q Consensus 638 GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~-~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l 716 (1392)
++|+|+|+.+......++++++++|+++.+|........ ..... ..++.++.+.... . ....+.+.+++
T Consensus 226 ~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~----~~~~~~~~~~~ 295 (332)
T cd08259 226 GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLL-ILKEIRIIGSISA-----T----KADVEEALKLV 295 (332)
T ss_pred CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHH-HhCCcEEEEecCC-----C----HHHHHHHHHHH
Confidence 799999999988889999999999999999865432221 11112 2466776665211 1 12334455778
Q ss_pred HcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 717 DAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 717 ~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
.+|.+++.+.++|+++++++||+.+.++++.||+|++
T Consensus 296 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 296 KEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 8899998888999999999999999999999998863
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-26 Score=274.14 Aligned_cols=306 Identities=27% Similarity=0.430 Sum_probs=247.2
Q ss_pred ccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee-
Q psy1119 428 LVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD- 506 (1392)
Q Consensus 428 ~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~- 506 (1392)
..+|.+..+.|.+.+.+. +.+++++|+|.++|+|+.|+....|.++.. ...|..+|+|++|+|..
T Consensus 6 ~~~~~~~~~~~~~~~~~~--------~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~------~~~~~~~g~e~~G~v~~~ 71 (337)
T cd08275 6 TGFGGLDKLKVEKEALPE--------PSSGEVRVRVEACGLNFADLMARQGLYDSA------PKPPFVPGFECAGTVEAV 71 (337)
T ss_pred cCCCCccceEEEecCCCC--------CCCCEEEEEEEEEecCHHHHHHHCCCCCCC------CCCCCCCcceeEEEEEEE
Confidence 345666778888877653 688999999999999999999988865421 11256899999999863
Q ss_pred --------CCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Q psy1119 507 --------SGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGV 578 (1392)
Q Consensus 507 --------vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgV 578 (1392)
+||+|+++...|+|++|+.++...++++|+++++++++.++++++|||+++...+++++|++|+|||++|++
T Consensus 72 g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~ 151 (337)
T cd08275 72 GEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGV 151 (337)
T ss_pred CCCCcCCCCCCEEEEecCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchH
Confidence 578999987668999999999999999999999999999999999999999888999999999999999999
Q ss_pred HHHHHHHHHHc-CCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhc
Q psy1119 579 GQAAINLARYM-DAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRC 657 (1392)
Q Consensus 579 G~aaIqlA~~~-Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~ 657 (1392)
|++++++|+.+ +..++.+ ..+++.+++++ ++.+++++....++.+.+++.++ +++|+++|+.++.....++++
T Consensus 152 g~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~-~~~d~v~~~~g~~~~~~~~~~ 225 (337)
T cd08275 152 GLAAGQLCKTVPNVTVVGT-ASASKHEALKE----NGVTHVIDYRTQDYVEEVKKISP-EGVDIVLDALGGEDTRKSYDL 225 (337)
T ss_pred HHHHHHHHHHccCcEEEEe-CCHHHHHHHHH----cCCcEEeeCCCCcHHHHHHHHhC-CCceEEEECCcHHHHHHHHHh
Confidence 99999999999 3333222 23457788754 56678999888889888988875 789999999998888999999
Q ss_pred ccCCeEEEEEcccccccCcccc----------------ccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCC
Q psy1119 658 LAQGGRFLEIGKFDLANNNMLG----------------MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAV 721 (1392)
Q Consensus 658 La~~Gr~v~iG~~~~~~~~~l~----------------~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l 721 (1392)
++++|+++.+|..+........ ...+.+++++.++.+..+....+.. ......+.+++.++.+
T Consensus 226 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 304 (337)
T cd08275 226 LKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELL-TEVMDKLLKLYEEGKI 304 (337)
T ss_pred hccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHH-HHHHHHHHHHHHCCCC
Confidence 9999999999976533221111 2346788999998766443333322 3345556677888999
Q ss_pred CCcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 722 QPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 722 ~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
++.+.+.|+++++++||+.+.+++..||+++++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 305 KPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred CCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 888889999999999999999999899998763
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >KOG0025|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=254.84 Aligned_cols=316 Identities=17% Similarity=0.165 Sum_probs=257.2
Q ss_pred eEeeccCCCC-CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEE
Q psy1119 424 YINALVRGDM-SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSG 502 (1392)
Q Consensus 424 ~l~~~~~G~l-~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sG 502 (1392)
.+.....|++ +.|+..+.+.|. ...++|+|+..|+.|||.|+....|.||... ..|.+-|.|++|
T Consensus 22 alvY~~hgdP~kVlql~~~~~p~--------~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP------~~PAVgGnEGv~ 87 (354)
T KOG0025|consen 22 ALVYSEHGDPAKVLQLKNLELPA--------VPGSDVLVKMLAAPINPSDINQIQGVYPVRP------ELPAVGGNEGVG 87 (354)
T ss_pred eeeecccCCchhhheeecccCCC--------CCCCceeeeeeecCCChHHhhhhccccCCCC------CCCcccCCcceE
Confidence 4666778887 568888888876 3445699999999999999999999998652 237899999999
Q ss_pred EEeeCCCeEEEeecC----------CcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEE
Q psy1119 503 RLRDSGKRVMGLTSG----------RSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIH 572 (1392)
Q Consensus 503 vV~~vGdrV~gl~~~----------g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ 572 (1392)
.|+.+|+.|-|+.++ |+|+++.+.+++.++++++.++++.||++.+..+|||..|.+.-++++||+|.-.
T Consensus 88 eVv~vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQN 167 (354)
T KOG0025|consen 88 EVVAVGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQN 167 (354)
T ss_pred EEEEecCCcCccCCCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeec
Confidence 999777776665543 8999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHH
Q psy1119 573 AGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQ 652 (1392)
Q Consensus 573 ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~ 652 (1392)
||.++||++.||+|+++|.+-+-++++....+.|++.+-.+|+++++......-.+..+.......+-+.|||+||....
T Consensus 168 ganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~ 247 (354)
T KOG0025|consen 168 GANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSAT 247 (354)
T ss_pred CcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHH
Confidence 99999999999999999999999999877777777666679999999633211111112222445789999999999888
Q ss_pred HHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhC--HHHHHHHHHHHHHHHHcCCCCCcceeeec
Q psy1119 653 ASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAE--QEWKMSLQKALQKAIDAGAVQPLVRTIFP 730 (1392)
Q Consensus 653 ~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~--~~~~~~~~~~~~~~l~~g~l~pl~~~vf~ 730 (1392)
...+.|..||+++.+|...-.+.......++.|+++++|+.+..+.... ++.+.++...+.+++..|+++.......+
T Consensus 248 ~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~ 327 (354)
T KOG0025|consen 248 EIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVP 327 (354)
T ss_pred HHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeee
Confidence 8899999999999999875554443334556799999999999887765 78888889999999999999998888889
Q ss_pred cccHHHHHHHHHcCC-ccceEEEE
Q psy1119 731 EDKVEEAFRYMAAGK-HIGKVIIK 753 (1392)
Q Consensus 731 l~ev~eA~~~l~~g~-~~GKvVI~ 753 (1392)
+.+-..|++...... ..||-++.
T Consensus 328 L~~~~tald~~L~~~~~~~Kq~i~ 351 (354)
T KOG0025|consen 328 LADHKTALDAALSKFGKSGKQIIV 351 (354)
T ss_pred chhhhHHHHHHHHHhccCCceEEE
Confidence 999888887544332 22454443
|
|
| >cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-27 Score=278.10 Aligned_cols=287 Identities=21% Similarity=0.296 Sum_probs=230.5
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR--------- 505 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~--------- 505 (1392)
.+.+++.+.|. +.+++|+|+|.++++|+.|+.+..|.++.. ..|.++|+|++|+|.
T Consensus 11 ~~~~~~~~~~~--------l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~-------~~~~~~g~~~~G~V~~~G~~v~~~ 75 (343)
T cd08235 11 DVRLEEVPVPE--------PGPGEVLVKVRACGICGTDVKKIRGGHTDL-------KPPRILGHEIAGEIVEVGDGVTGF 75 (343)
T ss_pred ceEEEEccCCC--------CCCCeEEEEEEEeeeccccHHHHcCCCccC-------CCCcccccceEEEEEeeCCCCCCC
Confidence 47788887764 688999999999999999999998866311 125689999999987
Q ss_pred eCCCeEEEee---------------------------cCCcccceEEecccc-----eEEcCCCCCHhhHhhhhHHHHHH
Q psy1119 506 DSGKRVMGLT---------------------------SGRSLANCCETDVEM-----AWEIPDQWTLEDAATVPCVYATA 553 (1392)
Q Consensus 506 ~vGdrV~gl~---------------------------~~g~~a~~v~~~~~~-----~~~iPd~ls~e~AA~lp~~~~TA 553 (1392)
++||+|+++. ..|+|++|+.+++.. ++++|+++++++||.+ ++++||
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a 154 (343)
T cd08235 76 KVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACC 154 (343)
T ss_pred CCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHH
Confidence 3688998762 248999999999998 9999999999999876 789999
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHH
Q psy1119 554 VYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMK 632 (1392)
Q Consensus 554 ~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~ 632 (1392)
|+++.. .++++|++||||| +|++|++++|+|+..|++ |+++++++++.+++++ ++.++++++++.++.+.+++
T Consensus 155 ~~~l~~-~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~----~g~~~~~~~~~~~~~~~i~~ 228 (343)
T cd08235 155 INAQRK-AGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKK----LGADYTIDAAEEDLVEKVRE 228 (343)
T ss_pred HHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----hCCcEEecCCccCHHHHHHH
Confidence 999954 5899999999995 699999999999999999 9999999999998864 45688999998899999999
Q ss_pred HcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhhhhhCHHHHHHHHH
Q psy1119 633 RTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFFAEQEWKMSLQK 710 (1392)
Q Consensus 633 ~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~ 710 (1392)
.++++++|+|+|+.++ ..+..++++++++|+++.+|...........+ ....+++++.+.... .+ ...+
T Consensus 229 ~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~----~~~~ 299 (343)
T cd08235 229 LTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAA-----SP----EDYK 299 (343)
T ss_pred HhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecC-----Ch----hhHH
Confidence 9998999999999985 47889999999999999998653321111111 122355555554321 12 2234
Q ss_pred HHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 711 ALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 711 ~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
.+.+++++|.+++ .+..+|+++++.+||+.+.+++ .||+|+.
T Consensus 300 ~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 300 EALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred HHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 4556788888874 4668899999999999999999 9999863
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i |
| >cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-27 Score=282.25 Aligned_cols=290 Identities=18% Similarity=0.256 Sum_probs=226.0
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~-------- 506 (1392)
.+.+.+.|.|. +.+++|+|||.++|+|++|++...|.++. ..|.++|||++|+|++
T Consensus 19 ~~~l~~~p~p~--------~~~~~vlvkv~~~gi~~~D~~~~~g~~~~--------~~p~v~G~e~~G~V~~vG~~v~~~ 82 (373)
T cd08299 19 PFSIEEIEVAP--------PKAHEVRIKIVATGICRSDDHVVSGKLVT--------PFPVILGHEAAGIVESVGEGVTTV 82 (373)
T ss_pred CcEEEEeecCC--------CCCCEEEEEEEEEEcCcccHHHhcCCCCC--------CCCccccccceEEEEEeCCCCccC
Confidence 36777888775 68899999999999999999999887632 1367899999999873
Q ss_pred -CCCeEEEee------------------------------------------------cCCcccceEEecccceEEcCCC
Q psy1119 507 -SGKRVMGLT------------------------------------------------SGRSLANCCETDVEMAWEIPDQ 537 (1392)
Q Consensus 507 -vGdrV~gl~------------------------------------------------~~g~~a~~v~~~~~~~~~iPd~ 537 (1392)
+||+|+.+. ..|+|++|+++++..++++|++
T Consensus 83 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~ 162 (373)
T cd08299 83 KPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAA 162 (373)
T ss_pred CCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCC
Confidence 678887641 1378999999999999999999
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcC
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEE 616 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~ 616 (1392)
++++++|+++++++|||+++...+++++|++|||+ |+|++|++++|+|+++|+ +|++++++++|++++++ ++++
T Consensus 163 l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~-G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~----lGa~ 237 (373)
T cd08299 163 APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVF-GLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKE----LGAT 237 (373)
T ss_pred CChHHhheeccchHHHHHHHHhccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc
Confidence 99999999999999999998888999999999999 569999999999999999 79999999999999965 6778
Q ss_pred ceeeCCCcc--HHHHHHHHcCCCcceEEEecCch-hHHHHHHhc-ccCCeEEEEEcccccccCccccccccCCCcEEEEE
Q psy1119 617 NIGNSRDTS--FEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRC-LAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGV 692 (1392)
Q Consensus 617 ~i~~s~~~~--~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~-La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~ 692 (1392)
++++..+.+ +.+.+++.++ +++|+|+|+.++ ..+..++.. ++++|+++.+|.........+....+.++.++.++
T Consensus 238 ~~i~~~~~~~~~~~~v~~~~~-~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~ 316 (373)
T cd08299 238 ECINPQDYKKPIQEVLTEMTD-GGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGA 316 (373)
T ss_pred eEecccccchhHHHHHHHHhC-CCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEE
Confidence 999877544 7778888877 589999999985 567776665 46799999999753221111222224567888887
Q ss_pred echhhhhhCHHHHHHHHHHHHHHHHcCC--CCCcceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 693 MLDNFFFAEQEWKMSLQKALQKAIDAGA--VQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~--l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
....+.. .+.... +...+.++. +++++.++|+++++.+||+.+.+++. .|++++
T Consensus 317 ~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~ 372 (373)
T cd08299 317 VFGGWKS--KDSVPK----LVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLT 372 (373)
T ss_pred EecCCcc--HHHHHH----HHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEe
Confidence 6544221 111111 222333443 44567899999999999999987765 477765
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically |
| >cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-27 Score=277.94 Aligned_cols=283 Identities=18% Similarity=0.253 Sum_probs=229.3
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee-------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD------- 506 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~------- 506 (1392)
++|++.+.+.|. +.++|++|+|.++|+|+.|+....|.++.. ..|.++|||++|+|.+
T Consensus 10 ~~~~~~~~~~p~--------~~~~evlirv~a~~i~~~d~~~~~g~~~~~-------~~p~~~g~e~~G~V~~vG~~v~~ 74 (337)
T cd05283 10 GKLEPFTFERRP--------LGPDDVDIKITYCGVCHSDLHTLRNEWGPT-------KYPLVPGHEIVGIVVAVGSKVTK 74 (337)
T ss_pred CCceEEeccCCC--------CCCCeEEEEEEEecccchHHHHhcCCcCCC-------CCCcccCcceeeEEEEECCCCcc
Confidence 678888888875 689999999999999999999998876322 1367899999999863
Q ss_pred --CCCeEEEe-----------------------------------ecCCcccceEEecccceEEcCCCCCHhhHhhhhHH
Q psy1119 507 --SGKRVMGL-----------------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCV 549 (1392)
Q Consensus 507 --vGdrV~gl-----------------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~ 549 (1392)
+||+|... ...|++++|+.+++..++++|++++++++|.++++
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~ 154 (337)
T cd05283 75 FKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA 154 (337)
T ss_pred cCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhH
Confidence 67888621 23588999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHH
Q psy1119 550 YATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQL 629 (1392)
Q Consensus 550 ~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~ 629 (1392)
+.|||+++... .+++|++|+|. |+|++|++++|+|+.+|++|+++++++++++++++ ++.+++++.++.++.+.
T Consensus 155 ~~ta~~~~~~~-~~~~g~~vlV~-g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~ 228 (337)
T cd05283 155 GITVYSPLKRN-GVGPGKRVGVV-GIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALK----LGADEFIATKDPEAMKK 228 (337)
T ss_pred HHHHHHHHHhc-CCCCCCEEEEE-CCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH----cCCcEEecCcchhhhhh
Confidence 99999998654 58999999997 57999999999999999999999999999999865 56788888776554322
Q ss_pred HHHHcCCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHH
Q psy1119 630 VMKRTKGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSL 708 (1392)
Q Consensus 630 i~~~T~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~ 708 (1392)
.++++|+|+|+.++. ....++++++++|+++.+|..+... ......++.+++++.+..... . ..
T Consensus 229 -----~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~-----~----~~ 293 (337)
T cd05283 229 -----AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPL-PVPPFPLIFGRKSVAGSLIGG-----R----KE 293 (337)
T ss_pred -----ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCC-ccCHHHHhcCceEEEEecccC-----H----HH
Confidence 246899999999876 4889999999999999999754322 111123356889988875432 2 12
Q ss_pred HHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 709 QKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 709 ~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
.+.+.+++.+|.+++.+ ++|+++++++||+.+.++++.||+|++
T Consensus 294 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 294 TQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 34445677888888764 789999999999999999999998874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-26 Score=270.80 Aligned_cols=309 Identities=27% Similarity=0.413 Sum_probs=253.5
Q ss_pred eccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-
Q psy1119 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR- 505 (1392)
Q Consensus 427 ~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~- 505 (1392)
...+|....+.|.+.+ +. + ..+++++|+|.++++|+.|+....|.+.... ..+.++|+|++|+|.
T Consensus 6 ~~~~~~~~~~~~~~~~-~~-~------~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~------~~~~~~g~e~~G~v~~ 71 (323)
T cd08241 6 CKELGGPEDLVLEEVP-PE-P------GAPGEVRIRVEAAGVNFPDLLMIQGKYQVKP------PLPFVPGSEVAGVVEA 71 (323)
T ss_pred EecCCCcceeEEecCC-CC-C------CCCCeEEEEEEEEecCHHHHHHHcCCCCCCC------CCCCcccceeEEEEEE
Confidence 3345666778888776 54 1 2359999999999999999999888653221 125579999999986
Q ss_pred --------eCCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCch
Q psy1119 506 --------DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGG 577 (1392)
Q Consensus 506 --------~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~Gg 577 (1392)
++|++|+++...|++++++.++...++++|+++++.+++++++++++||+++...+++++|++|+|+|++|+
T Consensus 72 ~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~ 151 (323)
T cd08241 72 VGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGG 151 (323)
T ss_pred eCCCCCCCCCCCEEEEecCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCch
Confidence 358899987635789999999999999999999999999999999999999988889999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhc
Q psy1119 578 VGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRC 657 (1392)
Q Consensus 578 VG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~ 657 (1392)
+|++++++|+..|++|+++++++++++++++ ++.+.+++....++.+.+++.++++++|+++|+.++..+..++++
T Consensus 152 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~ 227 (323)
T cd08241 152 VGLAAVQLAKALGARVIAAASSEEKLALARA----LGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRS 227 (323)
T ss_pred HHHHHHHHHHHhCCEEEEEeCCHHHHHHHHH----cCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHh
Confidence 9999999999999999999999999999865 456788888888898999999998899999999998888899999
Q ss_pred ccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHH
Q psy1119 658 LAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEA 737 (1392)
Q Consensus 658 La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA 737 (1392)
++++|+++.+|..............+.+++++.+..+..+....+.......+.+.+++.++.+.++++..|+++++.+|
T Consensus 228 ~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (323)
T cd08241 228 LAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEA 307 (323)
T ss_pred hccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHH
Confidence 99999999998642111101111345688999998766554444444455666677888899998888899999999999
Q ss_pred HHHHHcCCccceEEEE
Q psy1119 738 FRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 738 ~~~l~~g~~~GKvVI~ 753 (1392)
|+++..+...||++++
T Consensus 308 ~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 308 LRALADRKATGKVVLT 323 (323)
T ss_pred HHHHHhCCCCCcEEeC
Confidence 9999998888998863
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=274.38 Aligned_cols=294 Identities=20% Similarity=0.264 Sum_probs=237.0
Q ss_pred cCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---
Q psy1119 429 VRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR--- 505 (1392)
Q Consensus 429 ~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~--- 505 (1392)
.++++. +.+.+.|.|. +.+++|+|+|.++++|+.|+....|.++.. ...|.++|+|++|+|.
T Consensus 8 ~~~~~~-~~~~~~~~~~--------~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~------~~~~~~~g~~~~G~v~~~G 72 (338)
T cd08254 8 KGSKGL-LVLEEVPVPE--------PGPGEVLVKVKAAGVCHSDLHILDGGVPTL------TKLPLTLGHEIAGTVVEVG 72 (338)
T ss_pred cCCCCc-eEEeccCCCC--------CCCCeEEEEEEEEeeccHhHHHHcCCCccc------CCCCEeccccccEEEEEEC
Confidence 344444 6666666654 689999999999999999999999877521 1235689999999986
Q ss_pred ------eCCCeEEE------------------e---------ecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHH
Q psy1119 506 ------DSGKRVMG------------------L---------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYAT 552 (1392)
Q Consensus 506 ------~vGdrV~g------------------l---------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~T 552 (1392)
++||+|++ + ..+|++++|+.++...++++|++++++++++++.+++|
T Consensus 73 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~t 152 (338)
T cd08254 73 AGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLT 152 (338)
T ss_pred CCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHH
Confidence 36888875 2 12588999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHH
Q psy1119 553 AVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMK 632 (1392)
Q Consensus 553 A~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~ 632 (1392)
||+++...+++++|++|||+ |+|++|++++++|+..|++|++++.++++++++++ ++.+++++.++..+.+.+ +
T Consensus 153 a~~~l~~~~~~~~~~~vli~-g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~----~g~~~~~~~~~~~~~~~~-~ 226 (338)
T cd08254 153 PYHAVVRAGEVKPGETVLVI-GLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKE----LGADEVLNSLDDSPKDKK-A 226 (338)
T ss_pred HHHHHHhccCCCCCCEEEEE-CCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----hCCCEEEcCCCcCHHHHH-H
Confidence 99999888899999999997 56999999999999999999999999999999965 456888888877777777 6
Q ss_pred HcCCCcceEEEecCc-hhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHH
Q psy1119 633 RTKGRGVDLVLNSLA-EEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKA 711 (1392)
Q Consensus 633 ~T~g~GvDvVlds~~-~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~ 711 (1392)
.+.++++|+|+|+++ ...+..++++|+++|+++.+|......... ...++.++.++.+..... ....+.
T Consensus 227 ~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~ 296 (338)
T cd08254 227 AGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVD-LSDLIARELRIIGSFGGT---------PEDLPE 296 (338)
T ss_pred HhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccC-HHHHhhCccEEEEeccCC---------HHHHHH
Confidence 777889999999996 467889999999999999998643211111 123455677777643221 123445
Q ss_pred HHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 712 LQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 712 ~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+.+++++|.+.+. .++|+++++.+|++.+.++++.||+|+++
T Consensus 297 ~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 297 VLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred HHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 5567888998877 77899999999999999999999999864
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio |
| >cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.8e-27 Score=279.64 Aligned_cols=289 Identities=18% Similarity=0.268 Sum_probs=229.5
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~-------- 506 (1392)
.+.+.+.+.|. +.+++++|+|.++|+|+.|++...|.++.. .|.++|||++|+|.+
T Consensus 12 ~~~~~~~~~p~--------~~~~~vlv~v~~~~i~~~d~~~~~g~~~~~--------~~~i~g~e~~G~V~~vG~~v~~~ 75 (365)
T cd05279 12 PLSIEEIEVAP--------PKAGEVRIKVVATGVCHTDLHVIDGKLPTP--------LPVILGHEGAGIVESIGPGVTTL 75 (365)
T ss_pred CcEEEEeecCC--------CCCCeEEEEEEEeeecchhHHHhcCCCCCC--------CCcccccceeEEEEEeCCCcccC
Confidence 36677777765 688999999999999999999998876421 357899999999873
Q ss_pred -CCCeEEEee------------------------------------------------cCCcccceEEecccceEEcCCC
Q psy1119 507 -SGKRVMGLT------------------------------------------------SGRSLANCCETDVEMAWEIPDQ 537 (1392)
Q Consensus 507 -vGdrV~gl~------------------------------------------------~~g~~a~~v~~~~~~~~~iPd~ 537 (1392)
+||+|+++. ..|+|++|+.+++..++++|++
T Consensus 76 ~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 155 (365)
T cd05279 76 KPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPD 155 (365)
T ss_pred CCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCC
Confidence 578887652 1268999999999999999999
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCCCcC
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIKEE 616 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~~~ 616 (1392)
+++++|++++++++|||+++...+++++|++|||| |+|++|++++|+|+++|++ |+++.++++|++++++ ++.+
T Consensus 156 ~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~-g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~----~g~~ 230 (365)
T cd05279 156 APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVF-GLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQ----LGAT 230 (365)
T ss_pred CCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH----hCCC
Confidence 99999999999999999999889999999999999 5699999999999999996 6677778999999865 5778
Q ss_pred ceeeCCCc--cHHHHHHHHcCCCcceEEEecCch-hHHHHHHhccc-CCeEEEEEcccccccCccccccccCCCcEEEEE
Q psy1119 617 NIGNSRDT--SFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLA-QGGRFLEIGKFDLANNNMLGMEVFMRETSFHGV 692 (1392)
Q Consensus 617 ~i~~s~~~--~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La-~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~ 692 (1392)
++++.++. ++.+.+++.++ +++|+|+|+.+. ..+..++++++ ++|+++.+|.........+....+.++.++.|.
T Consensus 231 ~~v~~~~~~~~~~~~l~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~ 309 (365)
T cd05279 231 ECINPRDQDKPIVEVLTEMTD-GGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDLLTGRTIKGT 309 (365)
T ss_pred eecccccccchHHHHHHHHhC-CCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHHhcCCeEEEE
Confidence 89988777 78888888885 799999999874 78889999999 999999998653222222222222566777775
Q ss_pred echhhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEE
Q psy1119 693 MLDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI 752 (1392)
....+.. ......+.+++++|.+.+ ++.++|+++++++||+.+.+++.. |+++
T Consensus 310 ~~~~~~~------~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 310 VFGGWKS------KDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred eccCCch------HhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 4332211 122334556778888775 578899999999999999887764 5544
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall |
| >smart00829 PKS_ER Enoylreductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=266.74 Aligned_cols=276 Identities=46% Similarity=0.755 Sum_probs=232.9
Q ss_pred EEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---------eCCCeEEEeecCCcccceEEecccce
Q psy1119 461 AQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR---------DSGKRVMGLTSGRSLANCCETDVEMA 531 (1392)
Q Consensus 461 V~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~---------~vGdrV~gl~~~g~~a~~v~~~~~~~ 531 (1392)
|+|.++|+|+.|++...|.++. +.++|+|++|+|. ++||+|+++.. |+|++|+.++.+.+
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~~----------~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-g~~~~~~~~~~~~~ 70 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLPG----------EAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAP-GSFATYVRTDARLV 70 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCCC----------CCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcC-CceeeEEEccHHHe
Confidence 7899999999999999886542 4589999999986 36889988754 78999999999999
Q ss_pred EEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCC
Q psy1119 532 WEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFP 611 (1392)
Q Consensus 532 ~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p 611 (1392)
+++|+++++++++++++++.|+|+++...+.+.+|++|+|+|++|++|++++|+|+.+|++|+++++++++.+++++
T Consensus 71 ~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~--- 147 (288)
T smart00829 71 VPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRE--- 147 (288)
T ss_pred EECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---
Confidence 99999999999999999999999999888999999999999999999999999999999999999999999999864
Q ss_pred CCCc--CceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEE
Q psy1119 612 FIKE--ENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSF 689 (1392)
Q Consensus 612 ~l~~--~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~ 689 (1392)
++. +++++..+.++.+.+.+.++++++|+++|+++++....++++++++|+++.+|..+........+..+.+++++
T Consensus 148 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~ 226 (288)
T smart00829 148 -LGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAPFRRNVSY 226 (288)
T ss_pred -cCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhhhcCCceE
Confidence 455 78888888888888998888889999999998888889999999999999999764332223344456788888
Q ss_pred EEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEE
Q psy1119 690 HGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 690 ~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI 752 (1392)
.++.+..+. ..+.........+.+++.++.+.+...+.|+++++++||+.+..++..||+++
T Consensus 227 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 227 HAVDLDALE-EGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred EEEEHHHhh-cChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 888765433 23333334455666788888888777788999999999999999888888763
|
Enoylreductase in Polyketide synthases. |
| >cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-27 Score=281.08 Aligned_cols=310 Identities=22% Similarity=0.332 Sum_probs=228.7
Q ss_pred ccCCCCC-CceEEeCCCCcccccccCCC-CCCeEEEEEEEEecChhhHHHhcCCCChhh----hh----hhccccccccc
Q psy1119 428 LVRGDMS-SLTWEQGPVNMKTWKKYSKD-NINHDIAQIYYSSINFRDIMLTTAKLAPEV----IE----SRRLYQHCVIG 497 (1392)
Q Consensus 428 ~~~G~l~-~l~~~~~~~~~~~~~~~~~~-~~~evlV~V~a~gln~~Dv~~~~G~~~~~~----~~----~~~~~~p~~lG 497 (1392)
..+|.++ .+.+.+.+.|. | .+++|+|+|.++|+|+.|+.+..|...... .+ ......|.++|
T Consensus 7 ~~~~~~~~~~~~~~~~~p~--------~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G 78 (350)
T cd08248 7 HSYGGIDSLLLLENARIPV--------IRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLG 78 (350)
T ss_pred cccCCCcceeeecccCCCC--------CCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeec
Confidence 3455543 36677777664 5 489999999999999999999888421000 00 00112367899
Q ss_pred eeeEEEEee---------CCCeEEEee---cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCC
Q psy1119 498 FEYSGRLRD---------SGKRVMGLT---SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQK 565 (1392)
Q Consensus 498 ~E~sGvV~~---------vGdrV~gl~---~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~ 565 (1392)
+|++|+|.. +||+|+++. ..|+|++|+.+++..++++|+++++++++.+++++.|||+++...+.+.+
T Consensus 79 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~ 158 (350)
T cd08248 79 RDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNP 158 (350)
T ss_pred ceeEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCC
Confidence 999999873 578888865 25899999999999999999999999999999999999999988888765
Q ss_pred ----CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceE
Q psy1119 566 ----GESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDL 641 (1392)
Q Consensus 566 ----GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDv 641 (1392)
|++|+|+|++|++|++++++|+++|++|++++++ ++.+.+++ ++.+++++..+.++.+.+. .++++|+
T Consensus 159 ~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~----~g~~~~~~~~~~~~~~~l~---~~~~vd~ 230 (350)
T cd08248 159 KNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKS----LGADDVIDYNNEDFEEELT---ERGKFDV 230 (350)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHH----hCCceEEECCChhHHHHHH---hcCCCCE
Confidence 9999999999999999999999999999988865 56665554 4668888887767666554 3468999
Q ss_pred EEecCchhHHHHHHhcccCCeEEEEEcccccccCccccc--cccCCCcEEEEEechhhhhhC------HHHHHHHHHHHH
Q psy1119 642 VLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGM--EVFMRETSFHGVMLDNFFFAE------QEWKMSLQKALQ 713 (1392)
Q Consensus 642 Vlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~--~~~~k~~s~~g~~~~~~~~~~------~~~~~~~~~~~~ 713 (1392)
++|+.++..+..++++++++|+++.+|............ ..+...+++.......+.... ..........+.
T Consensus 231 vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (350)
T cd08248 231 ILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELA 310 (350)
T ss_pred EEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHH
Confidence 999999888899999999999999998653222111111 111112222111111110000 000123455566
Q ss_pred HHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 714 KAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 714 ~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
+++.+|.+.+.+.++|+++++.+||+.+.+++..||++++
T Consensus 311 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 311 KLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 7888999888888999999999999999998888898863
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=275.90 Aligned_cols=289 Identities=20% Similarity=0.330 Sum_probs=233.9
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~-------- 506 (1392)
.+.+.+.|.|. + +.+++|+|+|.++++|+.|+....|.++.. ..|.++|||++|+|++
T Consensus 11 ~~~~~~~~~p~-~------~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~-------~~~~~~g~e~~G~V~~~G~~v~~~ 76 (345)
T cd08286 11 KISWEDRPKPT-I------QEPTDAIVKMLKTTICGTDLHILKGDVPTV-------TPGRILGHEGVGVVEEVGSAVTNF 76 (345)
T ss_pred ceeEEecCCCC-C------CCCCeEEEEEEEeeecchhhHHHcCCCCCC-------CCCceecccceEEEEEeccCcccc
Confidence 48888888875 1 378999999999999999999999976532 1257899999999873
Q ss_pred -CCCeEEEee----------------------------cCCcccceEEeccc--ceEEcCCCCCHhhHhhhhHHHHHHHH
Q psy1119 507 -SGKRVMGLT----------------------------SGRSLANCCETDVE--MAWEIPDQWTLEDAATVPCVYATAVY 555 (1392)
Q Consensus 507 -vGdrV~gl~----------------------------~~g~~a~~v~~~~~--~~~~iPd~ls~e~AA~lp~~~~TA~~ 555 (1392)
+||+|+.+. .+|++++|+.++.. .++++|++++.++||.++++++|||+
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 156 (345)
T cd08286 77 KVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYE 156 (345)
T ss_pred CCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHH
Confidence 578887642 13789999999988 89999999999999999999999999
Q ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHc
Q psy1119 556 AMFICGQMQKGESILIHAGSGGVGQAAINLARYMD-AEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRT 634 (1392)
Q Consensus 556 aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~G-a~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T 634 (1392)
++...+++++|++|||+| +|++|++++|+|+.+| ++|+++..+++|.+++++ ++++++++.+..++...+.+.+
T Consensus 157 ~~~~~~~~~~g~~vlI~g-~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~----~g~~~~v~~~~~~~~~~i~~~~ 231 (345)
T cd08286 157 CGVLNGKVKPGDTVAIVG-AGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKK----LGATHTVNSAKGDAIEQVLELT 231 (345)
T ss_pred HHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCCceeccccccHHHHHHHHh
Confidence 888888999999999985 5999999999999999 788887777788777765 5678999988888888899888
Q ss_pred CCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhhhhhCHHHHHHHHHHH
Q psy1119 635 KGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFFAEQEWKMSLQKAL 712 (1392)
Q Consensus 635 ~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~ 712 (1392)
+++++|+|||++++ ..++.++++|+++|+++.+|..... ....+ ..+.+++++.+..... .....+
T Consensus 232 ~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 299 (345)
T cd08286 232 DGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKP--VDLHLEKLWIKNITITTGLVDT----------NTTPML 299 (345)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCC--CCcCHHHHhhcCcEEEeecCch----------hhHHHH
Confidence 88899999999874 5778899999999999999865322 12222 2377889988753221 123445
Q ss_pred HHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCc--cceEEEEe
Q psy1119 713 QKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKH--IGKVIIKI 754 (1392)
Q Consensus 713 ~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~--~GKvVI~~ 754 (1392)
.+++++|.+++ ++.++|+++++++||+.+....+ ..|+||++
T Consensus 300 ~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 300 LKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred HHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 56778888876 35789999999999999987754 34888853
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers ( |
| >cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=271.58 Aligned_cols=290 Identities=17% Similarity=0.206 Sum_probs=229.3
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHh-cCCCChhhhhhhccccccccceeeEEEEee------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLT-TAKLAPEVIESRRLYQHCVIGFEYSGRLRD------ 506 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~-~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~------ 506 (1392)
+.+++.+.+.|. +.+++|+|+|.|+|+|+.|+... .|..+.. . ...|.++|+|++|+|++
T Consensus 5 ~~~~~~~~~~~~--------l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~-~----~~~~~~~g~e~~G~V~~vG~~v~ 71 (312)
T cd08269 5 GRFEVEEHPRPT--------PGPGQVLVRVEGCGVCGSDLPAFNQGRPWFV-Y----PAEPGGPGHEGWGRVVALGPGVR 71 (312)
T ss_pred CeeEEEECCCCC--------CCCCeEEEEEEEeeecccchHHHccCCCCcc-c----CCCCcccceeeEEEEEEECCCCc
Confidence 457888888765 68999999999999999999987 7764321 0 01256899999999873
Q ss_pred ---CCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhh-HHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHH
Q psy1119 507 ---SGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVP-CVYATAVYAMFICGQMQKGESILIHAGSGGVGQAA 582 (1392)
Q Consensus 507 ---vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp-~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aa 582 (1392)
+||+|+++. .|+|++|+.++++.++++|+++ . +++++ .+++|+++++. .+++++|++||||| +|++|+++
T Consensus 72 ~~~~Gd~V~~~~-~g~~~~~~~v~~~~~~~lP~~~--~-~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~ 145 (312)
T cd08269 72 GLAVGDRVAGLS-GGAFAEYDLADADHAVPLPSLL--D-GQAFPGEPLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLF 145 (312)
T ss_pred CCCCCCEEEEec-CCcceeeEEEchhheEECCCch--h-hhHHhhhhHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHH
Confidence 678888865 4789999999999999999998 2 33444 78999999986 88999999999995 69999999
Q ss_pred HHHHHHcCCE-EEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccC
Q psy1119 583 INLARYMDAE-IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQ 660 (1392)
Q Consensus 583 IqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~ 660 (1392)
+|+|+.+|++ |+++.+++++++++++ ++.+++++.+..++.+.+++.++++|+|+++|+.++ .....+++++++
T Consensus 146 ~~la~~~g~~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~ 221 (312)
T cd08269 146 LQLAAAAGARRVIAIDRRPARLALARE----LGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAE 221 (312)
T ss_pred HHHHHHcCCcEEEEECCCHHHHHHHHH----hCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhcc
Confidence 9999999999 9999998888887654 567889988888899999999998999999999865 568899999999
Q ss_pred CeEEEEEcccccccCcccc-ccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHH
Q psy1119 661 GGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEA 737 (1392)
Q Consensus 661 ~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA 737 (1392)
+|+++.+|..+.. ..... .....+++++.+..... +......++.+.+++++|.+.+ .+.++|+++++++|
T Consensus 222 ~g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a 295 (312)
T cd08269 222 RGRLVIFGYHQDG-PRPVPFQTWNWKGIDLINAVERD-----PRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDA 295 (312)
T ss_pred CCEEEEEccCCCC-CcccCHHHHhhcCCEEEEecccC-----ccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHH
Confidence 9999999965421 11222 12345666666543221 2222345566667889999887 36788999999999
Q ss_pred HHHHHcCCc-cceEEE
Q psy1119 738 FRYMAAGKH-IGKVII 752 (1392)
Q Consensus 738 ~~~l~~g~~-~GKvVI 752 (1392)
|+.+.+++. .+|+++
T Consensus 296 ~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 296 FEAARRRPDGFIKGVI 311 (312)
T ss_pred HHHHHhCCCCceEEEe
Confidence 999999876 578876
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=275.67 Aligned_cols=294 Identities=19% Similarity=0.217 Sum_probs=223.9
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCCh-hhh--h-hhccccccccceeeEEEEee----
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAP-EVI--E-SRRLYQHCVIGFEYSGRLRD---- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~-~~~--~-~~~~~~p~~lG~E~sGvV~~---- 506 (1392)
.+++.+.+.|. +++++|+|+|.++|+|+.|+....|..+. +.. . ......|.++|+|++|+|.+
T Consensus 10 ~~~~~~~~~p~--------~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~ 81 (341)
T cd08262 10 PLVVRDVPDPE--------PGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPG 81 (341)
T ss_pred ceEEEecCCCC--------CCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCCC
Confidence 67888888765 68999999999999999999999883210 000 0 00011366899999999763
Q ss_pred ------CCCeEEEee-----------------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCC
Q psy1119 507 ------SGKRVMGLT-----------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQM 563 (1392)
Q Consensus 507 ------vGdrV~gl~-----------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l 563 (1392)
+||+|+++. ..|+|++|+.+++..++++|+++++++|+ ++++++|||+++ ..+++
T Consensus 82 v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~ 159 (341)
T cd08262 82 TERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARL 159 (341)
T ss_pred CcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCC
Confidence 588888862 35899999999999999999999999887 677999999995 78999
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEE-EEEecChhhHHHHHHHCCCCCcCceeeCCCccHHH---HHHHHcCCCcc
Q psy1119 564 QKGESILIHAGSGGVGQAAINLARYMDAEI-FTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQ---LVMKRTKGRGV 639 (1392)
Q Consensus 564 ~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V-~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~---~i~~~T~g~Gv 639 (1392)
++|++||||| +|++|++++|+|+.+|+++ +++..+++|.+++++ ++.+++++++..+..+ .+.+.+.++++
T Consensus 160 ~~g~~VlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 234 (341)
T cd08262 160 TPGEVALVIG-CGPIGLAVIAALKARGVGPIVASDFSPERRALALA----MGADIVVDPAADSPFAAWAAELARAGGPKP 234 (341)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----cCCcEEEcCCCcCHHHHHHHHHHHhCCCCC
Confidence 9999999995 5999999999999999984 555567777777765 5668899877653322 45666777899
Q ss_pred eEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHc
Q psy1119 640 DLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDA 718 (1392)
Q Consensus 640 DvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 718 (1392)
|+|+|+.++ ..+..+++|++++|+++.+|....... ...+..+.+++++.+.... .++ ....+.+++.+
T Consensus 235 d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~l~~~ 304 (341)
T cd08262 235 AVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDN-IEPALAIRKELTLQFSLGY-----TPE----EFADALDALAE 304 (341)
T ss_pred CEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCc-cCHHHHhhcceEEEEEecc-----cHH----HHHHHHHHHHc
Confidence 999999987 477889999999999999996532211 1111223466666654221 121 23445567888
Q ss_pred CCCCCc--ceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 719 GAVQPL--VRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 719 g~l~pl--~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
|.+.+. +.++|+++++++||+.+.++++.||+|++
T Consensus 305 g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 305 GKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred CCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 988763 47899999999999999999999999874
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=277.33 Aligned_cols=306 Identities=20% Similarity=0.260 Sum_probs=226.4
Q ss_pred ccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee-
Q psy1119 428 LVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD- 506 (1392)
Q Consensus 428 ~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~- 506 (1392)
..+|.+..++.++.|.|.. +.+++|+|+|.++|+|++|+....+..... ...|.++|+|++|+|.+
T Consensus 7 ~~~~~~~~~~~~~~~~p~~-------~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~------~~~~~~~g~e~~G~V~~v 73 (352)
T cd08247 7 KNNTSPLTITTIKLPLPNC-------YKDNEIVVKVHAAALNPVDLKLYNSYTFHF------KVKEKGLGRDYSGVIVKV 73 (352)
T ss_pred ecCCCcceeeccCCCCCCC-------CCCCeEEEEEEEEecChHhHHHhccccccc------ccCCCccCceeEEEEEEe
Confidence 4566665666666665531 488999999999999999998876533111 01256899999999863
Q ss_pred ---------CCCeEEEee-----cCCcccceEEeccc----ceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhc-CCCCCC
Q psy1119 507 ---------SGKRVMGLT-----SGRSLANCCETDVE----MAWEIPDQWTLEDAATVPCVYATAVYAMFICG-QMQKGE 567 (1392)
Q Consensus 507 ---------vGdrV~gl~-----~~g~~a~~v~~~~~----~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a-~l~~Ge 567 (1392)
+||+|+++. ..|+|++|+.++.. .++++|++++++++|.+++++.|||+++...+ ++++|+
T Consensus 74 G~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~ 153 (352)
T cd08247 74 GSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDS 153 (352)
T ss_pred CcccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCC
Confidence 577888775 25899999999998 78999999999999999999999999998887 899999
Q ss_pred EEEEEcCCchHHHHHHHHHHHcC-C-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCcc---HHHHHHHHcC-CCcceE
Q psy1119 568 SILIHAGSGGVGQAAINLARYMD-A-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTS---FEQLVMKRTK-GRGVDL 641 (1392)
Q Consensus 568 tVLI~ga~GgVG~aaIqlA~~~G-a-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~---~~~~i~~~T~-g~GvDv 641 (1392)
+|+||||+|++|++++|+|+++| + .|+++. ++++++++++ ++.+++++..+.+ +...+.+.+. ++|+|+
T Consensus 154 ~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~ 228 (352)
T cd08247 154 KVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKK----LGADHFIDYDAHSGVKLLKPVLENVKGQGKFDL 228 (352)
T ss_pred eEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHH----hCCCEEEecCCCcccchHHHHHHhhcCCCCceE
Confidence 99999999999999999999974 4 566665 4555666643 5678899877665 5555555544 789999
Q ss_pred EEecCch-hHHHHHHhccc---CCeEEEEEccccccc-C---------ccccccccCCCcEEEEEechhhhhhCHHHHHH
Q psy1119 642 VLNSLAE-EKLQASVRCLA---QGGRFLEIGKFDLAN-N---------NMLGMEVFMRETSFHGVMLDNFFFAEQEWKMS 707 (1392)
Q Consensus 642 Vlds~~~-~~l~~s~~~La---~~Gr~v~iG~~~~~~-~---------~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~ 707 (1392)
+||+.++ .....+++|++ ++|+++.++...... . .......+.++.++..+.+.... ..+. ..
T Consensus 229 vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~ 305 (352)
T cd08247 229 ILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFL-LDPN--AD 305 (352)
T ss_pred EEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEE-ecCC--HH
Confidence 9999987 57788999999 999999875221110 0 00111223334433333222111 1111 23
Q ss_pred HHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 708 LQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 708 ~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
....+.+++.+|.+++.+.++|+++++++||+.+.++++.||+|+++
T Consensus 306 ~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 306 WIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred HHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 44556678888999888889999999999999999999999998853
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi |
| >cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-26 Score=278.01 Aligned_cols=293 Identities=21% Similarity=0.300 Sum_probs=223.8
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChh-hhhhhccccccccceeeEEEEe--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPE-VIESRRLYQHCVIGFEYSGRLR-------- 505 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~-~~~~~~~~~p~~lG~E~sGvV~-------- 505 (1392)
.+.|.+.|.|. +.+++++|+|.++|+|++|+.+..|..... .++ .....|.++|||++|+|.
T Consensus 38 ~~~~~~~~~p~--------~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~-~~~~~~~~~g~e~~G~V~~vG~~v~~ 108 (384)
T cd08265 38 ELRVEDVPVPN--------LKPDEILIRVKACGICGSDIHLYETDKDGYILYP-GLTEFPVVIGHEFSGVVEKTGKNVKN 108 (384)
T ss_pred CEEEEECCCCC--------CCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccC-cccCCCcccccceEEEEEEECCCCCC
Confidence 48888988875 689999999999999999999886421100 000 001236789999999987
Q ss_pred -eCCCeEEE---------------------------eecCCcccceEEecccceEEcCCCC-------CHhhHhhhhHHH
Q psy1119 506 -DSGKRVMG---------------------------LTSGRSLANCCETDVEMAWEIPDQW-------TLEDAATVPCVY 550 (1392)
Q Consensus 506 -~vGdrV~g---------------------------l~~~g~~a~~v~~~~~~~~~iPd~l-------s~e~AA~lp~~~ 550 (1392)
++||+|++ +...|+|++|+.+++..++++|+++ +++ +|+++.++
T Consensus 109 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~ 187 (384)
T cd08265 109 FEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPT 187 (384)
T ss_pred CCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHH
Confidence 36888874 4446899999999999999999864 555 66677899
Q ss_pred HHHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCc---c
Q psy1119 551 ATAVYAMFIC-GQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDT---S 625 (1392)
Q Consensus 551 ~TA~~aL~~~-a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~---~ 625 (1392)
+|||+++... +++++|++|||| |+|++|++++|+|+.+|+ +|++++++++|.+.+++ ++.+++++.++. +
T Consensus 188 ~ta~~al~~~~~~~~~g~~VlV~-g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~v~~~~~~~~~ 262 (384)
T cd08265 188 SVAYNGLFIRGGGFRPGAYVVVY-GAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKE----MGADYVFNPTKMRDCL 262 (384)
T ss_pred HHHHHHHHhhcCCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCCEEEccccccccc
Confidence 9999999766 789999999999 679999999999999999 79999888887766665 567888887754 7
Q ss_pred HHHHHHHHcCCCcceEEEecCch--hHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHH
Q psy1119 626 FEQLVMKRTKGRGVDLVLNSLAE--EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQE 703 (1392)
Q Consensus 626 ~~~~i~~~T~g~GvDvVlds~~~--~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~ 703 (1392)
+.+.+++.++++|+|+|+|+.++ ..+..++++|+++||++.+|....... ........+..++.+.....
T Consensus 263 ~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~l~~~~~~~------- 334 (384)
T cd08265 263 SGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVP-LHLEVLQVRRAQIVGAQGHS------- 334 (384)
T ss_pred HHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCc-ccHHHHhhCceEEEEeeccC-------
Confidence 88899999999999999999875 367899999999999999986532111 11112233455566543211
Q ss_pred HHHHHHHHHHHHHHcCCCCCc--ceeeeccccHHHHHHHHHcCCccceEEE
Q psy1119 704 WKMSLQKALQKAIDAGAVQPL--VRTIFPEDKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 704 ~~~~~~~~~~~~l~~g~l~pl--~~~vf~l~ev~eA~~~l~~g~~~GKvVI 752 (1392)
....+..+.+++.+|.+++. +.++|+++++.+||+.+.++ ..||+|+
T Consensus 335 -~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 335 -GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred -CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 01223445577888988873 67889999999999997665 6789875
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi |
| >cd05285 sorbitol_DH Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-26 Score=273.18 Aligned_cols=287 Identities=22% Similarity=0.336 Sum_probs=226.2
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcC-CCChhhhhhhccccccccceeeEEEEee------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTA-KLAPEVIESRRLYQHCVIGFEYSGRLRD------ 506 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G-~~~~~~~~~~~~~~p~~lG~E~sGvV~~------ 506 (1392)
..+.|.+.|.|. +.+++|+|+|.++|+|+.|+....+ ..+... ...|.++|+|++|+|++
T Consensus 8 ~~~~~~~~~~~~--------l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~-----~~~~~~~g~e~~G~V~~vG~~v~ 74 (343)
T cd05285 8 GDLRLEERPIPE--------PGPGEVLVRVRAVGICGSDVHYYKHGRIGDFV-----VKEPMVLGHESAGTVVAVGSGVT 74 (343)
T ss_pred CceeEEECCCCC--------CCCCeEEEEEEEeeEccccHHHHccCCCcccC-----CCCCcccCcceeEEEEeeCCCCC
Confidence 467888887765 6889999999999999999987642 221110 01256899999999873
Q ss_pred ---CCCeEEE------------------------ee----cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHH
Q psy1119 507 ---SGKRVMG------------------------LT----SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVY 555 (1392)
Q Consensus 507 ---vGdrV~g------------------------l~----~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~ 555 (1392)
+||+|++ +. ..|+|++|+.+++..++++|+++++++||.+ .++++|++
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~ 153 (343)
T cd05285 75 HLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVH 153 (343)
T ss_pred CCCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHH
Confidence 5788875 21 2488999999999999999999999999887 58899999
Q ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCCCcCceeeCCCccH---HHHHH
Q psy1119 556 AMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSF---EQLVM 631 (1392)
Q Consensus 556 aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~---~~~i~ 631 (1392)
++ ..+++++|++|||+| +|++|++++|+|+.+|++ |+++++++++.+++++ ++.+++++.++.++ .+.++
T Consensus 154 ~~-~~~~~~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~ 227 (343)
T cd05285 154 AC-RRAGVRPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKE----LGATHTVNVRTEDTPESAEKIA 227 (343)
T ss_pred HH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----cCCcEEeccccccchhHHHHHH
Confidence 97 889999999999985 699999999999999998 8899989999998865 57889999887775 88888
Q ss_pred HHcCCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhhhhhCHHHHHHHH
Q psy1119 632 KRTKGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFFAEQEWKMSLQ 709 (1392)
Q Consensus 632 ~~T~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~~~~~~~~~~~ 709 (1392)
+.++++++|+|||+.++. .++.++++++++|+++.+|..+.. ..+.+ ....+++++.+..... ...
T Consensus 228 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~----------~~~ 295 (343)
T cd05285 228 ELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE--VTLPLSAASLREIDIRGVFRYA----------NTY 295 (343)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC--CccCHHHHhhCCcEEEEeccCh----------HHH
Confidence 889888999999999875 788999999999999999854322 11111 2334556666543211 233
Q ss_pred HHHHHHHHcCCCC--CcceeeeccccHHHHHHHHHcCC-ccceEEE
Q psy1119 710 KALQKAIDAGAVQ--PLVRTIFPEDKVEEAFRYMAAGK-HIGKVII 752 (1392)
Q Consensus 710 ~~~~~~l~~g~l~--pl~~~vf~l~ev~eA~~~l~~g~-~~GKvVI 752 (1392)
..+.+++.++.+. +.+.++|+++++.+||+.+.+++ ..+||+|
T Consensus 296 ~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 296 PTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred HHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 4455677888765 45678899999999999998884 4589987
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.6e-28 Score=269.96 Aligned_cols=214 Identities=24% Similarity=0.359 Sum_probs=161.2
Q ss_pred ceeEeecCCCccccccHHHHhhcCCc-eEEEecC------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHH
Q psy1119 1158 NTIFMVPGIEGIATVLEPLAKNINAQ-VLVFQFD------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGM 1230 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~~y~~La~~L~~~-~~v~~l~------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~ 1230 (1392)
+|||||||+||++.+|.+|++.|+.+ +.+++++ .+++..|+++||+.|+++|++.+ |+|||+|+||||||+
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~~--~~gp~~L~G~S~Gg~ 78 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRARQ--PEGPYVLAGWSFGGI 78 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHHT--SSSSEEEEEETHHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhhC--CCCCeeehccCccHH
Confidence 48999999999999999999999997 8888887 24567899999999999999654 899999999999999
Q ss_pred HHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccC-CCCChHHHHHHHHhcC--CccccCCHHHHHHHHHHHHHHHHhhcc
Q psy1119 1231 VALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLR-KLPDWNAKLNYFLDLM--PEDATHSRTYQRNLAHAAYKRITSILK 1306 (1392)
Q Consensus 1231 VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~-~~~~~~~~l~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1306 (1392)
||||||++|+++|.++ .|+|+|++||....... .....+..++.+.+.. +.....+.+.+..++..++.+..+..+
T Consensus 79 lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (229)
T PF00975_consen 79 LAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEELLARLLRALRDDFQALEN 158 (229)
T ss_dssp HHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999988 88999998775411111 0111111222232221 222334556788889999999999999
Q ss_pred ccCCCCCcccceEEEEeeCCCC-CCCh---hhcCcccccCCCeEEEEEccCccccccChHHHHHHHhhhccc
Q psy1119 1307 YTDPKHKAFGGNITLLRPTEQA-LPTA---EDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDSTD 1374 (1392)
Q Consensus 1307 y~~~~~~~~~~pi~l~~a~~~~-~~~~---~~~~W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~~~L 1374 (1392)
|.......-..+++++...++. .... ...+|+++|++.++++.++|||++|++ +++..++..|++.|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G~H~~~l~-~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 159 YSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPGDHFSMLK-PHVAEIAEKIAEWL 229 (229)
T ss_dssp CS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESSETTGHHS-TTHHHHHHHHHHHH
T ss_pred ccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcCCCcEecc-hHHHHHHHHHhccC
Confidence 8643222224578888776665 2222 344599999999999999999999999 88888888887543
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-26 Score=272.62 Aligned_cols=290 Identities=20% Similarity=0.275 Sum_probs=232.2
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR--------- 505 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~--------- 505 (1392)
.+.+.+.+.|. +.++||+|+|.++++|+.|+....|.++.. .|.++|+|++|+|.
T Consensus 11 ~l~~~~~~~~~--------l~~~~v~v~v~~~~~n~~d~~~~~~~~~~~--------~~~~~g~~~~G~V~~~g~~v~~~ 74 (343)
T cd08236 11 DLRYEDIPKPE--------PGPGEVLVKVKACGICGSDIPRYLGTGAYH--------PPLVLGHEFSGTVEEVGSGVDDL 74 (343)
T ss_pred ceeEEecCCCC--------CCCCeEEEEEEEEEECccchHhhcCCCCCC--------CCcccCcceEEEEEEECCCCCcC
Confidence 47788887764 689999999999999999999888765221 25689999999986
Q ss_pred eCCCeEEEee---------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHH
Q psy1119 506 DSGKRVMGLT---------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMF 558 (1392)
Q Consensus 506 ~vGdrV~gl~---------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~ 558 (1392)
++||+|+++. ..|+|++|+.+++..++++|+++++++||++ .+++|||+++.
T Consensus 75 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~ 153 (343)
T cd08236 75 AVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR 153 (343)
T ss_pred CCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH
Confidence 3689998862 3489999999999999999999999999988 58899999995
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCC
Q psy1119 559 ICGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGR 637 (1392)
Q Consensus 559 ~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~ 637 (1392)
.+++++|++||||| +|++|++++|+|+.+|++ |+++++++++++++++ ++.+++++.++.+ .+.+++.++++
T Consensus 154 -~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~----~g~~~~~~~~~~~-~~~~~~~~~~~ 226 (343)
T cd08236 154 -LAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARE----LGADDTINPKEED-VEKVRELTEGR 226 (343)
T ss_pred -hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCCEEecCcccc-HHHHHHHhCCC
Confidence 78899999999995 699999999999999997 9999999999998864 5668899988877 77888888888
Q ss_pred cceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccC-cccc-ccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHH
Q psy1119 638 GVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANN-NMLG-MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQK 714 (1392)
Q Consensus 638 GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~-~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~ 714 (1392)
++|++||+.++ ..+..+++||+++|+++.+|....... .... ..++.+++++.++...... + ......+.+.+
T Consensus 227 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~ 302 (343)
T cd08236 227 GADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSA---P-FPGDEWRTALD 302 (343)
T ss_pred CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccc---c-cchhhHHHHHH
Confidence 99999999864 578899999999999999996531100 1111 1234678888887653211 1 11223445567
Q ss_pred HHHcCCCC--CcceeeeccccHHHHHHHHHc-CCccceEEE
Q psy1119 715 AIDAGAVQ--PLVRTIFPEDKVEEAFRYMAA-GKHIGKVII 752 (1392)
Q Consensus 715 ~l~~g~l~--pl~~~vf~l~ev~eA~~~l~~-g~~~GKvVI 752 (1392)
++.+|.+. +.+.++|++++++++++.+.+ +...||+|+
T Consensus 303 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 303 LLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred HHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 78888876 456788999999999999998 667888874
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast |
| >COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-26 Score=269.78 Aligned_cols=281 Identities=20% Similarity=0.299 Sum_probs=216.1
Q ss_pred CCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhcccccc-ccceeeEEEEeeC--------CCeEEEe----------
Q psy1119 454 DNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHC-VIGFEYSGRLRDS--------GKRVMGL---------- 514 (1392)
Q Consensus 454 ~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~-~lG~E~sGvV~~v--------GdrV~gl---------- 514 (1392)
+.+++|+|||.++|||.+|++.+.|..+.... +. ++|||++|+|+++ ||||..-
T Consensus 23 ~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~-------~~~i~GHE~~G~V~evG~~~~~~~GdrVvv~~~~~Cg~C~~ 95 (350)
T COG1063 23 PGPGDVLIRVTATGICGSDLHIYRGGEPFVPP-------GDIILGHEFVGEVVEVGVVRGFKVGDRVVVEPNIPCGHCRY 95 (350)
T ss_pred CCCCeEEEEEEEEeEchhhhhhccCCCCCCCC-------CCcccCccceEEEEEeccccCCCCCCEEEECCCcCCCCChh
Confidence 58899999999999999999999997654311 22 8999999988755 5777321
Q ss_pred -----------------e-----cCCcccceEEecccceEE-cCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEE
Q psy1119 515 -----------------T-----SGRSLANCCETDVEMAWE-IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILI 571 (1392)
Q Consensus 515 -----------------~-----~~g~~a~~v~~~~~~~~~-iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI 571 (1392)
. .+|+|+||+.+|.+++++ +||++++++||.. .+++|+|++.......+++++|+|
T Consensus 96 C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~-epla~~~~~~a~~~~~~~~~~V~V 174 (350)
T COG1063 96 CRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALT-EPLATAYHGHAERAAVRPGGTVVV 174 (350)
T ss_pred HhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhc-ChhhhhhhhhhhccCCCCCCEEEE
Confidence 0 137999999999755554 5888865555555 599999888555666677779999
Q ss_pred EcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCch-h
Q psy1119 572 HAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE-E 649 (1392)
Q Consensus 572 ~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~-~ 649 (1392)
. |+|+||++++++|+..|+ +|+++..+++|++++++. .+++.+++....+....+++.|+|+|+|++|+|+|. .
T Consensus 175 ~-GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~---~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G~~~ 250 (350)
T COG1063 175 V-GAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEA---GGADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPP 250 (350)
T ss_pred E-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHh---CCCeEeecCccccHHHHHHHHhCCCCCCEEEECCCCHH
Confidence 9 559999999999999998 567777889999998873 567777777666778889999999999999999985 4
Q ss_pred HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCC--ccee
Q psy1119 650 KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRT 727 (1392)
Q Consensus 650 ~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~ 727 (1392)
.+.+++++++++|+++.+|..............+.|++++.|..... .. .....+.+++.+|++.+ ++++
T Consensus 251 ~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~----~~----~~~~~~~~ll~~g~i~~~~lit~ 322 (350)
T COG1063 251 ALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPS----GR----EDFERALDLLASGKIDPEKLITH 322 (350)
T ss_pred HHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCC----Cc----ccHHHHHHHHHcCCCChhHceEe
Confidence 68999999999999999997643322222346778999999973211 01 11233456788999887 4688
Q ss_pred eeccccHHHHHHHHHcCCc-cceEEEEe
Q psy1119 728 IFPEDKVEEAFRYMAAGKH-IGKVIIKI 754 (1392)
Q Consensus 728 vf~l~ev~eA~~~l~~g~~-~GKvVI~~ 754 (1392)
.++++++++||+.+.+.+. .-|+++.+
T Consensus 323 ~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 323 RLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred eccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 9999999999999988654 45888753
|
|
| >cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-26 Score=274.34 Aligned_cols=288 Identities=19% Similarity=0.248 Sum_probs=224.9
Q ss_pred CCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee------
Q psy1119 433 MSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD------ 506 (1392)
Q Consensus 433 l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~------ 506 (1392)
+..+++.+.|.|.. +.++|++|+|.++|+|+.|++...|.++.. .|+++|||++|+|.+
T Consensus 9 ~~~~~~~~~~~p~~-------~~~~evlv~v~a~~i~~~D~~~~~g~~~~~--------~p~~~g~e~~G~V~~vG~~v~ 73 (375)
T cd08282 9 PGNVAVEDVPDPKI-------EHPTDAIVRITTTAICGSDLHMYRGRTGAE--------PGLVLGHEAMGEVEEVGSAVE 73 (375)
T ss_pred CCceeEEeCCCCCC-------CCCCeEEEEEEEEeeCHHHHHHHcCCCCCC--------CCceeccccEEEEEEeCCCCC
Confidence 34688888888751 368999999999999999999999876521 367899999999873
Q ss_pred ---CCCeEEEe-------e------------------------------cCCcccceEEeccc--ceEEcCCCCCHh---
Q psy1119 507 ---SGKRVMGL-------T------------------------------SGRSLANCCETDVE--MAWEIPDQWTLE--- 541 (1392)
Q Consensus 507 ---vGdrV~gl-------~------------------------------~~g~~a~~v~~~~~--~~~~iPd~ls~e--- 541 (1392)
+||+|.+. . ..|+|++|+.++.. .++++|++++++
T Consensus 74 ~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~ 153 (375)
T cd08282 74 SLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKD 153 (375)
T ss_pred cCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhh
Confidence 67888651 1 13789999999976 899999999999
Q ss_pred hHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceee
Q psy1119 542 DAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGN 620 (1392)
Q Consensus 542 ~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~ 620 (1392)
++|.++++++|||+++ ..+++++|++|||+ |+|++|++++|+|+++|+ +|+++..+++|.+.+++ +++ ..++
T Consensus 154 ~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~-g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~----~g~-~~v~ 226 (375)
T cd08282 154 DYLMLSDIFPTGWHGL-ELAGVQPGDTVAVF-GAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAES----IGA-IPID 226 (375)
T ss_pred heeeecchHHHHHHHH-HhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCC-eEec
Confidence 5688888999999998 78899999999997 569999999999999998 79898888888888775 565 4567
Q ss_pred CCCccHHHHHHHHcCCCcceEEEecCchh------------HHHHHHhcccCCeEEEEEcccccccCcc-----------
Q psy1119 621 SRDTSFEQLVMKRTKGRGVDLVLNSLAEE------------KLQASVRCLAQGGRFLEIGKFDLANNNM----------- 677 (1392)
Q Consensus 621 s~~~~~~~~i~~~T~g~GvDvVlds~~~~------------~l~~s~~~La~~Gr~v~iG~~~~~~~~~----------- 677 (1392)
.++.++.+.+++.++ +++|+++|+++++ .+..++++++++|+++.+|.........
T Consensus 227 ~~~~~~~~~i~~~~~-~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~ 305 (375)
T cd08282 227 FSDGDPVEQILGLEP-GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELS 305 (375)
T ss_pred cCcccHHHHHHHhhC-CCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCcccc
Confidence 777788888888887 6899999998865 3788999999999999887542111100
Q ss_pred cc-ccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 678 LG-MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 678 l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
+. ..++.++..+.+.... .......+.+++.++.+++ ++.++|+++++++||+.+.+++ .+|+|++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~ 374 (375)
T cd08282 306 FDFGLLWAKGLSFGTGQAP---------VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIK 374 (375)
T ss_pred ccHHHHHhcCcEEEEecCC---------chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 01 1122344444432110 1233445557788999987 3789999999999999999998 9999875
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo |
| >cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-25 Score=262.74 Aligned_cols=291 Identities=24% Similarity=0.377 Sum_probs=237.3
Q ss_pred ccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--
Q psy1119 428 LVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-- 505 (1392)
Q Consensus 428 ~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-- 505 (1392)
..+|.++.+.|.+.+.|. +++++|+|+|.++|+|+.|+....|.+... .....|..+|+|++|+|.
T Consensus 7 ~~~~~~~~~~~~~~~~~~--------~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~----~~~~~~~~~g~e~~G~v~~~ 74 (309)
T cd05289 7 HEYGGPEVLELADVPTPE--------PGPGEVLVKVHAAGVNPVDLKIREGLLKAA----FPLTLPLIPGHDVAGVVVAV 74 (309)
T ss_pred cccCCccceeecccCCCC--------CCCCeEEEEEEEeeCCHHHHHHhcCCcccc----CCCCCCCccccceeEEEEee
Confidence 456666777887777653 689999999999999999999988865311 011236789999999986
Q ss_pred -------eCCCeEEEee---cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCC
Q psy1119 506 -------DSGKRVMGLT---SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGS 575 (1392)
Q Consensus 506 -------~vGdrV~gl~---~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~ 575 (1392)
++|++|+++. ..|++++|+.++...++++|+++++++++.+++.+.+||+++...+++.+|++|+|||++
T Consensus 75 G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~ 154 (309)
T cd05289 75 GPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAA 154 (309)
T ss_pred CCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCC
Confidence 3688888875 148999999999999999999999999999999999999999888889999999999999
Q ss_pred chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHH
Q psy1119 576 GGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASV 655 (1392)
Q Consensus 576 GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~ 655 (1392)
|++|++++++|+..|++|++++.++ +.+++++ ++.+++++.++.++.+ .+.++++|+++|+.++.....++
T Consensus 155 g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~~----~g~~~~~~~~~~~~~~----~~~~~~~d~v~~~~~~~~~~~~~ 225 (309)
T cd05289 155 GGVGSFAVQLAKARGARVIATASAA-NADFLRS----LGADEVIDYTKGDFER----AAAPGGVDAVLDTVGGETLARSL 225 (309)
T ss_pred chHHHHHHHHHHHcCCEEEEEecch-hHHHHHH----cCCCEEEeCCCCchhh----ccCCCCceEEEECCchHHHHHHH
Confidence 9999999999999999999998877 7777754 4567888888777654 46667899999999988889999
Q ss_pred hcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHH
Q psy1119 656 RCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVE 735 (1392)
Q Consensus 656 ~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~ 735 (1392)
++++++|+++.+|..+.... ..+.+++++....+.. . ...+..+..+++++.+.+.+++.|++++++
T Consensus 226 ~~l~~~g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (309)
T cd05289 226 ALVKPGGRLVSIAGPPPAEQ-----AAKRRGVRAGFVFVEP------D--GEQLAELAELVEAGKLRPVVDRVFPLEDAA 292 (309)
T ss_pred HHHhcCcEEEEEcCCCcchh-----hhhhccceEEEEEecc------c--HHHHHHHHHHHHCCCEEEeeccEEcHHHHH
Confidence 99999999999986533111 3456677777765421 1 334455667788888888888999999999
Q ss_pred HHHHHHHcCCccceEEE
Q psy1119 736 EAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 736 eA~~~l~~g~~~GKvVI 752 (1392)
+||+.+..++..||+|+
T Consensus 293 ~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 293 EAHERLESGHARGKVVL 309 (309)
T ss_pred HHHHHHHhCCCCCcEeC
Confidence 99999999988888764
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et |
| >cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.8e-26 Score=264.80 Aligned_cols=296 Identities=20% Similarity=0.325 Sum_probs=227.2
Q ss_pred cCCCCCCc--eEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee
Q psy1119 429 VRGDMSSL--TWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD 506 (1392)
Q Consensus 429 ~~G~l~~l--~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~ 506 (1392)
..|++..+ .+.+.|.|. +.+++|+|++.++|+|+.|+....|.++... ....+..+|+|++|+|.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~--------~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~----~~~~~~~~g~e~~G~v~~ 72 (319)
T cd08267 5 RYGSPEVLLLLEVEVPIPT--------PKPGEVLVKVHAASVNPVDWKLRRGPPKLLL----GRPFPPIPGMDFAGEVVA 72 (319)
T ss_pred CCCChhhhhhccccCCCCC--------CCCCEEEEEEEEeeCCHHHHHHHcCCCcccc----cCCCCCcccceeeEEEEE
Confidence 45565554 677777654 6899999999999999999999888653210 011256899999999863
Q ss_pred ---------CCCeEEEeec---CCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcC
Q psy1119 507 ---------SGKRVMGLTS---GRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAG 574 (1392)
Q Consensus 507 ---------vGdrV~gl~~---~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga 574 (1392)
+||+|+++.. .|++++|+.++.+.++++|+++++++++.+++++++||+++...+++++|++|+|||+
T Consensus 73 ~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~ 152 (319)
T cd08267 73 VGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGA 152 (319)
T ss_pred eCCCCCCCCCCCEEEEeccCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 6889988753 4889999999999999999999999999999999999999988888999999999999
Q ss_pred CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchh--HHH
Q psy1119 575 SGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEE--KLQ 652 (1392)
Q Consensus 575 ~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~--~l~ 652 (1392)
+|++|++++++|+.+|++|++++++ ++++++++ ++.+++++.+..++. +..+.++++|+|+|+.++. ...
T Consensus 153 ~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~~----~g~~~~~~~~~~~~~---~~~~~~~~~d~vi~~~~~~~~~~~ 224 (319)
T cd08267 153 SGGVGTFAVQIAKALGAHVTGVCST-RNAELVRS----LGADEVIDYTTEDFV---ALTAGGEKYDVIFDAVGNSPFSLY 224 (319)
T ss_pred CcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHHH----cCCCEeecCCCCCcc---hhccCCCCCcEEEECCCchHHHHH
Confidence 9999999999999999999998865 88888854 456788887766654 5567778999999998853 333
Q ss_pred HHHhcccCCeEEEEEcccccccCccc---cccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeee
Q psy1119 653 ASVRCLAQGGRFLEIGKFDLANNNML---GMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIF 729 (1392)
Q Consensus 653 ~s~~~La~~Gr~v~iG~~~~~~~~~l---~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf 729 (1392)
..+..++++|+++.+|..+....... .+........+...... .. ......+.+++.++.+.+++.++|
T Consensus 225 ~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~~~~~~~~l~~~~~~~~~~~~~ 296 (319)
T cd08267 225 RASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAK----PN----AEDLEQLAELVEEGKLKPVIDSVY 296 (319)
T ss_pred HhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEEec----CC----HHHHHHHHHHHHCCCeeeeeeeEE
Confidence 44445999999999997643322211 11111222223322211 01 234455567788898888888999
Q ss_pred ccccHHHHHHHHHcCCccceEEE
Q psy1119 730 PEDKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 730 ~l~ev~eA~~~l~~g~~~GKvVI 752 (1392)
+++++++||+.+.+++..||+++
T Consensus 297 ~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 297 PLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred cHHHHHHHHHHHhcCCCCCcEeC
Confidence 99999999999999888888874
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >TIGR00692 tdh L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.6e-26 Score=268.17 Aligned_cols=290 Identities=21% Similarity=0.288 Sum_probs=223.9
Q ss_pred ceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee---------
Q psy1119 436 LTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD--------- 506 (1392)
Q Consensus 436 l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~--------- 506 (1392)
+++.+.|.|. ++++|++|+|.++++|+.|+.+..|..... .....|.++|+|++|+|.+
T Consensus 11 ~~l~~~~~p~--------~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~----~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 78 (340)
T TIGR00692 11 AELTEVPVPE--------PGPGEVLIKVLATSICGTDVHIYNWDEWAQ----SRIKPPQVVGHEVAGEVVGIGPGVEGIK 78 (340)
T ss_pred cEEEECCCCC--------CCCCeEEEEEEEEEEcccCHHHHcCCCCCC----CCCCCCcccccceEEEEEEECCCCCcCC
Confidence 6777877765 688999999999999999998876542111 0112355799999999873
Q ss_pred CCCeEEE---------------------------eecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHH
Q psy1119 507 SGKRVMG---------------------------LTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFI 559 (1392)
Q Consensus 507 vGdrV~g---------------------------l~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~ 559 (1392)
+||+|.+ +...|++++|+.+++..++++|+++++++| +++.++.+|++++
T Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~-- 155 (340)
T TIGR00692 79 VGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV-- 155 (340)
T ss_pred CCCEEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--
Confidence 5788876 223588999999999999999999999654 5778999999987
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCc
Q psy1119 560 CGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRG 638 (1392)
Q Consensus 560 ~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~G 638 (1392)
.+++++|++|+|+| +|++|++++|+|+.+|++ |++|.++++|.+.+++ ++.+++++.+..++.+.+.+.++++|
T Consensus 156 ~~~~~~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~----~g~~~~v~~~~~~~~~~l~~~~~~~~ 230 (340)
T TIGR00692 156 LAGPISGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKK----MGATYVVNPFKEDVVKEVADLTDGEG 230 (340)
T ss_pred HccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----hCCcEEEcccccCHHHHHHHhcCCCC
Confidence 45678999999974 699999999999999997 8888777777777765 56688899888889999999888899
Q ss_pred ceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHH
Q psy1119 639 VDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAID 717 (1392)
Q Consensus 639 vDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~ 717 (1392)
+|++||+.++ ..+...+++++++|+++.+|..............+.+++++.+..... . ......+.++++
T Consensus 231 ~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~l~ 302 (340)
T TIGR00692 231 VDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRH----M----FETWYTVSRLIQ 302 (340)
T ss_pred CCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCC----c----hhhHHHHHHHHH
Confidence 9999999764 678889999999999999986521111111213344566666543111 1 122345567888
Q ss_pred cCCCC--CcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 718 AGAVQ--PLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 718 ~g~l~--pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+|.++ +++.+.|+++++.+||+.+.+++ .||+|+++
T Consensus 303 ~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~gkvvv~~ 340 (340)
T TIGR00692 303 SGKLDLDPIITHKFKFDKFEKGFELMRSGQ-TGKVILSL 340 (340)
T ss_pred cCCCChHHheeeeeeHHHHHHHHHHHhcCC-CceEEEeC
Confidence 89887 45789999999999999999887 49999865
|
E. coli His-90 modulates substrate specificity and is believed part of the active site. |
| >cd08234 threonine_DH_like L-threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-25 Score=264.35 Aligned_cols=282 Identities=21% Similarity=0.307 Sum_probs=226.0
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~-------- 506 (1392)
.+.+.+.+.|. +.+++|+|+|.|+++|+.|+....|.++.. .|.++|+|++|+|++
T Consensus 11 ~~~~~~~~~~~--------l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~--------~p~~~g~~~~G~v~~vG~~v~~~ 74 (334)
T cd08234 11 ELEVEEVPVPE--------PGPDEVLIKVAACGICGTDLHIYEGEFGAA--------PPLVPGHEFAGVVVAVGSKVTGF 74 (334)
T ss_pred ceEEEeccCCC--------CCCCeEEEEEEEEeEchhhhHHhcCCCCCC--------CCcccccceEEEEEEeCCCCCCC
Confidence 57777777765 689999999999999999999999876532 256899999999873
Q ss_pred -CCCeEEE-------------------------e--ecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHH
Q psy1119 507 -SGKRVMG-------------------------L--TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMF 558 (1392)
Q Consensus 507 -vGdrV~g-------------------------l--~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~ 558 (1392)
+||+|++ + ...|++++|+.++++.++++|+++++.+||.+ ++++++++++
T Consensus 75 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l- 152 (334)
T cd08234 75 KVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL- 152 (334)
T ss_pred CCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-
Confidence 5778865 1 13588999999999999999999999999876 7889999998
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCC
Q psy1119 559 ICGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGR 637 (1392)
Q Consensus 559 ~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~ 637 (1392)
..+++++|++||||| +|++|++++|+|+..|++ |+++.+++++.+++++ ++.+++++..+.++... +.+.++
T Consensus 153 ~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~--~~~~~~ 225 (334)
T cd08234 153 DLLGIKPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKK----LGATETVDPSREDPEAQ--KEDNPY 225 (334)
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----hCCeEEecCCCCCHHHH--HHhcCC
Confidence 788999999999995 699999999999999998 8888889999998865 45668888877776655 456678
Q ss_pred cceEEEecCc-hhHHHHHHhcccCCeEEEEEcccccccC-ccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHH
Q psy1119 638 GVDLVLNSLA-EEKLQASVRCLAQGGRFLEIGKFDLANN-NMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKA 715 (1392)
Q Consensus 638 GvDvVlds~~-~~~l~~s~~~La~~Gr~v~iG~~~~~~~-~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~ 715 (1392)
++|++||+.+ ...+..++++++++|+++.+|..+.... .......+.+++++.+..... ...+.+.++
T Consensus 226 ~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 295 (334)
T cd08234 226 GFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINP----------YTFPRAIAL 295 (334)
T ss_pred CCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCH----------HHHHHHHHH
Confidence 9999999986 4678899999999999999986543111 111112233678887764321 224455577
Q ss_pred HHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEE
Q psy1119 716 IDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 716 l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI 752 (1392)
++++.+++ .+..+|+++++.+|++.+.+ ...||+|+
T Consensus 296 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 296 LESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 88888875 36788999999999999998 78899876
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=264.74 Aligned_cols=280 Identities=21% Similarity=0.319 Sum_probs=215.9
Q ss_pred cCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---
Q psy1119 429 VRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR--- 505 (1392)
Q Consensus 429 ~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~--- 505 (1392)
.+| .+.++|.+.+.+. +.+++|+|+|.++|+|++|+....+.. .. ..|.++|||++|+|+
T Consensus 8 ~~~-~~~~~~~~~~~~~--------~~~~ev~v~v~~~~i~~~d~~~~~~~~-~~-------~~~~~~g~e~~G~v~~vG 70 (325)
T cd08264 8 KSG-IENLKVEDVKDPK--------PGPGEVLIRVKMAGVNPVDYNVINAVK-VK-------PMPHIPGAEFAGVVEEVG 70 (325)
T ss_pred cCC-CCceEEEeccCCC--------CCCCeEEEEEEEEEechHHHHHHhCCC-CC-------CCCeecccceeEEEEEEC
Confidence 456 6778888887763 689999999999999999999876522 11 125689999999987
Q ss_pred ------eCCCeEEEee---------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHH
Q psy1119 506 ------DSGKRVMGLT---------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYAT 552 (1392)
Q Consensus 506 ------~vGdrV~gl~---------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~T 552 (1392)
++||+|+.+. ..|+|++|+.+++..++++|+++++++++.+++++.|
T Consensus 71 ~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~ 150 (325)
T cd08264 71 DHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALT 150 (325)
T ss_pred CCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHH
Confidence 3688988641 2478999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHH
Q psy1119 553 AVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMK 632 (1392)
Q Consensus 553 A~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~ 632 (1392)
||+++.. +++++|++|+|+|++|++|++++++|+++|++|+++++ .+++++ ++.+++++.++ ..+.+++
T Consensus 151 a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~~----~g~~~~~~~~~--~~~~l~~ 219 (325)
T cd08264 151 AYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLKE----FGADEVVDYDE--VEEKVKE 219 (325)
T ss_pred HHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHHH----hCCCeeecchH--HHHHHHH
Confidence 9999865 89999999999999999999999999999999988863 356644 56688887654 3566777
Q ss_pred HcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhhhhhCHHHHHHHHHH
Q psy1119 633 RTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFFAEQEWKMSLQKA 711 (1392)
Q Consensus 633 ~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~ 711 (1392)
.+ +|+|+|+|+.++..+..++++++++|+|+.+|... .......+ .++.++.++.+.... .++... .
T Consensus 220 ~~--~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----~ 287 (325)
T cd08264 220 IT--KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLT-GGEVKLDLSDLYSKQISIIGSTGG-----TRKELL----E 287 (325)
T ss_pred Hh--CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCC-CCCCccCHHHHhhcCcEEEEccCC-----CHHHHH----H
Confidence 76 58999999998888999999999999999998641 11111121 233455566654221 122222 2
Q ss_pred HHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceE
Q psy1119 712 LQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKV 750 (1392)
Q Consensus 712 ~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKv 750 (1392)
+.+++.. ++..+.++|+++++++||+.+.++++.||+
T Consensus 288 ~~~l~~~--~~~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 288 LVKIAKD--LKVKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred HHHHHHc--CCceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 3344433 445577889999999999999998888876
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo |
| >cd08232 idonate-5-DH L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-25 Score=265.26 Aligned_cols=285 Identities=20% Similarity=0.264 Sum_probs=220.7
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhc-CCCChhhhhhhccccccccceeeEEEEee------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTT-AKLAPEVIESRRLYQHCVIGFEYSGRLRD------ 506 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~-G~~~~~~~~~~~~~~p~~lG~E~sGvV~~------ 506 (1392)
+.+.|.+.|.|. +++++|+|+|.++|+|+.|+.... |.++.. ....|.++|+|++|+|++
T Consensus 7 ~~~~~~~~~~p~--------l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~-----~~~~p~~~g~e~~G~v~~vG~~v~ 73 (339)
T cd08232 7 GDLRVEERPAPE--------PGPGEVRVRVAAGGICGSDLHYYQHGGFGTV-----RLREPMVLGHEVSGVVEAVGPGVT 73 (339)
T ss_pred CceEEEEcCCCC--------CCCCEEEEEEEEEEECcccHHHHcCCCCCcc-----cccCCeecCccceEEEEeeCCCCC
Confidence 578889988875 689999999999999999998763 433110 011256899999999873
Q ss_pred ---CCCeEEEe-------------------------e-------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHH
Q psy1119 507 ---SGKRVMGL-------------------------T-------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYA 551 (1392)
Q Consensus 507 ---vGdrV~gl-------------------------~-------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~ 551 (1392)
+||+|++. . ..|+|++|+.+++..++++|+++++++||. +.+++
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~ 152 (339)
T cd08232 74 GLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLA 152 (339)
T ss_pred cCCCCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHH
Confidence 58888751 1 248899999999999999999999999976 57899
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHH
Q psy1119 552 TAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLV 630 (1392)
Q Consensus 552 TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i 630 (1392)
|||+++...+.+ +|++|||+| +|++|++++|+|+++|+ +|++++.++++.+++++ ++.++++++++.++
T Consensus 153 ~a~~~l~~~~~~-~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~----~g~~~vi~~~~~~~---- 222 (339)
T cd08232 153 VALHAVNRAGDL-AGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVARA----MGADETVNLARDPL---- 222 (339)
T ss_pred HHHHHHHhcCCC-CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----cCCCEEEcCCchhh----
Confidence 999999777777 999999975 69999999999999999 79999988888887665 46688998876553
Q ss_pred HHHc-CCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhhhhhCHHHHHH
Q psy1119 631 MKRT-KGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFFAEQEWKMS 707 (1392)
Q Consensus 631 ~~~T-~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~~~~~~~~~ 707 (1392)
.+.+ ...++|+++|+.++ ..++.++++|+++|+++.+|.... .....+ ..+.+++++.+.... ..
T Consensus 223 ~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~----------~~ 290 (339)
T cd08232 223 AAYAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGG--PVPLPLNALVAKELDLRGSFRF----------DD 290 (339)
T ss_pred hhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC--CccCcHHHHhhcceEEEEEecC----------HH
Confidence 2222 23569999999874 578899999999999999986431 111111 234577777765321 11
Q ss_pred HHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 708 LQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 708 ~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
..+.+.+++.+|.+++ .+.++|+++++++|++.+.++.+.||+|+++
T Consensus 291 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 291 EFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 2344557788888865 3678899999999999999999999999864
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai |
| >cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=263.27 Aligned_cols=282 Identities=24% Similarity=0.318 Sum_probs=225.0
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~-------- 506 (1392)
.+.+.+.|.|. +.+++++|+|.++|+|+.|++...|.++... .|.++|+|++|+|.+
T Consensus 11 ~~~~~~~~~~~--------~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-------~p~~~g~e~~G~v~~~g~~~~~~ 75 (330)
T cd08245 11 PLEPEEVPVPE--------PGPGEVLIKIEACGVCHTDLHAAEGDWGGSK-------YPLVPGHEIVGEVVEVGAGVEGR 75 (330)
T ss_pred CceEEeccCCC--------CCCCeEEEEEEEEeccHHHHHHHcCCCCCCC-------CCcccCccceEEEEEECCCCccc
Confidence 57888888765 6889999999999999999999988764221 256899999999873
Q ss_pred -CCCeEE----------------------------EeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHH
Q psy1119 507 -SGKRVM----------------------------GLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAM 557 (1392)
Q Consensus 507 -vGdrV~----------------------------gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL 557 (1392)
+||+|+ ++...|++++|+.++...++++|+++++++++.+++++.|||+++
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l 155 (330)
T cd08245 76 KVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSAL 155 (330)
T ss_pred ccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHH
Confidence 578886 332358899999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCC
Q psy1119 558 FICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGR 637 (1392)
Q Consensus 558 ~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~ 637 (1392)
.. .++++|++|||+ |+|++|++++++|+..|++|+++++++++.+++++ ++.+++++..+.++... .. +
T Consensus 156 ~~-~~~~~~~~vlI~-g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~----~~-~ 224 (330)
T cd08245 156 RD-AGPRPGERVAVL-GIGGLGHLAVQYARAMGFETVAITRSPDKRELARK----LGADEVVDSGAELDEQA----AA-G 224 (330)
T ss_pred Hh-hCCCCCCEEEEE-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hCCcEEeccCCcchHHh----cc-C
Confidence 55 789999999999 56889999999999999999999999999999965 45778887766554333 23 4
Q ss_pred cceEEEecCc-hhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHH
Q psy1119 638 GVDLVLNSLA-EEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAI 716 (1392)
Q Consensus 638 GvDvVlds~~-~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l 716 (1392)
++|+|+|+++ +.....++++++++|+++.+|..............+.++.++.+..... ....+.+.+++
T Consensus 225 ~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ll 295 (330)
T cd08245 225 GADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG---------RADLQEALDFA 295 (330)
T ss_pred CCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCC---------HHHHHHHHHHH
Confidence 7999999976 5678899999999999999986432211111223456677777765422 12334455677
Q ss_pred HcCCCCCcceeeeccccHHHHHHHHHcCCccceEEE
Q psy1119 717 DAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 717 ~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI 752 (1392)
.+|.+.+ +.++|+++++++||+.+.+++..||+|+
T Consensus 296 ~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 296 AEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 8888876 5688999999999999999999999874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an |
| >PRK05396 tdh L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-25 Score=264.68 Aligned_cols=292 Identities=20% Similarity=0.276 Sum_probs=225.5
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee-------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD------- 506 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~------- 506 (1392)
+.+++.+.|.|. +.+++|+|+|.++|+|+.|+.+..|..... .....|.++|+|++|+|.+
T Consensus 11 ~~~~~~~~~~p~--------~~~~evlV~v~~~~v~~~d~~~~~~~~~~~----~~~~~p~~~g~e~~G~V~~vG~~v~~ 78 (341)
T PRK05396 11 PGLWLTDVPVPE--------PGPNDVLIKVKKTAICGTDVHIYNWDEWAQ----KTIPVPMVVGHEFVGEVVEVGSEVTG 78 (341)
T ss_pred CceEEEECCCCC--------CCCCeEEEEEEEEEEcccchHhhcCCCccc----ccCCCCcccceeeEEEEEEeCCCCCc
Confidence 568888888875 689999999999999999999766531100 0112356899999999873
Q ss_pred --CCCeEEEee---------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHH
Q psy1119 507 --SGKRVMGLT---------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAM 557 (1392)
Q Consensus 507 --vGdrV~gl~---------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL 557 (1392)
+||+|.++. ..|+|++|+.++...++++|+++++++++.+ .+++++++++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~ 157 (341)
T PRK05396 79 FKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTA 157 (341)
T ss_pred CCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHHH
Confidence 577887651 2489999999999999999999999998855 5778888776
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCC
Q psy1119 558 FICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKG 636 (1392)
Q Consensus 558 ~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g 636 (1392)
.. ...+|++|+|+| +|++|++++|+|+++|+ +|+++..+++|.+++++ +++++++++++.++.+.+++.+++
T Consensus 158 ~~--~~~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~ 230 (341)
T PRK05396 158 LS--FDLVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELARK----MGATRAVNVAKEDLRDVMAELGMT 230 (341)
T ss_pred Hc--CCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCCcEEecCccccHHHHHHHhcCC
Confidence 42 356899999985 69999999999999999 58888878888888876 678899999888899999999988
Q ss_pred CcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHH
Q psy1119 637 RGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKA 715 (1392)
Q Consensus 637 ~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~ 715 (1392)
+|+|+|||+.++ ..++.++++++++|+++.+|.......... .....+++++.++..... ......+.++
T Consensus 231 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~--------~~~~~~~~~~ 301 (341)
T PRK05396 231 EGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGREM--------FETWYKMSAL 301 (341)
T ss_pred CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccH-HHHhhcceEEEEEEccCc--------cchHHHHHHH
Confidence 999999998764 578899999999999999986432111111 234456677666532111 1112234456
Q ss_pred HHcC-CCCCcceeeeccccHHHHHHHHHcCCccceEEEEec
Q psy1119 716 IDAG-AVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 716 l~~g-~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
+.++ ++.+.+.++|+++++.+||+.+.+++ .||+|++|+
T Consensus 302 ~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 302 LQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred HHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 7777 45566789999999999999999887 799999873
|
|
| >cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=264.53 Aligned_cols=270 Identities=18% Similarity=0.274 Sum_probs=214.5
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEeeC------C
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDS------G 508 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~v------G 508 (1392)
.+.+.+.|.|. +.+++|+|+|.|+|+|++|++...|.++ .|.++|+|++|+|+++ |
T Consensus 11 ~~~~~~~~~p~--------~~~~~vlV~v~a~~i~~~d~~~~~g~~~----------~~~~~G~e~~G~Vv~~G~~~~~G 72 (319)
T cd08242 11 DLRVEDLPKPE--------PPPGEALVRVLLAGICNTDLEIYKGYYP----------FPGVPGHEFVGIVEEGPEAELVG 72 (319)
T ss_pred cEEEEECCCCC--------CCCCeEEEEEEEEEEccccHHHHcCCCC----------CCCccCceEEEEEEEeCCCCCCC
Confidence 58889988875 6889999999999999999999988764 1568999999999854 4
Q ss_pred CeEEE---------------------------e-ecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHh
Q psy1119 509 KRVMG---------------------------L-TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFIC 560 (1392)
Q Consensus 509 drV~g---------------------------l-~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~ 560 (1392)
|+|.+ + ...|++++|+.++.+.++++|+++++++|+.+ .++++++.+ ...
T Consensus 73 ~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~-~~~ 150 (319)
T cd08242 73 KRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEI-LEQ 150 (319)
T ss_pred CeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHH-HHh
Confidence 55752 2 12588999999999999999999999998874 345555554 478
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcce
Q psy1119 561 GQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVD 640 (1392)
Q Consensus 561 a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvD 640 (1392)
.++++|++||||| +|++|++++|+|+.+|++|+++++++++++++++ ++++.+++.++. +.++++|
T Consensus 151 ~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~---------~~~~~~d 216 (319)
T cd08242 151 VPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALARR----LGVETVLPDEAE---------SEGGGFD 216 (319)
T ss_pred cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH----cCCcEEeCcccc---------ccCCCCC
Confidence 8999999999995 7999999999999999999999999999999986 567777776432 5667899
Q ss_pred EEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHc
Q psy1119 641 LVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDA 718 (1392)
Q Consensus 641 vVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 718 (1392)
+++|+.++ ..+..+++|++++|+++..|..... ....+ ..+.++.++.+..... .+.+.+++.+
T Consensus 217 ~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~------------~~~~~~~~~~ 282 (319)
T cd08242 217 VVVEATGSPSGLELALRLVRPRGTVVLKSTYAGP--ASFDLTKAVVNEITLVGSRCGP------------FAPALRLLRK 282 (319)
T ss_pred EEEECCCChHHHHHHHHHhhcCCEEEEEcccCCC--CccCHHHheecceEEEEEeccc------------HHHHHHHHHc
Confidence 99999976 5788899999999999987653211 12222 3446777787764322 2334467788
Q ss_pred CCC--CCcceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 719 GAV--QPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 719 g~l--~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
|.+ .+++.++|+++++++||+.+..+. .+|+||+
T Consensus 283 ~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~ 318 (319)
T cd08242 283 GLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLR 318 (319)
T ss_pred CCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 888 456789999999999999998665 5899875
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta |
| >cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-25 Score=261.47 Aligned_cols=277 Identities=21% Similarity=0.309 Sum_probs=219.4
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee-------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD------- 506 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~------- 506 (1392)
.+++|.+.+.|. +.+++|+|+|.++|+|+.|++...|.++.. ..|.++|+|++|+|.+
T Consensus 15 ~~~~~~~~~~~~--------~~~~ev~irv~~~~i~~~d~~~~~g~~~~~-------~~~~~~g~e~~G~V~~vG~~v~~ 79 (329)
T cd08298 15 NPLRLTEVPVPE--------PGPGEVLIKVEACGVCRTDLHIVEGDLPPP-------KLPLIPGHEIVGRVEAVGPGVTR 79 (329)
T ss_pred CCceEEeccCCC--------CCCCEEEEEEEEEeccHHHHHHHhCCCCCC-------CCCccccccccEEEEEECCCCCC
Confidence 568888877764 688999999999999999999998876532 1256899999999873
Q ss_pred --CCCeEEEe----------------------------ecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHH
Q psy1119 507 --SGKRVMGL----------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYA 556 (1392)
Q Consensus 507 --vGdrV~gl----------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~a 556 (1392)
+||+|... ...|+|++|+.++...++++|+++++.+++.++++++|||++
T Consensus 80 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~ 159 (329)
T cd08298 80 FSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRA 159 (329)
T ss_pred CcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHH
Confidence 57788651 124789999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCC
Q psy1119 557 MFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKG 636 (1392)
Q Consensus 557 L~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g 636 (1392)
+ ..+++++|++|||+ |+|++|++++++|++.|++|+++++++++++++++ ++.+++++.+.. .+
T Consensus 160 ~-~~~~~~~~~~vlV~-g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~----------~~ 223 (329)
T cd08298 160 L-KLAGLKPGQRLGLY-GFGASAHLALQIARYQGAEVFAFTRSGEHQELARE----LGADWAGDSDDL----------PP 223 (329)
T ss_pred H-HhhCCCCCCEEEEE-CCcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHH----hCCcEEeccCcc----------CC
Confidence 9 88999999999999 57999999999999999999999999999999954 566777776542 34
Q ss_pred CcceEEEecC-chhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHH
Q psy1119 637 RGVDLVLNSL-AEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKA 715 (1392)
Q Consensus 637 ~GvDvVlds~-~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~ 715 (1392)
+++|+++++. .+..+..++++++++|+++.+|... .......+..+.++..+.+..... ......+.++
T Consensus 224 ~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~l 293 (329)
T cd08298 224 EPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHM-SDIPAFDYELLWGEKTIRSVANLT---------RQDGEEFLKL 293 (329)
T ss_pred CcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCC-CCCCccchhhhhCceEEEEecCCC---------HHHHHHHHHH
Confidence 6899999974 4567899999999999999888432 111111222233445555442111 1223445567
Q ss_pred HHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEE
Q psy1119 716 IDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 716 l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI 752 (1392)
++++.+++. .++|+++++++||+.+.++++.||+|+
T Consensus 294 ~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 294 AAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred HHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 888888874 688999999999999999999999874
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-25 Score=263.79 Aligned_cols=286 Identities=20% Similarity=0.309 Sum_probs=225.2
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~-------- 506 (1392)
.+.+.+.|.|. + ++++||+||+.++|+|++|++...|.++.. .|.++|||++|+|++
T Consensus 11 ~~~~~~~~~p~-~------~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~--------~~~~~g~e~~G~V~~vG~~v~~~ 75 (345)
T cd08287 11 DIRVEEVPDPV-I------EEPTDAVIRVVATCVCGSDLWPYRGVSPTR--------APAPIGHEFVGVVEEVGSEVTSV 75 (345)
T ss_pred ceeEEeCCCCC-C------CCCCeEEEEEeeeeecccchhhhcCCCCCC--------CCcccccceEEEEEEeCCCCCcc
Confidence 47788888775 1 379999999999999999999988876421 256899999999873
Q ss_pred -CCCeEEE-eec--------------------------CCcccceEEeccc--ceEEcCCCCCHhhHh-----hhhHHHH
Q psy1119 507 -SGKRVMG-LTS--------------------------GRSLANCCETDVE--MAWEIPDQWTLEDAA-----TVPCVYA 551 (1392)
Q Consensus 507 -vGdrV~g-l~~--------------------------~g~~a~~v~~~~~--~~~~iPd~ls~e~AA-----~lp~~~~ 551 (1392)
+||+|++ +.. +|+|++|+.++.. .++++|++++++++. ++.++++
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~ 155 (345)
T cd08287 76 KPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMG 155 (345)
T ss_pred CCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHH
Confidence 5778876 221 2789999999975 999999999983221 2225789
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHH
Q psy1119 552 TAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLV 630 (1392)
Q Consensus 552 TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i 630 (1392)
|||+++ ..+++++|++|+|+ |+|++|++++|+|+++|++ ++++.+++++.+.+++ +++++++++++.++.+.+
T Consensus 156 ~a~~~~-~~~~~~~g~~vlI~-g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~----~ga~~v~~~~~~~~~~~i 229 (345)
T cd08287 156 TGHHAA-VSAGVRPGSTVVVV-GDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALARE----FGATDIVAERGEEAVARV 229 (345)
T ss_pred HHHHHH-HhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCceEecCCcccHHHHH
Confidence 999998 47899999999997 5799999999999999996 6677767767776654 567899999988899999
Q ss_pred HHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhhhhhCHHHHHHH
Q psy1119 631 MKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFFAEQEWKMSL 708 (1392)
Q Consensus 631 ~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~~~~~~~~~~ 708 (1392)
.+.++++|+|+++|++++ ..+..++++++++|+++.+|.... ...+.. ..|.+++++.+.... ....
T Consensus 230 ~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 298 (345)
T cd08287 230 RELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG--GVELDVRELFFRNVGLAGGPAP---------VRRY 298 (345)
T ss_pred HHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC--CCccCHHHHHhcceEEEEecCC---------cHHH
Confidence 999988899999999965 578999999999999999986542 122222 457788998874221 1234
Q ss_pred HHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 709 QKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 709 ~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
...+.+++.+|.+++ ++.++|+++++++||+.+..++.. |++|+
T Consensus 299 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 344 (345)
T cd08287 299 LPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR 344 (345)
T ss_pred HHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence 455567788899887 467889999999999998877665 98875
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd05281 TDH Threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-25 Score=262.23 Aligned_cols=289 Identities=22% Similarity=0.307 Sum_probs=223.3
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~-------- 506 (1392)
++.+.+.+.|. +.+++++|+|.++|+|+.|+.++.+..... .....|.++|+|++|+|+.
T Consensus 12 ~~~~~~~~~~~--------~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~----~~~~~~~~~g~e~~G~V~~~G~~v~~~ 79 (341)
T cd05281 12 GAELVEVPVPK--------PGPGEVLIKVLAASICGTDVHIYEWDEWAQ----SRIKPPLIFGHEFAGEVVEVGEGVTRV 79 (341)
T ss_pred ceEEEeCCCCC--------CCCCeEEEEEEEEEEcccchHHHcCCCCcc----ccCCCCcccccceEEEEEEECCCCCCC
Confidence 68888887765 689999999999999999998765431000 0112356899999999873
Q ss_pred -CCCeEEEee---------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHH
Q psy1119 507 -SGKRVMGLT---------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMF 558 (1392)
Q Consensus 507 -vGdrV~gl~---------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~ 558 (1392)
+||+|.++. ..|+|++|+.++...++++|+++++++| +++.++.++++++.
T Consensus 80 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~~ 158 (341)
T cd05281 80 KVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTVL 158 (341)
T ss_pred CCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHHHH
Confidence 678898741 2478999999999999999999998554 66778999999875
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCC
Q psy1119 559 ICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGR 637 (1392)
Q Consensus 559 ~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~ 637 (1392)
...++|++|||+| +|++|++++|+|+.+|+ +|+++.++++|.+.+++ ++.+++++++..++. .+++.++++
T Consensus 159 --~~~~~g~~vlV~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~-~~~~~~~~~ 230 (341)
T cd05281 159 --AGDVSGKSVLITG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKK----MGADVVINPREEDVV-EVKSVTDGT 230 (341)
T ss_pred --hcCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----hCcceeeCcccccHH-HHHHHcCCC
Confidence 4568999999975 69999999999999999 68888778888877765 567889988888888 899999989
Q ss_pred cceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHH
Q psy1119 638 GVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAI 716 (1392)
Q Consensus 638 GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l 716 (1392)
++|++||+.++ .....++++|+++|+++.+|.........+....+.+++++.+...... ......+.+++
T Consensus 231 ~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l 302 (341)
T cd05281 231 GVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKM--------FETWYQVSALL 302 (341)
T ss_pred CCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCc--------chhHHHHHHHH
Confidence 99999999865 5778999999999999999865321111111124456677766542111 11233455678
Q ss_pred HcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEE
Q psy1119 717 DAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 717 ~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
.+|.+.+ ++..+++++++.+||+.+.+++ .||+|++
T Consensus 303 ~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~ 340 (341)
T cd05281 303 KSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLY 340 (341)
T ss_pred HcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEec
Confidence 8888763 5678899999999999999999 9999875
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >PLN02702 L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-24 Score=260.27 Aligned_cols=290 Identities=19% Similarity=0.235 Sum_probs=218.7
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee-------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD------- 506 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~------- 506 (1392)
..+.+.+.+.|. +.++||+|||.++|+|+.|+....|..... + ....|.++|+|++|+|++
T Consensus 27 ~~l~~~~~~~p~--------~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~-~---~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
T PLN02702 27 NTLKIQPFKLPP--------LGPHDVRVRMKAVGICGSDVHYLKTMRCAD-F---VVKEPMVIGHECAGIIEEVGSEVKH 94 (364)
T ss_pred CceEEEeccCCC--------CCCCeEEEEEEEEEEchhhhHHHcCCCCcc-c---cCCCCcccccceeEEEEEECCCCCC
Confidence 457788877763 688999999999999999999987743211 0 011366899999999873
Q ss_pred --CCCeEEEe-------------------------e---cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHH
Q psy1119 507 --SGKRVMGL-------------------------T---SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYA 556 (1392)
Q Consensus 507 --vGdrV~gl-------------------------~---~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~a 556 (1392)
+||+|++. . ..|+|++|+.++...++++|+++++++||+. .+++++|++
T Consensus 95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~ 173 (364)
T PLN02702 95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHA 173 (364)
T ss_pred CCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHH
Confidence 67888751 1 1488999999999999999999999999863 356668888
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCCCcCceeeC--CCccHHHHHHHH
Q psy1119 557 MFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIKEENIGNS--RDTSFEQLVMKR 633 (1392)
Q Consensus 557 L~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~~~~i~~s--~~~~~~~~i~~~ 633 (1392)
+ ..+++.+|++|||+ |+|++|++++|+|+.+|++ |+++..+++|.+.+++ ++++++++. +..++.+.+.+.
T Consensus 174 ~-~~~~~~~g~~vlI~-g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~ 247 (364)
T PLN02702 174 C-RRANIGPETNVLVM-GAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQ----LGADEIVLVSTNIEDVESEVEEI 247 (364)
T ss_pred H-HhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCCEEEecCcccccHHHHHHHH
Confidence 7 77899999999999 5699999999999999997 5566666777776654 567776553 445677777655
Q ss_pred --cCCCcceEEEecCc-hhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHH
Q psy1119 634 --TKGRGVDLVLNSLA-EEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQK 710 (1392)
Q Consensus 634 --T~g~GvDvVlds~~-~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~ 710 (1392)
+.++++|+|||+.+ ...+..++++++++|+++.+|..... ..........+++++.++.... ....
T Consensus 248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~----------~~~~ 316 (364)
T PLN02702 248 QKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNE-MTVPLTPAAAREVDVVGVFRYR----------NTWP 316 (364)
T ss_pred hhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC-CcccHHHHHhCccEEEEeccCh----------HHHH
Confidence 33568999999998 57889999999999999999964221 1112223456778887764321 1223
Q ss_pred HHHHHHHcCCCC--Ccceeeecc--ccHHHHHHHHHcCCccceEEEE
Q psy1119 711 ALQKAIDAGAVQ--PLVRTIFPE--DKVEEAFRYMAAGKHIGKVIIK 753 (1392)
Q Consensus 711 ~~~~~l~~g~l~--pl~~~vf~l--~ev~eA~~~l~~g~~~GKvVI~ 753 (1392)
.+.+++++|.+. +++.++|++ +++++||+.+.+++..+|+|+.
T Consensus 317 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 317 LCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred HHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 455678888876 456788665 7999999999998888999884
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.5e-24 Score=267.77 Aligned_cols=379 Identities=16% Similarity=0.178 Sum_probs=243.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCc---eeeCCCcc-HHHHHHHHc-CCCcc
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEEN---IGNSRDTS-FEQLVMKRT-KGRGV 639 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~---i~~s~~~~-~~~~i~~~T-~g~Gv 639 (1392)
+|.++||+||++|+|.+.++.....|++|+.+.++.++.+.+.+.. +... ..|-.+.+ +.+.+.... ...++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 5889999999999999999999999999999998888776666543 2221 23333332 222222211 11269
Q ss_pred eEEEecCch--h--------------------------HHHHHHhccc---CCeEEEEEcccccccCcc---------c-
Q psy1119 640 DLVLNSLAE--E--------------------------KLQASVRCLA---QGGRFLEIGKFDLANNNM---------L- 678 (1392)
Q Consensus 640 DvVlds~~~--~--------------------------~l~~s~~~La---~~Gr~v~iG~~~~~~~~~---------l- 678 (1392)
|+++++.+. . ..++.+..+. .+|++|.++........+ .
T Consensus 81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaa 160 (520)
T PRK06484 81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAA 160 (520)
T ss_pred CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHH
Confidence 999997642 0 1223344442 235999887532211100 0
Q ss_pred --------cccccCCCcEEEEEechhhhhhCHHHHHHHHH---HHHHHHHcCCCCCcceeeeccccHHHHHHHHHcC---
Q psy1119 679 --------GMEVFMRETSFHGVMLDNFFFAEQEWKMSLQK---ALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAG--- 744 (1392)
Q Consensus 679 --------~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~---~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g--- 744 (1392)
....-..++.+..+....+.. + ....... .....+.. ..|. ......+++.+++.++.+.
T Consensus 161 l~~l~~~la~e~~~~~i~v~~i~Pg~v~t--~-~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~va~~v~~l~~~~~~ 234 (520)
T PRK06484 161 VISLTRSLACEWAAKGIRVNAVLPGYVRT--Q-MVAELERAGKLDPSAVRS--RIPL-GRLGRPEEIAEAVFFLASDQAS 234 (520)
T ss_pred HHHHHHHHHHHhhhhCeEEEEEccCCcCc--h-hhhhhcccchhhhHHHHh--cCCC-CCCcCHHHHHHHHHHHhCcccc
Confidence 001112345555544332111 0 0000000 00000000 0011 1122457788888887653
Q ss_pred CccceEEEEecCCCCccccCCcccccccCCccccCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHH
Q psy1119 745 KHIGKVIIKIRDEEPTKICTPKVKQLLAVPRYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQAL 824 (1392)
Q Consensus 745 ~~~GKvVI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~ 824 (1392)
...|+++. ++..........+....+ .+......++++|||||++|||+++|++|+++|++ |++++|+... .+.
T Consensus 235 ~~~G~~~~-~~gg~~~~~~~~~~~~~~-~~~~~~~~~k~~lItGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~---~~~ 308 (520)
T PRK06484 235 YITGSTLV-VDGGWTVYGGSGPASTAQ-APSPLAESPRVVAITGGARGIGRAVADRFAAAGDR-LLIIDRDAEG---AKK 308 (520)
T ss_pred CccCceEE-ecCCeeccccccCCCCcc-CCCCcccCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHH---HHH
Confidence 34555543 222111000000000001 11122457899999999999999999999999996 8888887421 222
Q ss_pred HHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcCCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHH
Q psy1119 825 RIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKY 902 (1392)
Q Consensus 825 ~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~ 902 (1392)
..+ ..+.++..+.+|++|+++++++++++ +++|+||++|||||+.. ..++.+.+.++|++++++|+.|++++.++
T Consensus 309 ~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 385 (520)
T PRK06484 309 LAE---ALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARA 385 (520)
T ss_pred HHH---HhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHH
Confidence 222 23567788999999999999999998 67899999999999874 36788999999999999999999999998
Q ss_pred HhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 903 SRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 903 ~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+.+.+...++||++||.++..+.++++.|+++|+++++|++..+.+ |....+|..|.+.
T Consensus 386 ~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~ 448 (520)
T PRK06484 386 AARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIE 448 (520)
T ss_pred HHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCcc
Confidence 8776656689999999999999999999999999999999988766 5667788777664
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=248.61 Aligned_cols=214 Identities=21% Similarity=0.230 Sum_probs=154.2
Q ss_pred ceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHH
Q psy1119 1158 NTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMV 1231 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~V 1231 (1392)
+|||||||++|++++|.+|+..|....++|+++ .+.+..++++||+.|++.|++. ||+|||+|+||||||.|
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~--QP~GPy~L~G~S~GG~v 78 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRV--QPEGPYVLLGWSLGGAV 78 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCceeeccccCcccccccccCCHHHHHHHHHHHHHHh--CCCCCEEEEeeccccHH
Confidence 489999999999999999999999999999987 3567889999999999999964 59999999999999999
Q ss_pred HHHHHHHHHHcCCcc-EEEEEeCCCCCCccc-----------------------------cCCCCC-hHHHHHHHHhcCC
Q psy1119 1232 ALELAIKLEQLGTKC-HLYLVDSAPDYVLTS-----------------------------LRKLPD-WNAKLNYFLDLMP 1280 (1392)
Q Consensus 1232 A~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~-----------------------------l~~~~~-~~~~l~~~~~~~~ 1280 (1392)
|||||+||+++|+.| .|+|+|++++....+ +..... ..+.+.+..+.+.
T Consensus 79 A~evA~qL~~~G~~Va~L~llD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~e~~~~l~~~~~~~~ 158 (257)
T COG3319 79 AFEVAAQLEAQGEEVAFLGLLDAVPPHNGRKEETRNRWRRYARTAEKTANGLDPEVLAEILASLGAEAAEYLARALEALA 158 (257)
T ss_pred HHHHHHHHHhCCCeEEEEEEeccCCCccchhhhhhhHHHHhhhhhhhhccccccccchhhccccchhhHHHHHHHHHHHh
Confidence 999999999999999 788999988721000 000000 0112233333333
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEccCcccccc
Q psy1119 1281 EDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDGNHFTVLD 1359 (1392)
Q Consensus 1281 ~~~~~~~~~l~~~~~~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G~H~~ml~ 1359 (1392)
.........+.........+.....+|... +.+...+++.+.... .......+|++++.+...+. ++|+|+.|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~r~~~~~~~~~~~W~~~~~~~~~~~-i~g~H~~ml~ 234 (257)
T COG3319 159 QAGLDKAAFILELEAALLLRVRALGTALFK---PSDGLPTLFAADRLHDEGFPPLAGWSGWIADLDIVR-IDGTHFDMLK 234 (257)
T ss_pred ccccchHHHHHHhHHHHhhhhhhcceeeec---cCCCcceeeeccccccccCCCcCcHHHHhCCCCeee-ccccHHHHhc
Confidence 222222233333333333344444555444 455566667666543 22336789999998766666 9999999999
Q ss_pred ChHHHHHHHhhhcccCCC
Q psy1119 1360 NIKSAQIIMHEDSTDFKT 1377 (1392)
Q Consensus 1360 ~~~~~~i~~~l~~~L~~~ 1377 (1392)
++.+...+..+.+.+...
T Consensus 235 ep~~~~~~~~i~~~l~~~ 252 (257)
T COG3319 235 EPHVATVAPLILAALNAI 252 (257)
T ss_pred chhhHHHHHHHHHHHhhc
Confidence 999999999888887764
|
|
| >cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-23 Score=244.12 Aligned_cols=242 Identities=21% Similarity=0.330 Sum_probs=197.0
Q ss_pred CCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee------
Q psy1119 433 MSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD------ 506 (1392)
Q Consensus 433 l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~------ 506 (1392)
...+.+.+.+.|. +.+++|+|+|.++++|+.|++...|.+... ..|.++|+|++|+|.+
T Consensus 11 ~~~~~~~~~~~p~--------~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~-------~~p~~~G~e~~G~V~~vG~~v~ 75 (306)
T cd08258 11 PGNVELREVPEPE--------PGPGEVLIKVAAAGICGSDLHIYKGDYDPV-------ETPVVLGHEFSGTIVEVGPDVE 75 (306)
T ss_pred CCceEEeecCCCC--------CCCCeEEEEEEEEEechhhHHHHcCCCCcC-------CCCeeeccceEEEEEEECCCcC
Confidence 3568888888875 689999999999999999999988875321 1256899999999873
Q ss_pred ---CCCeEEEeec----------------------------CCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHH
Q psy1119 507 ---SGKRVMGLTS----------------------------GRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVY 555 (1392)
Q Consensus 507 ---vGdrV~gl~~----------------------------~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~ 555 (1392)
+||+|+++.. .|+|++|+.++...++++|+++++++|+ ++.+++|||+
T Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~ 154 (306)
T cd08258 76 GWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVH 154 (306)
T ss_pred cCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHH
Confidence 6889987641 4889999999999999999999999887 7779999999
Q ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-c-ChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHH
Q psy1119 556 AMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTV-G-TPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKR 633 (1392)
Q Consensus 556 aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv-~-s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~ 633 (1392)
++...+++++|++|||. |+|++|++++|+|+.+|++|++|. . +++|.+.+++ ++.+++ +.+..++.+.+++.
T Consensus 155 ~l~~~~~~~~g~~vlI~-g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~----~g~~~~-~~~~~~~~~~l~~~ 228 (306)
T cd08258 155 AVAERSGIRPGDTVVVF-GPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKE----LGADAV-NGGEEDLAELVNEI 228 (306)
T ss_pred HHHHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHH----hCCccc-CCCcCCHHHHHHHH
Confidence 99999999999999997 579999999999999999998773 2 3446666654 466788 88888899999998
Q ss_pred cCCCcceEEEecCc-hhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechh
Q psy1119 634 TKGRGVDLVLNSLA-EEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDN 696 (1392)
Q Consensus 634 T~g~GvDvVlds~~-~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~ 696 (1392)
++++++|++||+.+ +..+..++++|+++|+++.+|.............++.+++++.|+.+..
T Consensus 229 ~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 292 (306)
T cd08258 229 TDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSST 292 (306)
T ss_pred cCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCc
Confidence 88889999999985 4678899999999999999997642111111123456899999986543
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-23 Score=226.23 Aligned_cols=218 Identities=17% Similarity=0.168 Sum_probs=180.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++|||+++|||.++|+.|++.|++ |++..|+. +..+++..++.+ .++.+...||+|.++++++++.+ ++
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~-vvl~aRR~---drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~ 78 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAK-VVLAARRE---ERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEE 78 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCe-EEEEeccH---HHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999999997 99999984 223333444433 67899999999999999999988 78
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
|++||.+|||||+..-.++.+.+.++|+.++++|+.|..+..++..+.| ++.+++|++||++|....+|-+.|+|+|+
T Consensus 79 ~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~ 158 (246)
T COG4221 79 FGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKA 158 (246)
T ss_pred hCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHH
Confidence 9999999999999888999999999999999999999999999887765 35589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccCccccccchhh-h--hHHHHHcCccccchhhhHHHHHHHHccCCCe
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVGEVGLVADMAE-D--NLEVVIGGTLQQRISNCLECLNEFLIQSEPI 1003 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~~~G~~~~~~~-~--~~~~~~~g~~~~~~~~~l~~l~~~l~~~~~~ 1003 (1392)
|+.+|++.+|++ +.....|+.|.++..-+..-... . ..+....+..++.+++..+.+-+++.+|..+
T Consensus 159 aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~v 232 (246)
T COG4221 159 AVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQHV 232 (246)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCcc
Confidence 999999999987 45678999998866544322111 1 1222235666778888888888888887653
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-23 Score=237.25 Aligned_cols=226 Identities=23% Similarity=0.325 Sum_probs=193.7
Q ss_pred eEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---------eCCCeEEEee-------------
Q psy1119 458 HDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR---------DSGKRVMGLT------------- 515 (1392)
Q Consensus 458 evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~---------~vGdrV~gl~------------- 515 (1392)
||+|+|.++|+|+.|++...|.++.. ...|.++|+|++|+|. ++||+|+++.
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~------~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~ 74 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPP------PKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCREL 74 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcC------CCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhh
Confidence 58999999999999999998876511 1236789999999986 3689998865
Q ss_pred ----------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHH
Q psy1119 516 ----------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINL 585 (1392)
Q Consensus 516 ----------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIql 585 (1392)
..|++++|+.++.+.++++|+++++++|+.++++++|||+++...+.+++|++|||+|+++ +|++++++
T Consensus 75 ~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~ 153 (271)
T cd05188 75 CPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQL 153 (271)
T ss_pred CCCCCEeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHH
Confidence 2588999999999999999999999999999999999999998888889999999998866 99999999
Q ss_pred HHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEE
Q psy1119 586 ARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRF 664 (1392)
Q Consensus 586 A~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~ 664 (1392)
|+..|++|++++.++++.+++++ ++.+++++..+.++.+.+. .+.++++|+++|+.++ .....++++++++|++
T Consensus 154 a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~ 228 (271)
T cd05188 154 AKAAGARVIVTDRSDEKLELAKE----LGADHVIDYKEEDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRI 228 (271)
T ss_pred HHHcCCeEEEEcCCHHHHHHHHH----hCCceeccCCcCCHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEE
Confidence 99999999999999999998865 4578888888888888777 6777899999999988 7889999999999999
Q ss_pred EEEcccccccCccccccccCCCcEEEEEech
Q psy1119 665 LEIGKFDLANNNMLGMEVFMRETSFHGVMLD 695 (1392)
Q Consensus 665 v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~ 695 (1392)
+.+|..+........+..+.+++++.++...
T Consensus 229 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (271)
T cd05188 229 VVVGGTSGGPPLDDLRRLLFKELTIIGSTGG 259 (271)
T ss_pred EEEccCCCCCCcccHHHHHhcceEEEEeecC
Confidence 9999765443333345667889999988654
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-23 Score=289.09 Aligned_cols=297 Identities=19% Similarity=0.248 Sum_probs=221.3
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcccCCCCCCCc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSFENDDKSKPV 1098 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~~~~~~~~~~ 1098 (1392)
+.+.+.|+++|++ +.++.+++||++|+|||+|++|.++|++.||+.+++.++ .++|+++|++.+........
T Consensus 981 ~~l~~~~~~~l~~---~~~~~~~~ff~lGg~Sl~a~~l~~~l~~~~~~~l~~~~~~~~pti~~la~~l~~~~~~~~---- 1053 (1296)
T PRK10252 981 TIIAAAFSSLLGC---DVVDADADFFALGGHSLLAMKLAAQLSRQFARQVTPGQVMVASTVAKLATLLDAEEDESR---- 1053 (1296)
T ss_pred HHHHHHHHHHhCC---CCCCCCcCHHHcCCChHHHHHHHHHHHHHhCCCCCHHHHhcCCCHHHHHHHHhccccccc----
Confidence 4689999999998 479999999999999999999999999999999999999 99999999999875421100
Q ss_pred cccccCCcccccccCCCChhhHHHHHHhhccccccCCcccccCCccCCCCccccCCCCCceeEeecCCCccccccHHHHh
Q psy1119 1099 STEASGGQVTALSVEDIPDVGIQYLMRTIGDEILANKPVIRLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIATVLEPLAK 1178 (1392)
Q Consensus 1099 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~pLF~vp~agG~~~~y~~La~ 1178 (1392)
.. ...+++++. .+.++||||+|+++|.+++|.+|++
T Consensus 1054 --~~------------------------------~~~~~~~~~------------~~~~~~l~~lh~~~g~~~~~~~l~~ 1089 (1296)
T PRK10252 1054 --RL------------------------------GFGTILPLR------------EGDGPTLFCFHPASGFAWQFSVLSR 1089 (1296)
T ss_pred --cc------------------------------cccceeecc------------cCCCCCeEEecCCCCchHHHHHHHH
Confidence 00 001122111 1234789999999999999999999
Q ss_pred hcCCceEEEecC------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHHHHHHHHHHHcCCcc-EEEEE
Q psy1119 1179 NINAQVLVFQFD------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLV 1251 (1392)
Q Consensus 1179 ~L~~~~~v~~l~------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLi 1251 (1392)
+|....+++.++ .++...++++||+.|++.|+.. ++.+||+|+||||||.+|+|+|++|++++..+ .++++
T Consensus 1090 ~l~~~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~--~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~ 1167 (1296)
T PRK10252 1090 YLDPQWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQ--QPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLL 1167 (1296)
T ss_pred hcCCCCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhh--CCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEe
Confidence 998888888875 2334579999999999999854 47899999999999999999999999999888 78899
Q ss_pred eCCCCCCcc--cc--CCCCC--hHH---HHHHHHhcCCccccCCHHHHHHHHHHHHHHHHhhccccCCCCCcccceEEEE
Q psy1119 1252 DSAPDYVLT--SL--RKLPD--WNA---KLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLL 1322 (1392)
Q Consensus 1252 D~~p~~~~~--~l--~~~~~--~~~---~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~y~~~~~~~~~~pi~l~ 1322 (1392)
|+.++.... .. ..... ... ....+...... ....+....+...+..+..+...|.+. ++.++++++
T Consensus 1168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 1242 (1296)
T PRK10252 1168 DTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQG--SLSTELFTTIEGNYADAVRLLTTAHSV---PFDGKATLF 1242 (1296)
T ss_pred cCCCcccccccccccccCChhhhhhhhhhHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHHhccCC---cccCceEEE
Confidence 986653210 00 00000 000 00111111111 113445566666677666677777765 788999999
Q ss_pred eeCCCC-CCChhhcCcccccCCCeEEEEEccCccccccChHHHHHHHhhhcccC
Q psy1119 1323 RPTEQA-LPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDSTDF 1375 (1392)
Q Consensus 1323 ~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~~~L~ 1375 (1392)
.+.++. .......+|++++ +.+.++.++|+|++|+.++++..++..+...|.
T Consensus 1243 ~~~~~~~~~~~~~~~W~~~~-~~~~~~~v~g~H~~~~~~~~~~~~~~~l~~~l~ 1295 (1296)
T PRK10252 1243 VAERTLQEGMSPEQAWSPWI-AELDVYRQDCAHVDIISPEAFEKIGPILRATLN 1295 (1296)
T ss_pred EcCCCCcccCCcccchhhhc-CCCEEEECCCCHHHHCCcHHHHHHHHHHHHHhc
Confidence 998875 4445667899998 899999999999999999888877777766543
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-23 Score=221.16 Aligned_cols=166 Identities=25% Similarity=0.339 Sum_probs=153.4
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g 860 (1392)
|++|||||++|||+++|++|+++|+++|++++|+ .+.+......+.++..|.++.++.||++++++++++++++ ..++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~-~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRS-EDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESS-CHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeec-ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 5899999999999999999999999999999998 3344556667788888999999999999999999999999 5789
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHH
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMER 940 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~ 940 (1392)
++|++|||||+..++.+.+++.++|+++++.|+.+.+++.+++.+ .+.+.||++||+++..|.++++.|+++|+++++
T Consensus 80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~ 157 (167)
T PF00106_consen 80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QGGGKIVNISSIAGVRGSPGMSAYSASKAALRG 157 (167)
T ss_dssp SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccchhhhhccccccceeeeeeehhee--ccccceEEecchhhccCCCCChhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999877 467999999999999999999999999999999
Q ss_pred HHHHHHHcCC
Q psy1119 941 ICEARRAEGL 950 (1392)
Q Consensus 941 la~~r~~~Gl 950 (1392)
|++..++++|
T Consensus 158 ~~~~la~e~~ 167 (167)
T PF00106_consen 158 LTQSLAAELL 167 (167)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhcC
Confidence 9999988753
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.1e-23 Score=235.74 Aligned_cols=201 Identities=21% Similarity=0.248 Sum_probs=155.8
Q ss_pred CCcccceEEeccc-ceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EE
Q psy1119 517 GRSLANCCETDVE-MAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IF 594 (1392)
Q Consensus 517 ~g~~a~~v~~~~~-~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~ 594 (1392)
.|+|+||+.+|+. .++++|+++++++||.+++++.|||+++.. ....+|++|||+|+ |++|++++|+|+++|++ |+
T Consensus 72 ~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi 149 (280)
T TIGR03366 72 SGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVV 149 (280)
T ss_pred cccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEE
Confidence 3889999999997 699999999999999999999999999854 45669999999965 99999999999999997 88
Q ss_pred EEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccc
Q psy1119 595 TTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLA 673 (1392)
Q Consensus 595 ~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~ 673 (1392)
++..+++|.+++++ ++++++++..+ ..+.+++.++++|+|+|||+++. ..++.++++++++|+++.+|.....
T Consensus 150 ~~~~~~~r~~~a~~----~Ga~~~i~~~~--~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~ 223 (280)
T TIGR03366 150 AADPSPDRRELALS----FGATALAEPEV--LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPG 223 (280)
T ss_pred EECCCHHHHHHHHH----cCCcEecCchh--hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCC
Confidence 88778888888876 67888888654 35667788888899999999975 5688999999999999999964321
Q ss_pred cCccc-cccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcC--C--CCCcceeeeccccH
Q psy1119 674 NNNML-GMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAG--A--VQPLVRTIFPEDKV 734 (1392)
Q Consensus 674 ~~~~l-~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g--~--l~pl~~~vf~l~ev 734 (1392)
....+ ...++.+++++.|+.... ++...++. +++.++ . ++++++++||++|+
T Consensus 224 ~~~~i~~~~~~~~~~~i~g~~~~~-----~~~~~~~~----~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 224 GPVALDPEQVVRRWLTIRGVHNYE-----PRHLDQAV----RFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred CceeeCHHHHHhCCcEEEecCCCC-----HHHHHHHH----HHHHhhCCCCCHHHHhhcccccccC
Confidence 11122 234567899999875322 22223333 444442 3 33468899999863
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >KOG1200|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.6e-23 Score=208.43 Aligned_cols=176 Identities=19% Similarity=0.204 Sum_probs=145.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
..+..+||||++|||+++|..|+++||| +++..++. ..+++....|..+| .-..+.|||+++++++.++++. +.
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~Gar-v~v~dl~~---~~A~ata~~L~g~~-~h~aF~~DVS~a~~v~~~l~e~~k~ 87 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKKGAR-VAVADLDS---AAAEATAGDLGGYG-DHSAFSCDVSKAHDVQNTLEEMEKS 87 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhcCcE-EEEeecch---hhHHHHHhhcCCCC-ccceeeeccCcHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999 55555542 23445555565544 4567899999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhh--CC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTM--CP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~--~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+|+++.++||||+.+|+.+..|+.++|+.+++.|+.|++...+++.+. +. ....||++||+.+.+||.||+||+|+
T Consensus 88 ~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAs 167 (256)
T KOG1200|consen 88 LGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAAS 167 (256)
T ss_pred cCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhh
Confidence 999999999999999999999999999999999999999999987443 12 22489999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCC-CeEEEEcccc
Q psy1119 935 NSIMERICEARRAEGL-PGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~Gl-p~~ai~~g~~ 960 (1392)
|+++.+|++..++++. ..+.+|.-.+
T Consensus 168 K~GvIgftktaArEla~knIrvN~VlP 194 (256)
T KOG1200|consen 168 KGGVIGFTKTAARELARKNIRVNVVLP 194 (256)
T ss_pred cCceeeeeHHHHHHHhhcCceEeEecc
Confidence 9999999998777643 2444444444
|
|
| >KOG1196|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.2e-21 Score=207.28 Aligned_cols=289 Identities=16% Similarity=0.195 Sum_probs=218.7
Q ss_pred CCCCeEEEEEEEEecChhhHHHhcCCCChhhh-hhhccccccccceeeEEEEe-------eCCCeEEEeecCCcccceEE
Q psy1119 454 DNINHDIAQIYYSSINFRDIMLTTAKLAPEVI-ESRRLYQHCVIGFEYSGRLR-------DSGKRVMGLTSGRSLANCCE 525 (1392)
Q Consensus 454 ~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~-~~~~~~~p~~lG~E~sGvV~-------~vGdrV~gl~~~g~~a~~v~ 525 (1392)
+++++|+||..|-+..|.- ..+++...+..+ +..... ..+.| ..+|+|. +.||-|.|+. +|.+|..
T Consensus 35 ~~s~~vlvknlYLS~DPym-R~rM~~~~~~~y~~~~~~G-~pi~g-~GV~kVi~S~~~~~~~GD~v~g~~---gWeeysi 108 (343)
T KOG1196|consen 35 LGSGEVLVKNLYLSCDPYM-RIRMGKPDPSDYAPPYEPG-KPIDG-FGVAKVIDSGHPNYKKGDLVWGIV---GWEEYSV 108 (343)
T ss_pred CCCccEEeEeeeecCCHHH-HhhccCCCcccccCcccCC-cEecC-CceEEEEecCCCCCCcCceEEEec---cceEEEE
Confidence 6889999999999986532 123444322211 111111 12344 5566665 5799999987 6889998
Q ss_pred ecccc--eEEcC--CCCCHhhH-hhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q psy1119 526 TDVEM--AWEIP--DQWTLEDA-ATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTP 600 (1392)
Q Consensus 526 ~~~~~--~~~iP--d~ls~e~A-A~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ 600 (1392)
++... .+++| .+.++.-. ..+..+..|||.++.+....++|++|+|.||+|+||+.+.|+|+.+||+|+..++|+
T Consensus 109 i~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~ 188 (343)
T KOG1196|consen 109 ITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSK 188 (343)
T ss_pred ecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCCh
Confidence 87753 34444 34444332 345668999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHCCCCCcCceeeCCCc-cHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCcc-c
Q psy1119 601 EKREFIRKTFPFIKEENIGNSRDT-SFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNM-L 678 (1392)
Q Consensus 601 ek~~~l~~~~p~l~~~~i~~s~~~-~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~-l 678 (1392)
||.++++.. +|.+..||+.++ +....+++ ....|+|+.||.+|+..+++.+..+...||++..|.....+... .
T Consensus 189 EKv~ll~~~---~G~d~afNYK~e~~~~~aL~r-~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~ 264 (343)
T KOG1196|consen 189 EKVDLLKTK---FGFDDAFNYKEESDLSAALKR-CFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYNLENPE 264 (343)
T ss_pred hhhhhhHhc---cCCccceeccCccCHHHHHHH-hCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhccccCCc
Confidence 999999985 577889999998 55555655 45579999999999999999999999999999999754333211 1
Q ss_pred c----ccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 679 G----MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 679 ~----~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+ ...+.|.+.+.|+....+... ....++.+..++++|+++-..+-.-.++..+.||.-|-+|+++||-++.+
T Consensus 265 ~~~~l~~ii~Kr~~iqgflv~d~~d~----~~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvGKqiv~v 340 (343)
T KOG1196|consen 265 GLHNLSTIIYKRIRIQGFLVSDYLDK----YPKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVGKQLVKV 340 (343)
T ss_pred cccchhhheeeeEEeeeEEeechhhh----hHHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHhccCcccceEEEe
Confidence 1 234567788888765554433 24566677788999999887665667999999999999999999998887
Q ss_pred cC
Q psy1119 755 RD 756 (1392)
Q Consensus 755 ~~ 756 (1392)
..
T Consensus 341 a~ 342 (343)
T KOG1196|consen 341 AR 342 (343)
T ss_pred ec
Confidence 54
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-21 Score=273.08 Aligned_cols=213 Identities=23% Similarity=0.282 Sum_probs=172.4
Q ss_pred cccCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcc-------------------------------------
Q psy1119 776 YYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVK------------------------------------- 818 (1392)
Q Consensus 776 ~~~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~------------------------------------- 818 (1392)
..+.++++||||||++|||+++|++|+++|..+|++++|+...
T Consensus 1992 ~~l~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~ 2071 (2582)
T TIGR02813 1992 AALNSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDA 2071 (2582)
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhh
Confidence 4578899999999999999999999999953359999998210
Q ss_pred -------cHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhh
Q psy1119 819 -------NGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGP 891 (1392)
Q Consensus 819 -------~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~ 891 (1392)
..+....++.+++.|.++.++.|||+|.++++++++.+.+.++|||||||||+..++.+.++|.++|++++++
T Consensus 2072 ~~~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~ 2151 (2582)
T TIGR02813 2072 LVRPVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGT 2151 (2582)
T ss_pred cccccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHH
Confidence 0112233455667899999999999999999999999854479999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHHHHHHHHHcC--CCeEEEEccccCccccccch
Q psy1119 892 KANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEG--LPGLAVEWGAVGEVGLVADM 969 (1392)
Q Consensus 892 kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~la~~r~~~G--lp~~ai~~g~~~~~G~~~~~ 969 (1392)
|+.|+++|.+++.+. .+++||+|||+++.+|++||+.|++||+++++|++.++.++ ..+.+|+||+|. .||+...
T Consensus 2152 nv~G~~~Ll~al~~~--~~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wd-tgm~~~~ 2228 (2582)
T TIGR02813 2152 KVDGLLSLLAALNAE--NIKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWD-GGMVNPA 2228 (2582)
T ss_pred HHHHHHHHHHHHHHh--CCCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeec-CCccchh
Confidence 999999999988653 45799999999999999999999999999999999988874 567999999995 5776432
Q ss_pred hhhhHHHHHcCccccchhhhHHHH
Q psy1119 970 AEDNLEVVIGGTLQQRISNCLECL 993 (1392)
Q Consensus 970 ~~~~~~~~~~g~~~~~~~~~l~~l 993 (1392)
........|...+....+...+
T Consensus 2229 --l~~~~~~rg~~~ipl~ag~~~f 2250 (2582)
T TIGR02813 2229 --LKKMFNDRGVYVIPLDAGAELF 2250 (2582)
T ss_pred --HHHHHHhcccccCCCchhHHHh
Confidence 1122333454444455555555
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.6e-22 Score=220.78 Aligned_cols=180 Identities=26% Similarity=0.310 Sum_probs=153.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+|+++|||+++|||.++|..|+++|++ ++++.|+..+.+...+.+++.-... ++++++|||+|.++++++++.+ ..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~-l~lvar~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAK-LVLVARRARRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCc-eEEeehhhhhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHHHHHHHHh
Confidence 5899999999999999999999999997 8888887655444422222222222 6999999999999999999998 68
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC--CCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT--LGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~--l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
||.||.+|||||......++..+.++++.+|++|+.|+.++.+++.+++.+ .|+||++||++|..+.|..+.|+|+|+
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK~ 168 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKH 168 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHHH
Confidence 999999999999998778899999999999999999999999998777643 399999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCC--e-E--EEEccccC
Q psy1119 937 IMERICEARRAEGLP--G-L--AVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~Glp--~-~--ai~~g~~~ 961 (1392)
|+.+|++..|++-.+ . + .|..|.+.
T Consensus 169 Al~~f~etLR~El~~~~~~i~i~V~PG~V~ 198 (282)
T KOG1205|consen 169 ALEGFFETLRQELIPLGTIIIILVSPGPIE 198 (282)
T ss_pred HHHHHHHHHHHHhhccCceEEEEEecCcee
Confidence 999999999999655 2 3 36666653
|
|
| >KOG1201|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-21 Score=213.94 Aligned_cols=212 Identities=19% Similarity=0.164 Sum_probs=170.8
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
.-+++++|||||++|||+++|..+|++|++ +++.+.+.....+. .++.+..| ++..+.||+++.+++.++.+++
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~-~vl~Din~~~~~et---v~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk 109 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGAK-LVLWDINKQGNEET---VKEIRKIG-EAKAYTCDISDREEIYRLAKKVK 109 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCCe-EEEEeccccchHHH---HHHHHhcC-ceeEEEecCCCHHHHHHHHHHHH
Confidence 346899999999999999999999999995 88888886554444 44444446 8999999999999999999999
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
++.|+|+.+|||||+.....+.+++.+++++.+++|+.|.++..+++.+.|. +.+|+|+++|++|..|.+|-+.|+|+
T Consensus 110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaS 189 (300)
T KOG1201|consen 110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCAS 189 (300)
T ss_pred HhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhh
Confidence 6799999999999999999999999999999999999999999999977553 56999999999999999999999999
Q ss_pred HHHHHHHHHHHHHc-------CCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccC
Q psy1119 935 NSIMERICEARRAE-------GLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQS 1000 (1392)
Q Consensus 935 na~ld~la~~r~~~-------Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~ 1000 (1392)
|+++.+|.+..+.+ |...+.+..+.+. .||...... ...-.+.+.++++.+.+-.++...
T Consensus 190 K~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~-Tgmf~~~~~-----~~~l~P~L~p~~va~~Iv~ai~~n 256 (300)
T KOG1201|consen 190 KFAAVGFHESLSMELRALGKDGIKTTLVCPYFIN-TGMFDGATP-----FPTLAPLLEPEYVAKRIVEAILTN 256 (300)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecc-ccccCCCCC-----CccccCCCCHHHHHHHHHHHHHcC
Confidence 99998888876644 3445667776665 677654111 011133456666666655554443
|
|
| >cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-21 Score=224.14 Aligned_cols=241 Identities=20% Similarity=0.286 Sum_probs=184.8
Q ss_pred cccccceeeEEEEee---------CCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcC
Q psy1119 492 QHCVIGFEYSGRLRD---------SGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQ 562 (1392)
Q Consensus 492 ~p~~lG~E~sGvV~~---------vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~ 562 (1392)
.|.++|+|++|+|.+ +||+|+++ +++++|+.++...++++|++++++++|.+ ++++|||+++. .++
T Consensus 20 ~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~---~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~-~~~ 94 (277)
T cd08255 20 LPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF---GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGVR-DAE 94 (277)
T ss_pred CCcccCcceeEEEEEeCCCCCCCCCCCEEEec---CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHH-hcC
Confidence 478999999999873 57788775 36899999999999999999999999998 79999999984 789
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCCC-cCceeeCCCccHHHHHHHHcCCCcce
Q psy1119 563 MQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIK-EENIGNSRDTSFEQLVMKRTKGRGVD 640 (1392)
Q Consensus 563 l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~-~~~i~~s~~~~~~~~i~~~T~g~GvD 640 (1392)
+++|++||||| +|++|++++++|+++|++ |++++++++|.+++++ ++ .+++++... ..+.++++|
T Consensus 95 ~~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~--------~~~~~~~~d 161 (277)
T cd08255 95 PRLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEA----LGPADPVAADTA--------DEIGGRGAD 161 (277)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHH----cCCCccccccch--------hhhcCCCCC
Confidence 99999999995 699999999999999999 9999999999987665 34 455554322 224567899
Q ss_pred EEEecCc-hhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCH---HHHHHHHHHHHHHH
Q psy1119 641 LVLNSLA-EEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQ---EWKMSLQKALQKAI 716 (1392)
Q Consensus 641 vVlds~~-~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~---~~~~~~~~~~~~~l 716 (1392)
++||+.+ +.....++++++++|+++.+|..+.. .......+..+++++.+..+.......+ ....+..+.+.+++
T Consensus 162 ~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (277)
T cd08255 162 VVIEASGSPSALETALRLLRDRGRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLL 240 (277)
T ss_pred EEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHH
Confidence 9999976 46788999999999999999875433 1111122333566777776543221111 11123455566788
Q ss_pred HcCCCCCcceeeeccccHHHHHHHHHcC-CccceEE
Q psy1119 717 DAGAVQPLVRTIFPEDKVEEAFRYMAAG-KHIGKVI 751 (1392)
Q Consensus 717 ~~g~l~pl~~~vf~l~ev~eA~~~l~~g-~~~GKvV 751 (1392)
.+|.+++.+.++|+++++++||+.+.++ ....|++
T Consensus 241 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~ 276 (277)
T cd08255 241 AEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVV 276 (277)
T ss_pred HcCCccccccCccCHHHHHHHHHHHHcCCccceeee
Confidence 8999988888999999999999999876 2334654
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD |
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.2e-21 Score=213.84 Aligned_cols=179 Identities=22% Similarity=0.194 Sum_probs=157.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHh-cCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK-SYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~-~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+++||||+++|||.++|+.|+++|.. |+|++|+..+.. ++.++++ ..|++|.+++||+++++++.++.+++ .
T Consensus 5 ~~~~~lITGASsGIG~~~A~~lA~~g~~-liLvaR~~~kL~---~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~ 80 (265)
T COG0300 5 KGKTALITGASSGIGAELAKQLARRGYN-LILVARREDKLE---ALAKELEDKTGVEVEVIPADLSDPEALERLEDELKE 80 (265)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCcHHHHH---HHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHh
Confidence 5689999999999999999999999996 999999964433 3334444 35899999999999999999999998 5
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
..++||++|||||....++|.+.+.++..+.++.|+.+...|.+++.+.+. ..|++|+++|++|..+.|..+.|+|+|
T Consensus 81 ~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATK 160 (265)
T COG0300 81 RGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATK 160 (265)
T ss_pred cCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHH
Confidence 568999999999999999999999999999999999999999998866553 358999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
+|+-+|++.++.+ |..+.+++.|++..
T Consensus 161 a~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T 191 (265)
T COG0300 161 AFVLSFSEALREELKGTGVKVTAVCPGPTRT 191 (265)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEecCcccc
Confidence 9999999999887 56678888887643
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-20 Score=217.72 Aligned_cols=179 Identities=21% Similarity=0.232 Sum_probs=151.0
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCC------cccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSG------VKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNL 852 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~------~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l 852 (1392)
..++++|||||++|||+++|+.|+++|++ |+++.|+. ...+......++++..|.++.++.||++|.++++++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~-vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 82 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGAR-VVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL 82 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence 36799999999999999999999999997 66666653 111334445566666788899999999999999999
Q ss_pred HHHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC--------CCeEEEeccccccc
Q psy1119 853 LTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT--------LGQFVVFSSVSCGR 923 (1392)
Q Consensus 853 ~~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~--------l~~fV~~SS~s~~~ 923 (1392)
++.+ +.+|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+.+.+ .++||++||+++..
T Consensus 83 ~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~ 162 (286)
T PRK07791 83 VDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ 162 (286)
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc
Confidence 9998 67899999999999988889999999999999999999999998887654321 26999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEcc
Q psy1119 924 GNAGQTNYGMANSIMERICEARRAE----GLPGLAVEWG 958 (1392)
Q Consensus 924 G~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g 958 (1392)
+.++++.|+++|+++++|++..+.+ |..+.+|..|
T Consensus 163 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg 201 (286)
T PRK07791 163 GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA 201 (286)
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC
Confidence 9999999999999999999998776 5555566554
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.9e-20 Score=216.45 Aligned_cols=177 Identities=21% Similarity=0.223 Sum_probs=149.0
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
..++++|||||+||||+++|++|+++|++ |++..|+.. ...+...++++..|.++..+.||+++.++++++++.+.+
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~-Vv~~~~~~~--~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~ 86 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGAT-VVVNDVASA--LDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG 86 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCch--hHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 36799999999999999999999999997 666666532 223344566667788999999999999999999999844
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC---------CCeEEEecccccccCCCCCh
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT---------LGQFVVFSSVSCGRGNAGQT 929 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~---------l~~fV~~SS~s~~~G~~gq~ 929 (1392)
+|+||+||||||+..+..+.+++.++|++++++|+.|++++.+++.+++.. .++||++||.++..+.++++
T Consensus 87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 166 (306)
T PRK07792 87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQA 166 (306)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCc
Confidence 999999999999999989999999999999999999999998876543321 26899999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHc----CCCeEEEEcc
Q psy1119 930 NYGMANSIMERICEARRAE----GLPGLAVEWG 958 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~----Glp~~ai~~g 958 (1392)
+|+++|+++++|++..+.+ |+.+.+|..|
T Consensus 167 ~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg 199 (306)
T PRK07792 167 NYGAAKAGITALTLSAARALGRYGVRANAICPR 199 (306)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC
Confidence 9999999999999988775 4444444444
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.8e-20 Score=211.77 Aligned_cols=178 Identities=22% Similarity=0.177 Sum_probs=154.5
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.. ...+..++++..|.++..+.||++|.++++++++++ +.
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~-Vv~~~r~~~---~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGAR-VVLGDVDKP---GLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL 80 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 788888742 233445666677888999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-C--CCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-T--LGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~--l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+|+||+||||||+...+.+.+++.++|++.+++|+.|++++.+++.+.+. . .++||++||+++..+.++++.|+++|
T Consensus 81 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 160 (275)
T PRK05876 81 LGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAK 160 (275)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHH
Confidence 89999999999998888999999999999999999999999998866542 2 47899999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |+...++..|.+.
T Consensus 161 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~ 190 (275)
T PRK05876 161 YGVVGLAETLAREVTADGIGVSVLCPMVVE 190 (275)
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEeCccc
Confidence 9999998887754 6777788776653
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=214.05 Aligned_cols=165 Identities=22% Similarity=0.195 Sum_probs=147.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.. ..++..++++..|.++.++.+|++|.++++++++++ +.
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~-Vvl~~R~~~---~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGAR-LVLAARDEE---ALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF 81 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCE-EEEEECCHH---HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence 5689999999999999999999999997 888899742 334445666677889999999999999999999998 55
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|+||++|||||+...+.+.+.+.++|++++++|+.|++++.+++.+++. ..+.||++||+++..+.++++.|+++|+
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKa 161 (330)
T PRK06139 82 GGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKF 161 (330)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHH
Confidence 79999999999999888999999999999999999999999888765542 3489999999999999999999999999
Q ss_pred HHHHHHHHHHHc
Q psy1119 937 IMERICEARRAE 948 (1392)
Q Consensus 937 ~ld~la~~r~~~ 948 (1392)
++.+|++..+.+
T Consensus 162 al~~~~~sL~~E 173 (330)
T PRK06139 162 GLRGFSEALRGE 173 (330)
T ss_pred HHHHHHHHHHHH
Confidence 999999998876
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.4e-20 Score=209.90 Aligned_cols=176 Identities=16% Similarity=0.182 Sum_probs=151.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++|++|||||++|||+++|+.|+++|++ |++++|+.. + ...+.++..|.++.++.+|++++++++++++++ +.
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~-vv~~~~~~~--~---~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGAD-IVGVGVAEA--P---ETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEV 80 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCchH--H---HHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999999997 777787631 1 223344556788999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-C--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC-P--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+|+||++|||||+....++.+++.++|+++++.|+.|++++.+++.+.+ + ..++||++||+++..+.++++.|+++|
T Consensus 81 ~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK 160 (251)
T PRK12481 81 MGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASK 160 (251)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHH
Confidence 8999999999999888889999999999999999999999999886654 2 247999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |..+.+|..|.+.
T Consensus 161 ~a~~~l~~~la~e~~~~girvn~v~PG~v~ 190 (251)
T PRK12481 161 SAVMGLTRALATELSQYNINVNAIAPGYMA 190 (251)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEecCCCc
Confidence 9999999988775 5666777777653
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.2e-19 Score=209.21 Aligned_cols=176 Identities=21% Similarity=0.213 Sum_probs=150.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.. ..+...+++.. +.++..++||++|.++++++++++ +.
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~---~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAK-LALVDLEEA---ELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVER 82 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999996 888888742 22333344432 567788889999999999999998 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-CCCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC-PTLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+|+||+||||||+....++.+.+.++|++++++|+.|++++.+++.+.+ ...++||++||+++..+.++++.|+++|++
T Consensus 83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 162 (296)
T PRK05872 83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAG 162 (296)
T ss_pred cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCchHHHHHHHH
Confidence 8999999999999888999999999999999999999999998886644 345899999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++|++.++.+ |....++..|.+
T Consensus 163 l~~~~~~l~~e~~~~gi~v~~v~Pg~v 189 (296)
T PRK05872 163 VEAFANALRLEVAHHGVTVGSAYLSWI 189 (296)
T ss_pred HHHHHHHHHHHHHHHCcEEEEEecCcc
Confidence 99999988754 566666666655
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-19 Score=204.81 Aligned_cols=179 Identities=16% Similarity=0.120 Sum_probs=152.1
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||++|||+++|++|+++|++ |++++|+.. .......+.++..|.++..+.+|++++++++++++++ +
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~-v~~~~r~~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 82 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGAD-VALFDLRTD--DGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA 82 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCcc--hHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 777787642 2233445566666778889999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCC--ChhHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAG--QTNYGM 933 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~g--q~~Yaa 933 (1392)
.+++||+||||||+....++.+.+.++|++.++.|+.|++++.+++.+.+. ..++||++||+++..+.++ ++.|++
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~ 162 (254)
T PRK06114 83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNA 162 (254)
T ss_pred HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHH
Confidence 689999999999998888899999999999999999999999888765442 3479999999999988765 799999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+|+++++|++..+.+ |++..+|..|.+
T Consensus 163 sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i 193 (254)
T PRK06114 163 SKAGVIHLSKSLAMEWVGRGIRVNSISPGYT 193 (254)
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEeecCc
Confidence 999999999988764 677777777765
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-19 Score=207.65 Aligned_cols=179 Identities=15% Similarity=0.192 Sum_probs=148.9
Q ss_pred CCCeEEEEcCc--chHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 780 SNKSYIICGGL--GGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 780 ~~~~ylItGG~--gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
.+++++||||+ +|||+++|+.|+++|++ |++++|+....+..++..++++ +.++..++||++|+++++++++++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~ 82 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAK-LVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFETIK 82 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHHHH
Confidence 57899999997 89999999999999997 7777776422222333333332 567888999999999999999998
Q ss_pred hhcCCccEEEECcccCC----CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHH
Q psy1119 857 NKLGPVDGIFNLAVVLK----DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~----d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
+++|+||++|||||+.. ..++.+.+.++|...++.|+.+.+++.+++.+++.+.+.||++||+++..+.++.+.|+
T Consensus 83 ~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~ 162 (257)
T PRK08594 83 EEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMG 162 (257)
T ss_pred HhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCCchhH
Confidence 67899999999999864 25778999999999999999999999988877766668999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++|+++.+|++..+.+ |..+.+|..|.+.
T Consensus 163 asKaal~~l~~~la~el~~~gIrvn~v~PG~v~ 195 (257)
T PRK08594 163 VAKASLEASVKYLANDLGKDGIRVNAISAGPIR 195 (257)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCEEeeeecCccc
Confidence 9999999999998875 4556666666553
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-19 Score=209.05 Aligned_cols=175 Identities=14% Similarity=0.127 Sum_probs=145.4
Q ss_pred CCCeEEEEcCc--chHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHH-hcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 780 SNKSYIICGGL--GGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIW-KSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 780 ~~~~ylItGG~--gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l-~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
.+|++|||||+ +|||+++|+.|+++|++ |++++|+.. ..+.++.+ +..|.. .+++||++|.++++++++++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~-Vil~~r~~~----~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i 77 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAE-LAFTYLNEA----LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESL 77 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEEecCHH----HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHH
Confidence 47899999997 89999999999999996 788888731 11122222 223444 57899999999999999998
Q ss_pred -hhcCCccEEEECcccCC----CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhH
Q psy1119 857 -NKLGPVDGIFNLAVVLK----DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~----d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
+++|+||++|||||+.. ..++.+++.++|+++++.|+.|++++.+++.+++.+.+.||++||+++..+.++++.|
T Consensus 78 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~~Y 157 (274)
T PRK08415 78 KKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNVM 157 (274)
T ss_pred HHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcchhh
Confidence 67899999999999864 3678999999999999999999999999887777666899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 932 GMANSIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
+++|+++.+|++..+.+. ..+.+|..|.+
T Consensus 158 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v 190 (274)
T PRK08415 158 GVAKAALESSVRYLAVDLGKKGIRVNAISAGPI 190 (274)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcc
Confidence 999999999999988764 44555655554
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.2e-19 Score=191.51 Aligned_cols=178 Identities=41% Similarity=0.684 Sum_probs=156.9
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g 860 (1392)
++++||||+||||++++++|+++|+.++++++|+..........++.++..|.++..+.+|++++++++++++++ ..++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 579999999999999999999999977888888764433322234566667888999999999999999999988 5689
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHH
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMER 940 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~ 940 (1392)
+||+|||+||+.....+.+.+.++|+..+++|+.|+.++.+++... ..+.||++||.++..+.++...|+++|++++.
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~ 158 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL--PLDFFVLFSSVAGVLGNPGQANYAAANAFLDA 158 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC--CcceEEEEccHHHhcCCCCchhhHHHHHHHHH
Confidence 9999999999987778899999999999999999999999987542 55899999999999999999999999999999
Q ss_pred HHHHHHHcCCCeEEEEccccC
Q psy1119 941 ICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 941 la~~r~~~Glp~~ai~~g~~~ 961 (1392)
++++++..|.|+++++||++.
T Consensus 159 ~~~~~~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 159 LAAHRRARGLPATSINWGAWA 179 (180)
T ss_pred HHHHHHhcCCceEEEeecccc
Confidence 999999999999999999875
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-19 Score=207.33 Aligned_cols=177 Identities=18% Similarity=0.146 Sum_probs=149.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-CCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-YDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
.++++|||||++|||+++|+.|+++|++ |++++|+..+ .+...++++. .+.++.++.+|++|+++++++++++.+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~-V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~ 82 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGAD-VILLSRNEEN---LKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN 82 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh
Confidence 5789999999999999999999999997 8888987432 2223333332 367888999999999999999999877
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|++|++|||||+.....+.+++.++|++.++.|+.|.+++.+++.+.+. ..+.+|++||+++..+.++.+.|+++|+
T Consensus 83 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKa 162 (263)
T PRK08339 83 IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRI 162 (263)
T ss_pred hCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHH
Confidence 89999999999998888899999999999999999999999888766553 3479999999999999999999999999
Q ss_pred HHHHHHHHHHHcCC----CeEEEEcccc
Q psy1119 937 IMERICEARRAEGL----PGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~Gl----p~~ai~~g~~ 960 (1392)
++.+|++..+.+.. .+.+|..|.+
T Consensus 163 al~~l~~~la~el~~~gIrVn~v~PG~v 190 (263)
T PRK08339 163 SMAGLVRTLAKELGPKGITVNGIMPGII 190 (263)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeCcC
Confidence 99999999888744 3455555554
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-19 Score=208.79 Aligned_cols=175 Identities=18% Similarity=0.190 Sum_probs=144.6
Q ss_pred CCCeEEEEcCcc--hHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHH-hcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 780 SNKSYIICGGLG--GFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIW-KSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 780 ~~~~ylItGG~g--GiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l-~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
++|++|||||++ |||+++|+.|+++|++ |++++|+... . +.++.+ +..|. ...++||++|.++++++++++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~-V~~~~r~~~~---~-~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~ 79 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAE-LAFTYQGEAL---G-KRVKPLAESLGS-DFVLPCDVEDIASVDAVFEAL 79 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCE-EEEecCchHH---H-HHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHH
Confidence 578999999997 9999999999999997 7778886321 1 112222 23343 346899999999999999998
Q ss_pred -hhcCCccEEEECcccCCC----ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhH
Q psy1119 857 -NKLGPVDGIFNLAVVLKD----ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d----~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
+++|+||++|||||+... .++.+++.++|+++++.|+.|++++.+++.+++...+.||++||+++..+.++++.|
T Consensus 80 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y 159 (271)
T PRK06505 80 EKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNVM 159 (271)
T ss_pred HHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCccchh
Confidence 678999999999998653 578899999999999999999999998887766555899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 932 GMANSIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
+++|+++.+|++..+.+. ..+.+|..|.+
T Consensus 160 ~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i 192 (271)
T PRK06505 160 GVAKAALEASVRYLAADYGPQGIRVNAISAGPV 192 (271)
T ss_pred hhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCc
Confidence 999999999999998874 44556666554
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.9e-19 Score=209.53 Aligned_cols=180 Identities=16% Similarity=0.156 Sum_probs=153.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++.+|+... ...+...+.++..|.++.++.||+++.++++++++++ +.
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~-Vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGAD-VAISYLPVEE-EDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEecCCcch-hhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999997 7777765322 1222333444556778889999999999999999998 67
Q ss_pred cCCccEEEECcccC-CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~-~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+++||++|||||.. ....+.+++.++|++.+++|+.|++++.+++.+++...+.||++||+++..+.+++..|+++|++
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKaa 205 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAA 205 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHHH
Confidence 89999999999974 34678899999999999999999999999887766556899999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++.|++..+.+ |.++.+|..|.+.
T Consensus 206 l~~l~~~la~el~~~gIrvn~i~PG~v~ 233 (294)
T PRK07985 206 ILNYSRGLAKQVAEKGIRVNIVAPGPIW 233 (294)
T ss_pred HHHHHHHHHHHHhHhCcEEEEEECCcCc
Confidence 99999988765 7888888888764
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.7e-19 Score=205.18 Aligned_cols=175 Identities=17% Similarity=0.228 Sum_probs=149.3
Q ss_pred CCCeEEEEcCc--chHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 780 SNKSYIICGGL--GGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 780 ~~~~ylItGG~--gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
.+|+++||||+ +|||+++|+.|+++|++ |++++|+. .....++++. +.++.+++||++++++++++++.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~-Vi~~~r~~----~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~ 78 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGAT-VIYTYQND----RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIK 78 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEecCch----HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHH
Confidence 57899999999 89999999999999997 78888872 1222333333 235788999999999999999998
Q ss_pred hhcCCccEEEECcccCCC----ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHH
Q psy1119 857 NKLGPVDGIFNLAVVLKD----ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d----~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
+++|+||++|||||+... .++.+++.++|+..++.|+.|++++.+++.+++.+.+.+|++||+++..+.++++.|+
T Consensus 79 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~ 158 (252)
T PRK06079 79 ERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMG 158 (252)
T ss_pred HHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcchhhH
Confidence 678999999999998653 6788999999999999999999999998877766668999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++|+++.+|++..+.+ |..+.+|..|.+.
T Consensus 159 asKaal~~l~~~la~el~~~gI~vn~i~PG~v~ 191 (252)
T PRK06079 159 IAKAALESSVRYLARDLGKKGIRVNAISAGAVK 191 (252)
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecCccc
Confidence 9999999999998876 5556777777764
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.6e-19 Score=206.25 Aligned_cols=179 Identities=17% Similarity=0.156 Sum_probs=148.1
Q ss_pred CCCeEEEEcCc--chHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 780 SNKSYIICGGL--GGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 780 ~~~~ylItGG~--gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
.+++++||||+ +|||+++|+.|+++|++ |++..|+.... .....+++++..+.++.++.||++|+++++++++.+
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~-v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 82 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAE-LGITYLPDEKG-RFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK 82 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEEecCcccc-hHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence 57899999986 89999999999999998 66666653221 122334455544556778899999999999999998
Q ss_pred hhcCCccEEEECcccCCC----ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHH
Q psy1119 857 NKLGPVDGIFNLAVVLKD----ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d----~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
+++|+||.+|||||+... .++.+++.++|+++++.|+.|++++.+++.+.+.+.+.||++||+++..+.++.+.|+
T Consensus 83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~ 162 (258)
T PRK07370 83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVMG 162 (258)
T ss_pred HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcccchhh
Confidence 678999999999998643 5788999999999999999999999998877665568999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 933 MANSIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 933 aana~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
++|+++.+|++..+.+. ..+.+|..|.+
T Consensus 163 asKaal~~l~~~la~el~~~gI~Vn~i~PG~v 194 (258)
T PRK07370 163 VAKAALEASVRYLAAELGPKNIRVNAISAGPI 194 (258)
T ss_pred HHHHHHHHHHHHHHHHhCcCCeEEEEEecCcc
Confidence 99999999999998774 33555655555
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.7e-19 Score=200.82 Aligned_cols=182 Identities=19% Similarity=0.195 Sum_probs=152.3
Q ss_pred CCCeEEEEcCc--chHHHHHHHHHHHhCCceEEEecCCCc--------ccHHHHHHHHHHhcCCceEEEEeccCCCHHHH
Q psy1119 780 SNKSYIICGGL--GGFGLELADWLVLRGARKLVLTSRSGV--------KNGYQALRIKIWKSYDVQVLISTDDITTEAGV 849 (1392)
Q Consensus 780 ~~~~ylItGG~--gGiG~~lA~~La~~GAr~lvl~sRs~~--------~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v 849 (1392)
.++++|||||+ +|||+++|++|+++|++ |+++.|+.. ......+..++++..|.++.+++||+++.+++
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~-vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i 83 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGAD-IFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP 83 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCe-EEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 57899999998 49999999999999998 665543210 11222234455667788999999999999999
Q ss_pred HHHHHHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCC
Q psy1119 850 VNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNA 926 (1392)
Q Consensus 850 ~~l~~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~ 926 (1392)
+++++.+ +.+|+||++|||||.....++.+++.++|++.++.|+.|.+++.+++.+.+. ..++||++||.++..+.+
T Consensus 84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 163 (256)
T PRK12859 84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMV 163 (256)
T ss_pred HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCC
Confidence 9999998 6689999999999998888899999999999999999999999877755443 357999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 927 GQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 927 gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
+++.|+++|+++++|++..+.+ |..+.+|.+|.+..
T Consensus 164 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t 203 (256)
T PRK12859 164 GELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDT 203 (256)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccC
Confidence 9999999999999998887664 67788888887743
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.4e-19 Score=203.69 Aligned_cols=177 Identities=19% Similarity=0.143 Sum_probs=150.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS--YDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~--~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.. ..+...++++. .+.++.++.||++++++++++++++
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~-vv~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 81 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAA-VALADLDAA---LAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAE 81 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 4789999999999999999999999997 888888743 23334445544 4678889999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
++++++|++|||||+.....+.+.+.++|++.+++|+.|++++.+++.+.+. ..+.||++||.++..+.++...|+++
T Consensus 82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 161 (260)
T PRK07063 82 EAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVA 161 (260)
T ss_pred HHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHH
Confidence 6789999999999988777788899999999999999999999998866542 34799999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
|+++++|++..+.+ |..+.+|..|.+
T Consensus 162 Kaa~~~~~~~la~el~~~gIrvn~v~PG~v 191 (260)
T PRK07063 162 KHGLLGLTRALGIEYAARNVRVNAIAPGYI 191 (260)
T ss_pred HHHHHHHHHHHHHHhCccCeEEEEEeeCCc
Confidence 99999999998766 455666666654
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.1e-19 Score=206.62 Aligned_cols=180 Identities=19% Similarity=0.183 Sum_probs=154.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |+++.|+... .......+.++..|.++.++.||+++.++++++++++ +.
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~-V~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGAD-IALNYLPEEE-QDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCE-EEEEeCCcch-HHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 6666665322 2233445566667888999999999999999999998 67
Q ss_pred cCCccEEEECcccC-CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~-~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+++||+||||||.. ....+.+++.++|++.+++|+.|++++.+++.+.+...+.||++||+++..+.+++..|+++|++
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK~a 211 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAA 211 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHHHH
Confidence 89999999999975 34678999999999999999999999999887766666899999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++|++..+.+ |.++.+|..|.+.
T Consensus 212 ~~~~~~~la~el~~~gI~v~~v~PG~i~ 239 (300)
T PRK06128 212 IVAFTKALAKQVAEKGIRVNAVAPGPVW 239 (300)
T ss_pred HHHHHHHHHHHhhhcCcEEEEEEECcCc
Confidence 99999988765 7778888887764
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4e-19 Score=202.34 Aligned_cols=177 Identities=20% Similarity=0.193 Sum_probs=150.5
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||+++|++|+++|++ |++++|+.. ......+.++..|.++.++.||++++++++++++++ ++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~-v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAK-VVVGARRQA---ELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER 80 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999999996 888899853 233445566667788999999999999999999998 67
Q ss_pred cCCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccc-cCCCCChhHHHH
Q psy1119 859 LGPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCG-RGNAGQTNYGMA 934 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~-~G~~gq~~Yaaa 934 (1392)
+++||++|||||+.. ..++.+.+.++|++.+++|+.|++++.+++.+.+. +.+.||++||.++. .+.++++.|+++
T Consensus 81 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~s 160 (254)
T PRK07478 81 FGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAAS 160 (254)
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHH
Confidence 899999999999864 46788999999999999999999999888766442 34789999999887 578999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
|+++++|++..+.+ |..+.+|..|.+
T Consensus 161 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v 190 (254)
T PRK07478 161 KAGLIGLTQVLAAEYGAQGIRVNALLPGGT 190 (254)
T ss_pred HHHHHHHHHHHHHHHhhcCEEEEEEeeCcc
Confidence 99999999988776 455667777765
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.2e-19 Score=202.96 Aligned_cols=176 Identities=16% Similarity=0.162 Sum_probs=144.6
Q ss_pred CCCeEEEEcCcc--hHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 780 SNKSYIICGGLG--GFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 780 ~~~~ylItGG~g--GiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
.++++|||||++ |||+++|+.|+++|++ |++.+|+. + .....+++...+..+..+.||++|+++++++++++
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~-vil~~r~~-~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 79 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQND-K---LKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELG 79 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCE-EEEEecch-h---HHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHH
Confidence 578999999985 9999999999999997 78888862 1 12233444443335677899999999999999998
Q ss_pred hhcCCccEEEECcccCCCc-----cccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhH
Q psy1119 857 NKLGPVDGIFNLAVVLKDA-----LFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~-----~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
+.+|+||++|||||+.... .+.+++.++|+..++.|+.|.+.+.+++.+++.+.+.||++||+++..+.++.+.|
T Consensus 80 ~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y 159 (262)
T PRK07984 80 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVM 159 (262)
T ss_pred hhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcchh
Confidence 6689999999999986432 26788999999999999999999999887765556899999999999899999999
Q ss_pred HHHHHHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 932 GMANSIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
+++|+++.+|++..+.+. ..+.+|..|.+
T Consensus 160 ~asKaal~~l~~~la~el~~~gIrVn~i~PG~v 192 (262)
T PRK07984 160 GLAKASLEANVRYMANAMGPEGVRVNAISAGPI 192 (262)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEeeeecCcc
Confidence 999999999999998864 44555555554
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.4e-19 Score=202.60 Aligned_cols=178 Identities=17% Similarity=0.190 Sum_probs=151.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC--CceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY--DVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~--G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
.+++++||||++|||+++|++|+++|++ |++++|+..+.. ...+++... +.++..+.+|++|.++++++++++
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGAS-VAICGRDEERLA---SAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE 82 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHH---HHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 5789999999999999999999999997 888899853322 223333332 468889999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+.+++||++|||||+....++.+.+.++|.+.++.|+.+.+++.+++.+.+. ..++||++||+++..+.+++..|+++
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~as 162 (265)
T PRK07062 83 ARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAA 162 (265)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHH
Confidence 6789999999999998888999999999999999999999999988876553 24799999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++.+|++..+.+ |..+.+|..|.+.
T Consensus 163 Kaal~~~~~~la~e~~~~gi~v~~i~PG~v~ 193 (265)
T PRK07062 163 RAGLLNLVKSLATELAPKGVRVNSILLGLVE 193 (265)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence 99999999987765 5667777777653
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.3e-19 Score=203.55 Aligned_cols=176 Identities=21% Similarity=0.204 Sum_probs=150.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||++|||+++|+.|+++|++ |++++|+ . ......++++..+.++..+.||+++.++++++++++ +.
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~-vi~~~r~-~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAY-VLAVDIA-E---AVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQ 79 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCc-H---HHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 7888887 2 233445555666778999999999999999999998 67
Q ss_pred cCCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMC-PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|+||++|||||+.. ...+.+.+.++|+++++.|+.|++++.+++.+.+ ...++||++||.++..+.++.+.|+++|+
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 159 (272)
T PRK08589 80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLYRSGYNAAKG 159 (272)
T ss_pred cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCCCchHHHHHH
Confidence 899999999999864 4678899999999999999999999998876654 23479999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++.|++..+.+ |..+.+|..|.+
T Consensus 160 al~~l~~~la~e~~~~gI~v~~v~PG~v 187 (272)
T PRK08589 160 AVINFTKSIAIEYGRDGIRANAIAPGTI 187 (272)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCcc
Confidence 999999988765 555666666655
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.7e-19 Score=199.95 Aligned_cols=180 Identities=20% Similarity=0.274 Sum_probs=151.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++++||||+||||+++|++|+++|++.+++..|+. ......+++++..|.++..+.||++|.++++++++++ +.
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNS---PRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE 78 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCCh---HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999998444444432 2233455666667888999999999999999999988 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+++||+||||||...+.++.+.+.++|++.+++|+.|++++.+++.+.+. ..++||++||.++..+.++++.|+++|+
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~ 158 (246)
T PRK12938 79 VGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKA 158 (246)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHH
Confidence 89999999999998888899999999999999999999999888766443 3479999999999999999999999999
Q ss_pred HHHHHHHHHHH----cCCCeEEEEccccCc
Q psy1119 937 IMERICEARRA----EGLPGLAVEWGAVGE 962 (1392)
Q Consensus 937 ~ld~la~~r~~----~Glp~~ai~~g~~~~ 962 (1392)
+++.|++..+. .|++..+|.+|.+..
T Consensus 159 a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t 188 (246)
T PRK12938 159 GIHGFTMSLAQEVATKGVTVNTVSPGYIGT 188 (246)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEEecccCC
Confidence 99888877654 477788888887643
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-18 Score=196.63 Aligned_cols=179 Identities=22% Similarity=0.235 Sum_probs=152.4
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||.++|++|+++|++.+++..|+. +..++..+.++..|.++.+++||+++++++.++++++ +.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSK---EAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH 81 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcH---HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999998544334432 2233445666677888999999999999999999998 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+++||+||||||...+..+.+.+.++|++.+++|+.+++++.+++.+.+ ...++||++||+++..|.++.+.|+++|+
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 161 (247)
T PRK12935 82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKA 161 (247)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHH
Confidence 8999999999999888888899999999999999999999998886554 23479999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++.+++..+.+ |.+..++.+|.+.
T Consensus 162 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~ 190 (247)
T PRK12935 162 GMLGFTKSLALELAKTNVTVNAICPGFID 190 (247)
T ss_pred HHHHHHHHHHHHHHHcCcEEEEEEeCCCc
Confidence 999999887665 7888888888764
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5e-19 Score=201.35 Aligned_cols=180 Identities=21% Similarity=0.240 Sum_probs=150.9
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
+++++||||+||||+++|++|+++|++ |++++|+... .+...+.++..+.++.+++||++++++++++++++ +.+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~-Vi~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGAN-VVITGRTKEK---LEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF 76 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 478999999999999999999999995 8888888432 23333445555667889999999999999999998 678
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-C--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC-P--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+++|+||||||.....++.+++.++|++.++.|+.|++++.+++.+.+ . ..++||++||+++..+.++++.|+++|+
T Consensus 77 ~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKa 156 (252)
T PRK07677 77 GRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKA 156 (252)
T ss_pred CCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHH
Confidence 999999999998766788999999999999999999999998886543 2 2489999999999999999999999999
Q ss_pred HHHHHHHHHHHc-----CCCeEEEEccccCccc
Q psy1119 937 IMERICEARRAE-----GLPGLAVEWGAVGEVG 964 (1392)
Q Consensus 937 ~ld~la~~r~~~-----Glp~~ai~~g~~~~~G 964 (1392)
+++.|++..+.+ |.+..+|..|.+...+
T Consensus 157 a~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~ 189 (252)
T PRK07677 157 GVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTG 189 (252)
T ss_pred HHHHHHHHHHHHhCcccCeEEEEEeeccccccc
Confidence 999999976554 5566777777765433
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.7e-18 Score=195.92 Aligned_cols=179 Identities=19% Similarity=0.221 Sum_probs=151.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++++||||+||||+++|++|+++|++ ++++.|+.. .......+.++..+.++.++.||+++.++++++++++ +.
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~-v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFA-VAVNYAGSA--AAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999997 555555532 2233445566667888999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
++++|+||||||+....++.+.+.++|+++++.|+.|++++.+++.+.+...++||++||.++..+.++++.|+++|+++
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 160 (245)
T PRK12937 81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAV 160 (245)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHHHHHHH
Confidence 89999999999998888889999999999999999999998887766555557999999999999999999999999999
Q ss_pred HHHHHHHHHc----CCCeEEEEccccC
Q psy1119 939 ERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 939 d~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+.+++..+.+ |+...++..|.+.
T Consensus 161 ~~~~~~~a~~~~~~~i~v~~i~pg~~~ 187 (245)
T PRK12937 161 EGLVHVLANELRGRGITVNAVAPGPVA 187 (245)
T ss_pred HHHHHHHHHHhhhcCeEEEEEEeCCcc
Confidence 9999987654 5666777776553
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.5e-19 Score=201.75 Aligned_cols=176 Identities=13% Similarity=0.132 Sum_probs=145.1
Q ss_pred CCCeEEEEcCc--chHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 780 SNKSYIICGGL--GGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 780 ~~~~ylItGG~--gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
.+|++|||||+ +|||+++|+.|+++|++ |++++|+....+..++..+++ + .+.+++||++|.++++++++.+
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~-v~l~~r~~~~~~~~~~~~~~~---~-~~~~~~~D~~~~~~v~~~~~~~~ 83 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAE-LAVTYLNDKARPYVEPLAEEL---D-APIFLPLDVREPGQLEAVFARIA 83 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHHHhh---c-cceEEecCcCCHHHHHHHHHHHH
Confidence 57999999998 59999999999999997 888888742211122222222 2 3467899999999999999998
Q ss_pred hhcCCccEEEECcccCC----CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHH
Q psy1119 857 NKLGPVDGIFNLAVVLK----DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~----d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
+++|+||.+|||||+.. ..++.+++.++|++++++|+.|++++.+++.+++.+.+.+|++||.++..+.++.+.|+
T Consensus 84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~~~~Y~ 163 (258)
T PRK07533 84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYNLMG 163 (258)
T ss_pred HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCccchhhH
Confidence 67899999999999864 25788999999999999999999999998877766668999999999998899999999
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++|+++.+|++..+.+ |....+|..|.+
T Consensus 164 asKaal~~l~~~la~el~~~gI~Vn~v~PG~v 195 (258)
T PRK07533 164 PVKAALESSVRYLAAELGPKGIRVHAISPGPL 195 (258)
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecCCc
Confidence 9999999999998876 455566666655
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.8e-19 Score=202.48 Aligned_cols=175 Identities=13% Similarity=0.159 Sum_probs=144.4
Q ss_pred CCCeEEEEcCc--chHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHh-cCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 780 SNKSYIICGGL--GGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK-SYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 780 ~~~~ylItGG~--gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~-~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
.++++|||||+ +|||+++|+.|+++|++ |++++|+.. ..+.++++. ..|. +..++||++|+++++++++++
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~~-V~l~~r~~~----~~~~~~~l~~~~~~-~~~~~~Dl~~~~~v~~~~~~~ 82 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGAE-LAFTYQGDA----LKKRVEPLAAELGA-FVAGHCDVTDEASIDAVFETL 82 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCchH----HHHHHHHHHHhcCC-ceEEecCCCCHHHHHHHHHHH
Confidence 57899999997 89999999999999997 777777621 112222232 2243 456899999999999999998
Q ss_pred -hhcCCccEEEECcccCCC----ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhH
Q psy1119 857 -NKLGPVDGIFNLAVVLKD----ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d----~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
+++|+||++|||||+... .++.+++.++|+++++.|+.|++++.+++.+++.+.+.+|++||+++..+.++.+.|
T Consensus 83 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y 162 (272)
T PRK08159 83 EKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVM 162 (272)
T ss_pred HHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhh
Confidence 678999999999998652 578899999999999999999999999887776666899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 932 GMANSIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
+++|+++.+|++..+.+. ..+.+|..|.+
T Consensus 163 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v 195 (272)
T PRK08159 163 GVAKAALEASVKYLAVDLGPKNIRVNAISAGPI 195 (272)
T ss_pred hhHHHHHHHHHHHHHHHhcccCeEEEEeecCCc
Confidence 999999999999998874 34455555554
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.2e-19 Score=201.56 Aligned_cols=175 Identities=17% Similarity=0.202 Sum_probs=144.2
Q ss_pred CCCeEEEEcCcc--hHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-CCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 780 SNKSYIICGGLG--GFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-YDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 780 ~~~~ylItGG~g--GiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
.+|++|||||++ |||+++|+.|+++|++ |++..|+. . ..+.++++.. .|.. ..++||++|+++++++++.+
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~-v~~~~r~~-~---~~~~~~~l~~~~g~~-~~~~~Dv~~~~~v~~~~~~~ 80 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAE-LWFTYQSE-V---LEKRVKPLAEEIGCN-FVSELDVTNPKSISNLFDDI 80 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCE-EEEEeCch-H---HHHHHHHHHHhcCCc-eEEEccCCCHHHHHHHHHHH
Confidence 578999999997 9999999999999997 77777762 1 1222333332 2543 46789999999999999998
Q ss_pred -hhcCCccEEEECcccCC----CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhH
Q psy1119 857 -NKLGPVDGIFNLAVVLK----DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~----d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
+++|+||++|||||+.. ..++.+++.++|+++++.|+.|++++.+.+.+++.+.+.+|++||.++..+.++++.|
T Consensus 81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y 160 (260)
T PRK06603 81 KEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVM 160 (260)
T ss_pred HHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcccch
Confidence 67999999999999864 2578899999999999999999999999887666666899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 932 GMANSIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
+++|+++.+|++..+.+. ..+.+|..|.+
T Consensus 161 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v 193 (260)
T PRK06603 161 GVAKAALEASVKYLANDMGENNIRVNAISAGPI 193 (260)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcC
Confidence 999999999999988763 44455555554
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.8e-19 Score=200.15 Aligned_cols=176 Identities=15% Similarity=0.179 Sum_probs=150.1
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
+++++||||+||||+++|++|+++|++ |++++|+.. ..+....+++..+.++..+.||++++++++++++++ +++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~-v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 77 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFK-VAIVDYNEE---TAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTF 77 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 579999999999999999999999996 888888742 233344555666778889999999999999999998 678
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++||+||||||+....++.+.+.++|++++++|+.|++++.+++.+.+. ..+.||++||.++..|.+++..|+++|+
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 157 (256)
T PRK08643 78 GDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKF 157 (256)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHH
Confidence 9999999999998888899999999999999999999998887755442 2368999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++.|++..+.+ |....+|..|.+
T Consensus 158 a~~~~~~~la~e~~~~gi~v~~i~Pg~v 185 (256)
T PRK08643 158 AVRGLTQTAARDLASEGITVNAYAPGIV 185 (256)
T ss_pred HHHHHHHHHHHHhcccCcEEEEEeeCCC
Confidence 999999988765 555677776655
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.1e-19 Score=208.69 Aligned_cols=177 Identities=22% Similarity=0.192 Sum_probs=151.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||+++|++|+++|++ |++++|+.. ..+...++++..|.++..+.||++|.++++++++.+ ++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~-Vvl~~R~~~---~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAK-VVLLARGEE---GLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHH---HHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999997 888888742 233445566677889999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|+||++|||||+....++.+.+.++|++++++|+.|.+++.+.+.+.+. ..+.||++||+++..+.++++.|+++|+
T Consensus 83 ~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~ 162 (334)
T PRK07109 83 LGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKH 162 (334)
T ss_pred CCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHH
Confidence 99999999999998888899999999999999999999998887766543 3589999999999999999999999999
Q ss_pred HHHHHHHHHHHcC------CCeEEEEcccc
Q psy1119 937 IMERICEARRAEG------LPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~G------lp~~ai~~g~~ 960 (1392)
++++|++..+.+. +....|..|.+
T Consensus 163 a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v 192 (334)
T PRK07109 163 AIRGFTDSLRCELLHDGSPVSVTMVQPPAV 192 (334)
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEEEeCCCc
Confidence 9999999887652 34455555544
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-18 Score=222.60 Aligned_cols=179 Identities=17% Similarity=0.119 Sum_probs=157.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.. ..++..+.++..|.++.++.||++|+++++++++++ +.
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~-v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 389 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAE-VVASDIDEA---AAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE 389 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999999998 888899842 233344555667888999999999999999999998 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC---CCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT---LGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~---l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+|+||+||||||+...+.+.+.+.++|++++++|+.|++++.+++.+.+.+ .++||++||+++..+.++.+.|+++|
T Consensus 390 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 469 (582)
T PRK05855 390 HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSK 469 (582)
T ss_pred cCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHH
Confidence 899999999999998899999999999999999999999999987665422 37999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
+++++|++..+.+ |..+.+|.+|.+..
T Consensus 470 aa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t 500 (582)
T PRK05855 470 AAVLMLSECLRAELAAAGIGVTAICPGFVDT 500 (582)
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEEeCCCcc
Confidence 9999999987765 77889999998754
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.7e-19 Score=199.19 Aligned_cols=178 Identities=16% Similarity=0.239 Sum_probs=153.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.. ......++++..+.++..+.+|+++.++++++++.+ ++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~-vvl~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAE-IIINDITAE---RAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD 83 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCE-EEEEcCCHH---HHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999999996 888888742 233345556666778888999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|+||||||.....++.+.+.++|++.++.|+.|++++.+++.+.+ .+.++||++||+++..|.++.+.|+++|+
T Consensus 84 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 163 (254)
T PRK08085 84 IGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKG 163 (254)
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHH
Confidence 8999999999999877889999999999999999999999998876654 24479999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++.+++..+.+ |....+|..|.+.
T Consensus 164 a~~~~~~~la~e~~~~gi~v~~v~pG~~~ 192 (254)
T PRK08085 164 AVKMLTRGMCVELARHNIQVNGIAPGYFK 192 (254)
T ss_pred HHHHHHHHHHHHHHhhCeEEEEEEeCCCC
Confidence 999999988765 6677777777654
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-18 Score=198.19 Aligned_cols=180 Identities=17% Similarity=0.206 Sum_probs=156.0
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++++++||||+||||+++|++|+++|++ |++++|+. +......++++..|.++..+.||+++++++.++++++ .
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~-v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAH-VLVNGRNA---ATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDA 84 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCe-EEEEeCCH---HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999996 88889974 2233445556667778899999999999999999998 5
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
.+++||+||||||.....++.+.+.++|++.+..|+.|++++.+++.+.+ .+.++||++||.++..+.++++.|+++|
T Consensus 85 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 164 (256)
T PRK06124 85 EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAK 164 (256)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHH
Confidence 68999999999999888889999999999999999999999998886544 2458999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
++++.+++..+.+ |+...+|.+|.+..
T Consensus 165 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t 195 (256)
T PRK06124 165 QGLTGLMRALAAEFGPHGITSNAIAPGYFAT 195 (256)
T ss_pred HHHHHHHHHHHHHHHHhCcEEEEEEECCccC
Confidence 9999999987765 67777887877644
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-18 Score=199.70 Aligned_cols=173 Identities=21% Similarity=0.251 Sum_probs=145.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||+++|++|+++|++ |++++|+... ..+..++ .+.++.++.||++++++++++++.+ +.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~---~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 77 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGAR-VAIVDIDADN---GAAVAAS---LGERARFIATDITDDAAIERAVATVVAR 77 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHH---hCCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999996 8888987421 2222222 2567888999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-CCCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC-PTLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+++||++|||||......+ +.+.++|++.++.|+.|++++.+++.+.+ .+.+.||++||.++..|.++.+.|+++|++
T Consensus 78 ~g~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa 156 (261)
T PRK08265 78 FGRVDILVNLACTYLDDGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAA 156 (261)
T ss_pred hCCCCEEEECCCCCCCCcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHH
Confidence 8999999999998765554 67899999999999999999999887655 455899999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++|++..+.+ |+...+|..|.+
T Consensus 157 ~~~~~~~la~e~~~~gi~vn~v~PG~~ 183 (261)
T PRK08265 157 IRQLTRSMAMDLAPDGIRVNSVSPGWT 183 (261)
T ss_pred HHHHHHHHHHHhcccCEEEEEEccCCc
Confidence 99999988775 455666666543
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.5e-18 Score=197.29 Aligned_cols=175 Identities=23% Similarity=0.205 Sum_probs=149.4
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+... .+.. ....+.++..+.+|++|.+++.++++.+ +.
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~-V~~~~r~~~~---~~~l---~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 75 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHR-VVGTVRSEAA---RADF---EALHPDRALARLLDVTDFDAIDAVVADAEAT 75 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCE-EEEEeCCHHH---HHHH---HhhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999997 8888887421 1111 1123456788899999999999999998 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|+||||||+...+++.+.+.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++|+
T Consensus 76 ~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~ 155 (277)
T PRK06180 76 FGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKF 155 (277)
T ss_pred hCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHH
Confidence 89999999999998888999999999999999999999999998766543 3479999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++++..+.+ |++..+|.+|.+.
T Consensus 156 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~ 184 (277)
T PRK06180 156 ALEGISESLAKEVAPFGIHVTAVEPGSFR 184 (277)
T ss_pred HHHHHHHHHHHHhhhhCcEEEEEecCCcc
Confidence 999998877654 8889999988763
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.3e-19 Score=200.21 Aligned_cols=178 Identities=17% Similarity=0.175 Sum_probs=143.2
Q ss_pred CCCCeEEEEcC--cchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 779 DSNKSYIICGG--LGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 779 ~~~~~ylItGG--~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
..++++||||| ++|||+++|+.|+++|++ |++.+|+. + .....+++.........++||++|+++++++++.+
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~-v~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAE-LAFTYVVD-K---LEERVRKMAAELDSELVFRCDVASDDEINQVFADL 78 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCcH-H---HHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHH
Confidence 35789999997 679999999999999997 77777752 1 12223333332223457899999999999999998
Q ss_pred -hhcCCccEEEECcccCCCc-----cccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCCh
Q psy1119 857 -NKLGPVDGIFNLAVVLKDA-----LFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQT 929 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d~-----~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~ 929 (1392)
+++|+||++|||||+.... .+++++.++|+.+++.|+.+++++.+++.+++. ..+.||++||+++..+.++.+
T Consensus 79 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~~ 158 (261)
T PRK08690 79 GKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYN 158 (261)
T ss_pred HHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCcc
Confidence 6789999999999987532 256789999999999999999999888766553 337899999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 930 NYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
.|+++|+++.+|++..+.+ |..+.+|..|.+.
T Consensus 159 ~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~ 194 (261)
T PRK08690 159 VMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIK 194 (261)
T ss_pred cchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence 9999999999999988765 5556677777663
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-18 Score=198.82 Aligned_cols=177 Identities=14% Similarity=0.167 Sum_probs=150.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
+++++|||||+||||+++|++|+++|++ |++++|+... .+...+.++..+.++.++.||+++++++.++++++ +.
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~-Vi~~~r~~~~---~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGAD-VLIAARTESQ---LDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA 84 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999995 8888998422 23344455555778888999999999999999998 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC---CCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC---PTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~---~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++++|+|||+||+.....+.+.+.++|...+++|+.|++++.+++.+.+ ...+.||++||+++..+.++++.|+++|
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 164 (263)
T PRK07814 85 FGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAK 164 (263)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHH
Confidence 8999999999998878888999999999999999999999999886644 2347899999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCC---eEEEEcccc
Q psy1119 936 SIMERICEARRAEGLP---GLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~Glp---~~ai~~g~~ 960 (1392)
++++++++..+.+..+ +.+|..|.+
T Consensus 165 ~a~~~~~~~~~~e~~~~i~v~~i~Pg~v 192 (263)
T PRK07814 165 AALAHYTRLAALDLCPRIRVNAIAPGSI 192 (263)
T ss_pred HHHHHHHHHHHHHHCCCceEEEEEeCCC
Confidence 9999999998887444 445555544
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-18 Score=198.36 Aligned_cols=178 Identities=16% Similarity=0.143 Sum_probs=152.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++++||||+||||.++|++|+++|++ |++++|+.. ......+.+...+.++.++.+|++++++++++++++ ..
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGAN-VAVASRSQE---KVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE 83 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 6789999999999999999999999997 888888742 222333445555667888999999999999999998 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+++||++|||||.....++.+++.++|++.+++|+.|++++.+++.+.+. ..++||++||.++..+.++++.|+++|++
T Consensus 84 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~~Y~asK~a 163 (264)
T PRK07576 84 FGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAKAG 163 (264)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCccHHHHHHHH
Confidence 89999999999988778889999999999999999999999988865443 34799999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++.|++..+.+ |....++.+|.+.
T Consensus 164 ~~~l~~~la~e~~~~gi~v~~v~pg~~~ 191 (264)
T PRK07576 164 VDMLTRTLALEWGPEGIRVNSIVPGPIA 191 (264)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 99999988765 5667788887664
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-18 Score=198.52 Aligned_cols=178 Identities=16% Similarity=0.115 Sum_probs=149.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.. ..+...++++..|.++..+.+|++++++++++++++ +.
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQ-VAIAARHLD---ALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCHH---HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999999997 888888742 234445556666778889999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-CC--CCeEEEecccccccCC-C-CChhHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC-PT--LGQFVVFSSVSCGRGN-A-GQTNYGM 933 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~~--l~~fV~~SS~s~~~G~-~-gq~~Yaa 933 (1392)
+++||++|||||.....++.+.+.++|++.+++|+.|++++.+++.+.+ +. .+.||++||+++..+. + +.+.|++
T Consensus 84 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~a 163 (253)
T PRK05867 84 LGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCA 163 (253)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHH
Confidence 8999999999999888889999999999999999999999999876544 22 3689999999887654 3 3579999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+|+++++|++..+.+ |....+|..|.+.
T Consensus 164 sKaal~~~~~~la~e~~~~gI~vn~i~PG~v~ 195 (253)
T PRK05867 164 SKAAVIHLTKAMAVELAPHKIRVNSVSPGYIL 195 (253)
T ss_pred HHHHHHHHHHHHHHHHhHhCeEEEEeecCCCC
Confidence 999999999988765 5666777777663
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.3e-18 Score=195.91 Aligned_cols=177 Identities=16% Similarity=0.165 Sum_probs=147.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEec-CCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh-
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTS-RSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN- 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~s-Rs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~- 857 (1392)
.++++|||||+||||+++|+.|+++|++ |++.. |+. +.......+++..|.++..+.+|+++.+++..+++++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGAL-VAIHYGNRK---EEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDN 78 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEEcCCCH---HHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999998 55544 432 22333345555667778889999999999999988763
Q ss_pred ----hcC--CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhH
Q psy1119 858 ----KLG--PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 858 ----~~g--~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
.++ ++|++|||||+....++.+.+.++|+++++.|+.|++++.+++.+.+.+.+.||++||+++..+.++++.|
T Consensus 79 ~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 158 (252)
T PRK12747 79 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAY 158 (252)
T ss_pred HhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhH
Confidence 234 89999999998777788999999999999999999999998887665555899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 932 GMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++|+++++|++..+.+ |....+|..|.+
T Consensus 159 ~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v 191 (252)
T PRK12747 159 SMTKGAINTMTFTLAKQLGARGITVNAILPGFI 191 (252)
T ss_pred HHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCc
Confidence 99999999999987665 666777777765
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.3e-18 Score=197.44 Aligned_cols=178 Identities=18% Similarity=0.233 Sum_probs=154.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||++|||+++|++|+++|++ ++++.|+.. ......+.++..|.++..++||+++.++++++++++ +.
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~-vv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGAT-IVFNDINQE---LVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHH---HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999999998 777787742 233445566667888999999999999999999998 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+++||+||||||+....++.+.+.++|.+.++.|+.|++.+.+++.+.+. ..+.||++||.++..|.++...|+++|+
T Consensus 85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa 164 (265)
T PRK07097 85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKG 164 (265)
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHH
Confidence 89999999999998888999999999999999999999999988866542 4589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++.|++..+.+ |+...+|..|.+.
T Consensus 165 al~~l~~~la~e~~~~gi~v~~v~Pg~v~ 193 (265)
T PRK07097 165 GLKMLTKNIASEYGEANIQCNGIGPGYIA 193 (265)
T ss_pred HHHHHHHHHHHHhhhcCceEEEEEecccc
Confidence 999999988776 5667777777653
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.6e-18 Score=197.31 Aligned_cols=177 Identities=16% Similarity=0.162 Sum_probs=149.2
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||.++|+.|+++|++ |++++|+.. ....+.++..+.++..+++|++|.++++++++++ +
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~-vv~~~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 81 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCD-IVGINIVEP-----TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVA 81 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEecCcch-----HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999997 666776531 1223344455778889999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+++++|++|||||+.....+.+.+.++|++.+++|+.|++++.+++.+.+. ..+.+|++||.++..+.++...|+++
T Consensus 82 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 161 (253)
T PRK08993 82 EFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTAS 161 (253)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHH
Confidence 789999999999998888899999999999999999999999988765442 23689999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++++|++..+.+ |....+|..|.+.
T Consensus 162 Kaa~~~~~~~la~e~~~~gi~v~~v~pG~v~ 192 (253)
T PRK08993 162 KSGVMGVTRLMANEWAKHNINVNAIAPGYMA 192 (253)
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEeeCccc
Confidence 99999999988776 5556666666653
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.6e-18 Score=198.18 Aligned_cols=176 Identities=15% Similarity=0.194 Sum_probs=142.3
Q ss_pred CCCeEEEEcC--cchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHH-hcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 780 SNKSYIICGG--LGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIW-KSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 780 ~~~~ylItGG--~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l-~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
.++++||||| ++|||+++|+.|+++|++ |++++|.....+ .++++ +..|. ...++||++|+++++++++.+
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~ 78 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAE-LAFTYVGDRFKD----RITEFAAEFGS-DLVFPCDVASDEQIDALFASL 78 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCe-EEEEccchHHHH----HHHHHHHhcCC-cceeeccCCCHHHHHHHHHHH
Confidence 5789999996 689999999999999997 777665421111 12222 22232 346889999999999999998
Q ss_pred -hhcCCccEEEECcccCCCc-----cccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChh
Q psy1119 857 -NKLGPVDGIFNLAVVLKDA-----LFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTN 930 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d~-----~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~ 930 (1392)
+++|+||++|||||+.... .+++++.++|+++++.|+.|++++.+++.+++.+.+.+|++||+++..+.++.+.
T Consensus 79 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~~~ 158 (260)
T PRK06997 79 GQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNT 158 (260)
T ss_pred HHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCcch
Confidence 6789999999999986532 3567899999999999999999999998777766689999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 931 YGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++|+++.+|++..+.+ |..+.+|..|.+.
T Consensus 159 Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~ 193 (260)
T PRK06997 159 MGLAKASLEASVRYLAVSLGPKGIRANGISAGPIK 193 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccc
Confidence 999999999999998876 4445666666553
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-18 Score=198.73 Aligned_cols=165 Identities=16% Similarity=0.189 Sum_probs=142.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.... .++..++||++++++++++++++ ++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~-Vi~~~r~~~~~--------------~~~~~~~~D~~~~~~i~~~~~~~~~~ 69 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSN-VINFDIKEPSY--------------NDVDYFKVDVSNKEQVIKGIDYVISK 69 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCcccc--------------CceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999996 78888874221 15778999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+++||+||||||+....++.+.+.++|++++++|+.|++++.+++.+++ ...+.||++||+++..+.++++.|+++|+
T Consensus 70 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa 149 (258)
T PRK06398 70 YGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKH 149 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHH
Confidence 8999999999999888889999999999999999999999999886655 24589999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCC---eEEEEccc
Q psy1119 937 IMERICEARRAEGLP---GLAVEWGA 959 (1392)
Q Consensus 937 ~ld~la~~r~~~Glp---~~ai~~g~ 959 (1392)
+++.|++..+.+..+ ..+|..|.
T Consensus 150 al~~~~~~la~e~~~~i~vn~i~PG~ 175 (258)
T PRK06398 150 AVLGLTRSIAVDYAPTIRCVAVCPGS 175 (258)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEecCC
Confidence 999999998877544 34444443
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.2e-18 Score=194.26 Aligned_cols=181 Identities=17% Similarity=0.183 Sum_probs=152.5
Q ss_pred CCCeEEEEcCc--chHHHHHHHHHHHhCCceEEEecCCCcc--------cHHHHHHHHHHhcCCceEEEEeccCCCHHHH
Q psy1119 780 SNKSYIICGGL--GGFGLELADWLVLRGARKLVLTSRSGVK--------NGYQALRIKIWKSYDVQVLISTDDITTEAGV 849 (1392)
Q Consensus 780 ~~~~ylItGG~--gGiG~~lA~~La~~GAr~lvl~sRs~~~--------~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v 849 (1392)
.++++|||||+ ||||.++|++|+++|++ |++++|+..+ ........+.++..|.++..+.||+++.+++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 82 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGID-IFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP 82 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCc-EEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 45899999999 49999999999999995 8888887221 1112223445556688899999999999999
Q ss_pred HHHHHHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCC
Q psy1119 850 VNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNA 926 (1392)
Q Consensus 850 ~~l~~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~ 926 (1392)
+++++.+ +.+++||+||||||+....++.+.+.++|+..+++|+.|++++.+++.+.+. ..++||++||.++..+.+
T Consensus 83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~ 162 (256)
T PRK12748 83 NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMP 162 (256)
T ss_pred HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCC
Confidence 9999998 6689999999999998888899999999999999999999999988765432 347999999999988889
Q ss_pred CChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 927 GQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 927 gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++..|+++|++++++++..+.+ |++..++.+|.+.
T Consensus 163 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~ 201 (256)
T PRK12748 163 DELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTD 201 (256)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCccc
Confidence 9999999999999998876654 7888999998774
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-18 Score=200.03 Aligned_cols=173 Identities=22% Similarity=0.191 Sum_probs=146.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+... .+...+.+ + ++.++.||++++++++++++.+ +.
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~-v~~~~r~~~~---~~~~~~~~---~-~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGAR-VAIGDLDEAL---AKETAAEL---G-LVVGGPLDVTDPASFAAFLDAVEAD 75 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEECCHHH---HHHHHHHh---c-cceEEEccCCCHHHHHHHHHHHHHH
Confidence 3579999999999999999999999997 8888887422 22222222 2 4677899999999999999998 56
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|++|||||+.....+.+.+.++|++++++|+.|+.++.+.+.+.+. ..++||++||+++..+.++++.|+++|+
T Consensus 76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 155 (273)
T PRK07825 76 LGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKH 155 (273)
T ss_pred cCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHH
Confidence 89999999999999889999999999999999999999999988866542 3479999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++++|++..+.+ |++...+..|.+
T Consensus 156 a~~~~~~~l~~el~~~gi~v~~v~Pg~v 183 (273)
T PRK07825 156 AVVGFTDAARLELRGTGVHVSVVLPSFV 183 (273)
T ss_pred HHHHHHHHHHHHhhccCcEEEEEeCCcC
Confidence 998888776554 777788877765
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.9e-18 Score=196.56 Aligned_cols=175 Identities=17% Similarity=0.168 Sum_probs=149.7
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g 860 (1392)
++|+||||+||||.++|++|+++|++ |++++|+. .......++++..|.++..+.||++|+++++++++.+ +.++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~-v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~ 76 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFA-VAVADLNE---ETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFG 76 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCH---HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 58999999999999999999999996 88888873 2334455666677888999999999999999999998 6689
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
++|+||||||+....++.+.+.++|++.+++|+.++.++.+++.+.+. ..++||++||.++..|.++++.|+++|++
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 156 (254)
T TIGR02415 77 GFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFA 156 (254)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHH
Confidence 999999999998888899999999999999999999998877654332 23799999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++|++..+.+ |....++..|.+
T Consensus 157 ~~~~~~~l~~~~~~~~i~v~~v~Pg~i 183 (254)
T TIGR02415 157 VRGLTQTAAQELAPKGITVNAYCPGIV 183 (254)
T ss_pred HHHHHHHHHHHhcccCeEEEEEecCcc
Confidence 99999987666 556667776655
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.1e-18 Score=195.56 Aligned_cols=175 Identities=22% Similarity=0.269 Sum_probs=149.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++++||||+||||.++|++|+++|++ |++++|+.. ...... ++.|.++..+.||+++.+++.++++.+ +.
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~-v~~~~r~~~---~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGAR-VAITGRDPA---SLEAAR---AELGESALVIRADAGDVAAQKALAQALAEA 77 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCCHH---HHHHHH---HHhCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999996 888888731 122222 233678888999999999999999988 56
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
++++|+||||||.....++.+.+.++|++.++.|+.|+++|.+++.+++...+.+|++||.++..|.++++.|+++|+++
T Consensus 78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~ 157 (249)
T PRK06500 78 FGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAAL 157 (249)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHHHHHHHH
Confidence 89999999999988878888999999999999999999999999877655567899999999999999999999999999
Q ss_pred HHHHHHHHHc----CCCeEEEEccccC
Q psy1119 939 ERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 939 d~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+.|++..+.+ |++..++..|.+.
T Consensus 158 ~~~~~~la~e~~~~gi~v~~i~pg~~~ 184 (249)
T PRK06500 158 LSLAKTLSGELLPRGIRVNAVSPGPVQ 184 (249)
T ss_pred HHHHHHHHHHhhhcCeEEEEEeeCcCC
Confidence 9999877654 6777888887663
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=6e-18 Score=196.50 Aligned_cols=181 Identities=18% Similarity=0.179 Sum_probs=154.9
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
...++++|||||+||||.++|++|+++|++ |++++|+... ......+.++..|.++.++.||+++.++++++++++
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~-V~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~ 119 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGAD-IAIVYLDEHE--DANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETV 119 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcch--HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 446799999999999999999999999997 7788887422 222334455666888999999999999999999997
Q ss_pred hhcCCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 857 NKLGPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+.++++|+||||||... ...+.+.+.++|.+.++.|+.|++++.+++.+.+...++||++||+++..+.+++..|+++|
T Consensus 120 ~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK 199 (290)
T PRK06701 120 RELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATK 199 (290)
T ss_pred HHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHH
Confidence 66899999999999753 46788999999999999999999999999877655568999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++.|++..+.+ |+++.+|..|.+.
T Consensus 200 ~a~~~l~~~la~~~~~~gIrv~~i~pG~v~ 229 (290)
T PRK06701 200 GAIHAFTRSLAQSLVQKGIRVNAVAPGPIW 229 (290)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCCCC
Confidence 9999999988876 7788888877653
|
|
| >KOG0725|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.6e-18 Score=197.17 Aligned_cols=182 Identities=24% Similarity=0.267 Sum_probs=148.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||++|||+++|+.|++.||+ |++++|+..........+......|.++..+.||+++.++++++++.+ +
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~-v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAK-VVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999998 999999854332222222222223456999999999999999999997 6
Q ss_pred h-cCCccEEEECcccCCCc-cccCCCHHHHHHHHhhHhHH-HHHHHHHHhhhCC--CCCeEEEecccccccCCCCC-hhH
Q psy1119 858 K-LGPVDGIFNLAVVLKDA-LFENQTPEDFNASLGPKANA-TKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQ-TNY 931 (1392)
Q Consensus 858 ~-~g~I~gvi~~Agv~~d~-~~~~~t~e~~~~~~~~kv~g-~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq-~~Y 931 (1392)
+ +|+||.+|||||..... ++.+++.|+|+.+++.|+.| ++++.++..+++. ..+.++++||+++..+.+++ ..|
T Consensus 85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y 164 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAY 164 (270)
T ss_pred HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccc
Confidence 6 79999999999998766 79999999999999999996 6666777776664 35789999999999887777 899
Q ss_pred HHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 932 GMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 932 aaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++|++++.|++..+.+ |..+-+|..|.+.
T Consensus 165 ~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~ 198 (270)
T KOG0725|consen 165 GVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVK 198 (270)
T ss_pred hhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEe
Confidence 99999999999988776 5555666666543
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.5e-18 Score=196.05 Aligned_cols=180 Identities=20% Similarity=0.188 Sum_probs=153.4
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
+.++++++||||+||||+++|++|+++|++ |++++|+.. ..+...++++..|.++..+.+|+++.++++++++++
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAGAD-VVLAARTAE---RLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALAL 77 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCE-EEEEeCCHH---HHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHH
Confidence 346789999999999999999999999996 888888742 233444555666778899999999999999999998
Q ss_pred hhcCCccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-CCCCeEEEecccccccCCCCChhHHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMC-PTLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
++++++|+||||||.... .++.+.+.++|++.+++|+.|++++.+++.+.+ ...++||++||+.+..+.+++..|+++
T Consensus 78 ~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~s 157 (258)
T PRK07890 78 ERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMA 157 (258)
T ss_pred HHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHH
Confidence 678999999999998644 678899999999999999999999999886544 234799999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|++++.+++..+.+ |.+..++..|.+.
T Consensus 158 K~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~ 188 (258)
T PRK07890 158 KGALLAASQSLATELGPQGIRVNSVAPGYIW 188 (258)
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEeCCccC
Confidence 99999999988764 6777788777653
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.5e-18 Score=196.66 Aligned_cols=179 Identities=21% Similarity=0.204 Sum_probs=151.4
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||+++|++|+++|++ ++++.|+.. +......++++..|.++..+.||+++.++++++++.+ +.
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~-vvi~~~~~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~ 82 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAK-VVINYRSDE--EEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE 82 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCCH--HHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 666777532 2333445566667888999999999999999999988 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+++||++|||||.....++.+.+.++|++.++.|+.+++++.+.+.+.+. ..+.||++||+.+..+.++++.|+++|
T Consensus 83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 162 (261)
T PRK08936 83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASK 162 (261)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHH
Confidence 89999999999998888899999999999999999999998776654442 247999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++.|++..+.+ |+.+.+|..|.+.
T Consensus 163 aa~~~~~~~la~e~~~~gi~v~~v~pg~v~ 192 (261)
T PRK08936 163 GGVKLMTETLAMEYAPKGIRVNNIGPGAIN 192 (261)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEEECcCC
Confidence 9999998887654 6777788877663
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.9e-18 Score=195.88 Aligned_cols=174 Identities=16% Similarity=0.110 Sum_probs=142.8
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCc-eEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDV-QVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~-~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
++++||||++|||+++|++|+ +|++ |++++|+..+ .++..+++++.|. .+.+++||++|.++++++++++ +.+
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~-Vil~~r~~~~---~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 75 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGED-VVLAARRPEA---AQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA 75 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCE-EEEEeCCHHH---HHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc
Confidence 479999999999999999999 5986 8888997532 3344555655554 4788999999999999999998 568
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-C--CCeEEEecccccccCCCCChhHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-T--LGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~--l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
|+||++|||||+.....+.+.+.++|.+++..++.+..++.+++.+.+. . .+.||++||.++..+.++.+.|+++|+
T Consensus 76 g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 155 (246)
T PRK05599 76 GEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKA 155 (246)
T ss_pred CCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHH
Confidence 9999999999998776677788888999999999999988777655442 2 479999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++.+|++..+.+ |....++..|.+
T Consensus 156 a~~~~~~~la~el~~~~I~v~~v~PG~v 183 (246)
T PRK05599 156 GLDAFCQGLADSLHGSHVRLIIARPGFV 183 (246)
T ss_pred HHHHHHHHHHHHhcCCCceEEEecCCcc
Confidence 999999988776 344455555554
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.3e-18 Score=195.20 Aligned_cols=176 Identities=18% Similarity=0.132 Sum_probs=146.8
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
.++++||||+||||+++|++|+++|++ |++++|+.. ...+..+++...+ ++..+.||+++++++.++++++ +++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~-v~~~~r~~~---~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~ 76 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGAT-LGLVARRTD---ALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAH 76 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 468999999999999999999999996 888888742 2223334444444 7889999999999999999997 678
Q ss_pred CCccEEEECcccCCCcccc-CCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFE-NQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~-~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
|++|++|||||+....... +.+.++|+..+++|+.|+.++.+++.+.+ ...++||++||+++..|.++.+.|+++|+
T Consensus 77 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~ 156 (257)
T PRK07024 77 GLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKA 156 (257)
T ss_pred CCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHH
Confidence 9999999999987654443 37889999999999999999988775544 23489999999999999999999999999
Q ss_pred HHHHHHHHHHH----cCCCeEEEEccccC
Q psy1119 937 IMERICEARRA----EGLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~----~Glp~~ai~~g~~~ 961 (1392)
+++.|++..+. .|++..++..|.+.
T Consensus 157 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~ 185 (257)
T PRK07024 157 AAIKYLESLRVELRPAGVRVVTIAPGYIR 185 (257)
T ss_pred HHHHHHHHHHHHhhccCcEEEEEecCCCc
Confidence 99999988653 48888999988774
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.4e-18 Score=199.72 Aligned_cols=165 Identities=21% Similarity=0.190 Sum_probs=142.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+.. ......+++...|.++.++.+|++|.++++++++.+ +.
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMK-LVLADVQQD---ALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER 80 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCE-EEEEeCChH---HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999997 888888742 233344555556788999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---C-----CCeEEEecccccccCCCCChh
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---T-----LGQFVVFSSVSCGRGNAGQTN 930 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~-----l~~fV~~SS~s~~~G~~gq~~ 930 (1392)
++++|+||||||.....++.+.+.++|+..+++|+.|+.++.+++.+.+. . .++||++||+++..+.++++.
T Consensus 81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~ 160 (287)
T PRK06194 81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGI 160 (287)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcc
Confidence 89999999999998888899999999999999999999999888755431 1 168999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHc
Q psy1119 931 YGMANSIMERICEARRAE 948 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~ 948 (1392)
|+++|+++++|++..+.+
T Consensus 161 Y~~sK~a~~~~~~~l~~e 178 (287)
T PRK06194 161 YNVSKHAVVSLTETLYQD 178 (287)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 999999999999987654
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.7e-18 Score=198.56 Aligned_cols=176 Identities=19% Similarity=0.174 Sum_probs=145.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.. ......+++. .+.++.++++|++|.++++++++.+ +.
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~-v~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 91 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAK-VCIVDLQDD---LGQNVCDSLG-GEPNVCFFHCDVTVEDDVSRAVDFTVDK 91 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHH---HHHHHHHHhc-CCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 777787632 2222333343 3567889999999999999999998 66
Q ss_pred cCCccEEEECcccCCC--ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHH
Q psy1119 859 LGPVDGIFNLAVVLKD--ALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d--~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+++||+||||||.... ..+.+.+.++|+++++.|+.|++++.+++.+.+ ...+++|++||.++..|.+++..|+++
T Consensus 92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~s 171 (280)
T PLN02253 92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGS 171 (280)
T ss_pred hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHH
Confidence 8999999999998643 468899999999999999999999988775543 234799999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
|+++++|++..+.+ |....++..|.+
T Consensus 172 K~a~~~~~~~la~e~~~~gi~v~~i~pg~v 201 (280)
T PLN02253 172 KHAVLGLTRSVAAELGKHGIRVNCVSPYAV 201 (280)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeeCcc
Confidence 99999999988776 455556666655
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.1e-18 Score=193.59 Aligned_cols=177 Identities=18% Similarity=0.218 Sum_probs=151.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||.++|++|+++|++ |++++|+... .....+.++ .+.++..+.||++|+++++++++.+ +.
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~-v~~~~r~~~~---~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~ 78 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGAR-VVVADRDAEA---AERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAAR 78 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCe-EEEecCCHHH---HHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999997 8888888422 222333443 5778899999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|+||||||......+.+.+.++|..+++.|+.|++++.+.+.+.+. +.++||++||+++..|.+++..|+++|+
T Consensus 79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~ 158 (252)
T PRK06138 79 WGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKG 158 (252)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHH
Confidence 89999999999998888889999999999999999999999888765442 3479999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++.+++..+.+ |+...++..|.+.
T Consensus 159 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~ 187 (252)
T PRK06138 159 AIASLTRAMALDHATDGIRVNAVAPGTID 187 (252)
T ss_pred HHHHHHHHHHHHHHhcCeEEEEEEECCcc
Confidence 999999987654 6778888887663
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.8e-18 Score=194.67 Aligned_cols=177 Identities=16% Similarity=0.137 Sum_probs=151.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC--CceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY--DVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~--G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
.+++++||||+||||.++|++|+++|++ |++++|+.. ..+...+.++.. +.++..+.||++++++++++++.+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~-v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGAD-VLIVARDAD---ALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE 83 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHH---HHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 5899999999999999999999999997 888888742 233334444443 678999999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+.+++||+|||+||.....++.+.+.++|++.+.+|+.|++++.+++.+.+. ..++||++||.++..+.++.+.|+++
T Consensus 84 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~s 163 (257)
T PRK09242 84 DHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMT 163 (257)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHH
Confidence 6789999999999987777888999999999999999999999988866542 35899999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
|+++++|++..+.+ |.+..+|..|.+
T Consensus 164 K~a~~~~~~~la~e~~~~~i~v~~i~Pg~i 193 (257)
T PRK09242 164 KAALLQMTRNLAVEWAEDGIRVNAVAPWYI 193 (257)
T ss_pred HHHHHHHHHHHHHHHHHhCeEEEEEEECCC
Confidence 99999999977654 677778877765
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.8e-18 Score=194.42 Aligned_cols=177 Identities=19% Similarity=0.261 Sum_probs=153.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+... .....+.++..|.++..+.+|++|.++++++++.+ +.
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~-V~~~~r~~~~---~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAE-VILNGRDPAK---LAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE 84 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCE-EEEEeCCHHH---HHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 5799999999999999999999999996 8888887432 23344556666888999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|+||||||.....++.+.+.++|++++++|+.|++++.+++.+.+. ..++||++||.++..+.++++.|+++|+
T Consensus 85 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~ 164 (255)
T PRK07523 85 IGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKG 164 (255)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHH
Confidence 89999999999998888999999999999999999999999998876542 3579999999999999999999999999
Q ss_pred HHHHHHHHHHH----cCCCeEEEEcccc
Q psy1119 937 IMERICEARRA----EGLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~----~Glp~~ai~~g~~ 960 (1392)
+++++++..+. .|.++.+|..|.+
T Consensus 165 a~~~~~~~~a~e~~~~gi~v~~i~pg~~ 192 (255)
T PRK07523 165 AVGNLTKGMATDWAKHGLQCNAIAPGYF 192 (255)
T ss_pred HHHHHHHHHHHHhhHhCeEEEEEEECcc
Confidence 99999987765 3667777776654
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.6e-18 Score=199.38 Aligned_cols=180 Identities=14% Similarity=0.043 Sum_probs=145.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcc-------cHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVK-------NGYQALRIKIWKSYDVQVLISTDDITTEAGVVNL 852 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~-------~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l 852 (1392)
.+++++||||++|||+++|+.|+++|++ |++++|+... .+......++++..|.++.+++||++++++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGAT-VYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 5799999999999999999999999996 8888887421 1223334455666677888999999999999999
Q ss_pred HHHH-hhcCCccEEEECc-ccC----CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEeccccccc-
Q psy1119 853 LTEA-NKLGPVDGIFNLA-VVL----KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGR- 923 (1392)
Q Consensus 853 ~~~~-~~~g~I~gvi~~A-gv~----~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~- 923 (1392)
++++ +++|+||++|||| |+. ...++.+++.++|.++++.|+.|.+++.+++.+++. ..+.||++||.++..
T Consensus 86 ~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~ 165 (305)
T PRK08303 86 VERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYN 165 (305)
T ss_pred HHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccccc
Confidence 9998 6789999999999 753 136788899999999999999999999888877653 247999999987654
Q ss_pred --CCCCChhHHHHHHHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 924 --GNAGQTNYGMANSIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 924 --G~~gq~~Yaaana~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
+.++...|+++|+++.+|++..+.+. ..+.+|..|.+
T Consensus 166 ~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v 208 (305)
T PRK08303 166 ATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWL 208 (305)
T ss_pred CcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCcc
Confidence 34567899999999999999887764 44555655544
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.7e-18 Score=194.19 Aligned_cols=177 Identities=20% Similarity=0.248 Sum_probs=149.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||.++|++|+++|++ |++++|+... .....+.++..+.++..+.||+++.+++.++++.+ +.
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~-v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 81 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAK-VVVADRDAAG---GEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA 81 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHH---HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 8888988532 23344555666778999999999999999999998 67
Q ss_pred cCCccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+|+||+||||||+... .++.+.+.++|++.+++|+.+++++.+++.+.+ .+.++||++||.++..+.++.+.|+++|
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK 161 (253)
T PRK06172 82 YGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASK 161 (253)
T ss_pred hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHH
Confidence 8999999999998654 458899999999999999999999887665433 2347999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++++|++..+.+ |+.+.+|..|.+
T Consensus 162 aa~~~~~~~la~e~~~~~i~v~~i~PG~v 190 (253)
T PRK06172 162 HAVIGLTKSAAIEYAKKGIRVNAVCPAVI 190 (253)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeCCc
Confidence 9999999988766 455666776655
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.3e-18 Score=194.91 Aligned_cols=176 Identities=22% Similarity=0.219 Sum_probs=149.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++++||||+||||+++|++|+++|++ |++++|+.. .....+.+...+.++..++||+++.++++++++++ ++
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~-Vv~~~r~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 79 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGAN-LILLDISPE----IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK 79 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEecCCHH----HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999997 888888742 22233444455778889999999999999999998 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEeccccc-ccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSC-GRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~-~~G~~gq~~Yaaan 935 (1392)
+++||+||||||......+.+.+.++|++.+++|+.|++++.+++.+.+. ..+.||++||.++ ..+.+++..|+++|
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK 159 (263)
T PRK08226 80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTK 159 (263)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHH
Confidence 89999999999998888899999999999999999999999988765442 3468999999888 56788999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++++++++..+.+ |+...+|.+|.+
T Consensus 160 ~a~~~~~~~la~~~~~~~i~v~~i~pg~v 188 (263)
T PRK08226 160 AAIVGLTKSLAVEYAQSGIRVNAICPGYV 188 (263)
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEecCcc
Confidence 9999999988765 666778887765
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3e-18 Score=195.58 Aligned_cols=176 Identities=23% Similarity=0.247 Sum_probs=149.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
+++++|||||+||||+++|++|+++|++ +++++|+.... ...+.++..|.++.++.||++++++++++++++ +.
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~-v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAI-PVIFGRSAPDD----EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK 80 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCc-EEEEcCChhhH----HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999999997 77778875322 345566666888999999999999999999998 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
++++|+||||||+.....+...+ ++|+..++.|+.+++++.+.+.+.+. ..++||++||.++..+.++.+.|+++|++
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 159 (258)
T PRK08628 81 FGRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGA 159 (258)
T ss_pred cCCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHHHH
Confidence 89999999999987666666665 99999999999999999888765442 34799999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++.+++..+.+ |....+|..|.+.
T Consensus 160 ~~~~~~~l~~e~~~~~i~v~~v~pg~v~ 187 (258)
T PRK08628 160 QLALTREWAVALAKDGVRVNAVIPAEVM 187 (258)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEecCccC
Confidence 99999988764 5666777776653
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.8e-18 Score=194.69 Aligned_cols=181 Identities=19% Similarity=0.215 Sum_probs=148.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||.++|++|+++|++.+++..|+....+..+...++++..+.++..+++|++++++++++++++ +.
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 46899999999999999999999999985555444332333344455666666888899999999999999999998 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEe-cccccccCCCCChhHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVF-SSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~-SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+++||++|||||.....++.+.+.++|++.+++|+.|++++.+++.+.+.+.+.++++ ||.++ ...++++.|+++|++
T Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~-~~~~~~~~Y~~sK~a 165 (257)
T PRK12744 87 FGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLG-AFTPFYSAYAGSKAP 165 (257)
T ss_pred hCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhc-ccCCCcccchhhHHH
Confidence 8999999999999877888899999999999999999999988887666555667665 55444 356788999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++|++..+.+ |++..++..|.+.
T Consensus 166 ~~~~~~~la~e~~~~~i~v~~v~pg~v~ 193 (257)
T PRK12744 166 VEHFTRAASKEFGARGISVTAVGPGPMD 193 (257)
T ss_pred HHHHHHHHHHHhCcCceEEEEEecCccc
Confidence 99999998876 5667777777764
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.1e-18 Score=199.58 Aligned_cols=180 Identities=12% Similarity=0.058 Sum_probs=139.7
Q ss_pred CCCCeEEEEcC--cchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHH-----Hh--cCCc---eEEEEeccC--C
Q psy1119 779 DSNKSYIICGG--LGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKI-----WK--SYDV---QVLISTDDI--T 844 (1392)
Q Consensus 779 ~~~~~ylItGG--~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~-----l~--~~G~---~v~~~~~Dv--~ 844 (1392)
..+|++||||| ++|||+++|+.|+++||+ ||+ +|+....+.....++. .+ ..|. .+.++.+|+ +
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~-Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 84 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAE-ILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD 84 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCE-EEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence 46899999999 899999999999999998 666 5654333222211111 00 1121 246788898 4
Q ss_pred C------------------HHHHHHHHHHH-hhcCCccEEEECcccCC--CccccCCCHHHHHHHHhhHhHHHHHHHHHH
Q psy1119 845 T------------------EAGVVNLLTEA-NKLGPVDGIFNLAVVLK--DALFENQTPEDFNASLGPKANATKYFDKYS 903 (1392)
Q Consensus 845 ~------------------~~~v~~l~~~~-~~~g~I~gvi~~Agv~~--d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~ 903 (1392)
+ .++++++++++ +++|+||++|||||+.. .+++.+++.++|+++++.|+.|.+++.+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~ 164 (303)
T PLN02730 85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHF 164 (303)
T ss_pred ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 3 44899999998 67999999999998643 378999999999999999999999999998
Q ss_pred hhhCCCCCeEEEecccccccCCCCC-hhHHHHHHHHHHHHHHHHHcCC--CeEEEEcccc
Q psy1119 904 RTMCPTLGQFVVFSSVSCGRGNAGQ-TNYGMANSIMERICEARRAEGL--PGLAVEWGAV 960 (1392)
Q Consensus 904 ~~~~~~l~~fV~~SS~s~~~G~~gq-~~Yaaana~ld~la~~r~~~Gl--p~~ai~~g~~ 960 (1392)
.+++.+.+.+|++||+++..+.++. +.|+++|+++.+|++..+.+.. ..+.++.-.+
T Consensus 165 ~p~m~~~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~P 224 (303)
T PLN02730 165 GPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISA 224 (303)
T ss_pred HHHHhcCCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEee
Confidence 7776556999999999999998876 5899999999999999988743 2444444333
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.7e-18 Score=193.84 Aligned_cols=178 Identities=19% Similarity=0.171 Sum_probs=150.7
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
++++|||||++|||+++|++|+++|++ |+++.|+.. +..+...++++..|.++..+.||+++.++++++++++ +.+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~-V~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFD-IGITWHSDE--EGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCCh--HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999999997 555544421 2233445566677889999999999999999999998 678
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-C--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC-P--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+++|+||||||......+.+.+.++|++.+..|+.|++++.+++.+.+ . ..++||++||.++..+.++...|+++|+
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~ 158 (256)
T PRK12743 79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKH 158 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHH
Confidence 999999999998877788899999999999999999999998876544 2 2368999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++.+++..+.+ |.+..+|..|.+.
T Consensus 159 a~~~l~~~la~~~~~~~i~v~~v~Pg~~~ 187 (256)
T PRK12743 159 ALGGLTKAMALELVEHGILVNAVAPGAIA 187 (256)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEEeCCcc
Confidence 999998877654 6677888887664
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.2e-18 Score=194.13 Aligned_cols=175 Identities=18% Similarity=0.247 Sum_probs=144.7
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+++++||||+||||.++|++|+++|++ |++++|+..+ .....+ ..+.++.+++||+++.++++++++++ +
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~-v~~~~~~~~~---~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQ-VVLADLDRER---GSKVAK---ALGENAWFIAMDVADEAQVAAGVAEVLG 80 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCE-EEEEcCCHHH---HHHHHH---HcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999996 7777776321 111222 23556888999999999999999988 6
Q ss_pred hcCCccEEEECcccCCC--ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-CCCCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKD--ALFENQTPEDFNASLGPKANATKYFDKYSRTMC-PTLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d--~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
++|++|+||||||+... .++.+++.++|+.+++.|+.|++++.+++.+++ ...++||++||.++..+.++++.|+++
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~s 160 (255)
T PRK05717 81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAAS 160 (255)
T ss_pred HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHH
Confidence 78999999999998743 578899999999999999999999999987654 245899999999999999999999999
Q ss_pred HHHHHHHHHHHHHcC---CCeEEEEcccc
Q psy1119 935 NSIMERICEARRAEG---LPGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~G---lp~~ai~~g~~ 960 (1392)
|+++++|++....+. .+..+|..|.+
T Consensus 161 Kaa~~~~~~~la~~~~~~i~v~~i~Pg~i 189 (255)
T PRK05717 161 KGGLLALTHALAISLGPEIRVNAVSPGWI 189 (255)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEecccC
Confidence 999999999887763 44455555544
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.8e-18 Score=191.15 Aligned_cols=180 Identities=16% Similarity=0.115 Sum_probs=153.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
...++++||||+||||+++|+.|+++|++ |++++|+... .....+.++..+.++.++.||+++.+++.++++.+ +
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~-V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWD-LALVARSQDA---LEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLE 79 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999996 8888998532 22334445555677888999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+++++|+||||||.....++.+.+.++|+..++.|+.+++++.+.+.+.+. ..++||++||.++..+.+++..|+++|
T Consensus 80 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 159 (241)
T PRK07454 80 QFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSK 159 (241)
T ss_pred HcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHH
Confidence 789999999999998888899999999999999999999999888755442 347999999999999999999999999
Q ss_pred HHHHHHHHHHH----HcCCCeEEEEccccCc
Q psy1119 936 SIMERICEARR----AEGLPGLAVEWGAVGE 962 (1392)
Q Consensus 936 a~ld~la~~r~----~~Glp~~ai~~g~~~~ 962 (1392)
++++.+++..+ ..|++..+|.+|.+..
T Consensus 160 ~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t 190 (241)
T PRK07454 160 AALAAFTKCLAEEERSHGIRVCTITLGAVNT 190 (241)
T ss_pred HHHHHHHHHHHHHhhhhCCEEEEEecCcccC
Confidence 99999988764 3488999999988743
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.1e-18 Score=193.79 Aligned_cols=177 Identities=19% Similarity=0.219 Sum_probs=149.3
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||.++|++|+++|++ |++++|+ ... +...+.+...+.++.++.||+++.++++++++++ +
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 87 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGAD-IIITTHG-TNW---DETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALE 87 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCC-cHH---HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 35799999999999999999999999997 7777776 222 2223344455778889999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
.+|+||++|||||.....++.+.+.++|++.++.|+.+++++.+++.+.+. ..+.||++||.++..|.++.+.|+++|
T Consensus 88 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 167 (258)
T PRK06935 88 EFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASK 167 (258)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHH
Confidence 789999999999988778889999999999999999999999988866542 347999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++++++++..+.+ |....+|..|.+
T Consensus 168 ~a~~~~~~~la~e~~~~gi~v~~i~PG~v 196 (258)
T PRK06935 168 HGVAGLTKAFANELAAYNIQVNAIAPGYI 196 (258)
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEEeccc
Confidence 9999999988775 455666666654
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.5e-18 Score=192.87 Aligned_cols=176 Identities=18% Similarity=0.214 Sum_probs=150.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||.++|+.|+++|++ |++++|+.. . ...+.++..+.++..+.+|+++.+++.++++++ +.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~-vi~~~r~~~--~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGAD-IVGAGRSEP--S---ETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEE 77 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCchH--H---HHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999996 888888631 1 223334455677889999999999999999987 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-C-C-CCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC-P-T-LGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~-~-l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++++|++|||||+.....+.+.+.++|+++++.|+.+++++.+++.+.+ . . .+.||++||.++..+.++...|+++|
T Consensus 78 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 157 (248)
T TIGR01832 78 FGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASK 157 (248)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHH
Confidence 8899999999999887888899999999999999999999998876543 2 2 47999999999998889999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++.+++..+.+ |+...+|..|.+.
T Consensus 158 aa~~~~~~~la~e~~~~gi~v~~v~pg~v~ 187 (248)
T TIGR01832 158 HGVAGLTKLLANEWAAKGINVNAIAPGYMA 187 (248)
T ss_pred HHHHHHHHHHHHHhCccCcEEEEEEECcCc
Confidence 9999999998876 5667778777664
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=190.42 Aligned_cols=179 Identities=20% Similarity=0.220 Sum_probs=150.4
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
+++++||||+||||.++|++|+++|++ |++++|+.. +......+.++..+.++.++.+|+++++++.++++.+ +.+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~-vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFD-LAINDRPDD--EELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAW 78 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCE-EEEEecCch--hHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 478999999999999999999999996 777777642 2233344555556778899999999999999999998 568
Q ss_pred CCccEEEECcccCC--CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--C------CCeEEEecccccccCCCCCh
Q psy1119 860 GPVDGIFNLAVVLK--DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--T------LGQFVVFSSVSCGRGNAGQT 929 (1392)
Q Consensus 860 g~I~gvi~~Agv~~--d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~------l~~fV~~SS~s~~~G~~gq~ 929 (1392)
+++|+||||||+.. ..++.+.+.++|++.++.|+.|+++|.+++.+.+. . .+.||++||+++..|.++++
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~ 158 (256)
T PRK12745 79 GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRG 158 (256)
T ss_pred CCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCc
Confidence 99999999999853 35688999999999999999999999888755431 1 35799999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHH----cCCCeEEEEccccCc
Q psy1119 930 NYGMANSIMERICEARRA----EGLPGLAVEWGAVGE 962 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~----~Glp~~ai~~g~~~~ 962 (1392)
.|+++|++++.|++..+. .|++..++.+|.+..
T Consensus 159 ~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t 195 (256)
T PRK12745 159 EYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKT 195 (256)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcC
Confidence 999999999999987764 588999999987643
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.7e-18 Score=192.07 Aligned_cols=174 Identities=20% Similarity=0.125 Sum_probs=146.8
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh-c
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK-L 859 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~-~ 859 (1392)
+++|||||+||||+++|++|+++|++ |++++|+... .+...+.+. |.++.+++||+++.++++++++.+ +. +
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~-V~~~~r~~~~---~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 75 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWR-VGAYDINEAG---LAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATG 75 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHH---HHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 68999999999999999999999997 7788887422 222222222 567889999999999999999987 43 7
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
++||+||||||......+.+.+.++|+.++++|+.|++++.+++.+.+. +.++||++||.++..|.++...|+++|++
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa 155 (260)
T PRK08267 76 GRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFA 155 (260)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHH
Confidence 8999999999999888999999999999999999999999888765442 35899999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++.|++..+.+ |.+..++..|.+.
T Consensus 156 ~~~~~~~l~~~~~~~~i~v~~i~pg~~~ 183 (260)
T PRK08267 156 VRGLTEALDLEWRRHGIRVADVMPLFVD 183 (260)
T ss_pred HHHHHHHHHHHhcccCcEEEEEecCCcC
Confidence 99999987654 6777777666553
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=7e-18 Score=192.05 Aligned_cols=178 Identities=20% Similarity=0.245 Sum_probs=149.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||.++|++|+++|++.+++..|+.. ......+.+...+.++.++.+|++|.+++.++++++ +.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~ 81 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQ---AADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNE 81 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence 35899999999999999999999999985555577632 222333445555677889999999999999999987 44
Q ss_pred c------CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHH
Q psy1119 859 L------GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 859 ~------g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
+ +++|+|||+||......+.+.+.+.|+..+++|+.|++++.+++.+.+...++||++||.++..+.++++.|+
T Consensus 82 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~Y~ 161 (254)
T PRK12746 82 LQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYG 161 (254)
T ss_pred hccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcchH
Confidence 4 5799999999998888899999999999999999999999998877655568999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++|++++.+++..+.+ |.+..++..|.+
T Consensus 162 ~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~ 193 (254)
T PRK12746 162 LSKGALNTMTLPLAKHLGERGITVNTIMPGYT 193 (254)
T ss_pred hhHHHHHHHHHHHHHHHhhcCcEEEEEEECCc
Confidence 9999999999887664 666777776654
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.2e-18 Score=191.40 Aligned_cols=180 Identities=17% Similarity=0.164 Sum_probs=153.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++++||||+||||+++|++|+++|++.+++..|+... .++..++++..|.++.++.||++|+++++++++++ +.
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKA---AEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEE 79 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999866656777422 33444555666788899999999999999999998 56
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|+||||||.....++.+.+.++|...+.+|+.|++++.+++.+.+. ..+.||++||+.+..+.++...|+++|+
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~ 159 (250)
T PRK08063 80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKA 159 (250)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHH
Confidence 89999999999988888899999999999999999999999988876543 3469999999999888899999999999
Q ss_pred HHHHHHHHHHH----cCCCeEEEEccccCc
Q psy1119 937 IMERICEARRA----EGLPGLAVEWGAVGE 962 (1392)
Q Consensus 937 ~ld~la~~r~~----~Glp~~ai~~g~~~~ 962 (1392)
+++.|++..+. .|++..+|.+|.+..
T Consensus 160 a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t 189 (250)
T PRK08063 160 ALEALTRYLAVELAPKGIAVNAVSGGAVDT 189 (250)
T ss_pred HHHHHHHHHHHHHhHhCeEEEeEecCcccC
Confidence 99999987654 467788888887643
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=7e-18 Score=188.67 Aligned_cols=176 Identities=14% Similarity=0.085 Sum_probs=145.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++++||||++|||+++|+.|+++|++ |++++|+.. ..+...++++..|.++..+.||++++++++++++.+ ++
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~-V~~~~r~~~---~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGAT-LILCDQDQS---ALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQ 79 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCE-EEEEcCCHH---HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999997 888898742 233334455556778888999999999999999998 67
Q ss_pred cC-CccEEEECcccC-CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccCCCCChhHHH
Q psy1119 859 LG-PVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRGNAGQTNYGM 933 (1392)
Q Consensus 859 ~g-~I~gvi~~Agv~-~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G~~gq~~Yaa 933 (1392)
+| +||++|||||.. ...++.+.+.++|.+.+..++.+++.+.+.+.+++. ..+.||++||..+ .++.+.|++
T Consensus 80 ~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~---~~~~~~Y~a 156 (227)
T PRK08862 80 FNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD---HQDLTGVES 156 (227)
T ss_pred hCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC---CCCcchhHH
Confidence 88 999999999854 456889999999999999999999998877755442 2479999999764 366889999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
+|+++++|++..+.+ |..+.+|..|.+..
T Consensus 157 sKaal~~~~~~la~el~~~~Irvn~v~PG~i~t 189 (227)
T PRK08862 157 SNALVSGFTHSWAKELTPFNIRVGGVVPSIFSA 189 (227)
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcC
Confidence 999999999998876 56677777777644
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.7e-18 Score=193.62 Aligned_cols=179 Identities=17% Similarity=0.160 Sum_probs=147.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-CCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-YDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
+++++|||||++|||+++|+.|+++|++ |++++|+.. +..+...+.++. .|.++.++.||++|+++++++++++ +
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVN-IAFTYNSNV--EEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCH--HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 777766532 222233334432 4778999999999999999999998 6
Q ss_pred hcCCccEEEECcccCC------CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCCh
Q psy1119 858 KLGPVDGIFNLAVVLK------DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQT 929 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~------d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~ 929 (1392)
.+++||.+|||||+.. ..++.+.+.++|.++++.++.+.+.+.+.+.+.+. +.+.||++||.++..+.++..
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 163 (260)
T PRK08416 84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYA 163 (260)
T ss_pred hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcc
Confidence 6899999999998753 35678889999999999999999998887766543 236999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 930 NYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
.|+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 164 ~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~ 199 (260)
T PRK08416 164 GHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPID 199 (260)
T ss_pred cchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCccc
Confidence 9999999999999998886 5667777777653
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.5e-18 Score=195.09 Aligned_cols=174 Identities=21% Similarity=0.268 Sum_probs=146.1
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+.... .+.++..+.+|++++++++++++.+ +
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~-v~~~~~~~~~~------------~~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGAN-VVNADIHGGDG------------QHENYQFVPTDVSSAEEVNHTVAEIIE 73 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCcccc------------ccCceEEEEccCCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999997 77777764321 1235778899999999999999998 6
Q ss_pred hcCCccEEEECcccCCCcc---------ccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCC
Q psy1119 858 KLGPVDGIFNLAVVLKDAL---------FENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNA 926 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~---------~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~ 926 (1392)
.++++|+||||||+..... +.+.+.++|++++++|+.|++++.+++.+++. ..++||++||.++..|.+
T Consensus 74 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 153 (266)
T PRK06171 74 KFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSE 153 (266)
T ss_pred HcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC
Confidence 7899999999999764432 35689999999999999999999988876543 347999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccCcccc
Q psy1119 927 GQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVGEVGL 965 (1392)
Q Consensus 927 gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~~~G~ 965 (1392)
+++.|+++|+++++|++..+.+ |..+.+|.+|.+...++
T Consensus 154 ~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~ 196 (266)
T PRK06171 154 GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGL 196 (266)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCC
Confidence 9999999999999999988765 66778888887754444
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.7e-18 Score=190.94 Aligned_cols=175 Identities=19% Similarity=0.220 Sum_probs=148.3
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcCCc
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLGPV 862 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g~I 862 (1392)
++||||+||||.++|++|+++|++ +++++|+.. +......++++..+.++.++.+|+++.++++++++++ +.++++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~-v~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 77 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFE-ICVHYHSGR--SDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAY 77 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCCH--HHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 589999999999999999999998 667776532 2233445666667888999999999999999999987 678999
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHH-hhhC--CCCCeEEEecccccccCCCCChhHHHHHHHHH
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYS-RTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANSIME 939 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~-~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld 939 (1392)
|++|||||+..+..+.+.+.++|+.++++|+.|++++.+++ .+++ .+.++||++||.++..|.+++++|+++|++++
T Consensus 78 ~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 157 (239)
T TIGR01831 78 YGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLI 157 (239)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHH
Confidence 99999999988888899999999999999999999997765 3332 24579999999999999999999999999998
Q ss_pred HHHHHHHH----cCCCeEEEEccccC
Q psy1119 940 RICEARRA----EGLPGLAVEWGAVG 961 (1392)
Q Consensus 940 ~la~~r~~----~Glp~~ai~~g~~~ 961 (1392)
.+++..+. .|++..++..|.+.
T Consensus 158 ~~~~~la~e~~~~gi~v~~v~Pg~v~ 183 (239)
T TIGR01831 158 GATKALAVELAKRKITVNCIAPGLID 183 (239)
T ss_pred HHHHHHHHHHhHhCeEEEEEEEccCc
Confidence 88887655 47888888888764
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.4e-18 Score=191.58 Aligned_cols=172 Identities=15% Similarity=0.164 Sum_probs=142.1
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
.+++|||||+||||+++|++|+++|++ |++++|+... ..+.++..| +.++.||+++.++++++++++ +.+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~------~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~ 72 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQP-VIVSYRTHYP------AIDGLRQAG--AQCIQADFSTNAGIMAFIDELKQHT 72 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCchh------HHHHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhC
Confidence 478999999999999999999999996 8888887532 123333445 456899999999999999998 568
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC----CCeEEEecccccccCCCCChhHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT----LGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~----l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+++|++|||||......+.+.+.++|+++++.|+.+++++.+.+.+++.. .+.+|++||.++..+.+++..|+++|
T Consensus 73 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asK 152 (236)
T PRK06483 73 DGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASK 152 (236)
T ss_pred CCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHH
Confidence 99999999999866666678899999999999999999999888765532 36899999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 936 SIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+..|.+.+|.-.+|
T Consensus 153 aal~~l~~~~a~e~~~~irvn~v~Pg 178 (236)
T PRK06483 153 AALDNMTLSFAAKLAPEVKVNSIAPA 178 (236)
T ss_pred HHHHHHHHHHHHHHCCCcEEEEEccC
Confidence 99999999988875444444444443
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.1e-18 Score=190.77 Aligned_cols=177 Identities=21% Similarity=0.218 Sum_probs=148.8
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS--YDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~--~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
+++|+||||+||||+++|++|+++|++ |++++|+..+.. .....+.. .+.++.+++||+++.+++.++++++ .
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~-v~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRD-LALCARRTDRLE---ELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRD 77 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCE-EEEEeCCHHHHH---HHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHH
Confidence 578999999999999999999999985 888899853322 22233332 3778999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCC-ChhHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAG-QTNYGMA 934 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~g-q~~Yaaa 934 (1392)
++++||++|||||+..+..+...+.+.|.+.++.|+.|+.++.+++.+.+. ..++||++||.++..|.++ +..|+++
T Consensus 78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~s 157 (248)
T PRK08251 78 ELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAAS 157 (248)
T ss_pred HcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHH
Confidence 689999999999998888888899999999999999999999988765432 4579999999999999886 6899999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|++++.+++..+.+ |++..++..|.+.
T Consensus 158 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~ 188 (248)
T PRK08251 158 KAGVASLGEGLRAELAKTPIKVSTIEPGYIR 188 (248)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEecCcCc
Confidence 99999999987765 5566777777653
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.2e-18 Score=193.57 Aligned_cols=175 Identities=17% Similarity=0.253 Sum_probs=147.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |+++.|+... .....+.+ +.++..++||++++++++++++.+ +.
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~-v~~~~r~~~~---~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGAR-VVIADIKPAR---ARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVER 77 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEcCCHHH---HHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999997 8888887422 22222222 446888999999999999999998 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-C--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC-P--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++++|++|||||.....++.+.+.++|+..+++|+.+++++.+++.+.+ . ..++||++||.++..|.++++.|+++|
T Consensus 78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 157 (257)
T PRK07067 78 FGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATK 157 (257)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhH
Confidence 8999999999999877889999999999999999999999999886543 2 236899999999999999999999999
Q ss_pred HHHHHHHHHHHH----cCCCeEEEEccccC
Q psy1119 936 SIMERICEARRA----EGLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~----~Glp~~ai~~g~~~ 961 (1392)
+++++|++..+. .|.+..++..|.+.
T Consensus 158 ~a~~~~~~~la~e~~~~gi~v~~i~pg~v~ 187 (257)
T PRK07067 158 AAVISYTQSAALALIRHGINVNAIAPGVVD 187 (257)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeCccc
Confidence 999999998766 46777888887763
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.6e-18 Score=191.45 Aligned_cols=178 Identities=20% Similarity=0.245 Sum_probs=146.3
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
+++||||||+||||.++|++|+++|++ +++..++.. .........++..+.++..+.||+++.++++++++++ +.+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~-vv~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYA-VCLNYLRNR--DAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL 78 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCe-EEEecCCCH--HHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh
Confidence 578999999999999999999999997 666554421 2233344455666778889999999999999999998 668
Q ss_pred CCccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-C----CCeEEEecccccccCCCCC-hhHH
Q psy1119 860 GPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-T----LGQFVVFSSVSCGRGNAGQ-TNYG 932 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~----l~~fV~~SS~s~~~G~~gq-~~Ya 932 (1392)
++||+||||||.... ..+.+.+.++|++.++.|+.|++++.+++.+.+. . .++||++||.++..+.++. +.|+
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~ 158 (248)
T PRK06123 79 GRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYA 158 (248)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchH
Confidence 999999999998754 4688999999999999999999998887755432 1 3589999999999998874 7899
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++|++++.|++..+.+ |+++.+|.+|.+.
T Consensus 159 ~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~ 191 (248)
T PRK06123 159 ASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIY 191 (248)
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEecCccc
Confidence 9999999999877665 6778888887764
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-17 Score=188.83 Aligned_cols=177 Identities=20% Similarity=0.172 Sum_probs=148.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||++|||+++|++|+++|++ +++++|+.. ..+...++++..|.++.++.||+++.++++++++.+ +.
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~-vv~~~r~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 85 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGAS-VVVSDINAD---AANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCHH---HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999999997 777787642 223344455556778889999999999999999987 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|++|||||.....++ +.+.++|+..++.|+.|++++.+++.+.+. +.+.||++||+++..+.+++..|+++|+
T Consensus 86 ~~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 164 (255)
T PRK06113 86 LGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKA 164 (255)
T ss_pred cCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHH
Confidence 8999999999998766665 689999999999999999999998866542 3369999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |+...++..|.+.
T Consensus 165 a~~~~~~~la~~~~~~~i~v~~v~pg~~~ 193 (255)
T PRK06113 165 AASHLVRNMAFDLGEKNIRVNGIAPGAIL 193 (255)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEeccccc
Confidence 999999988765 4455666666654
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=8e-18 Score=192.20 Aligned_cols=180 Identities=19% Similarity=0.150 Sum_probs=150.1
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-CC-ceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-YD-VQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-~G-~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
++++|||||+||||+++|++|+++|++ |++++|+.... +...+.++. .| .++.++.||+++.++++++++++ +
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~-vi~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 77 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYR-VAVADINSEKA---ANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDE 77 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEECCHHHH---HHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHH
Confidence 578999999999999999999999996 88888874322 222223322 23 57889999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--C-CCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--T-LGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~-l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
.++++|++|||||......+.+.+.++|+..++.|+.|++++.+++.+.+. . .++||++||.++..|.++.+.|+++
T Consensus 78 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 157 (259)
T PRK12384 78 IFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAA 157 (259)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHH
Confidence 689999999999998888899999999999999999999999888766542 2 3699999999999999999999999
Q ss_pred HHHHHHHHHHHH----HcCCCeEEEEccccCccc
Q psy1119 935 NSIMERICEARR----AEGLPGLAVEWGAVGEVG 964 (1392)
Q Consensus 935 na~ld~la~~r~----~~Glp~~ai~~g~~~~~G 964 (1392)
|++++.+++..+ ..|+++.++..|.+-+.+
T Consensus 158 Kaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~ 191 (259)
T PRK12384 158 KFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSP 191 (259)
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEecCCcccch
Confidence 999988887765 468888999988753333
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-17 Score=193.11 Aligned_cols=177 Identities=16% Similarity=0.149 Sum_probs=151.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
+.++++||||+||||+++|++|+++|++ |++++|+.. ........++..|.++..+.+|++++++++++++++ +.
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFP-VALGARRVE---KCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA 84 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999999996 777787642 222334445556778889999999999999999998 56
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|+||||||......+.+.+.++|...+++|+.|++++.+++.+.+ ...++||++||.++..+.++.+.|+++|+
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 164 (274)
T PRK07775 85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKA 164 (274)
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHH
Confidence 8999999999998877888889999999999999999999988875433 23478999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++.+++..+.+ |+++.++.+|.+
T Consensus 165 a~~~l~~~~~~~~~~~gi~v~~v~pG~~ 192 (274)
T PRK07775 165 GLEAMVTNLQMELEGTGVRASIVHPGPT 192 (274)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeCCcc
Confidence 999999987764 788889988875
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.3e-17 Score=190.02 Aligned_cols=177 Identities=19% Similarity=0.128 Sum_probs=149.1
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCce-EEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQ-VLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~-v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
++++||||+||||+++|++|+++|++ |++++|+.. ..+...++++..|.. +..++||++++++++++++++ +.+
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~-vv~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAE-LFLTDRDAD---GLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH 76 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc
Confidence 47999999999999999999999997 888888742 223344555555554 455789999999999999998 668
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+++|+||||||......+.+.+.++|+..+++|+.|++++.+++.+.+. ..++||++||.++..|.+++..|+++|+
T Consensus 77 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~ 156 (272)
T PRK07832 77 GSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKF 156 (272)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHH
Confidence 9999999999988777889999999999999999999999998866442 2479999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
++++|++..+.+ |++..++..|.+..
T Consensus 157 a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t 186 (272)
T PRK07832 157 GLRGLSEVLRFDLARHGIGVSVVVPGAVKT 186 (272)
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEecCcccC
Confidence 999999887754 77788888877653
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-17 Score=190.42 Aligned_cols=178 Identities=16% Similarity=0.106 Sum_probs=151.3
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+++++||||+||||.++|++|+++|++ |++++|+.. ..+...+++...|.++..+.||+++.++++++++++ +
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~~-Vi~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGAH-VIVSSRKLD---GCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRE 81 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999995 888888742 233445555666778888999999999999999998 6
Q ss_pred hcCCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KLGPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
.+++||+|||+||... ..++.+.+.++|+..++.|+.|+.++.+++.+++. ..++||++||+++..+.++++.|+++
T Consensus 82 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s 161 (252)
T PRK07035 82 RHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSIT 161 (252)
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHH
Confidence 6899999999999753 35678899999999999999999999888766542 34899999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
|++++.|++..+.+ |.+..+|..|.+
T Consensus 162 K~al~~~~~~l~~e~~~~gi~v~~i~PG~v 191 (252)
T PRK07035 162 KAAVISMTKAFAKECAPFGIRVNALLPGLT 191 (252)
T ss_pred HHHHHHHHHHHHHHHhhcCEEEEEEeeccc
Confidence 99999999988765 677788877766
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.3e-17 Score=187.15 Aligned_cols=176 Identities=20% Similarity=0.208 Sum_probs=150.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++|+||||+||||.++|++|+++|++ |++++|+... .......++. +.++.++.||++++++++++++++ ++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~-V~~~~r~~~~---~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGAR-VVVTDRNEEA---AERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALER 78 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999998 8999998532 2233344444 678899999999999999999998 67
Q ss_pred cCCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++++|+|||+||... ..++.+.+.++|.+.+++|+.|++++.+.+.+.+. ..+.||++||.++..+.++.+.|+++|
T Consensus 79 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk 158 (251)
T PRK07231 79 FGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASK 158 (251)
T ss_pred hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHH
Confidence 899999999999854 45688999999999999999999999988876542 457899999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++++.+++..+.+ |++..++.+|.+
T Consensus 159 ~~~~~~~~~~a~~~~~~~i~v~~i~pg~~ 187 (251)
T PRK07231 159 GAVITLTKALAAELGPDKIRVNAVAPVVV 187 (251)
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEEECcc
Confidence 9999999987665 677788888866
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-17 Score=187.24 Aligned_cols=175 Identities=25% Similarity=0.266 Sum_probs=146.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++++||||+||||+++|++|+++|++ |++..|+... .+.... ..+.++.++.+|+++.++++++++++ +.
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~-v~~~~~~~~~---~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAI-VGLHGTRVEK---LEALAA---ELGERVKIFPANLSDRDEVKALGQKAEAD 77 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEcCCHHH---HHHHHH---HhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999995 7777776321 222222 22556788899999999999999998 56
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|+||||||...+..+.+.+.++|+..++.|+.|++++.+++.+.+ ...+.||++||.++..|.++.+.|+++|+
T Consensus 78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~ 157 (245)
T PRK12936 78 LEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKA 157 (245)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHH
Confidence 8999999999999888889999999999999999999999988764332 24589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++++..+.+ |++..++.+|.+.
T Consensus 158 a~~~~~~~la~~~~~~~i~v~~i~pg~~~ 186 (245)
T PRK12936 158 GMIGFSKSLAQEIATRNVTVNCVAPGFIE 186 (245)
T ss_pred HHHHHHHHHHHHhhHhCeEEEEEEECcCc
Confidence 999888776544 7788888888664
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.6e-18 Score=192.16 Aligned_cols=165 Identities=20% Similarity=0.239 Sum_probs=142.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+... ...+..+.++.+|+++.++++++++.+ +.
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~-v~~~~r~~~~-----------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 72 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGAT-VVVCGRRAPE-----------TVDGRPAEFHAADVRDPDQVAALVDAIVER 72 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCChhh-----------hhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999999996 8888887421 123567888999999999999999998 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+++||+||||||+.....+.+.+.++|++.++.|+.|++++.+++.+.+. ..+.||++||+++..+.++.+.|+++|
T Consensus 73 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK 152 (252)
T PRK07856 73 HGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAK 152 (252)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHH
Confidence 89999999999998878889999999999999999999999988766442 237899999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCeEEEE
Q psy1119 936 SIMERICEARRAEGLPGLAVE 956 (1392)
Q Consensus 936 a~ld~la~~r~~~Glp~~ai~ 956 (1392)
++++.|++..+.+..+.+.++
T Consensus 153 ~a~~~l~~~la~e~~~~i~v~ 173 (252)
T PRK07856 153 AGLLNLTRSLAVEWAPKVRVN 173 (252)
T ss_pred HHHHHHHHHHHHHhcCCeEEE
Confidence 999999999888754433333
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-17 Score=192.56 Aligned_cols=176 Identities=18% Similarity=0.145 Sum_probs=151.6
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g 860 (1392)
++++||||+||||+++|++|+++|++ |++++|+.. ..+...++++..|.++.+++||+++++++.++++.+ +.++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~-V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 76 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWR-LALADVNEE---GGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWG 76 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 36899999999999999999999997 788888742 334445566666788899999999999999999988 5689
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
++|+||||||....+.+.+.+.++|++.+++|+.++.++.+.+.+.+. ..++||++||.++..+.++.+.|+++|+++
T Consensus 77 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~ 156 (270)
T PRK05650 77 GIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGV 156 (270)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHH
Confidence 999999999999888999999999999999999999999988766543 347999999999999999999999999999
Q ss_pred HHHHHHHHHc----CCCeEEEEccccC
Q psy1119 939 ERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 939 d~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++|++..+.+ |+...++..|.+.
T Consensus 157 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~ 183 (270)
T PRK05650 157 VALSETLLVELADDEIGVHVVCPSFFQ 183 (270)
T ss_pred HHHHHHHHHHhcccCcEEEEEecCccc
Confidence 9999988776 5566777766653
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.9e-17 Score=187.52 Aligned_cols=179 Identities=16% Similarity=0.118 Sum_probs=145.6
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++.+++..|+. +......+.++..|.++..+.||++|.+++.++++.+ .
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 83 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSR---DEAEALAAEIRALGRRAVALQADLADEAEVRALVARASA 83 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999997444444432 2223334445556778899999999999999999998 5
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
.+++||+||||||.....++.+.+.++|++.++.|+.|++++.+++.+.+. ..+.+|++||..+....++...|+++|
T Consensus 84 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK 163 (258)
T PRK09134 84 ALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSK 163 (258)
T ss_pred HcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHH
Confidence 689999999999998888889999999999999999999999998866543 246899999987777788888999999
Q ss_pred HHHHHHHHHHHHcCC---CeEEEEcccc
Q psy1119 936 SIMERICEARRAEGL---PGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~Gl---p~~ai~~g~~ 960 (1392)
++++++++..+.+.. ...++..|.+
T Consensus 164 ~a~~~~~~~la~~~~~~i~v~~i~PG~v 191 (258)
T PRK09134 164 AALWTATRTLAQALAPRIRVNAIGPGPT 191 (258)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEeecccc
Confidence 999999999877653 4445555443
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.8e-17 Score=188.10 Aligned_cols=180 Identities=21% Similarity=0.171 Sum_probs=149.3
Q ss_pred ccCCCCeEEEEcCcc-hHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-CC-ceEEEEeccCCCHHHHHHHH
Q psy1119 777 YADSNKSYIICGGLG-GFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-YD-VQVLISTDDITTEAGVVNLL 853 (1392)
Q Consensus 777 ~~~~~~~ylItGG~g-GiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-~G-~~v~~~~~Dv~~~~~v~~l~ 853 (1392)
.+..+++++||||+| |||+++|++|+++|++ |++++|+.... +...+.++. .| .++..++||+++++++++++
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~-V~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 88 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGAR-VVISDIHERRL---GETADELAAELGLGRVEAVVCDVTSEAQVDALI 88 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcCCE-EEEEeCCHHHH---HHHHHHHHHhcCCceEEEEEccCCCHHHHHHHH
Confidence 345689999999996 9999999999999997 88888874322 222333333 34 46888999999999999999
Q ss_pred HHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--C-CCeEEEecccccccCCCCCh
Q psy1119 854 TEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--T-LGQFVVFSSVSCGRGNAGQT 929 (1392)
Q Consensus 854 ~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~-l~~fV~~SS~s~~~G~~gq~ 929 (1392)
+++ +.+|++|++|||||......+.+++.++|++.++.|+.|++++.+++.+.+. . .+.||++||+++..+.++..
T Consensus 89 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~ 168 (262)
T PRK07831 89 DAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQA 168 (262)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCc
Confidence 998 6789999999999988778899999999999999999999999888765442 2 57999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 930 NYGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
.|+++|+++++|++..+.+ |....+|..|.+
T Consensus 169 ~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~ 203 (262)
T PRK07831 169 HYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIA 203 (262)
T ss_pred chHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCc
Confidence 9999999999999998876 455666666654
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.1e-17 Score=193.24 Aligned_cols=177 Identities=18% Similarity=0.141 Sum_probs=148.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||+++|+.|+++|++ |++++|+. +..+...++++..|.++..++||+++.+++.++++++ ++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAK-VAILDRNQ---EKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED 84 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCH---HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999999996 88888874 2233445556666788999999999999999999998 66
Q ss_pred cCCccEEEECcccCCC---------------ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEeccccc
Q psy1119 859 LGPVDGIFNLAVVLKD---------------ALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSC 921 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d---------------~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~ 921 (1392)
++++|++|||||+... .++.+++.++|+++++.|+.+++++.+++.+.+. ..+.||++||+++
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~ 164 (278)
T PRK08277 85 FGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNA 164 (278)
T ss_pred cCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchh
Confidence 8999999999996432 3578899999999999999999999887765442 3478999999999
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 922 GRGNAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 922 ~~G~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
..+.++.+.|+++|+++++|++..+.+ |....+|..|.+
T Consensus 165 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v 207 (278)
T PRK08277 165 FTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFF 207 (278)
T ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccC
Confidence 999999999999999999999988776 344555555544
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-17 Score=190.28 Aligned_cols=179 Identities=17% Similarity=0.247 Sum_probs=151.7
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+++++||||+||||..+|++|+++|+++|++++|+... .......+...+.++.++.+|+++++++.++++.+ +
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEK---GEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADE 80 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHH---HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 3678999999999999999999999999888888987422 22334455566888989999999999999999988 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC---CCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT---LGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~---l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+++++|+|||+||+.....+.+.+.++|+.++..|+.|+.++.+++.+.+.. .++||++||.++..|.++.+.|+++
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~s 160 (260)
T PRK06198 81 AFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCAS 160 (260)
T ss_pred HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHH
Confidence 6899999999999988888889999999999999999999998887654422 3799999999999899999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
|+++++|++..+.+ |+...++..|.+
T Consensus 161 K~a~~~~~~~~a~e~~~~~i~v~~i~pg~~ 190 (260)
T PRK06198 161 KGALATLTRNAAYALLRNRIRVNGLNIGWM 190 (260)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeeccc
Confidence 99999999987654 455666666654
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-17 Score=190.95 Aligned_cols=176 Identities=27% Similarity=0.302 Sum_probs=148.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
++++++||||+||||.++|++|+++|++ |++++|+... ......++ ..+.++.++.||++|.++++++++.+.++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~-V~~~~r~~~~---~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 78 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGAR-LLLVGRNAEK---LEALAARL-PYPGRHRWVVADLTSEAGREAVLARAREM 78 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEECCHHH---HHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHhc
Confidence 4689999999999999999999999997 8888887432 22333344 34668889999999999999999988668
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+++|+|||+||.....++.+.+.++|++++++|+.|+.++.+++.+.+. ..++||++||..+..|.++.+.|+++|++
T Consensus 79 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 158 (263)
T PRK09072 79 GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFA 158 (263)
T ss_pred CCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHH
Confidence 9999999999998888899999999999999999999999988866543 34799999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++++++..+.+ |....++..|.+
T Consensus 159 ~~~~~~~l~~~~~~~~i~v~~v~Pg~~ 185 (263)
T PRK09072 159 LRGFSEALRRELADTGVRVLYLAPRAT 185 (263)
T ss_pred HHHHHHHHHHHhcccCcEEEEEecCcc
Confidence 99999888765 455566665544
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-17 Score=190.27 Aligned_cols=175 Identities=22% Similarity=0.199 Sum_probs=146.4
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+. ......+++...|.++..+.||+++.++++++++++ +.
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~-v~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGAR-VVLVDRSE----LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA 81 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCch----HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999997 88888873 122344555666888899999999999999999998 66
Q ss_pred cCCccEEEECcccC-CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~-~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++++|++|||||.. ...++.+++.++|+..++.|+.|++++.+.+.+.+. ..+.||++||.++. .++...|+++|
T Consensus 82 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--~~~~~~Y~~sK 159 (260)
T PRK12823 82 FGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR--GINRVPYSAAK 159 (260)
T ss_pred cCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc--CCCCCccHHHH
Confidence 89999999999864 357889999999999999999999999887766542 34789999998764 34678899999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |.+..+|.+|.+.
T Consensus 160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 189 (260)
T PRK12823 160 GGVNALTASLAFEYAEHGIRVNAVAPGGTE 189 (260)
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEecCccC
Confidence 9999999987665 6778888888764
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.1e-18 Score=191.35 Aligned_cols=172 Identities=22% Similarity=0.211 Sum_probs=141.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||+++|+.|+++|++ |+++.|+.. .. .+.++..+ +.++.||++|+++++++++++ +.
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~-v~~~~~~~~---~~---~~~l~~~~--~~~~~~Dl~~~~~~~~~~~~~~~~ 76 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAK-VAVLYNSAE---NE---AKELREKG--VFTIKCDVGNRDQVKKSKEVVEKE 76 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCcH---HH---HHHHHhCC--CeEEEecCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999997 555555421 11 22233333 667899999999999999998 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEeccccccc-CCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGR-GNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~-G~~gq~~Yaaan 935 (1392)
++++|+||||||+....++.+.+.++|+.+++.|+.|++++.+.+.+.+. ..+.||++||.++.. +.++.+.|+++|
T Consensus 77 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK 156 (255)
T PRK06463 77 FGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITK 156 (255)
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHH
Confidence 89999999999998778899999999999999999999999887765543 457999999998874 457889999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++++|++..+.+ |.+..+|..|.+
T Consensus 157 aa~~~~~~~la~e~~~~~i~v~~i~Pg~v 185 (255)
T PRK06463 157 AGIIILTRRLAFELGKYGIRVNAVAPGWV 185 (255)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCCC
Confidence 9999999998765 566666666655
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-17 Score=193.46 Aligned_cols=178 Identities=14% Similarity=0.121 Sum_probs=147.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||+++|+.|+++|++ |++++|+.. ..+...+++...|.++.++.+|++|.+++.++++.+ +.
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~-Vi~~~R~~~---~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 114 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGAT-VVAVARRED---LLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR 114 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHH---HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999996 888899842 233444555556778889999999999999999998 56
Q ss_pred cCCccEEEECcccCCCccccCC--CHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccC-CCCChhHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQ--TPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRG-NAGQTNYGM 933 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~--t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G-~~gq~~Yaa 933 (1392)
+|+||++|||||+....++.+. +.++|+..++.|+.|++++.+++.+.+. ..++||++||.++..+ .++.+.|++
T Consensus 115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~a 194 (293)
T PRK05866 115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNA 194 (293)
T ss_pred cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHH
Confidence 8999999999999877776654 4688999999999999999988765442 3479999999876653 688899999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+|+++++|++..+.+ |..+.++.+|.+.
T Consensus 195 sKaal~~l~~~la~e~~~~gI~v~~v~pg~v~ 226 (293)
T PRK05866 195 SKAALSAVSRVIETEWGDRGVHSTTLYYPLVA 226 (293)
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEEcCccc
Confidence 999999999988765 6777888887664
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-17 Score=192.18 Aligned_cols=174 Identities=22% Similarity=0.227 Sum_probs=148.1
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
+++|+||||+||||+++|+.|+++|++ |++++|+... .....+ ..+.++.++++|+++.++++++++.+ +.+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~-V~~~~r~~~~---~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDR-VVATARDTAT---LADLAE---KYGDRLLPLALDVTDRAAVFAAVETAVEHF 75 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEECCHHH---HHHHHH---hccCCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999999997 8888887422 111122 22446788899999999999999988 668
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+++|+||||||+....++.+.+.++|++.+++|+.+++++.+++.+.+. ..++||++||.++..+.++++.|+++|++
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa 155 (275)
T PRK08263 76 GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWA 155 (275)
T ss_pred CCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHH
Confidence 9999999999999888999999999999999999999999988755442 45799999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++.+++..+.+ |++...+..|.+.
T Consensus 156 ~~~~~~~la~e~~~~gi~v~~v~Pg~~~ 183 (275)
T PRK08263 156 LEGMSEALAQEVAEFGIKVTLVEPGGYS 183 (275)
T ss_pred HHHHHHHHHHHhhhhCcEEEEEecCCcc
Confidence 99999887664 7888888887663
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-17 Score=191.71 Aligned_cols=178 Identities=19% Similarity=0.132 Sum_probs=148.5
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccH----HHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNG----YQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~----~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
.+++++||||+||||.++|++|+++|++ |++++|+..... ......++++..|.++.++.||+++.++++++++.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGAN-IVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 5689999999999999999999999996 888888753211 12233344556688899999999999999999998
Q ss_pred H-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCC--CCChh
Q psy1119 856 A-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGN--AGQTN 930 (1392)
Q Consensus 856 ~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~--~gq~~ 930 (1392)
+ +.++++|+||||||.....++.+.+.++|+++++.|+.|++++.+++.+++. ..+.+|++||..+..+. ++.+.
T Consensus 84 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~ 163 (273)
T PRK08278 84 AVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTA 163 (273)
T ss_pred HHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcch
Confidence 7 6689999999999998888899999999999999999999999998876543 24689999999888777 88999
Q ss_pred HHHHHHHHHHHHHHHHHc----CCCeEEEEcc
Q psy1119 931 YGMANSIMERICEARRAE----GLPGLAVEWG 958 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~----Glp~~ai~~g 958 (1392)
|+++|++++.|++..+.+ |....+|..|
T Consensus 164 Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg 195 (273)
T PRK08278 164 YTMAKYGMSLCTLGLAEEFRDDGIAVNALWPR 195 (273)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCC
Confidence 999999999999988776 3444555554
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.6e-17 Score=189.80 Aligned_cols=175 Identities=17% Similarity=0.169 Sum_probs=147.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-CCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-YDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
.+++++||||+||||+++|++|+++|++ |++++|+..+ .+...++++. .+.++.++.+|++++++++++++.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~-V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~--- 78 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCH-LHLVARDADA---LEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE--- 78 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHH---HHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH---
Confidence 4799999999999999999999999995 8888987432 2233344443 366788899999999999888764
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|++|||||+....++.+++.++|+..++.|+.|.+++.+++.+.+. +.+.+|++||.++..+.++...|+++|+
T Consensus 79 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~ 158 (259)
T PRK06125 79 AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNA 158 (259)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHH
Confidence 58999999999998888999999999999999999999999998766553 2378999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |..+.+|..|.+.
T Consensus 159 al~~~~~~la~e~~~~gi~v~~i~PG~v~ 187 (259)
T PRK06125 159 ALMAFTRALGGKSLDDGVRVVGVNPGPVA 187 (259)
T ss_pred HHHHHHHHHHHHhCccCeEEEEEecCccc
Confidence 999999988764 5566777777654
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.3e-17 Score=190.35 Aligned_cols=175 Identities=17% Similarity=0.128 Sum_probs=141.4
Q ss_pred CCCeEEEEcC--cchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 780 SNKSYIICGG--LGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 780 ~~~~ylItGG--~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
.+++++|||| ++|||+++|+.|+++|++ |++++|+.. .+..++..+++ +.++.+++||++|+++++++++++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~-v~l~~r~~~-~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~ 80 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAE-VVLTGFGRA-LRLTERIAKRL---PEPAPVLELDVTNEEHLASLADRVR 80 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCE-EEEecCccc-hhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHHH
Confidence 4689999999 899999999999999997 888887631 11122222222 335778899999999999999998
Q ss_pred hhcCCccEEEECcccCCC----ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHH
Q psy1119 857 NKLGPVDGIFNLAVVLKD----ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d----~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
+++|+||++|||||+... ..+.+.+.++|+++++.|+.|++++.+++.+++.+.+.+|++||. +..+.++++.|+
T Consensus 81 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~-~~~~~~~~~~Y~ 159 (256)
T PRK07889 81 EHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFD-ATVAWPAYDWMG 159 (256)
T ss_pred HHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeec-ccccCCccchhH
Confidence 668999999999998743 467889999999999999999999999887776666889998875 456778889999
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++|+++.+|++..+.+ |..+.+|..|.+
T Consensus 160 asKaal~~l~~~la~el~~~gIrvn~v~PG~v 191 (256)
T PRK07889 160 VAKAALESTNRYLARDLGPRGIRVNLVAAGPI 191 (256)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEeeccCcc
Confidence 9999999999998876 444556666655
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.2e-17 Score=186.63 Aligned_cols=177 Identities=24% Similarity=0.283 Sum_probs=148.7
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g 860 (1392)
++++||||+||||+++|++|+++|++ |+++.|+.. +........+...+.++.++.||+++.+++.++++.+ ++++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~-vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 79 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYR-VIATYFSGN--DCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEG 79 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCcH--HHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 68999999999999999999999986 788888742 2233333444445677889999999999999999998 6689
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
++|++||+||......+.+.+.++|+..++.|+.|++++.+++.+.+ ...++||++||..+..+.++++.|+++|+++
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~ 159 (245)
T PRK12824 80 PVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGM 159 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHH
Confidence 99999999999888889999999999999999999999988775543 2457999999999999999999999999999
Q ss_pred HHHHHHHHH----cCCCeEEEEccccC
Q psy1119 939 ERICEARRA----EGLPGLAVEWGAVG 961 (1392)
Q Consensus 939 d~la~~r~~----~Glp~~ai~~g~~~ 961 (1392)
+.|++..+. .|.+..++.+|.+.
T Consensus 160 ~~~~~~l~~~~~~~~i~v~~v~pg~~~ 186 (245)
T PRK12824 160 IGFTKALASEGARYGITVNCIAPGYIA 186 (245)
T ss_pred HHHHHHHHHHHHHhCeEEEEEEEcccC
Confidence 988887654 36677777777653
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.4e-17 Score=186.47 Aligned_cols=176 Identities=19% Similarity=0.152 Sum_probs=148.4
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.+++++|||||+||||.++|++|+++|++ |++++|+... ......+. +.++..+.+|+++.++++++++++ +
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~-Vi~~~r~~~~----~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGAR-VALLDRSEDV----AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVIS 85 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHH----HHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999997 8888997421 12222222 445678999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
.++++|+||||||.....++.+.+.++|++.++.|+.|++++.+++.+.+. ..++||++||+.+..|.++++.|+++|
T Consensus 86 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 165 (255)
T PRK06841 86 AFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASK 165 (255)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHH
Confidence 689999999999998778888999999999999999999999998866542 357999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++.+++..+.+ |....+|..|.+.
T Consensus 166 ~a~~~~~~~la~e~~~~gi~v~~v~pg~v~ 195 (255)
T PRK06841 166 AGVVGMTKVLALEWGPYGITVNAISPTVVL 195 (255)
T ss_pred HHHHHHHHHHHHHHHhhCeEEEEEEeCcCc
Confidence 9999999988775 5666777776653
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.3e-17 Score=186.18 Aligned_cols=177 Identities=21% Similarity=0.311 Sum_probs=148.0
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g 860 (1392)
+++|||||+||||.++|++|+++|++ +++++|+. ........+++...+.++.++.||++++++++++++++ +.++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~-v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYR-VAANCGPN--EERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELG 77 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCC--HHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 58999999999999999999999997 66666631 22233344445555778899999999999999999988 5689
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
++|+||||||+.....+.+.+.++|...++.|+.+++++.+.+.+.+. ..++||++||.++..|.+++..|+++|+++
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~ 157 (242)
T TIGR01829 78 PIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGM 157 (242)
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHH
Confidence 999999999998888899999999999999999999998887765542 347999999999999999999999999988
Q ss_pred HHHHHHHHHc----CCCeEEEEccccC
Q psy1119 939 ERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 939 d~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+.+++..+.+ |++..++.+|.+.
T Consensus 158 ~~~~~~la~~~~~~~i~v~~i~pg~~~ 184 (242)
T TIGR01829 158 IGFTKALAQEGATKGVTVNTISPGYIA 184 (242)
T ss_pred HHHHHHHHHHhhhhCeEEEEEeeCCCc
Confidence 8888776543 6777888877764
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.2e-17 Score=190.43 Aligned_cols=173 Identities=21% Similarity=0.191 Sum_probs=146.2
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
.+++|||||+||||+++|++|+++|++ |+++.|+.. ...... ...+.++.+++||++|.++++++++++ +.+
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~-v~~~~r~~~---~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDR-VAATVRRPD---ALDDLK---ARYGDRLWVLQLDVTDSAAVRAVVDRAFAAL 74 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHH---HhccCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 368999999999999999999999997 777888731 111111 122456888999999999999999987 668
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+++|+||||||......+.+.+.++|++.+++|+.|+.++.+++.+.+. ..++||++||.++..+.++.+.|+++|++
T Consensus 75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 154 (276)
T PRK06482 75 GRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWG 154 (276)
T ss_pred CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHH
Confidence 9999999999998888888999999999999999999999988755432 35799999999998899999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++.|++..+.+ |++...+..|.+
T Consensus 155 ~~~~~~~l~~~~~~~gi~v~~v~pg~~ 181 (276)
T PRK06482 155 IEGFVEAVAQEVAPFGIEFTIVEPGPA 181 (276)
T ss_pred HHHHHHHHHHHhhccCcEEEEEeCCcc
Confidence 99999887765 888888888765
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.7e-17 Score=183.68 Aligned_cols=182 Identities=22% Similarity=0.264 Sum_probs=152.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcc-cHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVK-NGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~-~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.+++++||||+||||+++|++|+++|++ ++++.|+..+ ........+++...+.++.++.||+++.++++++++.+ +
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGAD-VIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999997 6665553222 22233344556666788999999999999999999988 5
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHh-hhCC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSR-TMCP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~-~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
.++++|+|||+||...+..+.+.+.++|...+++|+.|++++.+++. +++. ..++||++||.++..|.+++..|+++
T Consensus 84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~s 163 (249)
T PRK12827 84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAAS 163 (249)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHH
Confidence 67899999999999888899999999999999999999999998886 4332 34789999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
|++++.+++..+.+ |++..++..|.+..
T Consensus 164 K~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t 195 (249)
T PRK12827 164 KAGLIGLTKTLANELAPRGITVNAVAPGAINT 195 (249)
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEEECCcCC
Confidence 99999998877654 78888888887654
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.7e-17 Score=186.30 Aligned_cols=177 Identities=23% Similarity=0.268 Sum_probs=151.5
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
++++|||||+||||+++|++|+++|++ |++++|+... .+...+.+...+.++.++.||+++.++++++++.+ +++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~-Vi~~~r~~~~---~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 76 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQ-LVLAARNETR---LASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF 76 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999996 8888887422 23344556666778999999999999999999998 668
Q ss_pred CCccEEEECcccCCCccccCC-CHHHHHHHHhhHhHHHHHHHHHHhhhC-CCCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQ-TPEDFNASLGPKANATKYFDKYSRTMC-PTLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~-t~e~~~~~~~~kv~g~~~L~~~~~~~~-~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+++|+||||||......+.+. +.++|.+.+++|+.|+.++.+.+.+.+ ...+.||++||.++..+.++++.|+++|++
T Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~ 156 (263)
T PRK06181 77 GGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHA 156 (263)
T ss_pred CCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHHH
Confidence 999999999999888888888 999999999999999999988876543 345899999999999999999999999999
Q ss_pred HHHHHHHHHH----cCCCeEEEEccccC
Q psy1119 938 MERICEARRA----EGLPGLAVEWGAVG 961 (1392)
Q Consensus 938 ld~la~~r~~----~Glp~~ai~~g~~~ 961 (1392)
++.+++..+. .|+...++..|.+.
T Consensus 157 ~~~~~~~l~~~~~~~~i~~~~i~pg~v~ 184 (263)
T PRK06181 157 LHGFFDSLRIELADDGVAVTVVCPGFVA 184 (263)
T ss_pred HHHHHHHHHHHhhhcCceEEEEecCccc
Confidence 9999987654 37778888877654
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.8e-17 Score=187.78 Aligned_cols=177 Identities=23% Similarity=0.284 Sum_probs=146.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
+++++|||||+||||.++|++|+++|++ |++++|+.. ......+.++..+.++.++.||++|+++++++++++ +.
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~-V~~~~r~~~---~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~ 86 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGAR-VVLSARKAE---ELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER 86 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHH---HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999996 888888742 223334455566778889999999999999999998 56
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhh-C--CCCCeEEEecccccccCCCCC----hhH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTM-C--PTLGQFVVFSSVSCGRGNAGQ----TNY 931 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~-~--~~l~~fV~~SS~s~~~G~~gq----~~Y 931 (1392)
++++|+||||||.....++.+.+.+.|++++++|+.|++++.+++.+. + .+.++||++||.++..|.+++ +.|
T Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y 166 (259)
T PRK08213 87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAY 166 (259)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchH
Confidence 899999999999877778888999999999999999999999987554 2 234799999999988877654 999
Q ss_pred HHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 932 GMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++|++++.+++..+.+ |.+..++..|.+
T Consensus 167 ~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~ 199 (259)
T PRK08213 167 NTSKGAVINFTRALAAEWGPHGIRVNAIAPGFF 199 (259)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEecCcC
Confidence 99999999999987665 455556655544
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.8e-17 Score=189.79 Aligned_cols=170 Identities=16% Similarity=0.167 Sum_probs=139.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++++||||+||||+++|+.|+++|++ |++++|+... .+... ...+.++..+.||+++.++++++++++ ++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~---~~~l~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGAR-VAVLDKSAAG---LQELE---AAHGDAVVGVEGDVRSLDDHKEAVARCVAA 76 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHH---hhcCCceEEEEeccCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 7888887421 11111 123667888999999999999999997 67
Q ss_pred cCCccEEEECcccCC-CccccCCCH----HHHHHHHhhHhHHHHHHHHHHhhhC-CCCCeEEEecccccccCCCCChhHH
Q psy1119 859 LGPVDGIFNLAVVLK-DALFENQTP----EDFNASLGPKANATKYFDKYSRTMC-PTLGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~-d~~~~~~t~----e~~~~~~~~kv~g~~~L~~~~~~~~-~~l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
+++||++|||||+.. ..++.+.+. ++|++.++.|+.|++++.+++.+.+ +..+.+|++||.++..+.++.+.|+
T Consensus 77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~ 156 (262)
T TIGR03325 77 FGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYT 156 (262)
T ss_pred hCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCCchhH
Confidence 899999999999753 345555554 5799999999999999999887654 3347899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEE
Q psy1119 933 MANSIMERICEARRAEGLPGLAVE 956 (1392)
Q Consensus 933 aana~ld~la~~r~~~Glp~~ai~ 956 (1392)
++|+++++|++..+.+..|.+.++
T Consensus 157 ~sKaa~~~l~~~la~e~~~~irvn 180 (262)
T TIGR03325 157 AAKHAVVGLVKELAFELAPYVRVN 180 (262)
T ss_pred HHHHHHHHHHHHHHHhhccCeEEE
Confidence 999999999999988865533333
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.9e-17 Score=185.54 Aligned_cols=178 Identities=19% Similarity=0.174 Sum_probs=149.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ +++..|+.. .......+.++..|.++..+.||+++.+++.++++++ +.
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~-v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSL-VVVNAKKRA--EEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR 81 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCCh--HHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999997 555555421 2233344556667788889999999999999999998 56
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
++++|+||||||.....++.+.+.+.|+..+++|+.|++++.+++.+.+.+.+.||++||.++..+.++++.|+++|+++
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~ 161 (252)
T PRK06077 82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAAV 161 (252)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHHHHHHH
Confidence 89999999999998888888999999999999999999999998877655568999999999999999999999999999
Q ss_pred HHHHHHHHHcCCC---eEEEEcccc
Q psy1119 939 ERICEARRAEGLP---GLAVEWGAV 960 (1392)
Q Consensus 939 d~la~~r~~~Glp---~~ai~~g~~ 960 (1392)
+++++..+.+.-| ...+.+|.+
T Consensus 162 ~~~~~~l~~~~~~~i~v~~v~Pg~i 186 (252)
T PRK06077 162 INLTKYLALELAPKIRVNAIAPGFV 186 (252)
T ss_pred HHHHHHHHHHHhcCCEEEEEeeCCc
Confidence 9999998777433 444555443
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4e-17 Score=184.10 Aligned_cols=179 Identities=20% Similarity=0.228 Sum_probs=151.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||+++|+.|+++|++ |++++|+... .....++++..+.++.++.+|++++++++++++.+ +.
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~-Vi~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVN-VGLLARTEEN---LKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE 81 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3689999999999999999999999995 8889998532 23334455556778999999999999999999998 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+++||+|||+||......+.+.+.++|++.+++|+.|++++.+++.+.+ ...+.+|++||.++..+.++...|+++|+
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 161 (239)
T PRK07666 82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKF 161 (239)
T ss_pred cCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHH
Confidence 8999999999998777778889999999999999999999998876543 23478999999999999999999999999
Q ss_pred HHHHHHHHHHH----cCCCeEEEEccccCc
Q psy1119 937 IMERICEARRA----EGLPGLAVEWGAVGE 962 (1392)
Q Consensus 937 ~ld~la~~r~~----~Glp~~ai~~g~~~~ 962 (1392)
+++.+++..+. .|++...+..|.+..
T Consensus 162 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t 191 (239)
T PRK07666 162 GVLGLTESLMQEVRKHNIRVTALTPSTVAT 191 (239)
T ss_pred HHHHHHHHHHHHhhccCcEEEEEecCcccC
Confidence 99999886554 478888888876643
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.8e-17 Score=186.37 Aligned_cols=177 Identities=16% Similarity=0.177 Sum_probs=150.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++++||||+||||+++|+.|+++|++ +++++|+.. ......+.++..+.++.++.+|++++++++++++++ +.
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~-v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGAT-VAFNDGLAA---EARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEeCCHH---HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999997 777787742 223344555666778999999999999999999998 56
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|+||||||+.....+.+.+.++|+..+..|+.|++++.+++.+.+. ..++||++||.++..+.++...|+++|+
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~ 161 (250)
T PRK12939 82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKG 161 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHH
Confidence 79999999999998888899999999999999999999999988765442 3579999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++.+++..+.+ +++..++..|.+
T Consensus 162 ~~~~~~~~l~~~~~~~~i~v~~v~pg~v 189 (250)
T PRK12939 162 AVIGMTRSLARELGGRGITVNAIAPGLT 189 (250)
T ss_pred HHHHHHHHHHHHHhhhCEEEEEEEECCC
Confidence 999999876543 566677777755
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.9e-17 Score=185.92 Aligned_cols=177 Identities=19% Similarity=0.208 Sum_probs=146.2
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g 860 (1392)
+++|||||+||||++++++|+++|++.+++..|+. ....+...+++..|.++..++||++|+++++++++.+ +.++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 78 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNL---HAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDE 78 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCh---HHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 58999999999999999999999998545456653 2233445556666778889999999999999999998 5689
Q ss_pred CccEEEECcccC-CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-C----CCCeEEEecccccccCCCCC-hhHHH
Q psy1119 861 PVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYFDKYSRTMC-P----TLGQFVVFSSVSCGRGNAGQ-TNYGM 933 (1392)
Q Consensus 861 ~I~gvi~~Agv~-~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~----~l~~fV~~SS~s~~~G~~gq-~~Yaa 933 (1392)
+||+|||+||.. ....+.+++.++|+..+++|+.|++++.+++.+.+ . ..+.||++||.++..|.+++ ..|++
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~ 158 (247)
T PRK09730 79 PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAA 158 (247)
T ss_pred CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHh
Confidence 999999999986 45678899999999999999999999887664432 1 23679999999999998875 78999
Q ss_pred HHHHHHHHHHHHHH----cCCCeEEEEccccC
Q psy1119 934 ANSIMERICEARRA----EGLPGLAVEWGAVG 961 (1392)
Q Consensus 934 ana~ld~la~~r~~----~Glp~~ai~~g~~~ 961 (1392)
+|++++.+++..+. .|++..++..|.+.
T Consensus 159 sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~ 190 (247)
T PRK09730 159 SKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIY 190 (247)
T ss_pred HHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCc
Confidence 99999999987664 47888888888764
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.8e-17 Score=189.84 Aligned_cols=172 Identities=18% Similarity=0.170 Sum_probs=145.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||+++|++|+++|++ |++++|+... .+++...+ +.++.+|++|.++++++++.+ +.
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~-Vi~~~r~~~~-------~~~l~~~~--~~~~~~Dl~d~~~~~~~~~~~~~~ 72 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWR-VFATCRKEED-------VAALEAEG--LEAFQLDYAEPESIAALVAQVLEL 72 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHH-------HHHHHHCC--ceEEEccCCCHHHHHHHHHHHHHH
Confidence 3579999999999999999999999997 8888887421 12233334 567899999999999999998 44
Q ss_pred c-CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 L-GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~-g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+ ++||.||||||+...+.+.+.+.++|+..+++|+.|+.++.+.+.+.+. ..+.||++||+++..+.++.+.|+++|
T Consensus 73 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 152 (277)
T PRK05993 73 SGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASK 152 (277)
T ss_pred cCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHH
Confidence 4 6999999999998888999999999999999999999998877766553 347999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |....++..|.+.
T Consensus 153 ~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~ 182 (277)
T PRK05993 153 FAIEGLSLTLRMELQGSGIHVSLIEPGPIE 182 (277)
T ss_pred HHHHHHHHHHHHHhhhhCCEEEEEecCCcc
Confidence 9999999987644 7777888877653
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2e-17 Score=190.10 Aligned_cols=170 Identities=21% Similarity=0.139 Sum_probs=146.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||+++|+.|+++|++ |++++|+..... ....+.++.||++|+++++++++.+ +.
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~-V~~~~r~~~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 70 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYR-VFGTSRNPARAA-----------PIPGVELLELDVTDDASVQAAVDEVIAR 70 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCChhhcc-----------ccCCCeeEEeecCCHHHHHHHHHHHHHh
Confidence 3578999999999999999999999997 888888742211 1124677899999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|++|+||||||+...+.+.+.+.++|++.+++|+.|+.++.+++.+.+. ..++||++||.++..+.++++.|+++|+
T Consensus 71 ~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 150 (270)
T PRK06179 71 AGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKH 150 (270)
T ss_pred CCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHH
Confidence 89999999999998888999999999999999999999999988766543 4589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++.|++..+.+ |++..++..|.+.
T Consensus 151 a~~~~~~~l~~el~~~gi~v~~v~pg~~~ 179 (270)
T PRK06179 151 AVEGYSESLDHEVRQFGIRVSLVEPAYTK 179 (270)
T ss_pred HHHHHHHHHHHHHhhhCcEEEEEeCCCcc
Confidence 999999987654 8888888877654
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.3e-17 Score=187.23 Aligned_cols=173 Identities=20% Similarity=0.243 Sum_probs=141.5
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcCC
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLGP 861 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g~ 861 (1392)
++|||||++|||+++|+.|+++|++ |++++|+... .....++++..+ ++..++||++|.++++++++++ +++++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~-V~~~~r~~~~---~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~ 76 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGAR-VVISSRNEEN---LEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELLGG 76 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCE-EEEEeCCHHH---HHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 5899999999999999999999996 8888988432 233344454444 6788999999999999999998 67899
Q ss_pred ccEEEECcccCC--CccccCCCHHHHHHHHhhHhHHHHHHHHHHhh-hC--CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 862 VDGIFNLAVVLK--DALFENQTPEDFNASLGPKANATKYFDKYSRT-MC--PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 862 I~gvi~~Agv~~--d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~-~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
||+||||||+.. ...+.+.+.++|.+.+..|+.+++.+.+.+.+ +. ...+.||++||.++..+.++...|+++|+
T Consensus 77 id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKa 156 (259)
T PRK08340 77 IDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRA 156 (259)
T ss_pred CCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHH
Confidence 999999999854 35688899999999999999999888766543 32 23579999999999999999999999999
Q ss_pred HHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 937 IMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
++.+|++..+.+. ..+.+|..|.+
T Consensus 157 a~~~~~~~la~e~~~~gI~v~~v~pG~v 184 (259)
T PRK08340 157 GLVQLAKGVSRTYGGKGIRAYTVLLGSF 184 (259)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEeccCcc
Confidence 9999999988863 33455555544
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.7e-17 Score=189.53 Aligned_cols=170 Identities=19% Similarity=0.161 Sum_probs=144.8
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g 860 (1392)
+++|||||+||||.++|++|+++|++ |++++|+... .+.+...+ +..+.||+++.++++++++.+ +.++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~-V~~~~r~~~~-------~~~~~~~~--~~~~~~Dl~~~~~~~~~~~~~~~~~~ 71 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYE-VWATARKAED-------VEALAAAG--FTAVQLDVNDGAALARLAEELEAEHG 71 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCE-EEEEeCCHHH-------HHHHHHCC--CeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 68999999999999999999999997 8888887421 12223334 457889999999999999998 6689
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHHHHHHHH
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMANSIME 939 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld 939 (1392)
++|+||||||....+++.+.+.++|+..+++|+.|+.++.+++.+.+. ..++||++||+++..+.++.+.|+++|++++
T Consensus 72 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~ 151 (274)
T PRK05693 72 GLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVH 151 (274)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHHH
Confidence 999999999998878889999999999999999999999988766543 3489999999999999999999999999999
Q ss_pred HHHHHHHHc----CCCeEEEEccccC
Q psy1119 940 RICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 940 ~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+|++..+.+ |....++..|.+.
T Consensus 152 ~~~~~l~~e~~~~gi~v~~v~pg~v~ 177 (274)
T PRK05693 152 ALSDALRLELAPFGVQVMEVQPGAIA 177 (274)
T ss_pred HHHHHHHHHhhhhCeEEEEEecCccc
Confidence 999887664 7777788777663
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.9e-17 Score=194.37 Aligned_cols=178 Identities=20% Similarity=0.233 Sum_probs=143.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS--YDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~--~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
..+++++||||++|||+++|+.|+++|++ |++++|+..+. ++.++++.. .+.++.++.||+++.++++++++++
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~~-Vil~~R~~~~~---~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~ 87 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGAE-VILPVRNRAKG---EAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQL 87 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHH---HHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHH
Confidence 46799999999999999999999999996 88889985332 233344432 2457888999999999999999998
Q ss_pred -hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCC---------
Q psy1119 857 -NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGN--------- 925 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~--------- 925 (1392)
+.+++||++|||||+... ...+.+.+.|+..+++|+.|.++|.+.+.+.+. ..+.||++||.++..+.
T Consensus 88 ~~~~~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~ 166 (313)
T PRK05854 88 RAEGRPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWE 166 (313)
T ss_pred HHhCCCccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccccccc
Confidence 668999999999998653 345678899999999999999999988866543 34789999999887653
Q ss_pred ---CCChhHHHHHHHHHHHHHHHHHc------CCCeEEEEccccC
Q psy1119 926 ---AGQTNYGMANSIMERICEARRAE------GLPGLAVEWGAVG 961 (1392)
Q Consensus 926 ---~gq~~Yaaana~ld~la~~r~~~------Glp~~ai~~g~~~ 961 (1392)
++...|+++|+++..|++..+.+ |..+.+++.|.+.
T Consensus 167 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~ 211 (313)
T PRK05854 167 RSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAP 211 (313)
T ss_pred ccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceec
Confidence 56789999999999999977542 4566777777664
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.2e-17 Score=185.14 Aligned_cols=170 Identities=12% Similarity=0.065 Sum_probs=141.8
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
++++||||+||||+++|++|+++|++ |++++|+.. ..+++...+.++.+++||+++.++++++++++.. .
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~-V~~~~r~~~-------~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~ 71 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQ-VIACGRNQS-------VLDELHTQSANIFTLAFDVTDHPGTKAALSQLPF--I 71 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCE-EEEEECCHH-------HHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhccc--C
Confidence 78999999999999999999999997 888888731 1222333345678899999999999999987643 4
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHHH
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERI 941 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~l 941 (1392)
+|.+|||||........+++.++|++++++|+.|+.++.+++.+++.+.+.||++||+++..+.+++..|+++|+++++|
T Consensus 72 ~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 151 (240)
T PRK06101 72 PELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYF 151 (240)
T ss_pred CCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHHHHHHH
Confidence 68999999875444556789999999999999999999998877665567899999999999999999999999999999
Q ss_pred HHHHHH----cCCCeEEEEccccC
Q psy1119 942 CEARRA----EGLPGLAVEWGAVG 961 (1392)
Q Consensus 942 a~~r~~----~Glp~~ai~~g~~~ 961 (1392)
++..+. .|+...++..|.+.
T Consensus 152 ~~~l~~e~~~~gi~v~~v~pg~i~ 175 (240)
T PRK06101 152 ARTLQLDLRPKGIEVVTVFPGFVA 175 (240)
T ss_pred HHHHHHHHHhcCceEEEEeCCcCC
Confidence 997764 47778888877764
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.3e-17 Score=188.96 Aligned_cols=166 Identities=19% Similarity=0.215 Sum_probs=139.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
+++++|||||++|||+++|++|+++|++ |++++|+... .+...+ ..+.++..+.||+++.++++++++++ +.
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~---~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGAR-VAVLERSAEK---LASLRQ---RFGDHVLVVEGDVTSYADNQRAVDQTVDA 77 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHH---HhCCcceEEEccCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999999997 8888887422 222222 22456788899999999999999998 67
Q ss_pred cCCccEEEECcccCC-CccccCCCHHH----HHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHH
Q psy1119 859 LGPVDGIFNLAVVLK-DALFENQTPED----FNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~-d~~~~~~t~e~----~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
+++||++|||||+.. ..++.+++.++ |+++++.|+.|++++.+++.+.+. ..+.+|++||+++..+.++...|+
T Consensus 78 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~ 157 (263)
T PRK06200 78 FGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYT 157 (263)
T ss_pred cCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhH
Confidence 899999999999864 45677888776 999999999999999988866543 347899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCe
Q psy1119 933 MANSIMERICEARRAEGLPG 952 (1392)
Q Consensus 933 aana~ld~la~~r~~~Glp~ 952 (1392)
++|+++++|++..+.+..|.
T Consensus 158 ~sK~a~~~~~~~la~el~~~ 177 (263)
T PRK06200 158 ASKHAVVGLVRQLAYELAPK 177 (263)
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 99999999999988875443
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.8e-17 Score=188.94 Aligned_cols=177 Identities=19% Similarity=0.223 Sum_probs=148.0
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC--CceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY--DVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~--G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
++++|||||+||||.++|++|+++|++ |++++|+.... +...++.... +.++.++.||++|++++++ ++++ +
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~-V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~ 77 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYL-VIATMRNPEKQ---ENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLK 77 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCE-EEEEeCCHHHH---HHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHH
Confidence 578999999999999999999999997 77788874322 2222333332 3578889999999999999 8877 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
.++++|+||||||....+.+.+.+.++|++.+.+|+.|++++.+.+.+.+. ..+.||++||.++..|.++++.|+++|
T Consensus 78 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 157 (280)
T PRK06914 78 EIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSK 157 (280)
T ss_pred hcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhH
Confidence 789999999999998888888999999999999999999999888765542 347899999999999999999999999
Q ss_pred HHHHHHHHHHHH----cCCCeEEEEccccCc
Q psy1119 936 SIMERICEARRA----EGLPGLAVEWGAVGE 962 (1392)
Q Consensus 936 a~ld~la~~r~~----~Glp~~ai~~g~~~~ 962 (1392)
++++.|++.++. .|.+...+..|.+..
T Consensus 158 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t 188 (280)
T PRK06914 158 YALEGFSESLRLELKPFGIDVALIEPGSYNT 188 (280)
T ss_pred HHHHHHHHHHHHHhhhhCCEEEEEecCCccc
Confidence 999999998763 477888888876643
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.7e-17 Score=186.03 Aligned_cols=178 Identities=17% Similarity=0.122 Sum_probs=150.5
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+.. ...+..+.++..|.++.++.+|+++.++++++++.+ ..
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~-v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAA-VAIADLNQD---GANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER 81 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCChH---HHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999997 888888752 233344556667888999999999999999999987 56
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-C--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC-P--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++++|+||||||......+.+.+.++|++.+++|+.|++.+.+.+.+.+ . +.+.||++||+++..+.+++..|+++|
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk 161 (262)
T PRK13394 82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAK 161 (262)
T ss_pred cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHH
Confidence 8999999999999888888889999999999999999988877765544 2 357999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++++++..+.+ |....++.+|.+-
T Consensus 162 ~a~~~~~~~la~~~~~~~i~v~~v~pg~v~ 191 (262)
T PRK13394 162 HGLLGLARVLAKEGAKHNVRSHVVCPGFVR 191 (262)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCccc
Confidence 9999999877654 5666777776553
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.6e-17 Score=192.19 Aligned_cols=176 Identities=16% Similarity=0.091 Sum_probs=138.5
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC--CceEEEEeccCCC--HHHHHHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY--DVQVLISTDDITT--EAGVVNLLTE 855 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~--G~~v~~~~~Dv~~--~~~v~~l~~~ 855 (1392)
.+++++||||++|||+++|+.|+++|++ |++++|+... .++..++++.. +.++..+.+|+++ .+.++++.+.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~-Vil~~R~~~~---l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~ 127 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLN-LVLVARNPDK---LKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKET 127 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCC-EEEEECCHHH---HHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHH
Confidence 3689999999999999999999999996 8889998533 23333444432 4678889999985 3444444443
Q ss_pred HhhcCCccEEEECcccCCC--ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEeccccccc--CCCCCh
Q psy1119 856 ANKLGPVDGIFNLAVVLKD--ALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGR--GNAGQT 929 (1392)
Q Consensus 856 ~~~~g~I~gvi~~Agv~~d--~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~--G~~gq~ 929 (1392)
... .+||++|||||+... ..+.+++.++|++.+++|+.|+.++.+++.+.+ ...+.||++||.++.. +.++++
T Consensus 128 ~~~-~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~ 206 (320)
T PLN02780 128 IEG-LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYA 206 (320)
T ss_pred hcC-CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccch
Confidence 322 257799999998753 468899999999999999999999999886654 2458999999999975 468999
Q ss_pred hHHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 930 NYGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
.|+++|+++++|++..+.+ |..+.++..|.+
T Consensus 207 ~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v 241 (320)
T PLN02780 207 VYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYV 241 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCce
Confidence 9999999999999998876 566667777665
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.3e-17 Score=183.60 Aligned_cols=178 Identities=22% Similarity=0.264 Sum_probs=148.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||++++++|+++|++ |+++.|+.. .......++++..+.++..+.+|+++.+++.++++++ +.
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~-v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGAN-VVINYASSE--AGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCch--hHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999998 555566532 2233344556666788999999999999999999988 56
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|+|||+||......+.+.+.+.|...+.+|+.+++++.+++.+.+. +.+.||++||.++..|.++...|+++|+
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~ 160 (248)
T PRK05557 81 FGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKA 160 (248)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHH
Confidence 88999999999998888888999999999999999999999998866542 2367999999999999999999999999
Q ss_pred HHHHHHHHHH----HcCCCeEEEEcccc
Q psy1119 937 IMERICEARR----AEGLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~----~~Glp~~ai~~g~~ 960 (1392)
+++.+++..+ ..|++..++.+|.+
T Consensus 161 a~~~~~~~~a~~~~~~~i~~~~v~pg~~ 188 (248)
T PRK05557 161 GVIGFTKSLARELASRGITVNAVAPGFI 188 (248)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEecCcc
Confidence 9998777554 34777788887765
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-16 Score=181.03 Aligned_cols=172 Identities=16% Similarity=0.243 Sum_probs=142.9
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcCC
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLGP 861 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g~ 861 (1392)
+++||||+||||.++|++|+++|++ |++++|+... .....+ ..+.++..+.||+++.++++++++.+ +.+++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~-V~~~~r~~~~---~~~~~~---~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~ 74 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHK-VIATGRRQER---LQELKD---ELGDNLYIAQLDVRNRAAIEEMLASLPAEWRN 74 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCE-EEEEECCHHH---HHHHHH---HhccceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 6899999999999999999999997 8888887422 111112 23557888999999999999999988 66899
Q ss_pred ccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 862 VDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 862 I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
+|+|||+||... ..++.+.+.++|++.++.|+.|++++.+.+.+.+ .+.++||++||.++..+.++.+.|+++|+++
T Consensus 75 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~ 154 (248)
T PRK10538 75 IDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFV 154 (248)
T ss_pred CCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHH
Confidence 999999999753 4678889999999999999999999988876654 2457999999999999999999999999999
Q ss_pred HHHHHHHHHc----CCCeEEEEccccC
Q psy1119 939 ERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 939 d~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+.|++..+.+ |....+|..|.+.
T Consensus 155 ~~~~~~l~~~~~~~~i~v~~v~pg~i~ 181 (248)
T PRK10538 155 RQFSLNLRTDLHGTAVRVTDIEPGLVG 181 (248)
T ss_pred HHHHHHHHHHhcCCCcEEEEEeCCeec
Confidence 9999988765 4555666666664
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.3e-17 Score=184.83 Aligned_cols=178 Identities=16% Similarity=0.191 Sum_probs=144.5
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g 860 (1392)
++++||||+||||.++|++|+++|++.+++..|+. +..+....+++..+.++..+.||+++.++++++++++ +.++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDA---AAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFG 79 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 68999999999999999999999998444444542 2233344555666778999999999999999999998 5689
Q ss_pred CccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-C----CCeEEEecccccccCCCC-ChhHHH
Q psy1119 861 PVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-T----LGQFVVFSSVSCGRGNAG-QTNYGM 933 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~----l~~fV~~SS~s~~~G~~g-q~~Yaa 933 (1392)
++|+||||||+... ..+.+.+.++|...+++|+.|++++.+.+.+.+. . .++||++||.++..|.++ ...|++
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~ 159 (248)
T PRK06947 80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAG 159 (248)
T ss_pred CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHh
Confidence 99999999998643 5688999999999999999999999765543321 1 368999999999988875 578999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
+|++++.|++..+.+ |++..++.+|.+..
T Consensus 160 sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t 192 (248)
T PRK06947 160 SKGAVDTLTLGLAKELGPHGVRVNAVRPGLIET 192 (248)
T ss_pred hHHHHHHHHHHHHHHhhhhCcEEEEEeccCccc
Confidence 999999999887665 68888888887643
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.9e-17 Score=183.29 Aligned_cols=177 Identities=19% Similarity=0.177 Sum_probs=150.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
+++++|||||+||||.++|++|+++|++ |++++|+.. ......+.++..+.++.++.+|+++.++++++++.+ +.
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~-v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 77 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAK-VAVFDLNRE---AAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA 77 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEecCCHH---HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999996 888888742 233344455556778899999999999999999988 56
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|++||+||......+.+.+.++|+..++.|+.+++++.+++.+.+. ..++||++||.++..+.++...|+++|+
T Consensus 78 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~ 157 (250)
T TIGR03206 78 LGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKG 157 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHH
Confidence 89999999999988778888999999999999999999999888765442 3478999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++.+++..+.+ |++..++..|.+
T Consensus 158 a~~~~~~~la~~~~~~~i~v~~v~pg~~ 185 (250)
T TIGR03206 158 GLVAFSKTMAREHARHGITVNVVCPGPT 185 (250)
T ss_pred HHHHHHHHHHHHHhHhCcEEEEEecCcc
Confidence 998888876655 677777777655
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.5e-17 Score=184.93 Aligned_cols=176 Identities=21% Similarity=0.209 Sum_probs=148.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+|+||+++|++|+++|++ |++++|+... ......+++..+.++..+.||++++++++++++++ +.
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~-v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAK-VVIADLNDEA---AAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET 78 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCHHH---HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999997 7888887432 23344556667888999999999999999999998 56
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|+||||||......+.+.+.++|...++.++.|++++.+.+.+.+ ...++||++||.++..|.++++.|+++|+
T Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~ 158 (258)
T PRK12429 79 FGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKH 158 (258)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHH
Confidence 8899999999999888889999999999999999999999988776544 24579999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGA 959 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~ 959 (1392)
+++.+++..+.+ |....++..|.
T Consensus 159 a~~~~~~~l~~~~~~~~i~v~~~~pg~ 185 (258)
T PRK12429 159 GLIGLTKVVALEGATHGVTVNAICPGY 185 (258)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEecCC
Confidence 999999987665 33444444443
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-16 Score=181.81 Aligned_cols=175 Identities=16% Similarity=0.154 Sum_probs=144.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++|+||||+||||.++|++|+++|++ |++++|+... .....++++..+.++..+.+|+++.++++++++.+ +.
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~-vi~~~r~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGAS-VVVADINAEG---AERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA 80 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999997 8888887422 22333444455667788999999999999999998 66
Q ss_pred cCCccEEEECcccCC---CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHH
Q psy1119 859 LGPVDGIFNLAVVLK---DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGM 933 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~---d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaa 933 (1392)
++++|+||||||+.. ..++.+.+.++|++.++.|+.|++++.+++.+.+. +.+.||++||.++.. +.+.|++
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~ 157 (250)
T PRK07774 81 FGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGL 157 (250)
T ss_pred hCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHH
Confidence 889999999999864 45778889999999999999999999998876542 347999999987753 4678999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+|++++.+++..+.+ |++..++.+|.+.
T Consensus 158 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~ 189 (250)
T PRK07774 158 AKVGLNGLTQQLARELGGMNIRVNAIAPGPID 189 (250)
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEEecCccc
Confidence 999999999887655 6778888887764
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.1e-17 Score=183.16 Aligned_cols=177 Identities=22% Similarity=0.286 Sum_probs=148.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEe-cCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLT-SRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~-sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++++|||||+||||.++|++|+++|++ ++++ +|+.. ......+.+...+.++.++.+|++++++++++++.+ +
T Consensus 4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~-v~~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T PRK05565 4 MGKVAIVTGASGGIGRAIAELLAKEGAK-VVIAYDINEE---AAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVE 79 (247)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEcCCCHH---HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4679999999999999999999999998 5555 88742 223334445555778899999999999999999987 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
.++++|+|||+||......+.+.+.++|++.++.|+.|++++.+.+.+.+. ..++||++||.++..|.+++..|+++|
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK 159 (247)
T PRK05565 80 KFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASK 159 (247)
T ss_pred HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHH
Confidence 689999999999998777888999999999999999999999888765442 347899999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++++.+++..+.+ |++..++.+|.+
T Consensus 160 ~a~~~~~~~~~~~~~~~gi~~~~v~pg~v 188 (247)
T PRK05565 160 GAVNAFTKALAKELAPSGIRVNAVAPGAI 188 (247)
T ss_pred HHHHHHHHHHHHHHHHcCeEEEEEEECCc
Confidence 9988887766544 788888888765
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.6e-17 Score=183.90 Aligned_cols=181 Identities=20% Similarity=0.212 Sum_probs=147.3
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCC-ceEEEEeccCC--CHHHHHHHHH
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYD-VQVLISTDDIT--TEAGVVNLLT 854 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G-~~v~~~~~Dv~--~~~~v~~l~~ 854 (1392)
..++++++||||+||||.++|++|+++|++ |++++|+... .....++++..+ .++.++.+|++ +.++++++++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~-Vi~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 84 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGAT-VILLGRTEEK---LEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLAD 84 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCc-EEEEeCCHHH---HHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHH
Confidence 347899999999999999999999999995 8888988532 233344444433 45667777775 8899999999
Q ss_pred HH-hhcCCccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChh
Q psy1119 855 EA-NKLGPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTN 930 (1392)
Q Consensus 855 ~~-~~~g~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~ 930 (1392)
.+ +.++++|+||||||.... .++.+.+.+.|++.+++|+.|++++.+++.+.+ ...++||++||.++..+.+++..
T Consensus 85 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~ 164 (247)
T PRK08945 85 TIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGA 164 (247)
T ss_pred HHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcc
Confidence 88 568999999999998644 567889999999999999999999998886544 24579999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 931 YGMANSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
|+++|++++.|++..+.+ |.+..++++|.+..
T Consensus 165 Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t 200 (247)
T PRK08945 165 YAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRT 200 (247)
T ss_pred cHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccC
Confidence 999999999988865443 56677888887643
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.5e-17 Score=176.25 Aligned_cols=153 Identities=22% Similarity=0.215 Sum_probs=133.0
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
+++||||+||||+++|+.|+++ + +|++++|+.. .++||+++.+++++++++ +++|
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~--------------------~~~~D~~~~~~~~~~~~~---~~~i 56 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-H-EVITAGRSSG--------------------DVQVDITDPASIRALFEK---VGKV 56 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCC--------------------ceEecCCChHHHHHHHHh---cCCC
Confidence 6899999999999999999999 5 5888888741 268999999999998865 5789
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHHHH
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERIC 942 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~la 942 (1392)
|+||||||+....++.+++.++|++.+++|+.|++++.+++.+.+.+.+.||++||+++..+.++++.|+++|+++++|+
T Consensus 57 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~ 136 (199)
T PRK07578 57 DAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFV 136 (199)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHHHHHHH
Confidence 99999999988888999999999999999999999999988776666789999999999999999999999999999999
Q ss_pred HHHHHcC---CCeEEEEcccc
Q psy1119 943 EARRAEG---LPGLAVEWGAV 960 (1392)
Q Consensus 943 ~~r~~~G---lp~~ai~~g~~ 960 (1392)
+..+.+. ....+|..|.+
T Consensus 137 ~~la~e~~~gi~v~~i~Pg~v 157 (199)
T PRK07578 137 KAAALELPRGIRINVVSPTVL 157 (199)
T ss_pred HHHHHHccCCeEEEEEcCCcc
Confidence 9988864 33445544433
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.8e-17 Score=182.20 Aligned_cols=178 Identities=22% Similarity=0.345 Sum_probs=146.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++++||||+||||+++|++|+++|++ |++++|+... .....++++..|.++..+.+|+++.++++++++.+ +.
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~-vi~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAK-LALIDLNQEK---LEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED 79 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 7888887422 23344455556788899999999999999999997 55
Q ss_pred cCCccEEEECcccCCCccc---------cCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-C--CCCeEEEecccccccCCC
Q psy1119 859 LGPVDGIFNLAVVLKDALF---------ENQTPEDFNASLGPKANATKYFDKYSRTMC-P--TLGQFVVFSSVSCGRGNA 926 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~---------~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~--~l~~fV~~SS~s~~~G~~ 926 (1392)
++++|+||||||...+..+ .+.+.++|..+++.|+.|++++.+.+.+.+ . ..+.||++||. +..|.+
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~-~~~~~~ 158 (253)
T PRK08217 80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSI-ARAGNM 158 (253)
T ss_pred cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccc-cccCCC
Confidence 7899999999998665432 778999999999999999999987664433 1 23678888886 457889
Q ss_pred CChhHHHHHHHHHHHHHHHHH----cCCCeEEEEccccCc
Q psy1119 927 GQTNYGMANSIMERICEARRA----EGLPGLAVEWGAVGE 962 (1392)
Q Consensus 927 gq~~Yaaana~ld~la~~r~~----~Glp~~ai~~g~~~~ 962 (1392)
+.+.|+++|++++++++..+. .|++..++.+|.+..
T Consensus 159 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t 198 (253)
T PRK08217 159 GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIET 198 (253)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcC
Confidence 999999999999999887765 478889999988743
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.5e-17 Score=186.90 Aligned_cols=172 Identities=18% Similarity=0.158 Sum_probs=145.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||+++|+.|+++|++ |++++|+... ++.+...+ +.++.||++|.++++++++++ +.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~-V~~~~r~~~~-------l~~~~~~~--~~~~~~Dv~~~~~~~~~~~~~~~~ 71 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYT-VYGAARRVDK-------MEDLASLG--VHPLSLDVTDEASIKAAVDTIIAE 71 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHH-------HHHHHhCC--CeEEEeeCCCHHHHHHHHHHHHHh
Confidence 3579999999999999999999999997 7888887421 12222334 667889999999999999998 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|+||||||+...+++.+.+.++|+..+++|+.|+.++.+.+.+.+. ..+.||++||.++..+.++.+.|+++|+
T Consensus 72 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa 151 (273)
T PRK06182 72 EGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKF 151 (273)
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHH
Confidence 89999999999998888999999999999999999999998887766543 3478999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |++..++..|.+.
T Consensus 152 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~ 180 (273)
T PRK06182 152 ALEGFSDALRLEVAPFGIDVVVIEPGGIK 180 (273)
T ss_pred HHHHHHHHHHHHhcccCCEEEEEecCCcc
Confidence 999999877644 6777788777663
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.3e-16 Score=178.91 Aligned_cols=179 Identities=17% Similarity=0.201 Sum_probs=152.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+|+||.+++++|+++|++ |++++|+.. ......+.++..+.++.++.||++|.++++++++++ ..
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~-V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAE-VIVVDICGD---DAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVED 80 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999996 888888842 223344556666778899999999999999999988 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccc-cCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCG-RGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~-~G~~gq~~Yaaan 935 (1392)
++++|+|||+||.....++.+.+.++|...+++++.++.++.+++.+.+ ...+.||++||..+. .+.++.+.|+++|
T Consensus 81 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK 160 (251)
T PRK12826 81 FGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASK 160 (251)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHH
Confidence 8999999999999888888899999999999999999999988875433 235789999999988 7889999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
++++.+++..+.+ |++...+..|.+-.
T Consensus 161 ~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~ 191 (251)
T PRK12826 161 AGLVGFTRALALELAARNITVNSVHPGGVDT 191 (251)
T ss_pred HHHHHHHHHHHHHHHHcCeEEEEEeeCCCCc
Confidence 9999998876554 88888888887744
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-16 Score=204.47 Aligned_cols=244 Identities=20% Similarity=0.183 Sum_probs=183.6
Q ss_pred cccCCCcEEEEEechh-hhhhCHHHHHHHHHHHHHHHHcCCCCCcce-eeecccc--HHHHHHHHHcCCccceEEEEecC
Q psy1119 681 EVFMRETSFHGVMLDN-FFFAEQEWKMSLQKALQKAIDAGAVQPLVR-TIFPEDK--VEEAFRYMAAGKHIGKVIIKIRD 756 (1392)
Q Consensus 681 ~~~~k~~s~~g~~~~~-~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~-~vf~l~e--v~eA~~~l~~g~~~GKvVI~~~~ 756 (1392)
-.+..++.+.++.... .....++......+.+.....-|.+.+++. ..|+++- +++|-
T Consensus 349 ~~l~~g~g~~~~g~~~~~a~~~~d~~~~~~~~~~~a~~~~~~~~l~~~~~f~i~~~~~e~a~------------------ 410 (681)
T PRK08324 349 VVLIPGLGMFSFGKDKKTARVAADIYENAINVMRGAEAVGRYEPLSEQEAFDIEYWSLEQAK------------------ 410 (681)
T ss_pred EEEECCCceEEeCCCHHHhhhhHHHHHHHHHHHhhhhhcCCccCCChhhhcceeeehhhhhh------------------
Confidence 4456788888887654 234446666677777777767677777642 2222211 11110
Q ss_pred CCCccccCCcccccccCCccccCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceE
Q psy1119 757 EEPTKICTPKVKQLLAVPRYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQV 836 (1392)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v 836 (1392)
. ...+.....++++++||||+||||+++|++|+++|++ |++++|+... .....+.+... ..+
T Consensus 411 ---l----------~~~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~-Vvl~~r~~~~---~~~~~~~l~~~-~~v 472 (681)
T PRK08324 411 ---L----------QRMPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGAC-VVLADLDEEA---AEAAAAELGGP-DRA 472 (681)
T ss_pred ---h----------hcCCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCE-EEEEeCCHHH---HHHHHHHHhcc-CcE
Confidence 0 0001111236789999999999999999999999995 8999998532 22223333333 468
Q ss_pred EEEeccCCCHHHHHHHHHHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC---CCe
Q psy1119 837 LISTDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT---LGQ 912 (1392)
Q Consensus 837 ~~~~~Dv~~~~~v~~l~~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~---l~~ 912 (1392)
..+.||+++.++++++++++ +.+|++|+||||||+....++.+.+.++|+..+++|+.|++++.+++.+.+.+ .++
T Consensus 473 ~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~ 552 (681)
T PRK08324 473 LGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGS 552 (681)
T ss_pred EEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcE
Confidence 88999999999999999987 67899999999999999999999999999999999999999998877654432 379
Q ss_pred EEEecccccccCCCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 913 FVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 913 fV~~SS~s~~~G~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
||++||.++..+.++++.|+++|++++.+++..+.+ |++..+|+.|.+
T Consensus 553 iV~vsS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v 604 (681)
T PRK08324 553 IVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAV 604 (681)
T ss_pred EEEECCccccCCCCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCcee
Confidence 999999999999999999999999999999987765 456677777776
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.8e-17 Score=185.84 Aligned_cols=167 Identities=20% Similarity=0.201 Sum_probs=136.3
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
++++||||+ ||||+++|++|+ +|++ |++++|+.. ..+...++++..|.++.++.||++|.++++++++.+++++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~-Vv~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g 75 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKK-VLLADYNEE---NLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLG 75 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCE-EEEEeCCHH---HHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcC
Confidence 578999998 799999999996 8986 888888742 2233445556668889999999999999999999886789
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC---------------
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN--------------- 925 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~--------------- 925 (1392)
+||+||||||+.. +.++|++.++.|+.|++++.+++.+.+...+.+|++||.++..+.
T Consensus 76 ~id~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~ 148 (275)
T PRK06940 76 PVTGLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPT 148 (275)
T ss_pred CCCEEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccc
Confidence 9999999999752 246799999999999999999887766555788999999887653
Q ss_pred ---------------CCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 926 ---------------AGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 926 ---------------~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++..|+++|+++..+++..+.+ |..+.+|..|.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v 202 (275)
T PRK06940 149 EELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGII 202 (275)
T ss_pred ccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcC
Confidence 35789999999999999987664 455667777655
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-16 Score=180.20 Aligned_cols=174 Identities=24% Similarity=0.310 Sum_probs=145.9
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcCCc
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLGPV 862 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g~I 862 (1392)
+|||||+|+||..+|++|+++|++ +++++|+.. +......+.++..|.++..+.||+++.++++++++.+ +.++++
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~-v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAK-VIITYRSSE--EGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPI 77 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCch--hHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 589999999999999999999997 777777642 2223344556677888999999999999999999997 668999
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHHHHHH
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANSIMER 940 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~ 940 (1392)
|+|||+||...+.++.+.+.++|+..++.++.+++++.+.+.+.+ ...++||++||.++..|.++++.|+++|++++.
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~ 157 (239)
T TIGR01830 78 DILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIG 157 (239)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHH
Confidence 999999999888888888999999999999999999988876543 245799999999999999999999999998888
Q ss_pred HHHHHHH----cCCCeEEEEcccc
Q psy1119 941 ICEARRA----EGLPGLAVEWGAV 960 (1392)
Q Consensus 941 la~~r~~----~Glp~~ai~~g~~ 960 (1392)
+++..+. .|++...+..|.+
T Consensus 158 ~~~~l~~~~~~~g~~~~~i~pg~~ 181 (239)
T TIGR01830 158 FTKSLAKELASRNITVNAVAPGFI 181 (239)
T ss_pred HHHHHHHHHhhcCeEEEEEEECCC
Confidence 8776544 4777777776654
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.1e-17 Score=191.41 Aligned_cols=178 Identities=13% Similarity=0.097 Sum_probs=132.8
Q ss_pred CCCeEEEEcCc--chHHHHHHHHHHHhCCceEEEecCCC--------cccHHHHHHHHHHhcCCc-----eEEEEeccCC
Q psy1119 780 SNKSYIICGGL--GGFGLELADWLVLRGARKLVLTSRSG--------VKNGYQALRIKIWKSYDV-----QVLISTDDIT 844 (1392)
Q Consensus 780 ~~~~ylItGG~--gGiG~~lA~~La~~GAr~lvl~sRs~--------~~~~~~~~~~~~l~~~G~-----~v~~~~~Dv~ 844 (1392)
.+|++||||++ +|||+++|+.|+++||+ |++..|.+ ...+... .......|. ++..+.+|++
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~-Vvv~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~d~~ 83 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGAT-ILVGTWVPIYKIFSQSLELGKFD--ASRKLSNGSLLTFAKIYPMDASFD 83 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCE-EEEEeccchhhhhhhhccccccc--ccccccccchhhhhhHHHhhhhcC
Confidence 68999999996 99999999999999998 66654321 0000000 000001111 1111223333
Q ss_pred CH------------------HHHHHHHHHH-hhcCCccEEEECcccCC--CccccCCCHHHHHHHHhhHhHHHHHHHHHH
Q psy1119 845 TE------------------AGVVNLLTEA-NKLGPVDGIFNLAVVLK--DALFENQTPEDFNASLGPKANATKYFDKYS 903 (1392)
Q Consensus 845 ~~------------------~~v~~l~~~~-~~~g~I~gvi~~Agv~~--d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~ 903 (1392)
+. ++++++++++ +++|+||++|||||+.. ..++.+++.++|+++++.|+.|.+++.+++
T Consensus 84 ~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~ 163 (299)
T PRK06300 84 TPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHF 163 (299)
T ss_pred CCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 33 3589999988 67999999999999754 478999999999999999999999999999
Q ss_pred hhhCCCCCeEEEecccccccCCCCCh-hHHHHHHHHHHHHHHHHHcCC-----CeEEEEcccc
Q psy1119 904 RTMCPTLGQFVVFSSVSCGRGNAGQT-NYGMANSIMERICEARRAEGL-----PGLAVEWGAV 960 (1392)
Q Consensus 904 ~~~~~~l~~fV~~SS~s~~~G~~gq~-~Yaaana~ld~la~~r~~~Gl-----p~~ai~~g~~ 960 (1392)
.+++.+.+.+|++||+++..+.++.. .|+++|+++.+|++..+.+.. .+.+|..|.+
T Consensus 164 ~p~m~~~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v 226 (299)
T PRK06300 164 GPIMNPGGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPL 226 (299)
T ss_pred HHHhhcCCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCc
Confidence 88776678999999999999999875 899999999999999887643 3445555544
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-16 Score=177.54 Aligned_cols=180 Identities=18% Similarity=0.224 Sum_probs=150.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
+++++|||||+|+||.++|++|+++|++ +++..|+.. .......+.++..+.++.++.||++++++++++++++ +.
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~-v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGAD-VVVHYRSDE--EAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCCH--HHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH
Confidence 4579999999999999999999999997 555555532 2223334445556778889999999999999999987 56
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|+|||+||......+.+++.++|...+++|+.+++++.+.+.+.+. ..++||++||.++..+.++...|+++|+
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~ 161 (249)
T PRK12825 82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKA 161 (249)
T ss_pred cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHH
Confidence 79999999999988888899999999999999999999999988755432 3579999999999999999999999999
Q ss_pred HHHHHHHHHHH----cCCCeEEEEccccCc
Q psy1119 937 IMERICEARRA----EGLPGLAVEWGAVGE 962 (1392)
Q Consensus 937 ~ld~la~~r~~----~Glp~~ai~~g~~~~ 962 (1392)
+++++++..+. .|++...+..|.+-+
T Consensus 162 ~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~ 191 (249)
T PRK12825 162 GLVGLTKALARELAEYGITVNMVAPGDIDT 191 (249)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEEECCccC
Confidence 99999886655 478888888877644
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=182.07 Aligned_cols=179 Identities=19% Similarity=0.181 Sum_probs=150.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+++++||||+||||+++|+.|+++|++ |++++|+.. ..+.....++..+.++.++.+|+++.++++++++++ +
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~-Vi~~~r~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAK-VVLASRRVE---RLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET 82 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45799999999999999999999999996 888888742 223334445555667889999999999999999998 5
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC----------CCCeEEEecccccccCCCC
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP----------TLGQFVVFSSVSCGRGNAG 927 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~----------~l~~fV~~SS~s~~~G~~g 927 (1392)
.++++|+||||||+.....+.+.+.++|+.+++.|+.|++++.+++.+.+. ..+.||++||..+..+.++
T Consensus 83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~ 162 (258)
T PRK06949 83 EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQ 162 (258)
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCC
Confidence 689999999999998888888999999999999999999999887754321 1368999999999988899
Q ss_pred ChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 928 QTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 928 q~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
...|+++|++++++++..+.+ |+++.++..|.+.
T Consensus 163 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~ 200 (258)
T PRK06949 163 IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYID 200 (258)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCc
Confidence 999999999999999887654 7778888887763
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.8e-17 Score=184.14 Aligned_cols=169 Identities=22% Similarity=0.238 Sum_probs=142.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
+++++|||||+||||.++|+.|+++|++ |++++|+... ..+.++.+++||++|+++++++++++ ++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~r~~~~------------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGAR-VVTTARSRPD------------DLPEGVEFVAADLTTAEGCAAVARAVLER 74 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCE-EEEEeCChhh------------hcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 8888887421 11335778999999999999999998 67
Q ss_pred cCCccEEEECcccCC--CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCC-CChhHHH
Q psy1119 859 LGPVDGIFNLAVVLK--DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNA-GQTNYGM 933 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~--d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~-gq~~Yaa 933 (1392)
++++|+||||||... ...+.+.+.++|++.++.|+.|++++.+++.+.+. ..+.||++||+++..+.+ +...|++
T Consensus 75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~ 154 (260)
T PRK06523 75 LGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAA 154 (260)
T ss_pred cCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHH
Confidence 899999999999753 46688899999999999999999999888766543 347899999999988866 8999999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+|+++++|++..+.+ |....+|..|.+.
T Consensus 155 sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~ 186 (260)
T PRK06523 155 AKAALSTYSKSLSKEVAPKGVRVNTVSPGWIE 186 (260)
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence 999999999988765 6667777777653
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=181.72 Aligned_cols=181 Identities=17% Similarity=0.129 Sum_probs=141.5
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCc-eEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDV-QVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~-~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
..++++||||+||||+++|++|+++|.-+|++++|+... ..+...++++..|. ++.+++||++|.++++++++++.+
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~--~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDP--RRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcch--hHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 457899999999999999999999963358888998542 12333445555453 788999999999999999998855
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|++|||||...+..-...+.+++.+.+++|+.|++++.+.+.+.+. +.+.||++||.++..+.++.+.|+++|+
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKa 164 (253)
T PRK07904 85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKA 164 (253)
T ss_pred cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHH
Confidence 68999999999986542211123455667899999999998776655443 3489999999999888899999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
++++|++..+.+ |+.+.++..|.+..
T Consensus 165 a~~~~~~~l~~el~~~~i~v~~v~Pg~v~t 194 (253)
T PRK07904 165 GLDGFYLGLGEALREYGVRVLVVRPGQVRT 194 (253)
T ss_pred HHHHHHHHHHHHHhhcCCEEEEEeeCceec
Confidence 999998876554 77788888877643
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-16 Score=181.46 Aligned_cols=174 Identities=17% Similarity=0.158 Sum_probs=142.5
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC-C-ceEEEEeccCCCHHHHHHHHHHH-hhcC
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY-D-VQVLISTDDITTEAGVVNLLTEA-NKLG 860 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~-G-~~v~~~~~Dv~~~~~v~~l~~~~-~~~g 860 (1392)
++||||+||||.++|++|+++|++ |++++|+.. +......+.+... + ..+..+.||+++.++++++++++ +.++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~-v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAK-VFLTDINDA--AGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG 78 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCE-EEEEeCCcc--hHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 799999999999999999999996 888888732 1222223333332 2 34567889999999999999998 6689
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
++|+||||||......+.+.+.++|.+++++|+.+.+.+.+.+.+.+. ..++||++||.++..+.+++..|+++|+++
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~ 158 (251)
T PRK07069 79 GLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAV 158 (251)
T ss_pred CccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHH
Confidence 999999999998888899999999999999999998888777655543 347999999999999999999999999999
Q ss_pred HHHHHHHHHc------CCCeEEEEcccc
Q psy1119 939 ERICEARRAE------GLPGLAVEWGAV 960 (1392)
Q Consensus 939 d~la~~r~~~------Glp~~ai~~g~~ 960 (1392)
++|++..+.+ +....+|..|.+
T Consensus 159 ~~~~~~la~e~~~~~~~i~v~~v~pg~v 186 (251)
T PRK07069 159 ASLTKSIALDCARRGLDVRCNSIHPTFI 186 (251)
T ss_pred HHHHHHHHHHhcccCCcEEEEEEeeccc
Confidence 9999987665 245567776654
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.6e-16 Score=182.46 Aligned_cols=176 Identities=16% Similarity=0.128 Sum_probs=136.9
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-CCceEEEEeccCCCHHHH----HHHHHHH
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-YDVQVLISTDDITTEAGV----VNLLTEA 856 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-~G~~v~~~~~Dv~~~~~v----~~l~~~~ 856 (1392)
.+++||||++|||+++|+.|+++|++ |+++.|+.. +......+.+.. .+.++.++.||++|.+++ +++++.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~-V~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~ 78 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYR-VVLHYHRSA--AAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDAC 78 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCe-EEEEcCCcH--HHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHH
Confidence 58999999999999999999999997 666555421 222233444432 356777899999999866 4555555
Q ss_pred -hhcCCccEEEECcccCCCccccCCCH-----------HHHHHHHhhHhHHHHHHHHHHhhhCCC--------CCeEEEe
Q psy1119 857 -NKLGPVDGIFNLAVVLKDALFENQTP-----------EDFNASLGPKANATKYFDKYSRTMCPT--------LGQFVVF 916 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d~~~~~~t~-----------e~~~~~~~~kv~g~~~L~~~~~~~~~~--------l~~fV~~ 916 (1392)
+.++++|+||||||+....++.+.+. ++|.+.++.|+.+++++.+++.+.+.. .+.+|++
T Consensus 79 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~ 158 (267)
T TIGR02685 79 FRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNL 158 (267)
T ss_pred HHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEe
Confidence 56899999999999876555555444 359999999999999999887654421 2468999
Q ss_pred cccccccCCCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 917 SSVSCGRGNAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 917 SS~s~~~G~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
||..+..+.++.+.|+++|+++++|++..+.+ |+.+.+|..|.+
T Consensus 159 ~s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~ 206 (267)
T TIGR02685 159 CDAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLS 206 (267)
T ss_pred hhhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCc
Confidence 99999888999999999999999999987776 677888888765
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=181.93 Aligned_cols=174 Identities=18% Similarity=0.143 Sum_probs=137.5
Q ss_pred eEEEEcCcchHHHHHHHHHHH----hCCceEEEecCCCcccHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 783 SYIICGGLGGFGLELADWLVL----RGARKLVLTSRSGVKNGYQALRIKIWKS--YDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~----~GAr~lvl~sRs~~~~~~~~~~~~~l~~--~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
+++||||++|||+++|+.|++ +|++ |++++|+... .....++++. .+.++.++.||+++.++++++++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~-V~~~~r~~~~---~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~ 77 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSV-LVLSARNDEA---LRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKAL 77 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcE-EEEEEcCHHH---HHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHH
Confidence 689999999999999999997 6886 8888998532 2333445544 3668889999999999999999988
Q ss_pred -hhcCCc----cEEEECcccCCCc--cccCC-CHHHHHHHHhhHhHHHHHHHHHHhhhCCC----CCeEEEecccccccC
Q psy1119 857 -NKLGPV----DGIFNLAVVLKDA--LFENQ-TPEDFNASLGPKANATKYFDKYSRTMCPT----LGQFVVFSSVSCGRG 924 (1392)
Q Consensus 857 -~~~g~I----~gvi~~Agv~~d~--~~~~~-t~e~~~~~~~~kv~g~~~L~~~~~~~~~~----l~~fV~~SS~s~~~G 924 (1392)
+.++++ ++||||||+.... .+.++ +.++|++.+++|+.|++++.+.+.+.+.. .+.||++||+++..+
T Consensus 78 ~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~ 157 (256)
T TIGR01500 78 RELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP 157 (256)
T ss_pred HhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC
Confidence 445553 5999999986442 34444 57899999999999999998887665432 258999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 925 NAGQTNYGMANSIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 925 ~~gq~~Yaaana~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
.++.+.|+++|+++++|++..+.+. ....++..|.+
T Consensus 158 ~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v 197 (256)
T TIGR01500 158 FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVL 197 (256)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcc
Confidence 9999999999999999999987764 33444444443
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-16 Score=180.94 Aligned_cols=169 Identities=19% Similarity=0.228 Sum_probs=146.0
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.+++++|||||+||||+++|++|+++|++ +++++|+. ++..+.++..++||+++.++++++++++ +
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~~-v~~~~~~~------------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAK-VIGFDQAF------------LTQEDYPFATFVLDVSDAAAVAQVCQRLLA 72 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEecch------------hhhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999997 77778763 1233667888999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
.++++|.||||||+....++.+.+.++|...++.++.+++++.+++.+.+ ...+.||++||.++..+.++.+.|+++|
T Consensus 73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK 152 (252)
T PRK08220 73 ETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASK 152 (252)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHH
Confidence 68999999999999888889999999999999999999999998876544 2447899999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++++|++..+.+ |+...++..|.+
T Consensus 153 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v 181 (252)
T PRK08220 153 AALTSLAKCVGLELAPYGVRCNVVSPGST 181 (252)
T ss_pred HHHHHHHHHHHHHhhHhCeEEEEEecCcC
Confidence 9999999988765 566666666654
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.7e-16 Score=183.09 Aligned_cols=177 Identities=20% Similarity=0.244 Sum_probs=144.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC--CceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY--DVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~--G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
++++||||||+||||.++|++|+++|++ |++++|+.... ....+.+... +.++.++.||++++++++++++++
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~-V~~~~r~~~~~---~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 81 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAA-VMIVGRNPDKL---AAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAAT 81 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEeCCHHHH---HHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 4689999999999999999999999996 88888874322 2223333332 357888999999999999999998
Q ss_pred hhcCCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHH
Q psy1119 857 NKLGPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGM 933 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaa 933 (1392)
++++++|+||||||... ..++.+++.++|...++.|+.|++++.+++.+.+ ...+.||++||.++..+.++++.|++
T Consensus 82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~ 161 (276)
T PRK05875 82 AWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGV 161 (276)
T ss_pred HHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHH
Confidence 67899999999999754 3678889999999999999999999988765443 23469999999999988899999999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+|++++.+++..+.+ |+.+.+|..|.+
T Consensus 162 sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v 192 (276)
T PRK05875 162 TKSAVDHLMKLAADELGPSWVRVNSIRPGLI 192 (276)
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEecCcc
Confidence 999999999987655 455666766654
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.1e-16 Score=165.05 Aligned_cols=172 Identities=15% Similarity=0.149 Sum_probs=142.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+.|+|||||++|||+++|+.|.+.|-+ |++++|+.. .+++..+.--.++...|||.|.++.+++++.+ ++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~-VIi~gR~e~-------~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~ 75 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNT-VIICGRNEE-------RLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKE 75 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCE-EEEecCcHH-------HHHHHHhcCcchheeeecccchhhHHHHHHHHHhh
Confidence 3579999999999999999999999997 899999842 23333333456788899999999999999998 67
Q ss_pred cCCccEEEECcccCCCcccc--CCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFE--NQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~--~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
++.++.+|||||+.++-.|. +-+.++..+-++.|+.++.+|..++.++. ++-..+|++||--++.+......|||+
T Consensus 76 ~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaT 155 (245)
T COG3967 76 YPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCAT 155 (245)
T ss_pred CCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhh
Confidence 99999999999999887665 44557778899999999999999887654 245899999999999999999999999
Q ss_pred HHHHHHHHHHHHHc--CCCeEEEEccc
Q psy1119 935 NSIMERICEARRAE--GLPGLAVEWGA 959 (1392)
Q Consensus 935 na~ld~la~~r~~~--Glp~~ai~~g~ 959 (1392)
|+++.+++..+|.+ ..-.-.|+..+
T Consensus 156 KAaiHsyt~aLR~Qlk~t~veVIE~~P 182 (245)
T COG3967 156 KAAIHSYTLALREQLKDTSVEVIELAP 182 (245)
T ss_pred HHHHHHHHHHHHHHhhhcceEEEEecC
Confidence 99999999998876 22334455444
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.5e-16 Score=179.44 Aligned_cols=177 Identities=15% Similarity=0.164 Sum_probs=143.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC-CceEEEEeccCCC--HHHHHHHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY-DVQVLISTDDITT--EAGVVNLLTEA 856 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~-G~~v~~~~~Dv~~--~~~v~~l~~~~ 856 (1392)
++++++||||+||||+++|++|+++|++ |++++|+... .+...+++... +.++..+++|+++ .+++.++++++
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~-V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i 80 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGAT-VILVARHQKK---LEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATI 80 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCE-EEEEeCChHH---HHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHH
Confidence 4689999999999999999999999997 8888998532 22333444333 3467788999986 56888888887
Q ss_pred -hhc-CCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhH
Q psy1119 857 -NKL-GPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 857 -~~~-g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
..+ +++|+||||||... ..++.+.+.++|.+.+++|+.|++++.+++.+.+. ..+.||++||..+..+.++.+.|
T Consensus 81 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y 160 (239)
T PRK08703 81 AEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGF 160 (239)
T ss_pred HHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccch
Confidence 456 79999999999764 36789999999999999999999999988866543 24799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcC-----CCeEEEEcccc
Q psy1119 932 GMANSIMERICEARRAEG-----LPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~r~~~G-----lp~~ai~~g~~ 960 (1392)
+++|++++.|++..+.+. ..+.+|..|.+
T Consensus 161 ~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v 194 (239)
T PRK08703 161 GASKAALNYLCKVAADEWERFGNLRANVLVPGPI 194 (239)
T ss_pred HHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcc
Confidence 999999999999887763 44556656554
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.3e-16 Score=178.20 Aligned_cols=177 Identities=25% Similarity=0.287 Sum_probs=151.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
+++++|||||+|+||..+|++|+++|++ |++++|+..+ .......++..|.++.++.||+++++++.++++++ ..
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~-v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAK-VVIYDSNEEA---AEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA 79 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCChhH---HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 3579999999999999999999999998 8889998532 23344556667888999999999999999999987 56
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|+|||+||......+.+.+.++|...++.++.+++++.+++.+.+. ..++||++||.++..|..+...|+.+|+
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~ 159 (246)
T PRK05653 80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKA 159 (246)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHH
Confidence 89999999999988888888999999999999999999999888755432 3479999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++.+++....+ ++...++..|.+
T Consensus 160 ~~~~~~~~l~~~~~~~~i~~~~i~pg~~ 187 (246)
T PRK05653 160 GVIGFTKALALELASRGITVNAVAPGFI 187 (246)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEEeCCc
Confidence 999998876543 677777777765
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.7e-16 Score=200.05 Aligned_cols=174 Identities=17% Similarity=0.168 Sum_probs=147.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||++|||+++|+.|+++|++ |++++|+... ..... +..|.++..+++|++++++++++++.+ +.
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~-V~~~~r~~~~---~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQ-VVVADRNVER---ARERA---DSLGPDHHALAMDVSDEAQIREGFEQLHRE 76 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHH---HHhCCceeEEEeccCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999996 8888887422 22222 233667888999999999999999998 67
Q ss_pred cCCccEEEECcccCC--CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CC-CeEEEecccccccCCCCChhHHH
Q psy1119 859 LGPVDGIFNLAVVLK--DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TL-GQFVVFSSVSCGRGNAGQTNYGM 933 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~--d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l-~~fV~~SS~s~~~G~~gq~~Yaa 933 (1392)
+++||++|||||+.. ..++.+++.++|++.++.|+.|++++.+++.+++. +. +.||++||.++..+.++.+.|++
T Consensus 77 ~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~a 156 (520)
T PRK06484 77 FGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSA 156 (520)
T ss_pred hCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHH
Confidence 899999999999853 35688999999999999999999999988876652 22 49999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+|+++++|++..+.+ |..+.+|..|.+
T Consensus 157 sKaal~~l~~~la~e~~~~~i~v~~i~Pg~v 187 (520)
T PRK06484 157 SKAAVISLTRSLACEWAAKGIRVNAVLPGYV 187 (520)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEccCCc
Confidence 999999999988776 566777777765
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.5e-16 Score=185.11 Aligned_cols=183 Identities=17% Similarity=0.162 Sum_probs=143.0
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
+++++||||++|||+++|++|+++|+.+|++++|+... ..+..++++..+.++.++.||+++.++++++++++ +.+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~---~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLK---AEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG 79 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHH---HHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 57999999999999999999999993348888987432 23334455555667888999999999999999998 557
Q ss_pred CCccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC----CCeEEEecccccccC----------
Q psy1119 860 GPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT----LGQFVVFSSVSCGRG---------- 924 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~----l~~fV~~SS~s~~~G---------- 924 (1392)
++||++|||||+... ..+...+.++|+.++++|+.|++++.+++.+++.. .+.||++||+++..+
T Consensus 80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~ 159 (314)
T TIGR01289 80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKA 159 (314)
T ss_pred CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcc
Confidence 899999999998643 34457789999999999999999999888665532 369999999987432
Q ss_pred -----------------------CCCChhHHHHHHHHHHHHHHHHHc-----CCCeEEEEccccCccccc
Q psy1119 925 -----------------------NAGQTNYGMANSIMERICEARRAE-----GLPGLAVEWGAVGEVGLV 966 (1392)
Q Consensus 925 -----------------------~~gq~~Yaaana~ld~la~~r~~~-----Glp~~ai~~g~~~~~G~~ 966 (1392)
..+...|+++|+++..+++..+.+ |....+++.|.+-++++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~ 229 (314)
T TIGR01289 160 NLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLF 229 (314)
T ss_pred cccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCccc
Confidence 124567999999999888876543 555678888776444443
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.4e-16 Score=178.27 Aligned_cols=174 Identities=21% Similarity=0.148 Sum_probs=146.1
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHh-cCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK-SYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~-~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
++++||||+||||+++|++|+++|++ |++++|+.... ....+.++ ..+.++.++.||++++++++++++++..
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~-Vi~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-- 75 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGAR-LYLAARDVERL---ERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA-- 75 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCCHHHH---HHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh--
Confidence 68999999999999999999999997 88888885322 22233332 2356889999999999999999998743
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
.+|++|||||......+.+.+.++|.+.++.|+.|+.++.+++.+.+. ..+.||++||.++..+.++...|+++|+++
T Consensus 76 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 155 (243)
T PRK07102 76 LPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAAL 155 (243)
T ss_pred cCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHH
Confidence 579999999998888889999999999999999999999988866543 357999999999999999999999999999
Q ss_pred HHHHHHHHHc----CCCeEEEEccccC
Q psy1119 939 ERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 939 d~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++|++..+.+ |.++.++..|.+.
T Consensus 156 ~~~~~~l~~el~~~gi~v~~v~pg~v~ 182 (243)
T PRK07102 156 TAFLSGLRNRLFKSGVHVLTVKPGFVR 182 (243)
T ss_pred HHHHHHHHHHhhccCcEEEEEecCccc
Confidence 9999987544 7778888877663
|
|
| >KOG4169|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.8e-17 Score=171.44 Aligned_cols=168 Identities=20% Similarity=0.226 Sum_probs=142.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC--CceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY--DVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~--G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
.+|.+++|||.||||+++++.|.++|++++++..|-.. .+.+..|++. -.++.+++|||++..+++++++++
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-----~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~ 78 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-----PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKIL 78 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-----HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHH
Confidence 37899999999999999999999999998888877532 2334444443 478899999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-----CCCeEEEecccccccCCCCChhH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-----TLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-----~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
..||.||.+||+||++.| .+|++.+++|+.|..+-..+..+++. +.+-+|++||++|+-+.|-+..|
T Consensus 79 ~~fg~iDIlINgAGi~~d--------kd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY 150 (261)
T KOG4169|consen 79 ATFGTIDILINGAGILDD--------KDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVY 150 (261)
T ss_pred HHhCceEEEEcccccccc--------hhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhh
Confidence 889999999999999864 56999999999999998887766652 34899999999999999999999
Q ss_pred HHHHHHHHHHHHHH------HHcCCCeEEEEcccc
Q psy1119 932 GMANSIMERICEAR------RAEGLPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~r------~~~Glp~~ai~~g~~ 960 (1392)
+|+|+++-.|++.. ++.|....++..|..
T Consensus 151 ~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t 185 (261)
T KOG4169|consen 151 AASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFT 185 (261)
T ss_pred hhcccceeeeehhhhhhhhHhhcCEEEEEECCCcc
Confidence 99999999999874 345777777777764
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.5e-16 Score=176.10 Aligned_cols=177 Identities=23% Similarity=0.227 Sum_probs=148.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+|+||.++|++|+++|++ |++++|+... .....+.+... ..+..+.+|+++.++++++++.+ +.
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~-V~~~~r~~~~---~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYK-VAITARDQKE---LEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAA 79 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEeeCCHHH---HHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999997 8888887422 22333444433 56888999999999999999998 56
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-CCCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC-PTLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
++++|+|||+||......+.+.+.++|.+.+++|+.|++++.+++.+.+ ...++||++||.++..+..+...|+++|++
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a 159 (237)
T PRK07326 80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFG 159 (237)
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHHH
Confidence 8899999999999888888999999999999999999999988876543 245789999999998888899999999999
Q ss_pred HHHHHHHH----HHcCCCeEEEEccccC
Q psy1119 938 MERICEAR----RAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 938 ld~la~~r----~~~Glp~~ai~~g~~~ 961 (1392)
+..+++.. +..|++..++..|.+.
T Consensus 160 ~~~~~~~~~~~~~~~gi~v~~v~pg~~~ 187 (237)
T PRK07326 160 LVGFSEAAMLDLRQYGIKVSTIMPGSVA 187 (237)
T ss_pred HHHHHHHHHHHhcccCcEEEEEeecccc
Confidence 99988875 3458888888877653
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.2e-16 Score=178.60 Aligned_cols=172 Identities=17% Similarity=0.090 Sum_probs=142.7
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
++++|||||+||||++++++|+++|++ ++++.|+... .....+..+..+.++.++.+|++|.++++++++ +
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~-v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~ 72 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHN-VIAGVQIAPQ---VTALRAEAARRGLALRVEKLDLTDAIDRAQAAE-----W 72 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-----C
Confidence 468999999999999999999999997 7777887422 222333344556778889999999998877653 3
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
++|+||||||....+++.+.+.++|+..+.+|+.|++++.+.+.+.+ ...++||++||.++..+.++...|+++|+++
T Consensus 73 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~ 152 (257)
T PRK09291 73 DVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHAL 152 (257)
T ss_pred CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHH
Confidence 89999999999888899999999999999999999999988765433 2347999999999999999999999999999
Q ss_pred HHHHHHHHH----cCCCeEEEEccccC
Q psy1119 939 ERICEARRA----EGLPGLAVEWGAVG 961 (1392)
Q Consensus 939 d~la~~r~~----~Glp~~ai~~g~~~ 961 (1392)
+++++..+. .|++..++..|.+.
T Consensus 153 ~~~~~~l~~~~~~~gi~~~~v~pg~~~ 179 (257)
T PRK09291 153 EAIAEAMHAELKPFGIQVATVNPGPYL 179 (257)
T ss_pred HHHHHHHHHHHHhcCcEEEEEecCccc
Confidence 999987665 48888888887663
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.3e-16 Score=178.50 Aligned_cols=173 Identities=21% Similarity=0.200 Sum_probs=140.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++++||||+||||.++|++|+++|++ |++++|+... .+...+.+ +. .+++||++++++++++++++ +.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~-v~~~~r~~~~---~~~~~~~~---~~--~~~~~D~~~~~~~~~~~~~~~~~ 76 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGAT-VVVGDIDPEA---GKAAADEV---GG--LFVPTDVTDEDAVNALFDTAAET 76 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHH---HHHHHHHc---CC--cEEEeeCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 7778887421 22222222 22 46789999999999999998 56
Q ss_pred cCCccEEEECcccCC--CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCC-CChhHHH
Q psy1119 859 LGPVDGIFNLAVVLK--DALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNA-GQTNYGM 933 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~--d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~-gq~~Yaa 933 (1392)
+++||+||||||... ..++.+.+.+.|+..++.|+.|++++.+.+.+.+ ...++||++||.++..|.+ ++..|++
T Consensus 77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~ 156 (255)
T PRK06057 77 YGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTA 156 (255)
T ss_pred cCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHH
Confidence 789999999999763 3467788999999999999999999988775544 2347999999998888874 8899999
Q ss_pred HHHHHHHHHHHHHH----cCCCeEEEEccccC
Q psy1119 934 ANSIMERICEARRA----EGLPGLAVEWGAVG 961 (1392)
Q Consensus 934 ana~ld~la~~r~~----~Glp~~ai~~g~~~ 961 (1392)
+|++++.+++..+. .|....+|..|.+.
T Consensus 157 sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~ 188 (255)
T PRK06057 157 SKGGVLAMSRELGVQFARQGIRVNALCPGPVN 188 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcC
Confidence 99999999886543 47888888887764
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4e-16 Score=178.50 Aligned_cols=176 Identities=22% Similarity=0.289 Sum_probs=145.6
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++++++||||+||||+.+|++|+++|++ |++++|+... .+...+... +.++.++.+|++++++++.+++++ +
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~-V~~~~r~~~~---~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGAR-VHVCDVSEAA---LAATAARLP--GAKVTATVADVADPAQVERVFDTAVE 82 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHh--cCceEEEEccCCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999997 8888887421 222222222 226788999999999999999998 5
Q ss_pred hcCCccEEEECcccC-CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCC-CeEEEecccccccCCCCChhHHH
Q psy1119 858 KLGPVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTL-GQFVVFSSVSCGRGNAGQTNYGM 933 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~-~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l-~~fV~~SS~s~~~G~~gq~~Yaa 933 (1392)
.++++|+|||+||.. ....+.+.+.++|.+.++.++.|++++.+.+.+.+ ... ++||++||.++..|.+++..|++
T Consensus 83 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~ 162 (264)
T PRK12829 83 RFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAA 162 (264)
T ss_pred HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHH
Confidence 689999999999987 66678899999999999999999999988764432 122 78999999999999999999999
Q ss_pred HHHHHHHHHHHHHH----cCCCeEEEEcccc
Q psy1119 934 ANSIMERICEARRA----EGLPGLAVEWGAV 960 (1392)
Q Consensus 934 ana~ld~la~~r~~----~Glp~~ai~~g~~ 960 (1392)
+|++++.+++..+. .+++..++.+|.+
T Consensus 163 ~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v 193 (264)
T PRK12829 163 SKWAVVGLVKSLAIELGPLGIRVNAILPGIV 193 (264)
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEecCCc
Confidence 99999999887654 3788888888765
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.1e-16 Score=174.63 Aligned_cols=176 Identities=22% Similarity=0.293 Sum_probs=146.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++++||||+|+||+++|++|+++|++ |++++|+..+. ....+.+...+ +..+.+|++|.++++++++++ +.
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~-v~~~~r~~~~~---~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~ 79 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGAR-VALIGRGAAPL---SQTLPGVPADA--LRIGGIDLVDPQAARRAVDEVNRQ 79 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCe-EEEEeCChHhH---HHHHHHHhhcC--ceEEEeecCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 88888975322 22233344444 455679999999999999998 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|+|||+||......+.+.+.++|.+.+..|+.++.++.+++.+.+ ...++||++||+++..+.+++..|+++|+
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~ 159 (239)
T PRK12828 80 FGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKA 159 (239)
T ss_pred hCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHH
Confidence 8999999999998877788888999999999999999999988876543 24589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++.+++..+.+ |++...+..|.+-
T Consensus 160 a~~~~~~~~a~~~~~~~i~~~~i~pg~v~ 188 (239)
T PRK12828 160 GVARLTEALAAELLDRGITVNAVLPSIID 188 (239)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence 999988876543 6777777777654
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.5e-16 Score=177.31 Aligned_cols=178 Identities=17% Similarity=0.194 Sum_probs=139.3
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHh-cCC-ceEEEEeccCCCHHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK-SYD-VQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~-~~G-~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
..+++++||||+||||+++|++|+++|++ |++++|+... .+...+.+. ..+ ..+.++.||++|+++++++++.+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~-v~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGI-VIAADIDKEA---LNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKS 77 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEecChHH---HHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHH
Confidence 35789999999999999999999999997 7888887432 222333332 222 34566799999999999999998
Q ss_pred -hhcCCccEEEECcccCC---CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCC-----
Q psy1119 857 -NKLGPVDGIFNLAVVLK---DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGN----- 925 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~---d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~----- 925 (1392)
..++++|+|||||+... ...+.+.+.++|+..++.|+.+++++.+++.+.+. ..+.||++||+++..+.
T Consensus 78 ~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~ 157 (256)
T PRK09186 78 AEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIY 157 (256)
T ss_pred HHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhc
Confidence 66899999999998643 34788999999999999999999999888766542 34799999998876432
Q ss_pred -----CCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 926 -----AGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 926 -----~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
.....|+++|+++++|++..+.+ |+...++..|.+
T Consensus 158 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~ 201 (256)
T PRK09186 158 EGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGI 201 (256)
T ss_pred cccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccc
Confidence 12347999999999999877775 455666666644
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=4e-16 Score=175.75 Aligned_cols=168 Identities=20% Similarity=0.170 Sum_probs=142.5
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.+++++||||+||||.++|++|+++|+++|++++|+.... . . .+.++.++.+|+++.++++++++. +
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~---~----~---~~~~~~~~~~D~~~~~~~~~~~~~---~ 71 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESV---T----D---LGPRVVPLQLDVTDPASVAAAAEA---A 71 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhh---h----h---cCCceEEEEecCCCHHHHHHHHHh---c
Confidence 5689999999999999999999999995699999874221 1 1 356788899999999999887765 4
Q ss_pred CCccEEEECccc-CCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 860 GPVDGIFNLAVV-LKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 860 g~I~gvi~~Agv-~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+++|+|||+||+ .....+.+.+.++|.+.+++|+.+++++.+++.+.+ .+.++||++||..+..+.++...|+++|+
T Consensus 72 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~ 151 (238)
T PRK08264 72 SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKA 151 (238)
T ss_pred CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHH
Confidence 789999999999 667788999999999999999999999998876543 24578999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++++++..+.+ |++...+.+|.+
T Consensus 152 a~~~~~~~l~~~~~~~~i~~~~v~pg~v 179 (238)
T PRK08264 152 AAWSLTQALRAELAPQGTRVLGVHPGPI 179 (238)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeCCcc
Confidence 999999987665 677777777665
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.8e-16 Score=176.16 Aligned_cols=176 Identities=19% Similarity=0.201 Sum_probs=147.4
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
++++|||||+|+||+++|++|+++|++ |++++|+.. ..+...++++..+.++..+.||+++.++++++++.+ +.+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~-v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGAN-VVVNDLGEA---GAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF 76 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 368999999999999999999999996 888898742 233344455556778899999999999999999998 568
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+++|+|||+|++.......+.+.++|++.++.++.|++++.+++.+.+ .+.+.||++||.++..+.+++..|+++|++
T Consensus 77 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a 156 (255)
T TIGR01963 77 GGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHG 156 (255)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHH
Confidence 899999999998877777888999999999999999999988775543 245799999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++++++..+.+ |++...+..|.+
T Consensus 157 ~~~~~~~~~~~~~~~~i~v~~i~pg~v 183 (255)
T TIGR01963 157 LIGLTKVLALEVAAHGITVNAICPGYV 183 (255)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecCcc
Confidence 99999876554 667666665543
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.3e-15 Score=173.12 Aligned_cols=176 Identities=17% Similarity=0.192 Sum_probs=138.4
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ ++++.|+.. ...+..... .+.++.+++||++++++++++++++ +.
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~-vv~~~~~~~--~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGAR-VVVNYHQSE--DAAEALADE---LGDRAIALQADVTDREQVQAMFATATEH 77 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCe-EEEEcCCCH--HHHHHHHHH---hCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999998 554444321 112222222 2456888999999999999999997 56
Q ss_pred cCC-ccEEEECcccCC------CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCCh
Q psy1119 859 LGP-VDGIFNLAVVLK------DALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQT 929 (1392)
Q Consensus 859 ~g~-I~gvi~~Agv~~------d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~ 929 (1392)
+++ +|++|||||+.. ..++.+.+.++|.+.++.|+.|++++.+++.+.+ ...+.||++||..+..+..+..
T Consensus 78 ~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 157 (253)
T PRK08642 78 FGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYH 157 (253)
T ss_pred hCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCcc
Confidence 776 999999998732 3468899999999999999999999998876543 2347999999988777777788
Q ss_pred hHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 930 NYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
.|+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 158 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~ 193 (253)
T PRK08642 158 DYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLR 193 (253)
T ss_pred chHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccC
Confidence 9999999999999998766 4445566666553
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.8e-16 Score=177.76 Aligned_cols=170 Identities=15% Similarity=0.131 Sum_probs=140.5
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH-H-hhc
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE-A-NKL 859 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~-~-~~~ 859 (1392)
.++|||||+||||+++|++|+++|++ |++++|+... . . ....+.++.++++|+++.+++++++++ + +.+
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~-v~~~~r~~~~--~---~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 72 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIA-VLGVARSRHP--S---L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAF 72 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCE-EEEEecCcch--h---h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHh
Confidence 37999999999999999999999997 7778887432 1 1 223467888999999999999998876 3 333
Q ss_pred ---CCccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHH
Q psy1119 860 ---GPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGM 933 (1392)
Q Consensus 860 ---g~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaa 933 (1392)
+++|++|||||.... .++.+.+.++|+..+++|+.|+.++.+.+.+.+. ..++||++||+++..+.++++.|++
T Consensus 73 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~ 152 (243)
T PRK07023 73 VDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCA 152 (243)
T ss_pred ccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHH
Confidence 489999999998653 5788889999999999999999998887765443 3479999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc---CCCeEEEEcccc
Q psy1119 934 ANSIMERICEARRAE---GLPGLAVEWGAV 960 (1392)
Q Consensus 934 ana~ld~la~~r~~~---Glp~~ai~~g~~ 960 (1392)
+|++++++++..+.+ |....+|.+|.+
T Consensus 153 sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~ 182 (243)
T PRK07023 153 TKAALDHHARAVALDANRALRIVSLAPGVV 182 (243)
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEEecCCcc
Confidence 999999999987765 566677776665
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.6e-16 Score=200.56 Aligned_cols=178 Identities=21% Similarity=0.216 Sum_probs=147.1
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-CC-ceEEEEeccCCCHHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-YD-VQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-~G-~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+... .....+.+.. .+ .++..++||+++.++++++++++
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga~-Vvi~~r~~~~---~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i 487 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGAH-VVLADLNLEA---AEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADV 487 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCE-EEEEeCCHHH---HHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 35799999999999999999999999996 8888887432 2222233322 23 35778999999999999999998
Q ss_pred -hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccCCCCChhHH
Q psy1119 857 -NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
..+|++|+||||||+....++.+.+.++|+..+++|+.|.+++.+.+.+.+. ..+.||++||.++..+.+++..|+
T Consensus 488 ~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~ 567 (676)
T TIGR02632 488 ALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYS 567 (676)
T ss_pred HHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHH
Confidence 6799999999999998888899999999999999999999998766644432 236899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++|++++.+++..+.+ |..+.+|+.|.+
T Consensus 568 aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V 599 (676)
T TIGR02632 568 AAKAAEAHLARCLAAEGGTYGIRVNTVNPDAV 599 (676)
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEECCce
Confidence 9999999999988776 455667777655
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.2e-16 Score=202.15 Aligned_cols=178 Identities=19% Similarity=0.156 Sum_probs=150.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||+++|++|+++|++ |++++|+.. ..++..++++..|.++.+++||++|.++++++++++ +.
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 445 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGAT-VFLVARNGE---ALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAE 445 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHH---HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4789999999999999999999999996 888888742 233444555566778999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCC--HHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQT--PEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t--~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+|++|++|||||......+.+.+ .++|++++++|+.|++++.+++.+.+. ..++||++||+++..+.++++.|+++
T Consensus 446 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 525 (657)
T PRK07201 446 HGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVAS 525 (657)
T ss_pred cCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHH
Confidence 89999999999986555554433 589999999999999999888766553 34799999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++++|++..+.+ |+...+|..|.+.
T Consensus 526 K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~ 556 (657)
T PRK07201 526 KAALDAFSDVAASETLSDGITFTTIHMPLVR 556 (657)
T ss_pred HHHHHHHHHHHHHHHHhhCCcEEEEECCcCc
Confidence 99999999987765 6778888888774
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.6e-16 Score=173.62 Aligned_cols=166 Identities=23% Similarity=0.217 Sum_probs=138.0
Q ss_pred EEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCccE
Q psy1119 785 IICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVDG 864 (1392)
Q Consensus 785 lItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~g 864 (1392)
|||||+||||+++|++|+++|++ |++++|+.. ......+.++ .+.++.++.||+++.++++++++. +++||+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~-v~~~~r~~~---~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~---~~~id~ 72 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGAR-VTIASRSRD---RLAAAARALG-GGAPVRTAALDITDEAAVDAFFAE---AGPFDH 72 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHh---cCCCCE
Confidence 69999999999999999999997 888888742 2223333333 367788899999999999988875 479999
Q ss_pred EEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHHHHHH
Q psy1119 865 IFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEA 944 (1392)
Q Consensus 865 vi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~la~~ 944 (1392)
+||+||.....++.+.+.++|++.+++|+.+++++.++. .+.+.++||++||.++..+.++++.|+++|+++++|++.
T Consensus 73 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~--~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~ 150 (230)
T PRK07041 73 VVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAA--RIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARG 150 (230)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhh--hhcCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence 999999988888899999999999999999999998843 234568999999999999999999999999999999999
Q ss_pred HHHcCC--CeEEEEcccc
Q psy1119 945 RRAEGL--PGLAVEWGAV 960 (1392)
Q Consensus 945 r~~~Gl--p~~ai~~g~~ 960 (1392)
.+.+.. ...++..|.+
T Consensus 151 la~e~~~irv~~i~pg~~ 168 (230)
T PRK07041 151 LALELAPVRVNTVSPGLV 168 (230)
T ss_pred HHHHhhCceEEEEeeccc
Confidence 887643 3455555544
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.2e-16 Score=181.32 Aligned_cols=178 Identities=17% Similarity=0.152 Sum_probs=139.7
Q ss_pred EEEcCcchHHHHHHHHHHHhC-CceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcCCc
Q psy1119 785 IICGGLGGFGLELADWLVLRG-ARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLGPV 862 (1392)
Q Consensus 785 lItGG~gGiG~~lA~~La~~G-Ar~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g~I 862 (1392)
|||||++|||+++|+.|+++| ++ |++++|+.. ......++++..+.++.++.||+++.++++++++.+ +.+++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~-V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i 76 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWH-VVMACRDFL---KAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPL 76 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCE-EEEEeCCHH---HHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCC
Confidence 699999999999999999999 65 888888742 223344455444567888999999999999999998 557899
Q ss_pred cEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-C---CCeEEEecccccccC-------------
Q psy1119 863 DGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-T---LGQFVVFSSVSCGRG------------- 924 (1392)
Q Consensus 863 ~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~---l~~fV~~SS~s~~~G------------- 924 (1392)
|++|||||+... ..+.+++.++|+.++++|+.|++++.+++.+.+. . .+.||++||+++..+
T Consensus 77 D~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~ 156 (308)
T PLN00015 77 DVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLG 156 (308)
T ss_pred CEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchh
Confidence 999999998643 3677899999999999999999999988766542 2 369999999987432
Q ss_pred ----------------------CCCChhHHHHHHHHHHHHHHHHHc-----CCCeEEEEccccCccccc
Q psy1119 925 ----------------------NAGQTNYGMANSIMERICEARRAE-----GLPGLAVEWGAVGEVGLV 966 (1392)
Q Consensus 925 ----------------------~~gq~~Yaaana~ld~la~~r~~~-----Glp~~ai~~g~~~~~G~~ 966 (1392)
..+...|+++|+++..+++..+.+ |....++..|.+.+.+|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~ 225 (308)
T PLN00015 157 DLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLF 225 (308)
T ss_pred hhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccc
Confidence 024578999999987777655443 566778888877444443
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.3e-16 Score=181.09 Aligned_cols=182 Identities=15% Similarity=0.106 Sum_probs=140.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++++||||+||||+++|+.|+++|++ |++++|+... .....++++..+.++.++.+|+++.++++++++++ +.
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~-V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWH-VIMACRNLKK---AEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRAL 80 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEECCHHH---HHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999999986 8888887432 22334444444567888999999999999999987 44
Q ss_pred cCCccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC----CCeEEEecccccccC---------
Q psy1119 859 LGPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT----LGQFVVFSSVSCGRG--------- 924 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~----l~~fV~~SS~s~~~G--------- 924 (1392)
.++||+||||||+... ....+.+.++|+..+++|+.|+++|.+++.+.+.+ .+.||++||.+...+
T Consensus 81 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~ 160 (322)
T PRK07453 81 GKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP 160 (322)
T ss_pred CCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCC
Confidence 6789999999998654 23457799999999999999999999888665432 248999999765321
Q ss_pred --------------------------CCCChhHHHHHHHHHHHHHHHHHc-----CCCeEEEEccccCcccc
Q psy1119 925 --------------------------NAGQTNYGMANSIMERICEARRAE-----GLPGLAVEWGAVGEVGL 965 (1392)
Q Consensus 925 --------------------------~~gq~~Yaaana~ld~la~~r~~~-----Glp~~ai~~g~~~~~G~ 965 (1392)
..+...|+++|.+...+++....+ |+.+.+++.|.+...++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~ 232 (322)
T PRK07453 161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPL 232 (322)
T ss_pred CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcc
Confidence 012467999999988877765443 67788888887744444
|
|
| >KOG1207|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.7e-17 Score=162.51 Aligned_cols=164 Identities=20% Similarity=0.254 Sum_probs=137.0
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
+..++.+++||+..|||++++..|++.||+ ++.++|+. +.+....+.....+..+..|+++.+.+.+++.
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~-ViAvaR~~------a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~--- 73 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQ-VIAVARNE------ANLLSLVKETPSLIIPIVGDLSAWEALFKLLV--- 73 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCE-EEEEecCH------HHHHHHHhhCCcceeeeEecccHHHHHHHhhc---
Confidence 346889999999999999999999999998 77788873 12233334445557888999999877766554
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHH-hhhCC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYS-RTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~-~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
..+||||++||||+.-..+|.++|.++|++.|++|+.+.++..+.. +.+.+ .-+.||++||.++.+...+.+.|+++
T Consensus 74 ~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcat 153 (245)
T KOG1207|consen 74 PVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCAT 153 (245)
T ss_pred ccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeec
Confidence 4589999999999999999999999999999999999999998874 33332 23789999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCC
Q psy1119 935 NSIMERICEARRAEGLP 951 (1392)
Q Consensus 935 na~ld~la~~r~~~Glp 951 (1392)
|+++|.+++..+-+.-|
T Consensus 154 KaALDmlTk~lAlELGp 170 (245)
T KOG1207|consen 154 KAALDMLTKCLALELGP 170 (245)
T ss_pred HHHHHHHHHHHHHhhCc
Confidence 99999999998877554
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.7e-16 Score=172.12 Aligned_cols=167 Identities=19% Similarity=0.207 Sum_probs=139.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.+++++||||+||||+++|++|+++|++ |++++|+... ... ..++.+|+++.++++++++++.+.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~-v~~~~r~~~~------------~~~--~~~~~~D~~~~~~~~~~~~~~~~~ 66 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQ-VIGIARSAID------------DFP--GELFACDLADIEQTAATLAQINEI 66 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEEeCCccc------------ccC--ceEEEeeCCCHHHHHHHHHHHHHh
Confidence 3578999999999999999999999986 8888887532 011 135789999999999999988443
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
.++|+||||||+....++.+.+.++|.+.+++|+.|++++.+++.+.+. ..+.||++||.+ ..+.++.++|+++|++
T Consensus 67 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a 145 (234)
T PRK07577 67 HPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSA 145 (234)
T ss_pred CCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHH
Confidence 4689999999998888899999999999999999999999888765442 347999999985 5688899999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
+++|++..+.+ |....+|..|.+..
T Consensus 146 ~~~~~~~~a~e~~~~gi~v~~i~pg~~~t 174 (234)
T PRK07577 146 LVGCTRTWALELAEYGITVNAVAPGPIET 174 (234)
T ss_pred HHHHHHHHHHHHHhhCcEEEEEecCcccC
Confidence 99999876654 78888888887754
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.2e-15 Score=168.40 Aligned_cols=179 Identities=17% Similarity=0.182 Sum_probs=146.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC-CceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY-DVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~-G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++++|||||+|+||+.+|++|+++|++ |++++|+... ......+.++.. +..+..+.+|+++.+++.++++.+ +
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~-v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 81 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYR-VAIHYHRSAA--EADALAAELNALRPGSAAALQADLLDPDALPELVAACVA 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHH--HHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4579999999999999999999999997 6777776422 122222233322 446788999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
.++++|+|||+||.....++.+.+.++|+..++.|+.|+.+|.+++.+.+. ..+.++.+||..+..+.++...|+++|+
T Consensus 82 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 161 (249)
T PRK09135 82 AFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKA 161 (249)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHHH
Confidence 689999999999998878888889999999999999999999998866442 3478888898888788888999999999
Q ss_pred HHHHHHHHHHHc---CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE---GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~---Glp~~ai~~g~~~ 961 (1392)
+++.+++..+.+ +++..++..|.+-
T Consensus 162 ~~~~~~~~l~~~~~~~i~~~~v~pg~~~ 189 (249)
T PRK09135 162 ALEMLTRSLALELAPEVRVNAVAPGAIL 189 (249)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEecccc
Confidence 999999987765 5677777777653
|
|
| >KOG1210|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.8e-16 Score=170.31 Aligned_cols=187 Identities=24% Similarity=0.258 Sum_probs=154.6
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
.+..+||||+.|||+++|..+..+||. |-++.|++.....+.+.++.....- .|.+..+|+.|.+++..+++++ ..+
T Consensus 33 ~~hi~itggS~glgl~la~e~~~~ga~-Vti~ar~~~kl~~a~~~l~l~~~~~-~v~~~S~d~~~Y~~v~~~~~~l~~~~ 110 (331)
T KOG1210|consen 33 RRHILITGGSSGLGLALALECKREGAD-VTITARSGKKLLEAKAELELLTQVE-DVSYKSVDVIDYDSVSKVIEELRDLE 110 (331)
T ss_pred cceEEEecCcchhhHHHHHHHHHccCc-eEEEeccHHHHHHHHhhhhhhhccc-eeeEeccccccHHHHHHHHhhhhhcc
Confidence 379999999999999999999999997 8889999765555554444433322 3889999999999999999999 457
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|+|-+|||||+.-.+.|++++.++++..+++|..|+.|..++..+.++ .+++|+++||.++..|..|.+.|+++|+
T Consensus 111 ~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~ 190 (331)
T KOG1210|consen 111 GPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKF 190 (331)
T ss_pred CCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHH
Confidence 9999999999999999999999999999999999999998776543332 3569999999999999999999999999
Q ss_pred HHHHHHHHHHHcCC----CeEEEEccccCccccccch
Q psy1119 937 IMERICEARRAEGL----PGLAVEWGAVGEVGLVADM 969 (1392)
Q Consensus 937 ~ld~la~~r~~~Gl----p~~ai~~g~~~~~G~~~~~ 969 (1392)
++-+|++..+++-. .......+....-|+-.++
T Consensus 191 alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En 227 (331)
T KOG1210|consen 191 ALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFEREN 227 (331)
T ss_pred HHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccccc
Confidence 99999999998844 3444444444444665443
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1e-15 Score=173.87 Aligned_cols=173 Identities=16% Similarity=0.168 Sum_probs=138.6
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g 860 (1392)
++++||||+||||+++|+.|+++|++ |++++|+..+ ... +..+..+.++.++.||+++.++++++++++ ..++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~-V~~~~r~~~~--~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTH-VISISRTENK--ELT---KLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQ 75 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCE-EEEEeCCchH--HHH---HHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 58999999999999999999999996 8888887421 111 112234667888999999999999999987 4443
Q ss_pred C--cc--EEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC---CCeEEEecccccccCCCCChhHH
Q psy1119 861 P--VD--GIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT---LGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 861 ~--I~--gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~---l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
. ++ .+|||||... ...+.+++.++|.+.++.|+.|++++.+.+.+.+.+ .+.||++||.++..+.+++..|+
T Consensus 76 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~ 155 (251)
T PRK06924 76 EDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYC 155 (251)
T ss_pred cccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHh
Confidence 2 22 7999999754 467899999999999999999999998887665432 35899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHc------CCCeEEEEcccc
Q psy1119 933 MANSIMERICEARRAE------GLPGLAVEWGAV 960 (1392)
Q Consensus 933 aana~ld~la~~r~~~------Glp~~ai~~g~~ 960 (1392)
++|++++.|++..+.+ |....+|..|.+
T Consensus 156 ~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v 189 (251)
T PRK06924 156 SSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVM 189 (251)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCcc
Confidence 9999999999988755 344566666544
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.3e-15 Score=171.01 Aligned_cols=175 Identities=23% Similarity=0.267 Sum_probs=142.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCC-ceEEEEeccCCC-HHHHHHHHHHH-
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYD-VQVLISTDDITT-EAGVVNLLTEA- 856 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G-~~v~~~~~Dv~~-~~~v~~l~~~~- 856 (1392)
.+++++||||++|||+++|+.|+++|++ ++++.|+.... ..+...+.....+ ..+...++|+++ .++++.+++.+
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~-v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGAR-VVVAARRSEEE-AAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCe-EEEEcCCCchh-hHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 5789999999999999999999999998 55556654321 1111112111233 367888999998 99999999998
Q ss_pred hhcCCccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC-ChhHHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG-QTNYGMA 934 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g-q~~Yaaa 934 (1392)
..+|+||.+|||||+... .++.+++.++|+++++.|+.|...+.+++.+++.+. .||++||+++. +.++ .+.|+++
T Consensus 82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~Iv~isS~~~~-~~~~~~~~Y~~s 159 (251)
T COG1028 82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-RIVNISSVAGL-GGPPGQAAYAAS 159 (251)
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC-eEEEECCchhc-CCCCCcchHHHH
Confidence 568999999999999888 599999999999999999999999988766655444 99999999999 8888 5999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEcc
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWG 958 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g 958 (1392)
|+++.+|++..+.+ |..+.+|..|
T Consensus 160 K~al~~~~~~l~~e~~~~gi~v~~v~PG 187 (251)
T COG1028 160 KAALIGLTKALALELAPRGIRVNAVAPG 187 (251)
T ss_pred HHHHHHHHHHHHHHHhhhCcEEEEEEec
Confidence 99999999998866 4446677777
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.7e-16 Score=173.09 Aligned_cols=164 Identities=16% Similarity=0.233 Sum_probs=135.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.+++++||||+||||.++|++|+++|++ |++++|+.... ...++..+.+|++++ +++++ +.+
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~-v~~~~r~~~~~------------~~~~~~~~~~D~~~~--~~~~~---~~~ 65 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQ-VYGVDKQDKPD------------LSGNFHFLQLDLSDD--LEPLF---DWV 65 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCE-EEEEeCCcccc------------cCCcEEEEECChHHH--HHHHH---Hhh
Confidence 5689999999999999999999999997 77778874211 123577889999997 33333 456
Q ss_pred CCccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+++|+||||||+... .++.+.+.++|++.+++|+.|++++.+++.+.+. +.++||++||+++..+.+++..|+++|+
T Consensus 66 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 145 (235)
T PRK06550 66 PSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKH 145 (235)
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHH
Confidence 899999999998643 5788899999999999999999999988865442 3479999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++.+++..+.+ |.+..++..|.+.
T Consensus 146 a~~~~~~~la~~~~~~gi~v~~v~pg~v~ 174 (235)
T PRK06550 146 ALAGFTKQLALDYAKDGIQVFGIAPGAVK 174 (235)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCCcc
Confidence 999999877664 6777888887663
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.8e-15 Score=170.23 Aligned_cols=171 Identities=16% Similarity=0.198 Sum_probs=135.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.++++|||||+||||+++|+.|+++|++ ++++.|+.. +..++..+ ..+ +..+.+|++|.+++.++++ ++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~-v~~~~~~~~--~~~~~l~~---~~~--~~~~~~D~~~~~~~~~~~~---~~ 73 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGAN-VRFTYAGSK--DAAERLAQ---ETG--ATAVQTDSADRDAVIDVVR---KS 73 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCCH--HHHHHHHH---HhC--CeEEecCCCCHHHHHHHHH---Hh
Confidence 4689999999999999999999999997 666655421 11222222 224 3467899999998887765 36
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccc-cCCCCChhHHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCG-RGNAGQTNYGMANSIM 938 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~-~G~~gq~~Yaaana~l 938 (1392)
+++|++|||||......+.+.+.++|++.++.|+.|++++.+.+.+.+...+.||++||.++. .+.++...|+++|+++
T Consensus 74 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~ 153 (237)
T PRK12742 74 GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSAL 153 (237)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchHHhHHHH
Confidence 899999999998877778889999999999999999999977665555556799999999884 5778999999999999
Q ss_pred HHHHHHHHHc----CCCeEEEEccccC
Q psy1119 939 ERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 939 d~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+.+++..+.+ |....+|..|.+.
T Consensus 154 ~~~~~~la~~~~~~gi~v~~v~Pg~~~ 180 (237)
T PRK12742 154 QGMARGLARDFGPRGITINVVQPGPID 180 (237)
T ss_pred HHHHHHHHHHHhhhCeEEEEEecCccc
Confidence 9999887654 5666677776653
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.3e-16 Score=176.07 Aligned_cols=170 Identities=22% Similarity=0.304 Sum_probs=141.8
Q ss_pred cCc--chHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc-CCcc
Q psy1119 788 GGL--GGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL-GPVD 863 (1392)
Q Consensus 788 GG~--gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~-g~I~ 863 (1392)
|++ +|||+++|+.|+++||+ |++++|+.... .....+..+..|.+ ++.||++++++++++++++ +.+ |+||
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~-V~~~~~~~~~~--~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD 75 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGAN-VILTDRNEEKL--ADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRID 75 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEE-EEEEESSHHHH--HHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSES
T ss_pred CCCCCCChHHHHHHHHHHCCCE-EEEEeCChHHH--HHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeE
Confidence 556 99999999999999997 88899985321 22222333456766 4999999999999999998 678 9999
Q ss_pred EEEECcccCCC----ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHH
Q psy1119 864 GIFNLAVVLKD----ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIME 939 (1392)
Q Consensus 864 gvi~~Agv~~d----~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld 939 (1392)
++|||||.... .++.+.+.++|+..++.++.+...+.+++.+++.+.+.+|++||+++..+.++...|+++|++++
T Consensus 76 ~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~ 155 (241)
T PF13561_consen 76 ILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALE 155 (241)
T ss_dssp EEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHH
T ss_pred EEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHH
Confidence 99999998764 78899999999999999999999999988777767799999999999999999999999999999
Q ss_pred HHHHHHHHcCCC--eEEEEccccCc
Q psy1119 940 RICEARRAEGLP--GLAVEWGAVGE 962 (1392)
Q Consensus 940 ~la~~r~~~Glp--~~ai~~g~~~~ 962 (1392)
+|+++...+..| .+.+|.-.+|.
T Consensus 156 ~l~r~lA~el~~~~gIrVN~V~pG~ 180 (241)
T PF13561_consen 156 GLTRSLAKELAPKKGIRVNAVSPGP 180 (241)
T ss_dssp HHHHHHHHHHGGHGTEEEEEEEESS
T ss_pred HHHHHHHHHhccccCeeeeeecccc
Confidence 999998877555 45555544443
|
... |
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.2e-16 Score=180.70 Aligned_cols=176 Identities=19% Similarity=0.144 Sum_probs=136.7
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS--YDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~--~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
..+++++||||+||||+++|+.|+++|++ |++++|+..... ...+.+.. .+.++.++.||++|.++++++++++
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~-vi~~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 89 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGAH-VVLAVRNLDKGK---AAAARITAATPGADVTLQELDLTSLASVRAAADAL 89 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHH---HHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence 36799999999999999999999999996 888898743222 22333332 2567888999999999999999998
Q ss_pred -hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC--CCeEEEeccccccc----------
Q psy1119 857 -NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT--LGQFVVFSSVSCGR---------- 923 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~--l~~fV~~SS~s~~~---------- 923 (1392)
+.+++||+||||||+.... ...+.++|+..+++|+.|.++|.+.+.+.+.+ .+.||++||.++..
T Consensus 90 ~~~~~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~ 167 (306)
T PRK06197 90 RAAYPRIDLLINNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQ 167 (306)
T ss_pred HhhCCCCCEEEECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccC
Confidence 5689999999999986432 45778899999999999999988877665532 46999999987654
Q ss_pred ---CCCCChhHHHHHHHHHHHHHHHHHc----CCCeE--EEEcccc
Q psy1119 924 ---GNAGQTNYGMANSIMERICEARRAE----GLPGL--AVEWGAV 960 (1392)
Q Consensus 924 ---G~~gq~~Yaaana~ld~la~~r~~~----Glp~~--ai~~g~~ 960 (1392)
+.++...|+++|++++.|++..+.+ |.... +++.|.+
T Consensus 168 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v 213 (306)
T PRK06197 168 WERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVS 213 (306)
T ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcc
Confidence 2345679999999999999987665 44433 3345554
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.5e-16 Score=233.87 Aligned_cols=182 Identities=21% Similarity=0.242 Sum_probs=149.2
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcccCCCCCCCc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSFENDDKSKPV 1098 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~~~~~~~~~~ 1098 (1392)
+.++++|+++|++ +.|+.+++||++|+|||+|++|.++++++||+.+++.+| .++|+++|++.+.......
T Consensus 3608 ~~l~~i~~~vL~~---~~i~~~d~Ff~lGgdSl~a~~l~~~l~~~~g~~l~~~~lf~~pti~~la~~~~~~~~~~----- 3679 (3956)
T PRK12467 3608 QQLAAIWADVLGV---EQVGVTDNFFELGGDSLLALQVLSRIRQSLGLKLSLRDLMSAPTIAELAGYSPLGDVPV----- 3679 (3956)
T ss_pred HHHHHHHHHHhCC---CCCCCCcchhcccchHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHhhccccc-----
Confidence 4689999999998 569999999999999999999999999999999999999 9999999998875321100
Q ss_pred cccccCCcccccccCCCChhhHHHHHHhhccccccCCcccccCCccCCCCccccCCCCCceeEeecCCCccccccHHHHh
Q psy1119 1099 STEASGGQVTALSVEDIPDVGIQYLMRTIGDEILANKPVIRLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIATVLEPLAK 1178 (1392)
Q Consensus 1099 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~pLF~vp~agG~~~~y~~La~ 1178 (1392)
.+.+.+... ..+.++|||+|++.|....|.+++.
T Consensus 3680 ------------------------------------~~~~~~~~~----------~~~~~~l~~~h~~~r~~~~~~~l~~ 3713 (3956)
T PRK12467 3680 ------------------------------------NLLLDLNRL----------ETGFPALFCRHEGLGTVFDYEPLAV 3713 (3956)
T ss_pred ------------------------------------ccchhhhhh----------hhcccceeeechhhcchhhhHHHHH
Confidence 000111100 0112459999999999999999999
Q ss_pred hcCCceEEEecC------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHHHHHHHHHHHcCCccE-EEEE
Q psy1119 1179 NINAQVLVFQFD------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKCH-LYLV 1251 (1392)
Q Consensus 1179 ~L~~~~~v~~l~------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v~-LvLi 1251 (1392)
.++.+.++|.++ .+....++++|+..|.+.|+. .||.|||.+.|||+||.+|+|||++|++.|+.+. +.++
T Consensus 3714 ~l~~~~~~~~l~~~~~~~d~~~~~~~~~~~~~y~~~~~~--~~~~~p~~l~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~ 3791 (3956)
T PRK12467 3714 ILEGDRHVLGLTCRHLLDDGWQDTSLQAMAVQYADYILW--QQAKGPYGLLGWSLGGTLARLVAELLEREGESEAFLGLF 3791 (3956)
T ss_pred HhCCCCcEEEEeccccccccCCccchHHHHHHHHHHHHH--hccCCCeeeeeeecchHHHHHHHHHHHHcCCceeEEEEE
Confidence 998777777764 455678999999999999985 4599999999999999999999999999999985 4588
Q ss_pred eCCCCC
Q psy1119 1252 DSAPDY 1257 (1392)
Q Consensus 1252 D~~p~~ 1257 (1392)
|..+|.
T Consensus 3792 ~~~~~~ 3797 (3956)
T PRK12467 3792 DNTLPL 3797 (3956)
T ss_pred eccccc
Confidence 887764
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.9e-15 Score=172.44 Aligned_cols=173 Identities=22% Similarity=0.248 Sum_probs=141.5
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
+++++||||+||||+++|++|+++|++ |++++|+... .+...+.+ .+.++..+.+|+++.+++.++++++ .++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~-v~~~~r~~~~---~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDR-VLALDIDAAA---LAAFADAL--GDARFVPVACDLTDAASLAAALANAAAER 75 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHh--cCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999999997 8888887432 22223333 2456888999999999999999987 678
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+++|+|||+||......+.+.+.++|...+..|+.|++++.+++.+.+ ...+.||++||.++.. ..|...|+++|++
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~~~y~~sK~a 154 (257)
T PRK07074 76 GPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA-ALGHPAYSAAKAG 154 (257)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC-CCCCcccHHHHHH
Confidence 999999999999887888899999999999999999999988875433 2347899999987653 3567899999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++.+++..+.+ |++...+..|.+
T Consensus 155 ~~~~~~~~a~~~~~~gi~v~~v~pg~v 181 (257)
T PRK07074 155 LIHYTKLLAVEYGRFGIRANAVAPGTV 181 (257)
T ss_pred HHHHHHHHHHHHhHhCeEEEEEEeCcC
Confidence 99999988765 566666766655
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.3e-15 Score=179.32 Aligned_cols=172 Identities=19% Similarity=0.188 Sum_probs=136.4
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||+++|+.|+++|++ |++++|+... .+...+++. .+.++.||++|.++++++++++ +.
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~-Vv~~~R~~~~---~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~ 96 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAH-VIVPARRPDV---AREALAGID----GVEVVMLDLADLESVRAFAERFLDS 96 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhc
Confidence 5689999999999999999999999997 8888887432 222233332 2677899999999999999998 56
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC--CCeEEEeccccccc------------C
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT--LGQFVVFSSVSCGR------------G 924 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~--l~~fV~~SS~s~~~------------G 924 (1392)
+++||+||||||+... ....+.+.|+..+++|+.|++++.+++.+.+.. .+.||++||.++.. +
T Consensus 97 ~~~iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~ 174 (315)
T PRK06196 97 GRRIDILINNAGVMAC--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRG 174 (315)
T ss_pred CCCCCEEEECCCCCCC--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCC
Confidence 8999999999998643 245677899999999999999999887665432 36899999986543 2
Q ss_pred CCCChhHHHHHHHHHHHHHHHHH----cCCCeEEEEccccC
Q psy1119 925 NAGQTNYGMANSIMERICEARRA----EGLPGLAVEWGAVG 961 (1392)
Q Consensus 925 ~~gq~~Yaaana~ld~la~~r~~----~Glp~~ai~~g~~~ 961 (1392)
.++...|+++|++++.|++..+. .|+.+.++..|.+.
T Consensus 175 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 215 (315)
T PRK06196 175 YDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGIL 215 (315)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCccc
Confidence 34567899999999999987655 36778888887663
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3e-15 Score=170.60 Aligned_cols=169 Identities=21% Similarity=0.174 Sum_probs=140.2
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh--c
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK--L 859 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~--~ 859 (1392)
++++||||+||||+++|++|+++|++ |++++|+... .+.++..| +..+.||+++.++++.+++.+.+ .
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~-v~~~~r~~~~-------~~~~~~~~--~~~~~~D~~~~~~~~~~~~~i~~~~~ 72 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYR-VLAACRKPDD-------VARMNSLG--FTGILLDLDDPESVERAADEVIALTD 72 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHH-------hHHHHhCC--CeEEEeecCCHHHHHHHHHHHHHhcC
Confidence 68999999999999999999999996 7888887421 12223334 56688999999999999998743 3
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
++++++||+||+....++.+++.++|++.+++|+.|++++.+.+.+.+. ..+.||++||+++..+.++.+.|+++|++
T Consensus 73 ~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~ 152 (256)
T PRK08017 73 NRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYA 152 (256)
T ss_pred CCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHH
Confidence 7899999999988777888999999999999999999998776655442 34789999999999999999999999999
Q ss_pred HHHHHHHH----HHcCCCeEEEEcccc
Q psy1119 938 MERICEAR----RAEGLPGLAVEWGAV 960 (1392)
Q Consensus 938 ld~la~~r----~~~Glp~~ai~~g~~ 960 (1392)
++.+++.. +..|++...+.+|.+
T Consensus 153 ~~~~~~~l~~~~~~~~i~v~~v~pg~~ 179 (256)
T PRK08017 153 LEAWSDALRMELRHSGIKVSLIEPGPI 179 (256)
T ss_pred HHHHHHHHHHHHhhcCCEEEEEeCCCc
Confidence 99988754 345788888877765
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.4e-15 Score=166.89 Aligned_cols=198 Identities=18% Similarity=0.163 Sum_probs=142.9
Q ss_pred EeecCCC--ccccccHHHHhhcCCceEEEecC------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHH
Q psy1119 1161 FMVPGIE--GIATVLEPLAKNINAQVLVFQFD------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVA 1232 (1392)
Q Consensus 1161 F~vp~ag--G~~~~y~~La~~L~~~~~v~~l~------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA 1232 (1392)
||+|+++ |++..|.+|+..|.....++.++ .+....+++++++.|.+.++.. .+.+||.++|||+||.+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 1 ICFPSTAAPSGPHEYARLAAALRGRRDVSALPLPGFGPGEPLPASADALVEAQAEAVLRA--AGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred CccCCCCCCCcHHHHHHHHHhcCCCccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHh--cCCCCeEEEEECHHHHHH
Confidence 7999988 67889999999999877777765 3456679999999999988754 378999999999999999
Q ss_pred HHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHHHHHHHhhccccCCC
Q psy1119 1233 LELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDPK 1311 (1392)
Q Consensus 1233 ~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~y~~~~ 1311 (1392)
+++|++|+.+|..+ .++++|+.++..... ....+...+.+............ .....++.++.+...|.+.
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~- 150 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDTYPPGDPAP---EGWLPELLRGVFEREDSFVPMDD----ARLTAMGAYLRLFGGWTPG- 150 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEccCCCCCccc---hhhHHHHHHHHHhhhcccccccc----hhhhHHHHHHHHhccCCCC-
Confidence 99999999999877 788999876543211 11112222222111110000111 1123466677777788765
Q ss_pred CCcccceEEEEeeCCCC-C-CChhhcCcccccCCCeEEEEEccCccccccChHHHHHHHhhh
Q psy1119 1312 HKAFGGNITLLRPTEQA-L-PTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHED 1371 (1392)
Q Consensus 1312 ~~~~~~pi~l~~a~~~~-~-~~~~~~~W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~ 1371 (1392)
++++|+++++++++. . ......+|++++.+.++++.++|+|++|++. ....++..++
T Consensus 151 --~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~g~H~~~~~~-~~~~~~~~~~ 209 (212)
T smart00824 151 --PVAAPTLLVRASEPLAEWPDEDPDGWRAHWPLPHTVVDVPGDHFTMMEE-HAAATARAVH 209 (212)
T ss_pred --CCCCCEEEEeccCCCCCCCCCCcccccCCCCCCceeEEccCchHHHHHH-hHHHHHHHHH
Confidence 789999999998876 2 2234468999999999999999999999875 5555555444
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >KOG1199|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-16 Score=159.16 Aligned_cols=174 Identities=21% Similarity=0.264 Sum_probs=136.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++-+.+||||.+|+|++.|+.|+++||. ++++.-....-.... ++.|.+|.+..+||+++++++.++..+ .+
T Consensus 8 kglvalvtggasglg~ataerlakqgas-v~lldlp~skg~~va------kelg~~~vf~padvtsekdv~aala~ak~k 80 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGAS-VALLDLPQSKGADVA------KELGGKVVFTPADVTSEKDVRAALAKAKAK 80 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCce-EEEEeCCcccchHHH------HHhCCceEEeccccCcHHHHHHHHHHHHhh
Confidence 5678999999999999999999999998 666654432222222 345889999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCc------cccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--------CCCeEEEecccccccC
Q psy1119 859 LGPVDGIFNLAVVLKDA------LFENQTPEDFNASLGPKANATKYFDKYSRTMCP--------TLGQFVVFSSVSCGRG 924 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~------~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--------~l~~fV~~SS~s~~~G 924 (1392)
||++|..+||||+.-.. .=...+.|+|++++++|+.|++|..++...+|. ..+.+|+..|++++-|
T Consensus 81 fgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdg 160 (260)
T KOG1199|consen 81 FGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDG 160 (260)
T ss_pred ccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecC
Confidence 99999999999975322 123457899999999999999999887755542 1268999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHH----HcCCCeEEEEcccc
Q psy1119 925 NAGQTNYGMANSIMERICEARR----AEGLPGLAVEWGAV 960 (1392)
Q Consensus 925 ~~gq~~Yaaana~ld~la~~r~----~~Glp~~ai~~g~~ 960 (1392)
..||++|+|+|+++-+++--.. -.|.....|..|.+
T Consensus 161 q~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf 200 (260)
T KOG1199|consen 161 QTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLF 200 (260)
T ss_pred ccchhhhhcccCceEeeechhhhhcccCceEEEeeccccc
Confidence 9999999999999988765332 33444445544443
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.3e-15 Score=166.76 Aligned_cols=162 Identities=14% Similarity=0.095 Sum_probs=127.0
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
.++||||+||||+++|+.|+++|++ |++++|+.. ......+.+ .+..+.||++++++++++++.+.. ++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~-v~~~~r~~~---~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~--~i 70 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHK-VTLVGARRD---DLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPH--HL 70 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh--cC
Confidence 4899999999999999999999996 888888732 122222221 245678999999999999887643 69
Q ss_pred cEEEECcccCCC------ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 863 DGIFNLAVVLKD------ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 863 ~gvi~~Agv~~d------~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
|.+|||||.... ..+.+ +.++|+++++.|+.|++++.+++.+.+.+.+.||++||.+ .++.+.|+++|+
T Consensus 71 d~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~~~~~~Y~asKa 145 (223)
T PRK05884 71 DTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----PPAGSAEAAIKA 145 (223)
T ss_pred cEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----CCCccccHHHHH
Confidence 999999985321 13444 5789999999999999999999877665668999999976 356789999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++.+|++..+.+ |....+|..|.+
T Consensus 146 al~~~~~~la~e~~~~gI~v~~v~PG~v 173 (223)
T PRK05884 146 ALSNWTAGQAAVFGTRGITINAVACGRS 173 (223)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCcc
Confidence 999999998886 344556666554
|
|
| >KOG1610|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.2e-14 Score=161.27 Aligned_cols=175 Identities=23% Similarity=0.111 Sum_probs=145.2
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
.++|.++|||+-+|+|+.+|+.|.++|.+.+.-+ -. .+.++....+.+ ..+...++.|||++++++++.+.+++
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agc-l~---~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~ 100 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGC-LT---EEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKK 100 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEe-ec---CchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999855555 22 233333333332 33566679999999999999988732
Q ss_pred -c--CCccEEEECcccC-CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHH
Q psy1119 859 -L--GPVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGM 933 (1392)
Q Consensus 859 -~--g~I~gvi~~Agv~-~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaa 933 (1392)
. ..+-|||||||+. ..++.+=++.++|+.++++|..|+..+.+++.++.+ ..|++|++||++|..+.|+-+.|++
T Consensus 101 ~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~~g~Y~~ 180 (322)
T KOG1610|consen 101 HLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPALGPYCV 180 (322)
T ss_pred hcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCcccccchh
Confidence 2 3599999999964 678889999999999999999999999999987764 5699999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEccc
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGA 959 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~ 959 (1392)
+|+++++|+...|.+ |.....|+.|.
T Consensus 181 SK~aVeaf~D~lR~EL~~fGV~VsiiePG~ 210 (322)
T KOG1610|consen 181 SKFAVEAFSDSLRRELRPFGVKVSIIEPGF 210 (322)
T ss_pred hHHHHHHHHHHHHHHHHhcCcEEEEeccCc
Confidence 999999999999988 55667777773
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.5e-15 Score=165.94 Aligned_cols=169 Identities=20% Similarity=0.171 Sum_probs=134.6
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
++++||||+||||.++|++|+++|++ |++++|+...... ++.+ .++.+..||++|+++++++++.+.. ++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~----~~~~----~~~~~~~~D~~d~~~~~~~~~~~~~-~~ 71 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQ-VTATVRGPQQDTA----LQAL----PGVHIEKLDMNDPASLDQLLQRLQG-QR 71 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCE-EEEEeCCCcchHH----HHhc----cccceEEcCCCCHHHHHHHHHHhhc-CC
Confidence 68999999999999999999999996 8888998643221 2221 1456778999999999999988743 58
Q ss_pred ccEEEECcccCCC--ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCC-CeEEEecccccccCC---CCChhHHHHH
Q psy1119 862 VDGIFNLAVVLKD--ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTL-GQFVVFSSVSCGRGN---AGQTNYGMAN 935 (1392)
Q Consensus 862 I~gvi~~Agv~~d--~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l-~~fV~~SS~s~~~G~---~gq~~Yaaan 935 (1392)
+|+||||||+... .++.+.+.++|...+.+|+.+++++.+++.+.+... +.+|++||..+..+. .+...|+++|
T Consensus 72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK 151 (225)
T PRK08177 72 FDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASK 151 (225)
T ss_pred CCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHH
Confidence 9999999998643 467889999999999999999999998886665433 789999998776543 4677899999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++++.|++.++.+ |....+|..|.+
T Consensus 152 ~a~~~~~~~l~~e~~~~~i~v~~i~PG~i 180 (225)
T PRK08177 152 AALNSMTRSFVAELGEPTLTVLSMHPGWV 180 (225)
T ss_pred HHHHHHHHHHHHHhhcCCeEEEEEcCCce
Confidence 9999999988766 333555655544
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.9e-15 Score=164.02 Aligned_cols=168 Identities=21% Similarity=0.213 Sum_probs=133.5
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
++++||||+||||+++|++|+++|++ |++++|+... .++++..+ +.++.+|+++.++++++++++.. ++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~-v~~~~r~~~~-------~~~~~~~~--~~~~~~D~~~~~~v~~~~~~~~~-~~ 70 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWR-VIATARDAAA-------LAALQALG--AEALALDVADPASVAGLAWKLDG-EA 70 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCE-EEEEECCHHH-------HHHHHhcc--ceEEEecCCCHHHHHHHHHHhcC-CC
Confidence 58999999999999999999999997 7778887421 12233334 34689999999999998877643 58
Q ss_pred ccEEEECcccC--CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCCh---hHHHHH
Q psy1119 862 VDGIFNLAVVL--KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQT---NYGMAN 935 (1392)
Q Consensus 862 I~gvi~~Agv~--~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~---~Yaaan 935 (1392)
+|++||+||.. ....+.+++.++|+..++.|+.+++++.+++.+++. ..+.||++||.++..+..... .|+++|
T Consensus 71 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK 150 (222)
T PRK06953 71 LDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASK 150 (222)
T ss_pred CCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhH
Confidence 99999999986 345677889999999999999999999988876543 347899999998888765443 599999
Q ss_pred HHHHHHHHHHHHc--CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE--GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~--Glp~~ai~~g~~ 960 (1392)
++++.+++..+.+ +.+..+|..|.+
T Consensus 151 ~a~~~~~~~~~~~~~~i~v~~v~Pg~i 177 (222)
T PRK06953 151 AALNDALRAASLQARHATCIALHPGWV 177 (222)
T ss_pred HHHHHHHHHHhhhccCcEEEEECCCee
Confidence 9999999987655 445566665544
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=8e-15 Score=165.80 Aligned_cols=170 Identities=21% Similarity=0.195 Sum_probs=139.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
++++++||||+||||+.+|+.|+++|++ |++++|+... .+...+ ..+ +..+.+|+++.++++++++. .
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~-V~~~~r~~~~---~~~~~~---~~~--~~~~~~D~~~~~~v~~~~~~---~ 75 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGAR-VVAAARNAAA---LDRLAG---ETG--CEPLRLDVGDDAAIRAALAA---A 75 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHH---HhC--CeEEEecCCCHHHHHHHHHH---h
Confidence 5689999999999999999999999996 8888987421 111111 123 44678999999988887765 5
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-C--CCeEEEecccccccCCCCChhHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-T--LGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~--l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+++|+|||+||......+.+.+.++|++.++.++.+++++.+++.+.+. . .++||++||.++..+.++.+.|+++|+
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~ 155 (245)
T PRK07060 76 GAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKA 155 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHH
Confidence 7899999999998777888899999999999999999999988865432 2 278999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++.+++..+.+ |++..++..|.+.
T Consensus 156 a~~~~~~~~a~~~~~~~i~v~~v~pg~v~ 184 (245)
T PRK07060 156 ALDAITRVLCVELGPHGIRVNSVNPTVTL 184 (245)
T ss_pred HHHHHHHHHHHHHhhhCeEEEEEeeCCCC
Confidence 999999877654 6777777776553
|
|
| >KOG1208|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.5e-15 Score=169.94 Aligned_cols=182 Identities=21% Similarity=0.292 Sum_probs=143.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++++|||+++|||+++|+.|+.+|++ ||+..|+......+...+.. +....++.+.+||+++.++|+++.+.. ..
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga~-Vv~~~R~~~~~~~~~~~i~~-~~~~~~i~~~~lDLssl~SV~~fa~~~~~~ 111 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGAH-VVLACRNEERGEEAKEQIQK-GKANQKIRVIQLDLSSLKSVRKFAEEFKKK 111 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCCE-EEEEeCCHHHHHHHHHHHHh-cCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence 4589999999999999999999999975 99999996443333333333 234467888999999999999999998 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCC--CeEEEeccccccc--------C----
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTL--GQFVVFSSVSCGR--------G---- 924 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l--~~fV~~SS~s~~~--------G---- 924 (1392)
++|+|++|||||++.... ..|.|.++..+++|..|.+.|.+++.+.++.. .+||++||..+.. +
T Consensus 112 ~~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~ 189 (314)
T KOG1208|consen 112 EGPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAK 189 (314)
T ss_pred CCCccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhcc
Confidence 899999999999987655 77889999999999999999999887765433 6999999988611 0
Q ss_pred -CCCChhHHHHHHHHHHHHHHHHHc---CCCeEEEEccccCcccc
Q psy1119 925 -NAGQTNYGMANSIMERICEARRAE---GLPGLAVEWGAVGEVGL 965 (1392)
Q Consensus 925 -~~gq~~Yaaana~ld~la~~r~~~---Glp~~ai~~g~~~~~G~ 965 (1392)
..+...|+.+|-+..-++...+++ |.-..+++.|.+...++
T Consensus 190 ~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l 234 (314)
T KOG1208|consen 190 LYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGL 234 (314)
T ss_pred CccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccce
Confidence 222235999999998888876655 45566777666654443
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.9e-14 Score=162.14 Aligned_cols=175 Identities=19% Similarity=0.219 Sum_probs=140.5
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++++||||+||||.++++.|+++|++ |++++|+... .....+.+...+ .+..+.||++++++++++++++ ..
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~-V~~~~r~~~~---~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQ-VCINSRNENK---LKRMKKTLSKYG-NIHYVVGDVSSTESARNVIEKAAKV 78 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHhcC-CeEEEECCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999996 8888887422 222223333333 5788899999999999999998 45
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc-CCCCChhHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR-GNAGQTNYGMANSI 937 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~-G~~gq~~Yaaana~ 937 (1392)
++++|++||++|......+.+ .++|+..++.++.+.+++.+.+.+++.+.+.||++||.++.. +.+....|+++|++
T Consensus 79 ~~~id~ii~~ag~~~~~~~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~ 156 (238)
T PRK05786 79 LNAIDGLVVTVGGYVEDTVEE--FSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAG 156 (238)
T ss_pred hCCCCEEEEcCCCcCCCchHH--HHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHHHHHHHH
Confidence 889999999998765544443 388999999999999999888877665668899999988754 56778899999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++.+++..+.+ |++..++..|.+.
T Consensus 157 ~~~~~~~~~~~~~~~gi~v~~i~pg~v~ 184 (238)
T PRK05786 157 LAKAVEILASELLGRGIRVNGIAPTTIS 184 (238)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEecCccC
Confidence 99888876654 7888888877654
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.9e-14 Score=163.27 Aligned_cols=168 Identities=18% Similarity=0.181 Sum_probs=130.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++++||||+||||+++++.|+++|++ |++++|+... ..+.....++..+.++..+.+|++++++++++++++ +.
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~-V~~~~r~~~~--~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAH-VVVNYRQKAP--RANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE 81 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCE-EEEEeCCchH--hHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4589999999999999999999999997 7777886421 223334455556778889999999999999999987 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccc-----cCCCCChhHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCG-----RGNAGQTNYGM 933 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~-----~G~~gq~~Yaa 933 (1392)
++++|.||||||...... .++...+++|+.|+.++.+++.+.+...+.||++||..+. .+.++++.|++
T Consensus 82 ~~~~d~vi~~ag~~~~~~------~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~ 155 (248)
T PRK07806 82 FGGLDALVLNASGGMESG------MDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVAR 155 (248)
T ss_pred CCCCcEEEECCCCCCCCC------CCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHH
Confidence 889999999998643221 1356778999999999999887766555789999997654 23355789999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEE
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVE 956 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~ 956 (1392)
+|++++.+++..+.+ |....++.
T Consensus 156 sK~a~e~~~~~l~~~~~~~~i~v~~v~ 182 (248)
T PRK07806 156 SKRAGEDALRALRPELAEKGIGFVVVS 182 (248)
T ss_pred HHHHHHHHHHHHHHHhhccCeEEEEeC
Confidence 999999999987654 44444443
|
|
| >KOG1014|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=7e-15 Score=163.09 Aligned_cols=165 Identities=19% Similarity=0.130 Sum_probs=138.6
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
++-++||||+.|||++.|+.||+||-+ |+|+||+..+....+..++ +..+++|.++.+|.++.+.+-+-+.+.-.-.
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~n-vvLIsRt~~KL~~v~kEI~--~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~ 125 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFN-VVLISRTQEKLEAVAKEIE--EKYKVEVRIIAIDFTKGDEVYEKLLEKLAGL 125 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHH--HHhCcEEEEEEEecCCCchhHHHHHHHhcCC
Confidence 478999999999999999999999997 9999999765555444443 3557999999999999887444333322235
Q ss_pred CccEEEECcccCC--CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-C-CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 861 PVDGIFNLAVVLK--DALFENQTPEDFNASLGPKANATKYFDKYSRTMC-P-TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 861 ~I~gvi~~Agv~~--d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~-~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|..+|||+|... ...|.+.+.+.++..+.+|+.++..+.+...+.| . ..|.+|++||.+|..+.|..+.|+++|+
T Consensus 126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~ 205 (312)
T KOG1014|consen 126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKA 205 (312)
T ss_pred ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHH
Confidence 8999999999987 4568899998999999999999999998876544 2 4589999999999999999999999999
Q ss_pred HHHHHHHHHHHc
Q psy1119 937 IMERICEARRAE 948 (1392)
Q Consensus 937 ~ld~la~~r~~~ 948 (1392)
|++.|++.++.+
T Consensus 206 ~v~~~S~~L~~E 217 (312)
T KOG1014|consen 206 FVDFFSRCLQKE 217 (312)
T ss_pred HHHHHHHHHHHH
Confidence 999999998876
|
|
| >KOG1209|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=6e-15 Score=152.37 Aligned_cols=162 Identities=17% Similarity=0.096 Sum_probs=138.7
Q ss_pred CCCeEEEEcC-cchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHh-cCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 780 SNKSYIICGG-LGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK-SYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 780 ~~~~ylItGG-~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~-~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
..+.++|||+ .||||-++|+.++++|.+ |+.++|+-.+- ..|. +.| ....+.||++++++..+..++.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~-V~AtaR~~e~M-------~~L~~~~g--l~~~kLDV~~~~~V~~v~~evr 75 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYL-VYATARRLEPM-------AQLAIQFG--LKPYKLDVSKPEEVVTVSGEVR 75 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeE-EEEEccccchH-------hhHHHhhC--CeeEEeccCChHHHHHHHHHHh
Confidence 3467788875 689999999999999998 88888874321 1222 334 6678999999999999999983
Q ss_pred --hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhh-CCCCCeEEEecccccccCCCCChhHHHH
Q psy1119 858 --KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTM-CPTLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 --~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~-~~~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
.+|.||.++||||+....+..+.+.++.+.+|++|+.|..+..+++..+ .+..+-||+..|+++..+.|--+.|+|+
T Consensus 76 ~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsAs 155 (289)
T KOG1209|consen 76 ANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSAS 155 (289)
T ss_pred hCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhHH
Confidence 5799999999999999999999999999999999999999999887643 3566999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCC
Q psy1119 935 NSIMERICEARRAEGLP 951 (1392)
Q Consensus 935 na~ld~la~~r~~~Glp 951 (1392)
|+++.++++.+|-+-.|
T Consensus 156 KAAihay~~tLrlEl~P 172 (289)
T KOG1209|consen 156 KAAIHAYARTLRLELKP 172 (289)
T ss_pred HHHHHHhhhhcEEeeec
Confidence 99999999998877555
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=7e-14 Score=156.12 Aligned_cols=167 Identities=20% Similarity=0.209 Sum_probs=134.4
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
++||||||+|+||+++|++|+++ .+ |++++|+... .....+.. ..+.++.+|++|.++++++++. +++
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~-V~~~~r~~~~---~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~---~~~ 71 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HT-LLLGGRPAER---LDELAAEL----PGATPFPVDLTDPEAIAAAVEQ---LGR 71 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CC-EEEEeCCHHH---HHHHHHHh----ccceEEecCCCCHHHHHHHHHh---cCC
Confidence 68999999999999999999999 65 8888887421 11111111 2467789999999999887765 358
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-CCCCeEEEecccccccCCCCChhHHHHHHHHHH
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC-PTLGQFVVFSSVSCGRGNAGQTNYGMANSIMER 940 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~ 940 (1392)
+|+|||+||......+.+.+.++|.+.++.++.+..++.+.+.+.+ ...++||++||.++..+.++...|+++|++++.
T Consensus 72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~ 151 (227)
T PRK08219 72 LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPGWGSYAASKFALRA 151 (227)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCCCchHHHHHHHHHH
Confidence 9999999999877788899999999999999999988877765433 235789999999999999999999999999999
Q ss_pred HHHHHHHc--C-CCeEEEEcccc
Q psy1119 941 ICEARRAE--G-LPGLAVEWGAV 960 (1392)
Q Consensus 941 la~~r~~~--G-lp~~ai~~g~~ 960 (1392)
+++.++.+ + ++..++.+|.+
T Consensus 152 ~~~~~~~~~~~~i~~~~i~pg~~ 174 (227)
T PRK08219 152 LADALREEEPGNVRVTSVHPGRT 174 (227)
T ss_pred HHHHHHHHhcCCceEEEEecCCc
Confidence 99987664 4 55666666543
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.1e-14 Score=158.62 Aligned_cols=145 Identities=15% Similarity=0.127 Sum_probs=109.4
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.+++++||||+||||+++|+.|+++|++ |++++|+... ... .. .. +. ...+.+|+++.+++.+ .+
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~-Vi~~~r~~~~--~~~---~~-~~-~~-~~~~~~D~~~~~~~~~------~~ 77 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAK-VIGLTHSKIN--NSE---SN-DE-SP-NEWIKWECGKEESLDK------QL 77 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCE-EEEEECCchh--hhh---hh-cc-CC-CeEEEeeCCCHHHHHH------hc
Confidence 4689999999999999999999999997 7777887411 111 11 11 21 2567899999988764 35
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC-----CCeEEEecccccccCCCCChhHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT-----LGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~-----l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
++||++|||||+.. ..+.+.++|++.++.|+.|++++.+++.+.+.. .+.+++.||.++..+ ++.+.|+++
T Consensus 78 ~~iDilVnnAG~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~aS 153 (245)
T PRK12367 78 ASLDVLILNHGINP---GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEIS 153 (245)
T ss_pred CCCCEEEECCccCC---cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHHH
Confidence 78999999999743 346789999999999999999999988665522 234556667665544 577889999
Q ss_pred HHHHHHHHH
Q psy1119 935 NSIMERICE 943 (1392)
Q Consensus 935 na~ld~la~ 943 (1392)
|+++..+..
T Consensus 154 Kaal~~~~~ 162 (245)
T PRK12367 154 KRLIGQLVS 162 (245)
T ss_pred HHHHHHHHH
Confidence 999976653
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=8.3e-14 Score=156.67 Aligned_cols=153 Identities=18% Similarity=0.187 Sum_probs=122.5
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCc-eEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGAR-KLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr-~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
++++||||+||||+++|+.|+++|.. .+++..|+.... ..+.++..++||+++.++++++. ++++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-----------~~~~~~~~~~~Dls~~~~~~~~~---~~~~ 66 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-----------FQHDNVQWHALDVTDEAEIKQLS---EQFT 66 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-----------cccCceEEEEecCCCHHHHHHHH---HhcC
Confidence 36899999999999999999999643 255555543210 12457888999999999988854 4568
Q ss_pred CccEEEECcccCC------CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC--CCeEEEeccccccc---CCCCCh
Q psy1119 861 PVDGIFNLAVVLK------DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT--LGQFVVFSSVSCGR---GNAGQT 929 (1392)
Q Consensus 861 ~I~gvi~~Agv~~------d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~--l~~fV~~SS~s~~~---G~~gq~ 929 (1392)
++|.||||||+.. ...+.+.+.+.|...+..|+.+++++.+.+.+.+.+ .+.++++||..+.. +.++..
T Consensus 67 ~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~ 146 (235)
T PRK09009 67 QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWY 146 (235)
T ss_pred CCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcc
Confidence 9999999999975 346788999999999999999999999988776543 36899999876644 246788
Q ss_pred hHHHHHHHHHHHHHHHHHc
Q psy1119 930 NYGMANSIMERICEARRAE 948 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~ 948 (1392)
.|+++|+++++|++..+.+
T Consensus 147 ~Y~asK~a~~~~~~~la~e 165 (235)
T PRK09009 147 SYRASKAALNMFLKTLSIE 165 (235)
T ss_pred hhhhhHHHHHHHHHHHHHH
Confidence 9999999999999998866
|
|
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=99.50 E-value=2e-13 Score=138.73 Aligned_cols=116 Identities=28% Similarity=0.476 Sum_probs=103.4
Q ss_pred hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCc-hhHHHHHH
Q psy1119 577 GVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLA-EEKLQASV 655 (1392)
Q Consensus 577 gVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~-~~~l~~s~ 655 (1392)
|||++++|+|++.|++|++++++++|++++++ +|+++++++++.++.+.+++.++++|+|+||||++ ++.++.++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~----~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~ 76 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKE----LGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI 76 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH----TTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHh----hcccccccccccccccccccccccccceEEEEecCcHHHHHHHH
Confidence 79999999999999999999999999999987 68999999999999999999999999999999999 78999999
Q ss_pred hcccCCeEEEEEcccccccCccccccccCCCcEEEEEechh
Q psy1119 656 RCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDN 696 (1392)
Q Consensus 656 ~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~ 696 (1392)
++++++|+++.+|...........+.++.+++++.|+....
T Consensus 77 ~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 117 (130)
T PF00107_consen 77 KLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGS 117 (130)
T ss_dssp HHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGG
T ss_pred HHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCC
Confidence 99999999999998752233333456778999999997665
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.49 E-value=9.8e-13 Score=157.49 Aligned_cols=152 Identities=20% Similarity=0.156 Sum_probs=113.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.+++++||||+||||+++|+.|+++|++ |++++|+... .. +.....+..+..+.+|++|.+++.+. +
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~-Vi~l~r~~~~---l~---~~~~~~~~~v~~v~~Dvsd~~~v~~~------l 243 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAK-VVALTSNSDK---IT---LEINGEDLPVKTLHWQVGQEAALAEL------L 243 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHH---HH---HHHhhcCCCeEEEEeeCCCHHHHHHH------h
Confidence 5789999999999999999999999997 7777776421 11 11222234567789999999887654 3
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCC-----CeEEEecccccccCCCCChhHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l-----~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+++|.+|||||+.. ..+.+.++|++.++.|+.|+.++.+++.+.+... +.++..+|.++ .+.++.+.|+|+
T Consensus 244 ~~IDiLInnAGi~~---~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~~~~~~~~Y~AS 319 (406)
T PRK07424 244 EKVDILIINHGINV---HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-VNPAFSPLYELS 319 (406)
T ss_pred CCCCEEEECCCcCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-ccCCCchHHHHH
Confidence 58999999999754 2478899999999999999999999886654221 23333344333 344556789999
Q ss_pred HHHHHHHHHHHHHc
Q psy1119 935 NSIMERICEARRAE 948 (1392)
Q Consensus 935 na~ld~la~~r~~~ 948 (1392)
|+++.+|++.|+.+
T Consensus 320 KaAl~~l~~l~~~~ 333 (406)
T PRK07424 320 KRALGDLVTLRRLD 333 (406)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999776543
|
|
| >KOG1611|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.5e-12 Score=137.54 Aligned_cols=166 Identities=19% Similarity=0.211 Sum_probs=134.4
Q ss_pred CeEEEEcCcchHHHHHHHHHHHh-CCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc-
Q psy1119 782 KSYIICGGLGGFGLELADWLVLR-GARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL- 859 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~-GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~- 859 (1392)
++|+||||-+|||+.+.+.|.+. |..+++-..|+.... ....+.+.....++++++.||++-+++..+++++++.
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV 80 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV 80 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence 57999999999999999999976 888777666664322 3444555445678999999999999999999998653
Q ss_pred --CCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCC-------------CeEEEeccccccc
Q psy1119 860 --GPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTL-------------GQFVVFSSVSCGR 923 (1392)
Q Consensus 860 --g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l-------------~~fV~~SS~s~~~ 923 (1392)
..++.+|||||+.. .....+-+.+.|.+.+++|+.|+..+.|.+.++..+. ..+|++||..+..
T Consensus 81 g~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~ 160 (249)
T KOG1611|consen 81 GSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI 160 (249)
T ss_pred ccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc
Confidence 47999999999864 3556777789999999999999999999987765211 2789899988766
Q ss_pred C---CCCChhHHHHHHHHHHHHHHHHHcCC
Q psy1119 924 G---NAGQTNYGMANSIMERICEARRAEGL 950 (1392)
Q Consensus 924 G---~~gq~~Yaaana~ld~la~~r~~~Gl 950 (1392)
| ..++.+|.++|++|..|++....+-.
T Consensus 161 ~~~~~~~~~AYrmSKaAlN~f~ksls~dL~ 190 (249)
T KOG1611|consen 161 GGFRPGGLSAYRMSKAALNMFAKSLSVDLK 190 (249)
T ss_pred CCCCCcchhhhHhhHHHHHHHHHHhhhhhc
Confidence 5 46789999999999999999877643
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=8.6e-12 Score=132.37 Aligned_cols=137 Identities=20% Similarity=0.194 Sum_probs=103.2
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+++++||||++|||+++|+.|+++|++ |++++|+.. ......++++..|.++.++.+|+++.++++++++++ +
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~-V~l~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~ 89 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAK-VIVTDIDQE---SGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLN 89 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCCE-EEEEECCHH---HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 36789999999999999999999999997 888888742 223334455555777888899999999999999987 6
Q ss_pred hcCCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhh-C--------CCCCeEEEecccccc
Q psy1119 858 KLGPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTM-C--------PTLGQFVVFSSVSCG 922 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~-~--------~~l~~fV~~SS~s~~ 922 (1392)
.+|+||++|||||+.. +.++.+.+.++|+ ..++.+++...+..... . .+.+.|.++||.+..
T Consensus 90 ~~G~iDilVnnAG~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (169)
T PRK06720 90 AFSRIDMLFQNAGLYKIDSIFSRQQENDSN---VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS 161 (169)
T ss_pred HcCCCCEEEECCCcCCCCCcccccchhHhh---ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence 7899999999999877 4567776766644 44555666654443222 1 234789999986553
|
|
| >PF14765 PS-DH: Polyketide synthase dehydratase; PDB: 3KG7_D 3KG9_A 3KG8_B 3HRR_A 3HRQ_A 3EL6_A 3KG6_B 2VZ8_A 2VZ9_A | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.2e-12 Score=150.39 Aligned_cols=240 Identities=20% Similarity=0.268 Sum_probs=168.9
Q ss_pred CCCCceeEeeccccCCCCcccccccchh-hHH----HHHHHHHHHHHHHcCCCCccCCEEeeeeeeeeeeeeCCCCeEEE
Q psy1119 30 PRKGLVQLKNSFRSLSASPKRLASTALD-RVY----QRFQMAWETVSLMRGELYTEVPVVFENIKFMRATNVPKEGSVEF 104 (1392)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~l~gh~id-r~l----~yl~l~W~t~a~~~~~~~~~~pv~fe~v~~~rat~l~~~~~v~~ 104 (1392)
+..+...+...++ .++..||.||+|+ +.+ +||-++++....+.+.. ++.++|++|++...++++...++
T Consensus 11 ~~~~~~~~~~~l~--~~~~~~l~dH~v~g~~i~Pga~~le~~~~Aa~~~~~~~----~~~l~~~~~~~pl~l~~~~~~~l 84 (295)
T PF14765_consen 11 SSPGSVVFESRLS--PDEHPFLRDHRVQGQPILPGAAYLEMALEAARQLSPSS----VVELRDLRFHRPLVLDEGEPREL 84 (295)
T ss_dssp TTTSEEEEEEEEC--TTTTGGGGGEEETTEEEE-HHHHHHHHHHHHHHHTCSS----EEEEEEEEE-S-EEE-TTTEEEE
T ss_pred CCCCeEEEEEEEC--CccCchhhcCEECCEeeehhHHHHHHHHHHHHHhhCcc----cceEEEeEecccEEecCCCcEEE
Confidence 4677788888888 5565699999999 777 99999999998887655 99999999999999998889999
Q ss_pred EEEEEec-c--c----cEEEeeCC------cEEEEEEEEccCCcc--cccccCCCCCCCCCCCcccccCChhhHHHHHHh
Q psy1119 105 IVMVQKG-S--G----NFEIVEGG------AAIVTGKVYIPADVK--TEMVRIPDQYKIPRTEGEAIELQSRDIYKELRL 169 (1392)
Q Consensus 105 ~v~i~~~-s--g----~Fei~~~~------~~vvsG~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~diYkel~l 169 (1392)
.+.+.+. + + +|+|...+ .+-++|+|....... .....++.-....+...+...++.+++|++++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~h~~g~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Y~~~~~ 164 (295)
T PF14765_consen 85 RVELDPEEDGSGSMEWRFEIFSRNKDDSGWTLHASGQVSLDKDPPPEPPPLDLESLKARCPEPPDGEPLDIEEFYERLAE 164 (295)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEEESTCCGEEEEEEEEEEEESSHC-SGGBGBHHHHHHHHHEECCCEEEHHHHHHHHHHH
T ss_pred EEEEEEccCCCCccceEEEEEEecCCCcceEEeeeeEEEeeecccccccccccccccccccccccccccchHHHHHhHHh
Confidence 9999988 3 3 78887522 578999999765432 111111100000000111124789999999999
Q ss_pred cCCccCccccceeeeccCCceeEEEecccch----------hhhhhhhheecc----ccCCCceecccceeeEEEcc-h-
Q psy1119 170 RGYHYKGLFRSLNVADGAGTQGKIRWHNNWV----------AFMDNMLQLQIL----QYDTRGLFVPTSIQKLVINV-S- 233 (1392)
Q Consensus 170 rGy~y~~~F~~i~~~~~~g~~g~i~W~~nWv----------~f~d~mlQ~~il----~~~~~~l~~Pt~i~~~~i~p-~- 233 (1392)
+|+.||+.||+|.+...++..+++.+..++. ..||++||...+ ......++||..|+++.|.. .
T Consensus 165 ~gl~~g~~fr~i~~i~~~~~~~~~~~~~~~~~~~~~~~l~P~llD~~lq~~~~~~~~~~~~~~~~lP~~i~~~~~~~~~~ 244 (295)
T PF14765_consen 165 RGLFYGPRFRGIESIRRGEALAEVRLPDDPASDPDPFVLHPALLDAALQAAGLALWEDDDRGRVFLPVSIERIRIFRAPP 244 (295)
T ss_dssp TTEEEHGGGHHEEEEEESEEEEEEECGTTTGGGGGGSSS-HHHHHHHHHGHGCCHTSTTTTTSEEEEEEEEEEEESSS--
T ss_pred cCCccCCcccchhhhhhccceEEEEEEeeccCCCCceeECHHHHHHHHHHHHHHhccccCCCCEEcccEeCEEEEEeccC
Confidence 9999999999999998888889999998887 799999996522 24678899999999999994 1
Q ss_pred -hh---Hhhhh--ccCCCCCeeeEEEecccCcEEeccEEEeceeeeccCCC
Q psy1119 234 -DH---VNLLS--TLDEETPEYPVFVYKEVEVIKSGGVEIRGLKASAIPRK 278 (1392)
Q Consensus 234 -~h---~~~~~--~~~~~~~~~~v~~~~~~~~~~~ggvei~gl~~~~~~rr 278 (1392)
.. ..++. +.+++.-..+|.++..-+.+. ++++|+....++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~dv~v~d~~G~~~---~~~~gl~~~~~~~~ 292 (295)
T PF14765_consen 245 PPGDRLYVYARLVKSDDDTITGDVTVFDEDGRVV---AELEGLTFRRVPSA 292 (295)
T ss_dssp SSTSEEEEEEEEESTTTTEEEEEEEEEETTSBEE---EEEEEEEEEEEEHH
T ss_pred CCCCEEEEEEEEecccceEEEEEEEEECCCCCEE---EEEccEEEEECCcc
Confidence 11 11111 111222355666655444443 57777777666554
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.6e-11 Score=145.20 Aligned_cols=170 Identities=13% Similarity=0.139 Sum_probs=125.7
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
+.++++|||||+|+||.++++.|+++|++ |++++|+......... .......+.++.++.+|+++.++++++++
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 76 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGYT-INATVRDPKDRKKTDH-LLALDGAKERLKLFKADLLDEGSFELAID---- 76 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCE-EEEEEcCCcchhhHHH-HHhccCCCCceEEEeCCCCCchHHHHHHc----
Confidence 45789999999999999999999999997 7777777543222111 11111112467888999999999888775
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC-----------
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG----------- 927 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g----------- 927 (1392)
.+|.|||+|+... ...+.+.|...+++|+.|++++.+++.+.+ ..+.||++||+++..+...
T Consensus 77 --~~d~vih~A~~~~----~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~-~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~ 149 (325)
T PLN02989 77 --GCETVFHTASPVA----ITVKTDPQVELINPAVNGTINVLRTCTKVS-SVKRVILTSSMAAVLAPETKLGPNDVVDET 149 (325)
T ss_pred --CCCEEEEeCCCCC----CCCCCChHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEecchhheecCCccCCCCCccCcC
Confidence 4899999999642 133455688999999999999999876542 3468999999877654310
Q ss_pred -----------ChhHHHHHHHHHHHHHHH-HHcCCCeEEEEccccC
Q psy1119 928 -----------QTNYGMANSIMERICEAR-RAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 928 -----------q~~Yaaana~ld~la~~r-~~~Glp~~ai~~g~~~ 961 (1392)
.+.|+++|.+.+.++... +..|++...+..+.+-
T Consensus 150 ~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vy 195 (325)
T PLN02989 150 FFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVT 195 (325)
T ss_pred CCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCcee
Confidence 246999999999998654 4458998888777653
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.9e-11 Score=141.79 Aligned_cols=162 Identities=19% Similarity=0.225 Sum_probs=121.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhC-CceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRG-ARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~G-Ar~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
.++++|||||+|+||.++++.|+++| ..+|++++|+... .....+.+. +.++.++.+|++|.+++.++++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~---~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~---- 73 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELK---QWEMQQKFP--APCLRFFIGDVRDKERLTRALR---- 73 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhH---HHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh----
Confidence 46899999999999999999999997 3458888887422 111222222 2457789999999999887764
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
.+|+|||+||.... +..+.++ ...+++|+.|++++.+++... ..+.||++||..... ..+.|+++|++.
T Consensus 74 --~iD~Vih~Ag~~~~-~~~~~~~---~~~~~~Nv~g~~~ll~aa~~~--~~~~iV~~SS~~~~~---p~~~Y~~sK~~~ 142 (324)
T TIGR03589 74 --GVDYVVHAAALKQV-PAAEYNP---FECIRTNINGAQNVIDAAIDN--GVKRVVALSTDKAAN---PINLYGATKLAS 142 (324)
T ss_pred --cCCEEEECcccCCC-chhhcCH---HHHHHHHHHHHHHHHHHHHHc--CCCEEEEEeCCCCCC---CCCHHHHHHHHH
Confidence 48999999997532 3333333 468999999999999988653 457899999976543 357799999999
Q ss_pred HHHHHHH----HHcCCCeEEEEccccC
Q psy1119 939 ERICEAR----RAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 939 d~la~~r----~~~Glp~~ai~~g~~~ 961 (1392)
+.+++.. +..|++..++..|.+-
T Consensus 143 E~l~~~~~~~~~~~gi~~~~lR~g~v~ 169 (324)
T TIGR03589 143 DKLFVAANNISGSKGTRFSVVRYGNVV 169 (324)
T ss_pred HHHHHHHHhhccccCcEEEEEeeccee
Confidence 9998753 2458888888888764
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.32 E-value=6.9e-11 Score=125.08 Aligned_cols=177 Identities=18% Similarity=0.225 Sum_probs=145.7
Q ss_pred cCCCCeEEEEcC--cchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHh-cCCceEEEEeccCCCHHHHHHHHH
Q psy1119 778 ADSNKSYIICGG--LGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK-SYDVQVLISTDDITTEAGVVNLLT 854 (1392)
Q Consensus 778 ~~~~~~ylItGG--~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~-~~G~~v~~~~~Dv~~~~~v~~l~~ 854 (1392)
+..+|++||+|= -..|+..+|+.|.++||+ ++++.... ..+..++++. ..|. ..++.|||++.+++.++++
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAe-L~fTy~~e----~l~krv~~la~~~~s-~~v~~cDV~~d~~i~~~f~ 76 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAE-LAFTYQGE----RLEKRVEELAEELGS-DLVLPCDVTNDESIDALFA 76 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCE-EEEEeccH----HHHHHHHHHHhhccC-CeEEecCCCCHHHHHHHHH
Confidence 467899999994 468999999999999998 88887663 2333344433 3343 5678999999999999999
Q ss_pred HH-hhcCCccEEEECcccCC----CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCCh
Q psy1119 855 EA-NKLGPVDGIFNLAVVLK----DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQT 929 (1392)
Q Consensus 855 ~~-~~~g~I~gvi~~Agv~~----d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~ 929 (1392)
++ +++|.+|+++|+-+... ++.+.+.|.|.|...+..-......|.++++++|.+.+.+|.++=..+.+.-|+.-
T Consensus 77 ~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnYN 156 (259)
T COG0623 77 TIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYN 156 (259)
T ss_pred HHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCCc
Confidence 99 67999999999988754 46788899999999999999998889999999999999999999988888778777
Q ss_pred hHHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 930 NYGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
.-+.||++|++-++|.+.+ |..+-+|.-||+
T Consensus 157 vMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPI 191 (259)
T COG0623 157 VMGVAKAALEASVRYLAADLGKEGIRVNAISAGPI 191 (259)
T ss_pred hhHHHHHHHHHHHHHHHHHhCccCeEEeeecccch
Confidence 8899999999999998876 444455555554
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.6e-11 Score=142.85 Aligned_cols=170 Identities=18% Similarity=0.159 Sum_probs=126.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
.+++++|||||+|+||.++|+.|+++|++ |+.++|+........ ..+. .+.++..+.+|+++.+++.++++..
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~---~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-- 74 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAE-VYGYSLDPPTSPNLF---ELLN-LAKKIEDHFGDIRDAAKLRKAIAEF-- 74 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCE-EEEEeCCCccchhHH---HHHh-hcCCceEEEccCCCHHHHHHHHhhc--
Confidence 35789999999999999999999999997 777788754332221 1221 2335667899999999999888764
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc------------CCC
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR------------GNA 926 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~------------G~~ 926 (1392)
.+|.|||+|+.. ....+.+++...++.|+.|+.++.+++... ...+.||++||.+..- ...
T Consensus 75 --~~d~vih~A~~~----~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~ 147 (349)
T TIGR02622 75 --KPEIVFHLAAQP----LVRKSYADPLETFETNVMGTVNLLEAIRAI-GSVKAVVNVTSDKCYRNDEWVWGYRETDPLG 147 (349)
T ss_pred --CCCEEEECCccc----ccccchhCHHHHHHHhHHHHHHHHHHHHhc-CCCCEEEEEechhhhCCCCCCCCCccCCCCC
Confidence 589999999853 224456778889999999999998887643 2246899999975321 113
Q ss_pred CChhHHHHHHHHHHHHHHHHHc--------CCCeEEEEccccCc
Q psy1119 927 GQTNYGMANSIMERICEARRAE--------GLPGLAVEWGAVGE 962 (1392)
Q Consensus 927 gq~~Yaaana~ld~la~~r~~~--------Glp~~ai~~g~~~~ 962 (1392)
+...|+++|.+++.+++..+.+ |++...+-.+.+-+
T Consensus 148 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyG 191 (349)
T TIGR02622 148 GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIG 191 (349)
T ss_pred CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccC
Confidence 4578999999999999865432 78888888776643
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.1e-11 Score=136.91 Aligned_cols=178 Identities=16% Similarity=0.093 Sum_probs=128.3
Q ss_pred CCCCeEEEEcCcchHHHH--HHHHHHHhCCceEEEecCCCcccH---------HHHHHHHHHhcCCceEEEEeccCCCHH
Q psy1119 779 DSNKSYIICGGLGGFGLE--LADWLVLRGARKLVLTSRSGVKNG---------YQALRIKIWKSYDVQVLISTDDITTEA 847 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~--lA~~La~~GAr~lvl~sRs~~~~~---------~~~~~~~~l~~~G~~v~~~~~Dv~~~~ 847 (1392)
..+|++|||||++|||++ +|+.| ++||+ ++++++...... ..+...+.++..|..+..+.||+++.+
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~-Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGAD-TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCe-EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 456899999999999999 89999 99998 455554221111 112233445566888888999999999
Q ss_pred HHHHHHHHH-hhcCCccEEEECcccCCCc----------------------------------cccCCCHHHHHHHHhhH
Q psy1119 848 GVVNLLTEA-NKLGPVDGIFNLAVVLKDA----------------------------------LFENQTPEDFNASLGPK 892 (1392)
Q Consensus 848 ~v~~l~~~~-~~~g~I~gvi~~Agv~~d~----------------------------------~~~~~t~e~~~~~~~~k 892 (1392)
+++++++.+ +.+|+||+||||++..... .+..++.++++.++ |
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv--~ 194 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTV--K 194 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHH--H
Confidence 999999998 6799999999999876321 12246666766655 5
Q ss_pred hHHH--HHH---HHHHhhhCCCCCeEEEecccccccCCCCC--hhHHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 893 ANAT--KYF---DKYSRTMCPTLGQFVVFSSVSCGRGNAGQ--TNYGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 893 v~g~--~~L---~~~~~~~~~~l~~fV~~SS~s~~~G~~gq--~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
|+|. |.+ .....+++.+...+|.+|++.+-...|.. ..-++||+.|++-+++.+.+ |..+.++..|++
T Consensus 195 vMggedw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~ 273 (398)
T PRK13656 195 VMGGEDWELWIDALDEAGVLAEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAV 273 (398)
T ss_pred hhccchHHHHHHHHHhcccccCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcc
Confidence 6666 222 23335556677899999998776554433 56689999999999998876 455666666665
|
|
| >KOG1204|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.1e-11 Score=128.89 Aligned_cols=176 Identities=16% Similarity=0.091 Sum_probs=129.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
..++.|+||++.|||..++..+.+++-..+ ..+++....+ ........|........|++....+.++++.. .+
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~-r~g~~r~~a~----~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k 79 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEAL-RYGVARLLAE----LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKK 79 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHH-HHhhhccccc----ccceEEEecCCcceechHHHHHHHHHHHHhhhhhc
Confidence 467899999999999888877777765422 2222211111 01111223323334567788888888888877 56
Q ss_pred cCCccEEEECcccCCCcc---ccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC---CCeEEEecccccccCCCCChhHH
Q psy1119 859 LGPVDGIFNLAVVLKDAL---FENQTPEDFNASLGPKANATKYFDKYSRTMCPT---LGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~---~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~---l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
.|..++||||||.+.|-. .+..+.++|++-++.|+.+..-|...+.+..++ .+.+|++||.+++.+..+++.||
T Consensus 80 ~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc 159 (253)
T KOG1204|consen 80 GGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYC 159 (253)
T ss_pred CCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhh
Confidence 889999999999998854 246788999999999999999987766554433 38899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcC---CCeEEEEcccc
Q psy1119 933 MANSIMERICEARRAEG---LPGLAVEWGAV 960 (1392)
Q Consensus 933 aana~ld~la~~r~~~G---lp~~ai~~g~~ 960 (1392)
++|++.+.|.+..+.+- ..++++..|.+
T Consensus 160 ~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvv 190 (253)
T KOG1204|consen 160 SSKAARNMYFMVLASEEPFDVRVLNYAPGVV 190 (253)
T ss_pred hhHHHHHHHHHHHhhcCccceeEEEccCCcc
Confidence 99999999999998875 34455555443
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.1e-10 Score=139.29 Aligned_cols=177 Identities=14% Similarity=0.109 Sum_probs=126.7
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecC---CCcccH----------HHHHHHHHHh-cCCceEEEEeccC
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSR---SGVKNG----------YQALRIKIWK-SYDVQVLISTDDI 843 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sR---s~~~~~----------~~~~~~~~l~-~~G~~v~~~~~Dv 843 (1392)
...++++|||||+|.||..+++.|+++|++ |++++| +..... .....++.+. ..+.++.++.+|+
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 122 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYE-VAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI 122 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence 346789999999999999999999999997 666543 211100 0011112121 1234577889999
Q ss_pred CCHHHHHHHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCC-CeEEEecccccc
Q psy1119 844 TTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTL-GQFVVFSSVSCG 922 (1392)
Q Consensus 844 ~~~~~v~~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l-~~fV~~SS~s~~ 922 (1392)
+|.+.+.++++.. .+|.|||+|+... ......+.+++...++.|+.|+.++.++++.. .. .+||++||.+.
T Consensus 123 ~d~~~v~~~l~~~----~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~--gv~~~~V~~SS~~v- 194 (442)
T PLN02572 123 CDFEFLSEAFKSF----EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF--APDCHLVKLGTMGE- 194 (442)
T ss_pred CCHHHHHHHHHhC----CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh--CCCccEEEEeccee-
Confidence 9999999888763 6899999997532 34455566778888999999999999888654 22 48999999753
Q ss_pred cCCC-------------------------CChhHHHHHHHHHHHHHHHH-HcCCCeEEEEccccCcc
Q psy1119 923 RGNA-------------------------GQTNYGMANSIMERICEARR-AEGLPGLAVEWGAVGEV 963 (1392)
Q Consensus 923 ~G~~-------------------------gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~~~~ 963 (1392)
.|.+ ....|+.+|.+.+.+++..+ ..|++.+.+..+.+-+.
T Consensus 195 YG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp 261 (442)
T PLN02572 195 YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGV 261 (442)
T ss_pred cCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCC
Confidence 2321 13579999999999997754 45999998888776443
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.1e-10 Score=135.24 Aligned_cols=163 Identities=15% Similarity=0.176 Sum_probs=123.5
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
++++++||||+|.||..+++.|+++|.+ |+.+.|+..... ......+...+.++.++.+|+++.+++.++++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~-V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 80 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYT-VKGTVRNPDDPK--NTHLRELEGGKERLILCKADLQDYEALKAAID----- 80 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEeCCchhhh--HHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-----
Confidence 4678999999999999999999999997 777788743211 11122333223357788999999998887765
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC-------------
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA------------- 926 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~------------- 926 (1392)
.+|.|||+|+... +++...+++|+.|+.++.+++... ..+.||++||.++..|.+
T Consensus 81 -~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~~~--~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~ 148 (342)
T PLN02214 81 -GCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAAEA--KVKRVVITSSIGAVYMDPNRDPEAVVDESCW 148 (342)
T ss_pred -cCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeccceeeeccCCCCCCcccCcccC
Confidence 4899999998642 245678999999999999887653 456899999987665421
Q ss_pred --------CChhHHHHHHHHHHHHHHH-HHcCCCeEEEEccccCc
Q psy1119 927 --------GQTNYGMANSIMERICEAR-RAEGLPGLAVEWGAVGE 962 (1392)
Q Consensus 927 --------gq~~Yaaana~ld~la~~r-~~~Glp~~ai~~g~~~~ 962 (1392)
..+.|+++|...+.++... +..|++.+.+..+.+-+
T Consensus 149 ~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyG 193 (342)
T PLN02214 149 SDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLG 193 (342)
T ss_pred CChhhccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceEC
Confidence 1246999999999999765 45599999998887643
|
|
| >PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.1e-11 Score=125.35 Aligned_cols=124 Identities=27% Similarity=0.449 Sum_probs=82.3
Q ss_pred CCcCceeeCCCccHHHHHHHHcCCCcceEEEecCc--hhHH-HHHHhcccCCeEEEEEcccccccCccccccccCCCcEE
Q psy1119 613 IKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLA--EEKL-QASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSF 689 (1392)
Q Consensus 613 l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~--~~~l-~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~ 689 (1392)
||+++++|+++.++ +.+.|+|+|||+++ ++.+ ..+++|| ++|++|.+|. .. .......+...+
T Consensus 1 LGAd~vidy~~~~~-------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-~~-----~~~~~~~~~~~~ 66 (127)
T PF13602_consen 1 LGADEVIDYRDTDF-------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-DL-----PSFARRLKGRSI 66 (127)
T ss_dssp CT-SEEEETTCSHH-------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-HH-----HHHHHHHHCHHC
T ss_pred CCcCEEecCCCccc-------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-cc-----cchhhhhcccce
Confidence 58999999998777 55679999999999 7655 7888999 9999999984 10 011111222333
Q ss_pred EEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEE
Q psy1119 690 HGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752 (1392)
Q Consensus 690 ~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI 752 (1392)
....+..+... +...+.++.+.+++++|+++|.+.++||++++.+|++.++++++.||+||
T Consensus 67 ~~~~~~~~~~~--~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 67 RYSFLFSVDPN--AIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp EEECCC-H--H--HHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred EEEEEEecCCC--chHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 33322211000 22445567778899999999999999999999999999999999999986
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.8e-10 Score=135.21 Aligned_cols=169 Identities=20% Similarity=0.246 Sum_probs=123.4
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.++++|||||+|.||..+++.|+++|++ |++++|+... .......+.. +.++.++.+|+++.+++.++++
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~-V~~~~r~~~~---~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~----- 78 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYT-VHATLRDPAK---SLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK----- 78 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCChHH---HHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc-----
Confidence 4678999999999999999999999997 7767786422 2222333332 4578889999999998887764
Q ss_pred CCccEEEECcccCCCcc-ccCCCHHHH--HHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC----------
Q psy1119 860 GPVDGIFNLAVVLKDAL-FENQTPEDF--NASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA---------- 926 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~-~~~~t~e~~--~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~---------- 926 (1392)
.+|+|||+|+...... ....+.+.+ ..++++++.|+.+|.+++.+. ...+.||++||.+...+.+
T Consensus 79 -~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~~~ 156 (353)
T PLN02896 79 -GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS-KTVKRVVFTSSISTLTAKDSNGRWRAVVD 156 (353)
T ss_pred -CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc-CCccEEEEEechhhccccccCCCCCCccC
Confidence 4799999999764432 223344444 467888999999998887653 1246899999986543211
Q ss_pred ---------------CChhHHHHHHHHHHHHHHHHH-cCCCeEEEEcccc
Q psy1119 927 ---------------GQTNYGMANSIMERICEARRA-EGLPGLAVEWGAV 960 (1392)
Q Consensus 927 ---------------gq~~Yaaana~ld~la~~r~~-~Glp~~ai~~g~~ 960 (1392)
..+.|+.+|.+.+.++..... .|++...+..+.+
T Consensus 157 E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v 206 (353)
T PLN02896 157 ETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTV 206 (353)
T ss_pred cccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcc
Confidence 123799999999999887554 5899888887655
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.6e-10 Score=131.12 Aligned_cols=168 Identities=15% Similarity=0.095 Sum_probs=121.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
+++++++||||+|+||.++++.|+++|.+ |+++.|+..... ....+..+...+.++.++.+|++|.+++.+++.
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~-V~~~~R~~~~~~-~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~---- 77 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYT-VHAAVQKNGETE-IEKEIRGLSCEEERLKVFDVDPLDYHSILDALK---- 77 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCE-EEEEEcCchhhh-HHHHHHhcccCCCceEEEEecCCCHHHHHHHHc----
Confidence 45689999999999999999999999997 777778632211 112223332224467788899999998876553
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC-C--C--------
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN-A--G-------- 927 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~-~--g-------- 927 (1392)
..++|+|.++...+ .+ ++++..+++++.|+.++.+++.+.+ ..+.||++||+++.... . +
T Consensus 78 --~~d~v~~~~~~~~~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~-~v~riV~~SS~~a~~~~~~~~~~~~~~~E~ 148 (297)
T PLN02583 78 --GCSGLFCCFDPPSD-----YP-SYDEKMVDVEVRAAHNVLEACAQTD-TIEKVVFTSSLTAVIWRDDNISTQKDVDER 148 (297)
T ss_pred --CCCEEEEeCccCCc-----cc-ccHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEecchHheecccccCCCCCCCCcc
Confidence 47899998754322 11 2467899999999999999886542 34799999999875421 1 1
Q ss_pred -----------ChhHHHHHHHHHHHHHHH-HHcCCCeEEEEccccC
Q psy1119 928 -----------QTNYGMANSIMERICEAR-RAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 928 -----------q~~Yaaana~ld~la~~r-~~~Glp~~ai~~g~~~ 961 (1392)
.+.|+.+|...+.++... +..|++.+++..+.+-
T Consensus 149 ~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~ 194 (297)
T PLN02583 149 SWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLM 194 (297)
T ss_pred cCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCccc
Confidence 015999999999998643 3469999999988763
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.8e-10 Score=138.14 Aligned_cols=163 Identities=17% Similarity=0.125 Sum_probs=115.6
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-----CC----ceEEEEeccCCCHHH
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-----YD----VQVLISTDDITTEAG 848 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-----~G----~~v~~~~~Dv~~~~~ 848 (1392)
...+++++||||+||||+++++.|+++|++ |+++.|+..... ...+.++. .| .++.++.+|+++.++
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~-Vval~Rn~ekl~---~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es 152 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSAQRAE---SLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ 152 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCe-EEEEeCCHHHHH---HHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence 456789999999999999999999999997 777788753322 22222211 23 247889999999998
Q ss_pred HHHHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccc-cCCCC
Q psy1119 849 VVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCG-RGNAG 927 (1392)
Q Consensus 849 v~~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~-~G~~g 927 (1392)
++++ ++.+|+||||||.... ...+|...++.++.|+.++.+++... ..++||++||+++. .+.++
T Consensus 153 I~~a------LggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~~a--gVgRIV~VSSiga~~~g~p~ 218 (576)
T PLN03209 153 IGPA------LGNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAATVA--KVNHFILVTSLGTNKVGFPA 218 (576)
T ss_pred HHHH------hcCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHHHh--CCCEEEEEccchhcccCccc
Confidence 7653 4679999999997542 12247788899999999999887653 46799999998764 34333
Q ss_pred ChhHHHHHHHH----HHHHHHHHHcCCCeEEEEcccc
Q psy1119 928 QTNYGMANSIM----ERICEARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 928 q~~Yaaana~l----d~la~~r~~~Glp~~ai~~g~~ 960 (1392)
. .|. +++++ ..+.+..+..|++...|..|.+
T Consensus 219 ~-~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L 253 (576)
T PLN03209 219 A-ILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGM 253 (576)
T ss_pred c-chh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCee
Confidence 2 132 22222 2333444567999988988865
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.3e-10 Score=131.56 Aligned_cols=139 Identities=17% Similarity=0.109 Sum_probs=110.7
Q ss_pred HHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCccEEEECcccCCCcc
Q psy1119 797 LADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDAL 876 (1392)
Q Consensus 797 lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~gvi~~Agv~~d~~ 876 (1392)
+|+.|+++|++ |++++|+.... . . ..+++||+++.++++++++++. ++||+||||||+...
T Consensus 1 ~a~~l~~~G~~-Vv~~~r~~~~~----~----~------~~~~~~Dl~~~~~v~~~~~~~~--~~iD~li~nAG~~~~-- 61 (241)
T PRK12428 1 TARLLRFLGAR-VIGVDRREPGM----T----L------DGFIQADLGDPASIDAAVAALP--GRIDALFNIAGVPGT-- 61 (241)
T ss_pred ChHHHHhCCCE-EEEEeCCcchh----h----h------hHhhcccCCCHHHHHHHHHHhc--CCCeEEEECCCCCCC--
Confidence 47899999996 88888875321 0 0 2347899999999999998764 689999999997532
Q ss_pred ccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccc---------------------------cCCCCCh
Q psy1119 877 FENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCG---------------------------RGNAGQT 929 (1392)
Q Consensus 877 ~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~---------------------------~G~~gq~ 929 (1392)
+.|+++++.|+.|++++.+++.+.+.+.+.||++||.++. .+.++.+
T Consensus 62 ------~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (241)
T PRK12428 62 ------APVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALAT 135 (241)
T ss_pred ------CCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCccc
Confidence 3588999999999999999887765555899999999886 3567889
Q ss_pred hHHHHHHHHHHHHHHHH-Hc----CCCeEEEEcccc
Q psy1119 930 NYGMANSIMERICEARR-AE----GLPGLAVEWGAV 960 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~-~~----Glp~~ai~~g~~ 960 (1392)
.|+++|+++++|++.++ .+ |..+.+|..|.+
T Consensus 136 ~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v 171 (241)
T PRK12428 136 GYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPV 171 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCc
Confidence 99999999999999887 43 555666766655
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.5e-10 Score=134.80 Aligned_cols=162 Identities=16% Similarity=0.092 Sum_probs=114.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCccc--HHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKN--GYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~--~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
+++++|||||+|+||.++++.|+++|++ |+++.|+.... ...+.........+.++..+.+|++|.+++.++++..
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 82 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYE-VHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI- 82 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCE-EEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc-
Confidence 4578999999999999999999999997 77777764221 1111111111122456888999999999999988764
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCC---CeEEEecccccccCCC--------
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTL---GQFVVFSSVSCGRGNA-------- 926 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l---~~fV~~SS~s~~~G~~-------- 926 (1392)
.+|.|||+|+..... .+.++....++.|+.|+.++.+++.+..... -.||++||.+ ..|..
T Consensus 83 ---~~d~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~-vyg~~~~~~~E~~ 154 (340)
T PLN02653 83 ---KPDEVYNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSE-MYGSTPPPQSETT 154 (340)
T ss_pred ---CCCEEEECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHH-HhCCCCCCCCCCC
Confidence 589999999975422 2234456777889999999998886653221 2788888753 33431
Q ss_pred ---CChhHHHHHHHHHHHHHHHHHc-CCC
Q psy1119 927 ---GQTNYGMANSIMERICEARRAE-GLP 951 (1392)
Q Consensus 927 ---gq~~Yaaana~ld~la~~r~~~-Glp 951 (1392)
..+.|+++|.+.+.+++..+.+ |++
T Consensus 155 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~ 183 (340)
T PLN02653 155 PFHPRSPYAVAKVAAHWYTVNYREAYGLF 183 (340)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHcCCe
Confidence 2567999999999999875544 665
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.17 E-value=8.3e-10 Score=132.16 Aligned_cols=167 Identities=14% Similarity=0.170 Sum_probs=121.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHH-hcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIW-KSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l-~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
.+++++||||+|++|.+++++|+++|.+ |++++|+..........+... ...+.++..+.+|+++++++.++++..
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-- 80 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLAGYK-VVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-- 80 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC--
Confidence 4578999999999999999999999986 777776543222211122222 122445778899999999998887652
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC------------
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA------------ 926 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~------------ 926 (1392)
.+|.|||+|+..... .+.+++.+.++.|+.++.+|.+++... ....||++||. +..|..
T Consensus 81 --~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~-~vyg~~~~~~~~E~~~~~ 151 (352)
T PLN02240 81 --RFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVMAKH--GCKKLVFSSSA-TVYGQPEEVPCTEEFPLS 151 (352)
T ss_pred --CCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEccH-HHhCCCCCCCCCCCCCCC
Confidence 789999999865321 233567789999999999998877543 45689999995 334422
Q ss_pred CChhHHHHHHHHHHHHHHHHH--cCCCeEEEEcc
Q psy1119 927 GQTNYGMANSIMERICEARRA--EGLPGLAVEWG 958 (1392)
Q Consensus 927 gq~~Yaaana~ld~la~~r~~--~Glp~~ai~~g 958 (1392)
+...|+++|.+.+.+++.... .+++.+.+.++
T Consensus 152 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~ 185 (352)
T PLN02240 152 ATNPYGRTKLFIEEICRDIHASDPEWKIILLRYF 185 (352)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeec
Confidence 356899999999999986543 35777766654
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=7.3e-10 Score=131.94 Aligned_cols=165 Identities=16% Similarity=0.170 Sum_probs=118.5
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
+++++||||+|.||..++++|+++|++ |+++.|+........ ....+...+ ++.++.+|++|.+++.++++
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~-~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~------ 79 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGYA-VNTTVRDPENQKKIA-HLRALQELG-DLKIFGADLTDEESFEAPIA------ 79 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCCE-EEEEECCCCCHHHHH-HHHhcCCCC-ceEEEEcCCCChHHHHHHHh------
Confidence 578999999999999999999999996 766777643222111 111222222 57788999999998887664
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC---------------
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN--------------- 925 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~--------------- 925 (1392)
.+|.|||+|+... ... .+.+...+++|+.|+.++.+++.... ..+.||++||.+..-+.
T Consensus 80 ~~d~vih~A~~~~---~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~-~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~ 153 (338)
T PLN00198 80 GCDLVFHVATPVN---FAS--EDPENDMIKPAIQGVHNVLKACAKAK-SVKRVILTSSAAAVSINKLSGTGLVMNEKNWT 153 (338)
T ss_pred cCCEEEEeCCCCc---cCC--CChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeecceeeeccCCCCCCceeccccCC
Confidence 5799999998532 111 23345678899999999998876532 34689999998654311
Q ss_pred ---------CCChhHHHHHHHHHHHHHHHH-HcCCCeEEEEcccc
Q psy1119 926 ---------AGQTNYGMANSIMERICEARR-AEGLPGLAVEWGAV 960 (1392)
Q Consensus 926 ---------~gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~ 960 (1392)
+....|+.+|.+.+.+++... ..|++.+.+..+.+
T Consensus 154 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~v 198 (338)
T PLN00198 154 DVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLM 198 (338)
T ss_pred chhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCce
Confidence 124569999999999998644 45899888876655
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.14 E-value=7.1e-10 Score=131.09 Aligned_cols=168 Identities=14% Similarity=0.151 Sum_probs=120.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.+++++||||+|.||.++++.|+++|.+ |+.+.|+........... .......++.++.+|+++.+++.++++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYT-VKATVRDLTDRKKTEHLL-ALDGAKERLKLFKADLLEESSFEQAIE----- 76 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEECCCcchHHHHHHH-hccCCCCceEEEecCCCCcchHHHHHh-----
Confidence 4689999999999999999999999997 777778754322211111 111112357788999999998887775
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc-CCC------------
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR-GNA------------ 926 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~-G~~------------ 926 (1392)
.+|+|||+|+..... . .+.+...+++++.|+.++.+++... .....||++||.++.. +.+
T Consensus 77 -~~d~vih~A~~~~~~----~-~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~ 149 (322)
T PLN02986 77 -GCDAVFHTASPVFFT----V-KDPQTELIDPALKGTINVLNTCKET-PSVKRVILTSSTAAVLFRQPPIEANDVVDETF 149 (322)
T ss_pred -CCCEEEEeCCCcCCC----C-CCchhhhhHHHHHHHHHHHHHHHhc-CCccEEEEecchhheecCCccCCCCCCcCccc
Confidence 489999999864221 1 1234567899999999999887643 2356899999987642 221
Q ss_pred ---------CChhHHHHHHHHHHHHHHH-HHcCCCeEEEEccccC
Q psy1119 927 ---------GQTNYGMANSIMERICEAR-RAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 927 ---------gq~~Yaaana~ld~la~~r-~~~Glp~~ai~~g~~~ 961 (1392)
..+.|+++|...+.++... ++.|++.+.+..+.+-
T Consensus 150 ~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~ 194 (322)
T PLN02986 150 FSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFIC 194 (322)
T ss_pred CCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEccccee
Confidence 1356999999999888754 4458998888877653
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.1e-09 Score=131.43 Aligned_cols=168 Identities=17% Similarity=0.199 Sum_probs=121.7
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
+++|||||+|.||.++++.|.++|...+++..|.... .... .+..+ ..+.++.++.+|++|.++++++++. ..
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~~-~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~----~~ 74 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNLM-SLAPV-AQSERFAFEKVDICDRAELARVFTE----HQ 74 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cchh-hhhhc-ccCCceEEEECCCcChHHHHHHHhh----cC
Confidence 4799999999999999999999998756565554211 1111 11111 1234577789999999999888875 26
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-------CCCCeEEEeccccccc-----------
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC-------PTLGQFVVFSSVSCGR----------- 923 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-------~~l~~fV~~SS~s~~~----------- 923 (1392)
+|.|||+|+.... ..+.+++...++.|+.|+.++.+++.+.+ .....||++||.+..-
T Consensus 75 ~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E 150 (355)
T PRK10217 75 PDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTE 150 (355)
T ss_pred CCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCC
Confidence 8999999986432 33456788999999999999999886532 1235899999865321
Q ss_pred --CCCCChhHHHHHHHHHHHHHHH-HHcCCCeEEEEcccc
Q psy1119 924 --GNAGQTNYGMANSIMERICEAR-RAEGLPGLAVEWGAV 960 (1392)
Q Consensus 924 --G~~gq~~Yaaana~ld~la~~r-~~~Glp~~ai~~g~~ 960 (1392)
...+.+.|+.+|.+.+.+++.. +..|++.+.+..+.+
T Consensus 151 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v 190 (355)
T PRK10217 151 TTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNN 190 (355)
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeee
Confidence 1124568999999999999875 456999888877654
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.4e-09 Score=130.15 Aligned_cols=165 Identities=17% Similarity=0.145 Sum_probs=118.5
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCC--ceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYD--VQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G--~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
..+++|||||+|.||..+++.|+++|.+ |+++.|+......... .....+ .++.++.+|+++.+.+.++++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~-V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~--- 76 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYT-VRATVRDPANVKKVKH---LLDLPGATTRLTLWKADLAVEGSFDDAIR--- 76 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCE-EEEEEcCcchhHHHHH---HHhccCCCCceEEEEecCCChhhHHHHHh---
Confidence 4578999999999999999999999997 7767776433222211 111112 357788999999998887765
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC----C-------
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN----A------- 926 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~----~------- 926 (1392)
.+|.|||+|+.... .. .+.+...+++|+.|+.+|.+++.+.. ....||++||.+...+. +
T Consensus 77 ---~~d~ViH~A~~~~~---~~--~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~r~v~~SS~~~~~~~~~~~~~~~E~~~ 147 (351)
T PLN02650 77 ---GCTGVFHVATPMDF---ES--KDPENEVIKPTVNGMLSIMKACAKAK-TVRRIVFTSSAGTVNVEEHQKPVYDEDCW 147 (351)
T ss_pred ---CCCEEEEeCCCCCC---CC--CCchhhhhhHHHHHHHHHHHHHHhcC-CceEEEEecchhhcccCCCCCCccCcccC
Confidence 47999999985421 11 12345678899999999999886531 24689999998544321 1
Q ss_pred -----------CChhHHHHHHHHHHHHHHHH-HcCCCeEEEEcccc
Q psy1119 927 -----------GQTNYGMANSIMERICEARR-AEGLPGLAVEWGAV 960 (1392)
Q Consensus 927 -----------gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~ 960 (1392)
..+.|+.+|.+.+.+++... ..|++...+..+.+
T Consensus 148 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v 193 (351)
T PLN02650 148 SDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLV 193 (351)
T ss_pred CchhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCce
Confidence 12379999999999997654 45999888877754
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.5e-09 Score=129.53 Aligned_cols=162 Identities=19% Similarity=0.107 Sum_probs=112.7
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCccc--HHHHHHHHHH-hcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKN--GYQALRIKIW-KSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~--~~~~~~~~~l-~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
+++|||||+|.||..+++.|+++|++ |+.+.|+.... .......+.. ...+..+..+.+|++|.+++.++++..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-- 77 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYE-VHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI-- 77 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCE-EEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC--
Confidence 57999999999999999999999997 77777774321 1111111111 111345778899999999999888764
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-CCCCeEEEecccccccCC------------
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC-PTLGQFVVFSSVSCGRGN------------ 925 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~~l~~fV~~SS~s~~~G~------------ 925 (1392)
++|.|||+|+...... +.+.-...++.++.|+.++.+++.... .....||++||.+. .|.
T Consensus 78 --~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~v-yg~~~~~~~~E~~~~ 150 (343)
T TIGR01472 78 --KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSEL-YGKVQEIPQNETTPF 150 (343)
T ss_pred --CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHh-hCCCCCCCCCCCCCC
Confidence 5799999999754321 112224566778999999998886532 12237899998643 231
Q ss_pred CCChhHHHHHHHHHHHHHHHHH-cCCCeE
Q psy1119 926 AGQTNYGMANSIMERICEARRA-EGLPGL 953 (1392)
Q Consensus 926 ~gq~~Yaaana~ld~la~~r~~-~Glp~~ 953 (1392)
...+.|+++|.+.+.+++..+. .|+++.
T Consensus 151 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 179 (343)
T TIGR01472 151 YPRSPYAAAKLYAHWITVNYREAYGLFAV 179 (343)
T ss_pred CCCChhHHHHHHHHHHHHHHHHHhCCceE
Confidence 1456899999999999987554 477754
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.1e-09 Score=126.92 Aligned_cols=168 Identities=17% Similarity=0.209 Sum_probs=131.6
Q ss_pred ccCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC--CceEEEEeccCCCHHHHHHHHH
Q psy1119 777 YADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY--DVQVLISTDDITTEAGVVNLLT 854 (1392)
Q Consensus 777 ~~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~--G~~v~~~~~Dv~~~~~v~~l~~ 854 (1392)
.+..+|+.+||||+|.||.++++.+++.+.++|++.+|+.-. +-..-.+++.. -.+...+-+||.|.+.+.++++
T Consensus 246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~---~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~ 322 (588)
T COG1086 246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYK---LYLIDMELREKFPELKLRFYIGDVRDRDRVERAME 322 (588)
T ss_pred hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHH---HHHHHHHHHhhCCCcceEEEecccccHHHHHHHHh
Confidence 356899999999999999999999999999999999998532 22223344432 3678888999999999998887
Q ss_pred HHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHH
Q psy1119 855 EANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 855 ~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
.. ++|.|||+|.. ..-|+-+.. ..+.+..|+.||.|+.+++... ....||++|+--+..+. ..|+|+
T Consensus 323 ~~----kvd~VfHAAA~-KHVPl~E~n---P~Eai~tNV~GT~nv~~aa~~~--~V~~~V~iSTDKAV~Pt---NvmGaT 389 (588)
T COG1086 323 GH----KVDIVFHAAAL-KHVPLVEYN---PEEAIKTNVLGTENVAEAAIKN--GVKKFVLISTDKAVNPT---NVMGAT 389 (588)
T ss_pred cC----CCceEEEhhhh-ccCcchhcC---HHHHHHHhhHhHHHHHHHHHHh--CCCEEEEEecCcccCCc---hHhhHH
Confidence 53 79999999974 444544444 4578899999999999988654 66899999998887653 679999
Q ss_pred HHHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 935 NSIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
|...|.++.+...+. ..-.++.+|.+
T Consensus 390 Kr~aE~~~~a~~~~~~~~~T~f~~VRFGNV 419 (588)
T COG1086 390 KRLAEKLFQAANRNVSGTGTRFCVVRFGNV 419 (588)
T ss_pred HHHHHHHHHHHhhccCCCCcEEEEEEecce
Confidence 999999999876542 33456666654
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.06 E-value=3e-09 Score=125.64 Aligned_cols=167 Identities=15% Similarity=0.181 Sum_probs=118.4
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
+++++||||+|.||..+++.|+++|.+ |+.+.|+........ .+..+.....++.++.+|+++.+++.++++
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 75 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYT-VKATVRDPNDPKKTE-HLLALDGAKERLHLFKANLLEEGSFDSVVD------ 75 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCE-EEEEEcCCCchhhHH-HHHhccCCCCceEEEeccccCcchHHHHHc------
Confidence 578999999999999999999999997 666677643221111 111111112367889999999988877765
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccc-cCC-C------------
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCG-RGN-A------------ 926 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~-~G~-~------------ 926 (1392)
.+|.|||+|+.... ... +.....+++|+.|+.++.+++... .....||++||.++. .|. +
T Consensus 76 ~~d~Vih~A~~~~~----~~~-~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~ 149 (322)
T PLN02662 76 GCEGVFHTASPFYH----DVT-DPQAELIDPAVKGTLNVLRSCAKV-PSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWF 149 (322)
T ss_pred CCCEEEEeCCcccC----CCC-ChHHHHHHHHHHHHHHHHHHHHhC-CCCCEEEEccCHHHhcCCCcCCCCCCcCCcccC
Confidence 47999999986421 111 112467889999999999887643 134689999998753 221 1
Q ss_pred --------CChhHHHHHHHHHHHHHHH-HHcCCCeEEEEccccC
Q psy1119 927 --------GQTNYGMANSIMERICEAR-RAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 927 --------gq~~Yaaana~ld~la~~r-~~~Glp~~ai~~g~~~ 961 (1392)
..+.|+.+|...+.+++.. +..|++.+.+..+.+-
T Consensus 150 ~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~ 193 (322)
T PLN02662 150 SDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVI 193 (322)
T ss_pred CChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCccc
Confidence 1247999999999988754 4459999988887653
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.3e-09 Score=123.12 Aligned_cols=161 Identities=19% Similarity=0.245 Sum_probs=112.9
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHh----cCCc--eEEEEeccCCCHHHHHHHHHHHh
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK----SYDV--QVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~----~~G~--~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
+|||||+|-||.++++.|++.+.++|++++|+... .-...++++ ..+. .+..+-+|++|.+.+.+++++.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~---l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~- 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENK---LYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY- 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHH---HHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT---
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhH---HHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc-
Confidence 58999999999999999999999999999998422 222333342 2233 3345689999999998887643
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
++|.|||+|.. ..-++.+..+ .+++..|+.||.|+.+++... .-+.||++|+--+..+ -..|+|+|..
T Consensus 77 ---~pdiVfHaAA~-KhVpl~E~~p---~eav~tNv~GT~nv~~aa~~~--~v~~~v~ISTDKAv~P---tnvmGatKrl 144 (293)
T PF02719_consen 77 ---KPDIVFHAAAL-KHVPLMEDNP---FEAVKTNVLGTQNVAEAAIEH--GVERFVFISTDKAVNP---TNVMGATKRL 144 (293)
T ss_dssp ---T-SEEEE-------HHHHCCCH---HHHHHHHCHHHHHHHHHHHHT--T-SEEEEEEECGCSS-----SHHHHHHHH
T ss_pred ---CCCEEEEChhc-CCCChHHhCH---HHHHHHHHHHHHHHHHHHHHc--CCCEEEEccccccCCC---CcHHHHHHHH
Confidence 79999999974 4455555444 577999999999999988765 5789999999877654 3789999999
Q ss_pred HHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 938 MERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 938 ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
++.++....... ....++-+|.+
T Consensus 145 aE~l~~~~~~~~~~~~t~f~~VRFGNV 171 (293)
T PF02719_consen 145 AEKLVQAANQYSGNSDTKFSSVRFGNV 171 (293)
T ss_dssp HHHHHHHHCCTSSSS--EEEEEEE-EE
T ss_pred HHHHHHHHhhhCCCCCcEEEEEEecce
Confidence 999999876654 44567777765
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.03 E-value=4.4e-09 Score=124.14 Aligned_cols=163 Identities=17% Similarity=0.194 Sum_probs=117.5
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
.++||||+|+||..+++.|+++|.+ |+++.|....... ........+ .+..+.+|+++.++++++++. +++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~-V~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~----~~~ 71 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHE-VVVLDNLSNGSPE---ALKRGERIT-RVTFVEGDLRDRELLDRLFEE----HKI 71 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCe-EEEEeCCCccchh---hhhhhcccc-ceEEEECCCCCHHHHHHHHHh----CCC
Confidence 3799999999999999999999997 5555553222111 112222222 577788999999999888764 479
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC------------CChh
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA------------GQTN 930 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~------------gq~~ 930 (1392)
|+|||+||...... +.++..+.+..++.++.++.+++... ...+||++||.+. .|.. ....
T Consensus 72 d~vv~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~ss~~~-~g~~~~~~~~e~~~~~~~~~ 144 (328)
T TIGR01179 72 DAVIHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAMQQT--GVKKFIFSSSAAV-YGEPSSIPISEDSPLGPINP 144 (328)
T ss_pred cEEEECccccCcch----hhcCchhhhhhhHHHHHHHHHHHHhc--CCCEEEEecchhh-cCCCCCCCccccCCCCCCCc
Confidence 99999999764432 22344567888999999998877543 3468998888653 3432 2367
Q ss_pred HHHHHHHHHHHHHHHHH--cCCCeEEEEccccC
Q psy1119 931 YGMANSIMERICEARRA--EGLPGLAVEWGAVG 961 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~--~Glp~~ai~~g~~~ 961 (1392)
|+.+|++.+.+++.... .+++.+.+.++.+-
T Consensus 145 y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~ 177 (328)
T TIGR01179 145 YGRSKLMSERILRDLSKADPGLSYVILRYFNVA 177 (328)
T ss_pred hHHHHHHHHHHHHHHHHhccCCCEEEEecCccc
Confidence 99999999998887654 58998888876553
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=5.7e-09 Score=125.01 Aligned_cols=167 Identities=13% Similarity=0.131 Sum_probs=117.7
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
.+|||||+|.||..+++.|+++|...++.+.|...... . .....+. .+.++.++.+|++|.++++++++.. .+
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~-~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~----~~ 74 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN-L-ESLADVS-DSERYVFEHADICDRAELDRIFAQH----QP 74 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccch-H-HHHHhcc-cCCceEEEEecCCCHHHHHHHHHhc----CC
Confidence 48999999999999999999999875665555321111 1 1111111 1345777899999999999888752 69
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-------CCCeEEEecccccccC-----------
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-------TLGQFVVFSSVSCGRG----------- 924 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-------~l~~fV~~SS~s~~~G----------- 924 (1392)
|.|||+|+..... ...+.....+++|+.|+.++.+++...+. ....||++||.+..-.
T Consensus 75 d~vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~ 150 (352)
T PRK10084 75 DAVMHLAAESHVD----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSE 150 (352)
T ss_pred CEEEECCcccCCc----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccc
Confidence 9999999865321 12233466899999999999988865421 2347999999653211
Q ss_pred ----------CCCChhHHHHHHHHHHHHHHHH-HcCCCeEEEEcccc
Q psy1119 925 ----------NAGQTNYGMANSIMERICEARR-AEGLPGLAVEWGAV 960 (1392)
Q Consensus 925 ----------~~gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~ 960 (1392)
......|+.+|.+.+.+++..+ ..|+|.+.+..+.+
T Consensus 151 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v 197 (352)
T PRK10084 151 ELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNN 197 (352)
T ss_pred cCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccce
Confidence 0124689999999999998754 45899888876654
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=9.3e-09 Score=122.38 Aligned_cols=161 Identities=16% Similarity=0.168 Sum_probs=113.8
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
+++||||+|+||..+|+.|+++|.+ |++++|...........+..+ .+.++..+.+|++|.+.+.++++. ..+
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~----~~~ 74 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHD-VVILDNLCNSKRSVLPVIERL--GGKHPTFVEGDIRNEALLTEILHD----HAI 74 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCe-EEEEecCCCchHhHHHHHHHh--cCCCceEEEccCCCHHHHHHHHhc----CCC
Confidence 5899999999999999999999997 555665432222111111111 234567788999999998887764 369
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC-------------CCCh
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN-------------AGQT 929 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~-------------~gq~ 929 (1392)
|.|||+|+...... ..+.....+..++.++.+|.++++.. ....||++||.+. .|. ...+
T Consensus 75 d~vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~-yg~~~~~~~~E~~~~~~p~~ 147 (338)
T PRK10675 75 DTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMRAA--NVKNLIFSSSATV-YGDQPKIPYVESFPTGTPQS 147 (338)
T ss_pred CEEEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHh-hCCCCCCccccccCCCCCCC
Confidence 99999998654321 12334567889999999999887653 4568999999753 221 2367
Q ss_pred hHHHHHHHHHHHHHHHHHc--CCCeEEEEc
Q psy1119 930 NYGMANSIMERICEARRAE--GLPGLAVEW 957 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~--Glp~~ai~~ 957 (1392)
.|+.+|.+.+.+++..+.. +++.+.+..
T Consensus 148 ~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~ 177 (338)
T PRK10675 148 PYGKSKLMVEQILTDLQKAQPDWSIALLRY 177 (338)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 8999999999999876543 666665554
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.7e-09 Score=119.24 Aligned_cols=194 Identities=18% Similarity=0.241 Sum_probs=119.9
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC-------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD-------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~-------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
+.++||+|+|+.+|+...|..++..|.....++.++ ..+...+++++++++.+.|... ..++++|+||||
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l---~~~~~~lvGhS~ 90 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDAL---QIEKATFIGHSM 90 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHc---CCCceEEEEECH
Confidence 345899999999999999999999998888888886 1123358999999999988743 346799999999
Q ss_pred hHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccC-------------CCCChHHHHHHHHhcCCccccCCHHHHHHH
Q psy1119 1228 GGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLR-------------KLPDWNAKLNYFLDLMPEDATHSRTYQRNL 1293 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~-------------~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~ 1293 (1392)
||.+|..+|.+... .+ .++++|++|........ .....+.....+...+. ........
T Consensus 91 Gg~va~~~a~~~~~---~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 162 (255)
T PRK10673 91 GGKAVMALTALAPD---RIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLN-----EEGVIQFL 162 (255)
T ss_pred HHHHHHHHHHhCHh---hcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcC-----CHHHHHHH
Confidence 99999999977543 35 78899876543210000 00011111111111110 00110000
Q ss_pred ------------HHHHHHHHHhhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEc-cCcccccc
Q psy1119 1294 ------------AHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVD-GNHFTVLD 1359 (1392)
Q Consensus 1294 ------------~~~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~-G~H~~ml~ 1359 (1392)
.+.+...+.....|.. ...+++|++++.+..|. ........+.+... ..+++.++ ++|+.+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~ 239 (255)
T PRK10673 163 LKSFVDGEWRFNVPVLWDQYPHIVGWEK--IPAWPHPALFIRGGNSPYVTEAYRDDLLAQFP-QARAHVIAGAGHWVHAE 239 (255)
T ss_pred HhcCCcceeEeeHHHHHHhHHHHhCCcc--cCCCCCCeEEEECCCCCCCCHHHHHHHHHhCC-CcEEEEeCCCCCeeecc
Confidence 1111112222222322 23678999999999887 44333344555443 46777776 58999998
Q ss_pred ChH
Q psy1119 1360 NIK 1362 (1392)
Q Consensus 1360 ~~~ 1362 (1392)
.|.
T Consensus 240 ~p~ 242 (255)
T PRK10673 240 KPD 242 (255)
T ss_pred CHH
Confidence 875
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=98.99 E-value=6.1e-09 Score=123.15 Aligned_cols=154 Identities=18% Similarity=0.196 Sum_probs=116.4
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
+++||||+|.||..+|+.|+++|.+ |+.++|+..... .+.. ..+..+.+|+++.++++++++ .+
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~-------~~~~--~~~~~~~~D~~~~~~l~~~~~------~~ 65 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEE-VRVLVRPTSDRR-------NLEG--LDVEIVEGDLRDPASLRKAVA------GC 65 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCE-EEEEEecCcccc-------cccc--CCceEEEeeCCCHHHHHHHHh------CC
Confidence 6899999999999999999999986 888888743211 1122 246678999999998887764 57
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC-C--------------
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA-G-------------- 927 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~-g-------------- 927 (1392)
|+|||+|+.... ..+++...++.++.|+.++.+++... ..++||++||.+...... +
T Consensus 66 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~ 137 (328)
T TIGR03466 66 RALFHVAADYRL------WAPDPEEMYAANVEGTRNLLRAALEA--GVERVVYTSSVATLGVRGDGTPADETTPSSLDDM 137 (328)
T ss_pred CEEEEeceeccc------CCCCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEechhhcCcCCCCCCcCccCCCCcccc
Confidence 999999985321 12345677889999999999887653 457899999976543211 1
Q ss_pred ChhHHHHHHHHHHHHHHHHHc-CCCeEEEEcccc
Q psy1119 928 QTNYGMANSIMERICEARRAE-GLPGLAVEWGAV 960 (1392)
Q Consensus 928 q~~Yaaana~ld~la~~r~~~-Glp~~ai~~g~~ 960 (1392)
.+.|+.+|.+.+.+++....+ |++.+.+..+.+
T Consensus 138 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~ 171 (328)
T TIGR03466 138 IGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTP 171 (328)
T ss_pred cChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 357999999999999876654 899888887665
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.8e-08 Score=118.47 Aligned_cols=166 Identities=14% Similarity=0.160 Sum_probs=116.2
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCC-ceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGA-RKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GA-r~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
+++||||+|+||.+++++|+++|. .+|++++|...... . ..++.+.. ...+.++.+|++|++++.++++.. .
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~-~-~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~----~ 73 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGN-L-ENLADLED-NPRYRFVKGDIGDRELVSRLFTEH----Q 73 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchh-h-hhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhc----C
Confidence 479999999999999999999983 24777766321111 1 11222221 224667899999999998887653 5
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC------------CCCh
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN------------AGQT 929 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~------------~gq~ 929 (1392)
+|.|||+|+.... +.+.+++...+++++.|+.++.+++...... ..||++||....-+. ....
T Consensus 74 ~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~ 148 (317)
T TIGR01181 74 PDAVVHFAAESHV----DRSISGPAAFIETNVVGTYTLLEAVRKYWHE-FRFHHISTDEVYGDLEKGDAFTETTPLAPSS 148 (317)
T ss_pred CCEEEEcccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCCC-ceEEEeeccceeCCCCCCCCcCCCCCCCCCC
Confidence 8999999986532 2344567778999999999998877553222 268999986432111 1234
Q ss_pred hHHHHHHHHHHHHHHHH-HcCCCeEEEEcccc
Q psy1119 930 NYGMANSIMERICEARR-AEGLPGLAVEWGAV 960 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~ 960 (1392)
.|+++|...+.+++... ..|++.+.+..+.+
T Consensus 149 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i 180 (317)
T TIGR01181 149 PYSASKAASDHLVRAYHRTYGLPALITRCSNN 180 (317)
T ss_pred chHHHHHHHHHHHHHHHHHhCCCeEEEEeccc
Confidence 79999999999998643 56899888877654
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.1e-08 Score=118.19 Aligned_cols=93 Identities=22% Similarity=0.442 Sum_probs=74.5
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCC--CCCHHHHHHHHHHHHhhhccCCCCcEEEEeechh
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNP--PDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFG 1228 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~--~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~G 1228 (1392)
++||+|+|+.+++...|.++.+.|.....|+.++ ...+ ..+++++++++.+.|... ..+|+.|+|||||
T Consensus 25 ~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l---~~~~~~LvG~S~G 101 (276)
T TIGR02240 25 LTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYL---DYGQVNAIGVSWG 101 (276)
T ss_pred CCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHh---CcCceEEEEECHH
Confidence 3799999999999999999999998888888876 1111 347999998888777643 3468999999999
Q ss_pred HHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1229 GMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1229 g~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
|.||+.+|.+-. ..+ .|+|+++++
T Consensus 102 G~va~~~a~~~p---~~v~~lvl~~~~~ 126 (276)
T TIGR02240 102 GALAQQFAHDYP---ERCKKLILAATAA 126 (276)
T ss_pred HHHHHHHHHHCH---HHhhheEEeccCC
Confidence 999999997533 245 888998754
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.4e-08 Score=113.88 Aligned_cols=172 Identities=20% Similarity=0.217 Sum_probs=133.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.+++++||||+|=||..+++.|.++|.+ |.-+-|+..+ +...+.+..++..+-+...+.+|++++++...+++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~-V~gtVR~~~~-~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~----- 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYT-VRGTVRDPED-EKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID----- 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCE-EEEEEcCcch-hhhHHHHHhcccCcccceEEeccccccchHHHHHh-----
Confidence 5689999999999999999999999998 8888888654 22333466666666678899999999999998877
Q ss_pred CCccEEEECcccCCCccccCCCHHHHH-HHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC---CCC-------
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFN-ASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN---AGQ------- 928 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~-~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~---~gq------- 928 (1392)
..|||||.|......... .+ +.+.|.+.|+.|.-+++.+. +....||+.||++++..+ .+.
T Consensus 78 -gcdgVfH~Asp~~~~~~~------~e~~li~pav~Gt~nVL~ac~~~-~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~ 149 (327)
T KOG1502|consen 78 -GCDGVFHTASPVDFDLED------PEKELIDPAVKGTKNVLEACKKT-KSVKRVVYTSSTAAVRYNGPNIGENSVVDEE 149 (327)
T ss_pred -CCCEEEEeCccCCCCCCC------cHHhhhhHHHHHHHHHHHHHhcc-CCcceEEEeccHHHhccCCcCCCCCcccccc
Confidence 489999999764332221 23 68999999999999988664 246899999999999865 111
Q ss_pred ------------hhHHHHHHHHHHHHHHHHHc-CCCeEEEEccccCccccc
Q psy1119 929 ------------TNYGMANSIMERICEARRAE-GLPGLAVEWGAVGEVGLV 966 (1392)
Q Consensus 929 ------------~~Yaaana~ld~la~~r~~~-Glp~~ai~~g~~~~~G~~ 966 (1392)
..|+.+|..-+.-|-....+ |++.++|+.+.+-+-++.
T Consensus 150 ~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~ 200 (327)
T KOG1502|consen 150 SWSDLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQ 200 (327)
T ss_pred cCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcc
Confidence 25999999888777666555 689999998877544443
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.5e-08 Score=119.99 Aligned_cols=169 Identities=14% Similarity=0.190 Sum_probs=117.4
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC------CceEEEEeccCCCHHHHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY------DVQVLISTDDITTEAGVVNLL 853 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~------G~~v~~~~~Dv~~~~~v~~l~ 853 (1392)
.++++|||||+|+||.++++.|+++|++ |+++.|+... .. .++.+... +..+.++.+|++|.+++.+++
T Consensus 52 ~~k~VLVTGatGfIG~~lv~~L~~~G~~-V~~~~r~~~~---~~-~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i 126 (367)
T PLN02686 52 EARLVCVTGGVSFLGLAIVDRLLRHGYS-VRIAVDTQED---KE-KLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAF 126 (367)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCE-EEEEeCCHHH---HH-HHHHHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence 4689999999999999999999999997 6666676321 11 12222211 124778899999999998887
Q ss_pred HHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccc-cccCC------C
Q psy1119 854 TEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVS-CGRGN------A 926 (1392)
Q Consensus 854 ~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s-~~~G~------~ 926 (1392)
+. +|.|||+|+.......... +.....+++.|+.++.+++... .....||++||.+ +..|. +
T Consensus 127 ~~------~d~V~hlA~~~~~~~~~~~----~~~~~~~nv~gt~~llea~~~~-~~v~r~V~~SS~~~~vyg~~~~~~~~ 195 (367)
T PLN02686 127 DG------CAGVFHTSAFVDPAGLSGY----TKSMAELEAKASENVIEACVRT-ESVRKCVFTSSLLACVWRQNYPHDLP 195 (367)
T ss_pred Hh------ccEEEecCeeecccccccc----cchhhhhhHHHHHHHHHHHHhc-CCccEEEEeccHHHhcccccCCCCCC
Confidence 63 6889999986533221111 1233456799999998887542 2356899999975 33221 0
Q ss_pred ----------------CChhHHHHHHHHHHHHHHHH-HcCCCeEEEEccccCccc
Q psy1119 927 ----------------GQTNYGMANSIMERICEARR-AEGLPGLAVEWGAVGEVG 964 (1392)
Q Consensus 927 ----------------gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~~~~G 964 (1392)
..+.|+++|.+.+.+++... ..|++..++..+.+-.-|
T Consensus 196 ~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~ 250 (367)
T PLN02686 196 PVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPG 250 (367)
T ss_pred cccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCC
Confidence 23469999999999997643 459999998887664333
|
|
| >KOG1478|consensus | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.3e-08 Score=108.81 Aligned_cols=171 Identities=17% Similarity=0.224 Sum_probs=131.7
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCc----eEEEecCCCcccHHHHHHHHHHh-cCCceEEEEeccCCCHHHHHHHHHH
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGAR----KLVLTSRSGVKNGYQALRIKIWK-SYDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr----~lvl~sRs~~~~~~~~~~~~~l~-~~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
.|++||||+.+|||+++|.+|.+.--. ++++++|+-++.++....+.+.- ..-+++.++..|+++..++.++..+
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 478999999999999999999876433 68888998655444433333221 2357889999999999999999999
Q ss_pred H-hhcCCccEEEECcccCCCc--------------c-------------ccCCCHHHHHHHHhhHhHHHHHHHHHHhhh-
Q psy1119 856 A-NKLGPVDGIFNLAVVLKDA--------------L-------------FENQTPEDFNASLGPKANATKYFDKYSRTM- 906 (1392)
Q Consensus 856 ~-~~~g~I~gvi~~Agv~~d~--------------~-------------~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~- 906 (1392)
+ ++|.++|.|+-|||..... + ....|.|++..+++.||.|.+.|.+-..++
T Consensus 83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll 162 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL 162 (341)
T ss_pred HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence 8 6799999999999975421 1 124577889999999999999998766543
Q ss_pred CC-CCCeEEEecccccccC---------CCCChhHHHHHHHHHHHHHHHHHcCCC
Q psy1119 907 CP-TLGQFVVFSSVSCGRG---------NAGQTNYGMANSIMERICEARRAEGLP 951 (1392)
Q Consensus 907 ~~-~l~~fV~~SS~s~~~G---------~~gq~~Yaaana~ld~la~~r~~~Glp 951 (1392)
|. +...+|..||..+--- ..|...|..+|-..|-|.-...+.+.|
T Consensus 163 ~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~ 217 (341)
T KOG1478|consen 163 CHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKP 217 (341)
T ss_pred hcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccc
Confidence 32 2248999999887532 357788999999999887776667766
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.7e-08 Score=119.39 Aligned_cols=164 Identities=15% Similarity=0.152 Sum_probs=115.5
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCC-ceEEEecCCCcccHHHHHHHHHHhcCC--------ceEEEEeccCCCHH------
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGA-RKLVLTSRSGVKNGYQALRIKIWKSYD--------VQVLISTDDITTEA------ 847 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GA-r~lvl~sRs~~~~~~~~~~~~~l~~~G--------~~v~~~~~Dv~~~~------ 847 (1392)
+++||||+|+||..+++.|+++|. .+|+.+.|+.......+...+.++..+ .++.++.+|++++.
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 479999999999999999999993 248888887543322222222222221 36888999998753
Q ss_pred HHHHHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC-
Q psy1119 848 GVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA- 926 (1392)
Q Consensus 848 ~v~~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~- 926 (1392)
....+ ...+|.|||+|+..... ..+....++++.|+.++.+++... ....||++||++......
T Consensus 81 ~~~~~------~~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~~~--~~~~~v~iSS~~v~~~~~~ 145 (367)
T TIGR01746 81 EWERL------AENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAASG--RAKPLHYVSTISVLAAIDL 145 (367)
T ss_pred HHHHH------HhhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHhhC--CCceEEEEccccccCCcCC
Confidence 22222 23699999999865321 234566788999999998877543 345699999987654321
Q ss_pred ---------------CChhHHHHHHHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 927 ---------------GQTNYGMANSIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 927 ---------------gq~~Yaaana~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
....|+.+|...+.+++..+..|++...+..|.+-
T Consensus 146 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~ 195 (367)
T TIGR01746 146 STVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRIL 195 (367)
T ss_pred CCccccccccccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCcee
Confidence 12469999999999998877779999888887664
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=98.88 E-value=4.3e-08 Score=109.30 Aligned_cols=196 Identities=17% Similarity=0.227 Sum_probs=112.1
Q ss_pred ceeEeecCCCccccccHHHHhhcCCceEEEecC-------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHH
Q psy1119 1158 NTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD-------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGM 1230 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~-------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~ 1230 (1392)
+||+|+|+.+++...|..++..|.....++.++ ......+++++++.+.+.+ .+|++++||||||.
T Consensus 5 ~~iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~-------~~~~~lvG~S~Gg~ 77 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQA-------PDPAIWLGWSLGGL 77 (245)
T ss_pred ceEEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCCCCcCHHHHHHHHHHhC-------CCCeEEEEEcHHHH
Confidence 789999999999999999999998778888775 1122357877777665432 35899999999999
Q ss_pred HHHHHHHHHHHcCCcc-EEEEEeCCCCCCccc-cC-CCC-------------ChHHHHHHHHhcCCccccCCHHHHHHHH
Q psy1119 1231 VALELAIKLEQLGTKC-HLYLVDSAPDYVLTS-LR-KLP-------------DWNAKLNYFLDLMPEDATHSRTYQRNLA 1294 (1392)
Q Consensus 1231 VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~-l~-~~~-------------~~~~~l~~~~~~~~~~~~~~~~~l~~~~ 1294 (1392)
+|+.+|.+-.+ .+ .++++++.|...... .. ... .....+..+............+....+.
T Consensus 78 ~a~~~a~~~p~---~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (245)
T TIGR01738 78 VALHIAATHPD---RVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARALK 154 (245)
T ss_pred HHHHHHHHCHH---hhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHHH
Confidence 99998875332 24 788888866432110 00 000 0000011111000000000011111110
Q ss_pred H-----------HHHHHHHhhccccCC-CCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEc-cCccccccC
Q psy1119 1295 H-----------AAYKRITSILKYTDP-KHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVD-GNHFTVLDN 1360 (1392)
Q Consensus 1295 ~-----------~~~~~~~~~~~y~~~-~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~-G~H~~ml~~ 1360 (1392)
. .+...+.....+... ...++++|++++.+++|. ........+.+... ..+++.++ ++|+.++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~ 233 (245)
T TIGR01738 155 QTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP-HSELYIFAKAAHAPFLSH 233 (245)
T ss_pred HHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC-CCeEEEeCCCCCCccccC
Confidence 0 111111111111111 123688999999999987 44444344444443 46788897 699999998
Q ss_pred hHHH
Q psy1119 1361 IKSA 1364 (1392)
Q Consensus 1361 ~~~~ 1364 (1392)
|...
T Consensus 234 p~~~ 237 (245)
T TIGR01738 234 AEAF 237 (245)
T ss_pred HHHH
Confidence 7543
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.6e-08 Score=109.99 Aligned_cols=93 Identities=23% Similarity=0.400 Sum_probs=72.8
Q ss_pred ceeEeecCCCccccccHHHHhhcCCceEEEecC----C--CC----CCCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1158 NTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD----H--TN----PPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~----~--e~----~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
++|+|+|+.+|+...|.+++.+|.....|+.++ + .. ...+++++++.++..+.+.. +.+|+.|+||||
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~ 79 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL--GIEPFFLVGYSM 79 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc--CCCeEEEEEecc
Confidence 689999999999999999999998667777775 1 11 24588999988676665442 567899999999
Q ss_pred hHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1228 GGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
||.+|.++|.+... .+ .++++++.+
T Consensus 80 Gg~ia~~~a~~~~~---~v~~lil~~~~~ 105 (251)
T TIGR03695 80 GGRIALYYALQYPE---RVQGLILESGSP 105 (251)
T ss_pred HHHHHHHHHHhCch---heeeeEEecCCC
Confidence 99999999997543 35 677777654
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=8e-08 Score=115.77 Aligned_cols=93 Identities=25% Similarity=0.362 Sum_probs=73.3
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCceEEEecC----C----CCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD----H----TNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~----~----e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
.++|++|+|+.+|+...|..+...|...+.++.++ + .....+++++++.+.+.+... +..++.|+||||
T Consensus 130 ~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvG~S~ 206 (371)
T PRK14875 130 DGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDAL---GIERAHLVGHSM 206 (371)
T ss_pred CCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc---CCccEEEEeech
Confidence 35789999999999999999999998778888876 1 223568999999998887643 345799999999
Q ss_pred hHHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1228 GGMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
||.+|+++|.+- ...+ .++++++.
T Consensus 207 Gg~~a~~~a~~~---~~~v~~lv~~~~~ 231 (371)
T PRK14875 207 GGAVALRLAARA---PQRVASLTLIAPA 231 (371)
T ss_pred HHHHHHHHHHhC---chheeEEEEECcC
Confidence 999999999762 3345 67777653
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.2e-08 Score=113.21 Aligned_cols=156 Identities=20% Similarity=0.167 Sum_probs=112.4
Q ss_pred EEEcCcchHHHHHHHHHHHhCC-ceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCcc
Q psy1119 785 IICGGLGGFGLELADWLVLRGA-RKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVD 863 (1392)
Q Consensus 785 lItGG~gGiG~~lA~~La~~GA-r~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~ 863 (1392)
|||||+|=||..+++.|.++|. ..|..+.|+..... ...+...+. ..++.+|++|++++.++++ .+|
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~-----~~~~~~~~~-~~~~~~Di~d~~~l~~a~~------g~d 68 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF-----LKDLQKSGV-KEYIQGDITDPESLEEALE------GVD 68 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc-----chhhhcccc-eeEEEeccccHHHHHHHhc------CCc
Confidence 6999999999999999999993 34666666543211 111222221 2288999999999998876 478
Q ss_pred EEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC-----------------
Q psy1119 864 GIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA----------------- 926 (1392)
Q Consensus 864 gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~----------------- 926 (1392)
+|||+|....... ....+..+++|+.||.|+-+++... .-..||+.||++.+..+.
T Consensus 69 ~V~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~~~--~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~ 141 (280)
T PF01073_consen 69 VVFHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAARKA--GVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSS 141 (280)
T ss_pred eEEEeCccccccC-----cccHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcCcceeEeccCCCCcccCCcCCccccc
Confidence 9999998654322 3446778999999999999988754 568999999999876511
Q ss_pred CChhHHHHHHHHHHHHHHHHH----cC--CCeEEEEccc
Q psy1119 927 GQTNYGMANSIMERICEARRA----EG--LPGLAVEWGA 959 (1392)
Q Consensus 927 gq~~Yaaana~ld~la~~r~~----~G--lp~~ai~~g~ 959 (1392)
....|+.+|+.-+.++..-.. .| +...+|....
T Consensus 142 ~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~ 180 (280)
T PF01073_consen 142 PLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAG 180 (280)
T ss_pred ccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccE
Confidence 334799999999999876443 12 5555665544
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=98.79 E-value=7.4e-08 Score=116.65 Aligned_cols=162 Identities=17% Similarity=0.101 Sum_probs=112.6
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
..+++++||||+|.||+.+++.|+++|.+ |++++|+......... ..........+.++.+|++|.+++.++++...
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~-V~~l~R~~~~~~~~~~-~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~- 134 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYN-VVAVAREKSGIRGKNG-KEDTKKELPGAEVVFGDVTDADSLRKVLFSEG- 134 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEEechhhccccch-hhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC-
Confidence 35678999999999999999999999996 7788887532211000 01111112246778999999999998887541
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
+++|.||||++..... ..+. ++.++.++.++.+++... ...+||++||+... .....|..+|..+
T Consensus 135 -~~~D~Vi~~aa~~~~~-----~~~~----~~vn~~~~~~ll~aa~~~--gv~r~V~iSS~~v~---~p~~~~~~sK~~~ 199 (390)
T PLN02657 135 -DPVDVVVSCLASRTGG-----VKDS----WKIDYQATKNSLDAGREV--GAKHFVLLSAICVQ---KPLLEFQRAKLKF 199 (390)
T ss_pred -CCCcEEEECCccCCCC-----Cccc----hhhHHHHHHHHHHHHHHc--CCCEEEEEeecccc---CcchHHHHHHHHH
Confidence 1799999998853211 1122 345677888988877643 45789999998643 2345788999999
Q ss_pred HHHHHHHHHcCCCeEEEEccc
Q psy1119 939 ERICEARRAEGLPGLAVEWGA 959 (1392)
Q Consensus 939 d~la~~r~~~Glp~~ai~~g~ 959 (1392)
+...+. +..|++.+.+..+.
T Consensus 200 E~~l~~-~~~gl~~tIlRp~~ 219 (390)
T PLN02657 200 EAELQA-LDSDFTYSIVRPTA 219 (390)
T ss_pred HHHHHh-ccCCCCEEEEccHH
Confidence 888765 34688887777654
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=7.5e-08 Score=108.54 Aligned_cols=93 Identities=17% Similarity=0.222 Sum_probs=74.1
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecC-------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhH
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD-------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGG 1229 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~-------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg 1229 (1392)
++||+|+|+.+|+...|.++++.|. ...++.++ ..+...+++++++.+.+.|++. +.+|++|+||||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvG~S~Gg 77 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSY---NILPYWLVGYSLGG 77 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC-CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHc---CCCCeEEEEECHHH
Confidence 3689999999999999999999995 57777775 1222358999999999988743 46799999999999
Q ss_pred HHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1230 MVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1230 ~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
.+|.++|.+... ..+ .++++++.+
T Consensus 78 ~va~~~a~~~~~--~~v~~lvl~~~~~ 102 (242)
T PRK11126 78 RIAMYYACQGLA--GGLCGLIVEGGNP 102 (242)
T ss_pred HHHHHHHHhCCc--ccccEEEEeCCCC
Confidence 999999997532 125 778777654
|
|
| >PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.4e-08 Score=99.99 Aligned_cols=73 Identities=14% Similarity=0.109 Sum_probs=56.4
Q ss_pred CCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---------eCCCeEEEee-----------
Q psy1119 456 INHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR---------DSGKRVMGLT----------- 515 (1392)
Q Consensus 456 ~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~---------~vGdrV~gl~----------- 515 (1392)
|+||+|||.|+|||++|++++.|.... ....|.++|||++|+|+ ++||+|+...
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~------~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~ 74 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPP------PPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCL 74 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSS------TSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHH
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhcccc------CCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhc
Confidence 589999999999999999999995211 12348899999999997 4788986621
Q ss_pred ----------------cCCcccceEEecccceEEc
Q psy1119 516 ----------------SGRSLANCCETDVEMAWEI 534 (1392)
Q Consensus 516 ----------------~~g~~a~~v~~~~~~~~~i 534 (1392)
..|+||+|+.++++.++|+
T Consensus 75 ~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 75 SGRPNLCPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTGGGTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred CCccccCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 1389999999999999885
|
1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A .... |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.2e-07 Score=106.46 Aligned_cols=161 Identities=21% Similarity=0.279 Sum_probs=121.2
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCcc
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVD 863 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~ 863 (1392)
+|||||+|=||.++++.|.++|.. ++.++|+......... . . .+..+.+|+++.+.++++++.. .+|
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~-v~~~~~~~~~~~~~~~---~--~---~~~~~~~dl~~~~~~~~~~~~~----~~d 67 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHE-VIVLSRSSNSESFEEK---K--L---NVEFVIGDLTDKEQLEKLLEKA----NID 67 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTE-EEEEESCSTGGHHHHH---H--T---TEEEEESETTSHHHHHHHHHHH----TES
T ss_pred EEEEccCCHHHHHHHHHHHHcCCc-cccccccccccccccc---c--c---eEEEEEeecccccccccccccc----Cce
Confidence 589999999999999999999998 5566666433322111 1 1 6788899999999999999876 899
Q ss_pred EEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC------------CChhH
Q psy1119 864 GIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA------------GQTNY 931 (1392)
Q Consensus 864 gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~------------gq~~Y 931 (1392)
.|||+|+.... ..+.++....+..++.++.++.+++... +...||++||. +..|.. ....|
T Consensus 68 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~i~~sS~-~~y~~~~~~~~~e~~~~~~~~~Y 140 (236)
T PF01370_consen 68 VVIHLAAFSSN----PESFEDPEEIIEANVQGTRNLLEAAREA--GVKRFIFLSSA-SVYGDPDGEPIDEDSPINPLSPY 140 (236)
T ss_dssp EEEEEBSSSSH----HHHHHSHHHHHHHHHHHHHHHHHHHHHH--TTSEEEEEEEG-GGGTSSSSSSBETTSGCCHSSHH
T ss_pred EEEEeeccccc----cccccccccccccccccccccccccccc--ccccccccccc-ccccccccccccccccccccccc
Confidence 99999986531 1122456677888999999998888765 34789999994 343332 24579
Q ss_pred HHHHHHHHHHHHHHHH-cCCCeEEEEccccCccc
Q psy1119 932 GMANSIMERICEARRA-EGLPGLAVEWGAVGEVG 964 (1392)
Q Consensus 932 aaana~ld~la~~r~~-~Glp~~ai~~g~~~~~G 964 (1392)
+.+|...+.+++.... .+++.+.+..+.+-+-+
T Consensus 141 ~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 141 GASKRAAEELLRDYAKKYGLRVTILRPPNVYGPG 174 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTT
T ss_pred cccccccccccccccccccccccccccccccccc
Confidence 9999999999986554 49999988887764433
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.2e-07 Score=108.82 Aligned_cols=93 Identities=20% Similarity=0.247 Sum_probs=72.8
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecC----C--CCC---CCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD----H--TNP---PDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~----~--e~~---~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
+++|+|+|+.+|+...|..+...|.....++.++ + ..+ ..+++++++.+.+.|+.. ...|++|+||||
T Consensus 28 ~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~---~~~~~~lvG~S~ 104 (278)
T TIGR03056 28 GPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE---GLSPDGVIGHSA 104 (278)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc---CCCCceEEEECc
Confidence 4789999999999999999999998777777775 1 111 358999999999888643 346899999999
Q ss_pred hHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1228 GGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
||.+|+++|.+.. ..+ .++++++.+
T Consensus 105 Gg~~a~~~a~~~p---~~v~~~v~~~~~~ 130 (278)
T TIGR03056 105 GAAIALRLALDGP---VTPRMVVGINAAL 130 (278)
T ss_pred cHHHHHHHHHhCC---cccceEEEEcCcc
Confidence 9999999987543 224 577777643
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PF00550 PP-binding: Phosphopantetheine attachment site; InterPro: IPR006163 Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups [] | Back alignment and domain information |
|---|
Probab=98.76 E-value=2e-08 Score=89.46 Aligned_cols=65 Identities=26% Similarity=0.526 Sum_probs=60.6
Q ss_pred hHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHH
Q psy1119 1021 NIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIA 1086 (1392)
Q Consensus 1021 ~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~ 1086 (1392)
.+.+.|++++++ +.++++++++|+++|+|||.++++.++|+++||+.++..++ ..+|+++|++++
T Consensus 2 ~l~~~~~~~l~~-~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~i~~~~~~~~~ti~~l~~~i 67 (67)
T PF00550_consen 2 QLREIIAEVLGV-DPEEIDPDTDFFDLGLDSLDAIELVSELEEEFGIKIPPSDLFEHPTIRDLAEYI 67 (67)
T ss_dssp HHHHHHHHHHTS-SGGCTSTTSBTTTTTSSHHHHHHHHHHHHHHHTSSTTHHHHCTSSSHHHHHHHH
T ss_pred HHHHHHHHHHCc-CHhhCCCCCCHHHhCCchHHHHHHHHHHHHHHcCCCCHHHHHcCCCHHHHHhHC
Confidence 578999999996 56899999999999999999999999999999999999999 899999998864
|
The amino-terminal region of the ACP proteins is well defined and consists of alpha four helices arranged in a right-handed bundle held together by interhelical hydrophobic interactions. The Asp-Ser-Leu (DSL)motif is conserved in all of the ACP sequences, and the 4'-PP prosthetic group is covalently linked via a phosphodiester bond to the serine residue. The DSL sequence is present at the amino terminus of helix II, a domain of the protein referred to as the recognition helix and which is responsible for the interaction of ACPs with the enzymes of type II fatty acid synthesis [].; GO: 0048037 cofactor binding; PDB: 3EJB_E 3EJE_G 1L0I_A 2FHS_C 3EJD_E 2FAE_B 2FAD_B 2FAC_B 2K94_A 1ACP_A .... |
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.6e-07 Score=110.77 Aligned_cols=96 Identities=21% Similarity=0.243 Sum_probs=75.8
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCC--CCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNP--PDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~--~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
|.++||+++|+.+++...|..+...|.....|+.++ .+.+ .-+++.+++++.+.|+.. ...|++|+|||
T Consensus 84 g~g~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~---~~~~~~lvG~S 160 (354)
T PLN02578 84 GEGLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEV---VKEPAVLVGNS 160 (354)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHh---ccCCeEEEEEC
Confidence 356899999999999999989889998778888876 1222 247888898888888754 24689999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
+||.||.++|.+..+ .+ .++++++++.
T Consensus 161 ~Gg~ia~~~A~~~p~---~v~~lvLv~~~~~ 188 (354)
T PLN02578 161 LGGFTALSTAVGYPE---LVAGVALLNSAGQ 188 (354)
T ss_pred HHHHHHHHHHHhChH---hcceEEEECCCcc
Confidence 999999999997643 35 7888887553
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.4e-07 Score=110.90 Aligned_cols=170 Identities=14% Similarity=0.063 Sum_probs=117.6
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHH-HHHHHHHh-cCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQ-ALRIKIWK-SYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~-~~~~~~l~-~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
.+.++++||||+|=||..+++.|.++|.+ |+.++|........ ........ ....++.++.+|++|.+.+..+++
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~-- 89 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQT-VIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK-- 89 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCE-EEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--
Confidence 34578999999999999999999999986 66666653221111 11111000 011246788999999988877765
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC-C---------
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN-A--------- 926 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~-~--------- 926 (1392)
.+|.|||+|+.... .... ++-...+++|+.|+.+|.++++.. ....||++||.+. .|. +
T Consensus 90 ----~~d~ViHlAa~~~~-~~~~---~~~~~~~~~Nv~gt~nll~~~~~~--~~~~~v~~SS~~v-yg~~~~~~~~e~~~ 158 (348)
T PRK15181 90 ----NVDYVLHQAALGSV-PRSL---KDPIATNSANIDGFLNMLTAARDA--HVSSFTYAASSST-YGDHPDLPKIEERI 158 (348)
T ss_pred ----CCCEEEECccccCc-hhhh---hCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeechHh-hCCCCCCCCCCCCC
Confidence 37999999986432 1111 223456889999999999888654 4568999998743 231 1
Q ss_pred --CChhHHHHHHHHHHHHHH-HHHcCCCeEEEEccccCc
Q psy1119 927 --GQTNYGMANSIMERICEA-RRAEGLPGLAVEWGAVGE 962 (1392)
Q Consensus 927 --gq~~Yaaana~ld~la~~-r~~~Glp~~ai~~g~~~~ 962 (1392)
..+.|+.+|.+.+.+++. .+..|++.+.+-.+.+-+
T Consensus 159 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyG 197 (348)
T PRK15181 159 GRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFG 197 (348)
T ss_pred CCCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeC
Confidence 124799999999998875 445699998888766543
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.7e-07 Score=110.31 Aligned_cols=155 Identities=17% Similarity=0.195 Sum_probs=108.2
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCcc
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVD 863 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~ 863 (1392)
+|||||+|.||..+++.|.++|.+.|++++|+.... ....+ +. ..+..|+++.+.++.+.+. .+..+|
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-----~~~~~---~~--~~~~~d~~~~~~~~~~~~~--~~~~~D 68 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-----KFLNL---AD--LVIADYIDKEDFLDRLEKG--AFGKIE 68 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-----hhhhh---hh--eeeeccCcchhHHHHHHhh--ccCCCC
Confidence 489999999999999999999986677777653211 11111 11 2456788888777665543 356899
Q ss_pred EEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC------------CCChhH
Q psy1119 864 GIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN------------AGQTNY 931 (1392)
Q Consensus 864 gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~------------~gq~~Y 931 (1392)
.|||+|+... .+.+++...++.++.|+.++.+++... . ..||++||.+ +.|. ...+.|
T Consensus 69 ~vvh~A~~~~------~~~~~~~~~~~~n~~~~~~ll~~~~~~--~-~~~v~~SS~~-vy~~~~~~~~e~~~~~~p~~~Y 138 (314)
T TIGR02197 69 AIFHQGACSD------TTETDGEYMMENNYQYSKRLLDWCAEK--G-IPFIYASSAA-TYGDGEAGFREGRELERPLNVY 138 (314)
T ss_pred EEEECccccC------ccccchHHHHHHHHHHHHHHHHHHHHh--C-CcEEEEccHH-hcCCCCCCcccccCcCCCCCHH
Confidence 9999998642 223456778899999999999887653 2 3699999965 3331 145689
Q ss_pred HHHHHHHHHHHHH-HHH--cCCCeEEEEcccc
Q psy1119 932 GMANSIMERICEA-RRA--EGLPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~-r~~--~Glp~~ai~~g~~ 960 (1392)
+.+|...+.+++. ... -+.+...+-++.+
T Consensus 139 ~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~v 170 (314)
T TIGR02197 139 GYSKFLFDQYVRRRVLPEALSAQVVGLRYFNV 170 (314)
T ss_pred HHHHHHHHHHHHHHhHhhccCCceEEEEEeec
Confidence 9999999999874 222 2456666655443
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.7e-07 Score=112.06 Aligned_cols=158 Identities=18% Similarity=0.165 Sum_probs=110.5
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhC-CceEEEecCCCcccHHHHHHHHHHhcCC-----ceEEEEeccCCCHHHHHHHHHH
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRG-ARKLVLTSRSGVKNGYQALRIKIWKSYD-----VQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~G-Ar~lvl~sRs~~~~~~~~~~~~~l~~~G-----~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
++++||||+|-||..+++.|+++| .+ |+.++|+... . ..+...+ ..+.++.+|++|.+.++++++
T Consensus 15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~-V~~l~r~~~~---~----~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~- 85 (386)
T PLN02427 15 LTICMIGAGGFIGSHLCEKLMTETPHK-VLALDVYNDK---I----KHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK- 85 (386)
T ss_pred cEEEEECCcchHHHHHHHHHHhcCCCE-EEEEecCchh---h----hhhhccccccCCCCeEEEEcCCCChHHHHHHhh-
Confidence 579999999999999999999984 65 7777776321 1 1111111 257788999999998887765
Q ss_pred HhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC---------
Q psy1119 856 ANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA--------- 926 (1392)
Q Consensus 856 ~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~--------- 926 (1392)
.+|.|||+|+......... .+ ...+..|+.|+.++.++++.. . ..||++||.+. .|..
T Consensus 86 -----~~d~ViHlAa~~~~~~~~~-~~---~~~~~~n~~gt~~ll~aa~~~--~-~r~v~~SS~~v-Yg~~~~~~~~e~~ 152 (386)
T PLN02427 86 -----MADLTINLAAICTPADYNT-RP---LDTIYSNFIDALPVVKYCSEN--N-KRLIHFSTCEV-YGKTIGSFLPKDH 152 (386)
T ss_pred -----cCCEEEEcccccChhhhhh-Ch---HHHHHHHHHHHHHHHHHHHhc--C-CEEEEEeeeee-eCCCcCCCCCccc
Confidence 3699999998653222111 11 133457899999998887643 2 58999999753 3321
Q ss_pred -------------------------CChhHHHHHHHHHHHHHHHH-HcCCCeEEEEccccC
Q psy1119 927 -------------------------GQTNYGMANSIMERICEARR-AEGLPGLAVEWGAVG 961 (1392)
Q Consensus 927 -------------------------gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~~ 961 (1392)
..+.|+++|...+.++.... ..|++.+.+..+.+-
T Consensus 153 p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vy 213 (386)
T PLN02427 153 PLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWI 213 (386)
T ss_pred ccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEeccccee
Confidence 12369999999999987643 458998888776554
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.6e-07 Score=108.42 Aligned_cols=98 Identities=16% Similarity=0.161 Sum_probs=74.6
Q ss_pred CCCCceeEeecCCCccccccHHHHhhcCC-ceEEEecC----C--CC---CCCCHHHHHHHHHHHHhhhccCCCCcEEEE
Q psy1119 1154 VGNNNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD----H--TN---PPDTIPEMADSLLPHFKKRLVHGTDEIKLV 1223 (1392)
Q Consensus 1154 ~g~~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~----~--e~---~~~sieelA~~y~~~I~~~q~qp~gPy~L~ 1223 (1392)
.+.+++++++|+.+++.+.|.+++..|.. ...++.++ + .. ...+++++++.+.+.|++. ...++++|+
T Consensus 15 ~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l--~~~~~v~lv 92 (273)
T PLN02211 15 NRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSL--PENEKVILV 92 (273)
T ss_pred cCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhc--CCCCCEEEE
Confidence 34557899999999999999999999964 56777765 1 11 1269999999999888743 124689999
Q ss_pred eechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1224 GFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1224 G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
||||||++|.++|.+. ...+ .|+++++.++
T Consensus 93 GhS~GG~v~~~~a~~~---p~~v~~lv~~~~~~~ 123 (273)
T PLN02211 93 GHSAGGLSVTQAIHRF---PKKICLAVYVAATML 123 (273)
T ss_pred EECchHHHHHHHHHhC---hhheeEEEEeccccC
Confidence 9999999999998653 2345 7888877543
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.1e-07 Score=107.05 Aligned_cols=93 Identities=18% Similarity=0.215 Sum_probs=75.1
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCC---------CCCHHHHHHHHHHHHhhhccCCCCcEE
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNP---------PDTIPEMADSLLPHFKKRLVHGTDEIK 1221 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~---------~~sieelA~~y~~~I~~~q~qp~gPy~ 1221 (1392)
++||+++|+.+++...|..++..|.....|+.++ .+.+ ..+++++|+++.+.|... ..++++
T Consensus 29 ~~~vlllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l---~~~~~~ 105 (294)
T PLN02824 29 GPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV---VGDPAF 105 (294)
T ss_pred CCeEEEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh---cCCCeE
Confidence 4799999999999999999999998777777765 1111 358999999999988744 347899
Q ss_pred EEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1222 LVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1222 L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
|+||||||.||+++|.+-. +.+ .++++++.+
T Consensus 106 lvGhS~Gg~va~~~a~~~p---~~v~~lili~~~~ 137 (294)
T PLN02824 106 VICNSVGGVVGLQAAVDAP---ELVRGVMLINISL 137 (294)
T ss_pred EEEeCHHHHHHHHHHHhCh---hheeEEEEECCCc
Confidence 9999999999999997543 235 888998754
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.7e-07 Score=113.03 Aligned_cols=126 Identities=17% Similarity=0.197 Sum_probs=92.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCce-eeCCCc-------------cHHH
Q psy1119 563 MQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENI-GNSRDT-------------SFEQ 628 (1392)
Q Consensus 563 l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i-~~s~~~-------------~~~~ 628 (1392)
..+|++|+|.|+ |.+|++|++.|+.+||+|++++.++++++.+++ +|++++ +|..+. ++.+
T Consensus 162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes----lGA~~v~i~~~e~~~~~~gya~~~s~~~~~ 236 (509)
T PRK09424 162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES----MGAEFLELDFEEEGGSGDGYAKVMSEEFIK 236 (509)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCeEEEeccccccccccchhhhcchhHHH
Confidence 468999999955 999999999999999999999999999998876 677744 555332 2333
Q ss_pred HHHHH-cC-CCcceEEEecCchh------H-HHHHHhcccCCeEEEEEccccccc--CccccccccC-CCcEEEEEe
Q psy1119 629 LVMKR-TK-GRGVDLVLNSLAEE------K-LQASVRCLAQGGRFLEIGKFDLAN--NNMLGMEVFM-RETSFHGVM 693 (1392)
Q Consensus 629 ~i~~~-T~-g~GvDvVlds~~~~------~-l~~s~~~La~~Gr~v~iG~~~~~~--~~~l~~~~~~-k~~s~~g~~ 693 (1392)
..++. ++ .+++|+||+|.+.+ . .+.++++++++|+++.+|.....+ ........+. +++++.|+.
T Consensus 237 ~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~ 313 (509)
T PRK09424 237 AEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYT 313 (509)
T ss_pred HHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeC
Confidence 33333 22 15899999998642 4 489999999999999998642221 1111223454 789999975
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.4e-07 Score=105.67 Aligned_cols=89 Identities=21% Similarity=0.345 Sum_probs=67.9
Q ss_pred ceeEeecCCCccccccHHHHhhcCCceEEEecC----C---CCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHH
Q psy1119 1158 NTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD----H---TNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGM 1230 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~----~---e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~ 1230 (1392)
+||+++|+.+++...|.++...|.....|+.++ + .....+++++++...+ . ..++++|+||||||.
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~~----~---~~~~~~lvGhS~Gg~ 86 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQ----Q---APDKAIWLGWSLGGL 86 (256)
T ss_pred CeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCCCCCCHHHHHHHHHh----c---CCCCeEEEEECHHHH
Confidence 469999999999999999999998888888876 1 1123478887776543 2 125799999999999
Q ss_pred HHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1231 VALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1231 VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
+|+++|.+-. ..+ +|++++++|.
T Consensus 87 ia~~~a~~~p---~~v~~lili~~~~~ 110 (256)
T PRK10349 87 VASQIALTHP---ERVQALVTVASSPC 110 (256)
T ss_pred HHHHHHHhCh---HhhheEEEecCccc
Confidence 9999987422 335 8899988654
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=6.6e-07 Score=101.92 Aligned_cols=158 Identities=17% Similarity=0.166 Sum_probs=102.5
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCH-HHHHHHHHHHhhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTE-AGVVNLLTEANKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~-~~v~~l~~~~~~~ 859 (1392)
.++++||||+|++|+.+++.|+++|++ |+.+.|+..+ .. +.+. .+..+.++.+|+++. +++.+ .+
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~~-V~~~~R~~~~---~~---~~~~-~~~~~~~~~~Dl~d~~~~l~~------~~ 82 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGFA-VKAGVRDVDK---AK---TSLP-QDPSLQIVRADVTEGSDKLVE------AI 82 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCE-EEEEecCHHH---HH---Hhcc-cCCceEEEEeeCCCCHHHHHH------Hh
Confidence 478999999999999999999999987 7777887421 11 1111 233577889999983 33322 23
Q ss_pred -CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc---CCCCChhHHHHH
Q psy1119 860 -GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR---GNAGQTNYGMAN 935 (1392)
Q Consensus 860 -g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~---G~~gq~~Yaaan 935 (1392)
..+|.|||++|...... .. ..+..+..|+.++.+++... ..++||++||++..- +.+....|.+.|
T Consensus 83 ~~~~d~vi~~~g~~~~~~--~~------~~~~~n~~~~~~ll~a~~~~--~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~ 152 (251)
T PLN00141 83 GDDSDAVICATGFRRSFD--PF------APWKVDNFGTVNLVEACRKA--GVTRFILVSSILVNGAAMGQILNPAYIFLN 152 (251)
T ss_pred hcCCCEEEECCCCCcCCC--CC------CceeeehHHHHHHHHHHHHc--CCCEEEEEccccccCCCcccccCcchhHHH
Confidence 26999999998643211 11 11346677888888877543 457899999986421 222234466666
Q ss_pred HHHHHHHH------HHHHcCCCeEEEEccccCc
Q psy1119 936 SIMERICE------ARRAEGLPGLAVEWGAVGE 962 (1392)
Q Consensus 936 a~ld~la~------~r~~~Glp~~ai~~g~~~~ 962 (1392)
.+...+.. +.+..|++...+..|.+.+
T Consensus 153 ~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~ 185 (251)
T PLN00141 153 LFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTN 185 (251)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEECCCccC
Confidence 54433221 2345689999999887643
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=98.65 E-value=7.2e-07 Score=107.53 Aligned_cols=164 Identities=15% Similarity=0.163 Sum_probs=113.9
Q ss_pred cccCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Q psy1119 776 YYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 776 ~~~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
.+...+++++||||+|-||.+++++|.++|.+ |+.++|..... . ......+..+.+|+++.+.+..+++
T Consensus 16 ~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~-V~~v~r~~~~~------~---~~~~~~~~~~~~Dl~d~~~~~~~~~- 84 (370)
T PLN02695 16 YWPSEKLRICITGAGGFIASHIARRLKAEGHY-IIASDWKKNEH------M---SEDMFCHEFHLVDLRVMENCLKVTK- 84 (370)
T ss_pred CCCCCCCEEEEECCccHHHHHHHHHHHhCCCE-EEEEEeccccc------c---ccccccceEEECCCCCHHHHHHHHh-
Confidence 34557789999999999999999999999986 77777753211 0 0111124567899999887766553
Q ss_pred HhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc------------
Q psy1119 856 ANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR------------ 923 (1392)
Q Consensus 856 ~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~------------ 923 (1392)
.+|.|||+|+......+.. .+....+..|+.++.+|.++++.. ....||++||.+..-
T Consensus 85 -----~~D~Vih~Aa~~~~~~~~~---~~~~~~~~~N~~~t~nll~aa~~~--~vk~~V~~SS~~vYg~~~~~~~~~~~~ 154 (370)
T PLN02695 85 -----GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAARIN--GVKRFFYASSACIYPEFKQLETNVSLK 154 (370)
T ss_pred -----CCCEEEEcccccCCccccc---cCchhhHHHHHHHHHHHHHHHHHh--CCCEEEEeCchhhcCCccccCcCCCcC
Confidence 4799999998543221111 112334567899999998887653 456899999974221
Q ss_pred -----CCCCChhHHHHHHHHHHHHHHHH-HcCCCeEEEEcccc
Q psy1119 924 -----GNAGQTNYGMANSIMERICEARR-AEGLPGLAVEWGAV 960 (1392)
Q Consensus 924 -----G~~gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~ 960 (1392)
+....+.|+.+|...+.+++... +.|++.+.+..+.+
T Consensus 155 E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~v 197 (370)
T PLN02695 155 ESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNI 197 (370)
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCc
Confidence 11234589999999999987744 45999888877654
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.65 E-value=6.2e-07 Score=99.71 Aligned_cols=155 Identities=15% Similarity=0.202 Sum_probs=112.2
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
++|||||+|=||..++..|.+.|...+|+-.-+. ..... +...+ +.++.+|+.|.+.+.+++++- +|
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~-g~~~~---v~~~~-----~~f~~gDi~D~~~L~~vf~~~----~i 68 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSN-GHKIA---LLKLQ-----FKFYEGDLLDRALLTAVFEEN----KI 68 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCC-CCHHH---hhhcc-----CceEEeccccHHHHHHHHHhc----CC
Confidence 6899999999999999999999998555533332 11111 21111 577899999999999998874 89
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCC------------hh
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQ------------TN 930 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq------------~~ 930 (1392)
|+|||.|+...-+- |.+.=.+-+.-|+.||.+|.++.+.. .-.. +.|||.++..|.|.+ ..
T Consensus 69 daViHFAa~~~VgE----Sv~~Pl~Yy~NNv~gTl~Ll~am~~~--gv~~-~vFSStAavYG~p~~~PI~E~~~~~p~NP 141 (329)
T COG1087 69 DAVVHFAASISVGE----SVQNPLKYYDNNVVGTLNLIEAMLQT--GVKK-FIFSSTAAVYGEPTTSPISETSPLAPINP 141 (329)
T ss_pred CEEEECccccccch----hhhCHHHHHhhchHhHHHHHHHHHHh--CCCE-EEEecchhhcCCCCCcccCCCCCCCCCCc
Confidence 99999998543221 22333456788999999999987664 2334 457888888887765 47
Q ss_pred HHHHHHHHHHHHHHH-HHcCCCeEEEEc
Q psy1119 931 YGMANSIMERICEAR-RAEGLPGLAVEW 957 (1392)
Q Consensus 931 Yaaana~ld~la~~r-~~~Glp~~ai~~ 957 (1392)
|+.+|..++.+-+.. ++.++..+++.+
T Consensus 142 YG~sKlm~E~iL~d~~~a~~~~~v~LRY 169 (329)
T COG1087 142 YGRSKLMSEEILRDAAKANPFKVVILRY 169 (329)
T ss_pred chhHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 999999999887754 445777666543
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=4.6e-07 Score=106.40 Aligned_cols=153 Identities=14% Similarity=0.170 Sum_probs=103.8
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH---hhcC
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA---NKLG 860 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~---~~~g 860 (1392)
++||||+|-||..+++.|+++|.+.++++ |+...... . .. ...+|++|..+.+.+++.+ ..++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~-~~~~~~~~---~-~~---------~~~~~~~d~~~~~~~~~~~~~~~~~~ 67 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVV-DNLKDGTK---F-VN---------LVDLDIADYMDKEDFLAQIMAGDDFG 67 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEe-cCCCcchH---H-Hh---------hhhhhhhhhhhHHHHHHHHhcccccC
Confidence 69999999999999999999998645544 43221110 0 01 1235777766666666554 2346
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC------------CC
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA------------GQ 928 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~------------gq 928 (1392)
.+|.|||+|+..... +... ...++.|+.++.+|-+++... .. .||++||.+.. |.. ..
T Consensus 68 ~~d~Vih~A~~~~~~---~~~~---~~~~~~n~~~t~~ll~~~~~~--~~-~~i~~SS~~vy-g~~~~~~~~E~~~~~p~ 137 (308)
T PRK11150 68 DIEAIFHEGACSSTT---EWDG---KYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATY-GGRTDDFIEEREYEKPL 137 (308)
T ss_pred CccEEEECceecCCc---CCCh---HHHHHHHHHHHHHHHHHHHHc--CC-cEEEEcchHHh-CcCCCCCCccCCCCCCC
Confidence 799999999864332 1222 246889999999999888654 23 58999997532 321 23
Q ss_pred hhHHHHHHHHHHHHHHHH-HcCCCeEEEEcccc
Q psy1119 929 TNYGMANSIMERICEARR-AEGLPGLAVEWGAV 960 (1392)
Q Consensus 929 ~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~ 960 (1392)
+.|+.+|.+.+.+++.-. ..+++.+.+..+.+
T Consensus 138 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v 170 (308)
T PRK11150 138 NVYGYSKFLFDEYVRQILPEANSQICGFRYFNV 170 (308)
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeee
Confidence 579999999998877643 45888887776544
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=98.63 E-value=4.8e-07 Score=101.11 Aligned_cols=200 Identities=13% Similarity=0.189 Sum_probs=113.0
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecC----C----CCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechh
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD----H----TNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFG 1228 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~----~----e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~G 1228 (1392)
+++|+++|+.|++...|.+++..|.....++.++ + .....+++++++.+.+.++.. ...++.++|||||
T Consensus 13 ~~~li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~---~~~~v~liG~S~G 89 (251)
T TIGR02427 13 APVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL---GIERAVFCGLSLG 89 (251)
T ss_pred CCeEEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCceEEEEeCch
Confidence 4678999999999999999999998777777765 1 112348999999888888743 3458999999999
Q ss_pred HHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccc-----cC--CCCChHHHHHHHH-hcCCccc-cCCHHHHHHHHHH--
Q psy1119 1229 GMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTS-----LR--KLPDWNAKLNYFL-DLMPEDA-THSRTYQRNLAHA-- 1296 (1392)
Q Consensus 1229 g~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~-----l~--~~~~~~~~l~~~~-~~~~~~~-~~~~~~l~~~~~~-- 1296 (1392)
|.+|.++|.+-. ..+ .++++++.+...... .. ............. ..+.... .........+...
T Consensus 90 g~~a~~~a~~~p---~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (251)
T TIGR02427 90 GLIAQGLAARRP---DRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLDLYRNMLV 166 (251)
T ss_pred HHHHHHHHHHCH---HHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHHHHHHHHH
Confidence 999999987532 224 666776543211000 00 0000011111111 0011000 0011111111100
Q ss_pred ------HHHHHHhhccccC-CCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEc-cCccccccChHH
Q psy1119 1297 ------AYKRITSILKYTD-PKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVD-GNHFTVLDNIKS 1363 (1392)
Q Consensus 1297 ------~~~~~~~~~~y~~-~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~-G~H~~ml~~~~~ 1363 (1392)
+.........+.. ....++++|++++.+++|. ...+....+.+... ..+++.++ |+|+.+++++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~ 241 (251)
T TIGR02427 167 RQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP-GARFAEIRGAGHIPCVEQPEA 241 (251)
T ss_pred hcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC-CceEEEECCCCCcccccChHH
Confidence 0011111111111 1123578999999999887 44433334555443 35788888 899999988743
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=98.62 E-value=3.5e-07 Score=104.00 Aligned_cols=161 Identities=16% Similarity=0.172 Sum_probs=99.6
Q ss_pred EEcCcchHHHHHHHHHHHhCC-ceEEEecCCCcccHHHHHHHHHHhcC----------CceEEEEeccCCCHH------H
Q psy1119 786 ICGGLGGFGLELADWLVLRGA-RKLVLTSRSGVKNGYQALRIKIWKSY----------DVQVLISTDDITTEA------G 848 (1392)
Q Consensus 786 ItGG~gGiG~~lA~~La~~GA-r~lvl~sRs~~~~~~~~~~~~~l~~~----------G~~v~~~~~Dv~~~~------~ 848 (1392)
|||++|=||..+.+.|++++- .+|+.+.|+.......++..+.++.. ..++.++.+|++++. +
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999986 26888889764433333333333322 458999999999853 3
Q ss_pred HHHHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC--
Q psy1119 849 VVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA-- 926 (1392)
Q Consensus 849 v~~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~-- 926 (1392)
.+.+.+ .+|.|||||+...-.. .+++..++||.|+.+|.+.+... +. ..|+++|| +...+..
T Consensus 81 ~~~L~~------~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la~~~-~~-~~~~~iST-a~v~~~~~~ 144 (249)
T PF07993_consen 81 YQELAE------EVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLAAQG-KR-KRFHYIST-AYVAGSRPG 144 (249)
T ss_dssp HHHHHH------H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHTSS-S----EEEEEE-GGGTTS-TT
T ss_pred hhcccc------ccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHHHhc-cC-cceEEecc-ccccCCCCC
Confidence 333322 5899999998653211 34456789999999999987642 22 38999999 3222211
Q ss_pred -------------------CChhHHHHHHHHHHHHHHHHHc-CCCeEEEEccccCc
Q psy1119 927 -------------------GQTNYGMANSIMERICEARRAE-GLPGLAVEWGAVGE 962 (1392)
Q Consensus 927 -------------------gq~~Yaaana~ld~la~~r~~~-Glp~~ai~~g~~~~ 962 (1392)
....|..+|..-|.+.+...++ |+|+..+..|.+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 145 TIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG 200 (249)
T ss_dssp T--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-
T ss_pred cccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc
Confidence 1247999999999999988877 99999998887754
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.2e-06 Score=105.36 Aligned_cols=94 Identities=17% Similarity=0.217 Sum_probs=73.8
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCC---CCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNP---PDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~---~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
++||+|+|+.+++...|.++...|.....|+.++ ...+ ..+++++++.+.+.+... ...|++|+||||
T Consensus 88 gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l---~~~~~~lvGhS~ 164 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV---VQKPTVLIGNSV 164 (360)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh---cCCCeEEEEECH
Confidence 4799999999999999999999998778888876 1112 348899999998888743 346899999999
Q ss_pred hHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1228 GGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
||.+|+++|.+. ..+.+ .|+|+++.+
T Consensus 165 Gg~ia~~~a~~~--~P~rV~~LVLi~~~~ 191 (360)
T PLN02679 165 GSLACVIAASES--TRDLVRGLVLLNCAG 191 (360)
T ss_pred HHHHHHHHHHhc--ChhhcCEEEEECCcc
Confidence 999999887532 22345 889998754
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.62 E-value=7.8e-07 Score=110.74 Aligned_cols=170 Identities=15% Similarity=0.151 Sum_probs=118.0
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhC--CceEEEecCCCcccHHHHHHHHHH---------h-cCC--------ceEE
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRG--ARKLVLTSRSGVKNGYQALRIKIW---------K-SYD--------VQVL 837 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~G--Ar~lvl~sRs~~~~~~~~~~~~~l---------~-~~G--------~~v~ 837 (1392)
|-.+++++||||+|=||..+++.|.+.+ .++|+++.|+.......+....++ + ..+ .++.
T Consensus 8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~ 87 (491)
T PLN02996 8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT 87 (491)
T ss_pred HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence 5678999999999999999999998764 457888888764332222211111 1 111 4688
Q ss_pred EEeccCCC-------HHHHHHHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCC
Q psy1119 838 ISTDDITT-------EAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTL 910 (1392)
Q Consensus 838 ~~~~Dv~~-------~~~v~~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l 910 (1392)
++.+|++. .+.++++++ .+|.|||+|+.... . ++....++.|+.|+.+|.+++... ...
T Consensus 88 ~i~GDl~~~~LGLs~~~~~~~l~~------~vD~ViH~AA~v~~---~----~~~~~~~~~Nv~gt~~ll~~a~~~-~~~ 153 (491)
T PLN02996 88 PVPGDISYDDLGVKDSNLREEMWK------EIDIVVNLAATTNF---D----ERYDVALGINTLGALNVLNFAKKC-VKV 153 (491)
T ss_pred EEecccCCcCCCCChHHHHHHHHh------CCCEEEECccccCC---c----CCHHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 99999984 344444443 58999999986542 1 245678899999999998887642 345
Q ss_pred CeEEEecccccccCCCC--------------------------------------------------------------C
Q psy1119 911 GQFVVFSSVSCGRGNAG--------------------------------------------------------------Q 928 (1392)
Q Consensus 911 ~~fV~~SS~s~~~G~~g--------------------------------------------------------------q 928 (1392)
..||++||.+..-...| .
T Consensus 154 k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 233 (491)
T PLN02996 154 KMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWP 233 (491)
T ss_pred CeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCC
Confidence 78999998764311110 1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCeEEEEccccCc
Q psy1119 929 TNYGMANSIMERICEARRAEGLPGLAVEWGAVGE 962 (1392)
Q Consensus 929 ~~Yaaana~ld~la~~r~~~Glp~~ai~~g~~~~ 962 (1392)
..|+.+|+..+.+++.. ..|+|.+.+....+.+
T Consensus 234 n~Y~~TK~~aE~lv~~~-~~~lpv~i~RP~~V~G 266 (491)
T PLN02996 234 NTYVFTKAMGEMLLGNF-KENLPLVIIRPTMITS 266 (491)
T ss_pred CchHhhHHHHHHHHHHh-cCCCCEEEECCCEecc
Confidence 24999999999999754 3589988777666543
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=98.61 E-value=4.5e-08 Score=107.39 Aligned_cols=196 Identities=18% Similarity=0.279 Sum_probs=114.5
Q ss_pred eEeecCCCccccccHHHHhhcCCceEEEecC------CCC----CCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhH
Q psy1119 1160 IFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTN----PPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGG 1229 (1392)
Q Consensus 1160 LF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~----~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg 1229 (1392)
|+|+|+.+++...|.++++.|.....++.++ ... ...++++.++.+.+.|+.. ..+|+.|+|||+||
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvG~S~Gg 77 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL---GIKKVILVGHSMGG 77 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT---TTSSEEEEEETHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc---cccccccccccccc
Confidence 6899999999999999999997778888875 111 2468999999998888754 24689999999999
Q ss_pred HHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhc-------CCc----cccCC---HHHHHHHH
Q psy1119 1230 MVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDL-------MPE----DATHS---RTYQRNLA 1294 (1392)
Q Consensus 1230 ~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~-------~~~----~~~~~---~~~l~~~~ 1294 (1392)
.+|..+|.+.. ..+ .++++++.+....... .......+..+... +.. ..... .+.+....
T Consensus 78 ~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (228)
T PF12697_consen 78 MIALRLAARYP---DRVKGLVLLSPPPPLPDSPS--RSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSR 152 (228)
T ss_dssp HHHHHHHHHSG---GGEEEEEEESESSSHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccccccccccc---cccccceeeccccccccccc--ccccchhhhhhhhccccccccccccccccccccccccccccccc
Confidence 99999997633 245 7888887653211000 00000111111100 000 00000 11111111
Q ss_pred HHHHHHHHh---hccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEc-cCccccccChHHHH
Q psy1119 1295 HAAYKRITS---ILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVD-GNHFTVLDNIKSAQ 1365 (1392)
Q Consensus 1295 ~~~~~~~~~---~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~-G~H~~ml~~~~~~~ 1365 (1392)
..+...++. ...+. ...+.+++|++++.+++|. ........+.+.. ..++++.++ ++|+-++++|....
T Consensus 153 ~~~~~~~~~~~~~~~~~-~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~ 226 (228)
T PF12697_consen 153 RALAEYLRSNLWQADLS-EALPRIKVPVLVIHGEDDPIVPPESAEELADKL-PNAELVVIPGAGHFLFLEQPDEVA 226 (228)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS-TTEEEEEETTSSSTHHHHSHHHHH
T ss_pred ccccccccccccccccc-ccccccCCCeEEeecCCCCCCCHHHHHHHHHHC-CCCEEEEECCCCCccHHHCHHHHh
Confidence 111111110 11111 1123578999999999887 3322333344333 468999999 79999999887543
|
... |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=98.60 E-value=6.8e-07 Score=103.75 Aligned_cols=138 Identities=22% Similarity=0.200 Sum_probs=105.3
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCcc
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVD 863 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~ 863 (1392)
++||||+|.||..+++.|.++|.+ |+.++|+ .+|+.+.++++++++.. .+|
T Consensus 2 ilv~G~tG~iG~~l~~~l~~~g~~-v~~~~r~------------------------~~d~~~~~~~~~~~~~~----~~d 52 (287)
T TIGR01214 2 ILITGANGQLGRELVQQLSPEGRV-VVALTSS------------------------QLDLTDPEALERLLRAI----RPD 52 (287)
T ss_pred EEEEcCCCHHHHHHHHHHHhcCCE-EEEeCCc------------------------ccCCCCHHHHHHHHHhC----CCC
Confidence 699999999999999999999986 7777764 47999999999888653 579
Q ss_pred EEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC-----------CCChhHH
Q psy1119 864 GIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN-----------AGQTNYG 932 (1392)
Q Consensus 864 gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~-----------~gq~~Ya 932 (1392)
.|||+|+...... ........+..|+.|+.++.+++... . ..||++||.+..-+. .....|+
T Consensus 53 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~ 125 (287)
T TIGR01214 53 AVVNTAAYTDVDG----AESDPEKAFAVNALAPQNLARAAARH--G-ARLVHISTDYVFDGEGKRPYREDDATNPLNVYG 125 (287)
T ss_pred EEEECCccccccc----cccCHHHHHHHHHHHHHHHHHHHHHc--C-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchhh
Confidence 9999998653211 12235567789999999998887653 2 368999996533221 1346799
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEEcccc
Q psy1119 933 MANSIMERICEARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 933 aana~ld~la~~r~~~Glp~~ai~~g~~ 960 (1392)
.+|...+.+++.. +.|.+.+..+.+
T Consensus 126 ~~K~~~E~~~~~~---~~~~~ilR~~~v 150 (287)
T TIGR01214 126 QSKLAGEQAIRAA---GPNALIVRTSWL 150 (287)
T ss_pred HHHHHHHHHHHHh---CCCeEEEEeeec
Confidence 9999999998753 778888877765
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=5.1e-07 Score=105.31 Aligned_cols=94 Identities=17% Similarity=0.312 Sum_probs=75.3
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCC--CCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNP--PDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~--~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
|.++||+|+|+.+++...|..+++.|.....|+.++ .+.+ ..+++++|+++.+.++.. ...|.+|+|||
T Consensus 25 G~g~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l---~~~~~~lvGhS 101 (295)
T PRK03592 25 GEGDPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDAL---GLDDVVLVGHD 101 (295)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCeEEEEEC
Confidence 456899999999999999999999998777888875 1122 248999999998888743 35689999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
|||.||+.+|.+-- ..+ .|+++++.
T Consensus 102 ~Gg~ia~~~a~~~p---~~v~~lil~~~~ 127 (295)
T PRK03592 102 WGSALGFDWAARHP---DRVRGIAFMEAI 127 (295)
T ss_pred HHHHHHHHHHHhCh---hheeEEEEECCC
Confidence 99999999998643 345 78899873
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.6e-06 Score=105.49 Aligned_cols=96 Identities=25% Similarity=0.367 Sum_probs=64.7
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCCC---CCHHHHHHHHHHHHhhhc-cCCCCcEEEEee
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNPP---DTIPEMADSLLPHFKKRL-VHGTDEIKLVGF 1225 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~~---~sieelA~~y~~~I~~~q-~qp~gPy~L~G~ 1225 (1392)
.++||+|+|+.+++...|.+.+..|...+.|+.++ .+.+. .+.++..+.+++.+.... .....|++|+||
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGh 183 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGH 183 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 45899999999998888888778887777888876 12121 233444444443332110 113458999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
||||.+|.++|.+.. ..+ .++++++.
T Consensus 184 S~GG~la~~~a~~~p---~~v~~lvl~~p~ 210 (402)
T PLN02894 184 SFGGYVAAKYALKHP---EHVQHLILVGPA 210 (402)
T ss_pred CHHHHHHHHHHHhCc---hhhcEEEEECCc
Confidence 999999999987642 234 78888754
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.56 E-value=8.3e-07 Score=104.23 Aligned_cols=156 Identities=23% Similarity=0.202 Sum_probs=110.7
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCcc
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVD 863 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~ 863 (1392)
+|||||+|=||..++++|.++|.+ |+.+.|+........ ..+..+.+|+++.+.+..+.+.. + |
T Consensus 3 ILVtG~tGfiG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~----------~~~~~~~~d~~~~~~~~~~~~~~----~-d 66 (314)
T COG0451 3 ILVTGGAGFIGSHLVERLLAAGHD-VRGLDRLRDGLDPLL----------SGVEFVVLDLTDRDLVDELAKGV----P-D 66 (314)
T ss_pred EEEEcCcccHHHHHHHHHHhCCCe-EEEEeCCCccccccc----------cccceeeecccchHHHHHHHhcC----C-C
Confidence 899999999999999999999998 777777643221110 35677889999985554444322 2 9
Q ss_pred EEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC----CCCh---------h
Q psy1119 864 GIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN----AGQT---------N 930 (1392)
Q Consensus 864 gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~----~gq~---------~ 930 (1392)
.|||+|+......... + .....+.+|+.|+.++.++++. .....||+.||.+...+. +-.- .
T Consensus 67 ~vih~aa~~~~~~~~~-~--~~~~~~~~nv~gt~~ll~aa~~--~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~ 141 (314)
T COG0451 67 AVIHLAAQSSVPDSNA-S--DPAEFLDVNVDGTLNLLEAARA--AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNP 141 (314)
T ss_pred EEEEccccCchhhhhh-h--CHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCH
Confidence 9999998654321111 0 3446789999999999998865 355788886665544432 1111 3
Q ss_pred HHHHHHHHHHHHHHHHH-cCCCeEEEEcccc
Q psy1119 931 YGMANSIMERICEARRA-EGLPGLAVEWGAV 960 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~-~Glp~~ai~~g~~ 960 (1392)
|+.+|...+.++..-.. .|++.+.+..+.+
T Consensus 142 Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~v 172 (314)
T COG0451 142 YGVSKLAAEQLLRAYARLYGLPVVILRPFNV 172 (314)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEEeeeee
Confidence 99999999999887655 5899988888744
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=98.52 E-value=7.7e-07 Score=104.24 Aligned_cols=143 Identities=15% Similarity=0.120 Sum_probs=102.3
Q ss_pred EEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCccE
Q psy1119 785 IICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVDG 864 (1392)
Q Consensus 785 lItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~g 864 (1392)
|||||+|-||..+++.|.++|..++++.+| ..+|+++.+++.++++.. .+|.
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~------------------------~~~Dl~~~~~l~~~~~~~----~~d~ 52 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH------------------------KELDLTRQADVEAFFAKE----KPTY 52 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc------------------------ccCCCCCHHHHHHHHhcc----CCCE
Confidence 699999999999999999999875543222 147999999988877652 5799
Q ss_pred EEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC--------------C---C
Q psy1119 865 IFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN--------------A---G 927 (1392)
Q Consensus 865 vi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~--------------~---g 927 (1392)
|||+|+.... .... .++....++.|+.|+.+|.+++... ....||++||..- .|. + .
T Consensus 53 Vih~A~~~~~-~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~i~~SS~~v-yg~~~~~~~~E~~~~~~~~~p~ 126 (306)
T PLN02725 53 VILAAAKVGG-IHAN--MTYPADFIRENLQIQTNVIDAAYRH--GVKKLLFLGSSCI-YPKFAPQPIPETALLTGPPEPT 126 (306)
T ss_pred EEEeeeeecc-cchh--hhCcHHHHHHHhHHHHHHHHHHHHc--CCCeEEEeCceee-cCCCCCCCCCHHHhccCCCCCC
Confidence 9999986421 1111 1122345778999999999888654 4568999999653 221 1 1
Q ss_pred ChhHHHHHHHHHHHHHH-HHHcCCCeEEEEccccC
Q psy1119 928 QTNYGMANSIMERICEA-RRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 928 q~~Yaaana~ld~la~~-r~~~Glp~~ai~~g~~~ 961 (1392)
...|+.+|...+.+++. ++..+++.+.+..+.+-
T Consensus 127 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vy 161 (306)
T PLN02725 127 NEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLY 161 (306)
T ss_pred cchHHHHHHHHHHHHHHHHHHhCCCEEEEEeccee
Confidence 12399999999988764 44558998888876553
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=98.52 E-value=8.3e-07 Score=106.26 Aligned_cols=175 Identities=13% Similarity=0.090 Sum_probs=117.7
Q ss_pred HHHHHHhc-CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHH
Q psy1119 554 VYAMFICG-QMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMK 632 (1392)
Q Consensus 554 ~~aL~~~a-~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~ 632 (1392)
+.++.+.- ...+|++|+|.| .|.+|+.+++.|+.+|++|+++..++.|.+.+++ +|.+.+ + ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~----~G~~~~-~-----~~e~v-- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAAM----EGYEVM-T-----MEEAV-- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh----cCCEEc-c-----HHHHH--
Confidence 34444433 346899999995 5999999999999999999998888888877765 455322 1 22222
Q ss_pred HcCCCcceEEEecCchh-HHHHH-HhcccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhhhhhCHHHHHHHH
Q psy1119 633 RTKGRGVDLVLNSLAEE-KLQAS-VRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFFAEQEWKMSLQ 709 (1392)
Q Consensus 633 ~T~g~GvDvVlds~~~~-~l~~s-~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~~~~~~~~~~~ 709 (1392)
+++|+|+++.+.. .+... +++++++|+++.+|..+. .++. .+..+++++.++....... .+..
T Consensus 256 ----~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~~~----eId~~~L~~~el~i~g~~~~~~~~---~~~~--- 321 (413)
T cd00401 256 ----KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHFDV----EIDVKGLKENAVEVVNIKPQVDRY---ELPD--- 321 (413)
T ss_pred ----cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCCCC----ccCHHHHHhhccEEEEccCCcceE---EcCC---
Confidence 3689999998754 46655 999999999999996532 1222 3456788888775431000 0000
Q ss_pred HHHHHHHHcCCC---CCcceee-----eccc-cHHHHHHHHHcCCcc-ceEEEEec
Q psy1119 710 KALQKAIDAGAV---QPLVRTI-----FPED-KVEEAFRYMAAGKHI-GKVIIKIR 755 (1392)
Q Consensus 710 ~~~~~~l~~g~l---~pl~~~v-----f~l~-ev~eA~~~l~~g~~~-GKvVI~~~ 755 (1392)
.....++.+|.+ .+...+. |+++ |+.+||+.+.++... -|+++.++
T Consensus 322 g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 322 GRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred cchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 023356788877 4456666 8888 999999998876532 35555544
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.9e-06 Score=100.91 Aligned_cols=93 Identities=16% Similarity=0.289 Sum_probs=72.1
Q ss_pred CCceeEeecCCCccccccHHHHhhcCC-ceEEEecC------CCCC----CCCHHHHHHHHHHHHhhhccCCCCcEEEEe
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD------HTNP----PDTIPEMADSLLPHFKKRLVHGTDEIKLVG 1224 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~------~e~~----~~sieelA~~y~~~I~~~q~qp~gPy~L~G 1224 (1392)
.++||+|+|+.+++...|..+++.|.. ...|+.++ ...+ .-+++++|+.+.+.|... ...|+.|+|
T Consensus 45 ~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l---~~~~v~lvG 121 (302)
T PRK00870 45 DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL---DLTDVTLVC 121 (302)
T ss_pred CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc---CCCCEEEEE
Confidence 357999999999999999999999974 57777775 1121 247899999988888643 346899999
Q ss_pred echhHHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1225 FSFGGMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1225 ~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
|||||.+|..+|.+- ...+ .++++++.
T Consensus 122 hS~Gg~ia~~~a~~~---p~~v~~lvl~~~~ 149 (302)
T PRK00870 122 QDWGGLIGLRLAAEH---PDRFARLVVANTG 149 (302)
T ss_pred EChHHHHHHHHHHhC---hhheeEEEEeCCC
Confidence 999999999999753 2335 78888864
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.9e-06 Score=112.16 Aligned_cols=167 Identities=16% Similarity=0.142 Sum_probs=114.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhC--CceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRG--ARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~G--Ar~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
.++++|||||+|-||..+++.|+++| .+ |+.++|...... ... +... .....+.++.+|++|.+.+.+++..
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~-V~~~d~~~~~~~-~~~-l~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~-- 78 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYK-IVVLDKLDYCSN-LKN-LNPS-KSSPNFKFVKGDIASADLVNYLLIT-- 78 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCE-EEEEeCCCccch-hhh-hhhc-ccCCCeEEEECCCCChHHHHHHHhh--
Confidence 35789999999999999999999984 54 666676421111 111 1111 1123577889999999887765532
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC-----------
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA----------- 926 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~----------- 926 (1392)
..+|.|||+|+..... .+.++-...++.|+.|+.+|.++++.. .....||++||.... |..
T Consensus 79 --~~~D~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~vkr~I~~SS~~vy-g~~~~~~~~~~~E~ 150 (668)
T PLN02260 79 --EGIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVY-GETDEDADVGNHEA 150 (668)
T ss_pred --cCCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEcchHHh-CCCccccccCcccc
Confidence 3699999999865321 111223456788999999998887653 234689999997532 211
Q ss_pred ----CChhHHHHHHHHHHHHHHH-HHcCCCeEEEEcccc
Q psy1119 927 ----GQTNYGMANSIMERICEAR-RAEGLPGLAVEWGAV 960 (1392)
Q Consensus 927 ----gq~~Yaaana~ld~la~~r-~~~Glp~~ai~~g~~ 960 (1392)
....|+.+|...+.+++.. +..|+|.+.+..+.+
T Consensus 151 ~~~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~V 189 (668)
T PLN02260 151 SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNV 189 (668)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccc
Confidence 2356999999999998754 446999887776544
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.3e-06 Score=101.08 Aligned_cols=144 Identities=13% Similarity=0.136 Sum_probs=104.2
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
+++||||+|-+|..+++.|.++|.+ |..++|+... . ..+...| +.++.+|++|++++.++++ .+
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~-V~~l~R~~~~---~----~~l~~~~--v~~v~~Dl~d~~~l~~al~------g~ 65 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQ-VRCLVRNLRK---A----SFLKEWG--AELVYGDLSLPETLPPSFK------GV 65 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCe-EEEEEcChHH---h----hhHhhcC--CEEEECCCCCHHHHHHHHC------CC
Confidence 5899999999999999999999986 7778887421 1 1122234 5678899999998876664 47
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHHHH
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERIC 942 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~la 942 (1392)
|.|||+++.... +. ....+.++.|+.++.++++.. ...+||++||..+. ..+.+.|..+|...+.+.
T Consensus 66 d~Vi~~~~~~~~------~~---~~~~~~~~~~~~~l~~aa~~~--gvkr~I~~Ss~~~~--~~~~~~~~~~K~~~e~~l 132 (317)
T CHL00194 66 TAIIDASTSRPS------DL---YNAKQIDWDGKLALIEAAKAA--KIKRFIFFSILNAE--QYPYIPLMKLKSDIEQKL 132 (317)
T ss_pred CEEEECCCCCCC------Cc---cchhhhhHHHHHHHHHHHHHc--CCCEEEEecccccc--ccCCChHHHHHHHHHHHH
Confidence 999999864321 11 123445788999998887653 45799999996432 124567888998888765
Q ss_pred HHHHHcCCCeEEEEcc
Q psy1119 943 EARRAEGLPGLAVEWG 958 (1392)
Q Consensus 943 ~~r~~~Glp~~ai~~g 958 (1392)
+ ..|++.+.+..+
T Consensus 133 ~---~~~l~~tilRp~ 145 (317)
T CHL00194 133 K---KSGIPYTIFRLA 145 (317)
T ss_pred H---HcCCCeEEEeec
Confidence 4 568888877765
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.9e-06 Score=93.87 Aligned_cols=163 Identities=15% Similarity=0.147 Sum_probs=113.3
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCc-eEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGAR-KLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr-~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
+++|||||.|=||....+.+.++... +|+.+..=. =....+.++.+.. ..+..++++||+|.+.+.+++++-
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLT--YAgn~~~l~~~~~-~~~~~fv~~DI~D~~~v~~~~~~~---- 73 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLT--YAGNLENLADVED-SPRYRFVQGDICDRELVDRLFKEY---- 73 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEeccc--ccCCHHHHHhhhc-CCCceEEeccccCHHHHHHHHHhc----
Confidence 36899999999999999999998764 466655410 0001112222222 247889999999999999888763
Q ss_pred CccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccc--ccccC-----------CC
Q psy1119 861 PVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSV--SCGRG-----------NA 926 (1392)
Q Consensus 861 ~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~--s~~~G-----------~~ 926 (1392)
.+|.|+|.|.-.. |..+ +.=..-+++|+.||.+|-++++.+... =.|+.+|.- -|-.+ -.
T Consensus 74 ~~D~VvhfAAESHVDRSI-----~~P~~Fi~TNv~GT~~LLEaar~~~~~-frf~HISTDEVYG~l~~~~~~FtE~tp~~ 147 (340)
T COG1088 74 QPDAVVHFAAESHVDRSI-----DGPAPFIQTNVVGTYTLLEAARKYWGK-FRFHHISTDEVYGDLGLDDDAFTETTPYN 147 (340)
T ss_pred CCCeEEEechhccccccc-----cChhhhhhcchHHHHHHHHHHHHhccc-ceEEEeccccccccccCCCCCcccCCCCC
Confidence 6999999997432 3333 333445889999999999999876321 258888762 22222 23
Q ss_pred CChhHHHHHHHHHHHHHHH-HHcCCCeEEEEc
Q psy1119 927 GQTNYGMANSIMERICEAR-RAEGLPGLAVEW 957 (1392)
Q Consensus 927 gq~~Yaaana~ld~la~~r-~~~Glp~~ai~~ 957 (1392)
..+.|+|+||+-|.|++.. +.-|+|++-.+.
T Consensus 148 PsSPYSASKAasD~lVray~~TYglp~~Itrc 179 (340)
T COG1088 148 PSSPYSASKAASDLLVRAYVRTYGLPATITRC 179 (340)
T ss_pred CCCCcchhhhhHHHHHHHHHHHcCCceEEecC
Confidence 4578999999999999965 455999875544
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.8e-06 Score=97.31 Aligned_cols=93 Identities=22% Similarity=0.462 Sum_probs=72.1
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecC----C--C---CCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD----H--T---NPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~----~--e---~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
+++|+++|+.+|+...|..++..|.....++.++ + . ....++++.++.+.+.++.. ..+++.|+||||
T Consensus 13 ~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~---~~~~~~l~G~S~ 89 (257)
T TIGR03611 13 APVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL---NIERFHFVGHAL 89 (257)
T ss_pred CCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh---CCCcEEEEEech
Confidence 4789999999999999999999888778888876 1 1 12357899999888888643 346799999999
Q ss_pred hHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1228 GGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
||.+|+.+|.+-.. .+ .++++++.+
T Consensus 90 Gg~~a~~~a~~~~~---~v~~~i~~~~~~ 115 (257)
T TIGR03611 90 GGLIGLQLALRYPE---RLLSLVLINAWS 115 (257)
T ss_pred hHHHHHHHHHHChH---HhHHheeecCCC
Confidence 99999999875432 34 677777643
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.5e-06 Score=111.25 Aligned_cols=80 Identities=18% Similarity=0.316 Sum_probs=66.4
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCC----CCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNP----PDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~----~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
++|++++|+.+++...|.++...|.....|+.++ ...+ ..+++++++++.+.|+.. .+++|++|+|||
T Consensus 25 ~~~ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l--~~~~~~~lvGhS 102 (582)
T PRK05855 25 RPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAV--SPDRPVHLLAHD 102 (582)
T ss_pred CCeEEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHh--CCCCcEEEEecC
Confidence 4789999999999999999999998778888876 1111 247999999999888743 356789999999
Q ss_pred hhHHHHHHHHHH
Q psy1119 1227 FGGMVALELAIK 1238 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~ 1238 (1392)
|||.+|++.+.+
T Consensus 103 ~Gg~~a~~~a~~ 114 (582)
T PRK05855 103 WGSIQGWEAVTR 114 (582)
T ss_pred hHHHHHHHHHhC
Confidence 999999988776
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.5e-06 Score=97.27 Aligned_cols=93 Identities=20% Similarity=0.138 Sum_probs=72.3
Q ss_pred ceeEeecCCCccccccHHHHhhc-CCceEEEecC------CC-C--CCCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1158 NTIFMVPGIEGIATVLEPLAKNI-NAQVLVFQFD------HT-N--PPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~~y~~La~~L-~~~~~v~~l~------~e-~--~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
..|+++|+++++.++|..+...| .....++.++ .. + ...+++++|+++.+.|... ...+|++|+||||
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l--~~~~~~~lvGhSm 81 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL--PPDHKVILVGHSI 81 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc--CCCCCEEEEecCc
Confidence 35999999999999999999999 4557788876 11 1 2357999999999888743 1225899999999
Q ss_pred hHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1228 GGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
||.||.++|.+. ...+ .++++++.+
T Consensus 82 GG~ia~~~a~~~---p~~v~~lvl~~~~~ 107 (255)
T PLN02965 82 GGGSVTEALCKF---TDKISMAIYVAAAM 107 (255)
T ss_pred chHHHHHHHHhC---chheeEEEEEcccc
Confidence 999999999744 3445 788888753
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=4e-06 Score=100.13 Aligned_cols=95 Identities=21% Similarity=0.299 Sum_probs=68.3
Q ss_pred CceeEeecCCCcccc------------ccHHHHh---hc-CCceEEEecC------CCCCCCCHHHHHHHHHHHHhhhcc
Q psy1119 1157 NNTIFMVPGIEGIAT------------VLEPLAK---NI-NAQVLVFQFD------HTNPPDTIPEMADSLLPHFKKRLV 1214 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~------------~y~~La~---~L-~~~~~v~~l~------~e~~~~sieelA~~y~~~I~~~q~ 1214 (1392)
+.|++++|+++++.. .|.++.. .| .....|+.++ ..+...+++++|+++.+.|...
T Consensus 57 ~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~~~~~~~~a~dl~~ll~~l-- 134 (343)
T PRK08775 57 GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDVPIDTADQADAIALLLDAL-- 134 (343)
T ss_pred CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHc--
Confidence 568888888888765 5666665 46 3567777775 1122347899999998888743
Q ss_pred CCCCcEEEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1215 HGTDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1215 qp~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
.-+.+++|+||||||.||+++|.+-.+ .+ .|+|+++.+.
T Consensus 135 ~l~~~~~lvG~SmGG~vA~~~A~~~P~---~V~~LvLi~s~~~ 174 (343)
T PRK08775 135 GIARLHAFVGYSYGALVGLQFASRHPA---RVRTLVVVSGAHR 174 (343)
T ss_pred CCCcceEEEEECHHHHHHHHHHHHChH---hhheEEEECcccc
Confidence 233457899999999999999986533 35 8999988653
|
|
| >KOG1371|consensus | Back alignment and domain information |
|---|
Probab=98.41 E-value=4.4e-06 Score=93.97 Aligned_cols=156 Identities=16% Similarity=0.169 Sum_probs=114.3
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
.+++|||||.|=||.+.+..|.++|.+.+++-.-+.. ....-..++.+...+-.|.+...|++|.+.++++++..
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~-~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~---- 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNS-YLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV---- 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEeccccc-chhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc----
Confidence 3689999999999999999999999996555322211 12233344555455678999999999999999999876
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC-------------C
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA-------------G 927 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~-------------g 927 (1392)
++|.|+|.|+....+.-. +.-..-...|+.|+.+|-++...+ +...||+.||.+ ..|.+ .
T Consensus 77 ~fd~V~Hfa~~~~vgeS~----~~p~~Y~~nNi~gtlnlLe~~~~~--~~~~~V~sssat-vYG~p~~ip~te~~~t~~p 149 (343)
T KOG1371|consen 77 KFDAVMHFAALAAVGESM----ENPLSYYHNNIAGTLNLLEVMKAH--NVKALVFSSSAT-VYGLPTKVPITEEDPTDQP 149 (343)
T ss_pred CCceEEeehhhhccchhh----hCchhheehhhhhHHHHHHHHHHc--CCceEEEeccee-eecCcceeeccCcCCCCCC
Confidence 599999999976654321 122456678899999999988765 356677666654 33322 3
Q ss_pred ChhHHHHHHHHHHHHHHHHHc
Q psy1119 928 QTNYGMANSIMERICEARRAE 948 (1392)
Q Consensus 928 q~~Yaaana~ld~la~~r~~~ 948 (1392)
-..|+.+|.+++.+++.-+..
T Consensus 150 ~~pyg~tK~~iE~i~~d~~~~ 170 (343)
T KOG1371|consen 150 TNPYGKTKKAIEEIIHDYNKA 170 (343)
T ss_pred CCcchhhhHHHHHHHHhhhcc
Confidence 467999999999999975443
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=98.40 E-value=3.7e-06 Score=108.99 Aligned_cols=163 Identities=12% Similarity=0.083 Sum_probs=113.5
Q ss_pred ccccCCCCeEEEEcCcchHHHHHHHHHHHh-CCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHH-HHHH
Q psy1119 775 RYYADSNKSYIICGGLGGFGLELADWLVLR-GARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAG-VVNL 852 (1392)
Q Consensus 775 ~~~~~~~~~ylItGG~gGiG~~lA~~La~~-GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~-v~~l 852 (1392)
...+..+++++||||+|-||..++++|.++ |.+ |+.++|.... .. .+.. ...+.++.+|++|.++ ++++
T Consensus 309 ~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~-V~~l~r~~~~---~~----~~~~-~~~~~~~~gDl~d~~~~l~~~ 379 (660)
T PRK08125 309 ACSAKRRTRVLILGVNGFIGNHLTERLLRDDNYE-VYGLDIGSDA---IS----RFLG-HPRFHFVEGDISIHSEWIEYH 379 (660)
T ss_pred hhhhhcCCEEEEECCCchHHHHHHHHHHhCCCcE-EEEEeCCchh---hh----hhcC-CCceEEEeccccCcHHHHHHH
Confidence 344667889999999999999999999986 565 7777776421 11 1111 1246778899998665 3433
Q ss_pred HHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC-------
Q psy1119 853 LTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN------- 925 (1392)
Q Consensus 853 ~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~------- 925 (1392)
++ .+|.|||+|+........ ++-...++.|+.|+.++-+++... . ..||++||.+. .|.
T Consensus 380 l~------~~D~ViHlAa~~~~~~~~----~~~~~~~~~Nv~~t~~ll~a~~~~--~-~~~V~~SS~~v-yg~~~~~~~~ 445 (660)
T PRK08125 380 IK------KCDVVLPLVAIATPIEYT----RNPLRVFELDFEENLKIIRYCVKY--N-KRIIFPSTSEV-YGMCTDKYFD 445 (660)
T ss_pred hc------CCCEEEECccccCchhhc----cCHHHHHHhhHHHHHHHHHHHHhc--C-CeEEEEcchhh-cCCCCCCCcC
Confidence 32 589999999865432111 122346788999999998888754 2 57999999643 231
Q ss_pred ---------C---CChhHHHHHHHHHHHHHHHH-HcCCCeEEEEcccc
Q psy1119 926 ---------A---GQTNYGMANSIMERICEARR-AEGLPGLAVEWGAV 960 (1392)
Q Consensus 926 ---------~---gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~ 960 (1392)
+ .++.|+.+|.+.+.+++.-. ..|++.+.+..+.+
T Consensus 446 E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~v 493 (660)
T PRK08125 446 EDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNW 493 (660)
T ss_pred ccccccccCCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEcee
Confidence 0 12469999999999998754 45999888887654
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=7.4e-06 Score=98.01 Aligned_cols=156 Identities=15% Similarity=0.067 Sum_probs=107.9
Q ss_pred CeEEEEcCcchHHHHHHHHHHHh-CCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCC-CHHHHHHHHHHHhhc
Q psy1119 782 KSYIICGGLGGFGLELADWLVLR-GARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDIT-TEAGVVNLLTEANKL 859 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~-GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~-~~~~v~~l~~~~~~~ 859 (1392)
++++||||+|=||..++++|.++ |. +|+.+.|+... ...+.. ...+.++.+|++ +.+.+.++++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~-~V~~~~r~~~~-------~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~----- 67 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDW-EVYGMDMQTDR-------LGDLVN-HPRMHFFEGDITINKEWIEYHVK----- 67 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCC-eEEEEeCcHHH-------HHHhcc-CCCeEEEeCCCCCCHHHHHHHHc-----
Confidence 36999999999999999999987 55 48878776311 111211 124677889998 6666655443
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC-C------------
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN-A------------ 926 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~-~------------ 926 (1392)
.+|.|||+|+........ ++-...++.++.|+.+|.++++.. . ..||+.||.+.. |. .
T Consensus 68 -~~d~ViH~aa~~~~~~~~----~~p~~~~~~n~~~~~~ll~aa~~~--~-~~~v~~SS~~vy-g~~~~~~~~ee~~~~~ 138 (347)
T PRK11908 68 -KCDVILPLVAIATPATYV----KQPLRVFELDFEANLPIVRSAVKY--G-KHLVFPSTSEVY-GMCPDEEFDPEASPLV 138 (347)
T ss_pred -CCCEEEECcccCChHHhh----cCcHHHHHHHHHHHHHHHHHHHhc--C-CeEEEEecceee-ccCCCcCcCccccccc
Confidence 589999999864432211 122356788899999998887653 3 589999997532 31 1
Q ss_pred ------CChhHHHHHHHHHHHHHHHH-HcCCCeEEEEcccc
Q psy1119 927 ------GQTNYGMANSIMERICEARR-AEGLPGLAVEWGAV 960 (1392)
Q Consensus 927 ------gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~ 960 (1392)
....|+.+|.+.+.+++... +.|++...+-.+.+
T Consensus 139 ~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v 179 (347)
T PRK11908 139 YGPINKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNW 179 (347)
T ss_pred cCcCCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeee
Confidence 11259999999999887654 56999887776554
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.1e-05 Score=93.04 Aligned_cols=207 Identities=14% Similarity=0.142 Sum_probs=111.9
Q ss_pred ceeEeecCCCccccccHHHHhhcCC-ceEEEecC----C--CCC---CCCHHHHHHHHHHHHhhhc-cCCCCcEEEEeec
Q psy1119 1158 NTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD----H--TNP---PDTIPEMADSLLPHFKKRL-VHGTDEIKLVGFS 1226 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~----~--e~~---~~sieelA~~y~~~I~~~q-~qp~gPy~L~G~S 1226 (1392)
+-||++|+.++++..|..++++|.. ...++.++ + ... ..++...+++.++.+.... ..+..|++|+|||
T Consensus 26 ~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S 105 (276)
T PHA02857 26 ALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHS 105 (276)
T ss_pred EEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcC
Confidence 4577779999999999999999965 47788775 1 111 2455555555555553210 1245789999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHH-Hhc-CCcc---------ccCCHHHHHH--
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYF-LDL-MPED---------ATHSRTYQRN-- 1292 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~-~~~-~~~~---------~~~~~~~l~~-- 1292 (1392)
|||.+|..+|.+- ...+ .++++.+.... .. . .....+... ... .+.. ...+.+....
T Consensus 106 ~GG~ia~~~a~~~---p~~i~~lil~~p~~~~--~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (276)
T PHA02857 106 MGATISILAAYKN---PNLFTAMILMSPLVNA--EA---V-PRLNLLAAKLMGIFYPNKIVGKLCPESVSRDMDEVYKYQ 176 (276)
T ss_pred chHHHHHHHHHhC---ccccceEEEecccccc--cc---c-cHHHHHHHHHHHHhCCCCccCCCCHhhccCCHHHHHHHh
Confidence 9999999988642 2234 67777653211 00 0 001111100 000 0000 0000000000
Q ss_pred ---------HHHHH-HHHHHhhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEc-cCccccccC
Q psy1119 1293 ---------LAHAA-YKRITSILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVD-GNHFTVLDN 1360 (1392)
Q Consensus 1293 ---------~~~~~-~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~-G~H~~ml~~ 1360 (1392)
....+ .......... .....++++|++++.+++|. .+......+.+.+....+++.++ ++|+..++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~ 255 (276)
T PHA02857 177 YDPLVNHEKIKAGFASQVLKATNKV-RKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKET 255 (276)
T ss_pred cCCCccCCCccHHHHHHHHHHHHHH-HHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCc
Confidence 00000 0000000000 01123688999999999998 56666666766554467888888 599998887
Q ss_pred hH-HHHHHHhhhccc
Q psy1119 1361 IK-SAQIIMHEDSTD 1374 (1392)
Q Consensus 1361 ~~-~~~i~~~l~~~L 1374 (1392)
++ ..++...+.+.|
T Consensus 256 ~~~~~~~~~~~~~~l 270 (276)
T PHA02857 256 DEVKKSVMKEIETWI 270 (276)
T ss_pred hhHHHHHHHHHHHHH
Confidence 64 333444443333
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=5.2e-06 Score=99.85 Aligned_cols=94 Identities=20% Similarity=0.357 Sum_probs=66.2
Q ss_pred CceeEeecCCCccccccH--HHHhhc--------CCceEEEecC------CCCC---------CCCHHHHHHHHHHHHhh
Q psy1119 1157 NNTIFMVPGIEGIATVLE--PLAKNI--------NAQVLVFQFD------HTNP---------PDTIPEMADSLLPHFKK 1211 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~--~La~~L--------~~~~~v~~l~------~e~~---------~~sieelA~~y~~~I~~ 1211 (1392)
++||+++|+.+|+...|. .|.+.| .....|+.++ .+.+ .-+++++|+..+..+.+
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~ 148 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE 148 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH
Confidence 579999999999987765 565544 4556777765 1112 24789999887776543
Q ss_pred hccCCCCcEE-EEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1212 RLVHGTDEIK-LVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1212 ~q~qp~gPy~-L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
.. +-.+++ |+||||||.||.++|.+-. +.+ .|+++++.+
T Consensus 149 ~l--gi~~~~~lvG~SmGG~vAl~~A~~~P---~~V~~LVLi~s~~ 189 (360)
T PRK06489 149 GL--GVKHLRLILGTSMGGMHAWMWGEKYP---DFMDALMPMASQP 189 (360)
T ss_pred hc--CCCceeEEEEECHHHHHHHHHHHhCc---hhhheeeeeccCc
Confidence 31 234565 8999999999999997643 235 888888764
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=3.5e-06 Score=98.58 Aligned_cols=129 Identities=19% Similarity=0.153 Sum_probs=94.3
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
.+|||||+|=||.++++.|.++| + |+.+.|+.. .+.+|++|.+.++++++.. ..
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~-V~~~~~~~~--------------------~~~~Dl~d~~~~~~~~~~~----~~ 55 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-N-LIALDVHST--------------------DYCGDFSNPEGVAETVRKI----RP 55 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-C-EEEeccccc--------------------cccCCCCCHHHHHHHHHhc----CC
Confidence 58999999999999999999999 4 777777521 1357999999998888753 57
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC-----------CCChhH
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN-----------AGQTNY 931 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~-----------~gq~~Y 931 (1392)
|.|||+|+...... ..++-...+..|+.|+.+|.+++... . ..||++||..-.-|. .....|
T Consensus 56 D~Vih~Aa~~~~~~----~~~~~~~~~~~N~~~~~~l~~aa~~~--g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Y 128 (299)
T PRK09987 56 DVIVNAAAHTAVDK----AESEPEFAQLLNATSVEAIAKAANEV--G-AWVVHYSTDYVFPGTGDIPWQETDATAPLNVY 128 (299)
T ss_pred CEEEECCccCCcch----hhcCHHHHHHHHHHHHHHHHHHHHHc--C-CeEEEEccceEECCCCCCCcCCCCCCCCCCHH
Confidence 99999998653211 11122345678999999999988654 2 368888885432111 122469
Q ss_pred HHHHHHHHHHHHH
Q psy1119 932 GMANSIMERICEA 944 (1392)
Q Consensus 932 aaana~ld~la~~ 944 (1392)
+.+|...+.+++.
T Consensus 129 g~sK~~~E~~~~~ 141 (299)
T PRK09987 129 GETKLAGEKALQE 141 (299)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999875
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=98.36 E-value=6.7e-06 Score=101.12 Aligned_cols=156 Identities=15% Similarity=0.181 Sum_probs=106.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.++.++||||+|-||..++++|.++|.+ |+.++|...... ......+.. .++..+.+|+.++. +
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~-V~~ld~~~~~~~--~~~~~~~~~--~~~~~i~~D~~~~~-----l------ 181 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDS-VIVVDNFFTGRK--ENVMHHFSN--PNFELIRHDVVEPI-----L------ 181 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCE-EEEEeCCCccch--hhhhhhccC--CceEEEECCccChh-----h------
Confidence 5678999999999999999999999997 666666432111 111112222 34566788987752 1
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC--------------
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN-------------- 925 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~-------------- 925 (1392)
-.+|.|||+|+....... .. +-...++.|+.|+.+|.++++.. . ..||++||.... |.
T Consensus 182 ~~~D~ViHlAa~~~~~~~-~~---~p~~~~~~Nv~gt~nLleaa~~~--g-~r~V~~SS~~VY-g~~~~~p~~E~~~~~~ 253 (442)
T PLN02206 182 LEVDQIYHLACPASPVHY-KF---NPVKTIKTNVVGTLNMLGLAKRV--G-ARFLLTSTSEVY-GDPLQHPQVETYWGNV 253 (442)
T ss_pred cCCCEEEEeeeecchhhh-hc---CHHHHHHHHHHHHHHHHHHHHHh--C-CEEEEECChHHh-CCCCCCCCCccccccC
Confidence 148999999986432211 11 23467889999999999888654 2 379999997543 21
Q ss_pred -C--CChhHHHHHHHHHHHHHH-HHHcCCCeEEEEccc
Q psy1119 926 -A--GQTNYGMANSIMERICEA-RRAEGLPGLAVEWGA 959 (1392)
Q Consensus 926 -~--gq~~Yaaana~ld~la~~-r~~~Glp~~ai~~g~ 959 (1392)
+ ..+.|+.+|.+.+.++.. .+..|++...+..+.
T Consensus 254 ~P~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~ 291 (442)
T PLN02206 254 NPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFN 291 (442)
T ss_pred CCCCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEecc
Confidence 1 135799999999998875 445688877766543
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.4e-05 Score=86.19 Aligned_cols=139 Identities=22% Similarity=0.199 Sum_probs=103.9
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCcc
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVD 863 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~ 863 (1392)
++|+||+|.+|..+++.|.++|.+ |..+.|+..+.+. ...+.++.+|+.|++.+.++++ ..|
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~-V~~~~R~~~~~~~-----------~~~~~~~~~d~~d~~~~~~al~------~~d 62 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHE-VTALVRSPSKAED-----------SPGVEIIQGDLFDPDSVKAALK------GAD 62 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSE-EEEEESSGGGHHH-----------CTTEEEEESCTTCHHHHHHHHT------TSS
T ss_pred eEEECCCChHHHHHHHHHHHCCCE-EEEEecCchhccc-----------ccccccceeeehhhhhhhhhhh------hcc
Confidence 589999999999999999999976 8888898542211 3457788999999988887665 689
Q ss_pred EEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCC---------hhHHHH
Q psy1119 864 GIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQ---------TNYGMA 934 (1392)
Q Consensus 864 gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq---------~~Yaaa 934 (1392)
.||++++...+ +...+.++.+++... +..+||++||.......++. ..|...
T Consensus 63 ~vi~~~~~~~~-----------------~~~~~~~~~~a~~~~--~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (183)
T PF13460_consen 63 AVIHAAGPPPK-----------------DVDAAKNIIEAAKKA--GVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARD 123 (183)
T ss_dssp EEEECCHSTTT-----------------HHHHHHHHHHHHHHT--TSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHH
T ss_pred hhhhhhhhhcc-----------------ccccccccccccccc--ccccceeeeccccCCCCCcccccccccchhhhHHH
Confidence 99999976443 144556666666543 45799999998876655552 368888
Q ss_pred HHHHHHHHHHHHHcCCCeEEEEccccCc
Q psy1119 935 NSIMERICEARRAEGLPGLAVEWGAVGE 962 (1392)
Q Consensus 935 na~ld~la~~r~~~Glp~~ai~~g~~~~ 962 (1392)
+...+.+.+ ..+++.+.+..+.+-+
T Consensus 124 ~~~~e~~~~---~~~~~~~ivrp~~~~~ 148 (183)
T PF13460_consen 124 KREAEEALR---ESGLNWTIVRPGWIYG 148 (183)
T ss_dssp HHHHHHHHH---HSTSEEEEEEESEEEB
T ss_pred HHHHHHHHH---hcCCCEEEEECcEeEe
Confidence 877766663 5699988888876543
|
... |
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=98.34 E-value=9.1e-06 Score=93.82 Aligned_cols=202 Identities=14% Similarity=0.149 Sum_probs=104.6
Q ss_pred CCCceeEeecCCCccccccHH----HHhhcCCceEEEecC------CCCCC---CCHHHHHHHHHHHHhhhccCCCCcEE
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEP----LAKNINAQVLVFQFD------HTNPP---DTIPEMADSLLPHFKKRLVHGTDEIK 1221 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~----La~~L~~~~~v~~l~------~e~~~---~sieelA~~y~~~I~~~q~qp~gPy~ 1221 (1392)
|.++|++++|+.++....|.. +...+...+.|+.++ .+.+. .+...+++.+.+.+... ...+++
T Consensus 28 g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~ 104 (282)
T TIGR03343 28 GNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL---DIEKAH 104 (282)
T ss_pred CCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc---CCCCee
Confidence 445799999999887655543 333334457777765 11111 11123556655555422 345899
Q ss_pred EEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCC--Ch-----------HHHHHHHHhcCC-ccccCC
Q psy1119 1222 LVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLP--DW-----------NAKLNYFLDLMP-EDATHS 1286 (1392)
Q Consensus 1222 L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~--~~-----------~~~l~~~~~~~~-~~~~~~ 1286 (1392)
++||||||.+|+++|.+.. ..+ .++++++.+... ......+ .+ .+....+..... .....+
T Consensus 105 lvG~S~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (282)
T TIGR03343 105 LVGNSMGGATALNFALEYP---DRIGKLILMGPGGLGP-SLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLIT 180 (282)
T ss_pred EEEECchHHHHHHHHHhCh---HhhceEEEECCCCCCc-cccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccCc
Confidence 9999999999999997543 234 788887642110 0000000 00 001111111110 000111
Q ss_pred HHHHHHHH------HHHHHHHHh------hccccCC-CCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEc-
Q psy1119 1287 RTYQRNLA------HAAYKRITS------ILKYTDP-KHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVD- 1351 (1392)
Q Consensus 1287 ~~~l~~~~------~~~~~~~~~------~~~y~~~-~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~- 1351 (1392)
.+..+... +.....+.. ...+... ...++++|++++.+++|. ...+....+.+... ..+++.++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~-~~~~~~i~~ 259 (282)
T TIGR03343 181 EELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMP-DAQLHVFSR 259 (282)
T ss_pred HHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCC-CCEEEEeCC
Confidence 22111110 000011110 1111111 124688999999999987 54444445555543 57888888
Q ss_pred cCccccccChHHH
Q psy1119 1352 GNHFTVLDNIKSA 1364 (1392)
Q Consensus 1352 G~H~~ml~~~~~~ 1364 (1392)
++|+.++++|...
T Consensus 260 agH~~~~e~p~~~ 272 (282)
T TIGR03343 260 CGHWAQWEHADAF 272 (282)
T ss_pred CCcCCcccCHHHH
Confidence 5999999988644
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.1e-05 Score=93.93 Aligned_cols=93 Identities=16% Similarity=0.255 Sum_probs=70.6
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCC---CCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNP---PDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~---~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
|.++||+|+|+.+.....|..+...|.....++.++ .+.+ ..+++++++.+.+.+... +..+++|+||
T Consensus 32 G~~~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvG~ 108 (286)
T PRK03204 32 GTGPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHL---GLDRYLSMGQ 108 (286)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHh---CCCCEEEEEE
Confidence 456899999999988888999999998777777775 1212 246888998888777633 4568999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeC
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDS 1253 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~ 1253 (1392)
||||.||..+|..-. +.+ .++++++
T Consensus 109 S~Gg~va~~~a~~~p---~~v~~lvl~~~ 134 (286)
T PRK03204 109 DWGGPISMAVAVERA---DRVRGVVLGNT 134 (286)
T ss_pred CccHHHHHHHHHhCh---hheeEEEEECc
Confidence 999999999986432 235 6777765
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=6.7e-06 Score=107.14 Aligned_cols=160 Identities=19% Similarity=0.215 Sum_probs=108.2
Q ss_pred eEEEEcCcchHHHHHHHHHH--HhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHH--HHHHHHHhh
Q psy1119 783 SYIICGGLGGFGLELADWLV--LRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGV--VNLLTEANK 858 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La--~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v--~~l~~~~~~ 858 (1392)
++|||||+|-||..+++.|+ .+|.+ |+.++|+... .........+. ..++..+.+|+++++.. ...++.+
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~-V~~l~R~~~~-~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~l-- 75 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREAT-VHVLVRRQSL-SRLEALAAYWG--ADRVVPLVGDLTEPGLGLSEADIAEL-- 75 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCE-EEEEECcchH-HHHHHHHHhcC--CCcEEEEecccCCccCCcCHHHHHHh--
Confidence 68999999999999999999 47876 7778886421 11111111111 13578889999995310 1111222
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC------------
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA------------ 926 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~------------ 926 (1392)
..+|.|||+|+..... .+ .....++|+.|+.++.+++... ....||++||.+..-...
T Consensus 76 -~~~D~Vih~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a~~~--~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~ 145 (657)
T PRK07201 76 -GDIDHVVHLAAIYDLT----AD---EEAQRAANVDGTRNVVELAERL--QAATFHHVSSIAVAGDYEGVFREDDFDEGQ 145 (657)
T ss_pred -cCCCEEEECceeecCC----CC---HHHHHHHHhHHHHHHHHHHHhc--CCCeEEEEeccccccCccCccccccchhhc
Confidence 4799999999965321 12 2445678999999998887653 346899999976532111
Q ss_pred -CChhHHHHHHHHHHHHHHHHHcCCCeEEEEcccc
Q psy1119 927 -GQTNYGMANSIMERICEARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 927 -gq~~Yaaana~ld~la~~r~~~Glp~~ai~~g~~ 960 (1392)
....|+.+|...+.+++. ..|++.+.+..+.+
T Consensus 146 ~~~~~Y~~sK~~~E~~~~~--~~g~~~~ilRp~~v 178 (657)
T PRK07201 146 GLPTPYHRTKFEAEKLVRE--ECGLPWRVYRPAVV 178 (657)
T ss_pred CCCCchHHHHHHHHHHHHH--cCCCcEEEEcCCee
Confidence 124599999999999864 46899887777665
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.3e-05 Score=96.15 Aligned_cols=95 Identities=23% Similarity=0.311 Sum_probs=67.0
Q ss_pred CceeEeecCCCccccc-cHHHHhhcCC-ceEEEecC------CCCC---CCCHHHHHHHHHHHHhhhccC---CCCcEEE
Q psy1119 1157 NNTIFMVPGIEGIATV-LEPLAKNINA-QVLVFQFD------HTNP---PDTIPEMADSLLPHFKKRLVH---GTDEIKL 1222 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~-y~~La~~L~~-~~~v~~l~------~e~~---~~sieelA~~y~~~I~~~q~q---p~gPy~L 1222 (1392)
+++|+++|+.+++... |..++..|.. ...|+.++ .+.+ ..+++.+++++.+.+.....+ +..|++|
T Consensus 87 ~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~L 166 (349)
T PLN02385 87 KAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFL 166 (349)
T ss_pred CeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEE
Confidence 4679999999888764 5788888864 57788775 1111 248899998888777533111 2347999
Q ss_pred EeechhHHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1223 VGFSFGGMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1223 ~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
+||||||.||..+|.+ ....+ .++|+++.
T Consensus 167 vGhSmGG~val~~a~~---~p~~v~glVLi~p~ 196 (349)
T PLN02385 167 FGQSMGGAVALKVHLK---QPNAWDGAILVAPM 196 (349)
T ss_pred EEeccchHHHHHHHHh---CcchhhheeEeccc
Confidence 9999999999988764 22334 78888754
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=6.9e-06 Score=106.49 Aligned_cols=127 Identities=21% Similarity=0.194 Sum_probs=97.6
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
+++||||+|.||.++++.|+++|.+ |+.++|+... .+. ..+.++.+|++|.+++.++++ .+
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~-Vv~l~R~~~~---------~~~---~~v~~v~gDL~D~~~l~~al~------~v 62 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHE-VVGIARHRPD---------SWP---SSADFIAADIRDATAVESAMT------GA 62 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCE-EEEEECCchh---------hcc---cCceEEEeeCCCHHHHHHHHh------CC
Confidence 5899999999999999999999997 7777886311 011 146678999999999887775 48
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHHHH
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERIC 942 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~la 942 (1392)
|.|||+|+.... .+..|+.|+.++.+++... ..+.||++||.+ |...+.++
T Consensus 63 D~VVHlAa~~~~-------------~~~vNv~GT~nLLeAa~~~--gvkr~V~iSS~~--------------K~aaE~ll 113 (854)
T PRK05865 63 DVVAHCAWVRGR-------------NDHINIDGTANVLKAMAET--GTGRIVFTSSGH--------------QPRVEQML 113 (854)
T ss_pred CEEEECCCcccc-------------hHHHHHHHHHHHHHHHHHc--CCCeEEEECCcH--------------HHHHHHHH
Confidence 999999985421 3467899999998877643 446899999963 77777776
Q ss_pred HHHHHcCCCeEEEEcccc
Q psy1119 943 EARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 943 ~~r~~~Glp~~ai~~g~~ 960 (1392)
+ +.|++.+.+..+.+
T Consensus 114 ~---~~gl~~vILRp~~V 128 (854)
T PRK05865 114 A---DCGLEWVAVRCALI 128 (854)
T ss_pred H---HcCCCEEEEEeceE
Confidence 4 45899888877664
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.8e-05 Score=95.32 Aligned_cols=93 Identities=19% Similarity=0.258 Sum_probs=74.2
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCC------CCCHHHHHHHHHHHHhhhccCCCCcEEEE
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNP------PDTIPEMADSLLPHFKKRLVHGTDEIKLV 1223 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~------~~sieelA~~y~~~I~~~q~qp~gPy~L~ 1223 (1392)
.++||+|+|+.+++...|++++..|.....|+.++ .+.+ ..+++++++...+.|... ...++.|+
T Consensus 126 ~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l---~~~~~~Lv 202 (383)
T PLN03084 126 NNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL---KSDKVSLV 202 (383)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHh---CCCCceEE
Confidence 35799999999999999999999998878888876 1222 248999999998888743 34579999
Q ss_pred eechhHHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1224 GFSFGGMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1224 G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
|||+||.||+.+|.+-. +.+ .+++++++
T Consensus 203 G~s~GG~ia~~~a~~~P---~~v~~lILi~~~ 231 (383)
T PLN03084 203 VQGYFSPPVVKYASAHP---DKIKKLILLNPP 231 (383)
T ss_pred EECHHHHHHHHHHHhCh---HhhcEEEEECCC
Confidence 99999999999887533 335 88999875
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=98.26 E-value=6.4e-06 Score=94.33 Aligned_cols=92 Identities=29% Similarity=0.403 Sum_probs=64.0
Q ss_pred CceeEeecCCCccccc-cHHHHhhcCC-ceEEEecC------CCCC-----CCCHHHHHHHHHHHHhhhccCCCCcEEEE
Q psy1119 1157 NNTIFMVPGIEGIATV-LEPLAKNINA-QVLVFQFD------HTNP-----PDTIPEMADSLLPHFKKRLVHGTDEIKLV 1223 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~-y~~La~~L~~-~~~v~~l~------~e~~-----~~sieelA~~y~~~I~~~q~qp~gPy~L~ 1223 (1392)
++|++|+|+..|+... +..+...+.. ...|+.++ ...+ ..+++++++.+...+... ...+++|+
T Consensus 25 ~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li 101 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL---GLDKFYLL 101 (288)
T ss_pred CCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc---CCCcEEEE
Confidence 5799999998777654 4455555554 57777775 1111 257899998877666532 34569999
Q ss_pred eechhHHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1224 GFSFGGMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1224 G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
||||||.+|..+|.+. ...+ .++++++.
T Consensus 102 G~S~Gg~ia~~~a~~~---p~~v~~lvl~~~~ 130 (288)
T TIGR01250 102 GHSWGGMLAQEYALKY---GQHLKGLIISSML 130 (288)
T ss_pred EeehHHHHHHHHHHhC---ccccceeeEeccc
Confidence 9999999999999854 2334 66776654
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=98.25 E-value=2e-06 Score=95.96 Aligned_cols=91 Identities=15% Similarity=0.081 Sum_probs=72.2
Q ss_pred EEEc-CcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcCCc
Q psy1119 785 IICG-GLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLGPV 862 (1392)
Q Consensus 785 lItG-G~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g~I 862 (1392)
.||. .+||||+++|+.|+++|++ |++++|... ++..+ ...||+++.++++++++.+ +.++++
T Consensus 18 ~itN~SSGgIG~AIA~~la~~Ga~-Vvlv~~~~~-----------l~~~~----~~~~Dv~d~~s~~~l~~~v~~~~g~i 81 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAGHE-VTLVTTKRA-----------LKPEP----HPNLSIREIETTKDLLITLKELVQEH 81 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCCCE-EEEEcChhh-----------ccccc----CCcceeecHHHHHHHHHHHHHHcCCC
Confidence 3444 5889999999999999997 677665310 11111 1358999999999999988 668999
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhh
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGP 891 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~ 891 (1392)
|++|||||+....++.+++.++|++++..
T Consensus 82 DiLVnnAgv~d~~~~~~~s~e~~~~~~~~ 110 (227)
T TIGR02114 82 DILIHSMAVSDYTPVYMTDLEQVQASDNL 110 (227)
T ss_pred CEEEECCEeccccchhhCCHHHHhhhcch
Confidence 99999999988889999999999988543
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=98.24 E-value=8.2e-06 Score=95.34 Aligned_cols=164 Identities=15% Similarity=0.171 Sum_probs=118.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhC-CceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRG-ARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~G-Ar~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
+..+++||||+|=||+.+++.|.++| ...|.+............+.... ....+.+.++|+.+...+.+.++
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~---~~~~v~~~~~D~~~~~~i~~a~~---- 75 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF---RSGRVTVILGDLLDANSISNAFQ---- 75 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc---cCCceeEEecchhhhhhhhhhcc----
Confidence 35799999999999999999999999 66688877764321111111111 24568889999999888876654
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC-----------
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG----------- 927 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g----------- 927 (1392)
.. .|+|+|+...+....+ +-+..++.||.||.|+-+++... ...++|..||.....++.-
T Consensus 76 --~~-~Vvh~aa~~~~~~~~~----~~~~~~~vNV~gT~nvi~~c~~~--~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p 146 (361)
T KOG1430|consen 76 --GA-VVVHCAASPVPDFVEN----DRDLAMRVNVNGTLNVIEACKEL--GVKRLIYTSSAYVVFGGEPIINGDESLPYP 146 (361)
T ss_pred --Cc-eEEEeccccCcccccc----chhhheeecchhHHHHHHHHHHh--CCCEEEEecCceEEeCCeecccCCCCCCCc
Confidence 45 7888888776665544 45678999999999998887664 6689999999987765432
Q ss_pred ---ChhHHHHHHHHHHHHHHHH-HcCCCeEEEEccc
Q psy1119 928 ---QTNYGMANSIMERICEARR-AEGLPGLAVEWGA 959 (1392)
Q Consensus 928 ---q~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~ 959 (1392)
.-.|+.+|+--+.+...-. ..++-..++-...
T Consensus 147 ~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~ 182 (361)
T KOG1430|consen 147 LKHIDPYGESKALAEKLVLEANGSDDLYTCALRPPG 182 (361)
T ss_pred cccccccchHHHHHHHHHHHhcCCCCeeEEEEcccc
Confidence 2379999998888887644 2335555555443
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.4e-05 Score=98.30 Aligned_cols=93 Identities=20% Similarity=0.322 Sum_probs=64.7
Q ss_pred CceeEeecCCCccccccHH-HHhhcC----CceEEEecC------CCCC---CCCHHHHHHHHHHHHhhhccCCCCcEEE
Q psy1119 1157 NNTIFMVPGIEGIATVLEP-LAKNIN----AQVLVFQFD------HTNP---PDTIPEMADSLLPHFKKRLVHGTDEIKL 1222 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~-La~~L~----~~~~v~~l~------~e~~---~~sieelA~~y~~~I~~~q~qp~gPy~L 1222 (1392)
++||+++|+.+|+...|.+ +...|. ....++.++ ...+ .-+++++++.+...+.+.. +.++++|
T Consensus 201 k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~l--g~~k~~L 278 (481)
T PLN03087 201 KEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERY--KVKSFHI 278 (481)
T ss_pred CCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHc--CCCCEEE
Confidence 4799999999999887764 334443 456777765 1111 2478888887753343332 4578999
Q ss_pred EeechhHHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1223 VGFSFGGMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1223 ~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
+||||||.+|+.+|.+-. +.+ .|+|++++
T Consensus 279 VGhSmGG~iAl~~A~~~P---e~V~~LVLi~~~ 308 (481)
T PLN03087 279 VAHSLGCILALALAVKHP---GAVKSLTLLAPP 308 (481)
T ss_pred EEECHHHHHHHHHHHhCh---HhccEEEEECCC
Confidence 999999999999998633 235 88888763
|
|
| >KOG1454|consensus | Back alignment and domain information |
|---|
Probab=98.22 E-value=9.5e-06 Score=95.50 Aligned_cols=92 Identities=22% Similarity=0.344 Sum_probs=67.8
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCc--eEEEecC--C--------CCCCCCHHHHHHHHHHHHhhhccCCCCcEEE
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQ--VLVFQFD--H--------TNPPDTIPEMADSLLPHFKKRLVHGTDEIKL 1222 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~--~~v~~l~--~--------e~~~~sieelA~~y~~~I~~~q~qp~gPy~L 1222 (1392)
..++|++++||.+++...|......|... ..++.++ + ..+.-+..+.+......+.+. ...|+.|
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~---~~~~~~l 132 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV---FVEPVSL 132 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh---cCcceEE
Confidence 35689999999999999999999999987 8888876 1 111234455555444444433 3457999
Q ss_pred EeechhHHHHHHHHHHHHHcCCcc-EEEEEe
Q psy1119 1223 VGFSFGGMVALELAIKLEQLGTKC-HLYLVD 1252 (1392)
Q Consensus 1223 ~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD 1252 (1392)
+|||+||.+|+-+|...- +.| .|+++|
T Consensus 133 vghS~Gg~va~~~Aa~~P---~~V~~lv~~~ 160 (326)
T KOG1454|consen 133 VGHSLGGIVALKAAAYYP---ETVDSLVLLD 160 (326)
T ss_pred EEeCcHHHHHHHHHHhCc---ccccceeeec
Confidence 999999999999999843 345 677666
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.3e-05 Score=97.25 Aligned_cols=129 Identities=13% Similarity=0.125 Sum_probs=92.0
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhC--CceEEEecCCCcccHHHHHHHHHH---------h-cCC--------ceEE
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRG--ARKLVLTSRSGVKNGYQALRIKIW---------K-SYD--------VQVL 837 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~G--Ar~lvl~sRs~~~~~~~~~~~~~l---------~-~~G--------~~v~ 837 (1392)
|..+++++||||+|=||..+++.|++.+ .++|.++.|........++..+++ + ..| .++.
T Consensus 116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~ 195 (605)
T PLN02503 116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV 195 (605)
T ss_pred hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence 5679999999999999999999999875 457888888754333332222221 1 122 3688
Q ss_pred EEeccCCCHH------HHHHHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCC
Q psy1119 838 ISTDDITTEA------GVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLG 911 (1392)
Q Consensus 838 ~~~~Dv~~~~------~v~~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~ 911 (1392)
++.+|++++. ..+.+.+ .+|.|||+|+.... .+..+..++.|+.|+.++.+++... ..+.
T Consensus 196 ~v~GDl~d~~LGLs~~~~~~L~~------~vDiVIH~AA~v~f-------~~~~~~a~~vNV~GT~nLLelA~~~-~~lk 261 (605)
T PLN02503 196 PVVGNVCESNLGLEPDLADEIAK------EVDVIINSAANTTF-------DERYDVAIDINTRGPCHLMSFAKKC-KKLK 261 (605)
T ss_pred EEEeeCCCcccCCCHHHHHHHHh------cCCEEEECcccccc-------ccCHHHHHHHHHHHHHHHHHHHHHc-CCCC
Confidence 8999999972 3332221 58999999987541 1346678889999999998887543 4567
Q ss_pred eEEEecccc
Q psy1119 912 QFVVFSSVS 920 (1392)
Q Consensus 912 ~fV~~SS~s 920 (1392)
.||++||..
T Consensus 262 ~fV~vSTay 270 (605)
T PLN02503 262 LFLQVSTAY 270 (605)
T ss_pred eEEEccCce
Confidence 899998864
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.9e-05 Score=89.75 Aligned_cols=164 Identities=18% Similarity=0.184 Sum_probs=113.9
Q ss_pred CeEEEEcCcchHHHHHHHHHH-HhCCceEEEecCCCcccHHHHHHHHHHh-------cCCceEEEEeccCCCH------H
Q psy1119 782 KSYIICGGLGGFGLELADWLV-LRGARKLVLTSRSGVKNGYQALRIKIWK-------SYDVQVLISTDDITTE------A 847 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La-~~GAr~lvl~sRs~~~~~~~~~~~~~l~-------~~G~~v~~~~~Dv~~~------~ 847 (1392)
+++++|||+|=||+-+.+.|. +.-+| |+.+-|........++..+.+. ...-+|.++.+|++.+ .
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~k-v~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~ 79 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAK-VICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER 79 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCc-EEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence 478999999999976665555 44566 6655565433333333333333 3456899999999843 3
Q ss_pred HHHHHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC--
Q psy1119 848 GVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN-- 925 (1392)
Q Consensus 848 ~v~~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~-- 925 (1392)
..+.+.+ .||.|||||....-- ....+...+||.||..+-+++.. .+...|.++||++..-..
T Consensus 80 ~~~~La~------~vD~I~H~gA~Vn~v-------~pYs~L~~~NVlGT~evlrLa~~--gk~Kp~~yVSsisv~~~~~~ 144 (382)
T COG3320 80 TWQELAE------NVDLIIHNAALVNHV-------FPYSELRGANVLGTAEVLRLAAT--GKPKPLHYVSSISVGETEYY 144 (382)
T ss_pred HHHHHhh------hcceEEecchhhccc-------CcHHHhcCcchHhHHHHHHHHhc--CCCceeEEEeeeeecccccc
Confidence 3333322 599999999754321 12345678999999999887643 256789999999854221
Q ss_pred ------------------CCChhHHHHHHHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 926 ------------------AGQTNYGMANSIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 926 ------------------~gq~~Yaaana~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
.--+.|+-+|.+.+-+++.-..+|+|+..+-.|.+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~ 198 (382)
T COG3320 145 SNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYIT 198 (382)
T ss_pred CCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeee
Confidence 112579999999999999988889999999998874
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.8e-05 Score=95.54 Aligned_cols=157 Identities=15% Similarity=0.190 Sum_probs=105.4
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
++..+++||||+|=||..++++|.++|.+ |+.++|....... . ...+.. ...+..+..|+.+..
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~-V~~ldr~~~~~~~--~-~~~~~~-~~~~~~~~~Di~~~~----------- 181 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDE-VIVIDNFFTGRKE--N-LVHLFG-NPRFELIRHDVVEPI----------- 181 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCCE-EEEEeCCCCccHh--H-hhhhcc-CCceEEEECcccccc-----------
Confidence 34568999999999999999999999997 6667765321111 1 111111 124667788886642
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC------------
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA------------ 926 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~------------ 926 (1392)
+..+|.|||+|+....... ..+. ...+..|+.|+.+|.++++.. . ..||++||.+. .|.+
T Consensus 182 ~~~~D~ViHlAa~~~~~~~-~~~p---~~~~~~Nv~gT~nLleaa~~~--g-~r~V~~SS~~V-Yg~~~~~p~~E~~~~~ 253 (436)
T PLN02166 182 LLEVDQIYHLACPASPVHY-KYNP---VKTIKTNVMGTLNMLGLAKRV--G-ARFLLTSTSEV-YGDPLEHPQKETYWGN 253 (436)
T ss_pred ccCCCEEEECceeccchhh-ccCH---HHHHHHHHHHHHHHHHHHHHh--C-CEEEEECcHHH-hCCCCCCCCCcccccc
Confidence 1258999999986432211 1122 466889999999999888654 2 37999988753 2321
Q ss_pred -----CChhHHHHHHHHHHHHHHHH-HcCCCeEEEEccc
Q psy1119 927 -----GQTNYGMANSIMERICEARR-AEGLPGLAVEWGA 959 (1392)
Q Consensus 927 -----gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~ 959 (1392)
..+.|+.+|...+.+++.-. ..|++...+-.+.
T Consensus 254 ~~p~~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~ 292 (436)
T PLN02166 254 VNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFN 292 (436)
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEcc
Confidence 13469999999999987643 4588877666543
|
|
| >KOG2382|consensus | Back alignment and domain information |
|---|
Probab=98.15 E-value=5.3e-05 Score=86.26 Aligned_cols=213 Identities=17% Similarity=0.233 Sum_probs=125.4
Q ss_pred CCceeEeecCCCccccccHHHHhhcCC--ceEEEecC----CC---CCCCCHHHHHHHHHHHHhhhc-cCCCCcEEEEee
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINA--QVLVFQFD----HT---NPPDTIPEMADSLLPHFKKRL-VHGTDEIKLVGF 1225 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~--~~~v~~l~----~e---~~~~sieelA~~y~~~I~~~q-~qp~gPy~L~G~ 1225 (1392)
..||+..+|+.-|+..-|+.+++.|.. ++.+|.++ +. ...-+-++||++...-|.... ..-..|-.|.||
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GH 130 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLGH 130 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCCceeccc
Confidence 458999999999999999999888864 35666664 22 223467889988888776320 002568899999
Q ss_pred chhHHHHHHHHHHHHHcCCccEEEEEeCCCCCC-------------ccccCCC----CChHHHHHHHHhc----------
Q psy1119 1226 SFGGMVALELAIKLEQLGTKCHLYLVDSAPDYV-------------LTSLRKL----PDWNAKLNYFLDL---------- 1278 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v~LvLiD~~p~~~-------------~~~l~~~----~~~~~~l~~~~~~---------- 1278 (1392)
|||| +...|+-.+..--...+++++|.+|... ...+... +...+.+..+.+.
T Consensus 131 smGG-~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi 209 (315)
T KOG2382|consen 131 SMGG-VKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQFI 209 (315)
T ss_pred Ccch-HHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHHHH
Confidence 9999 8888888887766656999999988311 0000001 1111112211111
Q ss_pred ---CCc-ccc------CCHHHHHHHHHHHHHHHHhhccccCC-CCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeE
Q psy1119 1279 ---MPE-DAT------HSRTYQRNLAHAAYKRITSILKYTDP-KHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVK 1346 (1392)
Q Consensus 1279 ---~~~-~~~------~~~~~l~~~~~~~~~~~~~~~~y~~~-~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~ 1346 (1392)
+.. ... .+...+.. +..+++ ...|.-. ...++.+|+++++|..+. ...+....-+++.. .++
T Consensus 210 ~~nl~~~~~~~s~~w~~nl~~i~~----~~~~~~-~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp-~~e 283 (315)
T KOG2382|consen 210 LTNLKKSPSDGSFLWRVNLDSIAS----LLDEYE-ILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFP-NVE 283 (315)
T ss_pred HHhcCcCCCCCceEEEeCHHHHHH----HHHHHH-hhcccccccccccccceeEEecCCCCCcChhHHHHHHHhcc-chh
Confidence 110 000 01111111 111111 1222111 114788999999999887 43333334444443 488
Q ss_pred EEEEc-cCccccccChHHHHHHHhhhcccCCC
Q psy1119 1347 VHFVD-GNHFTVLDNIKSAQIIMHEDSTDFKT 1377 (1392)
Q Consensus 1347 v~~v~-G~H~~ml~~~~~~~i~~~l~~~L~~~ 1377 (1392)
++.++ +||.-++++|... ...+.+.|.++
T Consensus 284 ~~~ld~aGHwVh~E~P~~~--~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 284 VHELDEAGHWVHLEKPEEF--IESISEFLEEP 313 (315)
T ss_pred eeecccCCceeecCCHHHH--HHHHHHHhccc
Confidence 99999 9999999999743 33333455443
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=3.9e-05 Score=82.19 Aligned_cols=83 Identities=16% Similarity=0.175 Sum_probs=64.4
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcCC
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLGP 861 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g~ 861 (1392)
+++||||+ |+|.+++++|+++|++ |++++|+.. ........+.. +.++..+.+|++|.+++.++++.+ +++++
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~-V~v~~R~~~---~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~ 75 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFH-VSVIARREV---KLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGP 75 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCE-EEEEECCHH---HHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 58999998 7888999999999997 666778742 22222332332 457888999999999999999987 67899
Q ss_pred ccEEEECccc
Q psy1119 862 VDGIFNLAVV 871 (1392)
Q Consensus 862 I~gvi~~Agv 871 (1392)
+|.+|+..-+
T Consensus 76 id~lv~~vh~ 85 (177)
T PRK08309 76 FDLAVAWIHS 85 (177)
T ss_pred CeEEEEeccc
Confidence 9999987643
|
|
| >PRK00982 acpP acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=5.9e-06 Score=76.03 Aligned_cols=69 Identities=25% Similarity=0.390 Sum_probs=62.2
Q ss_pred chHHHHHHHHhCCCCCcccCcCcch-hhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTL-AELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l-~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
..+.+.+++.+++ +++.++.+.+| .++|+|||+.++|...++++||+.++..++ ...|+.++++++...
T Consensus 6 ~~l~~~l~~~l~~-~~~~i~~d~~l~~dlglDSl~~~~li~~le~~f~i~i~~~~~~~~~ti~~l~~~l~~~ 76 (78)
T PRK00982 6 EKVKKIIVEQLGV-DEEEVTPEASFVDDLGADSLDTVELVMALEEEFGIEIPDEDAEKIKTVGDAVDYIEKH 76 (78)
T ss_pred HHHHHHHHHHHCC-CHHHCCCCcchHhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCcHHHHHHHHHHh
Confidence 4578889999998 46889999999 899999999999999999999999999998 789999999987653
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.9e-05 Score=109.30 Aligned_cols=94 Identities=21% Similarity=0.413 Sum_probs=74.0
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecC----C--C----------CCCCCHHHHHHHHHHHHhhhccCCCCcE
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD----H--T----------NPPDTIPEMADSLLPHFKKRLVHGTDEI 1220 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~----~--e----------~~~~sieelA~~y~~~I~~~q~qp~gPy 1220 (1392)
++||+++|+.+|+...|.+++..|.....++.++ + . ....+++.+++.+.+.+... ..+++
T Consensus 1371 ~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l---~~~~v 1447 (1655)
T PLN02980 1371 GSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI---TPGKV 1447 (1655)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh---CCCCE
Confidence 5789999999999999999999998777777765 1 1 11347999999888777643 34689
Q ss_pred EEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1221 KLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1221 ~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
+|+||||||.||+++|.+... .+ .++++++.|.
T Consensus 1448 ~LvGhSmGG~iAl~~A~~~P~---~V~~lVlis~~p~ 1481 (1655)
T PLN02980 1448 TLVGYSMGARIALYMALRFSD---KIEGAVIISGSPG 1481 (1655)
T ss_pred EEEEECHHHHHHHHHHHhChH---hhCEEEEECCCCc
Confidence 999999999999999976543 34 7888887654
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=4.1e-05 Score=92.73 Aligned_cols=94 Identities=24% Similarity=0.343 Sum_probs=68.1
Q ss_pred CceeEeecCCCcccccc-------------HHHH---hhc-CCceEEEecC--C-----CC----------------CCC
Q psy1119 1157 NNTIFMVPGIEGIATVL-------------EPLA---KNI-NAQVLVFQFD--H-----TN----------------PPD 1196 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y-------------~~La---~~L-~~~~~v~~l~--~-----e~----------------~~~ 1196 (1392)
++||+|+|+.+|+...| ..+. ..| .....|+.++ + .. +.-
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 57899999999999753 4443 123 4566777765 2 11 134
Q ss_pred CHHHHHHHHHHHHhhhccCCCCc-EEEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1197 TIPEMADSLLPHFKKRLVHGTDE-IKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1197 sieelA~~y~~~I~~~q~qp~gP-y~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
|++++++.+.+.++.. +-++ ++|+||||||.+|+++|.+.. ..+ .++++++.+.
T Consensus 128 ~~~~~~~~~~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~ 183 (379)
T PRK00175 128 TIRDWVRAQARLLDAL---GITRLAAVVGGSMGGMQALEWAIDYP---DRVRSALVIASSAR 183 (379)
T ss_pred CHHHHHHHHHHHHHHh---CCCCceEEEEECHHHHHHHHHHHhCh---HhhhEEEEECCCcc
Confidence 8999999988888743 3345 699999999999999999753 235 8899998664
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=98.03 E-value=6.8e-05 Score=106.27 Aligned_cols=167 Identities=20% Similarity=0.149 Sum_probs=115.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhC---CceEEEecCCCcccHHHHHHHHHHhcCC-------ceEEEEeccCCCH---
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRG---ARKLVLTSRSGVKNGYQALRIKIWKSYD-------VQVLISTDDITTE--- 846 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~G---Ar~lvl~sRs~~~~~~~~~~~~~l~~~G-------~~v~~~~~Dv~~~--- 846 (1392)
..++++|||++|-||..+++.|+++| ..+|+.+.|+...........+.+..+| .++.++.+|++++
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 35789999999999999999999988 3357777887543333333333333333 2688889999864
Q ss_pred ---HHHHHHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc
Q psy1119 847 ---AGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR 923 (1392)
Q Consensus 847 ---~~v~~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~ 923 (1392)
+....+ ...+|.|||+|+.... ... +.....+|+.|+.++.+++... ....|+++||++..-
T Consensus 1050 l~~~~~~~l------~~~~d~iiH~Aa~~~~----~~~---~~~~~~~nv~gt~~ll~~a~~~--~~~~~v~vSS~~v~~ 1114 (1389)
T TIGR03443 1050 LSDEKWSDL------TNEVDVIIHNGALVHW----VYP---YSKLRDANVIGTINVLNLCAEG--KAKQFSFVSSTSALD 1114 (1389)
T ss_pred cCHHHHHHH------HhcCCEEEECCcEecC----ccC---HHHHHHhHHHHHHHHHHHHHhC--CCceEEEEeCeeecC
Confidence 222222 1368999999986531 122 3344567999999998887543 446899999976541
Q ss_pred C--------------CC--------------CChhHHHHHHHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 924 G--------------NA--------------GQTNYGMANSIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 924 G--------------~~--------------gq~~Yaaana~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
+ .. ....|+.+|...+.+++..+..|+|...+..|.+-
T Consensus 1115 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~ 1180 (1389)
T TIGR03443 1115 TEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVT 1180 (1389)
T ss_pred cccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccc
Confidence 1 00 12359999999999998776779999988888764
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=98.01 E-value=8e-05 Score=88.44 Aligned_cols=94 Identities=19% Similarity=0.164 Sum_probs=63.9
Q ss_pred ceeEeecCCCccc-cccHHHHhhcCC-ceEEEecC----CC--C---CCCCHHHHHHHHHHHHhhhcc---CCCCcEEEE
Q psy1119 1158 NTIFMVPGIEGIA-TVLEPLAKNINA-QVLVFQFD----HT--N---PPDTIPEMADSLLPHFKKRLV---HGTDEIKLV 1223 (1392)
Q Consensus 1158 ~pLF~vp~agG~~-~~y~~La~~L~~-~~~v~~l~----~e--~---~~~sieelA~~y~~~I~~~q~---qp~gPy~L~ 1223 (1392)
+.|+++|+.++.. +.|..++..|.. ...|+.++ +. . ...+++.+++++...|+.... .+..|+.|+
T Consensus 60 ~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~ 139 (330)
T PLN02298 60 ALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLY 139 (330)
T ss_pred eEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEE
Confidence 4589999998664 567788888864 57788775 11 1 134788888877666653211 124589999
Q ss_pred eechhHHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1224 GFSFGGMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1224 G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
||||||.+|..+|.+- -..+ .++++++.
T Consensus 140 GhSmGG~ia~~~a~~~---p~~v~~lvl~~~~ 168 (330)
T PLN02298 140 GESMGGAICLLIHLAN---PEGFDGAVLVAPM 168 (330)
T ss_pred EecchhHHHHHHHhcC---cccceeEEEeccc
Confidence 9999999999877632 2335 67777653
|
|
| >KOG4409|consensus | Back alignment and domain information |
|---|
Probab=97.99 E-value=6.6e-05 Score=85.65 Aligned_cols=92 Identities=21% Similarity=0.342 Sum_probs=61.0
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC------CCC------CCCCHHHHHHHHHHHHhhhc-cCCCCcEE
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTN------PPDTIPEMADSLLPHFKKRL-VHGTDEIK 1221 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~------~~~sieelA~~y~~~I~~~q-~qp~gPy~ 1221 (1392)
..++||+++|+.|++.-.|..=-..|.....+|.++ ... +.+-.+ .+++.|.+-. -..=+...
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~----~fvesiE~WR~~~~L~Kmi 163 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEK----EFVESIEQWRKKMGLEKMI 163 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchH----HHHHHHHHHHHHcCCccee
Confidence 345899999999998855554335555577888876 111 112222 4444443210 11335699
Q ss_pred EEeechhHHHHHHHHHHHHHcCCcc-EEEEEeC
Q psy1119 1222 LVGFSFGGMVALELAIKLEQLGTKC-HLYLVDS 1253 (1392)
Q Consensus 1222 L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~ 1253 (1392)
|+||||||.||+-.|.+--++ | +|+|.|.
T Consensus 164 lvGHSfGGYLaa~YAlKyPer---V~kLiLvsP 193 (365)
T KOG4409|consen 164 LVGHSFGGYLAAKYALKYPER---VEKLILVSP 193 (365)
T ss_pred EeeccchHHHHHHHHHhChHh---hceEEEecc
Confidence 999999999999988876554 6 8999987
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.0001 Score=86.13 Aligned_cols=128 Identities=14% Similarity=0.130 Sum_probs=85.3
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
.+.+|||||+|=||..+++.|.++|.+ |++.. .|+++.+.+...++..
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~-V~~~~---------------------------~~~~~~~~v~~~l~~~---- 56 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGID-FHYGS---------------------------GRLENRASLEADIDAV---- 56 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCE-EEEec---------------------------CccCCHHHHHHHHHhc----
Confidence 367999999999999999999999986 44321 2344555555544432
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc-C---------------
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR-G--------------- 924 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~-G--------------- 924 (1392)
..|.|||+|+....... +...++-...+..|+.|+.+|.++++.. ... ++++||.+... +
T Consensus 57 ~~D~ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~~--gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~ 132 (298)
T PLN02778 57 KPTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCRER--GLV-LTNYATGCIFEYDDAHPLGSGIGFKEED 132 (298)
T ss_pred CCCEEEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHh--CCC-EEEEecceEeCCCCCCCcccCCCCCcCC
Confidence 57999999997542111 1111233567889999999999988654 233 45555532110 0
Q ss_pred --CCCChhHHHHHHHHHHHHHH
Q psy1119 925 --NAGQTNYGMANSIMERICEA 944 (1392)
Q Consensus 925 --~~gq~~Yaaana~ld~la~~ 944 (1392)
.+..+.|+.+|.+.+.+++.
T Consensus 133 ~p~~~~s~Yg~sK~~~E~~~~~ 154 (298)
T PLN02778 133 TPNFTGSFYSKTKAMVEELLKN 154 (298)
T ss_pred CCCCCCCchHHHHHHHHHHHHH
Confidence 11235799999999999975
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00019 Score=87.09 Aligned_cols=81 Identities=17% Similarity=0.201 Sum_probs=57.6
Q ss_pred CceeEeecCCCccccccHHHHhhcC-CceEEEecC----C--CC---CCCCHHHHHHHHHHHHhhhc-cCCCCcEEEEee
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNIN-AQVLVFQFD----H--TN---PPDTIPEMADSLLPHFKKRL-VHGTDEIKLVGF 1225 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~-~~~~v~~l~----~--e~---~~~sieelA~~y~~~I~~~q-~qp~gPy~L~G~ 1225 (1392)
+++|+++|+.+++...|..++.+|. ..+.++.++ + .. ...+++.+++++...++... ..+..|++|+||
T Consensus 136 ~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGh 215 (395)
T PLN02652 136 RGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGH 215 (395)
T ss_pred ceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 3579999999999999999999996 456777765 1 11 12467776665544443211 124568999999
Q ss_pred chhHHHHHHHHH
Q psy1119 1226 SFGGMVALELAI 1237 (1392)
Q Consensus 1226 S~Gg~VA~EmA~ 1237 (1392)
||||.+|..+|.
T Consensus 216 SmGG~ial~~a~ 227 (395)
T PLN02652 216 STGGAVVLKAAS 227 (395)
T ss_pred CHHHHHHHHHHh
Confidence 999999997764
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=97.94 E-value=4.7e-05 Score=88.43 Aligned_cols=126 Identities=25% Similarity=0.248 Sum_probs=91.2
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
.+|||||+|=||.++++.|.++|.. ++.++|+ ..|++|.+++.++++.. ..
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~-v~~~~r~------------------------~~dl~d~~~~~~~~~~~----~p 52 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYE-VIATSRS------------------------DLDLTDPEAVAKLLEAF----KP 52 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEE-EEEESTT------------------------CS-TTSHHHHHHHHHHH------
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCE-EEEeCch------------------------hcCCCCHHHHHHHHHHh----CC
Confidence 5899999999999999999999976 6666665 67999999999999876 57
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC-----------ChhH
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG-----------QTNY 931 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g-----------q~~Y 931 (1392)
|.|||+|+...... ..++-+..+..|+.++.+|.+++... .-.+|++||..-+-|..+ ...|
T Consensus 53 d~Vin~aa~~~~~~----ce~~p~~a~~iN~~~~~~la~~~~~~---~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~Y 125 (286)
T PF04321_consen 53 DVVINCAAYTNVDA----CEKNPEEAYAINVDATKNLAEACKER---GARLIHISTDYVFDGDKGGPYTEDDPPNPLNVY 125 (286)
T ss_dssp SEEEE------HHH----HHHSHHHHHHHHTHHHHHHHHHHHHC---T-EEEEEEEGGGS-SSTSSSB-TTS----SSHH
T ss_pred CeEeccceeecHHh----hhhChhhhHHHhhHHHHHHHHHHHHc---CCcEEEeeccEEEcCCcccccccCCCCCCCCHH
Confidence 89999998642111 11234567889999999999988653 358999999765444322 4689
Q ss_pred HHHHHHHHHHHHH
Q psy1119 932 GMANSIMERICEA 944 (1392)
Q Consensus 932 aaana~ld~la~~ 944 (1392)
+-+|...+...+.
T Consensus 126 G~~K~~~E~~v~~ 138 (286)
T PF04321_consen 126 GRSKLEGEQAVRA 138 (286)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988875
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00012 Score=87.82 Aligned_cols=94 Identities=23% Similarity=0.335 Sum_probs=67.2
Q ss_pred CceeEeecCCCccccc-----------cHHHH---hhc-CCceEEEecC--C------CC--------------CCCCHH
Q psy1119 1157 NNTIFMVPGIEGIATV-----------LEPLA---KNI-NAQVLVFQFD--H------TN--------------PPDTIP 1199 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~-----------y~~La---~~L-~~~~~v~~l~--~------e~--------------~~~sie 1199 (1392)
+++|+++|+.+|+... |..+. +.| .....|+.++ + .+ +..+++
T Consensus 31 ~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 110 (351)
T TIGR01392 31 SNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIR 110 (351)
T ss_pred CCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHH
Confidence 4689999999997732 44443 234 4567777765 2 11 135799
Q ss_pred HHHHHHHHHHhhhccCCCCc-EEEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1200 EMADSLLPHFKKRLVHGTDE-IKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1200 elA~~y~~~I~~~q~qp~gP-y~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
++++.+.+.++.. .-.+ ++|+||||||.||+++|.+- ...+ .|+++++.+.
T Consensus 111 ~~~~~~~~~~~~l---~~~~~~~l~G~S~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~ 163 (351)
T TIGR01392 111 DDVKAQKLLLDHL---GIEQIAAVVGGSMGGMQALEWAIDY---PERVRAIVVLATSAR 163 (351)
T ss_pred HHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHC---hHhhheEEEEccCCc
Confidence 9999998887643 3345 99999999999999999863 2335 8999998664
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00014 Score=86.84 Aligned_cols=50 Identities=4% Similarity=0.127 Sum_probs=36.5
Q ss_pred CcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc--CccccccChHH
Q psy1119 1313 KAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG--NHFTVLDNIKS 1363 (1392)
Q Consensus 1313 ~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G--~H~~ml~~~~~ 1363 (1392)
.++++|++++.+++|. ........|.+...+ .+++.+++ +|+.+++++..
T Consensus 272 ~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~-a~l~~i~~~~GH~~~~~~~~~ 324 (339)
T PRK07581 272 GSITAKTFVMPISTDLYFPPEDCEAEAALIPN-AELRPIESIWGHLAGFGQNPA 324 (339)
T ss_pred hcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEeCCCCCccccccCcHH
Confidence 3578999999999987 444444455555544 67888995 89999987653
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00022 Score=84.69 Aligned_cols=94 Identities=13% Similarity=0.139 Sum_probs=66.5
Q ss_pred CceeEeecCCCccccccHHHHhhcC-CceEEEecC----C--CCC--------CCCHHHHHHHHHHHHhhhc-cCCCCcE
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNIN-AQVLVFQFD----H--TNP--------PDTIPEMADSLLPHFKKRL-VHGTDEI 1220 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~-~~~~v~~l~----~--e~~--------~~sieelA~~y~~~I~~~q-~qp~gPy 1220 (1392)
+++|+++|+.+++...|..++..+. ....|+.++ + +.+ ..++++.++++...+.... ..+..|+
T Consensus 54 ~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 133 (330)
T PRK10749 54 DRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKR 133 (330)
T ss_pred CcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCe
Confidence 4689999999998889999997764 456777765 1 111 1478888887776664320 1145789
Q ss_pred EEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeC
Q psy1119 1221 KLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDS 1253 (1392)
Q Consensus 1221 ~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~ 1253 (1392)
.++||||||.||...|.+ ....+ .++++.+
T Consensus 134 ~l~GhSmGG~ia~~~a~~---~p~~v~~lvl~~p 164 (330)
T PRK10749 134 YALAHSMGGAILTLFLQR---HPGVFDAIALCAP 164 (330)
T ss_pred EEEEEcHHHHHHHHHHHh---CCCCcceEEEECc
Confidence 999999999999887764 23344 7777755
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00013 Score=84.85 Aligned_cols=153 Identities=19% Similarity=0.148 Sum_probs=91.5
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCcc
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVD 863 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~ 863 (1392)
+|||||+|-||..+++.|+++|.+ |+.++|+....... ...+ + .|+.. ..+ ...+..+|
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~-------~~~~--~----~~~~~-~~~------~~~~~~~D 59 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHE-VTILTRSPPAGANT-------KWEG--Y----KPWAP-LAE------SEALEGAD 59 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCE-EEEEeCCCCCCCcc-------ccee--e----ecccc-cch------hhhcCCCC
Confidence 589999999999999999999986 88888886432211 0011 1 12221 111 12345799
Q ss_pred EEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC------------CChhH
Q psy1119 864 GIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA------------GQTNY 931 (1392)
Q Consensus 864 gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~------------gq~~Y 931 (1392)
.|||+|+..... ...+.+.....++.|+.++.++.++++........||..||+. ..|.. +..-|
T Consensus 60 ~Vvh~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~-~yg~~~~~~~~E~~~~~~~~~~ 136 (292)
T TIGR01777 60 AVINLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVG-YYGTSEDRVFTEEDSPAGDDFL 136 (292)
T ss_pred EEEECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEE-EeCCCCCCCcCcccCCCCCChH
Confidence 999999863211 2234455667788999999999998865311123455555442 22211 11123
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEEEcccc
Q psy1119 932 GMANSIMERICEARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~r~~~Glp~~ai~~g~~ 960 (1392)
.-.+...+......+..+++.+.+..+.+
T Consensus 137 ~~~~~~~e~~~~~~~~~~~~~~ilR~~~v 165 (292)
T TIGR01777 137 AELCRDWEEAAQAAEDLGTRVVLLRTGIV 165 (292)
T ss_pred HHHHHHHHHHhhhchhcCCceEEEeeeeE
Confidence 33333445554444456889888887765
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00012 Score=79.56 Aligned_cols=161 Identities=17% Similarity=0.112 Sum_probs=90.0
Q ss_pred ceeEeecCCCccccccHH--HHhhcCC---ceEEEecCCCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHH
Q psy1119 1158 NTIFMVPGIEGIATVLEP--LAKNINA---QVLVFQFDHTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVA 1232 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~~y~~--La~~L~~---~~~v~~l~~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA 1232 (1392)
+||+++|+.+|+...+.. ++..+.. ...++..+-. ..-+++++.+.+.+++. +..+..|+||||||.+|
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~---g~~~~~~~~l~~l~~~~---~~~~~~lvG~S~Gg~~a 75 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLP---PYPADAAELLESLVLEH---GGDPLGLVGSSLGGYYA 75 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCC---CCHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHH
Confidence 579999999999988763 4454432 4555555411 11255666665555532 35689999999999999
Q ss_pred HHHHHHHHHcCCccEEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCc-----cccCCHHHHHHHHHHHHHHHHhhccc
Q psy1119 1233 LELAIKLEQLGTKCHLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPE-----DATHSRTYQRNLAHAAYKRITSILKY 1307 (1392)
Q Consensus 1233 ~EmA~~Le~~G~~v~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~y 1307 (1392)
..+|.+.. ..++++++++.. .+.+..+...... ....+++++ .++ ..+
T Consensus 76 ~~~a~~~~-----~~~vl~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~d~---~~~ 128 (190)
T PRK11071 76 TWLSQCFM-----LPAVVVNPAVRP-----------FELLTDYLGENENPYTGQQYVLESRHI--------YDL---KVM 128 (190)
T ss_pred HHHHHHcC-----CCEEEECCCCCH-----------HHHHHHhcCCcccccCCCcEEEcHHHH--------HHH---Hhc
Confidence 99998642 346777654321 1122222211111 111122222 222 223
Q ss_pred cCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-Cccc
Q psy1119 1308 TDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHFT 1356 (1392)
Q Consensus 1308 ~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~~ 1356 (1392)
++... ++++++.++.+++|. ++........+ .+..+.++| ||.+
T Consensus 129 ~~~~i-~~~~~v~iihg~~De~V~~~~a~~~~~----~~~~~~~~ggdH~f 174 (190)
T PRK11071 129 QIDPL-ESPDLIWLLQQTGDEVLDYRQAVAYYA----ACRQTVEEGGNHAF 174 (190)
T ss_pred CCccC-CChhhEEEEEeCCCCcCCHHHHHHHHH----hcceEEECCCCcch
Confidence 33322 377899999999987 44333322222 235667786 6765
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00041 Score=81.53 Aligned_cols=91 Identities=18% Similarity=0.191 Sum_probs=60.4
Q ss_pred CceeEeecCCCccccccHHHHhhcC-CceEEEecC------CCCC----CCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNIN-AQVLVFQFD------HTNP----PDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~-~~~~v~~l~------~e~~----~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
++||+++|+..|+... ..+...+. ....|+.++ ...+ ..+++++++.+...+. . . +-.++.++||
T Consensus 27 ~~~lvllHG~~~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~-~-l-~~~~~~lvG~ 102 (306)
T TIGR01249 27 GKPVVFLHGGPGSGTD-PGCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLRE-K-L-GIKNWLVFGG 102 (306)
T ss_pred CCEEEEECCCCCCCCC-HHHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHH-H-c-CCCCEEEEEE
Confidence 4789999998877654 33444443 345666665 1111 2467888877665554 3 2 3457999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
||||.+|.++|.+-.. .+ .+++++..
T Consensus 103 S~GG~ia~~~a~~~p~---~v~~lvl~~~~ 129 (306)
T TIGR01249 103 SWGSTLALAYAQTHPE---VVTGLVLRGIF 129 (306)
T ss_pred CHHHHHHHHHHHHChH---hhhhheeeccc
Confidence 9999999999986532 34 67777764
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00022 Score=82.81 Aligned_cols=228 Identities=16% Similarity=0.162 Sum_probs=128.7
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC-
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP- 861 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~- 861 (1392)
+++||||+|.+|..+++.|.++|.+ |..++|+..+. ...| +..+.+|++|++.+..+++..+.+..
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~-V~~~~R~~~~~----------~~~~--~~~~~~d~~d~~~l~~a~~~~~~~~g~ 67 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVP-FLVASRSSSSS----------AGPN--EKHVKFDWLDEDTWDNPFSSDDGMEPE 67 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCc-EEEEeCCCccc----------cCCC--CccccccCCCHHHHHHHHhcccCcCCc
Confidence 3799999999999999999999987 88889985432 1123 33457899999999998876544545
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHHH
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERI 941 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~l 941 (1392)
+|.|||+++...+ . .....++-++++.. ...+||++||.....+.+ .+..++.
T Consensus 68 ~d~v~~~~~~~~~---------~--------~~~~~~~i~aa~~~--gv~~~V~~Ss~~~~~~~~-------~~~~~~~- 120 (285)
T TIGR03649 68 ISAVYLVAPPIPD---------L--------APPMIKFIDFARSK--GVRRFVLLSASIIEKGGP-------AMGQVHA- 120 (285)
T ss_pred eeEEEEeCCCCCC---------h--------hHHHHHHHHHHHHc--CCCEEEEeeccccCCCCc-------hHHHHHH-
Confidence 9999999874221 0 01223444444332 457999999865443322 1222232
Q ss_pred HHHHHHc-CCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccCCCeEEehhhhhhhcCCCCcc
Q psy1119 942 CEARRAE-GLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKKAGSGGAT 1020 (1392)
Q Consensus 942 a~~r~~~-Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 1020 (1392)
+.++. |++.+.+..+.+-+. +. . ..... .+.+..+.... ..+.+..--..+
T Consensus 121 --~l~~~~gi~~tilRp~~f~~~-~~-~-----------~~~~~-----------~~~~~~~~~~~--~g~~~~~~v~~~ 172 (285)
T TIGR03649 121 --HLDSLGGVEYTVLRPTWFMEN-FS-E-----------EFHVE-----------AIRKENKIYSA--TGDGKIPFVSAD 172 (285)
T ss_pred --HHHhccCCCEEEEeccHHhhh-hc-c-----------ccccc-----------ccccCCeEEec--CCCCccCcccHH
Confidence 33344 888888877643211 00 0 00000 00000111000 000000001134
Q ss_pred hHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhhccCCHHHHHHH
Q psy1119 1021 NIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIRGLTFAKLQDI 1085 (1392)
Q Consensus 1021 ~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i~~~ti~~La~~ 1085 (1392)
.+++.++.+|.-+ .. ....+.-.|-+.+..-|+...+.+.+|..++.. ..+..++.+.
T Consensus 173 Dva~~~~~~l~~~--~~--~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~~---~~~~~~~~~~ 230 (285)
T TIGR03649 173 DIARVAYRALTDK--VA--PNTDYVVLGPELLTYDDVAEILSRVLGRKITHV---KLTEEELAQR 230 (285)
T ss_pred HHHHHHHHHhcCC--Cc--CCCeEEeeCCccCCHHHHHHHHHHHhCCceEEE---eCCHHHHHHH
Confidence 6677777776421 11 123344456688888899999999998865543 3344444443
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00011 Score=75.59 Aligned_cols=140 Identities=22% Similarity=0.384 Sum_probs=87.5
Q ss_pred eeEeecCCCccccccHHHHhhcCCc-eEEEecCCCCCCC-CHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHHHHHH
Q psy1119 1159 TIFMVPGIEGIATVLEPLAKNINAQ-VLVFQFDHTNPPD-TIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELA 1236 (1392)
Q Consensus 1159 pLF~vp~agG~~~~y~~La~~L~~~-~~v~~l~~e~~~~-sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA~EmA 1236 (1392)
|++++|+.+++...|..+++.|... +.++.++...... .-..-++.+++.+...+. ...+..|+|||+||.+|..++
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~ 79 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGADAVERVLADIRAGYP-DPDRIILIGHSMGGAIAANLA 79 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHSHHHHHHHHHHHHHHC-TCCEEEEEEETHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchhHHHHHHHHHHHhhcC-CCCcEEEEEEccCcHHHHHHh
Confidence 5889999999999999999999754 6666665211111 122334445555432212 567899999999999999888
Q ss_pred HHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHHHHHHHhhccccCCCCCcc
Q psy1119 1237 IKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAF 1315 (1392)
Q Consensus 1237 ~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~y~~~~~~~~ 1315 (1392)
.+- .++ .++++.+.|. ...+ .+.
T Consensus 80 ~~~----~~v~~~v~~~~~~~--~~~~--------------------------------------------------~~~ 103 (145)
T PF12695_consen 80 ARN----PRVKAVVLLSPYPD--SEDL--------------------------------------------------AKI 103 (145)
T ss_dssp HHS----TTESEEEEESESSG--CHHH--------------------------------------------------TTT
T ss_pred hhc----cceeEEEEecCccc--hhhh--------------------------------------------------hcc
Confidence 722 445 6777766211 0000 023
Q ss_pred cceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-Ccc
Q psy1119 1316 GGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHF 1355 (1392)
Q Consensus 1316 ~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~ 1355 (1392)
+.|++++.++.|. ...+....+.+....+.+++.++| +|+
T Consensus 104 ~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 104 RIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp TSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred CCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 4499999999887 433333333333446788999996 553
|
... |
| >CHL00124 acpP acyl carrier protein; Validated | Back alignment and domain information |
|---|
Probab=97.80 E-value=4.1e-05 Score=71.14 Aligned_cols=69 Identities=23% Similarity=0.389 Sum_probs=61.9
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchhh-cCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLAE-LGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~~-lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
..+.+.+++.+++ +++.++++.+|.+ +|+|||..++|...++++||+.++..++ ...|+.+++.++...
T Consensus 8 ~~l~~ii~~~~~~-~~~~i~~d~~l~~dlg~DSl~~~eli~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~ 78 (82)
T CHL00124 8 EKVQSIVAEQLGI-EKSEVTLDANFTRDLGADSLDVVELVMAIEEKFDIEIPDEDAEKISTLQEAVDFISQK 78 (82)
T ss_pred HHHHHHHHHHHCC-CHHHCCCCcchhhhcCCcHHHHHHHHHHHHHHHCCccCHHHHHHcCCHHHHHHHHHHH
Confidence 3577888999998 4588999999987 9999999999999999999999999988 788999999988764
|
|
| >PRK06060 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=97.77 E-value=2.5e-05 Score=102.65 Aligned_cols=70 Identities=20% Similarity=0.160 Sum_probs=64.1
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
+.+...|+.+|+..+.+.|+.+++|++||+|||+|++|+++|++.||+.|++..+ .++|+.+|++++...
T Consensus 548 ~~v~~~~a~vl~~~~~~~i~~~~~f~~lG~dSl~av~l~~~l~~~~g~~l~~~~~~~~pt~~~la~~l~~~ 618 (705)
T PRK06060 548 DAVCAEAAKMLGEPDPWSVDQDLAFSELGFDSQMTVTLCKRLAAVTGLRLPETVGWDYGSISGLAQYLEAE 618 (705)
T ss_pred HHHHHHHHHHhCCCChhhCCCCCChhhcCchHHHHHHHHHHHHHHhCCCCCceeeecCCCHHHHHHHHHHH
Confidence 3577889999998666789999999999999999999999999999999999998 999999999988764
|
|
| >smart00826 PKS_DH PKS_DH | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00032 Score=73.63 Aligned_cols=138 Identities=22% Similarity=0.269 Sum_probs=92.4
Q ss_pred ceeEeeccccCCCCcccccccchh-hHH----HHHHHHHHHHHHHcCCCCccCCEEeeeeeeeeeeeeCCCCeEEEEEEE
Q psy1119 34 LVQLKNSFRSLSASPKRLASTALD-RVY----QRFQMAWETVSLMRGELYTEVPVVFENIKFMRATNVPKEGSVEFIVMV 108 (1392)
Q Consensus 34 ~~~~~~~~~~~~~~~~~l~gh~id-r~l----~yl~l~W~t~a~~~~~~~~~~pv~fe~v~~~rat~l~~~~~v~~~v~i 108 (1392)
...+..++. .++..|+.+|+++ +.+ +|+.+++.......+ ..++.|+|+.|.++..++.....++.+.+
T Consensus 15 ~~~~~~~~~--~~~~~~l~~h~v~~~~~~P~~~~~~~~~~a~~~~~~----~~~~~l~~~~~~~pl~~~~~~~~~~~~~~ 88 (167)
T smart00826 15 GVVFTGRLS--LRTHPWLADHRVGGTVVLPGAAYVEMALAAADEVGC----GAAVRLEELTLEAPLVLPEDGAVEVQVVV 88 (167)
T ss_pred ceEEEEEeC--CCCCchhhcCEECCEEEecHHHHHHHHHHHHHHhCC----CCCceEeEEEeccccccCCCCCEEEEEEE
Confidence 345777776 4444499999999 776 999999888554433 34788999999999999888777777766
Q ss_pred Ee--ccc--cEEEeeCC------cEEEEEEEEccCCcccccccCCCCCCCCCCCcccccCChhhHHHHHHhcCCccCccc
Q psy1119 109 QK--GSG--NFEIVEGG------AAIVTGKVYIPADVKTEMVRIPDQYKIPRTEGEAIELQSRDIYKELRLRGYHYKGLF 178 (1392)
Q Consensus 109 ~~--~sg--~Fei~~~~------~~vvsG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~diYkel~lrGy~y~~~F 178 (1392)
.. ..+ .|++.... ...++|++...+.+.... ..... .........++..++|..|+-.||+|++.|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~y~~~~~~g~~~g~~f 164 (167)
T smart00826 89 GAPDESGRRTFEVYSRPDGDGPWTRHATGTLRPAAAAPAAP-AADLA---AWPPAGAEPVDVADFYERLAARGLEYGPAF 164 (167)
T ss_pred ecCCCCCceEEEEEeCCCCCCCceeeeEEEEecCCCCCCCC-ccccc---cCCCCCCcccCHHHHHHHHHhcCcccCccc
Confidence 43 223 46665431 466889887543211110 00000 011112235888999999999999999999
Q ss_pred cce
Q psy1119 179 RSL 181 (1392)
Q Consensus 179 ~~i 181 (1392)
|+|
T Consensus 165 ~~~ 167 (167)
T smart00826 165 QGL 167 (167)
T ss_pred cCC
Confidence 975
|
|
| >PRK05883 acyl carrier protein; Validated | Back alignment and domain information |
|---|
Probab=97.76 E-value=6.7e-05 Score=70.91 Aligned_cols=69 Identities=20% Similarity=0.288 Sum_probs=63.1
Q ss_pred chHHHHHHHHhCCCCCcccCcCcch-hhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTL-AELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l-~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
..+.+.+++.|++ ++++|.++.+| .+||+|||..+++...|+++||+.++..++ ...|+.+|..++...
T Consensus 17 ~~l~~iia~~l~v-~~~~I~~d~~l~~dlg~DSL~~v~lv~~lE~~fgI~i~~ee~~~~~TV~dl~~~v~~~ 87 (91)
T PRK05883 17 ATLLSILRDDLNV-DLTRVTPDARLVDDVGLDSVAFAVGMVAIEERLGVALSEEDLLSCDTVGDLEAAIAAK 87 (91)
T ss_pred HHHHHHHHHHhCC-ChhhCCCCCchhhccCCChHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHH
Confidence 4688999999998 56899999999 789999999999999999999999999999 789999999998764
|
|
| >smart00823 PKS_PP Phosphopantetheine attachment site | Back alignment and domain information |
|---|
Probab=97.75 E-value=7.6e-05 Score=68.87 Aligned_cols=68 Identities=24% Similarity=0.321 Sum_probs=58.0
Q ss_pred hHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhc
Q psy1119 1021 NIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVS 1088 (1392)
Q Consensus 1021 ~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~ 1088 (1392)
.+...+...++......++.+.+|+++|+||+++++++.|+++++++.++..++ ..+|+..++.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~dSl~~~~~~~~l~~~~~~~i~~~~~~~~~t~~~l~~~i~~ 84 (86)
T smart00823 16 LVREQVAAVLGHAAAEAIDPDRPFRDLGLDSLTAVELRNRLEAATGLRLPATLVFDHPTPAALAEHLAA 84 (86)
T ss_pred HHHHHHHHHHCCCccccCCCCCCHHHcCchHHHHHHHHHHHHHHHCCCCChHHHHcCCCHHHHHHHHHH
Confidence 467778888876432335889999999999999999999999999999999998 88999999887654
|
Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups PUBMED:5321311. |
| >PRK07081 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=7.6e-05 Score=69.36 Aligned_cols=70 Identities=14% Similarity=0.283 Sum_probs=59.4
Q ss_pred hHHHHHHHHhCCC-CCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhhc---cCCHHHHHHHHhccc
Q psy1119 1021 NIVDAVINILGLR-DLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIR---GLTFAKLQDIAVSFE 1090 (1392)
Q Consensus 1021 ~l~~~~a~~l~~~-~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i~---~~ti~~La~~~~~~~ 1090 (1392)
.+.+.+.+.++.. +++.++.+.+|+++|+|||.+++|...|+++||+.+|..++. -.|+..+++++....
T Consensus 4 ~i~~ii~~~~~~~~~~~~i~~d~~l~dlGlDSl~~v~li~~lE~~f~I~i~~~~~~~~~~~tv~~l~~~V~~~~ 77 (83)
T PRK07081 4 TIRTILKKVAKLEVPIDSIADDADLYEAGLSSLATVQLMLAIEDAFDIEIPDEMLNRKLFASIDALAGAVTQLQ 77 (83)
T ss_pred HHHHHHHHHHcCCCCHHhcCCCCCHhhcCCCHHHHHHHHHHHHHHhCCcCCHHHcCHHHhccHHHHHHHHHHHH
Confidence 5677788875442 347899999999999999999999999999999999999983 489999999887654
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00041 Score=78.60 Aligned_cols=124 Identities=21% Similarity=0.235 Sum_probs=97.0
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCcc
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVD 863 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~ 863 (1392)
.||||+.|=+|.+|++.|. .+.. ++.++|.. +|++|.+.+.+++++. +-|
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~-v~a~~~~~------------------------~Ditd~~~v~~~i~~~----~PD 52 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFE-VIATDRAE------------------------LDITDPDAVLEVIRET----RPD 52 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCce-EEeccCcc------------------------ccccChHHHHHHHHhh----CCC
Confidence 7999999999999999998 4344 66666651 7999999999999886 689
Q ss_pred EEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC-----------ChhHH
Q psy1119 864 GIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG-----------QTNYG 932 (1392)
Q Consensus 864 gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g-----------q~~Ya 932 (1392)
.|||+|....-.. -+.+=+..+.+|+.|+.|+.+++... .-.+|.+|+-.-+-|..+ ...|+
T Consensus 53 vVIn~AAyt~vD~----aE~~~e~A~~vNa~~~~~lA~aa~~~---ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG 125 (281)
T COG1091 53 VVINAAAYTAVDK----AESEPELAFAVNATGAENLARAAAEV---GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYG 125 (281)
T ss_pred EEEECcccccccc----ccCCHHHHHHhHHHHHHHHHHHHHHh---CCeEEEeecceEecCCCCCCCCCCCCCCChhhhh
Confidence 9999998643211 22234578899999999999988653 357899998665555443 46899
Q ss_pred HHHHHHHHHHHH
Q psy1119 933 MANSIMERICEA 944 (1392)
Q Consensus 933 aana~ld~la~~ 944 (1392)
.+|..-|..++.
T Consensus 126 ~sKl~GE~~v~~ 137 (281)
T COG1091 126 RSKLAGEEAVRA 137 (281)
T ss_pred HHHHHHHHHHHH
Confidence 999999999876
|
|
| >PRK09184 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=8.2e-05 Score=69.82 Aligned_cols=70 Identities=16% Similarity=0.292 Sum_probs=58.5
Q ss_pred chHHHHHHHHhCC--CCCcccCcCcch--hhcCcchhhHHHHHHHHHHHhCCccChhhh----ccCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGL--RDLKTVSLHSTL--AELGMDSMMAVEIKQTLEREFEVFLTPQDI----RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~--~~~~~i~~~~~l--~~lG~DSL~avel~~~l~~~~~~~l~~~~i----~~~ti~~La~~~~~~ 1089 (1392)
..+.+.+++.|++ -++++|+++.+| .+||+|||-+++|...++++||+.++..+. .-.|+++|++++...
T Consensus 9 ~~l~~~I~e~l~~~~i~~~~I~~d~~l~~~dLglDSld~velv~~lE~~fgi~i~~~~~~~~~~~~TV~~l~~~I~~~ 86 (89)
T PRK09184 9 RELAELIVEELNLEDVQPESIDADAPLYGEGLGLDSIDILEIALVISKRYGFQLRSDNPDNQRIFASLRALAAYVAAH 86 (89)
T ss_pred HHHHHHHHHHHCCCCCCHHHCCCCcccccccCCCcHHHHHHHHHHHHHHHCCcCCCcchhhhhccCCHHHHHHHHHHh
Confidence 3577888899985 255889999998 459999999999999999999999985443 258999999998763
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00036 Score=83.61 Aligned_cols=92 Identities=17% Similarity=0.232 Sum_probs=58.2
Q ss_pred CceeEeecCCCcccccc-----HHHHhhcCC-ceEEEecC--C---CCCCCCHHHHHHH----HHHHHhhhccCCCCcEE
Q psy1119 1157 NNTIFMVPGIEGIATVL-----EPLAKNINA-QVLVFQFD--H---TNPPDTIPEMADS----LLPHFKKRLVHGTDEIK 1221 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y-----~~La~~L~~-~~~v~~l~--~---e~~~~sieelA~~----y~~~I~~~q~qp~gPy~ 1221 (1392)
++|++++|+......++ +.+++.|.. ...||.++ + .....++++.+.. .++.+++. .+..+..
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~--~~~~~i~ 139 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRT--SKLDQIS 139 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHH--hCCCccc
Confidence 46899999875444443 578888854 35666665 1 1123466666543 34445433 2556899
Q ss_pred EEeechhHHHHHHHHHHHHHcCCcc-EEEEEeC
Q psy1119 1222 LVGFSFGGMVALELAIKLEQLGTKC-HLYLVDS 1253 (1392)
Q Consensus 1222 L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~ 1253 (1392)
++||||||.+++..+.... ..+ .++++.+
T Consensus 140 lvGhS~GG~i~~~~~~~~~---~~v~~lv~~~~ 169 (350)
T TIGR01836 140 LLGICQGGTFSLCYAALYP---DKIKNLVTMVT 169 (350)
T ss_pred EEEECHHHHHHHHHHHhCc---hheeeEEEecc
Confidence 9999999999998776432 235 5666654
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >TIGR00517 acyl_carrier acyl carrier protein | Back alignment and domain information |
|---|
Probab=97.67 E-value=9.7e-05 Score=67.77 Aligned_cols=68 Identities=22% Similarity=0.347 Sum_probs=60.4
Q ss_pred chHHHHHHHHhCCCCCcccCcCcch-hhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTL-AELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVS 1088 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l-~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~ 1088 (1392)
..+.+.+++.+++ ++++++.+.+| .++|+|||..++|...++++||+.++..++ .-.|+.++++++..
T Consensus 6 ~~l~~il~~~~~~-~~~~i~~~~~l~~dlglDSl~~veli~~lE~~f~i~i~~~~~~~~~tv~~l~~~i~~ 75 (77)
T TIGR00517 6 EKVKAIIKEQLNV-DEDQVTPDASFVEDLGADSLDTVELVMALEEEFDIEIPDEEAEKIATVGDAVDYIEE 75 (77)
T ss_pred HHHHHHHHHHHCC-CHHHCCCCcchhhhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHCCcHHHHHHHHHh
Confidence 3578889999998 45789999998 589999999999999999999999999998 67899999998865
|
S (Ser) at position 37 in the seed alignment, in the motif DSLD, is the phosphopantetheine attachment site. |
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.001 Score=74.74 Aligned_cols=225 Identities=17% Similarity=0.135 Sum_probs=129.4
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCcc
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVD 863 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~ 863 (1392)
++|+||+|.+|+.+++.|.+.|.+ |..+.|+. .....+.++..|+++ +.+|..|.+++.++++ .+|
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~-V~~l~R~~-----~~~~~~~l~~~g~~v--v~~d~~~~~~l~~al~------g~d 66 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFS-VRALVRDP-----SSDRAQQLQALGAEV--VEADYDDPESLVAALK------GVD 66 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGC-EEEEESSS-----HHHHHHHHHHTTTEE--EES-TT-HHHHHHHHT------TCS
T ss_pred CEEECCccHHHHHHHHHHHhCCCC-cEEEEecc-----chhhhhhhhcccceE--eecccCCHHHHHHHHc------CCc
Confidence 589999999999999999998887 78888875 223355677788865 4899999999887765 689
Q ss_pred EEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC--CC--hhHHHHHHHHH
Q psy1119 864 GIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA--GQ--TNYGMANSIME 939 (1392)
Q Consensus 864 gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~--gq--~~Yaaana~ld 939 (1392)
.||.+-+...+ .-.....++.+++... ...+|| +||.....-.. .. ...-..|..++
T Consensus 67 ~v~~~~~~~~~----------------~~~~~~~~li~Aa~~a--gVk~~v-~ss~~~~~~~~~~~~p~~~~~~~k~~ie 127 (233)
T PF05368_consen 67 AVFSVTPPSHP----------------SELEQQKNLIDAAKAA--GVKHFV-PSSFGADYDESSGSEPEIPHFDQKAEIE 127 (233)
T ss_dssp EEEEESSCSCC----------------CHHHHHHHHHHHHHHH--T-SEEE-ESEESSGTTTTTTSTTHHHHHHHHHHHH
T ss_pred eEEeecCcchh----------------hhhhhhhhHHHhhhcc--ccceEE-EEEecccccccccccccchhhhhhhhhh
Confidence 99988765431 1123345666666554 468887 67765544211 11 12223565555
Q ss_pred HHHHHHHHcCCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccCCC-eEEehhhhhhhcCCCC
Q psy1119 940 RICEARRAEGLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEP-IVASMVVAEKKAGSGG 1018 (1392)
Q Consensus 940 ~la~~r~~~Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~~-~~~~~~~~~~~~~~~~ 1018 (1392)
++.++.|++.+.|..|.+-+-.. .. ..+ . ..+..... .........+..-...
T Consensus 128 ---~~l~~~~i~~t~i~~g~f~e~~~------~~-------~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (233)
T PF05368_consen 128 ---EYLRESGIPYTIIRPGFFMENLL------PP-------FAP---------V-VDIKKSKDVVTLPGPGNQKAVPVTD 181 (233)
T ss_dssp ---HHHHHCTSEBEEEEE-EEHHHHH------TT-------THH---------T-TCSCCTSSEEEEETTSTSEEEEEEH
T ss_pred ---hhhhhccccceeccccchhhhhh------hh-------hcc---------c-ccccccceEEEEccCCCcccccccc
Confidence 44455699988888765432100 00 000 0 00000000 0000000000000012
Q ss_pred cchHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccC
Q psy1119 1019 ATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLT 1070 (1392)
Q Consensus 1019 ~~~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~ 1070 (1392)
.+.+.+.++.+|.- ++.......+. ++.|.+..-|+..++.+.+|..+.
T Consensus 182 ~~Dvg~~va~il~~--p~~~~~~~~~~-~~~~~~t~~eia~~~s~~~G~~v~ 230 (233)
T PF05368_consen 182 TRDVGRAVAAILLD--PEKHNNGKTIF-LAGETLTYNEIAAILSKVLGKKVK 230 (233)
T ss_dssp HHHHHHHHHHHHHS--GGGTTEEEEEE-EGGGEEEHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHHHHcC--hHHhcCCEEEE-eCCCCCCHHHHHHHHHHHHCCccE
Confidence 35678888888753 34433334443 455999999999999999987653
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK05350 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00011 Score=68.22 Aligned_cols=69 Identities=16% Similarity=0.306 Sum_probs=61.7
Q ss_pred chHHHHHHHHhCCCCCcccCcCcch-hhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTL-AELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l-~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
..+.+.+++.+++ ++++|..+.+| .++|+|||..++|...|+++||+.++..++ .-.|+.++++++.+.
T Consensus 9 ~~v~~ii~~~~~~-~~~~i~~d~~l~~dlg~DSld~veli~~lE~~fgI~i~~~~~~~~~Tv~dlv~~v~~~ 79 (82)
T PRK05350 9 ERLRAILVELFEI-DPEDITPEANLYEDLDLDSIDAVDLVVHLQKLTGKKIKPEEFKSVRTVQDVVDAVERL 79 (82)
T ss_pred HHHHHHHHHHhCC-CHHHCCCCccchhhcCCCHHHHHHHHHHHHHHHCCccCHHHHhhcCcHHHHHHHHHHH
Confidence 3577888888998 55899999996 999999999999999999999999999999 778999999988754
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00045 Score=84.89 Aligned_cols=101 Identities=18% Similarity=0.269 Sum_probs=75.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCce-eeCCC-------------ccHHHH
Q psy1119 564 QKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENI-GNSRD-------------TSFEQL 629 (1392)
Q Consensus 564 ~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i-~~s~~-------------~~~~~~ 629 (1392)
.++++|+|.|+ |.+|+++++.|+.+|+.|++...++++++.+++ ++.+.+ ++.++ .++.+.
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~----lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~ 236 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS----MGAEFLELDFKEEGGSGDGYAKVMSEEFIAA 236 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCeEEeccccccccccccceeecCHHHHHH
Confidence 45799999965 999999999999999999999999998888875 455542 22211 244444
Q ss_pred HHHHcC--CCcceEEEecC---ch--h--HHHHHHhcccCCeEEEEEcc
Q psy1119 630 VMKRTK--GRGVDLVLNSL---AE--E--KLQASVRCLAQGGRFLEIGK 669 (1392)
Q Consensus 630 i~~~T~--g~GvDvVlds~---~~--~--~l~~s~~~La~~Gr~v~iG~ 669 (1392)
.++.+. .+++|+|+++. +. . ..+..++.+++|+.+|+++.
T Consensus 237 ~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~ 285 (511)
T TIGR00561 237 EMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAA 285 (511)
T ss_pred HHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeee
Confidence 444444 46799999988 32 2 35678999999999999964
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0002 Score=86.32 Aligned_cols=80 Identities=21% Similarity=0.211 Sum_probs=61.6
Q ss_pred CCCeEEEEcC----------------cchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccC
Q psy1119 780 SNKSYIICGG----------------LGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDI 843 (1392)
Q Consensus 780 ~~~~ylItGG----------------~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv 843 (1392)
.++++||||| +|++|.++|+.|+++||+ |++++++.. . + ...| +..+|+
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~-V~~v~~~~~-~-------~--~~~~----~~~~dv 251 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGAD-VTLVSGPVN-L-------P--TPAG----VKRIDV 251 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCE-EEEeCCCcc-c-------c--CCCC----cEEEcc
Confidence 6789999999 666999999999999997 777777631 1 0 0112 246799
Q ss_pred CCHHHHHHHHHHHhhcCCccEEEECcccCCCcc
Q psy1119 844 TTEAGVVNLLTEANKLGPVDGIFNLAVVLKDAL 876 (1392)
Q Consensus 844 ~~~~~v~~l~~~~~~~g~I~gvi~~Agv~~d~~ 876 (1392)
++.+++.+.+.+ .++++|++|||||+....+
T Consensus 252 ~~~~~~~~~v~~--~~~~~DilI~~Aav~d~~~ 282 (399)
T PRK05579 252 ESAQEMLDAVLA--ALPQADIFIMAAAVADYRP 282 (399)
T ss_pred CCHHHHHHHHHH--hcCCCCEEEEccccccccc
Confidence 999998887763 4789999999999876554
|
|
| >KOG4022|consensus | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0042 Score=62.87 Aligned_cols=153 Identities=20% Similarity=0.283 Sum_probs=100.7
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
.+.++|-||-|.+|.++.+++-.++.- |.-+.-+. + ++.... .++..|-+=.++-+.+++++ +.+
T Consensus 3 agrVivYGGkGALGSacv~~Fkannyw-V~siDl~e--N----------e~Ad~s-I~V~~~~swtEQe~~v~~~vg~sL 68 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYW-VLSIDLSE--N----------EQADSS-ILVDGNKSWTEQEQSVLEQVGSSL 68 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeE-EEEEeecc--c----------ccccce-EEecCCcchhHHHHHHHHHHHHhh
Confidence 367899999999999999999988875 33333221 1 111222 33456666667777888887 444
Q ss_pred --CCccEEEECcccCCCc------cccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhH
Q psy1119 860 --GPVDGIFNLAVVLKDA------LFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 860 --g~I~gvi~~Agv~~d~------~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
..+|+||+-||-..-+ .+.|.+. -|...+=.-. .-.++...+.++.+..-+..--++.-|.||...|
T Consensus 69 ~gekvDav~CVAGGWAGGnAksKdl~KNaDL-MwKQSvwtSa----Isa~lAt~HLK~GGLL~LtGAkaAl~gTPgMIGY 143 (236)
T KOG4022|consen 69 QGEKVDAVFCVAGGWAGGNAKSKDLVKNADL-MWKQSVWTSA----ISAKLATTHLKPGGLLQLTGAKAALGGTPGMIGY 143 (236)
T ss_pred cccccceEEEeeccccCCCcchhhhhhchhh-HHHHHHHHHH----HHHHHHHhccCCCceeeecccccccCCCCcccch
Confidence 3899999999864332 2233222 2222221111 1112223345667777777778888899999999
Q ss_pred HHHHHHHHHHHHHHHHc--CCCe
Q psy1119 932 GMANSIMERICEARRAE--GLPG 952 (1392)
Q Consensus 932 aaana~ld~la~~r~~~--Glp~ 952 (1392)
++||+++..|++.+..+ |+|.
T Consensus 144 GMAKaAVHqLt~SLaak~SGlP~ 166 (236)
T KOG4022|consen 144 GMAKAAVHQLTSSLAAKDSGLPD 166 (236)
T ss_pred hHHHHHHHHHHHHhcccccCCCC
Confidence 99999999999998765 8883
|
|
| >PRK12449 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00023 Score=65.84 Aligned_cols=69 Identities=19% Similarity=0.307 Sum_probs=61.3
Q ss_pred chHHHHHHHHhCCCCCcccCcCcch-hhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTL-AELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l-~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
..+.+.+++.+++. .+.+.++.+| .++|+||+..++|...++++||+.++..++ ...|+.++++++...
T Consensus 8 ~~l~~il~~~~~~~-~~~i~~~~~l~~dlg~DSl~~~~li~~lE~~f~i~i~~~~~~~~~ti~~l~~~l~~~ 78 (80)
T PRK12449 8 ERLINLIQKQRSYL-SLAITEQTHLKDDLAVDSIELVEFIINVEDEFHIAIPDEDVEDMVSMGDLLDYLVQR 78 (80)
T ss_pred HHHHHHHHHHhCCC-ccccCCCCcHHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHHh
Confidence 35778888999974 4789999999 699999999999999999999999999999 789999999987653
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00029 Score=78.63 Aligned_cols=98 Identities=18% Similarity=0.209 Sum_probs=61.6
Q ss_pred CceeEeecCCCccccccHHHHhhcCC---------ceEEEecC--CCCC---CCCHHHHHHHHHHHHh---hh---ccCC
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINA---------QVLVFQFD--HTNP---PDTIPEMADSLLPHFK---KR---LVHG 1216 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~---------~~~v~~l~--~e~~---~~sieelA~~y~~~I~---~~---q~qp 1216 (1392)
+.|+++||+-+|+...++.++..+.. ...++.++ .+.. -..+.+-++...+.|+ +. ...+
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~~ 83 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRPP 83 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccCC
Confidence 57999999999999888888877721 23444443 2111 1233333333333222 11 0246
Q ss_pred CCcEEEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1217 TDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1217 ~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
..+..|+||||||++|..+...-......+ .++.++++
T Consensus 84 ~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 84 PRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred CCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 678999999999999999887655444556 56666654
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00033 Score=84.27 Aligned_cols=137 Identities=17% Similarity=0.153 Sum_probs=96.0
Q ss_pred ccCCCCeEEEEcCcchHHHHHHHHHHHh--CCceEEEecCCCcccHHHHHHH--------HHHhc-CC---ceEEEEecc
Q psy1119 777 YADSNKSYIICGGLGGFGLELADWLVLR--GARKLVLTSRSGVKNGYQALRI--------KIWKS-YD---VQVLISTDD 842 (1392)
Q Consensus 777 ~~~~~~~ylItGG~gGiG~~lA~~La~~--GAr~lvl~sRs~~~~~~~~~~~--------~~l~~-~G---~~v~~~~~D 842 (1392)
.|..+|+++||||+|-+|..+.++|.+. ..++|.++-|........++.. +.+++ .| .++..+.+|
T Consensus 8 ~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD 87 (467)
T KOG1221|consen 8 QFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD 87 (467)
T ss_pred HHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence 4678999999999999999999999865 5777888877653332222211 12222 22 578889999
Q ss_pred CCCHHHHHHHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccc
Q psy1119 843 ITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSC 921 (1392)
Q Consensus 843 v~~~~~v~~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~ 921 (1392)
+++++---+.-+...-...|+.|||+|+..+. .|-.+..+..|+.|+.++-+.+.. |.+++.||.+|..-+
T Consensus 88 i~~~~LGis~~D~~~l~~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~~l~lak~-~~~l~~~vhVSTAy~ 158 (467)
T KOG1221|consen 88 ISEPDLGISESDLRTLADEVNIVIHSAATVRF-------DEPLDVALGINTRGTRNVLQLAKE-MVKLKALVHVSTAYS 158 (467)
T ss_pred ccCcccCCChHHHHHHHhcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHHHHHHHHH-hhhhheEEEeehhhe
Confidence 98764211110100112379999999986553 356788899999999999998876 478999999998544
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00099 Score=80.95 Aligned_cols=80 Identities=14% Similarity=0.270 Sum_probs=49.2
Q ss_pred CceeEeecCCCccccc-c-HHHHhhc-CCceEEEecC----CCCC--------CCCHHHHHHHHHHHHhhhccCCCCcEE
Q psy1119 1157 NNTIFMVPGIEGIATV-L-EPLAKNI-NAQVLVFQFD----HTNP--------PDTIPEMADSLLPHFKKRLVHGTDEIK 1221 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~-y-~~La~~L-~~~~~v~~l~----~e~~--------~~sieelA~~y~~~I~~~q~qp~gPy~ 1221 (1392)
+++|+++|+.+|+... | ..++..+ .....++.++ +..+ ....+++. ..++.++.. .|..|+.
T Consensus 100 ~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~-~~i~~l~~~--~~~~~~~ 176 (388)
T PLN02511 100 APVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLR-QVVDHVAGR--YPSANLY 176 (388)
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHH-HHHHHHHHH--CCCCCEE
Confidence 4679999999887743 4 4455443 4455666654 1111 01233332 334555533 2567999
Q ss_pred EEeechhHHHHHHHHHHH
Q psy1119 1222 LVGFSFGGMVALELAIKL 1239 (1392)
Q Consensus 1222 L~G~S~Gg~VA~EmA~~L 1239 (1392)
++||||||.++...+.+-
T Consensus 177 lvG~SlGg~i~~~yl~~~ 194 (388)
T PLN02511 177 AAGWSLGANILVNYLGEE 194 (388)
T ss_pred EEEechhHHHHHHHHHhc
Confidence 999999999998877553
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0028 Score=75.40 Aligned_cols=83 Identities=17% Similarity=0.307 Sum_probs=58.9
Q ss_pred ceeEeecCCCcccc-c------------------------c-HHHHhhcC-CceEEEecC----CC-C-----C--CCCH
Q psy1119 1158 NTIFMVPGIEGIAT-V------------------------L-EPLAKNIN-AQVLVFQFD----HT-N-----P--PDTI 1198 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~-~------------------------y-~~La~~L~-~~~~v~~l~----~e-~-----~--~~si 1198 (1392)
.-++++|+.++... . | ..|++.|. ....|+.++ +. . . ..++
T Consensus 22 g~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~ 101 (332)
T TIGR01607 22 GIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINCF 101 (332)
T ss_pred EEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCccccccccchhhH
Confidence 46899999999885 1 2 47888885 457777775 11 1 1 1478
Q ss_pred HHHHHHHHHHHhhhc--------------------cCC-CCcEEEEeechhHHHHHHHHHHHH
Q psy1119 1199 PEMADSLLPHFKKRL--------------------VHG-TDEIKLVGFSFGGMVALELAIKLE 1240 (1392)
Q Consensus 1199 eelA~~y~~~I~~~q--------------------~qp-~gPy~L~G~S~Gg~VA~EmA~~Le 1240 (1392)
++++++..+.++... ..| ..|..|+||||||+|+...+.++.
T Consensus 102 ~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~ 164 (332)
T TIGR01607 102 DDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLG 164 (332)
T ss_pred HHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhc
Confidence 888887777665320 123 569999999999999998887664
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00097 Score=87.10 Aligned_cols=139 Identities=14% Similarity=0.124 Sum_probs=94.5
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
...+|||||+|=||.++++.|.++|.. +. +..+|++|.+.+.++++..
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~-v~---------------------------~~~~~l~d~~~v~~~i~~~---- 427 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIA-YE---------------------------YGKGRLEDRSSLLADIRNV---- 427 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCe-EE---------------------------eeccccccHHHHHHHHHhh----
Confidence 457999999999999999999999975 31 1124678888887776653
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccC----------------
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRG---------------- 924 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G---------------- 924 (1392)
..|.|||+|+....... +...++-...++.|+.|+.+|.++++.. .. .+|++||.+..-+
T Consensus 428 ~pd~Vih~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~~~--g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~ 503 (668)
T PLN02260 428 KPTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCREN--GL-LMMNFATGCIFEYDAKHPEGSGIGFKEED 503 (668)
T ss_pred CCCEEEECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHHHHHHHc--CC-eEEEEcccceecCCcccccccCCCCCcCC
Confidence 57999999986532111 2223344677889999999999988764 23 3566766432111
Q ss_pred --CCCChhHHHHHHHHHHHHHHHHHcCCCeEEEEc
Q psy1119 925 --NAGQTNYGMANSIMERICEARRAEGLPGLAVEW 957 (1392)
Q Consensus 925 --~~gq~~Yaaana~ld~la~~r~~~Glp~~ai~~ 957 (1392)
++..+.|+.+|.+.+.+++... ..-.+.+.|
T Consensus 504 ~~~~~~~~Yg~sK~~~E~~~~~~~--~~~~~r~~~ 536 (668)
T PLN02260 504 KPNFTGSFYSKTKAMVEELLREYD--NVCTLRVRM 536 (668)
T ss_pred CCCCCCChhhHHHHHHHHHHHhhh--hheEEEEEE
Confidence 0112679999999999997532 223344555
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00027 Score=82.12 Aligned_cols=85 Identities=14% Similarity=0.162 Sum_probs=62.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.+++++|+|+ ||+|+++|..|++.|+++|++++|+....+..++..+++...+..+.+..+|+++.+++.+.++
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~----- 198 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA----- 198 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc-----
Confidence 4689999998 7999999999999999999999998521123344455555544455666789888777765443
Q ss_pred CCccEEEECccc
Q psy1119 860 GPVDGIFNLAVV 871 (1392)
Q Consensus 860 g~I~gvi~~Agv 871 (1392)
..|.|||+.-+
T Consensus 199 -~~DilINaTp~ 209 (289)
T PRK12548 199 -SSDILVNATLV 209 (289)
T ss_pred -cCCEEEEeCCC
Confidence 45999998754
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00042 Score=76.54 Aligned_cols=163 Identities=22% Similarity=0.146 Sum_probs=112.5
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
.|++||||=+|-=|.-||+.|.++|...-=+..|+...+.....+.+.-...+.++...-+|++|...+.++++.+
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---- 77 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---- 77 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence 5799999999999999999999999984445555433222211122222234567889999999999999999987
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccC------------CCCC
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRG------------NAGQ 928 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G------------~~gq 928 (1392)
.-|-|+|.|+.. +-..|.++=....+....|+.+|-++.+-+.++.-.|..-|| |-..| ....
T Consensus 78 ~PdEIYNLaAQS----~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQASt-SE~fG~v~~~pq~E~TPFyPr 152 (345)
T COG1089 78 QPDEIYNLAAQS----HVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQAST-SELYGLVQEIPQKETTPFYPR 152 (345)
T ss_pred Cchhheeccccc----cccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEeccc-HHhhcCcccCccccCCCCCCC
Confidence 456789988743 334445555566778888999999998876533344554444 33333 2345
Q ss_pred hhHHHHHHHHHHHH-HHHHHcCCCe
Q psy1119 929 TNYGMANSIMERIC-EARRAEGLPG 952 (1392)
Q Consensus 929 ~~Yaaana~ld~la-~~r~~~Glp~ 952 (1392)
+.||+||-+-.-++ .||.+-|+-+
T Consensus 153 SPYAvAKlYa~W~tvNYResYgl~A 177 (345)
T COG1089 153 SPYAVAKLYAYWITVNYRESYGLFA 177 (345)
T ss_pred CHHHHHHHHHHheeeehHhhcCcee
Confidence 78999998877654 4666667754
|
|
| >PRK07117 acyl carrier protein; Validated | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00025 Score=65.07 Aligned_cols=67 Identities=19% Similarity=0.276 Sum_probs=60.2
Q ss_pred hHHHHHHHHh-CCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhc
Q psy1119 1021 NIVDAVINIL-GLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVS 1088 (1392)
Q Consensus 1021 ~l~~~~a~~l-~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~ 1088 (1392)
.+.+.+++.+ ++ ++++|.++.+|.+||.|||-.+++...++++||+.+|-.++ .-.|+.++..++.+
T Consensus 9 ~v~~ii~e~~p~i-~~~~I~~~~~l~DLg~DSlD~veiv~~led~f~i~I~~~~~~~i~Tv~d~v~~i~~ 77 (79)
T PRK07117 9 ILVRHIREVLPDL-DQHQFQPEDSLVDLGANSMDRAEIVIMTLESLSLKIPLVEFAGAKNIGELADLLYA 77 (79)
T ss_pred HHHHHHHHHcCCC-CHHHCCCCCChhhcCCChHHHHHHHHHHHHHHCCccCHHHHHhcCCHHHHHHHHHH
Confidence 5778888999 67 56899999999999999999999999999999999999999 56799999988764
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.002 Score=80.41 Aligned_cols=99 Identities=16% Similarity=0.282 Sum_probs=62.9
Q ss_pred CCceeEeecCCCccccccH-----HHHhhcCC-ceEEEecC--C---CCCCCCHHHHHHH-H---HHHHhhhccCCCCcE
Q psy1119 1156 NNNTIFMVPGIEGIATVLE-----PLAKNINA-QVLVFQFD--H---TNPPDTIPEMADS-L---LPHFKKRLVHGTDEI 1220 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~-----~La~~L~~-~~~v~~l~--~---e~~~~sieelA~~-y---~~~I~~~q~qp~gPy 1220 (1392)
.++||++|||......+|. .++++|.. ...|+.+. + .....++++.+.. + ++.+++. .+..+.
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~--~g~~kv 264 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAI--TGEKQV 264 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHh--cCCCCe
Confidence 3589999999988777774 78888864 46666665 1 1112234444432 2 3444432 256789
Q ss_pred EEEeechhHHHHHHHHHHHHHcC--Ccc-EEEEEeCCCC
Q psy1119 1221 KLVGFSFGGMVALELAIKLEQLG--TKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1221 ~L~G~S~Gg~VA~EmA~~Le~~G--~~v-~LvLiD~~p~ 1256 (1392)
+++||||||.++.-.+..+.+.+ ..+ .++++.+...
T Consensus 265 ~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 265 NCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLD 303 (532)
T ss_pred EEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcC
Confidence 99999999998765444444444 345 6888877544
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PRK05828 acyl carrier protein; Validated | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00038 Score=64.64 Aligned_cols=67 Identities=19% Similarity=0.266 Sum_probs=56.2
Q ss_pred HHHHHHH-HhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1022 IVDAVIN-ILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1022 l~~~~a~-~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
+.+.+++ -+.+ +++.+..+.+|.+||+|||-.++|...|+++||+.+|-.++ .-.|+.++..++...
T Consensus 10 i~~ii~e~~~~~-~~d~i~~~~~~~dLg~DSLd~velv~~lE~~f~I~i~~e~~~~i~Tv~d~~~~v~~~ 78 (84)
T PRK05828 10 IKEIAKKKNFAV-TLDESNINKPYRELKIDSLDMFSIIVSLESEFNIEFSDEKLMKLKNLADLILEVKEL 78 (84)
T ss_pred HHHHHHHhccCC-CcccccCCCCHHhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHH
Confidence 4455554 3454 45788899999999999999999999999999999999998 678999999887654
|
|
| >PRK07639 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00046 Score=64.56 Aligned_cols=70 Identities=19% Similarity=0.303 Sum_probs=59.8
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchhh-cCcchhhHHHHHHHHHHHhCCccChhhhc---cCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLAE-LGMDSMMAVEIKQTLEREFEVFLTPQDIR---GLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~~-lG~DSL~avel~~~l~~~~~~~l~~~~i~---~~ti~~La~~~~~~ 1089 (1392)
..+.+.+++.+++.+.+++.++.+|.+ +|+|||.+++|...|+.+||+.+|..++. -.|+..+++++...
T Consensus 8 ~~i~~il~e~l~~~~~~~i~~d~~l~edL~lDSld~velv~~lE~~fgi~i~d~~~~~~~~~Tv~~l~~~i~~~ 81 (86)
T PRK07639 8 NAVLKIMEEKLELKNVTHLEETMRLNEDLYIDSVMMLQLIVYIEMDVKLCVPEDEVDPKAFLTVGSLLDFMEEL 81 (86)
T ss_pred HHHHHHHHHHhCCCccccCCCCCCcccccCCChHHHHHHHHHHHHHHCCccCHHHccHHHhCCHHHHHHHHHHh
Confidence 357788889998855578999999954 99999999999999999999999998872 35899999988764
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0029 Score=73.10 Aligned_cols=93 Identities=15% Similarity=0.106 Sum_probs=57.4
Q ss_pred CceeEeecCCCc----cccccHHHHhhcCC-ceEEEecC----C--CCCCCCHHHHHHHHHHHHhhhccC-C-CCcEEEE
Q psy1119 1157 NNTIFMVPGIEG----IATVLEPLAKNINA-QVLVFQFD----H--TNPPDTIPEMADSLLPHFKKRLVH-G-TDEIKLV 1223 (1392)
Q Consensus 1157 ~~pLF~vp~agG----~~~~y~~La~~L~~-~~~v~~l~----~--e~~~~sieelA~~y~~~I~~~q~q-p-~gPy~L~ 1223 (1392)
+++++++|++.+ ....|..+++.|.. .+.++.++ + .....+++...+++.+.+....-+ | ..+..++
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~ 105 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLGFEGIDADIAAAIDAFREAAPHLRRIVAW 105 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCCcEEEE
Confidence 357888887553 33346778888864 47777765 1 122246666666555555422101 2 2358999
Q ss_pred eechhHHHHHHHHHHHHHcCCcc-EEEEEeC
Q psy1119 1224 GFSFGGMVALELAIKLEQLGTKC-HLYLVDS 1253 (1392)
Q Consensus 1224 G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~ 1253 (1392)
||||||.+|+..|.. . ..+ .++++++
T Consensus 106 G~S~Gg~~a~~~a~~---~-~~v~~lil~~p 132 (274)
T TIGR03100 106 GLCDAASAALLYAPA---D-LRVAGLVLLNP 132 (274)
T ss_pred EECHHHHHHHHHhhh---C-CCccEEEEECC
Confidence 999999999988742 1 345 7777764
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0013 Score=75.90 Aligned_cols=175 Identities=18% Similarity=0.211 Sum_probs=99.4
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHc-CC
Q psy1119 560 CGQMQKGESILIHAGSGGVGQAAINLARYMDA--EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRT-KG 636 (1392)
Q Consensus 560 ~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga--~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T-~g 636 (1392)
.+.+++|++||.. |+|+ |..++++++..|. +|+++..+++..+.+++.....+...+- ....++ .... ..
T Consensus 72 ~~~~~~g~~VLDi-G~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d~----~~l~~~~ 144 (272)
T PRK11873 72 LAELKPGETVLDL-GSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGEI----EALPVAD 144 (272)
T ss_pred hccCCCCCEEEEe-CCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcch----hhCCCCC
Confidence 3578899999999 4566 8888888888775 6999999999888887653222222221 111122 1111 23
Q ss_pred CcceEEEecC------c-hhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHH
Q psy1119 637 RGVDLVLNSL------A-EEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQ 709 (1392)
Q Consensus 637 ~GvDvVlds~------~-~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~ 709 (1392)
.++|+|+... . ...+....++|+|||+++..+..... .+.. .+.+...+.+....... .. .+
T Consensus 145 ~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~--~~---~e-- 213 (272)
T PRK11873 145 NSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG---ELPE-EIRNDAELYAGCVAGAL--QE---EE-- 213 (272)
T ss_pred CceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC---CCCH-HHHHhHHHHhccccCCC--CH---HH--
Confidence 4799998532 1 24688999999999999986543211 1111 11111111110000000 11 11
Q ss_pred HHHHHHHHc-CC--CCCcceeeeccccHHHHHHHH--HcCCccceEEEEe
Q psy1119 710 KALQKAIDA-GA--VQPLVRTIFPEDKVEEAFRYM--AAGKHIGKVIIKI 754 (1392)
Q Consensus 710 ~~~~~~l~~-g~--l~pl~~~vf~l~ev~eA~~~l--~~g~~~GKvVI~~ 754 (1392)
+.+++.+ |- ++......++++++.++++.+ ..++..++.+...
T Consensus 214 --~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (272)
T PRK11873 214 --YLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIVSA 261 (272)
T ss_pred --HHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEEEE
Confidence 2223333 32 222345668889999999988 6666666655544
|
|
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0047 Score=70.82 Aligned_cols=175 Identities=12% Similarity=0.062 Sum_probs=128.2
Q ss_pred CeEEEEcC-cchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh-c
Q psy1119 782 KSYIICGG-LGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK-L 859 (1392)
Q Consensus 782 ~~ylItGG-~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~-~ 859 (1392)
.+++|.|. .--|++.+|.-|-+||.- |+++..+. +....++.- .. ..+.....|..++..+...+.+... +
T Consensus 4 evVvI~Gs~~~PltR~la~DLeRRGFI-V~v~~~~~----ed~~~ve~e-~~-~dI~~L~ld~~~~~~~~~~l~~f~~~L 76 (299)
T PF08643_consen 4 EVVVIAGSPHDPLTRSLALDLERRGFI-VYVTVSSA----EDEKYVESE-DR-PDIRPLWLDDSDPSSIHASLSRFASLL 76 (299)
T ss_pred eEEEEECCCCCccHHHHHHHHhhCCeE-EEEEeCCH----HHHHHHHhc-cC-CCCCCcccCCCCCcchHHHHHHHHHHh
Confidence 46788885 689999999999999985 44555442 222223322 22 2366677788777776666665421 1
Q ss_pred --C------------CccEEEECccc-CCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC-----CCeEEEeccc
Q psy1119 860 --G------------PVDGIFNLAVV-LKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT-----LGQFVVFSSV 919 (1392)
Q Consensus 860 --g------------~I~gvi~~Agv-~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~-----l~~fV~~SS~ 919 (1392)
+ .+.+||..... ...+++++++.++|...++.++.-.+...+.+.+++.. ...+++.-|+
T Consensus 77 ~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi 156 (299)
T PF08643_consen 77 SRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSI 156 (299)
T ss_pred cCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCch
Confidence 2 46777765542 35789999999999999999999999888877666533 3456666689
Q ss_pred ccccCCCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccCcc
Q psy1119 920 SCGRGNAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVGEV 963 (1392)
Q Consensus 920 s~~~G~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~~~ 963 (1392)
.+-++.|-++.-++..++|.+|++.++++ +++.+-+++|...-.
T Consensus 157 ~ssl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~ 204 (299)
T PF08643_consen 157 SSSLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG 204 (299)
T ss_pred hhccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence 99999999999999999999999888776 588999999987544
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0011 Score=84.78 Aligned_cols=131 Identities=15% Similarity=0.184 Sum_probs=86.2
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
.++||||+|-||..+++.|.++|.+ |+.++|+... .. ...+.++.+|+++.. +.+++ ..+
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~-Vi~ldr~~~~----------~~--~~~ve~v~~Dl~d~~-l~~al------~~~ 61 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHT-VSGIAQHPHD----------AL--DPRVDYVCASLRNPV-LQELA------GEA 61 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCE-EEEEeCChhh----------cc--cCCceEEEccCCCHH-HHHHh------cCC
Confidence 5899999999999999999999986 7777775311 01 124667899999973 33332 258
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHHHH
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERIC 942 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~la 942 (1392)
|.|||+|+...+. ....++.|+.|+.+++... .. .||++||.. |.+ ..|.. .+.++
T Consensus 62 D~VIHLAa~~~~~------------~~~vNv~Gt~nLleAA~~~--Gv-RiV~~SS~~---G~~--~~~~~----aE~ll 117 (699)
T PRK12320 62 DAVIHLAPVDTSA------------PGGVGITGLAHVANAAARA--GA-RLLFVSQAA---GRP--ELYRQ----AETLV 117 (699)
T ss_pred CEEEEcCccCccc------------hhhHHHHHHHHHHHHHHHc--CC-eEEEEECCC---CCC--ccccH----HHHHH
Confidence 9999999863211 1146899999998887653 22 688888763 332 12432 33333
Q ss_pred HHHHHcCCCeEEEEcccc
Q psy1119 943 EARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 943 ~~r~~~Glp~~ai~~g~~ 960 (1392)
. ..++|.+.+....+
T Consensus 118 ~---~~~~p~~ILR~~nV 132 (699)
T PRK12320 118 S---TGWAPSLVIRIAPP 132 (699)
T ss_pred H---hcCCCEEEEeCcee
Confidence 2 23577766665543
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0018 Score=78.56 Aligned_cols=145 Identities=17% Similarity=0.122 Sum_probs=90.2
Q ss_pred CCeEEEE----cCcchHHHHHHHHHHHhCCceEEEecCCCcccHHH----HHHHHHHhcCCceEEEEeccCCCHHHHHHH
Q psy1119 781 NKSYIIC----GGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQ----ALRIKIWKSYDVQVLISTDDITTEAGVVNL 852 (1392)
Q Consensus 781 ~~~ylIt----GG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~----~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l 852 (1392)
.+++||| ||+|-||..+++.|+++|.. |++++|+....... ......+...| +..+.+|++| +.++
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~l~~~~--v~~v~~D~~d---~~~~ 125 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHE-VTLFTRGKEPSQKMKKEPFSRFSELSSAG--VKTVWGDPAD---VKSK 125 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCE-EEEEecCCcchhhhccCchhhhhHhhhcC--ceEEEecHHH---HHhh
Confidence 3679999 99999999999999999986 77788875321110 00112333334 5567788866 3333
Q ss_pred HHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCCh---
Q psy1119 853 LTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQT--- 929 (1392)
Q Consensus 853 ~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~--- 929 (1392)
+. ....|.|||+++. . ..++.+|.+++... ...+||++||....-...+..
T Consensus 126 ~~----~~~~d~Vi~~~~~---------~-----------~~~~~~ll~aa~~~--gvkr~V~~SS~~vyg~~~~~p~~E 179 (378)
T PLN00016 126 VA----GAGFDVVYDNNGK---------D-----------LDEVEPVADWAKSP--GLKQFLFCSSAGVYKKSDEPPHVE 179 (378)
T ss_pred hc----cCCccEEEeCCCC---------C-----------HHHHHHHHHHHHHc--CCCEEEEEccHhhcCCCCCCCCCC
Confidence 31 2368999999762 1 22456666666432 457899999975432111110
Q ss_pred ----hHHHHHHHHHHHHHHHHHcCCCeEEEEcccc
Q psy1119 930 ----NYGMANSIMERICEARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 930 ----~Yaaana~ld~la~~r~~~Glp~~ai~~g~~ 960 (1392)
....+|...+.+.+ ..|++.+.+..+.+
T Consensus 180 ~~~~~p~~sK~~~E~~l~---~~~l~~~ilRp~~v 211 (378)
T PLN00016 180 GDAVKPKAGHLEVEAYLQ---KLGVNWTSFRPQYI 211 (378)
T ss_pred CCcCCCcchHHHHHHHHH---HcCCCeEEEeceeE
Confidence 01126777776653 46889888877654
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0027 Score=70.54 Aligned_cols=216 Identities=18% Similarity=0.198 Sum_probs=127.3
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCcc
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVD 863 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~ 863 (1392)
++||||+|=||++|+..|.+.|.. |.+++|+....... ....| ...+.+. .... .++|
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~-v~iltR~~~~~~~~---------~~~~v-------~~~~~~~----~~~~-~~~D 58 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQ-VTILTRRPPKASQN---------LHPNV-------TLWEGLA----DALT-LGID 58 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCe-EEEEEcCCcchhhh---------cCccc-------cccchhh----hccc-CCCC
Confidence 589999999999999999999986 88888886432211 01111 1111111 1111 1799
Q ss_pred EEEECcccCCCccccC-CCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHH----HHHHHH
Q psy1119 864 GIFNLAVVLKDALFEN-QTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYG----MANSIM 938 (1392)
Q Consensus 864 gvi~~Agv~~d~~~~~-~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Ya----aana~l 938 (1392)
+|||.||.. .++. -|.+.=+..++.-+..|..|.++......+ -....-+|..|+.|..+...|. +++.|+
T Consensus 59 avINLAG~~---I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~-P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fl 134 (297)
T COG1090 59 AVINLAGEP---IAERRWTEKQKEEIRQSRINTTEKLVELIAASETK-PKVLISASAVGYYGHSGDRVVTEESPPGDDFL 134 (297)
T ss_pred EEEECCCCc---cccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCC-CcEEEecceEEEecCCCceeeecCCCCCCChH
Confidence 999999952 2333 566666778888899999998877643222 2233345667888877766553 667888
Q ss_pred HHHHHHHHHc-------CCCeEEEEcccc--CccccccchhhhhHHHHHcC--------ccccchhhhHHHHHHHHccCC
Q psy1119 939 ERICEARRAE-------GLPGLAVEWGAV--GEVGLVADMAEDNLEVVIGG--------TLQQRISNCLECLNEFLIQSE 1001 (1392)
Q Consensus 939 d~la~~r~~~-------Glp~~ai~~g~~--~~~G~~~~~~~~~~~~~~~g--------~~~~~~~~~l~~l~~~l~~~~ 1001 (1392)
..+|+..-.+ |...+-+-.|.+ .+.|+...+.... ..-.+| +.-+.+++..+.+..++.+..
T Consensus 135 a~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~f-k~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~ 213 (297)
T COG1090 135 AQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLF-KLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQ 213 (297)
T ss_pred HHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchh-hhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcC
Confidence 8888866544 334444444443 2456665543221 111222 122467777888887776531
Q ss_pred ---CeEEehhhhhhhcCCCCcchHHHHHHHHhCC
Q psy1119 1002 ---PIVASMVVAEKKAGSGGATNIVDAVINILGL 1032 (1392)
Q Consensus 1002 ---~~~~~~~~~~~~~~~~~~~~l~~~~a~~l~~ 1032 (1392)
|+-...+ ..-....+.+.+++.|+-
T Consensus 214 lsGp~N~taP------~PV~~~~F~~al~r~l~R 241 (297)
T COG1090 214 LSGPFNLTAP------NPVRNKEFAHALGRALHR 241 (297)
T ss_pred CCCcccccCC------CcCcHHHHHHHHHHHhCC
Confidence 1100000 001134677888888874
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0036 Score=76.59 Aligned_cols=186 Identities=11% Similarity=0.049 Sum_probs=92.5
Q ss_pred ceeEeecCCCccc--cccHHHHhhcCC-ceEEEecC----CCC----CCCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1158 NTIFMVPGIEGIA--TVLEPLAKNINA-QVLVFQFD----HTN----PPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1158 ~pLF~vp~agG~~--~~y~~La~~L~~-~~~v~~l~----~e~----~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
.|++++|++.++. ..|..+++.|.. .+.|+.++ ++. ...+...+....++.+.....-...+..++|||
T Consensus 194 ~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S 273 (414)
T PRK05077 194 FPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFR 273 (414)
T ss_pred ccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcccCcccEEEEEEC
Confidence 5666666665553 467777777754 47777776 111 113455555556666653200123579999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCcc---ccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHHHHHHH
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLT---SLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRIT 1302 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~---~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 1302 (1392)
|||.+|..+|..- ...+ .++++++....... .....+. ...+.+...+.... .+.+.+...+..+ .
T Consensus 274 ~GG~~Al~~A~~~---p~ri~a~V~~~~~~~~~~~~~~~~~~~p~--~~~~~la~~lg~~~-~~~~~l~~~l~~~----s 343 (414)
T PRK05077 274 FGANVAVRLAYLE---PPRLKAVACLGPVVHTLLTDPKRQQQVPE--MYLDVLASRLGMHD-ASDEALRVELNRY----S 343 (414)
T ss_pred hHHHHHHHHHHhC---CcCceEEEEECCccchhhcchhhhhhchH--HHHHHHHHHhCCCC-CChHHHHHHhhhc----c
Confidence 9999999887531 2234 55555543221100 0000110 01111111111111 1222121111111 0
Q ss_pred hhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEccCccc
Q psy1119 1303 SILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDGNHFT 1356 (1392)
Q Consensus 1303 ~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G~H~~ 1356 (1392)
.... ..-..++++|++++.+++|. ...+....+.+... ..++..+|+.|.+
T Consensus 344 l~~~--~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~-~~~l~~i~~~~~~ 395 (414)
T PRK05077 344 LKVQ--GLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSA-DGKLLEIPFKPVY 395 (414)
T ss_pred chhh--hhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCC-CCeEEEccCCCcc
Confidence 0000 00013688999999999998 55454444444332 3567889987644
|
|
| >PRK08172 putative acyl carrier protein IacP; Validated | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00055 Score=63.39 Aligned_cols=69 Identities=19% Similarity=0.329 Sum_probs=62.0
Q ss_pred chHHHHHHHHhCCCCCcccCcCcch-hhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTL-AELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l-~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
..+.+.+++.|++ ++++|.++.+| .++|.|||..++|...|+++||+.++..++ .-.|+.++..++.+.
T Consensus 7 ~~v~~iiae~l~v-~~~~i~~d~~l~~dL~~DSld~v~lv~~lEe~F~I~i~~~d~~~i~Tv~di~~~v~~~ 77 (82)
T PRK08172 7 ARVKKVITSCIAV-DVDSINGQTHLVEDLYADSLDLIDIVFGLSEEFDISCNENDLPDMTTFADICRVVKKS 77 (82)
T ss_pred HHHHHHHHHHHCC-CHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHHHH
Confidence 3578899999998 56899999999 889999999999999999999999999999 567999999887764
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0019 Score=74.45 Aligned_cols=190 Identities=16% Similarity=0.215 Sum_probs=101.2
Q ss_pred ceeEeecCCCccccccHHHHhhcCC-ceEEEecC--C--CCCC-----CCHHHHHHHH---HHHHhhhccCCCCcEEEEe
Q psy1119 1158 NTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD--H--TNPP-----DTIPEMADSL---LPHFKKRLVHGTDEIKLVG 1224 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~--~--e~~~-----~sieelA~~y---~~~I~~~q~qp~gPy~L~G 1224 (1392)
+.+++.|+.++.-..|..+|+.|.. .+.++.++ + .... .++..-..++ ++.+++. ...+..|+|
T Consensus 38 ~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~---~~~~I~LiG 114 (307)
T PRK13604 38 NTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTR---GINNLGLIA 114 (307)
T ss_pred CEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhc---CCCceEEEE
Confidence 4678899999987779999999964 57888876 1 1111 1111123333 3334422 345799999
Q ss_pred echhHHHHHHHHHHHHHcCCccEEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCcc-ccCCHHH------HHHHHHHH
Q psy1119 1225 FSFGGMVALELAIKLEQLGTKCHLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPED-ATHSRTY------QRNLAHAA 1297 (1392)
Q Consensus 1225 ~S~Gg~VA~EmA~~Le~~G~~v~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~-~~~~~~~------l~~~~~~~ 1297 (1392)
|||||.+|+.+|.. .++..+++|++.......+ +..+.+....++.. .+...++ ...++...
T Consensus 115 ~SmGgava~~~A~~-----~~v~~lI~~sp~~~l~d~l------~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~ 183 (307)
T PRK13604 115 ASLSARIAYEVINE-----IDLSFLITAVGVVNLRDTL------ERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDC 183 (307)
T ss_pred ECHHHHHHHHHhcC-----CCCCEEEEcCCcccHHHHH------HHhhhcccccCcccccccccccccccccHHHHHHHH
Confidence 99999999777651 2366677777643321110 00011000001100 0000000 11222111
Q ss_pred HH-HHHhhccccCC-CCCcccceEEEEeeCCCC-CCChhhcCccc-ccCCCeEEEEEccCccccccChHH
Q psy1119 1298 YK-RITSILKYTDP-KHKAFGGNITLLRPTEQA-LPTAEDYGLSK-VCKKPVKVHFVDGNHFTVLDNIKS 1363 (1392)
Q Consensus 1298 ~~-~~~~~~~y~~~-~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~-~~~g~v~v~~v~G~H~~ml~~~~~ 1363 (1392)
++ ++. ..-.|. ....++.|++++.+++|. +.......+-+ +..++.+.+.+||.-+.+.++.-+
T Consensus 184 ~~~~~~--~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~~~~~ 251 (307)
T PRK13604 184 FKHGWD--TLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGENLVV 251 (307)
T ss_pred HhcCcc--ccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCcchHH
Confidence 11 000 000111 123578999999999998 66555555444 334789999999865556666543
|
|
| >COG0236 AcpP Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00058 Score=63.11 Aligned_cols=68 Identities=24% Similarity=0.406 Sum_probs=59.2
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchh-hcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLA-ELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVS 1088 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~-~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~ 1088 (1392)
..+.+.+++.|+.. ...+..+.+|. ++|+|||.+++|...|+++||+.+|..++ .-.|++++..++..
T Consensus 8 ~~i~~ii~e~l~~~-~~~i~~~~~~~~dlg~DSld~veLi~~lE~~f~i~i~~e~~~~~~tv~~l~~~i~~ 77 (80)
T COG0236 8 ERVKDIIAEQLGVD-EEEITTEASFVEDLGLDSLDLVELVMALEEEFGIEIPDEELENIKTVGDLVDYIEE 77 (80)
T ss_pred HHHHHHHHHHhCCc-hhhcCcccccccccCccHHHHHHHHHHHHHHHCCcCCHHHHHHHHhHHHHHHHHHH
Confidence 35778889999974 57788899997 59999999999999999999999999999 56789999887765
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1392 | ||||
| 2vz8_A | 2512 | Crystal Structure Of Mammalian Fatty Acid Synthase | 0.0 | ||
| 3slk_A | 795 | Structure Of Ketoreductase And Enoylreductase Didom | 6e-55 | ||
| 1pqw_A | 198 | Putative Enoyl Reductase Domain Of Polyketide Synth | 1e-30 | ||
| 2oby_A | 338 | Crystal Structure Of Human P53 Inducible Oxidoreduc | 8e-22 | ||
| 2j8z_A | 354 | Crystal Structure Of Human P53 Inducible Oxidoreduc | 9e-22 | ||
| 1yb5_A | 351 | Crystal Structure Of Human Zeta-crystallin With Bou | 8e-18 | ||
| 4dup_A | 353 | Crystal Structure Of A Quinone Oxidoreductase From | 6e-17 | ||
| 1wly_A | 333 | Crystal Structure Of 2-haloacrylate Reductase Lengt | 7e-16 | ||
| 4a27_A | 349 | Crystal Structure Of Human Synaptic Vesicle Membran | 2e-14 | ||
| 2cg5_B | 91 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 4e-13 | ||
| 2png_A | 89 | Type I Rat Fatty Acid Synthase Acyl Carrier Protein | 4e-12 | ||
| 2fr0_A | 486 | The First Ketoreductase Of The Erythromycin Synthas | 2e-11 | ||
| 3mjc_A | 496 | Structure Of A-Type Ketoreductases From Modular Pol | 4e-11 | ||
| 3mjv_A | 496 | Structure Of A-Type Ketoreductases From Modular Pol | 6e-11 | ||
| 4dif_A | 496 | Structure Of A1-type Ketoreductase Length = 496 | 6e-11 | ||
| 2eih_A | 343 | Crystal Structure Of Nad-Dependent Alcohol Dehydrog | 1e-10 | ||
| 3mjt_A | 496 | Structure Of A-Type Ketoreductases From Modular Pol | 1e-10 | ||
| 4eye_A | 342 | Crystal Structure Of A Probable Oxidoreductase From | 4e-10 | ||
| 2z5l_A | 511 | The First Ketoreductase Of The Tylosin Pks Length = | 1e-09 | ||
| 1xkt_A | 289 | Human Fatty Acid Synthase: Structure And Substrate | 3e-09 | ||
| 3tjm_A | 283 | Crystal Structure Of The Human Fatty Acid Synthase | 3e-09 | ||
| 2px6_A | 316 | Crystal Structure Of The Thioesterase Domain Of Hum | 4e-09 | ||
| 2wek_A | 341 | Crystal Structure Of The Human Mgc45594 Gene Produc | 9e-09 | ||
| 2c0c_A | 362 | Structure Of The Mgc45594 Gene Product Length = 362 | 1e-08 | ||
| 2x7h_A | 370 | Crystal Structure Of The Human Mgc45594 Gene Produc | 1e-08 | ||
| 4di7_A | 556 | Structure Of A2-type Ketoreductase Of Modular Polyk | 1e-08 | ||
| 2vn8_A | 375 | Crystal Structure Of Human Reticulon 4 Interacting | 3e-07 | ||
| 3uog_A | 363 | Crystal Structure Of Putative Alcohol Dehydrogenase | 1e-06 | ||
| 3krt_A | 456 | Crystal Structure Of Putative Crotonyl Coa Reductas | 1e-06 | ||
| 4a0s_A | 447 | Structure Of The 2-Octenoyl-Coa Carboxylase Reducta | 2e-06 | ||
| 3hhd_A | 965 | Structure Of The Human Fatty Acid Synthase Ks-Mat D | 3e-06 | ||
| 1rjw_A | 339 | Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd | 6e-06 | ||
| 3pii_A | 339 | Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog | 9e-06 | ||
| 2j3h_A | 345 | Crystal Structure Of Arabidopsis Thaliana Double Bo | 1e-05 | ||
| 1qor_A | 327 | Crystal Structure Of Escherichia Coli Quinone Oxido | 1e-05 | ||
| 3hzz_A | 467 | 2.4 Angstrom Crystal Structure Of Streptomyces Coll | 2e-05 | ||
| 3jyl_A | 325 | Crystal Structures Of Pseudomonas Syringae Pv. Toma | 5e-05 | ||
| 1iyz_A | 302 | Crystal Structures Of The Quinone Oxidoreductase Fr | 5e-05 | ||
| 3tqh_A | 321 | Structure Of The Quinone Oxidoreductase From Coxiel | 5e-05 | ||
| 3gaz_A | 343 | Crystal Structure Of An Alcohol Dehydrogenase Super | 7e-05 | ||
| 4hfj_A | 351 | X-ray Crystal Structure Of A Double Bond Reductase | 1e-04 | ||
| 4b7c_A | 336 | Crystal Structure Of Hypothetical Protein Pa1648 Fr | 2e-04 | ||
| 3qwa_A | 334 | Crystal Structure Of Saccharomyces Cerevisiae Zeta- | 2e-04 | ||
| 3cos_A | 381 | Crystal Structure Of Human Class Ii Alcohol Dehydro | 2e-04 | ||
| 1zsv_A | 349 | Crystal Structure Of Human Nadp-Dependent Leukotrie | 4e-04 | ||
| 2y05_A | 328 | Crystal Structure Of Human Leukotriene B4 12-Hydrox | 4e-04 | ||
| 2hcy_A | 347 | Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi | 8e-04 | ||
| 2cf2_D | 295 | Architecture Of Mammalian Fatty Acid Synthase Lengt | 8e-04 |
| >pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 | Back alignment and structure |
|
| >pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795 | Back alignment and structure |
|
| >pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase Length = 198 | Back alignment and structure |
|
| >pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338 | Back alignment and structure |
|
| >pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354 | Back alignment and structure |
|
| >pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351 | Back alignment and structure |
|
| >pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353 | Back alignment and structure |
|
| >pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333 | Back alignment and structure |
|
| >pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349 | Back alignment and structure |
|
| >pdb|2CG5|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase- Phosphopantetheinyl Transferase In Complex With Cytosolic Acyl Carrier Protein And Coenzyme A Length = 91 | Back alignment and structure |
|
| >pdb|2PNG|A Chain A, Type I Rat Fatty Acid Synthase Acyl Carrier Protein (Acp) Domain Length = 89 | Back alignment and structure |
|
| >pdb|2FR0|A Chain A, The First Ketoreductase Of The Erythromycin Synthase (Crystal Form 1) Length = 486 | Back alignment and structure |
|
| >pdb|3MJC|A Chain A, Structure Of A-Type Ketoreductases From Modular Polyketide Synthase Length = 496 | Back alignment and structure |
|
| >pdb|3MJV|A Chain A, Structure Of A-Type Ketoreductases From Modular Polyketide Synthase Length = 496 | Back alignment and structure |
|
| >pdb|4DIF|A Chain A, Structure Of A1-type Ketoreductase Length = 496 | Back alignment and structure |
|
| >pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343 | Back alignment and structure |
|
| >pdb|3MJT|A Chain A, Structure Of A-Type Ketoreductases From Modular Polyketide Synthase Length = 496 | Back alignment and structure |
|
| >pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From Mycobacterium Abscessus Solved By Iodide Ion Sad Length = 342 | Back alignment and structure |
|
| >pdb|2Z5L|A Chain A, The First Ketoreductase Of The Tylosin Pks Length = 511 | Back alignment and structure |
|
| >pdb|1XKT|A Chain A, Human Fatty Acid Synthase: Structure And Substrate Selectivity Of The Thioesterase Domain Length = 289 | Back alignment and structure |
|
| >pdb|3TJM|A Chain A, Crystal Structure Of The Human Fatty Acid Synthase Thioesterase Domain With An Activate Site-Specific Polyunsaturated Fatty Acyl Adduct Length = 283 | Back alignment and structure |
|
| >pdb|2PX6|A Chain A, Crystal Structure Of The Thioesterase Domain Of Human Fatty Acid Synthase Inhibited By Orlistat Length = 316 | Back alignment and structure |
|
| >pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341 | Back alignment and structure |
|
| >pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362 | Back alignment and structure |
|
| >pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370 | Back alignment and structure |
|
| >pdb|4DI7|A Chain A, Structure Of A2-type Ketoreductase Of Modular Polyketide Synthases Length = 556 | Back alignment and structure |
|
| >pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein 1 In Complex With Nadph Length = 375 | Back alignment and structure |
|
| >pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363 | Back alignment and structure |
|
| >pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456 | Back alignment and structure |
|
| >pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf In Complex With Nadp And 2-Octenoyl-Coa Length = 447 | Back alignment and structure |
|
| >pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965 | Back alignment and structure |
|
| >pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339 | Back alignment and structure |
|
| >pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339 | Back alignment and structure |
|
| >pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345 | Back alignment and structure |
|
| >pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327 | Back alignment and structure |
|
| >pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus Crotonyl Coa CarboxylaseREDUCTASE Length = 467 | Back alignment and structure |
|
| >pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325 | Back alignment and structure |
|
| >pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302 | Back alignment and structure |
|
| >pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321 | Back alignment and structure |
|
| >pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily Protein From Novosphingobium Aromaticivorans Length = 343 | Back alignment and structure |
|
| >pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351 | Back alignment and structure |
|
| >pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336 | Back alignment and structure |
|
| >pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334 | Back alignment and structure |
|
| >pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381 | Back alignment and structure |
|
| >pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349 | Back alignment and structure |
|
| >pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328 | Back alignment and structure |
|
| >pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347 | Back alignment and structure |
|
| >pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase Length = 295 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 939 bits (2429), Expect = 0.0
Identities = 455/1134 (40%), Positives = 645/1134 (56%), Gaps = 92/1134 (8%)
Query: 297 LKVKSPVKISPLVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNC 356
L + + SP+ + V F W+ L+ LA + + + L++ SG++G NC
Sbjct: 1403 LCRQQTPQDSPVFLSVEDTSFRWVDSLKDILADASS---RPVWLMAVGCSTSGVVGMVNC 1459
Query: 357 IRKETGGERTRCFEILDKN----APPFNPEDPFYKVQVEKDLAVNILRNGQWGTYRHSIL 412
+RKE GG R RC + + + AP +P + ++ DL +N+ R+G WG +RH L
Sbjct: 1460 LRKEPGGHRIRCVLVSNLSSTSPAPEMHPSSSELQKVLQGDLVMNVYRDGAWGAFRHFPL 1519
Query: 413 -QPIKRVMTDHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFR 471
Q T+HA++N L RGD+SS+ W P++ +YY+S+NFR
Sbjct: 1520 EQDRPEKQTEHAFVNVLSRGDLSSIRWVCSPLHYALPASCQDRLC-----SVYYTSLNFR 1574
Query: 472 DIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMA 531
D+ML T KL+P+ I + L + C++G E+SGR SG+RVMG+ LA
Sbjct: 1575 DVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA-SGRRVMGMVPAEGLATSVLLLQHAT 1633
Query: 532 WEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA 591
WE+P WTLE+AA+VP VY TA Y++ + G+MQ GES+LIH+GSGGVGQAAI +A
Sbjct: 1634 WEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC 1693
Query: 592 EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKL 651
+FTTVG+ EKR +++ FP + E NSRDTSFEQ V++ T G+GVDLVLNSLAEEKL
Sbjct: 1694 RVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKL 1753
Query: 652 QASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKA 711
QASVRCLAQ GRFLEIGKFDL+NN+ LGM VF++ +FHG++LD+ F + +
Sbjct: 1754 QASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSEL 1813
Query: 712 LQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQLL 771
L+ I G VQPL T+FP KVE AFRYMA GKHIGKV+I++R+EE L
Sbjct: 1814 LKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVREEEQGPAPRGLPPIAL 1873
Query: 772 -AVPRYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK 830
+ + + +KSY+I GGLGGFGL+LA WL LRGA+KLVLTSRSG++ GYQA +++ W+
Sbjct: 1874 TGLSKTFCPPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWR 1933
Query: 831 SYDVQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLG 890
VQVL+ST + ++ G +L+TEA +LGPV G+FNLA+VL+DA+ ENQTPE F
Sbjct: 1934 RQGVQVLVSTSNASSLDGARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSK 1993
Query: 891 PKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGL 950
PK + T D+ +R CP L FV+FSSVSCGRGNAGQ NYG ANS MERICE RR +GL
Sbjct: 1994 PKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANSAMERICEKRRHDGL 2053
Query: 951 PGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVA 1010
PGLAV+WGA+G+VG+V + N + VIGGTL QRI++CLE L+ FL Q P+++S V+A
Sbjct: 2054 PGLAVQWGAIGDVGVVLETMGTN-DTVIGGTLPQRIASCLEVLDLFLSQPHPVLSSFVLA 2112
Query: 1011 EKKAGS----GGATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFE 1066
EKKA + ++V AV +ILG+RD+ +++ STL +LG+DS+M VE++Q LERE +
Sbjct: 2113 EKKAAAPRDGSSQKDLVKAVAHILGIRDVASINPDSTLVDLGLDSLMGVEVRQILEREHD 2172
Query: 1067 VFLTPQDIRGLTFAKLQDIAVSFENDDKSKPVSTEASGGQVTALSVEDIPDVGIQYLMRT 1126
+ L+ +++R L+ KLQ+++ T T S ED P L +
Sbjct: 2173 LVLSMREVRQLSLRKLQELS-----------SKTSTDADPATPTSHEDSPVRQQATLNLS 2221
Query: 1127 IGDEILANKPVIRLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIATVLEPLAKNINAQVLV 1186
+ RL S+ + E P+ F+V IEG TV LA ++
Sbjct: 2222 TLLVNPEGPTLTRLNSV----QSAERPL------FLVHPIEGSITVFHGLAAKLSIPTYG 2271
Query: 1187 FQFDHTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLG--- 1243
Q P D+I +A + ++ V ++ G+S+G VA E+ +L+
Sbjct: 2272 LQCTGAAPLDSIQSLASYYIECIRQ--VQPEGPYRIAGYSYGACVAFEMCSQLQAQQSAT 2329
Query: 1244 -TKCHLYLVDSAPDYV---------------------------------------LTSLR 1263
L+L D + +V L +L
Sbjct: 2330 PGNHSLFLFDGSHTFVLAYTQSVRAKMTPGCEAEAEAKAMYFFVQQFTDMEQGKVLEALI 2389
Query: 1264 KLPDWNAKLNYFLDLMPEDAT-HSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLL 1322
L A++ +DL+ + R A + Y+++ + Y P+ + GN+TLL
Sbjct: 2390 PLQGLEARVAATVDLITQSHAGLDRHALSFAARSFYQKLRAAENY-WPQAT-YHGNVTLL 2447
Query: 1323 RPTEQALPTA---EDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDST 1373
R DY LS+VC V VH ++G+H T+L+ I+ S
Sbjct: 2448 RAKTGGAYGEDLGADYNLSQVCDGKVSVHVIEGDHRTLLEGSGLESILSIIHSC 2501
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 182 bits (462), Expect = 3e-46
Identities = 71/233 (30%), Positives = 120/233 (51%), Gaps = 3/233 (1%)
Query: 65 MAWETVSLMRGELYTEVPVVFENIKFMRATNVPKEGSVEFIVMVQKGSGNFEIVEG-GAA 123
+ W+T++ + E PVVFE++ +AT +PK G+V V + + S FE+ + G+
Sbjct: 894 LTWKTLARALSQNLEETPVVFEDVTLHQATILPKTGTVSLEVRLLEASHAFEVSDSNGSL 953
Query: 124 IVTGKVYIPADVKTEMVRIPDQYKIPRTEGEAIELQSRDIYKELRLRGYHYKGLFRSLNV 183
I +GKVY ++ + L D+YK+LRLRGY Y F+ +
Sbjct: 954 IASGKVYQWESPDPKLFDTRAAVDPADSTA-EFRLSQGDVYKDLRLRGYDYGPFFQLVLE 1012
Query: 184 ADGAGTQGKIRWHNNWVAFMDNMLQLQILQYDTRGLFVPTSIQKLVINVSDHVNLLSTLD 243
+D G +G+++W+++WV+F+D ML + IL GL++PT + I+ H L TL
Sbjct: 1013 SDLEGNRGRLQWNDSWVSFLDAMLHMSILAPGQLGLYLPTRFTSIRIDPVTHRQKLYTLQ 1072
Query: 244 EETPEYPVFVYKEVEVIKSGGVEIRGLKASAIPRKKPLG-EPVLEKYKFIQNE 295
+ T V V + + + +GG G +S PR+ +P+LEK+ F +
Sbjct: 1073 DTTQAADVVVDRNLNTVVAGGALFLGAHSSVAPRRPQEHLKPILEKFCFTPHV 1125
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795 | Back alignment and structure |
|---|
Score = 582 bits (1501), Expect = 0.0
Identities = 165/713 (23%), Positives = 286/713 (40%), Gaps = 72/713 (10%)
Query: 348 SGIIGFFNCIRKETGGERTRCFEILDKNAPPFNPEDPFYKVQVEKDLAVNILRNGQWGTY 407
+ + G + E R ++ + + + LR G
Sbjct: 139 AALWGLLRSTQTEHPD-RFVLVDVPEPAQLLPALPGVLACGEPQ-----LALRRGGAHAP 192
Query: 408 RH---SILQPIKRVMTDHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIY 464
R + + A G + L P +
Sbjct: 193 RLAGLGSDDVLPVPDGTGWRLEATRPGSLDGLALVDEPTATAPLGD------GEVRIAMR 246
Query: 465 YSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDSGK---------RVMGLT 515
+ +NFRD ++ +G E +G + ++G RVMG+
Sbjct: 247 AAGVNFRDALIALGMYPGVAS----------LGSEGAGVVVETGPGVTGLAPGDRVMGMI 296
Query: 516 SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGS 575
+ D M IP W+ AA+VP V+ TA YA+ ++ GES+L+H+ +
Sbjct: 297 PK-AFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAA 355
Query: 576 GGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTK 635
GGVG AAI LAR++ AE++ T + + + E++ +SR FEQ + T
Sbjct: 356 GGVGMAAIQLARHLGAEVYATASEDKWQAV------ELSREHLASSRTCDFEQQFLGATG 409
Query: 636 GRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLD 695
GRGVD+VLNSLA E AS+R L +GGRFLE+GK D+ + + + S+ D
Sbjct: 410 GRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKTDVRDP--VEVADAHPGVSYQAF--D 465
Query: 696 NFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIR 755
Q L + ++ + ++PL T + + EA R+++ +H+GK+++ +
Sbjct: 466 TVEAGPQRIGEMLHELVE-LFEGRVLEPLPVTAWDVRQAPEALRHLSQARHVGKLVLTMP 524
Query: 756 DEEPTKICTPKVKQLLAVPRYYADSNKSYIICGGLGGFGLELADWLVL-RGARKLVLTSR 814
D+ + ++ GG G G E+A LV+ RG R LVL SR
Sbjct: 525 PVW--------------------DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSR 564
Query: 815 SGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKD 874
G A + +Y +V + D+ + +L P+ + + A VL D
Sbjct: 565 RGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEHPLTAVVHAAGVLDD 624
Query: 875 ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934
+ E+ T E + L PK + + + V+FSSVS G+ GQ NY A
Sbjct: 625 GVSESLTVERLDQVLRPKVDGARNLLEL----IDPDVALVLFSSVSGVLGSGGQGNYAAA 680
Query: 935 NSIMERICEARRAEGLPGLAVEWGAVGEVGLVADMAE-DNLEVVIGGTLQQRISNCLECL 993
NS ++ + + R++ GLP ++ WG E G+ + + E + + G L L
Sbjct: 681 NSFLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPISTEEGLSQF 740
Query: 994 NEFLIQSEPIVASMVVAEKKAGSGGATNIVDAVINILGLRDLKTVSLHSTLAE 1046
+ + +VA + + G+ +++ ++ + T +L +
Sbjct: 741 DAACGGAHTVVAPVRFSRLSDGNAIKFSVLQGLVGPHRVNKAATADDAESLRK 793
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198 | Back alignment and structure |
|---|
Score = 286 bits (733), Expect = 5e-89
Identities = 71/201 (35%), Positives = 113/201 (56%), Gaps = 4/201 (1%)
Query: 529 EMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARY 588
++ IPD +AAT Y TA +++ G++ GE +LIH+ +GGVG AA+++A+
Sbjct: 2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKM 61
Query: 589 MDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE 648
+ A I+TT G+ KRE + + + E +G+SR F +++ T G GVD+VLNSLA
Sbjct: 62 IGARIYTTAGSDAKREMLSR----LGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAG 117
Query: 649 EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSL 708
E +Q V+ LA GGRF+E+GK D+ + LG+ + SF V LD + L
Sbjct: 118 EAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARYRQL 177
Query: 709 QKALQKAIDAGAVQPLVRTIF 729
+ + + + G ++ L T F
Sbjct: 178 LQHILQHVADGKLEVLPVTAF 198
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 190 bits (485), Expect = 2e-53
Identities = 70/334 (20%), Positives = 135/334 (40%), Gaps = 53/334 (15%)
Query: 462 QIYYSSINFRDIMLTTAKLAPEVIESRR-LYQH-----CVIGFEYSGRLRDSGK------ 509
++ +NF D+M+ R+ + V GFE SG + G
Sbjct: 36 RVKACGLNFIDLMV------------RQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYE 83
Query: 510 ---RVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKG 566
RVM + + A T VE ++IPD + +AA P + TA +F +++G
Sbjct: 84 IGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREG 143
Query: 567 ESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSF 626
S+L+H+ GGVGQA L + + K E I+ + + R+ +
Sbjct: 144 MSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSVTHL------FDRNADY 197
Query: 627 EQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLG------- 679
Q V + + GVD+VL+ L + + L G ++ G ++
Sbjct: 198 VQEVKRIS-AEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKS 256
Query: 680 ---------MEVFMRETSFHGVMLDNFFFAEQ--EWKMSLQKALQKAIDAGAVQPLVRTI 728
++++ G L N F + + + L + ++P+V ++
Sbjct: 257 WWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSL 316
Query: 729 FPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKI 762
+ ++V+EA + + +IGK+I+ + ++ PT +
Sbjct: 317 WALEEVKEAMQRIHDRGNIGKLILDV-EKTPTPL 349
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354 | Back alignment and structure |
|---|
Score = 187 bits (477), Expect = 2e-52
Identities = 81/317 (25%), Positives = 139/317 (43%), Gaps = 43/317 (13%)
Query: 462 QIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDSGK----------RV 511
++ S++N D+M + P S ++G E SG + + G
Sbjct: 55 KVAASALNRADLMQRQGQYDPPPGASN------ILGLEASGHVAELGPGCQGHWKIGDTA 108
Query: 512 MGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILI 571
M L G A + IP+ TL AA +P + TA + + G +Q G+ +LI
Sbjct: 109 MALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLI 168
Query: 572 HAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIG-----NSRDTSF 626
HAG GVG AAI L R A T G+ +K + K +G N + F
Sbjct: 169 HAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK---------LGAAAGFNYKKEDF 219
Query: 627 EQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIG--KFDLANNNMLGMEVFM 684
+ +K TKG GV+L+L+ + + +V CLA GR++ G N + ++
Sbjct: 220 SEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDINGPLFS-KLLF 278
Query: 685 RETSFHGVMLDNFFFAEQEWKMSLQKALQK-------AIDAGAVQPLVRTIFPEDKVEEA 737
+ S +L + + ++K L A + + P++ I+P +++EA
Sbjct: 279 KRGSLITSLLRS---RDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEA 335
Query: 738 FRYMAAGKHIGKVIIKI 754
+YM A K+IGK+++++
Sbjct: 336 HKYMEANKNIGKIVLEL 352
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353 | Back alignment and structure |
|---|
Score = 186 bits (475), Expect = 4e-52
Identities = 71/286 (24%), Positives = 122/286 (42%), Gaps = 46/286 (16%)
Query: 495 VIGFEYSGRLRDSGK---------RVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAAT 545
++G E SG + G +V GL +G + A C P + AA
Sbjct: 88 ILGLELSGEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAA 147
Query: 546 VPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREF 605
+P + T +F + +GES+LIH G+ G+G AI LAR AE++ T G+ K E
Sbjct: 148 LPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEA 207
Query: 606 IRKTFPFIKEENIG-----NSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQ 660
+ +G N R F V+K G+GVD++L+ + + ++ LA+
Sbjct: 208 CER---------LGAKRGINYRSEDFAA-VIKAETGQGVDIILDMIGAAYFERNIASLAK 257
Query: 661 GGRFLEIG--------KFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKAL 712
G I K +L + ++ + G + E K +++ L
Sbjct: 258 DGCLSIIAFLGGAVAEKVNL-------SPIMVKRLTVTGSTMRPRTAEE---KRAIRDDL 307
Query: 713 QK----AIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754
++AG V P++ +F + V +A R + G H+GKV++ +
Sbjct: 308 LSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV 353
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343 | Back alignment and structure |
|---|
Score = 184 bits (469), Expect = 2e-51
Identities = 50/261 (19%), Positives = 97/261 (37%), Gaps = 37/261 (14%)
Query: 506 DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQK 565
+++G + A P + E+AA +P + TA + ++
Sbjct: 107 CPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRP 166
Query: 566 GESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIG-----N 620
G+ +L+ A GV AAI +A+ A + T G+ +K + +G N
Sbjct: 167 GDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA---------LGADETVN 217
Query: 621 SRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIG-------KFDLA 673
+ + V + T G+G D V++ + ++ A GGR G
Sbjct: 218 YTHPDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPF- 276
Query: 674 NNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDK 733
VF R+ S G + S + + ++ G ++P+V + P +
Sbjct: 277 ------AHVFYRQLSILGSTM---------ASKSRLFPILRFVEEGKLKPVVGQVLPLEA 321
Query: 734 VEEAFRYMAAGKHIGKVIIKI 754
E R + + GKV++++
Sbjct: 322 AAEGHRLLEERRVFGKVVLQV 342
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342 | Back alignment and structure |
|---|
Score = 177 bits (450), Expect = 6e-49
Identities = 73/317 (23%), Positives = 125/317 (39%), Gaps = 54/317 (17%)
Query: 462 QIYYSSINFRDIMLTTAKLAPEVIESRRLYQHC-----VIGFEYSGRLRDSGK------- 509
+ + + F D ++T + YQ V G E +G +R + +
Sbjct: 54 DVKAAGVCFPDYLMT-----------KGEYQLKMEPPFVPGIETAGVVRSAPEGSGIKPG 102
Query: 510 -RVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGES 568
RVM A P Q +A + Y T +A GQ++ GE+
Sbjct: 103 DRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGET 162
Query: 569 ILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIG-----NSRD 623
+L+ +GG+G AAI +A+ M A++ V EF++ +G +
Sbjct: 163 VLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS---------VGADIVLPLEE 213
Query: 624 TSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIG-------KFDLANNN 676
+ + V + T G GVD+V++ + +VR LA GR L +G + N
Sbjct: 214 -GWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAAGGIPTIKV--NR 270
Query: 677 MLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEE 736
+L +R S GV F ++ Q L+K + G ++P V P + +
Sbjct: 271 LL-----LRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPPVSARIPLSEGRQ 324
Query: 737 AFRYMAAGKHIGKVIIK 753
A + A GK GK+++
Sbjct: 325 ALQDFADGKVYGKMVLV 341
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 176 bits (448), Expect = 2e-48
Identities = 64/259 (24%), Positives = 115/259 (44%), Gaps = 31/259 (11%)
Query: 508 GKRVM-GLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKG 566
G RV T A +++P++ + A + Y TA A+ ++ G
Sbjct: 112 GDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAG 171
Query: 567 ESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIG-----NS 621
ES+L+H SGGVG AA +AR +I T GT E ++ + + G N
Sbjct: 172 ESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ---------NGAHEVFNH 222
Query: 622 RDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIG-----KFDLANNN 676
R+ ++ + K +G+D+++ LA L + L+ GGR + +G + + +
Sbjct: 223 REVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGTIEINPRD-- 280
Query: 677 MLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEE 736
+E+S GV L F + +E ALQ ++ G ++P++ + +P +KV E
Sbjct: 281 -----TMAKESSIIGVTL---FSSTKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAE 332
Query: 737 AFR-YMAAGKHIGKVIIKI 754
A + GK+I+ +
Sbjct: 333 AHENIIHGSGATGKMILLL 351
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349 | Back alignment and structure |
|---|
Score = 172 bits (437), Expect = 4e-47
Identities = 58/320 (18%), Positives = 100/320 (31%), Gaps = 56/320 (17%)
Query: 463 IYYSSINFRDIMLTTAKLAPEVIESRR-LYQH-----CVIGFEYSGRLRDS--------- 507
+ +SIN D+ + Y GFE G +
Sbjct: 56 VNLASINPSDVAF------------IKGQYGQPRVKGRPAGFEGVGTIVAGGDEPYAKSL 103
Query: 508 -GKRV---MGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQM 563
GKRV GL++ S A + + D ED A + TA AMF +
Sbjct: 104 VGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTA-IAMFDIVKQ 162
Query: 564 QKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIG---- 619
+ ++ ++ AG+ + + I LA+ TV E+ ++ IG
Sbjct: 163 EGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD---------IGAAHV 213
Query: 620 -NSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIG-----KFDLA 673
N + FE + + K + L+++ A + + R++ G +
Sbjct: 214 LNEKAPDFEATLREVMKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLDPDATVIR 273
Query: 674 NNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDK 733
L + G L + +E + QK G V + P +
Sbjct: 274 EPGQL----IFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVTAVVPLAE 329
Query: 734 VEEAFRYMAAGKHIGKVIIK 753
K GKV I+
Sbjct: 330 AIAW-VPAELTKPNGKVFIR 348
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 3e-46
Identities = 66/305 (21%), Positives = 113/305 (37%), Gaps = 45/305 (14%)
Query: 462 QIYYSSINFRDIMLTTAKLAPEVIESRRLYQH-----CVIGFEYSGRLRDSGKRVMGLTS 516
++ +NF D ++ Y + G E G + G+R L
Sbjct: 31 RVEAVGLNFADHLMR-----------LGAYLTRLHPPFIPGMEVVGVVE--GRRYAALVP 77
Query: 517 GRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSG 576
LA +P+ + E+AA P + T Y Q + GE +L+ A +G
Sbjct: 78 QGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLT-AYLALKRAQARPGEKVLVQAAAG 136
Query: 577 GVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKG 636
+G AA+ +AR M + PEK +G ++ ++ +
Sbjct: 137 ALGTAAVQVARAMGLRVLAAASRPEKLALPLA---------LGAEEAATYAEVPERAKAW 187
Query: 637 RGVDLVLNSLAEEKLQASVRCLAQGGRFLEIG-------KFDLANNNMLGMEVFMRETSF 689
G+DLVL +E ++ S+ LA GGR + IG + + R +
Sbjct: 188 GGLDLVLEVRGKE-VEESLGLLAHGGRLVYIGAAEGEVAPIPP-------LRLMRRNLAV 239
Query: 690 HGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGK 749
G L E L + ++P+V +FP + E AFR + H GK
Sbjct: 240 LGFWLT-PLLREGALVEEALGFLLPRL-GRELRPVVGPVFPFAEAEAAFRALLDRGHTGK 297
Query: 750 VIIKI 754
V++++
Sbjct: 298 VVVRL 302
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 5e-44
Identities = 59/325 (18%), Positives = 115/325 (35%), Gaps = 54/325 (16%)
Query: 462 QIYYSSINFRDIMLTTAKLAP--------------EVIE-----SR---------RLYQH 493
+ S+N+RD ++ + V +R
Sbjct: 59 RTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPG 118
Query: 494 CVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATA 553
+ G G R +G L+ P +A+T+PC TA
Sbjct: 119 WLDG-LRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTA 177
Query: 554 VYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFI 613
+A+ G ++ G+ +++ G+GGV + +A+ AE+ T + EK +
Sbjct: 178 WFALVEKGHLRAGDRVVVQ-GTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA----- 231
Query: 614 KEENIG-----NSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIG 668
+G N + + + V T RG D +L L S++ +A GR IG
Sbjct: 232 ----LGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIG 287
Query: 669 KFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTI 728
+ + + ++ G+ + + + L A+D ++P++
Sbjct: 288 VLEGFEVSGPVGPLLLKSPVVQGISVGHR---------RALEDLVGAVDRLGLKPVIDMR 338
Query: 729 FPEDKVEEAFRYMAAGKHIGKVIIK 753
+ +V EA ++ G GKV+I+
Sbjct: 339 YKFTEVPEALAHLDRG-PFGKVVIE 362
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 7e-44
Identities = 52/316 (16%), Positives = 101/316 (31%), Gaps = 41/316 (12%)
Query: 462 QIYYSSINFRDIMLTTAKLAPEVIESRRLYQH-----CVIGFEYSGRLRDSGK------- 509
++ + IN DI + + Y V G E ++ G
Sbjct: 60 KMLAAPINPSDINMI-----------QGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKP 108
Query: 510 --RVMGLTSGR-SLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKG 566
V+ +G + E ++P L+ AAT+ TA + Q+Q G
Sbjct: 109 GDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPG 168
Query: 567 ESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSF 626
+S++ +A + GVGQA I +A + V + + + E++ +
Sbjct: 169 DSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRR 228
Query: 627 EQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIG-------KFDLANNNMLG 679
++ L LN + + +R LA+GG + G + + ++
Sbjct: 229 PEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVASV--SLLI- 285
Query: 680 MEVFMRETSFHGVMLDNFFFAEQ-EWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAF 738
++ G L + + L L I G + + P + A
Sbjct: 286 ----FKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSAL 341
Query: 739 RYMAAGKHIGKVIIKI 754
K I+ +
Sbjct: 342 EASMKPFISSKQILTM 357
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 1e-43
Identities = 53/248 (21%), Positives = 90/248 (36%), Gaps = 38/248 (15%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMF--ICGQMQKGESILIHAGSGGVGQAAINLARYMDA 591
PD + E+AA V +TA + M++G+++LI SGG+G A A A
Sbjct: 195 KPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA 254
Query: 592 EIFTTVGTPEKREFIRK------------TFPFIKEENIGNSRDTS-FEQLVMKRTKGRG 638
V +P+K E R + F K+EN + ++ F + + + T G
Sbjct: 255 NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGED 314
Query: 639 VDLVLNSLAEEKLQASVRCLAQGGRFLEIG-------KFDLANNNMLGMEVFMRETSFHG 691
+D+V E ASV +GG ++D ++M G
Sbjct: 315 IDIVFEHPGRETFGASVFVTRKGGTITTCASTSGYMHEYDN-------RYLWMSLKRIIG 367
Query: 692 VMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVI 751
N + E + I G + P + ++ + +A + H GKV
Sbjct: 368 SHFAN--YREAW-------EANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVG 418
Query: 752 IKIRDEEP 759
+ E
Sbjct: 419 VLCLAPEE 426
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 3e-43
Identities = 50/318 (15%), Positives = 104/318 (32%), Gaps = 53/318 (16%)
Query: 466 SSINFRDIMLTTAKLAPEVIESRR-LYQH-----CVIGFEYSGRLRDSGK---------R 510
IN D++ Y H + G+E G + + G R
Sbjct: 42 RPINPSDLIP------------ITGAYAHRIPLPNIPGYEGVGIVENVGAFVSRELIGKR 89
Query: 511 VMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESIL 570
V+ L + +T + IPD AA + TA +Q+ + +L
Sbjct: 90 VLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLL 149
Query: 571 IHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIG-----NSRDTS 625
++A +G L++ ++ + + E + + +G ++
Sbjct: 150 VNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR---------LGAAYVIDTSTAP 200
Query: 626 FEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIG-----KFDLANNNMLGM 680
+ VM+ T G G D ++S+ L G FL IG + + A
Sbjct: 201 LYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLSGIQVNWAEIVTKAK 260
Query: 681 EVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPL-VRTIFPEDKVEEAFR 739
FH ++ + + L + ++ ++ + V + + V+ A
Sbjct: 261 VHA---NIFHLRHWNDEVSPYK--WQETFRHLIRLVENEQLRFMKVHSTYELADVKAAVD 315
Query: 740 YMAAGKHI-GKVIIKIRD 756
+ + + GKV + +
Sbjct: 316 VVQSAEKTKGKVFLTSYE 333
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 3e-41
Identities = 59/299 (19%), Positives = 94/299 (31%), Gaps = 38/299 (12%)
Query: 483 EVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLED 542
VI G L + T+ LA P T E+
Sbjct: 136 HVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEE 195
Query: 543 AATVPCVYATAVYAMFI--CGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTP 600
AA P TA + QM++G+ +LI SGG+G AI + V +
Sbjct: 196 AAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSA 255
Query: 601 EKREFIR----------KTFPF---IKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLA 647
+K +R I ++ ++ GR D+V
Sbjct: 256 QKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTG 315
Query: 648 EEKLQASVRCLAQGGRFLEIG-------KFDLANNNMLGMEVFMRETSFHGVMLDNFFFA 700
SV +GG + G FD ++M+ G A
Sbjct: 316 RVTFGLSVIVARRGGTVVTCGSSSGYLHTFDN-------RYLWMKLKKIVGS-----HGA 363
Query: 701 EQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEP 759
E Q+A + ++GAV P + ++P + EA R + + +GKV + E
Sbjct: 364 NHE----EQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVLCMAPEQ 418
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 3e-39
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Query: 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLI 838
+ ++ GG GG G ++A WL RGA L+L SRSG + ++ + +
Sbjct: 224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTV 283
Query: 839 STDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
+ D+T V LL P+ +F+ A L D + T E + K +
Sbjct: 284 AACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARN 343
Query: 899 FDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWG 958
+ +R + L FV+FSS + G G Y N+ ++ + + RR++GLP AV WG
Sbjct: 344 LHELTREL--DLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWG 401
Query: 959 AVGEVGLVADMAEDNLE 975
G+ D
Sbjct: 402 TWAGSGMAEGPVADRFR 418
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} Length = 511 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 8e-39
Identities = 63/197 (31%), Positives = 99/197 (50%), Gaps = 5/197 (2%)
Query: 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLI 838
+ + +I GG+G G LA L GA +LVLTSR G + A + + + +V+
Sbjct: 257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVH 316
Query: 839 STDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
+ D+ + L+T P + +F+ A +L DA+ + +PE F G K +
Sbjct: 317 AACDVAERDALAALVTAY----PPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAEL 372
Query: 899 FDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWG 958
+ + + L FV+FSSV+ GNAGQ Y AN+ ++ + E RRA GLP +V WG
Sbjct: 373 LHQLTADI-KGLDAFVLFSSVTGTWGNAGQGAYAAANAALDALAERRRAAGLPATSVAWG 431
Query: 959 AVGEVGLVADMAEDNLE 975
G G+ A E++L
Sbjct: 432 LWGGGGMAAGAGEESLS 448
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 1e-38
Identities = 67/322 (20%), Positives = 117/322 (36%), Gaps = 55/322 (17%)
Query: 465 YSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGR---LRDS-------GKRVMGL 514
+ +N DI + + P V IGFE G L S G+ V +
Sbjct: 62 FVGVNASDINYSAGRYDPSVKPP------FDIGFEGIGEVVALGLSASARYTVGQAVAYM 115
Query: 515 TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAG 574
G S A +A +P + T+ TA ++ G + +G+ +L+ A
Sbjct: 116 APG-SFAEYTVVPASIATPVPS--VKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAA 172
Query: 575 SGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIG-----NSRDTSFEQL 629
+GG GQ A+ L++ + T + EK F++ +G N +
Sbjct: 173 AGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS---------LGCDRPINYKTEPVGT- 222
Query: 630 VMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIG---------KFDLANNNMLGM 680
V+K+ GVD+V S+ +V LA GR + IG L
Sbjct: 223 VLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPA 282
Query: 681 EVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLV--------RTIFPED 732
++ + S G L+++ Q L + +G + V +
Sbjct: 283 KLLKKSASVQGFFLNHYLSKYQA----AMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLE 338
Query: 733 KVEEAFRYMAAGKHIGKVIIKI 754
+ A YM GK+ GK+++++
Sbjct: 339 SIFRAVNYMYMGKNTGKIVVEL 360
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} Length = 525 | Back alignment and structure |
|---|
Score = 148 bits (375), Expect = 1e-37
Identities = 37/207 (17%), Positives = 64/207 (30%), Gaps = 14/207 (6%)
Query: 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKI-----------WKS 831
+ ++ G E A L GA L+L + G +
Sbjct: 253 TVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELAD 312
Query: 832 YDVQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGP 891
+ T D+T LL + P+ + +L + + +
Sbjct: 313 LGATATVVTCDLTDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTA 372
Query: 892 KANATKYFDKYSRTM---CPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAE 948
KA A + D+ R V+FSSV+ G AGQ Y + ++ + RA+
Sbjct: 373 KATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAGQGAYAAGTAFLDALAGQHRAD 432
Query: 949 GLPGLAVEWGAVGEVGLVADMAEDNLE 975
G +V W + + L
Sbjct: 433 GPTVTSVAWSPWEGSRVTEGATGERLR 459
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 1e-37
Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 33/268 (12%)
Query: 508 GKRVMGLTSGR-----SLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQ 562
G V GLT G + A D + P T+ A+ +P V+ TA + Q
Sbjct: 88 GDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQ 147
Query: 563 MQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIG--- 619
+Q G+++LI G GGVG AI +A A +F T E++R +G
Sbjct: 148 VQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARG-SDLEYVRD---------LGATP 197
Query: 620 --NSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNM 677
SR+ + T G+G DLV ++L L AS + + G + + +
Sbjct: 198 IDASREPEDY--AAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCL--GWGTHKL 253
Query: 678 LGMEVFMRETSFHGVMLDNFFFAEQEWKMS--LQKALQKAIDAGAVQPLVRT-IFPEDKV 734
+ ++ ++ GV + A + + + + G + P + F ++
Sbjct: 254 --APLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPRLDPRTFSIAEI 311
Query: 735 EEAFRYMA----AGKHIGKVIIKIRDEE 758
A+ + + GK+ I +
Sbjct: 312 GSAYDAVLGRNDVPRQRGKIAITVEGHH 339
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496 | Back alignment and structure |
|---|
Score = 147 bits (372), Expect = 3e-37
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 5/190 (2%)
Query: 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKN-GYQALRIKIWKSYDVQVLISTD 841
S ++ GG GG G +A L +GA LVLTSR G G LR ++ + V+V I+
Sbjct: 241 SVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAEL-EQLGVRVTIAAC 299
Query: 842 DITTEAGVVNLLTEANKLGPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFD 900
D + LL E + P+ +F+ A V D A + T +A + K A ++
Sbjct: 300 DAADREALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLH 359
Query: 901 KYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGAV 960
+ + + L FV+FSS + G+ GQ Y AN+ ++ + E RR+ GL +V WG
Sbjct: 360 ELTADL--DLDAFVLFSSGAAVWGSGGQPGYAAANAYLDALAEHRRSLGLTASSVAWGTW 417
Query: 961 GEVGLVADMA 970
GEVG+ D
Sbjct: 418 GEVGMATDPE 427
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 1e-34
Identities = 47/257 (18%), Positives = 91/257 (35%), Gaps = 36/257 (14%)
Query: 508 GKRVMGLT----SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQM 563
G +VMG+ A + + ++ + AA++P TA ++
Sbjct: 92 GDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTA-LQALNQAEV 150
Query: 564 QKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIG---- 619
++G+ +LIHAG+GGVG AI LA+ + TT F++ +G
Sbjct: 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS-KRNHAFLKA---------LGAEQC 200
Query: 620 -NSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNML 678
N + F + VD V++ + + S+ CL + G + + +
Sbjct: 201 INYHEEDFLLAI-----STPVDAVIDLVGGDVGIQSIDCLKETGCIVSVP--------TI 247
Query: 679 GMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAF 738
+ ++ L K + ++ + IF + A
Sbjct: 248 TAGRVIEVAKQKHRRAFGLLKQFNIEEL---HYLGKLVSEDKLRIEISRIFQLSEAVTAH 304
Query: 739 RYMAAGKHIGKVIIKIR 755
+ G GK++ K+R
Sbjct: 305 ELLETGHVRGKLVFKVR 321
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 1e-34
Identities = 47/334 (14%), Positives = 87/334 (26%), Gaps = 51/334 (15%)
Query: 462 QIYYSSINFRDIMLTTAK--LAPEVIESRRLYQHCVI-GFEYSGRLRDSGK--------- 509
+ S +N DI P + G E + G
Sbjct: 39 KTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGD 98
Query: 510 RVMGLTSG------------RSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAM 557
V+ A P+ T+ AT+ TA +
Sbjct: 99 WVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLML 158
Query: 558 FICGQMQKGESILI-HAGSGGVGQAAINLARYMDAEIFTTVGTP----EKREFIRK---T 609
++ G+ I + G+ VG+ A + + ++ + + E +++ T
Sbjct: 159 THYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT 218
Query: 610 FPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIG- 668
+++N NSR+ + G L LN + + R L G L G
Sbjct: 219 QVITEDQN--NSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGG 276
Query: 669 ------KFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQ 722
+ + G + +E K S + + G +
Sbjct: 277 MSFQPVTIPT-------SLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLT 329
Query: 723 PLVRTIFPEDKVEEAFRYMA---AGKHIGKVIIK 753
D + A GK +I
Sbjct: 330 DAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT 363
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} Length = 316 | Back alignment and structure |
|---|
Score = 134 bits (338), Expect = 1e-34
Identities = 60/253 (23%), Positives = 98/253 (38%), Gaps = 51/253 (20%)
Query: 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTNPPDTIPEMADSLLPHFKKRLV 1214
+ +F+V IEG TV LA ++ Q P D+I +A + ++
Sbjct: 44 SSERPLFLVHPIEGSTTVFHSLASRLSIPTYGLQCTRAAPLDSIHSLAAYYIDCIRQVQP 103
Query: 1215 HGTDEIKLVGFSFGGMVALELAIKLEQLG----TKCHLYLVDSAPDYV------------ 1258
G ++ G+S+G VA E+ +L+ T L+L D +P YV
Sbjct: 104 EG--PYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPTYVLAYTQSYRAKLT 161
Query: 1259 ---------------------------LTSLRKLPDWNAKLNYFLDLMPEDATH-SRTYQ 1290
L +L L ++ +DL+ + R
Sbjct: 162 PGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLKGLEERVAAAVDLIIKSHQGLDRQEL 221
Query: 1291 RNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTE---QALPTAEDYGLSKVCKKPVKV 1347
A + Y ++ + +YT PK K + GN+ LLR DY LS+VC V V
Sbjct: 222 SFAARSFYYKLRAAEQYT-PKAK-YHGNVMLLRAKTGGAYGEDLGADYNLSQVCDGKVSV 279
Query: 1348 HFVDGNHFTVLDN 1360
H ++G+H T+L+
Sbjct: 280 HVIEGDHRTLLEG 292
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A Length = 283 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 2e-33
Identities = 60/253 (23%), Positives = 98/253 (38%), Gaps = 51/253 (20%)
Query: 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTNPPDTIPEMADSLLPHFKKRLV 1214
+ +F+V IEG TV LA ++ Q P D+I +A + ++
Sbjct: 22 SSERPLFLVHPIEGSTTVFHSLASRLSIPTYGLQCTRAAPLDSIHSLAAYYIDCIRQVQP 81
Query: 1215 HGTDEIKLVGFSFGGMVALELAIKLEQLG----TKCHLYLVDSAPDYV------------ 1258
G ++ G+S+G VA E+ +L+ T L+L D +P YV
Sbjct: 82 EG--PYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPTYVLAYTGSYRAKLT 139
Query: 1259 ---------------------------LTSLRKLPDWNAKLNYFLDLMPEDATH-SRTYQ 1290
L +L L ++ +DL+ + R
Sbjct: 140 PGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLKGLEERVAAAVDLIIKSHQGLDRQEL 199
Query: 1291 RNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQ---ALPTAEDYGLSKVCKKPVKV 1347
A + Y ++ + +YT PK K + GN+ LLR DY LS+VC V V
Sbjct: 200 SFAARSFYYKLRAAEQYT-PKAK-YHGNVMLLRAKTGGAYGEAAGADYNLSQVCDGKVSV 257
Query: 1348 HFVDGNHFTVLDN 1360
H ++G+H T+L+
Sbjct: 258 HVIEGDHATLLEG 270
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 9e-33
Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 41/284 (14%)
Query: 495 VIGFEYSGRLRDSGKRVMGLTSGRSLANC-------CET---DVEMAWEIPDQWTLEDA- 543
V+GFE + + + G V T G + C + E ++P L+D
Sbjct: 63 VVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVH 122
Query: 544 -ATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEK 602
A + TA Y + +++ G+ +LIHA +GG+G + AR++ A + TV T EK
Sbjct: 123 LAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEK 182
Query: 603 REFIRKTFPFIKEENIG-----NSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRC 657
E RK G N F ++V + T G+GVD+V +S+ ++ LQ S+ C
Sbjct: 183 AETARKL---------GCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDC 233
Query: 658 LAQGGRFLEIG-------KFDLANN-NMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQ 709
L G G + + + G R +H + + +
Sbjct: 234 LRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWH-------YMSNRSEIDEGS 286
Query: 710 KALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753
K L A+ AG + V FP + A +YM + IG +++
Sbjct: 287 KCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLL 330
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 9e-32
Identities = 54/286 (18%), Positives = 105/286 (36%), Gaps = 45/286 (15%)
Query: 495 VIGFEYSGRLRDSGKRVMGL--------TSGRSLANCCE-TDVEMAWEIPDQWTLED--- 542
V+G E SG + GK V S + A + + ++P + E+
Sbjct: 66 VLGREASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKLPKGTSDEELKL 125
Query: 543 AATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEK 602
A TA+ ++KG+ +L+ A +GGVG L + A T EK
Sbjct: 126 YAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEK 185
Query: 603 REFIRKTFPFIKEENIG-----NSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRC 657
+ ++ G N+ + V+K T G+GVD +S+ ++ + S+
Sbjct: 186 LKIAKEY---------GAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAA 236
Query: 658 LAQGGRFLEIG-------KFDLANNNMLGME--VFMRETSFHGVMLDNFFFAEQEWKMSL 708
L + G F+ G F + L + +R + + A+ E
Sbjct: 237 LKRKGVFVSFGNASGLIPPFSI---TRLSPKNITLVRPQLYG-------YIADPEEWKYY 286
Query: 709 QKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754
+++ + + +P A + + K +GK++++I
Sbjct: 287 SDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLEI 332
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 2e-31
Identities = 51/281 (18%), Positives = 98/281 (34%), Gaps = 38/281 (13%)
Query: 495 VIGFEYSGRLRDSGKRVMGLTSGRSLANC-------CET---DVEMAWEIPDQWTLEDAA 544
+G E +G + G V G +A E ++ D + E AA
Sbjct: 60 GLGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAA 119
Query: 545 TVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKRE 604
+ T Y + Q++ GE IL HA +GGVG A A+ + A++ TV +PEK
Sbjct: 120 ALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAA 179
Query: 605 FIRKTFPFIKEENIG-----NSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLA 659
+ +G + + V++ T G+ +V + + ++ S+ +A
Sbjct: 180 HAKA---------LGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVA 230
Query: 660 QGGRFLEIG-------KFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKAL 712
G + G +L R T + + ++ L
Sbjct: 231 PRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGS-------YANNAQNLQTMADEL 283
Query: 713 QKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIK 753
+ +G ++ + +A ++A + G I+
Sbjct: 284 FDMLASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTILI 324
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 2e-30
Identities = 48/252 (19%), Positives = 88/252 (34%), Gaps = 48/252 (19%)
Query: 535 PDQWTLEDAATVPCVYATAVYAMF------ICGQMQKGESILIHAGSGGVGQAAINLARY 588
P + E A ++P TA +F +G+++LI G+GGVG A +A+
Sbjct: 114 PKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKA 173
Query: 589 MDAEIFTTVGTPEKREFIRKTFPFIKEENIG-----NSRDTSFEQLVMKRTKGRGVDLVL 643
+ TT E E+ +K +G N +++ Q K VD V
Sbjct: 174 YGLRVITTASRNETIEWTKK---------MGADIVLNHKESLLNQF--KTQGIELVDYVF 222
Query: 644 NSLA-EEKLQASVRCLAQGGRFLEI----GKFDLANNNMLGMEVFMRETSFHGVMLDNFF 698
+ + ++ + G I DL + + SF F
Sbjct: 223 CTFNTDMYYDDMIQLVKPRGHIATIVAFENDQDLN-------ALKPKSLSFSHE----FM 271
Query: 699 FAE---QEWKMSLQ-KALQKA---IDAGAVQPLVRTI---FPEDKVEEAFRYMAAGKHIG 748
FA Q M + L+ ++ QP + + + +A + + + IG
Sbjct: 272 FARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIG 331
Query: 749 KVIIKIRDEEPT 760
K++I + +
Sbjct: 332 KLVINLNEGHHH 343
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 4e-30
Identities = 68/335 (20%), Positives = 123/335 (36%), Gaps = 58/335 (17%)
Query: 462 QIYYSSINFRDIMLTTAKLAPEVIESRRLYQHC--------VIGFEYSGRLRDSGK---- 509
+++ +S+N D+ + + A + R +G + SG + + G
Sbjct: 56 KVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKY 115
Query: 510 -----RVMGLTSGR---SLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICG 561
V +L+ P T AA++P V TA A+ G
Sbjct: 116 FKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVG 175
Query: 562 QMQ----KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEEN 617
+ G+ +LI SGGVG AI + + DA + + E +RK
Sbjct: 176 GLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQ-DASELVRK--------- 225
Query: 618 IG-----NSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQ--GGRFLEIGKF 670
+G + + S E+ + + D +L+++ + L + G ++ +
Sbjct: 226 LGADDVIDYKSGSVEEQL---KSLKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTP 282
Query: 671 DLANNNMLGMEVFMRETSF-----------HGVMLDNFFFAEQEWKMSLQKALQKAIDAG 719
L N + LG+ M +T GV FF + + + +DAG
Sbjct: 283 FLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCL---DDIAELVDAG 339
Query: 720 AVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754
++P++ FP KV EAF + G GK +I +
Sbjct: 340 KIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV 374
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 6e-30
Identities = 55/283 (19%), Positives = 102/283 (36%), Gaps = 40/283 (14%)
Query: 495 VIGFEYSGRLRDSGKRVMGLTSGRSLANC-------CET---DVEMAWEIPDQWTLEDAA 544
+G E +G + G V + +G + + A +P + E AA
Sbjct: 60 GLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAA 119
Query: 545 TVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKRE 604
T Y + +++ E L HA +GGVG A A+ + A++ TVGT +K +
Sbjct: 120 ASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ 179
Query: 605 FIRKTFPFIKEENIG-----NSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLA 659
K G N R+ + + + T G+ V +V +S+ + + S+ CL
Sbjct: 180 SALK---------AGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQ 230
Query: 660 QGGRFLEIG-------KFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKAL 712
+ G + G +L N G R + + +E L
Sbjct: 231 RRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQG-------YITTREELTEASNEL 283
Query: 713 QKAIDAGAVQPLV--RTIFPEDKVEEAFRYMAAGKHIGKVIIK 753
I +G ++ V + +P + A + + G ++
Sbjct: 284 FSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI 326
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 9e-28
Identities = 41/285 (14%), Positives = 92/285 (32%), Gaps = 45/285 (15%)
Query: 508 GKRVMGLTSGRSLANC--------CETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFI 559
G RV G + T + +IP + E AA +P +TA AM +
Sbjct: 87 GDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKL 146
Query: 560 CG------------QMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIR 607
G K +L++ GS + + R T P + +
Sbjct: 147 LGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCS-PHNFDLAK 205
Query: 608 K---TFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEK-LQASVRCLAQ-GG 662
F + R + Q + TK + L+ + + + + GG
Sbjct: 206 SRGAEEVF-------DYRAPNLAQTIRTYTKN-NLRYALDCITNVESTTFCFAAIGRAGG 257
Query: 663 RFL--------EIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQK 714
++ + + + LG +F +++ E+++ L + +
Sbjct: 258 HYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQ 317
Query: 715 AIDAGAVQPLVRTIFPE--DKVEEAFRYMAAGKHIG-KVIIKIRD 756
++ G + + D +++ + G+ G K+++++
Sbjct: 318 LVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEG 362
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 1e-27
Identities = 46/254 (18%), Positives = 80/254 (31%), Gaps = 30/254 (11%)
Query: 508 GKRVMGLTSGR---SLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQ 564
G+RV TS + S A + + +PD + E AA +PC TA + F +
Sbjct: 83 GRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTA-WQAFEKIPLT 141
Query: 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIG-NSRD 623
K +LI G G V + + + K G
Sbjct: 142 KQREVLIV-GFGAVNNLLTQMLNNAGYVVDLVSA-SLSQALAAK---------RGVRHLY 190
Query: 624 TSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVF 683
Q+ + + +++ + A V L G + I D + F
Sbjct: 191 REPSQVT------QKYFAIFDAVNSQNAAALVPSLKANGHIICIQ--DRIPAPI--DPAF 240
Query: 684 MRETSFHGVMLDNFFFAEQEWKMSLQ----KALQKAIDAGAVQPLVRTIFPEDKVEEAFR 739
R S+H + L + +AL I G ++ IF +++ EA
Sbjct: 241 TRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRFEQMIEALD 300
Query: 740 YMAAGKHIGKVIIK 753
+ K + +
Sbjct: 301 HSEQTKLKTVLTLN 314
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 5e-27
Identities = 35/296 (11%), Positives = 84/296 (28%), Gaps = 41/296 (13%)
Query: 489 RLYQHCVIGFEYSGRLRDSGK---------RVMGLTSGRSLANCCETDVEMAWEIPDQWT 539
RL +G E +G + ++G + + G + + +P+ T
Sbjct: 87 RLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIGGAMYSQYRCIPADQCLVLPEGAT 146
Query: 540 LEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599
D A+ TA M +++ +++ A + +GQ + ++ V
Sbjct: 147 PADGASSFVNPLTA-LGMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRK 205
Query: 600 PEKREFIRKTFPFIKEENIG-----NSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQAS 654
E+ + ++ G N+ +F Q + + G + ++ KL
Sbjct: 206 QEQADLLKA---------QGAVHVCNAASPTFMQDLTEALVSTGATIAFDATGGGKLGGQ 256
Query: 655 VRCLAQGGRFLEIGKFDLANNNMLGMEVF-----MRETSFHGVMLDNF---FFAEQEW-- 704
+ + ++ + T F+ + + +
Sbjct: 257 ILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFNRNFGMAWGMGGWLLFPFLQ 316
Query: 705 --KMSLQKALQKAIDA---GAVQPLVRTIFPEDKVEEAFRYMAAGKHI--GKVIIK 753
AL++ + A +V + K K +I
Sbjct: 317 KIGRERANALKQRVVAELKTTFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLIN 372
|
| >2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A Length = 91 | Back alignment and structure |
|---|
Score = 95.9 bits (238), Expect = 7e-24
Identities = 33/87 (37%), Positives = 58/87 (66%)
Query: 1013 KAGSGGATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQ 1072
++V+AV +ILG+RDL V+L S+LA+LG+D++M+VE++QTLERE + L+ +
Sbjct: 2 TRDRDSQRDLVEAVAHILGIRDLAAVNLDSSLADLGLDALMSVEVRQTLERELNLVLSVR 61
Query: 1073 DIRGLTFAKLQDIAVSFENDDKSKPVS 1099
++R LT KLQ+++ + + +
Sbjct: 62 EVRQLTLRKLQELSSKADEASELACPT 88
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 1e-23
Identities = 46/248 (18%), Positives = 84/248 (33%), Gaps = 39/248 (15%)
Query: 527 DVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQK-----GESILIHAGSGGVGQA 581
D + P +AA +P TA A F + K +ILI G+GGVG
Sbjct: 128 DERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSI 187
Query: 582 AINLARYM-DAEIFTTVGTPEKREFIRKTFPFIKEENIG-----NSRDTSFEQLVMKRTK 635
A+ +AR D + T PE +E+++ +G + ++
Sbjct: 188 AVQIARQRTDLTVIATASRPETQEWVKS---------LGAHHVIDHSKPLAAEV--AALG 236
Query: 636 GRGVDLVLNSLA-EEKLQASVRCLAQGGRFLEI---GKFDLANNNMLGMEVFMRETSFHG 691
V ++ ++ +A GRF I FD+ + S H
Sbjct: 237 LGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPSAFDIM-------LFKRKAVSIHH 289
Query: 692 VMLDNFFFAEQEWKMSLQKALQKA---IDAGAVQPLVRTIFP---EDKVEEAFRYMAAGK 745
++ + L +D G ++ + +++A + +G
Sbjct: 290 ELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGT 349
Query: 746 HIGKVIIK 753
GKV+I+
Sbjct: 350 ARGKVVIE 357
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 6e-21
Identities = 44/239 (18%), Positives = 87/239 (36%), Gaps = 33/239 (13%)
Query: 524 CETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAI 583
+ +AA + C T Y + +++L+ GG+G A+
Sbjct: 130 VIVPHYKYMYKLRRLNAVEAAPLTCSGITT-YRAVRKASLDPTKTLLVVGAGGGLGTMAV 188
Query: 584 NLARYMD-AEIFTTVGTPEKREFIRKTFPFIKEENIG-----NSRDTSFEQLVMKRTKGR 637
+A+ + A I E E ++ G N+ + + T+ +
Sbjct: 189 QIAKAVSGATIIGVDVREEAVEAAKR---------AGADYVINASMQDPLAEIRRITESK 239
Query: 638 GVDLVLNSLAEEK-LQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDN 696
GVD V++ EK L + LA+ G+++ +G F A+ + + + E F G
Sbjct: 240 GVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFG-ADLHYHAPLITLSEIQFVG----- 293
Query: 697 FFFAEQEWKMSLQKALQKAID---AGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752
+ Q + AG V+P++ ++ EA + K IG+ ++
Sbjct: 294 -------SLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVL 345
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 1e-19
Identities = 45/254 (17%), Positives = 98/254 (38%), Gaps = 27/254 (10%)
Query: 510 RVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATV-PCVYATAVYAMFICGQMQKGES 568
+G A + + +P +ED A + P ++A + Q + ++
Sbjct: 107 DFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEP--ITVGLHAFHL-AQGCENKN 163
Query: 569 ILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRK-----TFPFIKEENIGNSR 622
++I G+G +G AI A + A + + EK + TF NS
Sbjct: 164 VII-IGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTF---------NSS 213
Query: 623 DTSFEQLVMKRTKGRGVDLVLN-SLAEEKLQASVRCLAQGGRFLEIGKF--DLANNNMLG 679
+ S Q+ + R L+L + + ++ +V + +G DL +
Sbjct: 214 EMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATF 273
Query: 680 MEVFMRETSFHGVML-DNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAF 738
++ +E + G + + + QEW+ + + ++ + ++PL+ + +A
Sbjct: 274 GKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLS---LEPLIAHRGSFESFAQAV 330
Query: 739 RYMAAGKHIGKVII 752
R +A GKV++
Sbjct: 331 RDIARNAMPGKVLL 344
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 Length = 230 | Back alignment and structure |
|---|
Score = 86.4 bits (214), Expect = 7e-19
Identities = 34/209 (16%), Positives = 66/209 (31%), Gaps = 16/209 (7%)
Query: 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLV-FQFDHTNPPDTIPEMADSLLPHFKKRL 1213
IF P + G + + L+ + + L F F + D +K
Sbjct: 15 DQEQIIFAFPPVLGYGLMYQNLSSRLPSYKLCAFDFI------EEEDRLDRYADLIQKLQ 68
Query: 1214 VHGTDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKL 1272
G + L G+S G +A E A KLE G + +VDS ++ L + +
Sbjct: 69 PEGP--LTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDG-RTVESDV 125
Query: 1273 NYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTD--PKHKAFGGNITLLRPTEQALP 1330
+++ ++ + + H ++ + Y +I LL
Sbjct: 126 EALMNVNRDNEALNS---EAVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDI 182
Query: 1331 TAEDYGLSKVCKKPVKVHFVDGNHFTVLD 1359
+ ++ G H +L
Sbjct: 183 PEWLASWEEATTGAYRMKRGFGTHAEMLQ 211
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} Length = 319 | Back alignment and structure |
|---|
Score = 88.0 bits (218), Expect = 9e-19
Identities = 40/209 (19%), Positives = 68/209 (32%), Gaps = 17/209 (8%)
Query: 1160 IFMVPGIEGIATVLE--PLAKNINAQ--VLVFQ---FDH-TNPPDTIPEMADSLLPHFKK 1211
+ +V LA+ ++A V F P T+ + SL
Sbjct: 84 LILVCPTVMTTGPQVYSRLAEELDAGRRVSALVPPGFHGGQALPATLTVLVRSLADVV-- 141
Query: 1212 RLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNA 1270
+ E L G S GG+VA E+A +LE G + L+DS + R + +
Sbjct: 142 QAEVADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYS-FDGDGGRPEELFRS 200
Query: 1271 KLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQALP 1330
LN QR A + + + +RP + +
Sbjct: 201 ALNERFVEYLRLTGGGNLSQRITAQVWCLEL-----LRGWRPEGLTAPTLYVRPAQPLVE 255
Query: 1331 TAEDYGLSKVCKKPVKVHFVDGNHFTVLD 1359
+ V +V G+HFT+++
Sbjct: 256 QEKPEWRGDVLAAMGQVVEAPGDHFTIIE 284
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A Length = 300 | Back alignment and structure |
|---|
Score = 84.5 bits (209), Expect = 9e-18
Identities = 38/209 (18%), Positives = 63/209 (30%), Gaps = 23/209 (11%)
Query: 1160 IFMVPGIEGIATVLE--PLAKNINAQ--VLVFQF----DHTNPPDTIPEMADSLLPHFKK 1211
+ G I+ E LA + V + P ++ +A
Sbjct: 70 VICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPLPSSMAAVAAVQADAV-- 127
Query: 1212 RLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNA 1270
G + G S G ++A LA +L G + L+D Y + W
Sbjct: 128 IRTQGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDV---YPPGHQDAMNAWLE 184
Query: 1271 KLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQALP 1330
+L + + T R A AY R+T ++ G L+ E +
Sbjct: 185 EL---TATLFDRETVRMDDTRLTALGAYDRLTG--QWRPR---ETGLPTLLVSAGE-PMG 235
Query: 1331 TAEDYGLSKVCKKPVKVHFVDGNHFTVLD 1359
D V G+HFT++
Sbjct: 236 PWPDDSWKPTWPFEHDTVAVPGDHFTMVQ 264
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 6e-16
Identities = 44/263 (16%), Positives = 89/263 (33%), Gaps = 33/263 (12%)
Query: 510 RVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATV-PCVYATAVYAMFICGQMQKGES 568
R +G+ A + A+EIP A P A ++ + + ++ G +
Sbjct: 129 RAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEP--LACCLHGVDL-SGIKAGST 185
Query: 569 ILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIG-----NSR 622
+ I G G +G + LAR A + + KR + +G +
Sbjct: 186 VAI-LGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE---------VGATATVDPS 235
Query: 623 DTSFEQLVMKRTK--GRGVDLVLN-SLAEEKLQASVRCLAQGGRFLEIGKFDLANN-NML 678
+ + GVD+V+ + E ++ S R GG + +G +
Sbjct: 236 AGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIE 295
Query: 679 GMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAF 738
++ RE G ++ F + + AI+ + ++ D+ +
Sbjct: 296 PFDILFRELRVLGSFINPF-----VHRRAADLVATGAIE---IDRMISRRISLDEAPDVI 347
Query: 739 RYMAAGKHIGKVIIKIRDEEPTK 761
AA + KV++ E +
Sbjct: 348 SNPAAAGEV-KVLVIPSAERVAQ 369
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 1e-15
Identities = 53/240 (22%), Positives = 94/240 (39%), Gaps = 38/240 (15%)
Query: 529 EMAWEIPDQWTLEDAATV-PCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLAR 587
+ W+ P E A P AV + G+S+LI G+G +G I +A+
Sbjct: 134 QNIWKNPKSIPPEYATLQEP--LGNAVDTVL--AGPISGKSVLI-TGAGPLGLLGIAVAK 188
Query: 588 YMDA-EIFTTVGTPEKREFIRK---TFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVL 643
A + + + +RE +K + N + + VM T G GVD+ L
Sbjct: 189 ASGAYPVIVSEPSDFRRELAKKVGADYVI-------NPFEEDVVKEVMDITDGNGVDVFL 241
Query: 644 N-SLAEEKLQASVRCLAQGGRFLEIG------KFDLANNNMLGMEVFMRETSFHGVMLDN 696
S A + L+ ++ + GR +G D N + + + +G+ +
Sbjct: 242 EFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNN------LIIFKALTIYGITGRH 295
Query: 697 FFFAEQEWKMSLQKALQKAIDAGAVQPLV-RTIFPEDKVEEAFRYMAAGKHIGKVIIKIR 755
+ + W + ++ + P++ DK EEAF M AGK GKV+ ++
Sbjct: 296 LW---ETWYTVSRLLQSGKLN---LDPIITHKYKGFDKYEEAFELMRAGKT-GKVVFMLK 348
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* Length = 244 | Back alignment and structure |
|---|
Score = 77.2 bits (190), Expect = 1e-15
Identities = 35/209 (16%), Positives = 63/209 (30%), Gaps = 25/209 (11%)
Query: 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTNPPDTIPEMADSLLPHFKKRLV 1214
+F P I G + LA +N + V+ F + + +
Sbjct: 20 QGGKNLFCFPPISGFGIYFKDLALQLNHKAAVYGFHFI----EEDSRIEQYVSRITEIQP 75
Query: 1215 HGTDEIKLVGFSFGGMVALELAIKLEQLGTK-CHLYLVDSAPDYVLTSLRKLPDWNAKLN 1273
G L+G+S GG +A E+ +EQ G + +VD+ S+ + +
Sbjct: 76 EGP--YVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKK--DQSITADTENDDSAA 131
Query: 1274 YFLDLMPEDAT-HSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQALPTA 1332
Y + + E R YQ A NI + Q +
Sbjct: 132 YLPEAVRETVMQKKRCYQEYWAQL-------------INEGRIKSNIHFIEAGIQTETSG 178
Query: 1333 ED--YGLSKVCKKPVKVHFVDGNHFTVLD 1359
++ + G H +L+
Sbjct: 179 AMVLQKWQDAAEEGYAEYTGYGAHKDMLE 207
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 2e-15
Identities = 57/229 (24%), Positives = 92/229 (40%), Gaps = 24/229 (10%)
Query: 529 EMAWEIPDQWTLEDAATV-PCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLAR 587
E AW P E AA + P + AV+ ++ G G+S+LI G+G +G A + R
Sbjct: 130 ENAWVNPKDLPFEVAAILEP--FGNAVHTVYA-GSGVSGKSVLI-TGAGPIGLMAAMVVR 185
Query: 588 YMDA-EIFTTVGTPEKREFIRK--TFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLN 644
A I + P + F R N + ++V + T G GV+++L
Sbjct: 186 ASGAGPILVSDPNPYRLAFARPYADRLV-------NPLEEDLLEVVRRVT-GSGVEVLLE 237
Query: 645 -SLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQE 703
S E + + L GG +G L E+ MR + G+ + Q
Sbjct: 238 FSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLW---QT 294
Query: 704 WKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752
W +D + PL+ P + EAF +A+G+ + KVI+
Sbjct: 295 WMQGTALVYSGRVD---LSPLLTHRLPLSRYREAFGLLASGQAV-KVIL 339
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380 | Back alignment and structure |
|---|
Score = 78.0 bits (193), Expect = 3e-15
Identities = 47/242 (19%), Positives = 94/242 (38%), Gaps = 44/242 (18%)
Query: 531 AWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMD 590
++ ++ L+ A C ATA +A + G++++I G+G +G + +AR +
Sbjct: 161 VLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVI-QGAGPLGLFGVVIARSLG 219
Query: 591 AE-IFTTVGTPEKREFIRK---TFPFIKEENIGNSRDTSFE---QLVMKRTKGRGVDLVL 643
AE + G+P + + + + N R+TS E + +M T GRG D +L
Sbjct: 220 AENVIVIAGSPNRLKLAEEIGADL-TL------NRRETSVEERRKAIMDITHGRGADFIL 272
Query: 644 ----NSLAEEKLQASVRCLAQGGRFLEIG--------KFDLANNNMLGMEVFMRETSFHG 691
+S A L L +GG + G F + + ++ +F G
Sbjct: 273 EATGDSRA---LLEGSELLRRGGFYSVAGVAVPQDPVPFKVYE------WLVLKNATFKG 323
Query: 692 VMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVI 751
+ + + ++ + + L+ P + +A M + + KVI
Sbjct: 324 I----WVSDTSHFVKTVSITSRNYQL---LSKLITHRLPLKEANKALELMESRE-ALKVI 375
Query: 752 IK 753
+
Sbjct: 376 LY 377
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A Length = 329 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 8e-15
Identities = 34/224 (15%), Positives = 62/224 (27%), Gaps = 29/224 (12%)
Query: 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLV--FQF----DHTNPPDTIPEMADSLLPH 1208
GN T+F G A L++ ++ Q + Q + E+ ++ L
Sbjct: 99 GNGPTLFCFHPASGFAWQFSVLSRYLDPQWSIIGIQSPRPNGPMQTAANLDEVCEAHLAT 158
Query: 1209 FKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAP------------ 1255
++ HG L+G+S GG +A +A +L G + L L+D+ P
Sbjct: 159 LLEQQPHG--PYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEAN 216
Query: 1256 DYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAF 1315
L ++ + T F
Sbjct: 217 GLDPEVLAEINREREAFLAAQQGSTSTELFTTIEGNYADAVRL--------LTTAHSVPF 268
Query: 1316 GGNITLLRPTEQALPTAEDYGLSKVCKKPVKVHFVDGNHFTVLD 1359
G TL + ++ D H ++
Sbjct: 269 DGKATLFVAERTLQEGMSPERAWSPWIAELDIYRQDCAHVDIIS 312
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 77.6 bits (190), Expect = 2e-14
Identities = 88/634 (13%), Positives = 175/634 (27%), Gaps = 216/634 (34%)
Query: 129 VYIPADVKTEMVR-IPDQYK--IPRTEGEAIELQSRDIYKELRLRGYHYKGLFRSLNVAD 185
V+ A V + + D K + + E + I + S+D LF +L
Sbjct: 24 VFEDAFVDNFDCKDVQDMPKSILSKEEIDHI-IMSKDAVSGTLR-------LFWTLL--- 72
Query: 186 GAGTQGKIRWHNNWVAFMDNMLQ------LQILQYDTRGLFVPTSIQKLVINVSDHVNLL 239
++ + F++ +L+ + ++ + R P+ + ++ I + + L
Sbjct: 73 ---SKQE----EMVQKFVEEVLRINYKFLMSPIKTEQRQ---PSMMTRMYI---EQRDRL 119
Query: 240 STLDEETPEYPVFVYKEVEVIKSG--------GVEIRGLKASAIPRKKPLGEPVLEKYKF 291
++ +Y V + ++ V I G+ S G+ +
Sbjct: 120 YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS--------GKTWVAL-DV 170
Query: 292 IQNEGLKVKSPVKISPLVIKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEP--LSG 349
+ ++ K KI W+ + QK LL Q++P S
Sbjct: 171 CLSYKVQCKMDFKI------------FWLNLKNCNSPETVLEMLQK--LLYQIDPNWTSR 216
Query: 350 IIGFFNC-IRKETGGER----------TRCFEILDKNAPPFNPE--DPFYKVQVEKDLAV 396
N +R + C +L N N + + F +L+
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL-NV--QNAKAWNAF-------NLSC 266
Query: 397 NIL---RNGQ------WGTYRHSILQPIKRVMTDH------------------------- 422
IL R Q T H L +T
Sbjct: 267 KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN 326
Query: 423 ----AYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTA 478
+ I +R ++ TW+ WK + D + I SS+N
Sbjct: 327 PRRLSIIAESIRDGLA--TWDN-------WKHVNCDKLTTIIE----SSLN--------- 364
Query: 479 KLAPEVIESRRLYQHCVIGFEYS--------GRL-----RDSGKRVMGLTSGRSLANC-- 523
L P E R+++ + F S + + V+ SL
Sbjct: 365 VLEPA--EYRKMFDRLSV-FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQP 421
Query: 524 -----------------CETDVEM------AWEIPDQWTLEDAATVPC---VYATAVYAM 557
E + + + IP + +D Y+ + +
Sbjct: 422 KESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHL 481
Query: 558 FICGQMQKGESI-------------LIHAGS-----GGVGQAAINLARYMDAEIFTTVGT 599
++ + H + G + L Y +
Sbjct: 482 KNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKP---YICDND 538
Query: 600 PEKREFIRKTFPFIK--EENIGNSRDTSFEQLVM 631
P+ + F+ EEN+ S+ T ++ +
Sbjct: 539 PKYERLVNAILDFLPKIEENLICSKYTDLLRIAL 572
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.9 bits (152), Expect = 7e-10
Identities = 101/781 (12%), Positives = 214/781 (27%), Gaps = 287/781 (36%)
Query: 588 YMDAEIFTTVGTPEKREFIRKTFP-----FIKEENIGNSRDTSFEQLVMKRTKGRGVDLV 642
+MD E T E + + F+ + + +D + ++ + + +D +
Sbjct: 6 HMDFE------TGEHQYQYKDILSVFEDAFVDNFDCKDVQD--MPKSILSKEE---IDHI 54
Query: 643 LNSLAEEKLQASVRCLAQGGRFLEIGKFD-LANNNMLGMEVFMRETSFHGVMLDNFFFAE 701
+ S G L F L + ++ F+ E V+ N+
Sbjct: 55 IMSKDAV----------SGTLRL----FWTLLSKQEEMVQKFVEE-----VLRINY---- 91
Query: 702 QEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI---RDEE 758
++ MS I QP + T ++ + + +V K R +
Sbjct: 92 -KFLMS-------PIKTEQRQPSMMTRMYIEQRDRLYN-------DNQVFAKYNVSRLQP 136
Query: 759 PTKICTPKVKQLLAVPRYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSG-- 816
K+ +Q L ++ G+ G G W+ L + +
Sbjct: 137 YLKL-----RQAL-----LELRPAKNVLIDGVLGSG---KTWVALDVCLSYKVQCKMDFK 183
Query: 817 ---VKNGY-----------QALRIKIWKSYDVQVLISTDDI----TTEAGVVNLLTE--- 855
+ Q L +I ++ + S++ + +A + LL
Sbjct: 184 IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243
Query: 856 ANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVV 915
N L +VL + Q + +NA F+ + + T
Sbjct: 244 ENCL----------LVLLNV----QNAKAWNA-----------FNLSCKILLTT------ 272
Query: 916 FSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGAVGEVGLVADMAEDNLE 975
R T++ A + + L ++
Sbjct: 273 -------R-FKQVTDFLSAATTTHISLD----HHSMTLT---------------PDEVKS 305
Query: 976 VVIGGTLQQRISNCLECLNEFL----IQSEPIVASMVVAEKKAGSGGATNIVDAVINILG 1031
+ + L+C + L + + P S++ + D +
Sbjct: 306 L---------LLKYLDCRPQDLPREVLTTNPRRLSIIAESIR----------DGLATWDN 346
Query: 1032 LRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIRGLTFAKLQDIAVSFEN 1091
+ + L + I+ +L L P + R + ++V F
Sbjct: 347 WKHVNCDKLTTI-------------IESSLN-----VLEPAEYRKM----FDRLSV-FPP 383
Query: 1092 DDKSKPVSTEASGGQVTALSVEDIPDVGIQYL---MRTIGDEILANKPVIRLPSLKNNGS 1148
IP + + + + ++ NK SL
Sbjct: 384 S--------------------AHIPTILLSLIWFDVIKSDVMVVVNKLHKY--SL----- 416
Query: 1149 TVEEPVGNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTNPPDTIPEMADSLLPH 1208
VE+ + +P I + + + S++ H
Sbjct: 417 -VEK--QPKESTISIPSI---------------------YLELKVKLENEYALHRSIVDH 452
Query: 1209 FK-KRLVHGTDEIKLVG----FSFGG--MVALELAIKLEQLGTKCHLYLVDSAPDYVLTS 1261
+ + D I +S G + +E ++ ++L D+
Sbjct: 453 YNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFR---MVFL-----DFRFLE 504
Query: 1262 LRKL----PDWNAK---LNYFLDLMPEDATHSRTYQRNLA--HAAYKR-ITSILKYTDPK 1311
+K+ WNA LN L + Y+ + Y+R + +IL + PK
Sbjct: 505 -QKIRHDSTAWNASGSILNTLQQL--------KFYKPYICDNDPKYERLVNAILDFL-PK 554
Query: 1312 H 1312
Sbjct: 555 I 555
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.9 bits (139), Expect = 2e-08
Identities = 89/623 (14%), Positives = 170/623 (27%), Gaps = 174/623 (27%)
Query: 360 ETGGERTRCFEILDKNAPPFNPEDPFYKVQVEKDLAVNILRNGQWGTYRHSILQPIKRVM 419
ETG + + +IL F VQ D+ +IL + H I+
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFDCKDVQ---DMPKSILSKEE---IDHIIMSKDAVSG 63
Query: 420 TD--------------HAYINALVRGD----MSSLTWE-QGPVNMKTWKKYSKDNINHDI 460
T ++ ++R + MS + E + P M +D + +D
Sbjct: 64 TLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN 123
Query: 461 AQIY--YSSINFRDIM-LTTA--KLAPEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLT 515
Q++ Y+ + + L A +L P + + V+G GK + L
Sbjct: 124 -QVFAKYNVSRLQPYLKLRQALLELRPA----KNVLIDGVLGS---------GKTWVALD 169
Query: 516 SGRSLANCCETDVEMAWEIPDQWTLEDAATV-PCVYATAVYAMF--ICGQMQKGESILIH 572
S C+ D ++ W + C V M + Q+ +
Sbjct: 170 VCLSYKVQCKMDFKIFW-----------LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218
Query: 573 AGSG---GVGQAAINLARYMDAEIFTT-------VGTPEKREFIRKTFPFIKEENIG--- 619
S + L R + ++ + V + F N+
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAK----AWNAF------NLSCKI 268
Query: 620 --NSRDTS-FEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDL---- 672
+R + L T +D +L ++ L ++L+ DL
Sbjct: 269 LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE---VKSLLL---KYLDCRPQDLPREV 322
Query: 673 ANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAG--AVQP-LVR--- 726
N + + + + WK L I++ ++P R
Sbjct: 323 LTTNPRRLSII-------AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF 375
Query: 727 ---TIFPED-KVEEAFRYMAAGKHIGKVI----IKIRDEEPTKICTPKVKQLLAVPRYYA 778
++FP + ++ + + + K L +
Sbjct: 376 DRLSVFPPSAHIPT------------ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ--- 420
Query: 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLI 838
K I + + L KL AL I Y++
Sbjct: 421 --PKESTI---------SIPS-IYLELKVKL---------ENEYALHRSIVDHYNIPKTF 459
Query: 839 STDDITTEAGVVNLLTEANKLGPVDG-IFN-LAVVLKDALFENQTPE------DFNASLG 890
+DD+ +D ++ + LK+ + DF L
Sbjct: 460 DSDDLIPP--------------YLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRF-LE 504
Query: 891 PKANATKYFDKYSRTMCPTLGQF 913
K S ++ TL Q
Sbjct: 505 QKIRHDSTAWNASGSILNTLQQL 527
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.9 bits (113), Expect = 2e-05
Identities = 50/321 (15%), Positives = 102/321 (31%), Gaps = 113/321 (35%)
Query: 1107 VTALSVEDIPDVGIQYLMRTIGDEILANKPVI----RL-PSLKNNG-STVEEPVG---NN 1157
V +D+ D+ L + D I+ +K + RL +L + V++ V
Sbjct: 30 VDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRI 89
Query: 1158 NTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTN------PPDTIP---------EMA 1202
N F++ I T E ++ ++ + Q D + +
Sbjct: 90 NYKFLM---SPIKT--EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQAL 144
Query: 1203 DSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIK-LEQLGTKCHL----YLVDSA--- 1254
L P K L+ G ++G G +A+ +C + + ++
Sbjct: 145 LELRPA-KNVLIDG-----VLGS--GKTW---VALDVCLSYKVQCKMDFKIFWLNLKNCN 193
Query: 1255 -PDYVLTSLRKL-----PDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYT 1308
P+ VL L+KL P+W ++ + HS + + H+ + +LK
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSD-----------HSSNIKLRI-HSIQAELRRLLK-- 239
Query: 1309 DPKHKAFGGNITLLRPTEQALPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIM 1368
++ LL VL N+++A+
Sbjct: 240 SKPYE-----NCLL----------------------------------VLLNVQNAKAW- 259
Query: 1369 HEDSTDF--KTALFTSDDTGL 1387
++ + K L T+ +
Sbjct: 260 --NAFNLSCKI-LLTTRFKQV 277
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 1e-04
Identities = 61/347 (17%), Positives = 106/347 (30%), Gaps = 99/347 (28%)
Query: 1049 MDSMMAV------EIKQTLEREFEVFLTPQDI----RG-LTFAKLQDIAVSFENDDKSKP 1097
MD +I E F +D+ + L+ ++ I +S + +
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66
Query: 1098 V--STEASGGQVTALSVEDIPDVGIQYLMRTIGDEILANKPVIRLPSLKNNG-STVEEPV 1154
+ + + ++ VE++ + ++LM I E R PS+ + +
Sbjct: 67 LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQ-------RQPSMMTRMYIEQRDRL 119
Query: 1155 GNNNTIFM---VPGIEGIATV------LEPLAKNIN-------------AQVL------- 1185
N+N +F V ++ + L P AKN+ V
Sbjct: 120 YNDNQVFAKYNVSRLQPYLKLRQALLELRP-AKNVLIDGVLGSGKTWVALDVCLSYKVQC 178
Query: 1186 -----VF--QFDHTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIK 1238
+F + N P+T+ EM LL +D IK
Sbjct: 179 KMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS--------------NIK 224
Query: 1239 LEQLGTKCHLYLVDSAPDYVLTSLRKLPD-WNAK-LNYFLDLMPEDATHSRTYQRNLAHA 1296
L + L + + Y L L + NAK N F +L + L
Sbjct: 225 LRIHSIQAELRRLLKSKPYE-NCLLVLLNVQNAKAWNAF-NL------SCKI----LLTT 272
Query: 1297 AYKRITSILKYTDPKHKAFGGNITLLRPTE-------------QALP 1330
+K++T L H + + L P E Q LP
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP 319
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 9e-14
Identities = 37/264 (14%), Positives = 93/264 (35%), Gaps = 39/264 (14%)
Query: 510 RVMGLTSGRSLANCCETDVEMAWEIPDQW-------TLEDAATV-PCVYATAVYAMFIC- 560
+G + A + D + AW + + + V P + A A+ +
Sbjct: 151 NELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEP--TSVAYNAVIVRG 208
Query: 561 GQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIG 619
G ++ G++++I G G +G AA+ + ++ A ++ + + +R ++ +G
Sbjct: 209 GGIRPGDNVVI-LGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE---------LG 258
Query: 620 -----NSRDTSFEQLVMKRTKGRGVDLVLN-SLAEEKLQASVRCLAQGGRF--LEIGKFD 671
+ +F + V+ T G G L L + + + + + R +
Sbjct: 259 ADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVA 318
Query: 672 LANNNML--GMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIF 729
A+ + G +R G + + + +D + ++
Sbjct: 319 RADAKIPLTGEVFQVRRAQIVGSQG---HSGHGTFPRVIS-LMASGMD---MTKIISKTV 371
Query: 730 PEDKVEEAFRYMAAGKHIGKVIIK 753
+++ E + + K + KV +
Sbjct: 372 SMEEIPEYIKRLQTDKSLVKVTML 395
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 2e-13
Identities = 49/277 (17%), Positives = 91/277 (32%), Gaps = 47/277 (16%)
Query: 493 HCVIGFE-YSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYA 551
C G E Y R D G GL S S+A D AA +
Sbjct: 97 ACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGL 156
Query: 552 TAVYAM-FICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTV----GTPEKREFI 606
T +A+ + + G + ++ G GG+G I + R + A V ++
Sbjct: 157 TPYHAISRVLPLLGPGSTAVVI-GVGGLGHVGIQILRAVSA---ARVIAVDLDDDRLALA 212
Query: 607 RKTFPFIKEENIG-----NSRDTSFEQLVMKRTKGRGVDLVLNSLAEEK-LQASVRCLAQ 660
R+ +G S + + + + T G+G V + + + + + + +A
Sbjct: 213 RE---------VGADAAVKSGAGAADA-IRELTGGQGATAVFDFVGAQSTIDTAQQVVAV 262
Query: 661 GGRFLEIGKFDLANNNML--GMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAID- 717
G +G + G + S ++ E L + +
Sbjct: 263 DGHISVVG---IHAGAHAKVGFFMIPFGASVVT----PYWGTRSE--------LMEVVAL 307
Query: 718 --AGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752
AG + T F D+ A+R + G G+ ++
Sbjct: 308 ARAGRLDIHTET-FTLDEGPAAYRRLREGSIRGRGVV 343
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 5e-13
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 65 MAWETVSLMRGELYTEVPVVFENIKFMRATNVPKEGSVEFIVMVQKGSGNFEIVEGGAAI 124
+ W+T++ G ++PVVFE++ +AT +PK G+V V + + S FE+ E G +
Sbjct: 896 IVWKTLARALGLGVEQLPVVFEDVVLHQATILPKTGTVSLEVRLLEASRAFEVSENGNLV 955
Query: 125 VTGKVYIPAD 134
V+GKVY D
Sbjct: 956 VSGKVYQWDD 965
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 2e-12
Identities = 50/247 (20%), Positives = 99/247 (40%), Gaps = 43/247 (17%)
Query: 529 EMAWEIPDQWTLEDAATV-PCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLAR 587
+++PD T E+ A + P + ++A G + G +L+ G+G +G + +A+
Sbjct: 137 AFCYKLPDNVTFEEGALIEP--LSVGIHACRR-GGVTLGHKVLV-CGAGPIGMVTLLVAK 192
Query: 588 YMDA-EIFTTVGTPEKREFIRK---TFPFIKEENIGNSRDTSFEQLVMKRTK--GRGVDL 641
M A ++ T + + ++ S +++ K G ++
Sbjct: 193 AMGAAQVVVTDLSATRLSKAKEIGADLVL-------QISKESPQEIARKVEGQLGCKPEV 245
Query: 642 VLN-SLAEEKLQASVRCLAQGGRFLEIG------KFDLANNNMLGMEVFMRETSFHGVML 694
+ + AE +QA + GG + +G L + +RE GV
Sbjct: 246 TIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPL-------LHAAIREVDIKGV-- 296
Query: 695 DNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754
F + W +++ K+++ V+PLV FP +K EAF G + K+++K
Sbjct: 297 --FRYCN-TWPVAISMLASKSVN---VKPLVTHRFPLEKALEAFETFKKGLGL-KIMLKC 349
Query: 755 --RDEEP 759
D+ P
Sbjct: 350 DPSDQNP 356
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} Length = 265 | Back alignment and structure |
|---|
Score = 68.3 bits (167), Expect = 2e-12
Identities = 42/240 (17%), Positives = 70/240 (29%), Gaps = 40/240 (16%)
Query: 1153 PVGNNNTIFMVPGIEGIATVLEPLAKNINAQVLV--FQ----FDHTNPPDTIPEMADSLL 1206
P+ T+FM+P G A L + + + V D N T M +S
Sbjct: 17 PMVARKTLFMLPDGGGSAFSYASLPR-LKSDTAVVGLNCPYARDPENMNCTHGAMIESFC 75
Query: 1207 PHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKCH-LYLVDS-APDYVLTSLRK 1264
++R G L G+S GG A +A L G + H L ++D+ P + R
Sbjct: 76 NEIRRRQPRGP--YHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRA 133
Query: 1265 LPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYT---------------- 1308
+ + F S L + +L Y
Sbjct: 134 FYEHCNSIGLFATQPGASPDGSTEPPSYLIPHFTAVVDVMLDYKLAPLHARRMPKVGIVW 193
Query: 1309 ------DPKHKAFGGNITLLRPTEQALPTA--EDYGLSKVCKKPVKVHFVDG-NHFTVLD 1359
D + + + + + + DG NHFT++
Sbjct: 194 AADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTI----MPGASFDIVRADGANHFTLMQ 249
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 2e-12
Identities = 43/234 (18%), Positives = 92/234 (39%), Gaps = 42/234 (17%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQM--QKGESILIHAGSGGVGQAAINLARYMDA 591
+ + +AA + T++ A+ + E ++I G GG+ I + + +
Sbjct: 136 KLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMK 195
Query: 592 EIFTTVG---TPEKREFIRKTFPFIKEENIG-----NSRDTSFEQLVMKRTKGRGVDLVL 643
T VG + + R+F + +G +D E L+ K T G G + +
Sbjct: 196 N-ITIVGISRSKKHRDFALE---------LGADYVSEMKDA--ESLINKLTDGLGASIAI 243
Query: 644 NSLAEEK-LQASVRCLAQGGRFLEIG----KFDLANNNMLGMEVFMRETSFHGVMLDNFF 698
+ + E+ + LAQ G + +G + L + + S +G + D
Sbjct: 244 DLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLL-GSNYGSLND--- 299
Query: 699 FAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752
L+ ++ + ++G ++P + P D + +AF + G+ G+ +I
Sbjct: 300 ---------LEDVVRLS-ESGKIKPYIIK-VPLDDINKAFTNLDEGRVDGRQVI 342
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 4e-12
Identities = 42/238 (17%), Positives = 91/238 (38%), Gaps = 32/238 (13%)
Query: 529 EMAWEIPDQWTLEDAATV-PCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLAR 587
+ ++PD +LE+ A + P + V+A G +Q G ++L+ G+G +G ++ A+
Sbjct: 134 DFCHKLPDNVSLEEGALLEP--LSVGVHACRRAG-VQLGTTVLV-IGAGPIGLVSVLAAK 189
Query: 588 YMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTK--GRGVDLVLN- 644
A + T +P + E + + + ++ + G ++ ++
Sbjct: 190 AYGAFVVCTARSPRRLEVAKN-CGADVTLVV-DPAKEEESSIIERIRSAIGDLPNVTIDC 247
Query: 645 SLAEEKLQASVRCLAQGGRFLEIG------KFDLANNNMLGMEVFMRETSFHGVMLDNFF 698
S E+ + + GG + +G L + RE V F
Sbjct: 248 SGNEKCITIGINITRTGGTLMLVGMGSQMVTVPL-------VNACAREIDIKSV----FR 296
Query: 699 FAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGK-HIGKVIIKIR 755
+ ++ ++L+ + V+ LV F ++ +AF + KV+I R
Sbjct: 297 YCN-DYPIALEMVASGRCN---VKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCR 350
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 1e-11
Identities = 44/231 (19%), Positives = 89/231 (38%), Gaps = 43/231 (18%)
Query: 536 DQWTLEDAATVPCVYATAVYAMFICG-QMQKGESILIHAGSGGVGQAAINLARYM-DAEI 593
+ L + A + TA A+ + G + I G GG+G A+ L + M A +
Sbjct: 156 SREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIV-GVGGLGHIAVQLLKVMTPATV 214
Query: 594 FTTVGTPEKREFIRKTFPFIKEENIG-----NSRDTSFEQLVMKRTKGRGVDLVLNSLAE 648
EK + + +G ++R +Q VM+ T+GRGV++ ++ +
Sbjct: 215 IALDVKEEKLKLAER---------LGADHVVDARRDPVKQ-VMELTRGRGVNVAMDFVGS 264
Query: 649 EK-LQASVRCLAQGGRFLEIG---KFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEW 704
+ + + L + GR + +G + + V E SF G ++ N
Sbjct: 265 QATVDYTPYLLGRMGRLIIVGYGGELRFP-----TIRVISSEVSFEGSLVGN-------- 311
Query: 705 KMSLQKALQKAID---AGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVII 752
L + + G V+ V D++ + + G+ +G+ ++
Sbjct: 312 ----YVELHELVTLALQGKVRVEVDI-HKLDEINDVLERLEKGEVLGRAVL 357
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* Length = 267 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 2e-11
Identities = 38/216 (17%), Positives = 69/216 (31%), Gaps = 17/216 (7%)
Query: 1159 TIFMVPGIEGIATVLEPLAKNINAQVLVFQFD--------HTNPPDTIPEMADSLLPHFK 1210
+ +P G A+ PLAK + V V H P D+I + + LL +
Sbjct: 22 RLVCLPHAGGSASFFFPLAKALAPAVEVLAVQYPGRQDRRHEPPVDSIGGLTNRLLEVLR 81
Query: 1211 KRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKCHLYLVDS---APDYVLTSLRKLPD 1267
G + L G S G ++ ELA+++ + G ++L S AP +
Sbjct: 82 P---FGDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGAS 138
Query: 1268 WNAKLNYFLDL--MPEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPT 1325
+ L + A ++ Y + +T+
Sbjct: 139 DERLVAELRKLGGSDAAMLADPELLAMVLPAIRSDYRAVETYRHEPGRRVDCPVTVFTGD 198
Query: 1326 E-QALPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDN 1360
+ E + P + + G HF ++D
Sbjct: 199 HDPRVSVGEARAWEEHTTGPADLRVLPGGHFFLVDQ 234
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A Length = 242 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 3e-11
Identities = 36/213 (16%), Positives = 69/213 (32%), Gaps = 16/213 (7%)
Query: 1159 TIFMVPGIEGIATVLEPLAKNINAQVLVFQFD-------HTNPPDTIPEMADSLLPHFKK 1211
+ P G + PL + + + + T+ + + E+ D
Sbjct: 15 QLICFPFAGGYSASFRPLHAFLQGECEMLAAEPPGHGTNQTSAIEDLEELTDLYKQELNL 74
Query: 1212 RLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDS-APDYVLTSLRKLPDWN 1269
R L G S GGM+ LA KLE+ G + + P + LPD +
Sbjct: 75 RP---DRPFVLFGHSMGGMITFRLAQKLEREGIFPQAVIISAIQPPHIQRKKVSHLPD-D 130
Query: 1270 AKLNYFLDL--MPEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQ 1327
L++ + L MP + ++ + ++ ++ + + +
Sbjct: 131 QFLDHIIQLGGMPAELVENKEVMSFFLPSFRSDYRALEQFELYDLAQIQSPVHVFNGLDD 190
Query: 1328 ALPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDN 1360
+ G K K + H DG H +L
Sbjct: 191 KKCIRDAEGWKKWA-KDITFHQFDGGHMFLLSQ 222
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A Length = 319 | Back alignment and structure |
|---|
Score = 64.6 bits (157), Expect = 5e-11
Identities = 35/169 (20%), Positives = 60/169 (35%), Gaps = 16/169 (9%)
Query: 1194 PPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTK--CHLYLV 1251
P + D+ + + L+G + G ++A ELA +LE+ + LV
Sbjct: 139 LPADLDTALDAQARAILRAAGDAP--VVLLGHAGGALLAHELAFRLERAHGAPPAGIVLV 196
Query: 1252 DSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDPK 1311
D Y + W+ +L + + + R LA Y R P+
Sbjct: 197 DP---YPPGHQEPIEVWSRQL---GEGLFAGELEPMSDARLLAMGRYARF-----LAGPR 245
Query: 1312 HKAFGGNITLLRPTEQALPTAEDYGL-SKVCKKPVKVHFVDGNHFTVLD 1359
+ L+R +E E+ G P V V G+HFT++
Sbjct: 246 PGRSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADVPGDHFTMMR 294
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* Length = 280 | Back alignment and structure |
|---|
Score = 63.5 bits (154), Expect = 8e-11
Identities = 37/222 (16%), Positives = 62/222 (27%), Gaps = 28/222 (12%)
Query: 1159 TIFMVPGIEGIATVLEPLAKNINAQVLVFQFD--------HTNPPDTIPEMADSLLPHFK 1210
+ P G + + + +V V P DT+ +A+++ +
Sbjct: 53 RLVCFPYAGGTVSAFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTMEPLAEAVADALE 112
Query: 1211 KRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKCHLYLVDS---APDYV------LTS 1261
+ + + L G S G ++A E+A L + G +L S AP S
Sbjct: 113 EHRLTH--DYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLS 170
Query: 1262 LRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAH--AAYKRITSILKYTDPKHKAFGGNI 1319
L + L D A + L A +R Y
Sbjct: 171 DTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRACER------YDWHPRPPLDCPT 224
Query: 1320 TLLRPTEQALPTAEDY-GLSKVCKKPVKVHFVDGNHFTVLDN 1360
T + T E + GNHF +
Sbjct: 225 TAFSAAADPIATPEMVEAWRPYTTGSFLRRHLPGNHFFLNGG 266
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 2e-10
Identities = 39/238 (16%), Positives = 87/238 (36%), Gaps = 30/238 (12%)
Query: 529 EMAWEIPDQWTLEDAATV-PCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLAR 587
+I + + E+ A + P + A+ + ++ G+ +LI G+G +G + A+
Sbjct: 146 VWCHKIGNM-SYENGAMLEP--LSVALAGLQR-AGVRLGDPVLI-CGAGPIGLITMLCAK 200
Query: 588 YMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLN-S 645
A + T + +F ++ P + + + +++ G + L +
Sbjct: 201 AAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECT 260
Query: 646 LAEEKLQASVRCLAQGGRFLEIG------KFDLANNNMLGMEVFMRETSFHGVMLDNFFF 699
E + A++ + GG+ IG + M +RE + +
Sbjct: 261 GVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPF-------MRASVREVDLQFQ----YRY 309
Query: 700 AEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGK-HIGKVIIKIRD 756
W +++ +D + LV FP + +AF + K KV I+ +
Sbjct: 310 CN-TWPRAIRLVENGLVD---LTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE 363
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 3e-10
Identities = 38/185 (20%), Positives = 67/185 (36%), Gaps = 14/185 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+K I GG G G +A+ + G V+ SRS + K+ + + L
Sbjct: 26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRV--LTAARKLAGATGRRCLPL 82
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
+ D+ V+ + +A + G +D + N A + F + + T
Sbjct: 83 SMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFN 142
Query: 899 FDK--YSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVE 956
+ Y + G V ++ RG A Q + G A + ++ + LAVE
Sbjct: 143 VSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRH--------LAVE 194
Query: 957 WGAVG 961
WG
Sbjct: 195 WGPQN 199
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 4e-10
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 9/105 (8%)
Query: 839 STDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNA--------SL 889
++ L+ A G +D + N A +++D + N + E+F+A
Sbjct: 91 DGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHF 150
Query: 890 GPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934
+A Y+ S+ G+ + SS + +G+ GQ NY A
Sbjct: 151 ATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAA 195
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 6e-10
Identities = 44/212 (20%), Positives = 77/212 (36%), Gaps = 28/212 (13%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRS--GVKNGYQALRIKIWKSYDVQVL 837
+ I+ GG G G + L+ G+ +V+ SR +K+ L+ + + +V+
Sbjct: 17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 838 ISTDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANAT 896
+I E V NL+ + G ++ + N + E+ + + ++A L T
Sbjct: 76 PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGT 135
Query: 897 KYFDKY-SRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPG--- 952
Y K + G +V V G + G A RA G+
Sbjct: 136 FYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAA-----------RA-GVYNLTK 183
Query: 953 -LAVEWGAVG-EVGLVA------DMAEDNLEV 976
LA+EW G + VA A +N
Sbjct: 184 SLALEWACSGIRINCVAPGVIYSQTAVENYGS 215
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Length = 1304 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 5e-09
Identities = 37/248 (14%), Positives = 77/248 (31%), Gaps = 20/248 (8%)
Query: 1117 DVGIQYLM--RTIGDEILANKPVIRLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIATVLE 1174
D+ ++ L TI ++ ++ IF P + G + +
Sbjct: 1020 DLPVKLLFEAPTIAG--IS--AYLKNGGSDGLQDVTIMNQDQEQIIFAFPPVLGYGLMYQ 1075
Query: 1175 PLAKNINAQVLVFQFDHTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALE 1234
L+ + + + FD + D +K G + L G+S G +A E
Sbjct: 1076 NLSSRLPS-YKLCAFDF----IEEEDRLDRYADLIQKLQPEG--PLTLFGYSAGCSLAFE 1128
Query: 1235 LAIKLEQLGTK-CHLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNL 1293
A KLE+ G + +VDS ++ L + + +++ + + +
Sbjct: 1129 AAKKLEEQGRIVQRIIMVDSYKKQGVSDLD-GRTVESDVEALMNVNRD---NEALNSEAV 1184
Query: 1294 AHAAYKRITSILKYTD--PKHKAFGGNITLLRPTEQALPTAEDYGLSKVCKKPVKVHFVD 1351
H ++ + Y +I LL + ++
Sbjct: 1185 KHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIPEWLASWEEATTGVYRMKRGF 1244
Query: 1352 GNHFTVLD 1359
G H +L
Sbjct: 1245 GTHAEMLQ 1252
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 8e-09
Identities = 26/187 (13%), Positives = 54/187 (28%), Gaps = 20/187 (10%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
N + + G G E+A G + R+ L +I ++ +++
Sbjct: 6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRN--GEKLAPLVAEI-EAAGGRIVAR 61
Query: 840 TDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYF 899
+ D E V L A+ P++ + T F + F
Sbjct: 62 SLDARNEDEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVW--EMACWAGF 119
Query: 900 DKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLA 954
R + G+ + + RG +G + A + + ++ +A
Sbjct: 120 -VSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQS--------MA 170
Query: 955 VEWGAVG 961
E
Sbjct: 171 RELMPKN 177
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 8e-09
Identities = 44/234 (18%), Positives = 86/234 (36%), Gaps = 31/234 (13%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE- 592
+P + LE A +P + T + + ++ G+++ + G G VG ++ A ++ A
Sbjct: 136 LPKEIPLEAAVMIPDMMTTGFHGAELAN-IKLGDTVCV-IGIGPVGLMSVAGANHLGAGR 193
Query: 593 IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSL-AEEKL 651
IF + + + + I N ++ + ++K T G+GVD V+ +
Sbjct: 194 IFAVGSRKHCCDIALE---YGATDII-NYKNGDIVEQILKATDGKGVDKVVIAGGDVHTF 249
Query: 652 QASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKA 711
+V+ + G + N N LG + + L
Sbjct: 250 AQAVKMIKPGSD--------IGNVNYLGEGDNI---DIPRSEW-GVGMGHKHIHGGLCPG 297
Query: 712 -------LQKAIDAGAVQP--LVRTIFPE-DKVEEAFRYMA-AGKHIGKVIIKI 754
L + V P LV +F D +E+AF M K + K ++ +
Sbjct: 298 GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVIL 351
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 1e-08
Identities = 38/162 (23%), Positives = 53/162 (32%), Gaps = 10/162 (6%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K ++ G G G A L GAR L+L SR+ K A RI QV I
Sbjct: 6 QGKLAVVTAGSSGLGFASALELARNGAR-LLLFSRNREKLEAAASRIAS-LVSGAQVDIV 63
Query: 840 TDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYF 899
DI + L +A LG D + + F ED++ S + A
Sbjct: 64 AGDIREPGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESY--RLLARSAV 121
Query: 900 DKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNYGMANS 936
R + G+ V SV+ R +
Sbjct: 122 -WVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRL 162
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 4e-08
Identities = 25/155 (16%), Positives = 47/155 (30%), Gaps = 17/155 (10%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
S K+ + G G G A V GA K+ ++ + Y +
Sbjct: 6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQEQYPFATEVM----------- 53
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+ A V + + +D + N A +L+ + + ED+ +
Sbjct: 54 --DVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFN 111
Query: 899 FDKY-SRTMCPT-LGQFVVFSSVSCGRGNAGQTNY 931
+ G V +S + G + Y
Sbjct: 112 LFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAY 146
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 6e-08
Identities = 25/159 (15%), Positives = 45/159 (28%), Gaps = 31/159 (19%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ ++ G G G + + L + + R DV V
Sbjct: 2 NAMKILLIGASGTLGSAVKERLEKKAEV--ITAGRHSG---------------DVTV--- 41
Query: 840 TDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYF 899
DIT + + ++G VD I + + TPE ++ K
Sbjct: 42 --DITNIDSIKKM---YEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQ-IN 95
Query: 900 DKYSRTMCPTL---GQFVVFSSVSCGRGNAGQTNYGMAN 935
+L G F + + + + MAN
Sbjct: 96 --LVLLGIDSLNDKGSFTLTTGIMMEDPIVQGASAAMAN 132
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257 | Back alignment and structure |
|---|
Score = 54.0 bits (131), Expect = 8e-08
Identities = 39/187 (20%), Positives = 70/187 (37%), Gaps = 24/187 (12%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K II GG G G +A GA ++V+T R+ K + +++I + + Q+L
Sbjct: 5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRT--KEKLEEAKLEI-EQFPGQILTV 60
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+ + ++ + K G +D + N A E+ + +N+ + N T Y
Sbjct: 61 QMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFY 120
Query: 899 FDKY-SRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPG--- 952
+ + G + + G + A +A G+
Sbjct: 121 CSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAA-----------KA-GVLAMTK 168
Query: 953 -LAVEWG 958
LAVEWG
Sbjct: 169 TLAVEWG 175
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 1e-07
Identities = 39/198 (19%), Positives = 60/198 (30%), Gaps = 38/198 (19%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
NK+ I+ GG G GL + GA + + RS ++ K + V+
Sbjct: 13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVG--KEFGVKTKAY 69
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D++ V + + LGP+ G+ A V T EDF
Sbjct: 70 QCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFN 129
Query: 899 FDKY-SRTMCP--TLGQFVVFSSVS-------CGRGNAGQTNY--------GMANSIMER 940
+ ++ G VV SS+S G+ Q Y +
Sbjct: 130 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKG---- 185
Query: 941 ICEARRAEGLPGLAVEWG 958
LA EW
Sbjct: 186 ------------LAAEWA 191
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 53.3 bits (129), Expect = 2e-07
Identities = 38/194 (19%), Positives = 61/194 (31%), Gaps = 31/194 (15%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K +I G G G ++A GAR LVL+ R + A R + + + V
Sbjct: 19 DGKRALITGATKGIGADIARAFAAAGAR-LVLSGRDV--SELDAARRALGEQFGTDVHTV 75
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASL-----GPKA 893
D+ L A G +D + N A + + P+ F+A++ P A
Sbjct: 76 AIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAP-A 134
Query: 894 NATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLP 951
+ M G + +S + Y + + GL
Sbjct: 135 LLASAV---GKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKA------------GLV 179
Query: 952 GL----AVEWGAVG 961
A E G G
Sbjct: 180 MATKVLARELGPHG 193
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263 | Back alignment and structure |
|---|
Score = 52.9 bits (128), Expect = 2e-07
Identities = 30/161 (18%), Positives = 58/161 (36%), Gaps = 12/161 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
S K +I G G GL +A+ GA +VL +R + + + + V+VL
Sbjct: 6 SGKVAVITGSSSGIGLAIAEGFAKEGAH-IVLVARQVDR--LHEAARSLKEKFGVRVLEV 62
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+ T GV ++ + G D + N A + E + +
Sbjct: 63 AVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYW--ELLVMAA 120
Query: 899 FDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNYGMA 934
+ +R + P + G + +S+ + + Y +
Sbjct: 121 V-RLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVT 160
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 3e-07
Identities = 33/246 (13%), Positives = 68/246 (27%), Gaps = 44/246 (17%)
Query: 529 EMAWEIPDQWTLEDAATV-P---CVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAIN 584
+ IP E + P A S + G+G +G +
Sbjct: 133 KYLVRIPRS-QAELGFLIEPISITEKALEHAYASRSAFDWDPSSAFV-LGNGSLGLLTLA 190
Query: 585 LARYMDA---EIFTTVGT---PEKREFIRKTFPFIKEENIG----NSRDTSFEQLVMKRT 634
+ + D ++ + I + + +SR T E +
Sbjct: 191 MLKVDDKGYENLYCLGRRDRPDPTIDIIEE---------LDATYVDSRQTPVEDV---PD 238
Query: 635 KGRGVDLVLN-SLAEEKLQASVRCLAQGGRFLEIG----KFDLANNNMLGMEVFMRETSF 689
+D + + + SV+ LA G +G + E+ + +
Sbjct: 239 VYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKAL 298
Query: 690 HGVMLDNFFFAEQEWKMSLQKALQ-KAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIG 748
G + ++ + + ++ LV + P + E AF I
Sbjct: 299 VGS----VNSHVEHFEAATVTFTKLPKWF---LEDLVTGVHPLSEFEAAFD--DDDTTI- 348
Query: 749 KVIIKI 754
K I+
Sbjct: 349 KTAIEF 354
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 4e-07
Identities = 37/190 (19%), Positives = 61/190 (32%), Gaps = 23/190 (12%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K I GG G G + L GA + V+ SR +A +I +V
Sbjct: 25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDV--LKATAEQISSQTGNKVHAI 81
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+ V N ++E G + + N A + E +P + N T +
Sbjct: 82 QCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAF 141
Query: 899 FDK--YSRTMCPTLGQFVVF-SSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPG--- 952
+ + G + +++ G+ A +A G+
Sbjct: 142 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASA-----------KA-GVEAMSK 189
Query: 953 -LAVEWGAVG 961
LA EWG G
Sbjct: 190 SLAAEWGKYG 199
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 5e-07
Identities = 48/242 (19%), Positives = 90/242 (37%), Gaps = 54/242 (22%)
Query: 534 IPDQWTLEDAATVPC----VYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYM 589
IPD + E+AA + C Y + GE + I+ G GG+G A+ A+ M
Sbjct: 134 IPDNLSFEEAAPIFCAGVTTYKALKVT-----GAKPGEWVAIY-GIGGLGHVAVQYAKAM 187
Query: 590 DAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLN-SLAE 648
+ EK E ++ + + + N + MK G GV + ++++
Sbjct: 188 GLNVVAVDIGDEKLELAKE----LGADLVVNPLKEDAAK-FMKEKVG-GVHAAVVTAVSK 241
Query: 649 EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVF---MRETSFHGV----------MLD 695
Q++ + +GG + +G + + +F + G L
Sbjct: 242 PAFQSAYNSIRRGGACVLVG----LPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQ 297
Query: 696 NFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIR 755
F AE G V+ ++ P +K+ E F M G+ G+V++ +
Sbjct: 298 --FAAE-----------------GKVKTIIEVQ-PLEKINEVFDRMLKGQINGRVVLTLE 337
Query: 756 DE 757
D+
Sbjct: 338 DK 339
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 6e-07
Identities = 53/244 (21%), Positives = 87/244 (35%), Gaps = 60/244 (24%)
Query: 534 IPDQWTLEDAATVPC----VYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYM 589
IP L A + C VY A + G + I +GG+G A+ A+ M
Sbjct: 139 IPQGTDLAQVAPILCAGITVYKALKSA-----NLMAGHWVAISGAAGGLGSLAVQYAKAM 193
Query: 590 DAEIFTTVGTPEKREFIRK-----TFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLN 644
+ G K E R F KE++I V+K T G G V+N
Sbjct: 194 GYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDI--------VGAVLKATDG-GAHGVIN 244
Query: 645 -SLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVF---MRETSFHGV-------- 692
S++E ++AS R + G + +G + +VF ++ S G
Sbjct: 245 VSVSEAAIEASTRYVRANGTTVLVG---MPAGAKCCSDVFNQVVKSISIVGSYVGNRADT 301
Query: 693 --MLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKV 750
LD FFA G V+ ++ + + E + M G+ +G+
Sbjct: 302 REALD--FFAR-----------------GLVKSPIKVV-GLSTLPEIYEKMEKGQIVGRY 341
Query: 751 IIKI 754
++
Sbjct: 342 VVDT 345
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 1e-06
Identities = 56/323 (17%), Positives = 108/323 (33%), Gaps = 60/323 (18%)
Query: 462 QIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDS-------GKRV--- 511
+++SS+N++D + T K ++I R + + G +++G + S G+ V
Sbjct: 33 DVHWSSLNYKDALAITGK--GKII---RHFPM-IPGIDFAGTVHASEDPRFHAGQEVLLT 86
Query: 512 ---MGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATA---VYAMFICGQMQK 565
+G LA + +P + +A + TA V A+ G +
Sbjct: 87 GWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQ 146
Query: 566 GESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTS 625
+++ SGGVG A+ L + ++ G +++ G +R S
Sbjct: 147 DGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSL---------GANRILS 197
Query: 626 FEQLVMKR--TKGR---GVDLV-----LNSLAEEKLQASVRC--LAQGGRF-LEIGKFDL 672
++ R K +D V LA+ V LA G + F L
Sbjct: 198 RDEFAESRPLEKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFIL 257
Query: 673 ANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPED 732
N + G++ M + L K + I D
Sbjct: 258 RNVRLQGVDSVM---------------TPPARRAEAWARLVKDLPESFYAQAATEITLAD 302
Query: 733 KVEEAFRYMAAGKHIGKVIIKIR 755
+ + + G+ ++KI+
Sbjct: 303 -APKFADAIINNQVQGRTLVKIK 324
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 1e-06
Identities = 48/239 (20%), Positives = 81/239 (33%), Gaps = 54/239 (22%)
Query: 534 IPDQWTLEDAATVPC----VYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYM 589
+PD+ + A + C VY + G+ ++I G GG+G A+ AR M
Sbjct: 136 LPDKVGFVEIAPILCAGVTVYKGLKVT-----DTRPGQWVVIS-GIGGLGHVAVQYARAM 189
Query: 590 DAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLN-SLAE 648
+ K R+ + E N+RDT + K G VL +++
Sbjct: 190 GLRVAAVDIDDAKLNLARR----LGAEVAVNARDTDPAAWLQKEIG--GAHGVLVTAVSP 243
Query: 649 EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVF---MRETSFHGV----------MLD 695
+ ++ + +GG G G +F ++ + G LD
Sbjct: 244 KAFSQAIGMVRRGGTIALNG----LPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLD 299
Query: 696 NFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754
F A G V+ V T D V + F + GK G+V++
Sbjct: 300 --FAAH-----------------GDVKATVSTA-KLDDVNDVFGRLREGKVEGRVVLDF 338
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 2e-06
Identities = 32/175 (18%), Positives = 52/175 (29%), Gaps = 17/175 (9%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
S I+ G G G L LV RG + + + R Q L+ + V+
Sbjct: 2 SLGHIIVTGAGSGLGRALTIGLVERGHQ-VSMMGRRY-----QRLQ-QQELLLGNAVIGI 54
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASL-----GPKA 893
D+ V A G + + + A + T E +
Sbjct: 55 VADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVST-I 113
Query: 894 NATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAE 948
+ R + G S + G A ++ Y + M E+ RAE
Sbjct: 114 LVAQQT---VRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAE 165
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 2e-06
Identities = 26/188 (13%), Positives = 54/188 (28%), Gaps = 34/188 (18%)
Query: 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIST 840
+K+ ++ GG G G E+ + + + N + I
Sbjct: 22 SKNILVLGGSGALGAEVVKFFKSKSWN-TISIDFRENPNADHSFTI-------------- 66
Query: 841 DDITTEAGVVNLLTEA-NKLGPVDGIFNLA-VVLKDALFENQTPEDFNA----SLGPKAN 894
+ E + +++ + +K VD A ++ + +L
Sbjct: 67 -KDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFA 125
Query: 895 ATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLA 954
+ K G FV+ + + +G YG + I + LA
Sbjct: 126 SAHIGAKLLNQG----GLFVLTGASAALNRTSGMIAYGATKAATHHIIKD--------LA 173
Query: 955 VEWGAVGE 962
E G +
Sbjct: 174 SENGGLPA 181
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 2e-06
Identities = 33/189 (17%), Positives = 60/189 (31%), Gaps = 21/189 (11%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
S ++ GG G GL + L+ GA + +R G + ++ + ++ S
Sbjct: 7 SEAVAVVTGGSSGIGLATVELLLEAGAA-VAFCARDGERLRAAESALRQ-RFPGARLFAS 64
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+ V LG + N A + + F T E ++ L K + +
Sbjct: 65 VCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIH 124
Query: 899 FDKY-SRTMCPT-LGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGL--- 953
+ + V +S+ + A RA G+ L
Sbjct: 125 PVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATS-----------AARA-GVKNLVRS 172
Query: 954 -AVEWGAVG 961
A E+ G
Sbjct: 173 MAFEFAPKG 181
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 2e-06
Identities = 33/154 (21%), Positives = 56/154 (36%), Gaps = 11/154 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
S K+ ++ G G G D GA LV R + L + + + + +
Sbjct: 5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREE-----RLLA-EAVAALEAEAIAV 57
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D++ V + EA + G + G+ + A V AL N E + L +
Sbjct: 58 VADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFL 117
Query: 899 FDKY-SRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931
+ + G V+ SV+ G G G +Y
Sbjct: 118 VARKAGEVLEEG-GSLVLTGSVA-GLGAFGLAHY 149
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 3e-06
Identities = 31/167 (18%), Positives = 57/167 (34%), Gaps = 26/167 (15%)
Query: 781 NKSYIICGGLGGFGLELADWLVLRGARK------LVLTSRSGVKNGYQALRIKIWKSYDV 834
+I G G G +A LVL+SR+ + + ++ ++
Sbjct: 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT--AADLEKISLEC-RAEGA 58
Query: 835 QVLISTDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASL---- 889
T DI+ A V L T + G +D + N A V + + T EDF+ ++
Sbjct: 59 LTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNL 118
Query: 890 -----GPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931
+A ++ G +SV+ + + Y
Sbjct: 119 KGTFFLTQA-LFALMERQHS------GHIFFITSVAATKAFRHSSIY 158
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 3e-06
Identities = 40/323 (12%), Positives = 88/323 (27%), Gaps = 73/323 (22%)
Query: 489 RLYQHCVIGFEYSGRLRDSGK------RVMGLT-----------SGRSLANCCET----- 526
+ V+G E G + +S VM + GR + CET
Sbjct: 57 KGKDFLVLGHEAIGVVEESYHGFSQGDLVMPVNRRGCGICRNCLVGRP--DFCETGEFGE 114
Query: 527 ----------------DVEMAWEIPDQWTLEDAATVPCVYATAVYAM------------- 557
D + +IP ++ED + A ++
Sbjct: 115 AGIHKMDGFMREWWYDDPKYLVKIPK--SIEDIGILAQPLADIEKSIEEILEVQKRVPVW 172
Query: 558 FICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEEN 617
+L+ G+G +G L R E++ I+E
Sbjct: 173 TCDDGTLNCRKVLV-VGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV----IEETK 227
Query: 618 IGNSRDTSFEQLVMKRTKGRGVDLVLNS--LAEEKLQASVRCLAQGGRFLEIG---KFDL 672
++ + D+++++ L + L + G G +
Sbjct: 228 TNYYNSSNGYDKLKDSV--GKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSV 285
Query: 673 ANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAI-DAGAVQPLVRTIFPE 731
+ E+ + G+ + ++ ++ A + L+
Sbjct: 286 PLDYKTLQEIVHTNKTIIGL----VNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSI 341
Query: 732 DKVEEAFRYMAAGKHIG-KVIIK 753
+ +E + + +H K+ I
Sbjct: 342 NDEKELLKVLREKEHGEIKIRIL 364
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 3e-06
Identities = 26/153 (16%), Positives = 50/153 (32%), Gaps = 8/153 (5%)
Query: 785 IICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDIT 844
++ G G G + D L V+ + + + L+ + Y + DIT
Sbjct: 6 LVTGVSRGIGKSIVDVLFSLDK-DTVVYGVARSEAPLKKLK----EKYGDRFFYVVGDIT 60
Query: 845 TEAGVVNLLTEA-NKLGPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKY 902
++ + L+ A G +D + A VL+ + +
Sbjct: 61 EDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGI 120
Query: 903 S-RTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934
+ + T G V SS +C + YG +
Sbjct: 121 ALPELKKTNGNVVFVSSDACNMYFSSWGAYGSS 153
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 3e-06
Identities = 32/179 (17%), Positives = 53/179 (29%), Gaps = 21/179 (11%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K I+ G G G E+A L GA +V+T+RS K Q + +
Sbjct: 27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARS--KETLQKVVSHCLELGAASAHYI 83
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNAS-----LGPKA 893
+ + +A +G +D + + + S L
Sbjct: 84 AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSY-V 142
Query: 894 NATKYFDKYSRTMCPTL----GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAE 948
T P L G VV SS++ Y + ++ + R E
Sbjct: 143 VLTVAA-------LPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 194
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 4e-06
Identities = 32/157 (20%), Positives = 58/157 (36%), Gaps = 8/157 (5%)
Query: 780 SNKSYIICGGLG-GFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLI 838
K ++ G G G A +L GA +V++ + R ++ +V
Sbjct: 21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYH--ERRLGETRDQLADLGLGRVEA 77
Query: 839 STDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATK 897
D+T+ V L+T+ K G +D + N A + + T E+++ L +
Sbjct: 78 VVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVM 137
Query: 898 YFDKY-SRTM--CPTLGQFVVFSSVSCGRGNAGQTNY 931
+ R G V +SV R Q++Y
Sbjct: 138 RATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHY 174
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 5e-06
Identities = 35/247 (14%), Positives = 69/247 (27%), Gaps = 36/247 (14%)
Query: 533 EIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE 592
+ D + + T + G + G ++ + AG+G VG AA AR + A
Sbjct: 154 RDKAMEKIRDLTCLSDILPTGYHGAVTAG-VGPGSTVYV-AGAGPVGLAAAASARLLGAA 211
Query: 593 -IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVL-------- 643
+ P + + E S DT + + VD +
Sbjct: 212 VVIVGDLNPARLAHAKA----QGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEAR 267
Query: 644 --------NSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLD 695
+ L + ++ G+ G + + + + S
Sbjct: 268 GHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIR---FG 324
Query: 696 NFFFAEQEWKM------SLQKALQKAIDAGAVQP--LVRT-IFPEDKVEEAFRYMAAGKH 746
+ + +AL +AI + +V + D + AG
Sbjct: 325 LGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVP 384
Query: 747 IGKVIIK 753
K +I
Sbjct: 385 K-KFVID 390
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 7e-06
Identities = 37/159 (23%), Positives = 61/159 (38%), Gaps = 14/159 (8%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K I+ GG G GL LV GA ++LT R+ ++ +R + +V
Sbjct: 7 QGKKAIVIGGTHGMGLATVRRLVEGGAE-VLLTGRN--ESNIARIREEF----GPRVHAL 59
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
DI + L A LG +D + A V + F+ + ++ N
Sbjct: 60 RSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFA--VNTKGA 117
Query: 899 FDKYSRTMCPTL---GQFVVFSSVSCGRGNAGQTNYGMA 934
F + + P + G V SSV+ G+ G + Y +
Sbjct: 118 F-FTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSAS 155
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 8e-06
Identities = 29/166 (17%), Positives = 58/166 (34%), Gaps = 25/166 (15%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K+ ++ G G G +A LV GA +++ R I+ + D +
Sbjct: 9 KGKTALVTGSTAGIGKAIATSLVAEGAN-VLINGRREENVNETIKEIRA-QYPDAILQPV 66
Query: 840 TDDITTEAGVVNLLTEANKLGPVD------GIFNLAVVLKDALFENQTPEDFNASLGPKA 893
D+ TE G +++ K VD GIF + + + ED+ +
Sbjct: 67 VADLGTEQGCQDVI---EKYPKVDILINNLGIF------EPVEYFDIPDEDWFKLF--EV 115
Query: 894 NATKYFDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNYGMA 934
N + +R+ + G+ + +S + + +Y
Sbjct: 116 NIMSGV-RLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSAT 160
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 9e-06
Identities = 37/160 (23%), Positives = 59/160 (36%), Gaps = 13/160 (8%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+S ++ GG G G +A GA + + RS A + + +V+
Sbjct: 9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRS--TADIDACVADLDQLGSGKVIGV 65
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D++ A L A + G +D + A V DA TPE N N
Sbjct: 66 QTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIF--AVNVNGT 123
Query: 899 FDKYSRTMCPTL-----GQFVVFSSVS-CGRGNAGQTNYG 932
F + L G+ V+ SS++ G G ++YG
Sbjct: 124 F-YAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYG 162
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 1e-05
Identities = 30/171 (17%), Positives = 61/171 (35%), Gaps = 19/171 (11%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGAR--KLVLTSRSGVKNGYQALRIKIWKSY-DVQV 836
++ G GFG LA L + +++++RS ++ + L+ ++ D++V
Sbjct: 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARS--ESMLRQLKEELGAQQPDLKV 62
Query: 837 LISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVV--------LKDALFENQTPEDFNAS 888
+++ D+ TEAGV LL+ +L +G+ L ++ + + N
Sbjct: 63 VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122
Query: 889 L-----GPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934
T + V SS+ + G Y
Sbjct: 123 WALNLTSM-LCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAG 172
|
| >2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus} Length = 89 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 1e-05
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 1012 KKAGSGGATNIVDAVINI----LGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEV 1067
G G + +DAV+ + G+ L+ ++ S A++G+DS+ ++ I + +
Sbjct: 2 MAKGVGVSNEKLDAVMRVVSEESGI-ALEELTDDSNFADMGIDSLSSMVIGSRFREDLGL 60
Query: 1068 FLTPQD 1073
L P+
Sbjct: 61 DLGPEF 66
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 1e-05
Identities = 36/161 (22%), Positives = 53/161 (32%), Gaps = 24/161 (14%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K ++ G GG G + L GAR + + R+ V L +
Sbjct: 27 EGKVALVTGAAGGIGGAVVTALRAAGAR-VAVADRA-VAGIAADLHLPG----------- 73
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+ A L LG +D + N A V+ T D++ SLG N
Sbjct: 74 --DLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLG--VNVEAP 129
Query: 899 FDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNYGMA 934
F + R P + G V +S R G Y +
Sbjct: 130 F-RICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLT 169
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 1e-05
Identities = 39/190 (20%), Positives = 69/190 (36%), Gaps = 21/190 (11%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+++Y++ GG G G +A LV GA +++ R+ K ++ + +
Sbjct: 10 QDRTYLVTGGGSGIGKGVAAGLVAAGAS-VMIVGRNPDKLAGAVQELEALGANGGAIRYE 68
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATK 897
DIT E + G + G+ + A ++ E + ++ N T
Sbjct: 69 PTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTM 128
Query: 898 YFDKY-SRTMCPT-LGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGL-- 953
Y K+ +R M G FV SS++ + YG+ S + L
Sbjct: 129 YVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKS------------AVDHLMQ 176
Query: 954 --AVEWGAVG 961
A E GA
Sbjct: 177 LAADELGASW 186
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 2e-05
Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 18/105 (17%)
Query: 839 STDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLG-------- 890
+++ +V T G V I N A +L+DA + T +D+ +
Sbjct: 71 DYNNVLDGDKIVE--TAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFA 128
Query: 891 -PKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934
KA A YF K G+ V SS + GN GQ NY A
Sbjct: 129 VTKA-AWPYFQKQKY------GRIVNTSSPAGLYGNFGQANYASA 166
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 2e-05
Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 19/106 (17%)
Query: 839 STDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGP------ 891
D+ ++ ++ +K G +D + N A +L+D F + +++++
Sbjct: 374 DQHDVAKDSE--AIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTF 431
Query: 892 ---KANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934
+ A YF + G+ + +S S GN GQ NY +
Sbjct: 432 NLSRL-AWPYFVEKQF------GRIINITSTSGIYGNFGQANYSSS 470
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 2e-05
Identities = 32/155 (20%), Positives = 52/155 (33%), Gaps = 16/155 (10%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K +I G G G L R ++V TSRS S D +
Sbjct: 27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKP------------SADPDIHTV 73
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
DI+ ++ E + G +D + N A V F T ED++ +LG +
Sbjct: 74 AGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFH 133
Query: 899 FDKY-SRTMCPT-LGQFVVFSSVSCGRGNAGQTNY 931
+ + M G V ++ + G +
Sbjct: 134 ITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSA 168
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 3e-05
Identities = 28/155 (18%), Positives = 48/155 (30%), Gaps = 14/155 (9%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ +Y++ GG G G + + L+ ++ + IK
Sbjct: 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKA----------- 51
Query: 840 TDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYF 899
D+T + + N+L K DGIF A +L + E L ++ YF
Sbjct: 52 --DLTKQQDITNVLDII-KNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYF 108
Query: 900 DKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934
K V S C Y ++
Sbjct: 109 IKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLS 143
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 3e-05
Identities = 38/166 (22%), Positives = 61/166 (36%), Gaps = 16/166 (9%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
SNK+ II G G G A GA + +T RS + I + QV
Sbjct: 5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSV 63
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALF----ENQTPEDFNASL----- 889
D+TTE G ++ + G +D + N A F +Q + ++ +L
Sbjct: 64 VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 123
Query: 890 GPKANATKYFDKYSRTMCPTLGQFVVFSSVSCG-RGNAGQTNYGMA 934
TK + + + G+ V SS+ G + Y +A
Sbjct: 124 AV-IEMTKKVKPH---LVASKGEIVNVSSIVAGPQAQPDFLYYAIA 165
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 3e-05
Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 13/159 (8%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K ++ G G GL +A L +GA +VL G + +R + + V+VL
Sbjct: 3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGF-GDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASL-----GPKA 893
D++ V L+ A ++G +D + N A + AL E+ E ++A L
Sbjct: 61 GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAV-F 119
Query: 894 NATKYFDKYSRTMCPT-LGQFVVFSSVSCGRGNAGQTNY 931
+ T M G+ + +S +A ++ Y
Sbjct: 120 HGTAAA---LPHMKKQGFGRIINIASAHGLVASANKSAY 155
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 4e-05
Identities = 38/162 (23%), Positives = 61/162 (37%), Gaps = 19/162 (11%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K +I G G G +A A K+V+ RS ++ +I K + +
Sbjct: 6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEA-NSVLEEI-KKVGGEAIAV 62
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFN---------ASL 889
D+T E+ V+NL+ A + G +D + N A + + D+N A L
Sbjct: 63 KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFL 122
Query: 890 GPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931
G + A KYF + G + SSV +Y
Sbjct: 123 GSRE-AIKYFVENDIK-----GTVINMSSVHEKIPWPLFVHY 158
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 4e-05
Identities = 28/159 (17%), Positives = 58/159 (36%), Gaps = 13/159 (8%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K+ +I G G GL +A L GA +VL G + + + ++ VL
Sbjct: 24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGF-GAPDEIRTVTDEVAGLSSGTVLHH 81
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASL-----GPKA 893
D+T + + +++ ++ G D + N A V E+ E ++ +
Sbjct: 82 PADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSS-F 140
Query: 894 NATKYFDKYSRTMCPT-LGQFVVFSSVSCGRGNAGQTNY 931
+ + M G+ + +S + ++ Y
Sbjct: 141 HTIRGA---IPPMKKKGWGRIINIASAHGLVASPFKSAY 176
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 5e-05
Identities = 37/193 (19%), Positives = 66/193 (34%), Gaps = 31/193 (16%)
Query: 788 GGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEA 847
G G G+E A GA + +T S + + ++ ++ K+Y ++ + +
Sbjct: 29 SGPKGMGIEAARGCAEMGA-AVAITYASRAQGAEENVK-ELEKTYGIKAKAYKCQVDSYE 86
Query: 848 GVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKY-SRT 905
L+ + G +D A D+ + + E +N + N T + K
Sbjct: 87 SCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHH 146
Query: 906 MCPT-LGQFVVFSSVSCGRGN--AGQTNY--------GMANSIMERICEARRAEGLPGLA 954
G V+ +S+S N QT+Y MA S LA
Sbjct: 147 FKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARS----------------LA 190
Query: 955 VEWGAVGEVGLVA 967
EW V ++
Sbjct: 191 NEWRDFARVNSIS 203
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 5e-05
Identities = 38/163 (23%), Positives = 60/163 (36%), Gaps = 21/163 (12%)
Query: 785 IICGGLGGFGLELADWLVLRGARKLV-----LTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
++ G G G E A RGA+ +V S G + + + + +
Sbjct: 23 VVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVAD 82
Query: 840 TDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNA--------SLGP 891
+ + A V+ T G VD + N A +L+D + +D+N S
Sbjct: 83 YNSVIDGAKVIE--TAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKC 140
Query: 892 KANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934
A Y K + G+ ++ SS S GN GQ NY A
Sbjct: 141 TQAAFPYMKKQNY------GRIIMTSSNSGIYGNFGQVNYTAA 177
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 5e-05
Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 22/163 (13%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
S + ++ G G G +A L GA ++VLT+R +A+ +I + +
Sbjct: 28 SGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARD--VEKLRAVEREI-VAAGGEAESH 83
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLA-VVLKDALFENQTPEDFNASL-------- 889
D++ + T G D + N A V P +++A +
Sbjct: 84 ACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPY 143
Query: 890 -GPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931
+A ++ G + SS++ A Y
Sbjct: 144 LLLRA-FAPAMIA-AKR-----GHIINISSLAGKNPVADGAAY 179
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 5e-05
Identities = 30/160 (18%), Positives = 61/160 (38%), Gaps = 13/160 (8%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
S +S ++ GG G G +A GA + + +RS ++ ++ + V+
Sbjct: 40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARS--PRELSSVTAELGELGAGNVIGV 96
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D++ + + G +D + A + +A + TPE + L N
Sbjct: 97 RLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVL--DVNVKGT 154
Query: 899 FDKYSRTMCPTL-----GQFVVFSSVS-CGRGNAGQTNYG 932
+ L G+ ++ SS++ G G ++YG
Sbjct: 155 V-YTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYG 193
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 6e-05
Identities = 28/158 (17%), Positives = 55/158 (34%), Gaps = 15/158 (9%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+K +I GG G G +A+ + GA + + A+R + V+
Sbjct: 6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKC--- 61
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D++ V + + G D + N A + F+ T E + + N
Sbjct: 62 --DVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFE--INVDSG 117
Query: 899 FDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNY 931
F ++ P + G+ + +S + T+Y
Sbjct: 118 F-LMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHY 154
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 6e-05
Identities = 36/189 (19%), Positives = 58/189 (30%), Gaps = 30/189 (15%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
S ++ G G G + L GA+ +V +R+ + +L + V V
Sbjct: 6 SGLRALVTGAGKGIGRDTVKALHASGAK-VVAVTRT--NSDLVSLAKECPGIEPVCV--- 59
Query: 840 TDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYF 899
D+ L +GPVD + N A ++ F T E F+ S +
Sbjct: 60 --DLGDWDATEKAL---GGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQV 114
Query: 900 DKY-SRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGL--- 953
+ +R M G V SS+ Y + L
Sbjct: 115 SQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKG------------AMTMLTKA 162
Query: 954 -AVEWGAVG 961
A+E G
Sbjct: 163 MAMELGPHK 171
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 6e-05
Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 9/157 (5%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
++ ++ G G GLE+A L G R + + +R + G + ++ + V+
Sbjct: 21 DSEVALVTGATSGIGLEIARRLGKEGLR-VFVCARG--EEGLRTTLKEL-REAGVEADGR 76
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNA----SLGPKAN 894
T D+ + + L+ + GPVD + N A E + +L
Sbjct: 77 TCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFR 136
Query: 895 ATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931
TK K + G+ V +S +G Y
Sbjct: 137 VTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPY 173
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 7e-05
Identities = 39/186 (20%), Positives = 60/186 (32%), Gaps = 24/186 (12%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ + ++ G G G L GAR +V SR+ + +L + V V
Sbjct: 6 AGRRVLVTGAGKGIGRGTVQALHATGAR-VVAVSRT--QADLDSLVRECPGIEPVCV--- 59
Query: 840 TDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYF 899
D+ L +GPVD + N A V F T E F+ S A
Sbjct: 60 --DLGDWEATERAL---GSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 900 DKY-SRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLP-GLAV 955
+ +R + G V SS R + Y + + L +A+
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGAL---------DMLTKVMAL 165
Query: 956 EWGAVG 961
E G
Sbjct: 166 ELGPHK 171
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 8e-05
Identities = 32/247 (12%), Positives = 70/247 (28%), Gaps = 36/247 (14%)
Query: 533 EIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE 592
+ ++D + + T + G ++ G + I AG+G VG+ A AR + A
Sbjct: 154 KEQAMEKIKDLTLISDILPTGFHGCVSAG-VKPGSHVYI-AGAGPVGRCAAAGARLLGAA 211
Query: 593 -IFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVL-------- 643
+ PE+ + + E I + + VD +
Sbjct: 212 CVIVGDQNPERLKLLSD----AGFETIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAH 267
Query: 644 -------NSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDN 696
L + + GG G + ++ + + +
Sbjct: 268 GLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRLHLD---FGK 324
Query: 697 FFFAEQEWKM------SLQKALQKAIDAGAVQPLVRTI----FPEDKVEEAFRYMAAGKH 746
+ + + L +AI + L + + D+ + + G
Sbjct: 325 MWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSP 384
Query: 747 IGKVIIK 753
K +I
Sbjct: 385 A-KFVID 390
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 8e-05
Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 7/158 (4%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
++K +I G G LA +GA LVL +R+ + + ++ + L
Sbjct: 10 TDKVVVISGVGPALGTTLARRCAEQGA-DLVLAART--VERLEDVAKQV-TDTGRRALSV 65
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLA-VVLKDALFENQTPEDFNASLGPKANATK 897
DIT +A V +L+ E G VD + N A V F N T E ++
Sbjct: 66 GTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGAL 125
Query: 898 YFDKY-SRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934
+ + + + G V +S+ A Y MA
Sbjct: 126 RLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMA 163
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 8e-05
Identities = 38/165 (23%), Positives = 63/165 (38%), Gaps = 14/165 (8%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ K II G G G A GA K+ +T R + +I + V
Sbjct: 5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSV 63
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFN----LAVVLKDALFENQTPEDFNASLGP--K 892
D+TT+AG +L+ K G +D + N + Q+ E ++A+L +
Sbjct: 64 VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 123
Query: 893 A--NATKYFDKYSRTMCPTLGQFVVFSSVSCG-RGNAGQTNYGMA 934
+ TK + + T G+ V SS++ G Y +A
Sbjct: 124 SVIALTKKAVPH---LSSTKGEIVNISSIASGLHATPDFPYYSIA 165
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 8e-05
Identities = 44/225 (19%), Positives = 87/225 (38%), Gaps = 40/225 (17%)
Query: 552 TAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFP 611
TA + ++GE++ + A SG VGQ LA+ M + + G+ EK + ++ F
Sbjct: 142 TAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFG 201
Query: 612 F---I---KEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFL 665
F +E ++ L KR G+D+ ++ + L A + + GR
Sbjct: 202 FDDAFNYKEESDLT-------AAL--KRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIA 252
Query: 666 EIGKFDLANN-------NMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDA 718
G N N+ + + G ++ +F+ ++ + + I
Sbjct: 253 VCGMISQYNLENQEGVHNL--SNIIYKRNRIQGFVVSDFYDKYSKF----LEFVLPHIRE 306
Query: 719 GAVQPLVRTIFPEDKVE------EAFRYMAAGKHIGKVIIKIRDE 757
G + + ED + EA + GK++GK ++ + E
Sbjct: 307 GKIT------YVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 8e-05
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 16/104 (15%)
Query: 839 STDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNA--------SLG 890
+ D + +V T + G +D + N A +L+D F + ED++ S
Sbjct: 72 NYDSVEAGEKLVK--TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQ 129
Query: 891 PKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934
A + K + G+ ++ +S S GN GQ NY A
Sbjct: 130 VTRAAWDHMKKQNY------GRIIMTASASGIYGNFGQANYSAA 167
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 8e-05
Identities = 32/164 (19%), Positives = 63/164 (38%), Gaps = 18/164 (10%)
Query: 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIST 840
+K ++ GG G G +++ L G + + + I ++ D + +
Sbjct: 2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLI-EAADQKAVFVG 59
Query: 841 DDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNAS---------LG 890
D+T +A + + EA KLG D + N A + + T ED G
Sbjct: 60 LDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFG 119
Query: 891 PKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934
+A A++ FD+ G+ + +S++ +G + Y
Sbjct: 120 IQA-ASRKFDELGVK-----GKIINAASIAAIQGFPILSAYSTT 157
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 9e-05
Identities = 36/164 (21%), Positives = 67/164 (40%), Gaps = 14/164 (8%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS--YDVQVL 837
S KS II G G G A GA ++ +T R+ ++ + + +I K+ ++
Sbjct: 25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRN--EDRLEETKQQILKAGVPAEKIN 81
Query: 838 ISTDDITTEAGVVNLLTEA-NKLGPVDGIFNLA--VVLKDALFENQTPEDFNASLGPKAN 894
D+T +G +++ K G +D + N A + +Q E + + K N
Sbjct: 82 AVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTF--KLN 139
Query: 895 ATKYFD--KY-SRTMCPTLGQFVVFSSVSCG-RGNAGQTNYGMA 934
+ + + T G+ V SS+ G + ++G Y A
Sbjct: 140 FQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACA 183
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 1e-04
Identities = 31/162 (19%), Positives = 49/162 (30%), Gaps = 19/162 (11%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
II G G G +A L G ++VL +RS I + + ++
Sbjct: 6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVL 64
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASL--------- 889
DIT + + K G VD + N A + D ++F +
Sbjct: 65 PLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPV-DNFRKIMEINVIAQYG 123
Query: 890 GPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931
K T+ G +S + G A Y
Sbjct: 124 ILKT-VTEIMKVQKN------GYIFNVASRAAKYGFADGGIY 158
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 1e-04
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 12/158 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K ++ G G G +A+ L G+ +++T S +A+ +I Y V+
Sbjct: 6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTS--GERAKAVAEEIANKYGVKAHGV 62
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
++ +E + E N + +D + N A + +D LF + D+ L K N T
Sbjct: 63 EMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVL--KVNLTGT 120
Query: 899 FDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNY 931
F ++ + G+ V SSV GN GQ NY
Sbjct: 121 F-LVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNY 157
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 1e-04
Identities = 31/159 (19%), Positives = 59/159 (37%), Gaps = 14/159 (8%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
++ I+ G G G +A GA +V+T G +A+ I + + +
Sbjct: 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLK--SEGAEAVAAAI-RQAGGKAIGL 66
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
++T E ++ A ++ G + + N A F+ DF + N
Sbjct: 67 ECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFD-MPMSDFEWAFK--LNLFSL 123
Query: 899 FDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNYG 932
F + S+ P + G + SS++ N +YG
Sbjct: 124 F-RLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYG 161
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 1e-04
Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 9/157 (5%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
++ + G G GL +A L RG + +R A + ++ V S
Sbjct: 23 RPQTAFVTGVSSGIGLAVARTLAARGIA-VYGCARD--AKNVSAAVDGL-RAAGHDVDGS 78
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNA----SLGPKAN 894
+ D+T+ V + A + GP+ + N A + + +L
Sbjct: 79 SCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFR 138
Query: 895 ATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931
T+ + G+ V +S +G Y
Sbjct: 139 VTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPY 175
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 1e-04
Identities = 18/103 (17%), Positives = 30/103 (29%), Gaps = 19/103 (18%)
Query: 842 DITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASL-----GP---- 891
D++ A V L A G VD + N A ++ F+ + G
Sbjct: 85 DVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTL 144
Query: 892 KANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934
+ A + R + S+ G + Y A
Sbjct: 145 RE-AAQRLRVGGR--------IINMSTSQVGLLHPSYGIYAAA 178
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 1e-04
Identities = 46/176 (26%), Positives = 67/176 (38%), Gaps = 40/176 (22%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVK----NGYQALRIKIWKSYDVQ 835
++S ++ GG G GL +A G K+ +T RSG +
Sbjct: 20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEGFLAVKC------------ 66
Query: 836 VLISTDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKAN 894
DIT V E GPV+ + A V KD L + EDF + + + N
Sbjct: 67 ------DITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVV--ETN 118
Query: 895 ATKYFDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNY--------GMANSI 937
T F + + + G+ V+ SSV G+AGQ NY G A S+
Sbjct: 119 LTGTF-RVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSL 173
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 1e-04
Identities = 34/174 (19%), Positives = 49/174 (28%), Gaps = 36/174 (20%)
Query: 785 IICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDIT 844
+I G GG G A L+G L+L+ R L + + L D+
Sbjct: 4 LITGATGGLGGAFA--RALKGHD-LLLSGRRAGA--LAELA----REVGARAL--PADLA 52
Query: 845 TEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASL-----GPKANATKYF 899
E LL EA GP+D + + A + L
Sbjct: 53 DELEAKALLEEA---GPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAF------ 103
Query: 900 DKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAE 948
+ + V F + G Y A +E EA R E
Sbjct: 104 ------VLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKE 151
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 2e-04
Identities = 45/171 (26%), Positives = 65/171 (38%), Gaps = 30/171 (17%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
++S ++ GG G GL +A L G K+ +T R +++
Sbjct: 14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPK-GLFGVEV----------- 60
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+T V T GPV+ + + A + DA T E F + AN T
Sbjct: 61 --DVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVI--NANLTGA 116
Query: 899 FD---KYSRTMCPT-LGQFVVFSSVSCGRGNAGQTNY--------GMANSI 937
F + SR+M G+ + SVS G Q NY GMA SI
Sbjct: 117 FRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSI 167
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 2e-04
Identities = 37/158 (23%), Positives = 59/158 (37%), Gaps = 12/158 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
S + + GG+GG G + L G R V+ K+ S
Sbjct: 12 SQRIAYVTGGMGGIGTSICQRLHKDGFR--VVAGCGPNSPRRVKWLEDQ-KALGFDFYAS 68
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNA----SLGPKAN 894
++ + ++G +D + N A + +D +F T ED+ A +L N
Sbjct: 69 EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFN 128
Query: 895 ATKYFDKYSRTMCPT-LGQFVVFSSVSCGRGNAGQTNY 931
TK M G+ + SSV+ +G GQTNY
Sbjct: 129 VTKQV---IDGMVERGWGRIINISSVNGQKGQFGQTNY 163
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 2e-04
Identities = 35/193 (18%), Positives = 64/193 (33%), Gaps = 30/193 (15%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K+ ++ GG G G + + GA + +R+ + W+ QV S
Sbjct: 13 KAKTVLVTGGTKGIGHAIVEEFAGFGAV-IHTCARN--EYELNECL-SKWQKKGFQVTGS 68
Query: 840 TDDITTEAGVVNLLTEANKL--GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATK 897
D + L+ + + G +D + N ++ + T EDF+ + N
Sbjct: 69 VCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHIS--TNLES 126
Query: 898 YFDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPG 952
+ S+ P L G + SS++ + + Y L
Sbjct: 127 AY-HLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKG------------ALNQ 173
Query: 953 L----AVEWGAVG 961
L A EW + G
Sbjct: 174 LARNLACEWASDG 186
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 2e-04
Identities = 34/158 (21%), Positives = 65/158 (41%), Gaps = 13/158 (8%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ K ++ G G G E+A L +GA +V T+ S + + + K +
Sbjct: 4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATS--QASAEKFENSM-KEKGFKARGL 59
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
+I+ + N E + +D + N A + +D L + +++ + + N +
Sbjct: 60 VLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVI--NTNLSSI 117
Query: 899 FDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNY 931
F + S+ + G+ + SV GN GQTNY
Sbjct: 118 F-RMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNY 154
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 2e-04
Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 11/156 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
S + I+ GG G G +A L GA + + + ++ + V+V
Sbjct: 11 SGRKAIVTGGSKGIGAAIARALDKAGAT-VAIADLDVMAAQAVVAGLEN-GGFAVEV--- 65
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+T A V + +A + LG D + A V + T E+++ + A
Sbjct: 66 --DVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFL 123
Query: 899 FDKY-SRTMCP--TLGQFVVFSSVSCGRGNAGQTNY 931
++ R T G V +S++ G +Y
Sbjct: 124 ANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHY 159
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 2e-04
Identities = 33/157 (21%), Positives = 68/157 (43%), Gaps = 13/157 (8%)
Query: 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIST 840
NK ++ G G G E+A L + ++ SR+ + ++ +I KS+ +
Sbjct: 44 NKVALVTGAGRGIGREIAKMLAKSVS-HVICISRT--QKSCDSVVDEI-KSFGYESSGYA 99
Query: 841 DDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYF 899
D++ + + ++ + + VD + N A + +D LF +++ L + N F
Sbjct: 100 GDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVL--RTNLNSLF 157
Query: 900 DKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNY 931
++ + + G+ + SS+ GN GQ NY
Sbjct: 158 -YITQPISKRMINNRYGRIINISSIVGLTGNVGQANY 193
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 2e-04
Identities = 32/191 (16%), Positives = 59/191 (30%), Gaps = 34/191 (17%)
Query: 785 IICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDIT 844
+I G G G ++A GA ++ + +R A I + L D+T
Sbjct: 36 LITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIA---GVGGKALPIRCDVT 91
Query: 845 TEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKY- 902
V +L + +LG +D A ++ + E+F +
Sbjct: 92 QPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAA 151
Query: 903 SRTMCP--TLGQFVVFSSVSCGRGNAGQ--TNY--------GMANSIMERICEARRAEGL 950
+R M G + +S+S N Q ++Y + +
Sbjct: 152 ARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKA-------------- 197
Query: 951 PGLAVEWGAVG 961
+AVE
Sbjct: 198 --MAVELAPHQ 206
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 2e-04
Identities = 31/158 (19%), Positives = 65/158 (41%), Gaps = 16/158 (10%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ + ++ G GG G +A +GA + L ++ + + V +
Sbjct: 26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTR--EDKLKEIA----ADLGKDVFVF 78
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
+ +++ + L A ++ +D + N A + +D LF +D++ L N T
Sbjct: 79 SANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVL--AVNLTAA 136
Query: 899 FDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNY 931
+R + ++ G+ + +S+ GN GQTNY
Sbjct: 137 S-TLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNY 173
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 2e-04
Identities = 34/199 (17%), Positives = 59/199 (29%), Gaps = 35/199 (17%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K + G GG G +A+ GA + + S + + K+Y V
Sbjct: 33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAE---HLQKTYGVHSKAY 88
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLA--VVLKDALFENQTPEDFNASLGPKANAT 896
+I+ V +++ G +D A + + + +N + N
Sbjct: 89 KCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGV 148
Query: 897 KYFDKY-SRTMCPT-LGQFVVFSSVSCGRGNAG--QTNY--------GMANSIMERICEA 944
Y + G ++ SS+S N Q Y +A S
Sbjct: 149 YYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKS-------- 200
Query: 945 RRAEGLPGLAVEWGAVGEV 963
LA+EW V
Sbjct: 201 --------LAIEWAPFARV 211
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 3e-04
Identities = 34/161 (21%), Positives = 52/161 (32%), Gaps = 20/161 (12%)
Query: 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIST 840
K ++ G G G +A LV G + + + A I +
Sbjct: 2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEIN---QAGGHAVAVK 57
Query: 841 DDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNAS---------LG 890
D++ V + +A LG D I N A V E+ TPE + G
Sbjct: 58 VDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWG 117
Query: 891 PKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931
+A A + F K G+ + S + GN Y
Sbjct: 118 IQA-AVEAFKKEGHG-----GKIINACSQAGHVGNPELAVY 152
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244 | Back alignment and structure |
|---|
Score = 43.2 bits (103), Expect = 3e-04
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 785 IICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDIT 844
++ G G G +A L G + LV +RS + + +I ++Y Q + D++
Sbjct: 5 VVTGASRGIGKAIALSLGKAGCKVLVNYARS--AKAAEEVSKQI-EAYGGQAITFGGDVS 61
Query: 845 TEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYS 903
EA V ++ A + G +D + N A + +D L ++ + N T F +
Sbjct: 62 KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVI--DLNLTGVF-LCT 118
Query: 904 RTMCPTL-----GQFVVFSSVSCGRGNAGQTNY 931
+ + G+ + +SV GN GQ NY
Sbjct: 119 QAATKIMMKKRKGRIINIASVVGLIGNIGQANY 151
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 3e-04
Identities = 26/163 (15%), Positives = 53/163 (32%), Gaps = 25/163 (15%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVL-TSRSGVKNGYQALRIKIWKSYDVQVLI 838
+ K+ ++ G G G +A L GA +V + G K ++ +
Sbjct: 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI--------GKKARA 56
Query: 839 STDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLG------- 890
DI+ V L E G +D + N A ++ +++ + + +
Sbjct: 57 IAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTF 116
Query: 891 --PKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931
+A T + G+ + +S + G Y
Sbjct: 117 IVTRA-GTDQMRAAGKA-----GRVISIASNTFFAGTPNMAAY 153
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 3e-04
Identities = 30/163 (18%), Positives = 68/163 (41%), Gaps = 22/163 (13%)
Query: 462 QIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDS-------GKRV--- 511
++ YS IN++D + A ++ R Y ++G + +G + S G V
Sbjct: 37 KVAYSGINYKDGLAGKAG--GNIV---REYPL-ILGIDAAGTVVSSNDPRFAEGDEVIAT 90
Query: 512 ---MGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFI---CGQMQK 565
+G++ L+ + +P +L++A TA ++ G +
Sbjct: 91 SYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPE 150
Query: 566 GESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRK 608
S+L+ +GGVG A+++ ++ + G E +++++
Sbjct: 151 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ 193
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 3e-04
Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 12/158 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+++ ++ G G G +A L GA+ V + S + I + +
Sbjct: 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASS--AGAADEVVAAI-AAAGGEAFAV 83
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D++ E+ V L + G +D + N A + +D L +D+ + L N
Sbjct: 84 KADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVL--DLNLGGV 141
Query: 899 FDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNY 931
F SR + G+ + +SV GN GQ NY
Sbjct: 142 F-LCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANY 178
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 3e-04
Identities = 30/163 (18%), Positives = 68/163 (41%), Gaps = 22/163 (13%)
Query: 462 QIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDS-------GKRV--- 511
+++YSS+N++D + + +++ + Y V G + +G + S G V
Sbjct: 36 RVHYSSVNYKDGLASIPD--GKIV---KTYPF-VPGIDLAGVVVSSQHPRFREGDEVIAT 89
Query: 512 ---MGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATA---VYAMFICGQMQK 565
+G+T + E +P TL++A + TA ++ + G +
Sbjct: 90 GYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPE 149
Query: 566 GESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRK 608
+L+ +GGVG A+++ + + G + +++R
Sbjct: 150 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV 192
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 3e-04
Identities = 38/158 (24%), Positives = 56/158 (35%), Gaps = 12/158 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ + + GG+GG G ++ L G V S S + + +
Sbjct: 24 AKRVAFVTGGMGGLGAAISRRLHDAGMA--VAVSHSERNDHVSTWLMHE-RDAGRDFKAY 80
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNA----SLGPKAN 894
D+ + G VD + N A + +DA F T D++A L N
Sbjct: 81 AVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFN 140
Query: 895 ATKYFDKYSRTMCPT-LGQFVVFSSVSCGRGNAGQTNY 931
TK F M G+ V SV+ RG GQ NY
Sbjct: 141 VTKQF---IAGMVERRFGRIVNIGSVNGSRGAFGQANY 175
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 3e-04
Identities = 40/169 (23%), Positives = 62/169 (36%), Gaps = 28/169 (16%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLT--SRSGVKNGYQALRIKIWKSYDVQVL 837
++ ++ GG G GL A RGAR LVL+ + ++ LR
Sbjct: 30 DGRAAVVTGGASGIGLATATEFARRGAR-LVLSDVDQPALEQAVNGLR-----GQGFDAH 83
Query: 838 ISTDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASL-----GP 891
D+ +V L EA LG VD +F+ A ++ +D+ + G
Sbjct: 84 GVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGS 143
Query: 892 KANATKYFDKYSRTMCPTL------GQFVVFSSVSCGRGNAGQTNYGMA 934
+A + F P L G +S + NAG YG+A
Sbjct: 144 -IHAVEAF-------LPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVA 184
|
| >2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1 Length = 105 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 4e-04
Identities = 12/72 (16%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Query: 1020 TNIVDAVINILG-----LRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI 1074
++ + IL + T++ + L G+ S +V++ +E F++ +
Sbjct: 21 GHMNATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLL 80
Query: 1075 RGLTFAKLQDIA 1086
+FA ++ I
Sbjct: 81 NRKSFASIKAIE 92
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 4e-04
Identities = 35/159 (22%), Positives = 57/159 (35%), Gaps = 21/159 (13%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVL-TSRSGVKNGYQALRIKIWKSYDVQVLI 838
+K+ +I G G G + GAR + ++ +A+
Sbjct: 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVM------- 56
Query: 839 STDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATK 897
D+ A V EA LG +DG+ + A + +D ED+ L + N T
Sbjct: 57 ---DVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVL--RVNLTG 111
Query: 898 YFDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNY 931
F ++ + G V+ +S GN GQ NY
Sbjct: 112 SF-LVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANY 148
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 11/66 (16%)
Query: 1194 PPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKL-EQLGTKCHLYLVD 1252
++ +MA+++L + +G+S GG+VA ++A+ E++ L V
Sbjct: 57 GALSLADMAEAVLQQAPDK-AI------WLGWSLGGLVASQIALTHPERVR---ALVTVA 106
Query: 1253 SAPDYV 1258
S+P +
Sbjct: 107 SSPCFS 112
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247 | Back alignment and structure |
|---|
Score = 42.8 bits (102), Expect = 4e-04
Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K+ I+ G G G +A L GA ++ S + A + K+ + V+++
Sbjct: 4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPA--STSLDATAEEF-KAAGINVVVA 60
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+ V N++ A + G +D + N A + +D L + +D++ L N
Sbjct: 61 KGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVL--NTNLKSA 118
Query: 899 FDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNY 931
+ ++ + + G+ + +S++ GNAGQ NY
Sbjct: 119 Y-LCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANY 155
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 4e-04
Identities = 35/190 (18%), Positives = 69/190 (36%), Gaps = 24/190 (12%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ ++ GG G G + + L GAR + SR+ K + L I W+ + V S
Sbjct: 20 KGTTALVTGGSKGIGYAIVEELAGLGAR-VYTCSRNE-KELDECLEI--WREKGLNVEGS 75
Query: 840 TDDITTEAGVVNLLTEANKL--GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATK 897
D+ + L+ + G ++ + N A V+ ++ T +D+N +G A
Sbjct: 76 VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 135
Query: 898 YFDKY-SRTMCPTLGQFVVF-SSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGL-- 953
+ + + + V+F SS++ + Y + + +
Sbjct: 136 HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKG------------AINQMTK 183
Query: 954 --AVEWGAVG 961
A EW
Sbjct: 184 SLACEWAKDN 193
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 4e-04
Identities = 36/158 (22%), Positives = 62/158 (39%), Gaps = 12/158 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
KS ++ G G G +A L G V + S K +A+ +I K+ V
Sbjct: 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGS--KEKAEAVVEEI-KAKGVDSFAI 59
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
++ V ++ E ++ G +D + N A + +D L ++++ + N
Sbjct: 60 QANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVI--DTNLKGV 117
Query: 899 FDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNY 931
F + P + G + SSV GN GQ NY
Sbjct: 118 F-NCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANY 154
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 4e-04
Identities = 36/158 (22%), Positives = 63/158 (39%), Gaps = 12/158 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K ++ G G G +A L +GA +V + + + + +I K +
Sbjct: 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGN--EQKANEVVDEI-KKLGSDAIAV 59
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+ V N++ + + G VD + N A V KD L E+++ + N
Sbjct: 60 RADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVI--NTNLKGV 117
Query: 899 FDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNY 931
F ++ + + G+ V +SV GN GQ NY
Sbjct: 118 F-LCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANY 154
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 4e-04
Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 13/127 (10%)
Query: 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTN-------PPDTIPEMADSLLP 1207
NN+ I +V G+ G L LA+++ + Q D N P P MA L+
Sbjct: 14 HNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDVRNHGLSPREPVMNYPAMAQDLVD 73
Query: 1208 HFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKCHLYLVDSAP-DYVLTSLRKLP 1266
D+ +G S GG + L K L +D AP DY + ++
Sbjct: 74 TLDA---LQIDKATFIGHSMGGKAVMALTALAPDRIDK--LVAIDIAPVDYHVRRHDEIF 128
Query: 1267 DWNAKLN 1273
++
Sbjct: 129 AAINAVS 135
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 5e-04
Identities = 30/169 (17%), Positives = 52/169 (30%), Gaps = 37/169 (21%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKN-------GYQALRIKIWKSY 832
KS +I G G G A+ V GA + + + G A +++
Sbjct: 7 EGKSALITGSARGIGRAFAEAYVREGAT-VAIADIDIERARQAAAEIGPAAYAVQM---- 61
Query: 833 DVQVLISTDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNAS--- 888
D+T + + + G +D + N A + A T E +
Sbjct: 62 ---------DVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAI 112
Query: 889 ------LGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931
+A A + R G+ + +S + RG A Y
Sbjct: 113 NVAGTLFTLQA-AARQMIAQGRG-----GKIINMASQAGRRGEALVAIY 155
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A Length = 181 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 1158 NTIFMVPGIEGIATVLEPLAKNINAQ----VLVFQFDHTNPPDTIPEMADSLLPHFKKRL 1213
N + MV GI G + + + +Q ++ D + T L +K L
Sbjct: 4 NPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPVLSRFVQKVL 63
Query: 1214 -VHGTDEIKLVGFSFGGMVALELAIKL 1239
G ++ +V S GG L L
Sbjct: 64 DETGAKKVDIVAHSMGGANTLYYIKNL 90
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 6e-04
Identities = 24/185 (12%), Positives = 51/185 (27%), Gaps = 26/185 (14%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ ++ GG G G R + + ++ +K ++
Sbjct: 6 EARRVLVYGGRGALGSRCVQAFRARNWW-VASIDVVENEEASASVIVK----------MT 54
Query: 840 TDDITTEAGVVNLLTEANKLGPVDGIFNLA-VVLKDALFENQTPEDFNASLGPKANATKY 898
V + + VD I +A ++ + K +
Sbjct: 55 DSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMW--KQSIWTS 112
Query: 899 FDKYSRTMCPTL---GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAV 955
S L G + + + G G YGMA + ++C++ LA
Sbjct: 113 T-ISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQS--------LAG 163
Query: 956 EWGAV 960
+ +
Sbjct: 164 KNSGM 168
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 6e-04
Identities = 29/173 (16%), Positives = 48/173 (27%), Gaps = 33/173 (19%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSG----------VKNGYQALRIKIW 829
+ ++ G G G A GA +VL R+ G I
Sbjct: 13 KGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIAL 71
Query: 830 KSYDVQVLISTDDITTEAGVVNLLTEANK-LGPVDGIFNLAVVLKD-ALFENQTPEDFNA 887
+ T L G +DG+ + A ++ E EDF
Sbjct: 72 NL----------ENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQ 121
Query: 888 SL-----GPKANATKYFDKYSRTMCPTLGQFVVF-SSVSCGRGNAGQTNYGMA 934
+ T+ + + + F SS +G A YG++
Sbjct: 122 VMHVNVNAT-FMLTRALL---PLLKRSEDASIAFTSSSVGRKGRANWGAYGVS 170
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 6e-04
Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 20/164 (12%)
Query: 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIST 840
NK ++ G G G A L G ++ +RS K +I + V+VL+
Sbjct: 4 NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARS--KKAALETAEEI-EKLGVKVLVVK 60
Query: 841 DDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASL-----GP--- 891
++ A + + + G +D N A ++ ++
Sbjct: 61 ANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFC 120
Query: 892 -KANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934
+ A K +K G V SS+ R T G++
Sbjct: 121 AQE-AAKLMEKNGG------GHIVSISSLGSIRYLENYTTVGVS 157
|
| >1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1 Length = 95 | Back alignment and structure |
|---|
Score = 39.5 bits (92), Expect = 6e-04
Identities = 10/53 (18%), Positives = 18/53 (33%)
Query: 1022 IVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI 1074
++ DL LG DS+ + +ER++ V L +
Sbjct: 12 LLRECAGEEESIDLGGDVEDVAFDALGYDSLALLNTVGRIERDYGVQLGDDAV 64
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 6e-04
Identities = 25/165 (15%), Positives = 51/165 (30%), Gaps = 20/165 (12%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
NK +I GG+ G A L ++ ++ + L+ ++ + +V +
Sbjct: 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDEL-EDQGAKVALY 68
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASL-----GP-- 891
D++ E V L A + G VD N + + +F+A
Sbjct: 69 QSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYF 128
Query: 892 --KANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934
K A K+ + + ++ + Y
Sbjct: 129 FIKQ-AAKHMNPNGH--------IITIATSLLAAYTGFYSTYAGN 164
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 7e-04
Identities = 36/178 (20%), Positives = 61/178 (34%), Gaps = 27/178 (15%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K ++ G GG G+E+ L + R+ AL V
Sbjct: 4 KKKIAVVTGATGGMGIEIVKDLSRDHI--VYALGRN--PEHLAALAEIE------GVEPI 53
Query: 840 TDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASL-----GPKAN 894
DI E + + L VD + + A V +D E + +++A L P A
Sbjct: 54 ESDIVKEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVP-AE 112
Query: 895 ATKYFDKYSRTMCPTL----GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAE 948
+ R + P L G + +S + + G T Y + + + +A R E
Sbjct: 113 LS-------RQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKE 163
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 7e-04
Identities = 44/237 (18%), Positives = 76/237 (32%), Gaps = 41/237 (17%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
+ +E + C T A ++ S + G+G VG +A+ A+ A I
Sbjct: 159 VTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVT-WGAGAVGLSALLAAKVCGASI 217
Query: 594 FTTVGT-PEKREFIRK---TFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLA-E 648
V + E ++ T I NS+ + + T G GV+ L S
Sbjct: 218 IIAVDIVESRLELAKQLGAT-HVI------NSKTQDPVAAIKEITDG-GVNFALESTGSP 269
Query: 649 EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSL 708
E L+ V L G+ +G F + + +
Sbjct: 270 EILKQGVDALGILGKIAVVG---APQLGT--------TAQFDVN---DLLLGGKTILGVV 315
Query: 709 ------QKALQKAID---AGA--VQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754
+K + + + G LV+ D++ +A G + K IIKI
Sbjct: 316 EGSGSPKKFIPELVRLYQQGKFPFDQLVKFY-AFDEINQAAIDSRKGITL-KPIIKI 370
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 7e-04
Identities = 30/159 (18%), Positives = 52/159 (32%), Gaps = 11/159 (6%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ ++ GG G G +A L G +V+T R + A +I V
Sbjct: 32 EGRIALVTGGGTGVGRGIAQALSAEGYS-VVITGRR--PDVLDAAAGEIGGRTGNIVRAV 88
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDAL-FENQTPEDFNASL-----GPK 892
D+ V L + +D + N A + E T E +N + G
Sbjct: 89 VCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGA- 147
Query: 893 ANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931
T++ + + P G+ + S+S Y
Sbjct: 148 FLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPY 186
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 8e-04
Identities = 26/158 (16%), Positives = 51/158 (32%), Gaps = 18/158 (11%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+K I+ G G G +A+ V G+ K++ S + I+
Sbjct: 7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHD-PGEAKYDHIEC----------- 53
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+T V + + G + + N A + E+ + ++ + Y
Sbjct: 54 --DVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYY 111
Query: 899 FDKY-SRTMCPTLGQFVV-FSSVSCGRGNAGQTNYGMA 934
K+ M + +V SSV + Y +
Sbjct: 112 ASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTS 149
|
| >2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A Length = 88 | Back alignment and structure |
|---|
Score = 38.9 bits (91), Expect = 8e-04
Identities = 9/50 (18%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 1022 IVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTP 1071
++D L + D + + + ++S A+ + LE+ L P
Sbjct: 19 LIDQFAQQLDV-DPDDIDMEESFDNYDLNSSKALILLGRLEKWLGKELNP 67
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 8e-04
Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 13/158 (8%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ I+ G G G +A L RGA ++ T+ + + G + + K ++ +
Sbjct: 27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATT--EAGAEGIGAAF-KQAGLEGRGA 82
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
++ V L+ + G ++ + N A + +D L ++++A + N
Sbjct: 83 VLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVI--DTNLKAV 140
Query: 899 FDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNY 931
F + SR + + G+ V +SV GN GQ NY
Sbjct: 141 F-RLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNY 177
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 8e-04
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K ++ G G G +A+ L RGA K++ T+ S ++G QA+
Sbjct: 8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATS--ESGAQAIS----DYLGDNGKGM 60
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
++T + +L ++ G VD + N A + +D L E+++ + + N T
Sbjct: 61 ALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIM--ETNLTSI 118
Query: 899 FDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNY 931
F + S+ + + G+ + SV GNAGQ NY
Sbjct: 119 F-RLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANY 155
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1392 | |||
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 100.0 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 100.0 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 100.0 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 100.0 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 100.0 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 100.0 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 100.0 | |
| 4a27_A | 349 | Synaptic vesicle membrane protein VAT-1 homolog-L; | 100.0 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 100.0 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 100.0 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 100.0 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 100.0 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 100.0 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 100.0 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 100.0 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 100.0 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 100.0 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 100.0 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 100.0 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 100.0 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 100.0 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 100.0 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 100.0 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 100.0 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 100.0 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 100.0 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 100.0 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 100.0 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 100.0 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 100.0 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 100.0 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 100.0 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 100.0 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 100.0 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 100.0 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 100.0 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 100.0 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 100.0 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 100.0 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 100.0 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 100.0 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 100.0 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 100.0 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 100.0 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 100.0 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 100.0 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 100.0 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 100.0 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 100.0 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 100.0 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 100.0 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 100.0 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 100.0 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 100.0 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 100.0 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 100.0 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 100.0 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 100.0 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 100.0 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 100.0 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 100.0 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 100.0 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 100.0 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 100.0 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 100.0 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 100.0 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 100.0 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.98 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.97 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.97 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.96 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.96 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.95 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.94 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 99.94 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.93 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.93 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.92 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.92 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.91 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.9 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.9 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.9 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.9 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.89 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.89 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.89 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.89 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.89 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.89 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.89 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.89 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.89 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 99.89 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.88 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.88 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.88 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.88 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.88 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.88 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.88 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.88 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.88 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.88 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.88 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.88 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.88 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.88 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.88 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.88 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.88 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.88 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.88 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.88 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.88 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.88 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.88 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.88 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.88 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.88 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.88 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.87 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.87 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.87 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.87 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.87 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.87 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.87 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.87 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.87 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.87 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.87 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.87 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.87 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.87 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.87 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.87 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.87 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.87 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.87 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.87 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.87 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.87 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.86 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.86 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.86 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.86 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.86 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.86 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.86 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.86 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.86 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.86 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.86 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.86 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.86 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.86 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.86 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.86 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.86 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.86 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.86 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.86 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.86 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.86 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.86 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.86 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.86 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.86 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.86 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.85 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.85 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.85 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.85 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.85 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.85 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.85 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.85 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.85 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.85 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.85 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.85 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.85 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.85 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.85 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.85 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.85 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.85 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.85 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.85 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.85 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.85 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.85 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.85 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.84 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.84 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.84 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.84 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.84 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.84 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.84 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.84 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.84 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.84 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.84 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.84 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.84 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.84 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.84 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.84 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.84 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.84 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.84 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.84 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.84 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.84 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.84 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.83 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.83 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.83 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.83 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.83 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.83 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.83 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.83 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.83 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.83 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.83 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.83 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.83 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.83 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.83 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.83 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.83 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.82 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.82 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.82 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.82 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.82 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.82 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.82 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.82 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.82 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.82 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.82 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.82 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.82 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.82 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.82 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.82 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.82 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.82 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.82 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.81 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.81 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.81 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.81 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.81 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.81 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.81 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.81 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.81 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.81 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.81 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.8 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.8 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.8 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.8 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.8 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.8 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.79 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.79 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.79 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.79 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.78 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.78 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.78 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.78 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.78 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.78 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.78 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.78 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.77 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.76 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.76 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.76 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.76 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.76 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.75 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.75 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.74 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.74 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.74 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.73 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.73 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.72 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.72 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.71 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.65 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.6 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.6 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.57 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.57 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.57 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.53 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.48 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.44 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.44 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.43 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.42 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.41 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.41 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.41 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.41 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.4 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.4 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.4 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.39 | |
| 3kg6_A | 285 | CURF; polyketide synthase, double hotdog fold, deh | 99.39 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.39 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.38 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.37 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.36 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.36 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.35 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.35 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.35 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.35 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.34 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.34 | |
| 3kg8_A | 308 | CURJ; polyketide synthase, double hotdog fold, deh | 99.33 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.33 | |
| 3kg9_A | 296 | CURK; polyketide synthase, double hotdog fold, deh | 99.33 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.32 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.32 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.32 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.32 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.32 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.32 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.31 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.31 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.3 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.3 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.29 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.29 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.28 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.28 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.28 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.27 | |
| 3el6_A | 313 | Erythromycin dehydratase; dehydratase double hotdo | 99.27 | |
| 3kg7_A | 293 | CURH; polyketide synthase, double hotdog fold, deh | 99.26 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.26 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.25 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.25 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.25 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.24 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.23 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.23 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.23 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.23 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.22 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.22 | |
| 2cg5_B | 91 | Fatty acid synthase; transferase-hydrolase complex | 99.21 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.2 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.2 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.19 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.18 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.18 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.17 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.17 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.17 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.16 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.16 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.14 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.13 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.1 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.1 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 99.1 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.09 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.08 | |
| 3hrq_A | 357 | PKS, aflatoxin biosynthesis polyketide synthase; h | 99.07 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.07 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 99.05 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.05 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 99.05 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 99.04 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.02 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.02 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.01 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.01 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.0 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 98.99 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 98.99 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 98.99 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 98.98 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 98.97 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 98.96 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 98.95 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 98.95 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 98.95 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 98.94 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 98.94 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 98.94 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 98.92 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 98.92 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 98.92 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 98.92 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 98.91 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 98.91 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 98.9 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 98.9 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 98.89 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 98.88 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 98.87 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 98.87 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 98.87 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 98.87 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 98.87 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 98.87 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 98.87 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 98.86 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 98.86 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 98.86 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 98.85 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 98.85 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 98.85 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 98.85 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 98.85 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 98.85 | |
| 4i4d_A | 93 | Peptide synthetase NRPS type II-PCP; structural ge | 98.83 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 98.83 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 98.83 | |
| 1dny_A | 91 | Non-ribosomal peptide synthetase peptidyl carrier | 98.82 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 98.82 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 98.82 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 98.82 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 98.81 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 98.81 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 98.81 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 98.3 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 98.8 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 98.8 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 98.8 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 98.79 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 98.79 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 98.78 | |
| 2ju1_A | 95 | Erythronolide synthase; carrier protein domain, mo | 98.76 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 98.76 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 98.75 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 98.75 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 98.73 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 98.73 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 98.71 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 98.7 | |
| 2afd_A | 88 | Protein ASL1650; twisted antiparallel helical bund | 98.7 | |
| 2cq8_A | 110 | 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH | 98.69 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 98.68 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 98.67 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 98.67 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 98.66 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 98.66 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 98.66 | |
| 2kr5_A | 89 | PKS, aflatoxin biosynthesis polyketide synthase; a | 98.66 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 98.65 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 98.65 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 98.64 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 98.64 | |
| 2liu_A | 99 | CURA; holo state, transferase; NMR {Lyngbya majusc | 98.64 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 98.63 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 98.63 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 98.63 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 98.61 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 98.61 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 98.6 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 98.59 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 98.59 | |
| 1l0i_A | 78 | Acyl carrier protein; acyl chain binding, fatty ac | 98.58 | |
| 2ehs_A | 77 | ACP, acyl carrier protein; lipid transport, struct | 98.57 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 98.56 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 98.56 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 98.56 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 98.53 | |
| 2ava_A | 82 | ACP I, acyl carrier protein I, chloroplast; four-h | 98.53 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 98.52 | |
| 2dnw_A | 99 | Acyl carrier protein; ACP, fatty acid biosynthesis | 98.51 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 98.5 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 98.5 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 98.5 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 98.5 | |
| 1x3o_A | 80 | Acyl carrier protein; structural genomics, riken s | 98.49 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 98.49 | |
| 2lol_A | 81 | ACP, acyl carrier protein; lipid transport; NMR {R | 98.48 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 98.48 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 98.47 | |
| 1or5_A | 83 | Acyl carrier protein; ACP, biosynthesis, frenolici | 98.47 |
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-145 Score=1538.37 Aligned_cols=1305 Identities=40% Similarity=0.693 Sum_probs=783.7
Q ss_pred ceeEeeccccCCCC-cccccccchh-hHH----HHHHHHHHHHHHHcCCCCccCCEEeeeeeeeeeeeeCCCCeEEEEEE
Q psy1119 34 LVQLKNSFRSLSAS-PKRLASTALD-RVY----QRFQMAWETVSLMRGELYTEVPVVFENIKFMRATNVPKEGSVEFIVM 107 (1392)
Q Consensus 34 ~~~~~~~~~~~~~~-~~~l~gh~id-r~l----~yl~l~W~t~a~~~~~~~~~~pv~fe~v~~~rat~l~~~~~v~~~v~ 107 (1392)
...+.++++ .++ ..||.||+|+ +++ ||+.++|++++...+......|++|+|++|++++++++++.+++.+.
T Consensus 859 ~~~~~~~~~--~~~~~~wl~~H~v~g~~~~P~~~y~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 936 (2512)
T 2vz8_A 859 VAVYKFDVS--PESPDHYLVDHCIDGRVLFPGTGYLWLTWKTLARALSQNLEETPVVFEDVTLHQATILPKTGTVSLEVR 936 (2512)
T ss_dssp EEEEEEECS--TTSGGGGGGGCEETTEEECCHHHHHHHHHHHHHHHTTCCGGGCCEEEEEEEECSCCEECSSSEEEEEEE
T ss_pred eEEEEEEcc--cccCCchhccCeECCEEeeCcHHHHHHHHHHHHHhhccccccCCeEEEeeEEeeceeecCCCCEEEEEE
Confidence 445677776 556 4499999999 988 99999999999988887888899999999999999999999999999
Q ss_pred EEeccccEEEee-CCcEEEEEEEEccCCcccccccCCCCCCCCCCCcccccCChhhHHHHHHhcCCccCccccceeeecc
Q psy1119 108 VQKGSGNFEIVE-GGAAIVTGKVYIPADVKTEMVRIPDQYKIPRTEGEAIELQSRDIYKELRLRGYHYKGLFRSLNVADG 186 (1392)
Q Consensus 108 i~~~sg~Fei~~-~~~~vvsG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~diYkel~lrGy~y~~~F~~i~~~~~ 186 (1392)
+.++++.|+|+. +++..++|+|+.........+...... .+........++.+++|++|+.+||+||+.||+|+++..
T Consensus 937 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Y~~~~~~g~~yg~~F~~~~~~~~ 1015 (2512)
T 2vz8_A 937 LLEASHAFEVSDSNGSLIASGKVYQWESPDPKLFDTRAAV-DPADSTAEFRLSQGDVYKDLRLRGYDYGPFFQLVLESDL 1015 (2512)
T ss_dssp EETTTTEEEEEETTCCEEEEEEEEECSSCCGGGGCCCCSS-CCCCCSSSCEEEHHHHHHHHHHHTCCCCGGGCCEEEEET
T ss_pred EEcCCceEEEecCCCcEEEEEEEEecCCCCcccccccccc-ccccccccccCCHHHHHHHHHHhcCcCCchhcCeeeEEE
Confidence 999999999998 788999999987655444322211100 011112223578899999999999999999999999999
Q ss_pred CCceeEEEecccchhhhhhhhheeccccCCCceecccceeeEEEcchhhHhhhhccCCCCCeeeEEEecccCcEEeccEE
Q psy1119 187 AGTQGKIRWHNNWVAFMDNMLQLQILQYDTRGLFVPTSIQKLVINVSDHVNLLSTLDEETPEYPVFVYKEVEVIKSGGVE 266 (1392)
Q Consensus 187 ~g~~g~i~W~~nWv~f~d~mlQ~~il~~~~~~l~~Pt~i~~~~i~p~~h~~~~~~~~~~~~~~~v~~~~~~~~~~~ggve 266 (1392)
++..|++.|.++|.++||++||..++..+.+.+|||++|+++.|+|..|.........+....++.++...+.++++|++
T Consensus 1016 ~~~~~~~~~~~~~~~~lD~~lq~~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1095 (2512)
T 2vz8_A 1016 EGNRGRLQWNDSWVSFLDAMLHMSILAPGQLGLYLPTRFTSIRIDPVTHRQKLYTLQDTTQAADVVVDRNLNTVVAGGAL 1095 (2512)
T ss_dssp TSSEEEEEECSCHHHHHHHHHHHHHTCTTCCSCEEECBCSCCEECHHHHHHHCEECSSSCEEEEEEEETTTTEEEETTEE
T ss_pred cCceEEEecCCccchHHHHHHHHHHHhccCCcceecceEeEEEEecCCccceeEeccCCCceeEEEEECCCCcEEeeeEE
Confidence 99999999999999999999999998888888999999999999999887655443344445788899999999999999
Q ss_pred EeceeeeccCCCCCCC-CCeeeeEEeeeCcccc--------------------------------c--C-----------
Q psy1119 267 IRGLKASAIPRKKPLG-EPVLEKYKFIQNEGLK--------------------------------V--K----------- 300 (1392)
Q Consensus 267 i~gl~~~~~~rr~~~~-~p~le~~~Fvp~~~~~--------------------------------~--~----------- 300 (1392)
|.|++++.++++.... .|.++++.|.|+.... . +
T Consensus 1096 ~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1175 (2512)
T 2vz8_A 1096 FLGAHSSVAPRRPQEHLKPILEKFCFTPHVESGCLAGNTALQEELQLCRGLAQALQTKVAQQGLKMVVPGLDGAQAPREA 1175 (2512)
T ss_dssp EESCCEEECCCCCCTTSCCEEEECCEEESEEEEECCCCCCC---------------------------------------
T ss_pred EeccEEeecCcccccCCCcceeeEEEEecCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhccccccc
Confidence 9999999988876433 3666666665532000 0 0
Q ss_pred ------------------------------------------------------------C-------------------
Q psy1119 301 ------------------------------------------------------------S------------------- 301 (1392)
Q Consensus 301 ------------------------------------------------------------~------------------- 301 (1392)
+
T Consensus 1176 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilEigagtg~~t 1255 (2512)
T 2vz8_A 1176 PQQSLPRLLAAACQLQLNGNLQLELGQVLAQERPLLCDDPLLSGLLDAPALKACVDTALENMASPKMKVVEVLAGDGQLY 1255 (2512)
T ss_dssp -----------------------------------------CSSCCCSSTTHHHHHHHHTTSSSSEEEEEEESCSSSCCT
T ss_pred cccchHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccchHHHHhhhhHHHHHHHHHHhcCCCCCceEEEECCCccHHH
Confidence 0
Q ss_pred -----------------------------------------------CC-------------------------------
Q psy1119 302 -----------------------------------------------PV------------------------------- 303 (1392)
Q Consensus 302 -----------------------------------------------~~------------------------------- 303 (1392)
.+
T Consensus 1256 ~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~vl~~t~~~~~~l~~~~ 1335 (2512)
T 2vz8_A 1256 SRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNCALATLGDPAVAVGNMA 1335 (2512)
T ss_dssp TTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEECC---------------
T ss_pred HHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEcccccccccHHHHHHHHH
Confidence 00
Q ss_pred --------------------------------------------------------------------------CCCCeE
Q psy1119 304 --------------------------------------------------------------------------KISPLV 309 (1392)
Q Consensus 304 --------------------------------------------------------------------------~~~~~~ 309 (1392)
.+.|++
T Consensus 1336 ~lL~p~G~l~~~e~~~~~~~g~~~~~~~~~~r~~~~~~~~~~w~~~l~~~gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1415 (2512)
T 2vz8_A 1336 ATLKEGGFLLLHTLLAGHPLGEMVGFLTSPEQGGRHLLSQDQWESLFAGASLHLVALKRSFYGSVLFLCRQQTPQDSPVF 1415 (2512)
T ss_dssp -----CCEEEEEEC--------------------------CTTTTSSTTTTEEEEEEEEETTSCEEEEEEECCCCCCCEE
T ss_pred HhcCCCcEEEEEeccccccccccccccccccccCCcccCHHHHHHHHHhCCCceeeeccCCCceEEEEEeccccCCCCEE
Confidence 001122
Q ss_pred eecChhccccHHHHHHHHhhcccCCCceEEEEcCCCCchhHhHHHHHHhhhcCCCceEEEEEcCC----CCCCCCCChhH
Q psy1119 310 IKVSGVDFHWIPILQKALAAEETSTKQKIILLSQLEPLSGIIGFFNCIRKETGGERTRCFEILDK----NAPPFNPEDPF 385 (1392)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~~~~Gl~r~lr~E~~~~~~~~~~~~~~----~~~~~~~~~~~ 385 (1392)
+.+++.+|.|++.|++.+..+. .+.+|+++++++.++++||+||+|+|+++.+++++++++. ..+.+...+.+
T Consensus 1416 ~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~Gl~r~l~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1492 (2512)
T 2vz8_A 1416 LSVEDTSFRWVDSLKDILADAS---SRPVWLMAVGCSTSGVVGMVNCLRKEPGGHRIRCVLVSNLSSTSPAPEMHPSSSE 1492 (2512)
T ss_dssp EECCCTTCTHHHHHSSTTTSSC---CCCEEEEESSCTTCCHHHHHHHHTTSGGGTTSCCEEEECCCCSTTCCCCCCSSSH
T ss_pred EEecCchHHHHHHHHHHHHhcC---CCcEEEECCCchhhhhHHHHHHHHhcCCCCCEEEEEecCCcccccccccchhhHH
Confidence 2233344555555554443321 2467999888888889999999999999888999999754 23445555678
Q ss_pred HHHHhhcCceEEEEecCcccceeecccCccc-ccccCceeEeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEE
Q psy1119 386 YKVQVEKDLAVNILRNGQWGTYRHSILQPIK-RVMTDHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIY 464 (1392)
Q Consensus 386 ~~~~~~~~~~~~v~r~g~~~~~~~~~~~~~~-~~~~~~~~l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~ 464 (1392)
|.+++..+...|++|+|.|+.+|+.+..... .....+.++....+|.+++|+|.+.+....+. +.++||+|+|+
T Consensus 1493 ~~~~~~~~~~~~~~r~~~~~~~R~~~~~~~~~~~~~~~~~l~~~~~g~l~sl~~~~~~~~~~~~-----l~~~eVlVkV~ 1567 (2512)
T 2vz8_A 1493 LQKVLQGDLVMNVYRDGAWGAFRHFPLEQDRPEKQTEHAFVNVLSRGDLSSIRWVCSPLHYALP-----ASCQDRLCSVY 1567 (2512)
T ss_dssp HHHHHHSCCSEEEEETTEEEEECCEECCCCCCEEEESCEEEEESSTTCTTSEEEEECTTTTCCC-----HHHHTTEEEEE
T ss_pred HHHHHhcCCceEEEEcCccceEEEeecccccccccccceEEEccCCCCcCceEEEecCcccccC-----CCCCceEEEEE
Confidence 8888888888999999999999887655221 11235568999999999999999877533110 23789999999
Q ss_pred EEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEeeCCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHh
Q psy1119 465 YSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAA 544 (1392)
Q Consensus 465 a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA 544 (1392)
|+||||+|++++.|.++....+......++++|+|++|+|. +||+|+++...|+|++|+++|+..++++|+++|+++||
T Consensus 1568 aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~-vGdrV~g~~~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA 1646 (2512)
T 2vz8_A 1568 YTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA-SGRRVMGMVPAEGLATSVLLLQHATWEVPSTWTLEEAA 1646 (2512)
T ss_dssp EEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET-TSCCEEEECSSCCSBSEEECCGGGEEECCTTSCHHHHT
T ss_pred ecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc-cCCEEEEeecCCceeeEEEcccceEEEeCCCCCHHHHH
Confidence 99999999999999887543332233457899999999997 99999999888999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCc
Q psy1119 545 TVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDT 624 (1392)
Q Consensus 545 ~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~ 624 (1392)
++|++++|||+++...+++++|++||||||+|+||++++|+|++.|++||+|+++++|++++++.++++++++++|+++.
T Consensus 1647 ~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~ 1726 (2512)
T 2vz8_A 1647 SVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDT 1726 (2512)
T ss_dssp TSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSS
T ss_pred HhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCH
Confidence 99999999999999899999999999999999999999999999999999999999999999998877899999999999
Q ss_pred cHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHH
Q psy1119 625 SFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEW 704 (1392)
Q Consensus 625 ~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~ 704 (1392)
+|.+.+++.|+|+|+|+|||+++++.++.+++||+++||++.+|..+......+.+..+.+++++.++.+..+....+..
T Consensus 1727 ~~~~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~ 1806 (2512)
T 2vz8_A 1727 SFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGAT 1806 (2512)
T ss_dssp HHHHHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHH
T ss_pred HHHHHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHHHHhhhCHHH
Confidence 99999999999999999999999999999999999999999999876555555567788899999999876655545555
Q ss_pred HHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEecCCCCccccCCcccc--cccCCccccCCCC
Q psy1119 705 KMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQ--LLAVPRYYADSNK 782 (1392)
Q Consensus 705 ~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 782 (1392)
...+.+.+..++.+|.++|+++++|+++++++||+.++++++.||+||.++++... ....+..+ ++..++.+|++++
T Consensus 1807 ~~~~l~~l~~~~~~g~l~p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~k 1885 (2512)
T 2vz8_A 1807 WQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVREEEQG-PAPRGLPPIALTGLSKTFCPPHK 1885 (2512)
T ss_dssp HHHHHHHHHHHHTTTCSCCCCEEEEESSTHHHHHHHHHTTCCSSEEEEECSCCCCS-SCCCCCCCCCEEEECCCCCCTTC
T ss_pred HHHHHHHHHHHHHcCCcCCCcceEecHHHHHHHHHhhhccCccceEEEECCCcccc-cccccccccccccccccccCCCC
Confidence 66777778788889999999999999999999999999999999999999765332 11100000 1223456789999
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
+||||||+||||+++|+||+++||++|++++|++...+...+.+++++..|+++.+++|||+|.++++++++++.++|+|
T Consensus 1886 ~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g~i 1965 (2512)
T 2vz8_A 1886 SYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLGPV 1965 (2512)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHSCE
T ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999987766666777888888999999999999999999999998778999
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHHHH
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERIC 942 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~la 942 (1392)
|+||||||++.++++.+++.++|++++++|+.|+|+|++++.+.++.+++||++||+++..|++||++|+|||+++++|+
T Consensus 1966 d~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y~aaKaal~~l~ 2045 (2512)
T 2vz8_A 1966 GGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANSAMERIC 2045 (2512)
T ss_dssp EEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHHHHHHHHHHHHH
T ss_pred cEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888878899999999999999999999999999999999
Q ss_pred HHHHHcCCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccCCCeEEehhhhhhh----cCCCC
Q psy1119 943 EARRAEGLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKK----AGSGG 1018 (1392)
Q Consensus 943 ~~r~~~Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~----~~~~~ 1018 (1392)
++||++|+|+++++||+++++|+++++.. ...+...|..++.+.++++.++.++.++.|.+.++...+.. .....
T Consensus 2046 ~~rr~~Gl~~~a~~~g~~~~~G~~~~~~~-~~~~~~~g~~~~~~~~~l~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 2124 (2512)
T 2vz8_A 2046 EKRRHDGLPGLAVQWGAIGDVGVVLETMG-TNDTVIGGTLPQRIASCLEVLDLFLSQPHPVLSSFVLAEKKAAAPRDGSS 2124 (2512)
T ss_dssp HHHHHTTSCCCEEEECCBCTTSTTTC-----CCCCTTSEECBCHHHHHHHHHHHHTCSCSEEEEEEECC-----------
T ss_pred HHHHHCCCcEEEEEccCcCCcchhhhcch-hHHHHhhcccCccHHHHHHHHHHHhhCCCcccchhhhcccccccccccch
Confidence 99999999999999999999999998655 33344567778888899999999999888988776543221 11112
Q ss_pred cchHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhhccCCHHHHHHHHhcccCCCCCCCc
Q psy1119 1019 ATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIRGLTFAKLQDIAVSFENDDKSKPV 1098 (1392)
Q Consensus 1019 ~~~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i~~~ti~~La~~~~~~~~~~~~~~~ 1098 (1392)
.+.++++|+++|++.+.++|+++++|++||+|||+|+|||+||+++||+++++.+|..+|+.+|++++............
T Consensus 2125 ~~~l~~~~a~vL~~~~~~~i~~~~~~~~lG~DSL~avelr~~i~~~~~~~l~~~~i~~~t~~~la~~~~~~~~~~~~~~~ 2204 (2512)
T 2vz8_A 2125 QKDLVKAVAHILGIRDVASINPDSTLVDLGLDSLMGVEVRQILEREHDLVLSMREVRQLSLRKLQELSSKTSTDADPATP 2204 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhCCCcccccCCCCchHHhCcchHHHHHHHHHHHHHhCCcccHHHHHhhhHHHHHHHHhhcccccccccc
Confidence 35699999999998656789999999999999999999999999999999999999779999999887654322110000
Q ss_pred cccccCCcccccccCCCChhhHHHHHHhhccccccCCcccccCCccCCCCccccCCCCCceeEeecCCCccccccHHHHh
Q psy1119 1099 STEASGGQVTALSVEDIPDVGIQYLMRTIGDEILANKPVIRLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIATVLEPLAK 1178 (1392)
Q Consensus 1099 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~pLF~vp~agG~~~~y~~La~ 1178 (1392)
.... ... .. ............ .....++++|++. ++.++|||||||+||.+++|.+|++
T Consensus 2205 ~~~~---~~~------~~-~~~~~~~~~~~~-~~~~~~lv~l~~~----------~~~~~~Lfc~~~agG~~~~y~~l~~ 2263 (2512)
T 2vz8_A 2205 TSHE---DSP------VR-QQATLNLSTLLV-NPEGPTLTRLNSV----------QSAERPLFLVHPIEGSITVFHGLAA 2263 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccc---ccc------cc-cccccccccccc-cccCceeeecccc----------cCCCCCeEEeCCccccHHHHHHHHH
Confidence 0000 000 00 000000000000 0001123333321 2234799999999999999999999
Q ss_pred hcCCceEEEecCCCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHHHHHHHHHHHcCCcc----EEEEEeCC
Q psy1119 1179 NINAQVLVFQFDHTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKC----HLYLVDSA 1254 (1392)
Q Consensus 1179 ~L~~~~~v~~l~~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v----~LvLiD~~ 1254 (1392)
+|+.+++.+++.++++..++++||++|++.|++. +|+|||+|+||||||+||||||++|+++|.++ .|+++|+.
T Consensus 2264 ~l~~~v~~lq~pg~~~~~~i~~la~~~~~~i~~~--~p~gpy~L~G~S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg~ 2341 (2512)
T 2vz8_A 2264 KLSIPTYGLQCTGAAPLDSIQSLASYYIECIRQV--QPEGPYRIAGYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDGS 2341 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhCCcEEEEecCCCCCCCCHHHHHHHHHHHHHHh--CCCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEeCc
Confidence 9984444444457778899999999999999864 48999999999999999999999999999887 57899985
Q ss_pred CCCCcc--------c-------------------cCCCC------------ChHHHHHHHHhcCCccc-cCCHHHHHHHH
Q psy1119 1255 PDYVLT--------S-------------------LRKLP------------DWNAKLNYFLDLMPEDA-THSRTYQRNLA 1294 (1392)
Q Consensus 1255 p~~~~~--------~-------------------l~~~~------------~~~~~l~~~~~~~~~~~-~~~~~~l~~~~ 1294 (1392)
|..... . +.... .+.+.+..+.+.+.... ..+++.++.+.
T Consensus 2342 ~~~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~e~l~~~~ 2421 (2512)
T 2vz8_A 2342 HTFVLAYTQSVRAKMTPGCEAEAEAKAMYFFVQQFTDMEQGKVLEALIPLQGLEARVAATVDLITQSHAGLDRHALSFAA 2421 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHhhhhccccCccccchhhHHHHHHHHHHhhhccchhhhhhhcccccHHHHHHHHHHHhhhcccccCHHHHHHHH
Confidence 432100 0 00000 00000111111111101 11567788889
Q ss_pred HHHHHHHHhhccccCCCCCcccceEEEEeeCCCC-CC--ChhhcCcccccCCCeEEEEEccCccccccChHHHHHHHhhh
Q psy1119 1295 HAAYKRITSILKYTDPKHKAFGGNITLLRPTEQA-LP--TAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHED 1371 (1392)
Q Consensus 1295 ~~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~--~~~~~~W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~ 1371 (1392)
+.+++++++...|+|.. ++++||++|+++++. .. ...+++|++++++.++++.+||+||+|++++++..++..|+
T Consensus 2422 ~~~r~d~~~~~~Y~p~~--~l~~pI~lf~a~~d~~~~~~~~~~~~W~~~t~g~~~v~~v~G~H~~ml~~~~v~~la~~L~ 2499 (2512)
T 2vz8_A 2422 RSFYQKLRAAENYWPQA--TYHGNVTLLRAKTGGAYGEDLGADYNLSQVCDGKVSVHVIEGDHRTLLEGSGLESILSIIH 2499 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcCCCC--CccCCEEEEEecCCCcccccccccccHHHhcCCCcEEEEECCCchHhhCCccHHHHHHHHH
Confidence 99999999999998753 799999999998775 22 24568999999999999999999999999999889999999
Q ss_pred cccCCC
Q psy1119 1372 STDFKT 1377 (1392)
Q Consensus 1372 ~~L~~~ 1377 (1392)
..|..+
T Consensus 2500 ~~L~~~ 2505 (2512)
T 2vz8_A 2500 SCLAEP 2505 (2512)
T ss_dssp ------
T ss_pred HHHhhc
Confidence 888764
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-83 Score=829.92 Aligned_cols=631 Identities=26% Similarity=0.383 Sum_probs=523.5
Q ss_pred hhccccHHHHHHHHhhcccCCCceEEEEcCC----------CCchh-HhHHHHHHhhhcCCCceEEEEEcCCCCCCCCCC
Q psy1119 314 GVDFHWIPILQKALAAEETSTKQKIILLSQL----------EPLSG-IIGFFNCIRKETGGERTRCFEILDKNAPPFNPE 382 (1392)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~----------~~~~~-~~Gl~r~lr~E~~~~~~~~~~~~~~~~~~~~~~ 382 (1392)
...|..+|.+. ........+++|||... +|..+ ++||+|++|+|+|+ ++.++.++.... .
T Consensus 97 ~~~l~~~q~~l---~~~~~~~~~LlwVT~g~~~~~~~~~~~~p~~a~v~GL~Rtlr~E~p~-~~~~lDld~~~~----~- 167 (795)
T 3slk_A 97 RHALDLVQGWL---SDQRLNESRLLLVTQGAVAVEPGEPVTDLAQAALWGLLRSTQTEHPD-RFVLVDVPEPAQ----L- 167 (795)
T ss_dssp HHHHHHHHHHH---HHCSSSSCEEEEEESSCSCCSTTCCCSCHHHHHHHHHHHHHHHHSTT-SEEEEECSSTTS----H-
T ss_pred HHHHHHHHHHH---hccccCCCcEEEEECCCcccCCCCCCCCHHHHHHHHHHHHHHhcCCC-CeEEEECCCCcc----h-
Confidence 34465555554 43111125788998641 35555 79999999999997 455555543211 1
Q ss_pred hhHHHHHhhcCceEEEEecCcccceeecccCcc---cccccCceeEeeccCCCCCCceEEeCCCCcccccccCCCCCCeE
Q psy1119 383 DPFYKVQVEKDLAVNILRNGQWGTYRHSILQPI---KRVMTDHAYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHD 459 (1392)
Q Consensus 383 ~~~~~~~~~~~~~~~v~r~g~~~~~~~~~~~~~---~~~~~~~~~l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~ev 459 (1392)
.......+..+....++|+|.+...|..+.... .........+....+|.+++|+|.+.|.|..+ ++++||
T Consensus 168 ~~~l~~~~~~~E~E~a~r~G~~~V~Rl~~~~~~~~~~~~~~~~~~l~~~~~G~~~~L~~~~~~~p~~~------~~~~eV 241 (795)
T 3slk_A 168 LPALPGVLACGEPQLALRRGGAHAPRLAGLGSDDVLPVPDGTGWRLEATRPGSLDGLALVDEPTATAP------LGDGEV 241 (795)
T ss_dssp HHHHHHHHHTCCSEEEECSSCEECCEEEESCSSCCCCCCCSSSCCEEESSTTSSTTEEECCCHHHHSC------CCSSEE
T ss_pred HHHHHHhccCCCceEEEECCcEEEeeeeccccccccCCCCCceEEEecCCCCCccceEEEeCCccCCC------CCCCEE
Confidence 111222222233345889998655554432211 11112235688899999999999998865433 799999
Q ss_pred EEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---------eCCCeEEEeecCCcccceEEecccc
Q psy1119 460 IAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR---------DSGKRVMGLTSGRSLANCCETDVEM 530 (1392)
Q Consensus 460 lV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~---------~vGdrV~gl~~~g~~a~~v~~~~~~ 530 (1392)
+|||+|+|||++|++++.|.++. +.++|||++|+|+ ++||||+++.. |+|++|+++++..
T Consensus 242 lV~V~a~gin~~D~~~~~G~~~~----------~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~~~~-G~~ae~~~v~~~~ 310 (795)
T 3slk_A 242 RIAMRAAGVNFRDALIALGMYPG----------VASLGSEGAGVVVETGPGVTGLAPGDRVMGMIP-KAFGPLAVADHRM 310 (795)
T ss_dssp EEEEEEEEECHHHHHHTTTCCSS----------CCCSCCCEEEEEEEECSSCCSSCTTCEEEECCS-SCSSSEEEEETTS
T ss_pred EEEEEEEccCHHHHHHHcCCCCC----------CccccceeEEEEEEeCCCCCcCCCCCEEEEEec-CCCcCEEEeehHH
Confidence 99999999999999999998753 4579999999997 47899999765 8999999999999
Q ss_pred eEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHC
Q psy1119 531 AWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTF 610 (1392)
Q Consensus 531 ~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~ 610 (1392)
++++|+++|+++||++|++++||||++.+.+++++|++||||||+|+||++++|+|+++||+||+|++++ |+++++
T Consensus 311 ~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l~--- 386 (795)
T 3slk_A 311 VTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAVE--- 386 (795)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGSC---
T ss_pred EEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhhh---
Confidence 9999999999999999999999999999999999999999999999999999999999999999999765 766553
Q ss_pred CCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEE
Q psy1119 611 PFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFH 690 (1392)
Q Consensus 611 p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~ 690 (1392)
+++++++|+++.+|.+.+++.|+|+|+|+|||+++++.++.+++||+++|||+++|+.+......+ ....++++|.
T Consensus 387 --lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~l~~~Gr~v~iG~~~~~~~~~~--~~~~~~~~~~ 462 (795)
T 3slk_A 387 --LSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKTDVRDPVEV--ADAHPGVSYQ 462 (795)
T ss_dssp --SCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECCCTTTTHHHHTSCTTCEEEEECCSTTCCCHHHH--HHHSSSEEEE
T ss_pred --cChhheeecCChhHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHhcCCCEEEEeccccccCcccc--cccCCCCEEE
Confidence 789999999999999999999999999999999999999999999999999999998765433222 2234789999
Q ss_pred EEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEecCCCCccccCCccccc
Q psy1119 691 GVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEPTKICTPKVKQL 770 (1392)
Q Consensus 691 g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~~~~~~~~~~~~~~~ 770 (1392)
++++. ...+......+..+.+++++|+++|++.++|+++++++||++|+++++.||+||++++
T Consensus 463 ~~~l~---~~~~~~~~~~l~~~~~l~~~g~l~p~~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~~-------------- 525 (795)
T 3slk_A 463 AFDTV---EAGPQRIGEMLHELVELFEGRVLEPLPVTAWDVRQAPEALRHLSQARHVGKLVLTMPP-------------- 525 (795)
T ss_dssp ECCGG---GGHHHHHHHHHHHHHHHHHTTSCCCCCEEEEEGGGHHHHHHHHHHTCCCBEEEEECCC--------------
T ss_pred Eeecc---ccCHHHHHHHHHHHHHHHHcCCcCCCcceeEcHHHHHHHHHHHhcCCccceEEEecCc--------------
Confidence 88753 2335555677788889999999999999999999999999999999999999998732
Q ss_pred ccCCccccCCCCeEEEEcCcchHHHHHHHHHH-HhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHH
Q psy1119 771 LAVPRYYADSNKSYIICGGLGGFGLELADWLV-LRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGV 849 (1392)
Q Consensus 771 ~~~~~~~~~~~~~ylItGG~gGiG~~lA~~La-~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v 849 (1392)
.++++++||||||+||||+++|+||+ ++||++|++++|++...+..++.+++++..|+++.+++|||+|++++
T Consensus 526 ------~~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v 599 (795)
T 3slk_A 526 ------VWDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETL 599 (795)
T ss_dssp ------CCCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHH
T ss_pred ------ccccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHH
Confidence 14678999999999999999999999 79999999999997766667778888999999999999999999999
Q ss_pred HHHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCCh
Q psy1119 850 VNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQT 929 (1392)
Q Consensus 850 ~~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~ 929 (1392)
+++++++.+..|||+||||||++.++++.++|.++|++++++|+.|+|+|++++.+ .+ +||+|||+++..|++||+
T Consensus 600 ~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~---~l-~iV~~SS~ag~~g~~g~~ 675 (795)
T 3slk_A 600 AKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP---DV-ALVLFSSVSGVLGSGGQG 675 (795)
T ss_dssp HHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT---TS-EEEEEEETHHHHTCSSCH
T ss_pred HHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh---CC-EEEEEccHHhcCCCCCCH
Confidence 99999984334999999999999999999999999999999999999999999844 44 999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCeEEEEccccCccccccchhh-hhHHHHHcCccccchhhhHHHHHHHHccCCCeEE
Q psy1119 930 NYGMANSIMERICEARRAEGLPGLAVEWGAVGEVGLVADMAE-DNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVA 1005 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~Glp~~ai~~g~~~~~G~~~~~~~-~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~~~~~ 1005 (1392)
+|+|+|+|+++|+++|+..|+++.+|+||.|.+.||..+... ....+...|..++...+.++.++.++..+.+.+.
T Consensus 676 ~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g~~~l~~~e~~~~~~~~l~~~~~~~~ 752 (795)
T 3slk_A 676 NYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPISTEEGLSQFDAACGGAHTVVA 752 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTTBCCCCHHHHHHHHHHHHTSSCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhcCCCCCCHHHHHHHHHHHHhCCCcEEE
Confidence 999999999999999999999999999999999998776432 2334566788888999999999999987766543
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-42 Score=405.60 Aligned_cols=312 Identities=23% Similarity=0.355 Sum_probs=270.2
Q ss_pred eeEeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEE
Q psy1119 423 AYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSG 502 (1392)
Q Consensus 423 ~~l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sG 502 (1392)
..+....+|.++.+++.+.|.|. +++|||+|||.|+|||+.|++++.|.++.. ...|.++|||++|
T Consensus 23 kA~~~~~~g~~~~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~------~~~p~v~G~E~~G 88 (342)
T 4eye_A 23 KAIQAQSLSGPEGLVYTDVETPG--------AGPNVVVVDVKAAGVCFPDYLMTKGEYQLK------MEPPFVPGIETAG 88 (342)
T ss_dssp EEEEECSSSGGGGEEEEEEECCC--------CCTTCEEEEEEEEECCHHHHHHHTTCSSSC------CCSSBCCCSEEEE
T ss_pred EEEEEecCCCCceeEEEeCCCCC--------CCCCEEEEEEEEEecCHHHHHHhcCCCCCC------CCCCCccceeEEE
Confidence 44666778888899999999876 699999999999999999999999987532 1247899999999
Q ss_pred EEee--------CCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcC
Q psy1119 503 RLRD--------SGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAG 574 (1392)
Q Consensus 503 vV~~--------vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga 574 (1392)
+|++ +||||+++...|+|+||+.+++..++++|+++++++||+++++++|||+++...+++++|++|||+||
T Consensus 89 ~V~~vG~~v~~~vGDrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga 168 (342)
T 4eye_A 89 VVRSAPEGSGIKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGA 168 (342)
T ss_dssp EEEECCTTSSCCTTCEEEEECSSCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred EEEEECCCCCCCCCCEEEEecCCCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 9974 68999999878999999999999999999999999999999999999999998999999999999999
Q ss_pred CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHH
Q psy1119 575 SGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQAS 654 (1392)
Q Consensus 575 ~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s 654 (1392)
+|++|++++|+|++.|++|+++++++++++++++ ++++++++++ .++.+.+++.++++|+|+|||+++++.+..+
T Consensus 169 sg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~~~~~~~ 243 (342)
T 4eye_A 169 AGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS----VGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGGPAFDDA 243 (342)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC--CHHHH
T ss_pred CCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCcEEecCc-hhHHHHHHHHhCCCCceEEEECCchhHHHHH
Confidence 9999999999999999999999999999999987 5789999998 8899999999999999999999999999999
Q ss_pred HhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccH
Q psy1119 655 VRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKV 734 (1392)
Q Consensus 655 ~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev 734 (1392)
+++++++|+++.+|.............++.+++++.|+.+..+....++.....+..+.+++++| ++|+++++|+++++
T Consensus 244 ~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~i~~~~~l~~~ 322 (342)
T 4eye_A 244 VRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPPVSARIPLSEG 322 (342)
T ss_dssp HHTEEEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCCCEEEEEEGGGH
T ss_pred HHhhcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCCCcceEEeHHHH
Confidence 99999999999999654322222223467899999999877665555555566777788899999 99999999999999
Q ss_pred HHHHHHHHcCCccceEEEEe
Q psy1119 735 EEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 735 ~eA~~~l~~g~~~GKvVI~~ 754 (1392)
++||+.+.+++..||+||++
T Consensus 323 ~~A~~~~~~~~~~gKvvl~P 342 (342)
T 4eye_A 323 RQALQDFADGKVYGKMVLVP 342 (342)
T ss_dssp HHHHHHHHTTCCCSEEEEEC
T ss_pred HHHHHHHHhCCCCceEEEeC
Confidence 99999999999999999874
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=401.73 Aligned_cols=313 Identities=23% Similarity=0.410 Sum_probs=273.8
Q ss_pred eeEeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEE
Q psy1119 423 AYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSG 502 (1392)
Q Consensus 423 ~~l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sG 502 (1392)
..+....+|.++.+++.+.|.|. ++++||+|||.|+|||+.|++.+.|.++.. ...|.++|||++|
T Consensus 30 kA~~~~~~g~~~~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~------~~~p~i~G~E~~G 95 (353)
T 4dup_A 30 RFVDLKSFGGPDVMVIGKRPLPV--------AGEGEVLVRAEAIGVNRPDIAQRQGSYPPP------KDASPILGLELSG 95 (353)
T ss_dssp EEEEESSSSSGGGEEEEEECCCC--------CCTTEEEEEEEEEEECHHHHHHHTTSSCCC------TTSCSSSCCEEEE
T ss_pred eEEEEccCCCccceEEEeccCCC--------CCCCEEEEEEEEEecCHHHHHHhCCCCCCC------CCCCCccccccEE
Confidence 44566778888999999999875 799999999999999999999999987532 1237899999999
Q ss_pred EEe---------eCCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEc
Q psy1119 503 RLR---------DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHA 573 (1392)
Q Consensus 503 vV~---------~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~g 573 (1392)
+|+ ++||||+++...|+|+||+.+|++.++++|+++++++||+++++++|||+++...+++++|++|||+|
T Consensus 96 ~V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G 175 (353)
T 4dup_A 96 EIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHG 175 (353)
T ss_dssp EEEEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESS
T ss_pred EEEEECCCCCCCCCCCEEEEecCCCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEc
Confidence 997 47899999988899999999999999999999999999999999999999998899999999999999
Q ss_pred CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHH
Q psy1119 574 GSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQA 653 (1392)
Q Consensus 574 a~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~ 653 (1392)
|+|++|++++|+|+..|++|++++++++|++++++ +++++++|+++.++.+.+++.+ ++|+|+|||+.+++.+..
T Consensus 176 g~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~~~~~ 250 (353)
T 4dup_A 176 GTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER----LGAKRGINYRSEDFAAVIKAET-GQGVDIILDMIGAAYFER 250 (353)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHH-SSCEEEEEESCCGGGHHH
T ss_pred CCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCCEEEeCCchHHHHHHHHHh-CCCceEEEECCCHHHHHH
Confidence 99999999999999999999999999999999987 6789999999999999999999 789999999999999999
Q ss_pred HHhcccCCeEEEEEcccccccCcccc-ccccCCCcEEEEEechhhhh-hCHHHHHHHHHHHHHHHHcCCCCCcceeeecc
Q psy1119 654 SVRCLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVMLDNFFF-AEQEWKMSLQKALQKAIDAGAVQPLVRTIFPE 731 (1392)
Q Consensus 654 s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l 731 (1392)
++++++++|+++.+|.........++ ..++.+++++.|+.+..... ..+.....+.+.+.+++++|+++|+++++|++
T Consensus 251 ~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l 330 (353)
T 4dup_A 251 NIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAF 330 (353)
T ss_dssp HHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCCEEEEEEG
T ss_pred HHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCCcceEEeH
Confidence 99999999999999975433222122 24567899999987655332 22344455567778899999999999999999
Q ss_pred ccHHHHHHHHHcCCccceEEEEe
Q psy1119 732 DKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 732 ~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+++++||+.+.+++..||+||++
T Consensus 331 ~~~~~A~~~l~~~~~~gKvvl~~ 353 (353)
T 4dup_A 331 EDVADAHRLLEEGSHVGKVMLTV 353 (353)
T ss_dssp GGHHHHHHHHHHTCCSSEEEEEC
T ss_pred HHHHHHHHHHHhCCCCceEEEeC
Confidence 99999999999999999999875
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=392.51 Aligned_cols=311 Identities=18% Similarity=0.233 Sum_probs=273.3
Q ss_pred eeEeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEE
Q psy1119 423 AYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSG 502 (1392)
Q Consensus 423 ~~l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sG 502 (1392)
..+....+|.++.+++.+.|.|. ++++||+|||.|+|||+.|++++.|.++.. .|.++|||++|
T Consensus 10 ka~~~~~~g~~~~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~--------~P~i~G~e~~G 73 (334)
T 3qwb_A 10 KVILIDEIGGYDVIKYEDYPVPS--------ISEEELLIKNKYTGVNYIESYFRKGIYPCE--------KPYVLGREASG 73 (334)
T ss_dssp EEEEESSSSSGGGEEEEEEECCC--------CCTTEEEEEEEEEECCTTHHHHHHTSSCCC--------SSEECCSEEEE
T ss_pred EEEEEecCCCCceeEEEeccCCC--------CCCCEEEEEEEEEecCHHHHHHHCCCCCCC--------CCCccccceEE
Confidence 34566678888889999988875 799999999999999999999999987532 37899999999
Q ss_pred EEe---------eCCCeEEEeecCCcccceEEec-ccceEEcCCCCCHhh---HhhhhHHHHHHHHHHHHhcCCCCCCEE
Q psy1119 503 RLR---------DSGKRVMGLTSGRSLANCCETD-VEMAWEIPDQWTLED---AATVPCVYATAVYAMFICGQMQKGESI 569 (1392)
Q Consensus 503 vV~---------~vGdrV~gl~~~g~~a~~v~~~-~~~~~~iPd~ls~e~---AA~lp~~~~TA~~aL~~~a~l~~GetV 569 (1392)
+|+ ++||||+++. .|+|++|+.++ +..++++|+++++++ ||+++++++|||+++...+++++|++|
T Consensus 74 ~V~~vG~~v~~~~~GdrV~~~~-~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~v 152 (334)
T 3qwb_A 74 TVVAKGKGVTNFEVGDQVAYIS-NSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYV 152 (334)
T ss_dssp EEEEECTTCCSCCTTCEEEEEC-SSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEE
T ss_pred EEEEECCCCCCCCCCCEEEEee-CCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEE
Confidence 997 4689999876 58999999999 999999999999999 899999999999999888899999999
Q ss_pred EEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchh
Q psy1119 570 LIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEE 649 (1392)
Q Consensus 570 LI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~ 649 (1392)
||+||+|++|++++|+|+..|++|++++++++|++++++ +++++++|+++.++.+.+++.++++|+|+|||+.+++
T Consensus 153 lV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~ 228 (334)
T 3qwb_A 153 LLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE----YGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKD 228 (334)
T ss_dssp EESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGGG
T ss_pred EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCChH
Confidence 999999999999999999999999999999999998876 6889999999999999999999999999999999999
Q ss_pred HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeee
Q psy1119 650 KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIF 729 (1392)
Q Consensus 650 ~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf 729 (1392)
.++.++++++++|+++.+|.............++.+++++.++.+..+.. .++.....++.+.+++.+|++++.++++|
T Consensus 229 ~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~l~~~i~~~~ 307 (334)
T 3qwb_A 229 TFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIA-DPEEWKYYSDEFFGLVNSKKLNIKIYKTY 307 (334)
T ss_dssp GHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSC-SHHHHHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred HHHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccC-CHHHHHHHHHHHHHHHHCCCccCceeeEE
Confidence 99999999999999999997543222222234567899999887666543 34444556677788999999999999999
Q ss_pred ccccHHHHHHHHHcCCccceEEEEec
Q psy1119 730 PEDKVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 730 ~l~ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
+++++++||+.+.+++..||+||+++
T Consensus 308 ~l~~~~~A~~~~~~~~~~gKvvi~~~ 333 (334)
T 3qwb_A 308 PLRDYRTAAADIESRKTVGKLVLEIP 333 (334)
T ss_dssp EGGGHHHHHHHHHTTCCCBEEEEECC
T ss_pred cHHHHHHHHHHHHhCCCceEEEEecC
Confidence 99999999999999999999999875
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=391.82 Aligned_cols=309 Identities=17% Similarity=0.185 Sum_probs=267.6
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
+....+|.++.|++.+.|.|. ++++||+|||.|+|||+.|++++.|.++.. ..|.++|||++|+|
T Consensus 5 ~~~~~~g~~~~l~~~~~~~p~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-------~~p~v~G~e~~G~V 69 (325)
T 3jyn_A 5 IQFSTVGGPEVLEYVDFEPEA--------PGPQAVVVRNKAIGLNFIDTYYRSGLYPAP-------FLPSGLGAEGAGVV 69 (325)
T ss_dssp EEBSSCSSGGGCEEEEECCCC--------CCTTEEEEEEEEEECCHHHHHHHHTSSCCS-------SSSBCCCCCEEEEE
T ss_pred EEEecCCCcceeEEeecCCCC--------CCCCEEEEEEEEEecCHHHHHHHCCCCCCC-------CCCCCCCceeEEEE
Confidence 456678888899999999875 789999999999999999999999987642 23789999999999
Q ss_pred e---------eCCCeEEEee-cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcC
Q psy1119 505 R---------DSGKRVMGLT-SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAG 574 (1392)
Q Consensus 505 ~---------~vGdrV~gl~-~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga 574 (1392)
+ ++||||++.. ..|+|+||+.+|++.++++|+++++++||++++.++|||+++...+++++|++|||+||
T Consensus 70 ~~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga 149 (325)
T 3jyn_A 70 EAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAA 149 (325)
T ss_dssp EEECTTCCSCCTTCEEEESSSSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred EEECCCCCCCCCCCEEEEecCCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 7 4789998865 46899999999999999999999999999999999999999998899999999999999
Q ss_pred CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHH
Q psy1119 575 SGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQAS 654 (1392)
Q Consensus 575 ~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s 654 (1392)
+|++|++++|+|+..|++|++++++++|++++++ +++++++|+++.++.+.+++.|+++|+|+|||+.+++.+..+
T Consensus 150 ~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~ 225 (325)
T 3jyn_A 150 AGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA----LGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTS 225 (325)
T ss_dssp TSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCGGGHHHH
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCChHHHHHH
Confidence 9999999999999999999999999999999986 578999999999999999999999999999999999999999
Q ss_pred HhcccCCeEEEEEcccccccCccccc-cccCC-CcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccc
Q psy1119 655 VRCLAQGGRFLEIGKFDLANNNMLGM-EVFMR-ETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPED 732 (1392)
Q Consensus 655 ~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k-~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ 732 (1392)
+++++++|+++.+|...... ..+.. .++.+ ++++.+..+..+.. .++...+.++.+.+++++|++++.++++|+++
T Consensus 226 ~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~ 303 (325)
T 3jyn_A 226 LDSVAPRGLVVSFGNASGPV-SGVNLGILAQKDSVYVTRPTLGSYAN-NAQNLQTMADELFDMLASGKLKVDGIEQYALK 303 (325)
T ss_dssp HTTEEEEEEEEECCCTTCCC-CSCCTHHHHHTTSCEEECCCHHHHSC-STTHHHHHHHHHHHHHHTTSSCCCCCEEEEGG
T ss_pred HHHhcCCCEEEEEecCCCCC-CCCCHHHHhhcCcEEEEeeeeeeecC-CHHHHHHHHHHHHHHHHCCCeeCccccEEcHH
Confidence 99999999999999764321 12222 23334 56777665555433 23344556667788999999999989999999
Q ss_pred cHHHHHHHHHcCCccceEEEEe
Q psy1119 733 KVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 733 ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
++++||+.+.++++.||+||.+
T Consensus 304 ~~~~A~~~~~~~~~~Gkvvl~p 325 (325)
T 3jyn_A 304 DAAKAQIELSARRTTGSTILIP 325 (325)
T ss_dssp GHHHHHHHHHTTCCCSCEEEEC
T ss_pred HHHHHHHHHHcCCCCceEEEeC
Confidence 9999999999999999999864
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-40 Score=388.70 Aligned_cols=317 Identities=17% Similarity=0.177 Sum_probs=266.7
Q ss_pred eEeeccCCCC-CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEE
Q psy1119 424 YINALVRGDM-SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSG 502 (1392)
Q Consensus 424 ~l~~~~~G~l-~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sG 502 (1392)
.+....+|.+ +.|++.+.|.|. ++++||+|||+|+|||+.|++.+.|.++.. ...|.++|||++|
T Consensus 7 a~~~~~~g~p~~~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~------~~~p~i~G~E~~G 72 (340)
T 3gms_A 7 LIQFHKFGNPKDVLQVEYKNIEP--------LKDNEVFVRMLVRPINPSDLIPITGAYAHR------IPLPNIPGYEGVG 72 (340)
T ss_dssp EEEESSCSCHHHHEEEEEEECCC--------CCTTEEEEEEEEEECCHHHHGGGGTTTTTT------SCSSBCCCSCCEE
T ss_pred EEEEecCCCchheEEEEecCCCC--------CCCCEEEEEEEEecCCHHHHHHhcCCCCCC------CCCCCcCCcceEE
Confidence 3455667876 678999988875 789999999999999999999999986532 2347899999999
Q ss_pred EEe---------eCCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEc
Q psy1119 503 RLR---------DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHA 573 (1392)
Q Consensus 503 vV~---------~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~g 573 (1392)
+|+ ++||||+++...|+|+||+.+|++.++++|+++|+++||++++.++|||+++...+++++|++|||+|
T Consensus 73 ~V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G 152 (340)
T 3gms_A 73 IVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNA 152 (340)
T ss_dssp EEEEECTTSCGGGTTCEEEECSSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESS
T ss_pred EEEEeCCCCCCCCCCCEEEecCCCccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeC
Confidence 997 47899999877899999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHH
Q psy1119 574 GSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQA 653 (1392)
Q Consensus 574 a~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~ 653 (1392)
|+|++|++++|+|+..|++|+++++++++++++++ +++++++|+++.++.+.+++.|+++|+|+|||++++.....
T Consensus 153 a~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~ 228 (340)
T 3gms_A 153 CGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR----LGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNE 228 (340)
T ss_dssp TTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCHHHHHH
T ss_pred CccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----CCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCChhHHH
Confidence 98999999999999999999999999999999987 67899999999999999999999999999999999988888
Q ss_pred HHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhh-hCHHHHHHHHHHHHHHHHcCCCCC-cceeeecc
Q psy1119 654 SVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFF-AEQEWKMSLQKALQKAIDAGAVQP-LVRTIFPE 731 (1392)
Q Consensus 654 s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~l~p-l~~~vf~l 731 (1392)
++++|+++|+++.+|......... .......++++..+.+..+.. ..+......++.+.+++++|++++ .++++|++
T Consensus 229 ~~~~l~~~G~iv~~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~i~~~~~l 307 (340)
T 3gms_A 229 LAFSLRPNGHFLTIGLLSGIQVNW-AEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHSTYEL 307 (340)
T ss_dssp HHHTEEEEEEEEECCCTTSCCCCH-HHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEEG
T ss_pred HHHHhcCCCEEEEEeecCCCCCCH-HHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCccccccEEEeH
Confidence 889999999999999754321111 111113566777665544322 223344556677788999999998 57899999
Q ss_pred ccHHHHHHHHHcCCcc-ceEEEEecCCCC
Q psy1119 732 DKVEEAFRYMAAGKHI-GKVIIKIRDEEP 759 (1392)
Q Consensus 732 ~ev~eA~~~l~~g~~~-GKvVI~~~~~~~ 759 (1392)
+++++||+.+.++++. |||||++.++++
T Consensus 308 ~~~~~A~~~~~~~~~~~GKvvl~~~~~~~ 336 (340)
T 3gms_A 308 ADVKAAVDVVQSAEKTKGKVFLTSYEGHH 336 (340)
T ss_dssp GGHHHHHHHHHCTTCCSSEEEEECC----
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEEecccc
Confidence 9999999999999865 999999987643
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=389.28 Aligned_cols=300 Identities=21% Similarity=0.295 Sum_probs=257.6
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
+....+ .++.+++.+.|.|. ++++||+|||+|+|||+.|++++.|.++.. ...|.++|||++|+|
T Consensus 31 ~~~~~~-~~~~l~~~e~p~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~------~~~P~v~GhE~~G~V 95 (363)
T 3uog_A 31 WSTETV-APHDLKLAERPVPE--------AGEHDIIVRTLAVSLNYRDKLVLETGMGLD------LAFPFVPASDMSGVV 95 (363)
T ss_dssp EEBSCT-TTTCCEEEEEECCC--------CCTTEEEEEEEEEECCHHHHHHHHHCTTCC------CCSSBCCCCEEEEEE
T ss_pred EEEccC-CCCCcEEEeeeCCC--------CCCCEEEEEEEEEecCHHHHHHhcCCCCCC------CCCCcCcccceEEEE
Confidence 344444 56789999998875 799999999999999999999999876532 224789999999999
Q ss_pred e---------eCCCeEEEee------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHH
Q psy1119 505 R---------DSGKRVMGLT------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYA 551 (1392)
Q Consensus 505 ~---------~vGdrV~gl~------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~ 551 (1392)
+ ++||||++.. ..|+|+||+.+|+..++++|+++|+++||+++++++
T Consensus 96 ~~vG~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 175 (363)
T 3uog_A 96 EAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGL 175 (363)
T ss_dssp EEECTTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHH
T ss_pred EEECCCCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHH
Confidence 7 4789998861 248999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHH
Q psy1119 552 TAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVM 631 (1392)
Q Consensus 552 TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~ 631 (1392)
|||+++...+++++|++|||+| +|++|++++|+|+++|++|++++++++|++++++ +|+++++|..+.++.+.++
T Consensus 176 ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~v~ 250 (363)
T 3uog_A 176 TAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA----LGADHGINRLEEDWVERVY 250 (363)
T ss_dssp HHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HTCSEEEETTTSCHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH----cCCCEEEcCCcccHHHHHH
Confidence 9999998889999999999998 7999999999999999999999999999999876 6789999966688999999
Q ss_pred HHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHH
Q psy1119 632 KRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKA 711 (1392)
Q Consensus 632 ~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~ 711 (1392)
+.|+++|+|+|||+++++.+..++++++++|+++.+|.............++.+++++.|+.... . ..+..
T Consensus 251 ~~~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~-----~----~~~~~ 321 (363)
T 3uog_A 251 ALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGH-----R----RALED 321 (363)
T ss_dssp HHHTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCC-----H----HHHHH
T ss_pred HHhCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCC-----H----HHHHH
Confidence 99999999999999998899999999999999999997643222222234567899999986543 2 23344
Q ss_pred HHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 712 LQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 712 ~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+.+++++|.++|+++++|+++++++||+.+.+++ .||+||++
T Consensus 322 ~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~ 363 (363)
T 3uog_A 322 LVGAVDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF 363 (363)
T ss_dssp HHHHHHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred HHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence 5567788899999999999999999999999999 99999975
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=387.16 Aligned_cols=311 Identities=23% Similarity=0.385 Sum_probs=256.8
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
+....+|.++.+++.+.|.|. ++++||+|||.|+|||+.|++.+.|.++.. ...|.++|||++|+|
T Consensus 7 ~~~~~~g~~~~l~~~~~~~p~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~------~~~p~v~G~e~~G~V 72 (349)
T 4a27_A 7 VVLAGFGGLNKLRLFRKAMPE--------PQDGELKIRVKACGLNFIDLMVRQGNIDNP------PKTPLVPGFECSGIV 72 (349)
T ss_dssp EEECSSSSGGGEEEEEECCCC--------CCTTEEEEEEEEEEECHHHHHHHHTCSSSC------CCSSBCCCSEEEEEE
T ss_pred EEEccCCCcceeEEEecCCCC--------CCCCEEEEEEEEEecCHHHHHHhCCCcCCC------CCCCccccceeEEEE
Confidence 455668888889999999876 799999999999999999999999986532 124789999999999
Q ss_pred e---------eCCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCC
Q psy1119 505 R---------DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGS 575 (1392)
Q Consensus 505 ~---------~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~ 575 (1392)
+ ++||||+++...|+|+||+.+++..++++|+++|+++||+++++++|||+++.+.+++++|++|||+||+
T Consensus 73 ~~vG~~v~~~~~GdrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~ 152 (349)
T 4a27_A 73 EALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAG 152 (349)
T ss_dssp EEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTT
T ss_pred EEeCCCCCCCCCCCEEEEecCCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence 7 4799999998889999999999999999999999999999999999999999889999999999999999
Q ss_pred chHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHH
Q psy1119 576 GGVGQAAINLARYMD-AEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQAS 654 (1392)
Q Consensus 576 GgVG~aaIqlA~~~G-a~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s 654 (1392)
|++|++++|+|+++| ++|++++ +++|+++++ +++++++| ++.++.+.+++.++ +|+|+|||+++++.++.+
T Consensus 153 G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga~~~~~-~~~~~~~~~~~~~~-~g~Dvv~d~~g~~~~~~~ 224 (349)
T 4a27_A 153 GGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSVTHLFD-RNADYVQEVKRISA-EGVDIVLDCLCGDNTGKG 224 (349)
T ss_dssp SHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGSSEEEE-TTSCHHHHHHHHCT-TCEEEEEEECC-------
T ss_pred cHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCCcEEEc-CCccHHHHHHHhcC-CCceEEEECCCchhHHHH
Confidence 999999999999995 6888887 567887775 46899999 88899999999875 699999999998888999
Q ss_pred HhcccCCeEEEEEcccccccCc----------------cccccccCCCcEEEEEechhhhhhC--HHHHHHHHHHHHHHH
Q psy1119 655 VRCLAQGGRFLEIGKFDLANNN----------------MLGMEVFMRETSFHGVMLDNFFFAE--QEWKMSLQKALQKAI 716 (1392)
Q Consensus 655 ~~~La~~Gr~v~iG~~~~~~~~----------------~l~~~~~~k~~s~~g~~~~~~~~~~--~~~~~~~~~~~~~~l 716 (1392)
+++++++||++.+|........ .....++.+++++.|+.+..+.... .......++.+.+++
T Consensus 225 ~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~ 304 (349)
T 4a27_A 225 LSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLY 304 (349)
T ss_dssp CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHH
Confidence 9999999999999965321111 1122345678899998775544332 234456677778899
Q ss_pred HcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEecCC
Q psy1119 717 DAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDE 757 (1392)
Q Consensus 717 ~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~~ 757 (1392)
++|+++|+++++|+++++++||+.+.+++..||+||+++++
T Consensus 305 ~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~~ 345 (349)
T 4a27_A 305 NQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT 345 (349)
T ss_dssp HTTSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTCC
T ss_pred HCCCccccccceECHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence 99999999999999999999999999999999999999764
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=385.95 Aligned_cols=313 Identities=25% Similarity=0.379 Sum_probs=265.0
Q ss_pred eEeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEE
Q psy1119 424 YINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGR 503 (1392)
Q Consensus 424 ~l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGv 503 (1392)
.+....+|.++.+++.+.|.|. ++++||+|||.|+|||+.|++.+.|.++.. ...|.++|||++|+
T Consensus 25 a~~~~~~g~~~~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~------~~~p~v~G~E~~G~ 90 (354)
T 2j8z_A 25 AVHFDKPGGPENLYVKEVAKPS--------PGEGEVLLKVAASALNRADLMQRQGQYDPP------PGASNILGLEASGH 90 (354)
T ss_dssp EEEESSCSSGGGEEEEEEECCC--------CCTTEEEEEEEEEECCHHHHHHHHTSSCCC------TTSCSSSCSEEEEE
T ss_pred EEEEccCCCccceEEeecCCCC--------CCCCeEEEEEEEeecCHHHHHHhCCCCCCC------CCCCcccceeeEEE
Confidence 3455678888889999988875 689999999999999999999999976532 12378999999999
Q ss_pred Eee----------CCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEc
Q psy1119 504 LRD----------SGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHA 573 (1392)
Q Consensus 504 V~~----------vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~g 573 (1392)
|++ +||||+++...|+|+||+.+|+..++++|+++|+++||+++++++|||+++...+++++|++|||+|
T Consensus 91 V~~vG~~v~~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~G 170 (354)
T 2j8z_A 91 VAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHA 170 (354)
T ss_dssp EEEECSCC--CCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESS
T ss_pred EEEECCCcCCCCCCCCEEEEecCCCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEEC
Confidence 863 5889999877799999999999999999999999999999999999999998889999999999999
Q ss_pred CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHH
Q psy1119 574 GSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQA 653 (1392)
Q Consensus 574 a~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~ 653 (1392)
|+|++|++++|+|+..|++|+++++++++++++++ +++++++|.++.++.+.+.+.++++|+|++||+.+++.+..
T Consensus 171 a~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~~~~~~ 246 (354)
T 2j8z_A 171 GLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK----LGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEK 246 (354)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCGGGHHH
T ss_pred CccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCchHHHH
Confidence 99999999999999999999999999999999865 57788999999999999999998889999999999989999
Q ss_pred HHhcccCCeEEEEEcccccccCcccc--ccccCCCcEEEEEechhhhh-hCHHHHHHHHHHHHHHHHcC---CCCCccee
Q psy1119 654 SVRCLAQGGRFLEIGKFDLANNNMLG--MEVFMRETSFHGVMLDNFFF-AEQEWKMSLQKALQKAIDAG---AVQPLVRT 727 (1392)
Q Consensus 654 s~~~La~~Gr~v~iG~~~~~~~~~l~--~~~~~k~~s~~g~~~~~~~~-~~~~~~~~~~~~~~~~l~~g---~l~pl~~~ 727 (1392)
++++++++|+++.+|...... ..++ ..++.+++++.|+.+..... ..+.....+.+.+.+++++| .++|++++
T Consensus 247 ~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~ 325 (354)
T 2j8z_A 247 NVNCLALDGRWVLYGLMGGGD-INGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDR 325 (354)
T ss_dssp HHHHEEEEEEEEECCCTTCSC-CCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEE
T ss_pred HHHhccCCCEEEEEeccCCCc-cCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccce
Confidence 999999999999999653221 1222 23457899999986543211 11222233445566788899 99999999
Q ss_pred eeccccHHHHHHHHHcCCccceEEEEec
Q psy1119 728 IFPEDKVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 728 vf~l~ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
+|+++++++||+.+.+++..||+|++++
T Consensus 326 ~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 353 (354)
T 2j8z_A 326 IYPVTEIQEAHKYMEANKNIGKIVLELP 353 (354)
T ss_dssp EEEGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred EEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 9999999999999999999999999874
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=381.71 Aligned_cols=311 Identities=23% Similarity=0.309 Sum_probs=261.8
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCC-ChhhhhhhccccccccceeeEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKL-APEVIESRRLYQHCVIGFEYSGR 503 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~-~~~~~~~~~~~~p~~lG~E~sGv 503 (1392)
+....+|.++.+++.+.|.|. ++++||+|||.|+|||+.|++++.|.+ +.. ....|.++|||++|+
T Consensus 5 ~~~~~~g~~~~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~-----~~~~p~i~G~e~~G~ 71 (333)
T 1wly_A 5 AVIHKKGGPDNFVWEEVKVGS--------PGPGQVRLRNTAIGVNFLDTYHRAGIPHPLV-----VGEPPIVVGFEAAAV 71 (333)
T ss_dssp EEESSCSSGGGEEEEECCCCC--------CCTTEEEEEEEEEEECHHHHHHHC---------------CCEECCCEEEEE
T ss_pred EEEcccCCcceeEEEeccCCC--------CCCCeEEEEEEEEecCHHHHHHhCCCcCCCC-----CCCCCccccceeEEE
Confidence 344567777889999998875 689999999999999999999999865 210 012378999999999
Q ss_pred Ee---------eCCCeEEEeec-CCcccceEEecccceEEcCCCCCHhh--HhhhhHHHHHHHHHHHHhcCCCCCCEEEE
Q psy1119 504 LR---------DSGKRVMGLTS-GRSLANCCETDVEMAWEIPDQWTLED--AATVPCVYATAVYAMFICGQMQKGESILI 571 (1392)
Q Consensus 504 V~---------~vGdrV~gl~~-~g~~a~~v~~~~~~~~~iPd~ls~e~--AA~lp~~~~TA~~aL~~~a~l~~GetVLI 571 (1392)
|+ ++||||++... .|+|+||+.+|+..++++|+++|+++ ||+++++++|||+++...+++++|++|||
T Consensus 72 V~~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV 151 (333)
T 1wly_A 72 VEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLI 151 (333)
T ss_dssp EEEECTTCCSCCTTCEEEECSSSCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEE
T ss_pred EEEECCCCCCCCCCCEEEEecCCCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEE
Confidence 97 47899987653 68999999999999999999999999 99999999999999987899999999999
Q ss_pred EcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHH
Q psy1119 572 HAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKL 651 (1392)
Q Consensus 572 ~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l 651 (1392)
+||+|++|++++|+|+..|++|+++++++++.+.+++ +++++++|.++.++.+.+.+.+.++|+|+|||+.+++.+
T Consensus 152 ~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~~~~ 227 (333)
T 1wly_A 152 HAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK----LGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTL 227 (333)
T ss_dssp TTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCTTTH
T ss_pred ECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcHHHH
Confidence 9999999999999999999999999999999999876 567889999988999999999988899999999998889
Q ss_pred HHHHhcccCCeEEEEEcccccccCccccc--cccCCC--cEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCccee
Q psy1119 652 QASVRCLAQGGRFLEIGKFDLANNNMLGM--EVFMRE--TSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRT 727 (1392)
Q Consensus 652 ~~s~~~La~~Gr~v~iG~~~~~~~~~l~~--~~~~k~--~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~ 727 (1392)
+.++++++++|+++.+|...... ..++. .++.++ +++.|+... +. ..+......++.+.+++.+|+++|++++
T Consensus 228 ~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~~~~~i~g~~~~-~~-~~~~~~~~~~~~~~~l~~~g~l~~~i~~ 304 (333)
T 1wly_A 228 QKSLDCLRPRGMCAAYGHASGVA-DPIRVVEDLGVRGSLFITRPALWH-YM-SNRSEIDEGSKCLFDAVKAGVLHSSVAK 304 (333)
T ss_dssp HHHHHTEEEEEEEEECCCTTCCC-CCCCHHHHTTTTTSCEEECCCGGG-GS-CSHHHHHHHHHHHHHHHHTTSCCCCEEE
T ss_pred HHHHHhhccCCEEEEEecCCCCc-CCCChhHhhhhcCCcEEEEEeehh-hc-cCHHHHHHHHHHHHHHHHCCCcCCCcce
Confidence 99999999999999999754221 11222 456788 898887542 22 2344445566777889999999999999
Q ss_pred eeccccHHHHHHHHHcCCccceEEEEec
Q psy1119 728 IFPEDKVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 728 vf~l~ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
+|+++++++||+.+.+++..||+|++++
T Consensus 305 ~~~l~~~~~A~~~~~~~~~~gKvvi~~~ 332 (333)
T 1wly_A 305 TFPLREAAAAHKYMGGRQTIGSIVLLPQ 332 (333)
T ss_dssp EEEGGGHHHHHHHHHHCSCCSEEEEETT
T ss_pred EEeHHHHHHHHHHHHcCCCceEEEEEeC
Confidence 9999999999999999999999999874
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-39 Score=379.37 Aligned_cols=306 Identities=17% Similarity=0.211 Sum_probs=259.3
Q ss_pred EeeccCC---CCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeE
Q psy1119 425 INALVRG---DMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYS 501 (1392)
Q Consensus 425 l~~~~~G---~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~s 501 (1392)
+....+| .++.+++.+.|.|. ++++||+|||.|+|||+.|++.+.|..+ ..|.++|||++
T Consensus 6 ~~~~~~G~~~~~~~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~---------~~p~i~G~e~~ 68 (346)
T 3fbg_A 6 IGFEQPFKLSDGNLFKTFNLDIPE--------PKVHEILVKIQSISVNPVDTKQRLMDVS---------KAPRVLGFDAI 68 (346)
T ss_dssp EEBSSCCCGGGCCCCEEEEECCCC--------CCTTEEEEEEEEEEECHHHHHHTTSCCS---------SSCBCCCCCEE
T ss_pred EEEEeccccCCCceeEeccccCCC--------CCCCEEEEEEEEEEcCHHHHHHHhCCCC---------CCCcCcCCccE
Confidence 4455677 67889999999886 6899999999999999999999988732 23789999999
Q ss_pred EEEe---------eCCCeEEEee---cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCC-----
Q psy1119 502 GRLR---------DSGKRVMGLT---SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQ----- 564 (1392)
Q Consensus 502 GvV~---------~vGdrV~gl~---~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~----- 564 (1392)
|+|+ ++||||+++. ..|+|+||+.+|++.++++|+++|+++||++|++++|||+++...++++
T Consensus 69 G~V~~vG~~v~~~~~GdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~ 148 (346)
T 3fbg_A 69 GVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNE 148 (346)
T ss_dssp EEEEEECTTCCSCCTTCEEEECCCTTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHH
T ss_pred EEEEEeCCCCCcCCCCCEEEEcCCCCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCcccccc
Confidence 9997 4689999864 3689999999999999999999999999999999999999999899998
Q ss_pred -CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEE
Q psy1119 565 -KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVL 643 (1392)
Q Consensus 565 -~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVl 643 (1392)
+|++|||+||+|++|++++|+|++.|++|++++++++|++++++ +++++++++++ ++.+.+++. .++|+|+||
T Consensus 149 ~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~-~~~~~~~~~-~~~g~Dvv~ 222 (346)
T 3fbg_A 149 NEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK----MGADIVLNHKE-SLLNQFKTQ-GIELVDYVF 222 (346)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH----HTCSEEECTTS-CHHHHHHHH-TCCCEEEEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCcEEEECCc-cHHHHHHHh-CCCCccEEE
Confidence 99999999999999999999999999999999999999999987 67899999875 688888887 678999999
Q ss_pred ecCchh-HHHHHHhcccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhh--h-hhCHHHHHHHHHHHHHHHHc
Q psy1119 644 NSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNF--F-FAEQEWKMSLQKALQKAIDA 718 (1392)
Q Consensus 644 ds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~--~-~~~~~~~~~~~~~~~~~l~~ 718 (1392)
|++++. .++.++++|+++|+++.+|.... .+.+ .++.+++++.+..+... + ........+.+..+.+++++
T Consensus 223 d~~g~~~~~~~~~~~l~~~G~iv~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 298 (346)
T 3fbg_A 223 CTFNTDMYYDDMIQLVKPRGHIATIVAFEN----DQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQ 298 (346)
T ss_dssp ESSCHHHHHHHHHHHEEEEEEEEESSCCSS----CBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHT
T ss_pred ECCCchHHHHHHHHHhccCCEEEEECCCCC----CCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHC
Confidence 999875 57999999999999999885321 2222 44568899998654331 1 11233445667778889999
Q ss_pred CCCCCcceeee---ccccHHHHHHHHHcCCccceEEEEecCC
Q psy1119 719 GAVQPLVRTIF---PEDKVEEAFRYMAAGKHIGKVIIKIRDE 757 (1392)
Q Consensus 719 g~l~pl~~~vf---~l~ev~eA~~~l~~g~~~GKvVI~~~~~ 757 (1392)
|+++|.++++| +++++++||+.+.++++.||+||+++++
T Consensus 299 g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~~ 340 (346)
T 3fbg_A 299 NIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNEG 340 (346)
T ss_dssp TSSCCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC---
T ss_pred CCEECCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCCc
Confidence 99999988888 8999999999999999999999999764
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-39 Score=379.40 Aligned_cols=307 Identities=22% Similarity=0.359 Sum_probs=262.4
Q ss_pred EeeccCCCCCCceE-EeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEE
Q psy1119 425 INALVRGDMSSLTW-EQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGR 503 (1392)
Q Consensus 425 l~~~~~G~l~~l~~-~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGv 503 (1392)
+....+|.++.+++ .+.|.|. ++++||+|||.|+|||+.|++++.|.++.. ...|.++|||++|+
T Consensus 33 ~~~~~~g~~~~l~~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~------~~~P~v~G~E~~G~ 98 (351)
T 1yb5_A 33 VRVFEFGGPEVLKLRSDIAVPI--------PKDHQVLIKVHACGVNPVETYIRSGTYSRK------PLLPYTPGSDVAGV 98 (351)
T ss_dssp EEESSCSSGGGEEEEEEEECCC--------CCTTEEEEEEEEEECCHHHHHHHHTCSSCC------CCSSBCCCSCEEEE
T ss_pred EEEccCCCcceeEEeeecCCCC--------CCCCEEEEEEEEEecCHHHHHHhCCCCCCC------CCCCCcCCceeEEE
Confidence 44556787888999 7888775 689999999999999999999999976421 12478999999999
Q ss_pred Ee---------eCCCeEEEeec-CCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEc
Q psy1119 504 LR---------DSGKRVMGLTS-GRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHA 573 (1392)
Q Consensus 504 V~---------~vGdrV~gl~~-~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~g 573 (1392)
|+ ++||||++... .|+|+||+.+|+..++++|+++|+++||+++++++|||+++...+++++|++|||+|
T Consensus 99 V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~G 178 (351)
T 1yb5_A 99 IEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHG 178 (351)
T ss_dssp EEEECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEET
T ss_pred EEEECCCCCCCCCCCEEEEeCCCCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEEC
Confidence 97 47899988753 589999999999999999999999999999999999999998889999999999999
Q ss_pred CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHH
Q psy1119 574 GSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQA 653 (1392)
Q Consensus 574 a~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~ 653 (1392)
|+|++|++++|+|+..|++|+++++++++++++++ +++++++|.++.++.+.+++.++++|+|+|||+.+++.+..
T Consensus 179 asggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~~~~~~ 254 (351)
T 1yb5_A 179 ASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ----NGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSK 254 (351)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHH
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----cCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCChHHHHH
Confidence 99999999999999999999999999999998875 67889999998899999999998889999999999888999
Q ss_pred HHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeecccc
Q psy1119 654 SVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDK 733 (1392)
Q Consensus 654 s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~e 733 (1392)
++++++++|+++.+|.... .......++.+++++.|+.+.. ..++...+.++.+.+++.+|.++|+++++|++++
T Consensus 255 ~~~~l~~~G~iv~~g~~~~--~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~~ 329 (351)
T 1yb5_A 255 DLSLLSHGGRVIVVGSRGT--IEINPRDTMAKESSIIGVTLFS---STKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEK 329 (351)
T ss_dssp HHHHEEEEEEEEECCCCSC--EEECTHHHHTTTCEEEECCGGG---CCHHHHHHHHHHHHHHHHHTCCCCCEEEEEEGGG
T ss_pred HHHhccCCCEEEEEecCCC--CccCHHHHHhCCcEEEEEEeec---CCHHHHHHHHHHHHHHHHCCCccCccceEEcHHH
Confidence 9999999999999995421 1111123467899999985432 2344456666777788889999999999999999
Q ss_pred HHHHHHH-HHcCCccceEEEEe
Q psy1119 734 VEEAFRY-MAAGKHIGKVIIKI 754 (1392)
Q Consensus 734 v~eA~~~-l~~g~~~GKvVI~~ 754 (1392)
+++||+. +++++..||+||++
T Consensus 330 ~~~A~~~~~~~~~~~gKvvi~~ 351 (351)
T 1yb5_A 330 VAEAHENIIHGSGATGKMILLL 351 (351)
T ss_dssp HHHHHHHHHHSSCCSSEEEEEC
T ss_pred HHHHHHHHHHhCCCCeEEEEeC
Confidence 9999998 66677899999864
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-39 Score=379.28 Aligned_cols=307 Identities=20% Similarity=0.280 Sum_probs=260.5
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
+....+|.+ +++.+.|.|. ++++||+|||.|+|||+.|++++.|..+.. ....|.++|||++|+|
T Consensus 11 ~~~~~~~~~--l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-----~~~~P~v~G~E~~G~V 75 (343)
T 3gaz_A 11 AVVEEANGP--FVLRKLARPQ--------PAPGQVLVQIEASGTNPLDAKIRAGEAPHA-----QQPLPAILGMDLAGTV 75 (343)
T ss_dssp EEECSTTCC--EEEEEEECCC--------CCTTEEEEEEEEEECCHHHHHHHTTCCGGG-----CCCSSBCCCCEEEEEE
T ss_pred EEEecCCCc--eEEEeccCCC--------CCCCEEEEEEEEEEeCHhhHHHhCCCCCCC-----CCCCCcccCcceEEEE
Confidence 444556655 8888988876 689999999999999999999999875321 1234789999999999
Q ss_pred e---------eCCCeEEEee-----cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEE
Q psy1119 505 R---------DSGKRVMGLT-----SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESIL 570 (1392)
Q Consensus 505 ~---------~vGdrV~gl~-----~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVL 570 (1392)
+ ++||||+++. ..|+|+||+++++..++++|+++|+++||++|++++|||+++...+++++|++||
T Consensus 76 ~~vG~~v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~Vl 155 (343)
T 3gaz_A 76 VAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVL 155 (343)
T ss_dssp EEECTTCCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEE
T ss_pred EEECCCCCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEE
Confidence 7 4799999886 3589999999999999999999999999999999999999998899999999999
Q ss_pred EEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhH
Q psy1119 571 IHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEK 650 (1392)
Q Consensus 571 I~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~ 650 (1392)
|+||+|++|++++|+|+..|++|+++ .+++|++++++ +++++ +| ++.++.+.+++.|+++|+|+|||+++++.
T Consensus 156 V~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~----lGa~~-i~-~~~~~~~~~~~~~~~~g~D~vid~~g~~~ 228 (343)
T 3gaz_A 156 IQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRD----LGATP-ID-ASREPEDYAAEHTAGQGFDLVYDTLGGPV 228 (343)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHH----HTSEE-EE-TTSCHHHHHHHHHTTSCEEEEEESSCTHH
T ss_pred EecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHH----cCCCE-ec-cCCCHHHHHHHHhcCCCceEEEECCCcHH
Confidence 99999999999999999999999999 78999999876 56777 77 77889999999999999999999999999
Q ss_pred HHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechh--hhhhCHHHHHHHHHHHHHHHHcCCCCCcce-e
Q psy1119 651 LQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDN--FFFAEQEWKMSLQKALQKAIDAGAVQPLVR-T 727 (1392)
Q Consensus 651 l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~--~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~-~ 727 (1392)
+..++++|+++|+++.+|.... .....++.+++++.++.... +....+......++.+.+++++|+++|.++ +
T Consensus 229 ~~~~~~~l~~~G~iv~~g~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~ 304 (343)
T 3gaz_A 229 LDASFSAVKRFGHVVSCLGWGT----HKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPRLDPR 304 (343)
T ss_dssp HHHHHHHEEEEEEEEESCCCSC----CCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCCCBCSC
T ss_pred HHHHHHHHhcCCeEEEEcccCc----cccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCcccCccCc
Confidence 9999999999999999986541 11224456899999976532 222334455567778888999999999988 7
Q ss_pred eeccccHHHHHHHHHcCCc----cceEEEEecCC
Q psy1119 728 IFPEDKVEEAFRYMAAGKH----IGKVIIKIRDE 757 (1392)
Q Consensus 728 vf~l~ev~eA~~~l~~g~~----~GKvVI~~~~~ 757 (1392)
+|+++++++||+.+.++++ .||+|+++..+
T Consensus 305 ~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~~ 338 (343)
T 3gaz_A 305 TFSIAEIGSAYDAVLGRNDVPRQRGKIAITVEGH 338 (343)
T ss_dssp CEETTCHHHHHHHHHTCTTCCCCSSBCEEECC--
T ss_pred EecHHHHHHHHHHHHcCCCcccccceEEEEeccc
Confidence 9999999999999999875 67999998754
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=374.51 Aligned_cols=307 Identities=20% Similarity=0.218 Sum_probs=259.0
Q ss_pred eeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
....+|.++.+++.+.|.|. ++++||+|||.|+|||+.|++.+.|.++.. ..|.++|||++|+|+
T Consensus 6 ~~~~~g~~~~l~~~~~~~p~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-------~~p~v~G~E~~G~V~ 70 (327)
T 1qor_A 6 EFHKHGGPEVLQAVEFTPAD--------PAENEIQVENKAIGINFIDTYIRSGLYPPP-------SLPSGLGTEAAGIVS 70 (327)
T ss_dssp EBSSCCSGGGCEEEECCCCC--------CCTTEEEEEEEEEECCHHHHHHHHTSSCCS-------SSSBCCCSCEEEEEE
T ss_pred EEcCCCChhheEEeccCCCC--------CCCCEEEEEEEEEecCHHHHHHhCCCCCCC-------CCCCCCCceeEEEEE
Confidence 44567777789999998875 689999999999999999999999976421 237899999999997
Q ss_pred ---------eCCCeEEEee--cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcC
Q psy1119 506 ---------DSGKRVMGLT--SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAG 574 (1392)
Q Consensus 506 ---------~vGdrV~gl~--~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga 574 (1392)
++|||| ++. ..|+|+||+.+|+..++++|+++|+++||+++++++|||+++...+++++|++|||+||
T Consensus 71 ~vG~~v~~~~~GdrV-~~~g~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga 149 (327)
T 1qor_A 71 KVGSGVKHIKAGDRV-VYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAA 149 (327)
T ss_dssp EECTTCCSCCTTCEE-EESCCSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred EECCCCCCCCCCCEE-EECCCCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC
Confidence 478999 443 34899999999999999999999999999999999999999987899999999999999
Q ss_pred CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHH
Q psy1119 575 SGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQAS 654 (1392)
Q Consensus 575 ~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s 654 (1392)
+|++|++++|+|+..|++|+++++++++++.+++ +++++++|.++.++.+.+.+.+.++|+|+|||+.+++.++.+
T Consensus 150 ~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~ 225 (327)
T 1qor_A 150 AGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----AGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERS 225 (327)
T ss_dssp TBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHH
T ss_pred CCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCCEEEECCCccHHHHHHHHhCCCCceEEEECCchHHHHHH
Confidence 9999999999999999999999999999999876 567889999999999999999988899999999998899999
Q ss_pred HhcccCCeEEEEEcccccccCccccc-cccCC-CcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcce--eeec
Q psy1119 655 VRCLAQGGRFLEIGKFDLANNNMLGM-EVFMR-ETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVR--TIFP 730 (1392)
Q Consensus 655 ~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k-~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~--~vf~ 730 (1392)
+++++++|+++.+|...... ..+.. .++.+ ++++.+.....+. ..+......++.+.+++++|+++|.++ ++|+
T Consensus 226 ~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~ 303 (327)
T 1qor_A 226 LDCLQRRGLMVSFGNSSGAV-TGVNLGILNQKGSLYVTRPSLQGYI-TTREELTEASNELFSLIASGVIKVDVAEQQKYP 303 (327)
T ss_dssp HHTEEEEEEEEECCCTTCCC-CCBCTHHHHHTTSCEEECCCHHHHC-CSHHHHHHHHHHHHHHHHTTSSCCCCCGGGEEE
T ss_pred HHHhcCCCEEEEEecCCCCC-CccCHHHHhhccceEEEccchhhhc-CCHHHHHHHHHHHHHHHHCCCcccccccCcEEc
Confidence 99999999999999653221 11221 23445 7777765433322 123333455667778899999999988 9999
Q ss_pred cccHHHHHHHHHcCCccceEEEEe
Q psy1119 731 EDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 731 l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
++++++||+.+.+++..||+||++
T Consensus 304 l~~~~~A~~~~~~~~~~gKvvl~~ 327 (327)
T 1qor_A 304 LKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_dssp GGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred HHHHHHHHHHHHhCCCCceEEEeC
Confidence 999999999999999999999864
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-40 Score=383.92 Aligned_cols=305 Identities=13% Similarity=0.142 Sum_probs=255.4
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
+....+|.++.|++.+.|.|. ++++||+|||.|+|||++|++.+.|.++.. ...|.++|||++|+|
T Consensus 4 ~~~~~~g~~~~l~~~~~~~p~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~------~~~p~v~G~E~~G~V 69 (324)
T 3nx4_A 4 LILEQQDGKTLASVQHLEESQ--------LPAGDVTVDVHWSSLNYKDALAITGKGKII------RHFPMIPGIDFAGTV 69 (324)
T ss_dssp EEEEESSSSEEEEEEECCGGG--------SCCCSEEEEEEEEEECHHHHHHHHTCTTCC------CSSSBCCCSEEEEEE
T ss_pred EEEecCCCCceeeEeecCCCC--------CCCCEEEEEEEEEeCCHHHHhhhcCCCCCC------CCCCccccceeEEEE
Confidence 345567888889999999886 789999999999999999999999976532 124789999999999
Q ss_pred e-------eCCCeEEEee------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHH--HhcCCCCCC-E
Q psy1119 505 R-------DSGKRVMGLT------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMF--ICGQMQKGE-S 568 (1392)
Q Consensus 505 ~-------~vGdrV~gl~------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~--~~a~l~~Ge-t 568 (1392)
+ ++||||++.. ..|+|+||+.+|++.++++|+++|+++||+++++++|||+++. ...++++++ +
T Consensus 70 ~~~Gv~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~ 149 (324)
T 3nx4_A 70 HASEDPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGE 149 (324)
T ss_dssp EEESSTTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCC
T ss_pred EEeCCCCCCCCCEEEEcccccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCe
Confidence 7 4799999753 4699999999999999999999999999999999999999986 345677733 4
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCch
Q psy1119 569 ILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE 648 (1392)
Q Consensus 569 VLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~ 648 (1392)
|||+||+|++|++++|+|+++|++|++++++++|++++++ +|+++++|+++.++ +++.++ .|+|+|||++++
T Consensus 150 VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~---~~~~~~-~~~d~v~d~~g~ 221 (324)
T 3nx4_A 150 VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS----LGANRILSRDEFAE---SRPLEK-QLWAGAIDTVGD 221 (324)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH----HTCSEEEEGGGSSC---CCSSCC-CCEEEEEESSCH
T ss_pred EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCCEEEecCCHHH---HHhhcC-CCccEEEECCCc
Confidence 9999999999999999999999999999999999999987 68999999887654 444454 589999999999
Q ss_pred hHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceee
Q psy1119 649 EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTI 728 (1392)
Q Consensus 649 ~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~v 728 (1392)
+.++.++++++++|+++.+|.............++.+++++.|+..... .++.....++.+.+++++|+++|+ +++
T Consensus 222 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~l~~~g~l~~~-~~~ 297 (324)
T 3nx4_A 222 KVLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMT---PPARRAEAWARLVKDLPESFYAQA-ATE 297 (324)
T ss_dssp HHHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTC---CHHHHHHHHHHHHHHSCHHHHHHH-EEE
T ss_pred HHHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEecccc---ChHHHHHHHHHHHHHHHcCCCCCC-cee
Confidence 9999999999999999999976432222222345678999999864332 234445566677788888889888 999
Q ss_pred eccccHHHHHHHHHcCCccceEEEEec
Q psy1119 729 FPEDKVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 729 f~l~ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
|+++++++||+.+.++++.||+||+++
T Consensus 298 ~~l~~~~~A~~~~~~~~~~gkvvv~~~ 324 (324)
T 3nx4_A 298 ITLADAPKFADAIINNQVQGRTLVKIK 324 (324)
T ss_dssp EEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred EeHHHHHHHHHHHHhCCCCceEEEecC
Confidence 999999999999999999999999863
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=384.12 Aligned_cols=303 Identities=19% Similarity=0.195 Sum_probs=256.2
Q ss_pred CCCCCceEEeC---------CCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeE
Q psy1119 431 GDMSSLTWEQG---------PVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYS 501 (1392)
Q Consensus 431 G~l~~l~~~~~---------~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~s 501 (1392)
|.++.+++.+. |.|. ++++||+|||+|+|||+.|++.+.|.++.. ...|.++|||++
T Consensus 23 ~~~~~l~~~~~~~~~~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~------~~~p~v~G~E~~ 88 (349)
T 3pi7_A 23 KTPSGSALEAMEPYLEQGRIAVPA--------PGPSQVLIKVNLASINPSDVAFIKGQYGQP------RVKGRPAGFEGV 88 (349)
T ss_dssp SSCCCSCCCCSTTTEEEEEEECCC--------CCTTEEEEEEEEEECCHHHHHHHTTCSSSC------BCTTSBCCSEEE
T ss_pred CCcccceEEEeecccccccCCCCC--------CCCCeEEEEEEEecCCHHHHHHhcccCCCC------CCCCCCccceEE
Confidence 46677888877 8775 799999999999999999999999987532 124789999999
Q ss_pred EEEee----------CCCeEEEee---cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCC-C
Q psy1119 502 GRLRD----------SGKRVMGLT---SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKG-E 567 (1392)
Q Consensus 502 GvV~~----------vGdrV~gl~---~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~G-e 567 (1392)
|+|++ +||||++.. ..|+|+||+.+|+..++++|+++|+++||++++.++|||+++ ..++ ++| +
T Consensus 89 G~V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~ 166 (349)
T 3pi7_A 89 GTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMF-DIVK-QEGEK 166 (349)
T ss_dssp EEEEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHH-HHHH-HHCCS
T ss_pred EEEEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHH-HHHh-hCCCC
Confidence 99973 588998875 469999999999999999999999999999999999999655 5566 677 7
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCc
Q psy1119 568 SILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLA 647 (1392)
Q Consensus 568 tVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~ 647 (1392)
+|||+||+|++|++++|+|++.|++|++++++++|++++++ +++++++|+++.++.+.+++.|+++|+|+|||+++
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g 242 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD----IGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVT 242 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH----HTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCC
Confidence 99999999999999999999999999999999999999986 67899999999999999999999889999999999
Q ss_pred hhHHHHHHhcccCCeEEEEEcccccccCcccc-ccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcce
Q psy1119 648 EEKLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVR 726 (1392)
Q Consensus 648 ~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~ 726 (1392)
++.+..++++++++|+++.+|........... ..++.+++++.|+.+..+....+......++.+.+++++|+++++++
T Consensus 243 ~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~ 322 (349)
T 3pi7_A 243 GPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVT 322 (349)
T ss_dssp HHHHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC-CC
T ss_pred ChhHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcccccc
Confidence 98889999999999999999965433222222 34567999999998777666555555666777778899999999999
Q ss_pred eeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 727 TIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 727 ~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
++|+++++++||+.+ +++..||+||++
T Consensus 323 ~~~~l~~~~~A~~~~-~~~~~gKvvl~p 349 (349)
T 3pi7_A 323 AVVPLAEAIAWVPAE-LTKPNGKVFIRP 349 (349)
T ss_dssp EEEEHHHHHHHHHHH-HTSSSSCEEEEC
T ss_pred eEEcHHHHHHHHHHH-hCCCCceEEEeC
Confidence 999999999999954 456779999874
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=376.55 Aligned_cols=301 Identities=22% Similarity=0.327 Sum_probs=256.6
Q ss_pred eeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
....+|.++.+++.+.|.|. ++++||+|||.|+|||+.|++++.|.++.. ...|.++|||++|+|+
T Consensus 5 ~~~~~g~~~~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~------~~~p~v~G~E~~G~V~ 70 (343)
T 2eih_A 5 VMRARGGPEVLEVADLPVPE--------PGPKEVRVRLKAAALNHLDVWVRKGVASPK------LPLPHVLGADGSGVVD 70 (343)
T ss_dssp EECSSSSGGGEEEEECCCCC--------CCTTEEEEEEEEEECCHHHHHHHHTSSSTT------CCSSEECCSEEEEEEE
T ss_pred EEecCCCCceEEEEecCCCC--------CCCCEEEEEEEEEEeCHHHHHHhcCCCCCC------CCCCcccccceEEEEE
Confidence 34556766678999998875 689999999999999999999999976431 1247899999999997
Q ss_pred ---------eCCCeEE-------E--------------------eecCCcccceEEecccceEEcCCCCCHhhHhhhhHH
Q psy1119 506 ---------DSGKRVM-------G--------------------LTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCV 549 (1392)
Q Consensus 506 ---------~vGdrV~-------g--------------------l~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~ 549 (1392)
++||||+ + +...|+|+||+.+|++.++++|+++|+++||+++++
T Consensus 71 ~vG~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~ 150 (343)
T 2eih_A 71 AVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLT 150 (343)
T ss_dssp EECSSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHH
T ss_pred EECCCCCCCCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhh
Confidence 4689998 4 334589999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHH
Q psy1119 550 YATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQL 629 (1392)
Q Consensus 550 ~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~ 629 (1392)
++|||+++...+++++|++|||+||+|++|++++|+|+..|++|+++++++++++++++ +++++++|.++.++.+.
T Consensus 151 ~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~ga~~~~d~~~~~~~~~ 226 (343)
T 2eih_A 151 FLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA----LGADETVNYTHPDWPKE 226 (343)
T ss_dssp HHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCSEEEETTSTTHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCCCEEEcCCcccHHHH
Confidence 99999999777899999999999999999999999999999999999999999999876 56788999988889999
Q ss_pred HHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhhhhhCHHHHHHH
Q psy1119 630 VMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFFAEQEWKMSL 708 (1392)
Q Consensus 630 i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~~~~~~~~~~ 708 (1392)
+++.++++|+|+|||+.+++.++.++++++++|+++.+|...... ..+++ .++.+++++.|+.... ...
T Consensus 227 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~---------~~~ 296 (343)
T 2eih_A 227 VRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYE-GTLPFAHVFYRQLSILGSTMAS---------KSR 296 (343)
T ss_dssp HHHHTTTTCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSCC-CCCCTTHHHHTTCEEEECCSCC---------GGG
T ss_pred HHHHhCCCCceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCc-CccCHHHHHhCCcEEEEecCcc---------HHH
Confidence 999998889999999999888999999999999999999754321 11222 3457899999875321 122
Q ss_pred HHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 709 QKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 709 ~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+..+.+++.+|+++|+++++|+++++++||+.+.+++..||+|+++
T Consensus 297 ~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 342 (343)
T 2eih_A 297 LFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV 342 (343)
T ss_dssp HHHHHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred HHHHHHHHHcCCCCCceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence 3455677888999999999999999999999999999899999875
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-38 Score=374.73 Aligned_cols=307 Identities=19% Similarity=0.217 Sum_probs=258.4
Q ss_pred EeeccC---CCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeE
Q psy1119 425 INALVR---GDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYS 501 (1392)
Q Consensus 425 l~~~~~---G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~s 501 (1392)
+....+ +.+..+++.+.|.|. ++++||+|||.|+|||+.|++.+.|.++.. ..|.++|||++
T Consensus 26 ~~~~~~~~~~~~~~l~~~~~p~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-------~~p~v~G~E~~ 90 (363)
T 4dvj_A 26 VGYNKPAPITDDASLLDIELPKPA--------PAGHDILVEVKAVSVNPVDYKVRRSTPPDG-------TDWKVIGYDAA 90 (363)
T ss_dssp EEBSSCCCTTSTTSSEEEEEECCC--------CCTTEEEEEEEEEECCHHHHHHHHHCCC---------CCSBCCCCCEE
T ss_pred EEEeccCCCCCCceEEEeecCCCC--------CCCCEEEEEEEEEEeCHHHHHHHcCCCCCC-------CCCCcccceeE
Confidence 444455 667889999998876 689999999999999999999999987532 24789999999
Q ss_pred EEEe---------eCCCeEEEee---cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCC-----
Q psy1119 502 GRLR---------DSGKRVMGLT---SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQ----- 564 (1392)
Q Consensus 502 GvV~---------~vGdrV~gl~---~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~----- 564 (1392)
|+|+ ++||||+++. ..|+|+||+.+|+..++++|+++|+++||++|++++|||+++...++++
T Consensus 91 G~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~ 170 (363)
T 4dvj_A 91 GIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPG 170 (363)
T ss_dssp EEEEEECTTCCSCCTTCEEEECCCTTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTT
T ss_pred EEEEEeCCCCCCCCCCCEEEEccCCCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCC
Confidence 9997 4789998763 3689999999999999999999999999999999999999999899998
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEE
Q psy1119 565 KGESILIHAGSGGVGQAAINLARY-MDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVL 643 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~-~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVl 643 (1392)
+|++|||+||+|++|++++|+|++ .|++|++++++++|++++++ +|+++++|+++ ++.+.+++. .++|+|+||
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad~vi~~~~-~~~~~v~~~-~~~g~Dvvi 244 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAHHVIDHSK-PLAAEVAAL-GLGAPAFVF 244 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCSEEECTTS-CHHHHHHTT-CSCCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCCEEEeCCC-CHHHHHHHh-cCCCceEEE
Confidence 999999999999999999999998 59999999999999999986 78999999875 688888877 667999999
Q ss_pred ecCchh-HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhh--hh-hCHHHHHHHHHHHHHHHHcC
Q psy1119 644 NSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNF--FF-AEQEWKMSLQKALQKAIDAG 719 (1392)
Q Consensus 644 ds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~--~~-~~~~~~~~~~~~~~~~l~~g 719 (1392)
|++++. .++.++++|+++|+++.+|... ......++.+++++.+...... +. .......+.++.+.+++++|
T Consensus 245 d~~g~~~~~~~~~~~l~~~G~iv~~g~~~----~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 320 (363)
T 4dvj_A 245 STTHTDKHAAEIADLIAPQGRFCLIDDPS----AFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEG 320 (363)
T ss_dssp ECSCHHHHHHHHHHHSCTTCEEEECSCCS----SCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHT
T ss_pred ECCCchhhHHHHHHHhcCCCEEEEECCCC----ccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCC
Confidence 999875 7899999999999999997531 1112245578899988654321 11 11222345667778899999
Q ss_pred CCCCcceeee---ccccHHHHHHHHHcCCccceEEEEecC
Q psy1119 720 AVQPLVRTIF---PEDKVEEAFRYMAAGKHIGKVIIKIRD 756 (1392)
Q Consensus 720 ~l~pl~~~vf---~l~ev~eA~~~l~~g~~~GKvVI~~~~ 756 (1392)
+++|.+.++| +++++++||+.+.+++..||+||++..
T Consensus 321 ~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~~ 360 (363)
T 4dvj_A 321 RLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGFG 360 (363)
T ss_dssp SSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECSC
T ss_pred CeeccccceecCCCHHHHHHHHHHHHhCCCceEEEEeCcc
Confidence 9999888776 899999999999999999999998853
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=373.26 Aligned_cols=299 Identities=20% Similarity=0.280 Sum_probs=248.5
Q ss_pred eEeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEE
Q psy1119 424 YINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGR 503 (1392)
Q Consensus 424 ~l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGv 503 (1392)
.+....+|.++.|++.+.|.|. ++++||+|||.|+|||+.|++++.|..... .......|.++|||++|+
T Consensus 9 a~~~~~~g~~~~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~~~~~~p~v~G~E~~G~ 78 (321)
T 3tqh_A 9 AIQFDQFGPPKVLKLVDTPTPE--------YRKNQMLIKVHAASLNPIDYKTRNGSGFVA--KKLKNNLPSGLGYDFSGE 78 (321)
T ss_dssp EEEESSSCSGGGEEEEEEECCC--------CCTTCEEEEEEEEECCHHHHHHHTTCSHHH--HHHTTSCSBCCCCEEEEE
T ss_pred EEEEccCCCcceeEEEecCCCC--------CCCCEEEEEEEEEEcCHHHHHHhcCCcccc--ccccCCCCCcccceeEEE
Confidence 3556678888889999998875 789999999999999999999998832100 001123478999999999
Q ss_pred Ee---------eCCCeEEEee----cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEE
Q psy1119 504 LR---------DSGKRVMGLT----SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESIL 570 (1392)
Q Consensus 504 V~---------~vGdrV~gl~----~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVL 570 (1392)
|+ ++||||+++. ..|+|+||+.++++.++++|+++++++||++|++++|||+++ ..+++++|++||
T Consensus 79 V~~vG~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vl 157 (321)
T 3tqh_A 79 VIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVL 157 (321)
T ss_dssp EEEECTTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEE
T ss_pred EEEeCCCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEE
Confidence 97 4789999875 358999999999999999999999999999999999999999 889999999999
Q ss_pred EEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCcc-HHHHHHHHcCCCcceEEEecCchh
Q psy1119 571 IHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTS-FEQLVMKRTKGRGVDLVLNSLAEE 649 (1392)
Q Consensus 571 I~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~-~~~~i~~~T~g~GvDvVlds~~~~ 649 (1392)
|+||+|++|++++|+|+.+|++|++++ ++++++++++ +|+++++|+++.+ +.+.+ +|+|+|||+++++
T Consensus 158 V~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~------~g~D~v~d~~g~~ 226 (321)
T 3tqh_A 158 IHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKA----LGAEQCINYHEEDFLLAIS------TPVDAVIDLVGGD 226 (321)
T ss_dssp ESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHH----HTCSEEEETTTSCHHHHCC------SCEEEEEESSCHH
T ss_pred EEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHH----cCCCEEEeCCCcchhhhhc------cCCCEEEECCCcH
Confidence 999999999999999999999999987 5667888876 6889999999887 65543 5899999999998
Q ss_pred HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeee
Q psy1119 650 KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIF 729 (1392)
Q Consensus 650 ~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf 729 (1392)
....++++++++|+++.+|...... .......+++++.++... ... ..++.+.+++++|++++.++++|
T Consensus 227 ~~~~~~~~l~~~G~iv~~g~~~~~~---~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~l~~~g~l~~~i~~~~ 295 (321)
T 3tqh_A 227 VGIQSIDCLKETGCIVSVPTITAGR---VIEVAKQKHRRAFGLLKQ----FNI----EELHYLGKLVSEDKLRIEISRIF 295 (321)
T ss_dssp HHHHHGGGEEEEEEEEECCSTTHHH---HHHHHHHTTCEEECCCCC----CCH----HHHHHHHHHHHTTSSCCCEEEEE
T ss_pred HHHHHHHhccCCCEEEEeCCCCchh---hhhhhhhcceEEEEEecC----CCH----HHHHHHHHHHHCCCcccccccEE
Confidence 8899999999999999998643211 111234678888774321 112 23455667899999999999999
Q ss_pred ccccHHHHHHHHHcCCccceEEEEec
Q psy1119 730 PEDKVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 730 ~l~ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
+++++++||+.+.+++..||+||+++
T Consensus 296 ~l~~~~~A~~~~~~~~~~gKvvl~~~ 321 (321)
T 3tqh_A 296 QLSEAVTAHELLETGHVRGKLVFKVR 321 (321)
T ss_dssp CGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred cHHHHHHHHHHHHcCCCCceEEEEeC
Confidence 99999999999999999999999863
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=378.41 Aligned_cols=311 Identities=17% Similarity=0.157 Sum_probs=252.6
Q ss_pred eEeeccCCCC-CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEE
Q psy1119 424 YINALVRGDM-SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSG 502 (1392)
Q Consensus 424 ~l~~~~~G~l-~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sG 502 (1392)
.+....+|.+ +.+++.+.|.|. ++++||+|||.|+|||+.|++.+.|.++.. ...|.++|||++|
T Consensus 29 a~~~~~~g~~~~~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~------~~~P~v~G~E~~G 94 (357)
T 1zsy_A 29 ALVYGHHGDPAKVVELKNLELAA--------VRGSDVRVKMLAAPINPSDINMIQGNYGLL------PELPAVGGNEGVA 94 (357)
T ss_dssp EEEESSSSCHHHHEEEEEECCCC--------CCTTEEEEEEEEEECCHHHHHHHHTCSSCC------CCSSEECCSCCEE
T ss_pred EEEEecCCCccceEEEeeccCCC--------CCCCEEEEEEEECCCCHHHhhHhcCCCCCC------CCCCccccceEEE
Confidence 3455667765 337888888775 689999999999999999999999976531 1237899999999
Q ss_pred EEe---------eCCCeEEEee-cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEE
Q psy1119 503 RLR---------DSGKRVMGLT-SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIH 572 (1392)
Q Consensus 503 vV~---------~vGdrV~gl~-~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ 572 (1392)
+|+ ++||||++.. ..|+|+||+++++..++++|+++|+++||+++++++|||+++...+++++|++|||+
T Consensus 95 ~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~ 174 (357)
T 1zsy_A 95 QVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQN 174 (357)
T ss_dssp EEEEECTTCCSCCTTCEEEESSSCSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEES
T ss_pred EEEEeCCCCCCCCCCCEEEEcCCCCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEe
Confidence 997 4789998875 358999999999999999999999999999999999999999888999999999999
Q ss_pred cCCchHHHHHHHHHHHcCCEEEEEecChh----hHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCC-cceEEEecCc
Q psy1119 573 AGSGGVGQAAINLARYMDAEIFTTVGTPE----KREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGR-GVDLVLNSLA 647 (1392)
Q Consensus 573 ga~GgVG~aaIqlA~~~Ga~V~~tv~s~e----k~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~-GvDvVlds~~ 647 (1392)
||+|++|++++|+|+.+||++++++++++ +++++++ +|+++++|+++.+ .+.+.+.+++. |+|+|||+++
T Consensus 175 Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~----lGa~~vi~~~~~~-~~~~~~~~~~~~~~Dvvid~~g 249 (357)
T 1zsy_A 175 ASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKS----LGAEHVITEEELR-RPEMKNFFKDMPQPRLALNCVG 249 (357)
T ss_dssp STTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHH----TTCSEEEEHHHHH-SGGGGGTTSSSCCCSEEEESSC
T ss_pred CCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHh----cCCcEEEecCcch-HHHHHHHHhCCCCceEEEECCC
Confidence 99999999999999999999999887643 4567765 7899999865321 23455666654 6999999999
Q ss_pred hhHHHHHHhcccCCeEEEEEcccccccCcccc-ccccCCCcEEEEEechhhhhh-CHHHHHHHHHHHHHHHHcCCCCCcc
Q psy1119 648 EEKLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVMLDNFFFA-EQEWKMSLQKALQKAIDAGAVQPLV 725 (1392)
Q Consensus 648 ~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~l~pl~ 725 (1392)
++....++++++++|+++.+|...... ..++ ..++.+++++.|+.+..+... .+......++.+.+++.+|++++.+
T Consensus 250 ~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~ 328 (357)
T 1zsy_A 250 GKSSTELLRQLARGGTMVTYGGMAKQP-VVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPA 328 (357)
T ss_dssp HHHHHHHHTTSCTTCEEEECCCCTTCC-BCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred cHHHHHHHHhhCCCCEEEEEecCCCCC-CCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCcc
Confidence 887788999999999999998543211 1122 234568999999876544322 3444455667778899999999988
Q ss_pred eeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 726 RTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 726 ~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
.++|+++++++||+.+.+++..||+||++
T Consensus 329 ~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 357 (357)
T 1zsy_A 329 CSQVPLQDYQSALEASMKPFISSKQILTM 357 (357)
T ss_dssp EEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred ceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence 89999999999999999999899999874
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=380.74 Aligned_cols=318 Identities=14% Similarity=0.136 Sum_probs=257.3
Q ss_pred eeccCCCC-CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChh-hhhh-hccccc-cccceeeE
Q psy1119 426 NALVRGDM-SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPE-VIES-RRLYQH-CVIGFEYS 501 (1392)
Q Consensus 426 ~~~~~G~l-~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~-~~~~-~~~~~p-~~lG~E~s 501 (1392)
....+|.+ +.+++.+.|.|... ++++||+|||.|+|||+.|++.+.|.++.. .+|. .....| .++|||++
T Consensus 8 ~~~~~g~~~~~l~~~~~~~P~p~------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~~ 81 (364)
T 1gu7_A 8 LYTQHGEPKDVLFTQSFEIDDDN------LAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL 81 (364)
T ss_dssp EESSCSCHHHHCEEEEEEECTTS------CCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred EeccCCCchheeEEeeccCCCCC------CCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCceeE
Confidence 34556654 44788888877511 249999999999999999999999976531 1110 000112 78999999
Q ss_pred EEEe---------eCCCeEEEee-cCCcccceEEecccceEEcCC-----------CCCHhhHhhhhHHHHHHHHHHHHh
Q psy1119 502 GRLR---------DSGKRVMGLT-SGRSLANCCETDVEMAWEIPD-----------QWTLEDAATVPCVYATAVYAMFIC 560 (1392)
Q Consensus 502 GvV~---------~vGdrV~gl~-~~g~~a~~v~~~~~~~~~iPd-----------~ls~e~AA~lp~~~~TA~~aL~~~ 560 (1392)
|+|+ ++||||++.. ..|+|+||+++++..++++|+ ++|+++||+++++++|||+++...
T Consensus 82 G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~ 161 (364)
T 1gu7_A 82 FEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHY 161 (364)
T ss_dssp EEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSS
T ss_pred EEEEEeCCCCCcCCCCCEEEecCCCCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHh
Confidence 9997 4789998864 358999999999999999998 899999999999999999999877
Q ss_pred cCCCCC-CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh----HHHHHHHCCCCCcCceeeCCC---ccHHHHHHH
Q psy1119 561 GQMQKG-ESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEK----REFIRKTFPFIKEENIGNSRD---TSFEQLVMK 632 (1392)
Q Consensus 561 a~l~~G-etVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek----~~~l~~~~p~l~~~~i~~s~~---~~~~~~i~~ 632 (1392)
+++++| ++|||+||+|+||++++|+|+++|++|++++++.++ ++++++ +|+++++|+++ .++.+.+++
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~~~~i~~ 237 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKE----LGATQVITEDQNNSREFGPTIKE 237 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHH----HTCSEEEEHHHHHCGGGHHHHHH
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHh----cCCeEEEecCccchHHHHHHHHH
Confidence 899999 999999999999999999999999999999977665 577765 68899999875 678889999
Q ss_pred Hc--CCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCcccc-ccccCCCcEEEEEechhhhhhCHHHHHHHH
Q psy1119 633 RT--KGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVMLDNFFFAEQEWKMSLQ 709 (1392)
Q Consensus 633 ~T--~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~ 709 (1392)
.| +++|+|+|||+++++....++++++++|+++.+|...... ..++ ..++.+++++.|+....+....+......+
T Consensus 238 ~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 316 (364)
T 1gu7_A 238 WIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQP-VTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTL 316 (364)
T ss_dssp HHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCC-EEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHH
T ss_pred HhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCCC-cccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHH
Confidence 98 6779999999999887778999999999999999653211 1122 234568999999877665555555455667
Q ss_pred HHHHHHHHcCCCCCcceeeeccc---cHHHHHHHHHcCCccceEEEEe
Q psy1119 710 KALQKAIDAGAVQPLVRTIFPED---KVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 710 ~~~~~~l~~g~l~pl~~~vf~l~---ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+.+.+++++|++++.+..+|+++ ++.+||+.+.++++.||+||++
T Consensus 317 ~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 364 (364)
T 1gu7_A 317 NQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY 364 (364)
T ss_dssp HHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred HHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence 77888999999999777888775 9999999999999999999874
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=369.60 Aligned_cols=293 Identities=23% Similarity=0.348 Sum_probs=242.6
Q ss_pred eeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
....+|.+..++ +.|.|. ++++||+|||.|+|||+.|++++.|.++.. ...|.++|||++|+|+
T Consensus 5 ~~~~~g~~~~l~--~~~~p~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~------~~~p~i~G~e~~G~V~ 68 (302)
T 1iz0_A 5 VLKRLGGPLELV--DLPEPE--------AEEGEVVLRVEAVGLNFADHLMRLGAYLTR------LHPPFIPGMEVVGVVE 68 (302)
T ss_dssp EECSTTSCEEEE--ECCCCC--------CCTTEEEEEEEEEEECHHHHHHHHTCSSSC------CCSSBCCCCEEEEEET
T ss_pred EEcCCCCchheE--ECCCCC--------CCCCEEEEEEEEEecCHHHHHHhCCCCCCC------CCCCCcccceEEEEEE
Confidence 344566665444 777764 689999999999999999999999976531 1247899999999998
Q ss_pred eCCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHH
Q psy1119 506 DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINL 585 (1392)
Q Consensus 506 ~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIql 585 (1392)
||||++....|+|+||+.++++.++++|+++|+++||+++++++|||+++...+ +++|++|||+||+|++|++++|+
T Consensus 69 --GdrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~ 145 (302)
T 1iz0_A 69 --GRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQV 145 (302)
T ss_dssp --TEEEEEECSSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHH
T ss_pred --CcEEEEecCCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHH
Confidence 999999887799999999999999999999999999999999999999998788 99999999999999999999999
Q ss_pred HHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCC-ccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEE
Q psy1119 586 ARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRD-TSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRF 664 (1392)
Q Consensus 586 A~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~-~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~ 664 (1392)
|+..|++|++++++++|++++++ +++++++|+++ .++.+.+ +|+|+||| ++++.++.++++++++|++
T Consensus 146 a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~~~~~~~~~~~~~~~~------~~~d~vid-~g~~~~~~~~~~l~~~G~~ 214 (302)
T 1iz0_A 146 ARAMGLRVLAAASRPEKLALPLA----LGAEEAATYAEVPERAKAW------GGLDLVLE-VRGKEVEESLGLLAHGGRL 214 (302)
T ss_dssp HHHTTCEEEEEESSGGGSHHHHH----TTCSEEEEGGGHHHHHHHT------TSEEEEEE-CSCTTHHHHHTTEEEEEEE
T ss_pred HHHCCCEEEEEeCCHHHHHHHHh----cCCCEEEECCcchhHHHHh------cCceEEEE-CCHHHHHHHHHhhccCCEE
Confidence 99999999999999999999976 67899999877 6665554 58999999 8888899999999999999
Q ss_pred EEEcccccccCccccc-cccCCCcEEEEEechhhhhhCHHHHHHHHHHHHH---HHHcCCCCCcceeeeccccHHHHHHH
Q psy1119 665 LEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQK---AIDAGAVQPLVRTIFPEDKVEEAFRY 740 (1392)
Q Consensus 665 v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~---~l~~g~l~pl~~~vf~l~ev~eA~~~ 740 (1392)
+.+|....... .+++ .++.+++++.|+.+..+ .... ..++.+.+ ++.+|+++|+++++|+++++++||+.
T Consensus 215 v~~g~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~-~~~~----~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~ 288 (302)
T 1iz0_A 215 VYIGAAEGEVA-PIPPLRLMRRNLAVLGFWLTPL-LREG----ALVEEALGFLLPRLGRELRPVVGPVFPFAEAEAAFRA 288 (302)
T ss_dssp EEC-------C-CCCTTHHHHTTCEEEECCHHHH-TTCH----HHHHHHHHHHGGGBTTTBCCCEEEEEEGGGHHHHHHH
T ss_pred EEEeCCCCCCC-CcCHHHHHhCCCeEEEEeccch-hhhH----HHHHHHHhhhHHHHcCCcccccceEEcHHHHHHHHHH
Confidence 99997543211 1222 35678999999875443 1122 23344455 78899999999999999999999999
Q ss_pred HHcCCccceEEEEe
Q psy1119 741 MAAGKHIGKVIIKI 754 (1392)
Q Consensus 741 l~~g~~~GKvVI~~ 754 (1392)
+.+++..||+|+++
T Consensus 289 ~~~~~~~gKvvv~~ 302 (302)
T 1iz0_A 289 LLDRGHTGKVVVRL 302 (302)
T ss_dssp TTCTTCCBEEEEEC
T ss_pred HHcCCCCceEEEeC
Confidence 99998999999863
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=371.40 Aligned_cols=286 Identities=19% Similarity=0.162 Sum_probs=234.7
Q ss_pred CCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe------
Q psy1119 432 DMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR------ 505 (1392)
Q Consensus 432 ~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~------ 505 (1392)
.++.+++.+.|.|. ++++||+|||.|+|||+.|++.+.|.++.. ..|.++|||++|+|+
T Consensus 13 ~~~~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-------~~p~i~G~e~~G~V~~vG~~v 77 (315)
T 3goh_A 13 KTHSVTLNSVDIPA--------LAADDILVQNQAIGINPVDWKFIKANPINW-------SNGHVPGVDGAGVIVKVGAKV 77 (315)
T ss_dssp TTTEEEEEEEECCC--------CCTTEEEEEEEEEEECHHHHHHHHHCTTCC-------CTTCCCCSEEEEEEEEECTTS
T ss_pred CCCeeEEEecCCCC--------CCCCEEEEEEEEEecCHHHHHHHcCCCCcC-------CCCCEeeeeeEEEEEEeCCCC
Confidence 56778999988875 799999999999999999999999876532 247899999999997
Q ss_pred ---eCCCeEEEeec---CCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHH
Q psy1119 506 ---DSGKRVMGLTS---GRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVG 579 (1392)
Q Consensus 506 ---~vGdrV~gl~~---~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG 579 (1392)
++||||++... .|+|+||+.+|++.++++|+++|+++||+++++++|||+++ ..+++++|++|||+|| |++|
T Consensus 78 ~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG 155 (315)
T 3goh_A 78 DSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGF-GAVN 155 (315)
T ss_dssp CGGGTTCEEEEECCTTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECC-SHHH
T ss_pred CCCCCCCEEEEeCCCCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECC-CHHH
Confidence 47899998753 69999999999999999999999999999999999999999 8999999999999999 9999
Q ss_pred HHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhccc
Q psy1119 580 QAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLA 659 (1392)
Q Consensus 580 ~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La 659 (1392)
++++|+|+++|++|++++ +++|++++++ +|++++++ + .+.+ ++|+|+|||+++++.+..++++|+
T Consensus 156 ~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~----lGa~~v~~--d---~~~v-----~~g~Dvv~d~~g~~~~~~~~~~l~ 220 (315)
T 3goh_A 156 NLLTQMLNNAGYVVDLVS-ASLSQALAAK----RGVRHLYR--E---PSQV-----TQKYFAIFDAVNSQNAAALVPSLK 220 (315)
T ss_dssp HHHHHHHHHHTCEEEEEC-SSCCHHHHHH----HTEEEEES--S---GGGC-----CSCEEEEECC-------TTGGGEE
T ss_pred HHHHHHHHHcCCEEEEEE-ChhhHHHHHH----cCCCEEEc--C---HHHh-----CCCccEEEECCCchhHHHHHHHhc
Confidence 999999999999999999 8999999987 68899884 2 2233 679999999999888889999999
Q ss_pred CCeEEEEEcccccccCccccccccCCCcEEEEEechhhhh-hCHH---HHHHHHHHHHHHHHcCCCCCcceeeeccccHH
Q psy1119 660 QGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFF-AEQE---WKMSLQKALQKAIDAGAVQPLVRTIFPEDKVE 735 (1392)
Q Consensus 660 ~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~-~~~~---~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~ 735 (1392)
++|+++.+|.... ......+.+++++..+.+..... ..+. .....++.+.+++++|+++|+++++|++++++
T Consensus 221 ~~G~~v~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~ 296 (315)
T 3goh_A 221 ANGHIICIQDRIP----APIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRFEQMI 296 (315)
T ss_dssp EEEEEEEECCC--------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGHH
T ss_pred CCCEEEEEeCCCC----ccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcccccceEecHHHHH
Confidence 9999999975421 12234566788888887765443 3333 23445677788999999999999999999999
Q ss_pred HHHHHHHcCCccceEEEEec
Q psy1119 736 EAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 736 eA~~~l~~g~~~GKvVI~~~ 755 (1392)
+||+.+. ++.||+||+++
T Consensus 297 ~A~~~~~--~~~gKvvi~~~ 314 (315)
T 3goh_A 297 EALDHSE--QTKLKTVLTLN 314 (315)
T ss_dssp HHHHHHH--HHCCCEEEESC
T ss_pred HHHHHHH--hcCCcEEEEec
Confidence 9999998 78899999885
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-38 Score=374.67 Aligned_cols=301 Identities=17% Similarity=0.233 Sum_probs=246.1
Q ss_pred CCceEE-eCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-------
Q psy1119 434 SSLTWE-QGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR------- 505 (1392)
Q Consensus 434 ~~l~~~-~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~------- 505 (1392)
..+++. +.|.|. ++++||+|||.|+|||+.|++++.|.. . .|.++|||++|+|+
T Consensus 21 ~~l~~~~~~~~p~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~-~---------~p~v~G~e~~G~V~~vG~~v~ 82 (371)
T 3gqv_A 21 DEVTVWNAAPCPM--------LPRDQVYVRVEAVAINPSDTSMRGQFA-T---------PWAFLGTDYAGTVVAVGSDVT 82 (371)
T ss_dssp SCEEEEEEECCCC--------CCTTSEEEEEEEEECCGGGGC-----C-C---------TTSCCCSEEEEEEEEECTTCC
T ss_pred CceEEeccCCCCC--------CCCCEEEEEEEEEEcCHHHHHHhhcCC-C---------CCccCccccEEEEEEeCCCCC
Confidence 468888 888876 689999999999999999999887632 1 27899999999997
Q ss_pred --eCCCeEEEee--------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHh-cCC-----------
Q psy1119 506 --DSGKRVMGLT--------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFIC-GQM----------- 563 (1392)
Q Consensus 506 --~vGdrV~gl~--------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~-a~l----------- 563 (1392)
++||||++.. ..|+|+||+++++..++++|+++++++||++|++++|||+++... .++
T Consensus 83 ~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~ 162 (371)
T 3gqv_A 83 HIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTH 162 (371)
T ss_dssp SCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCC
T ss_pred CCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCcccccccc
Confidence 4789999886 258999999999999999999999999999999999999999887 553
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEE
Q psy1119 564 QKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVL 643 (1392)
Q Consensus 564 ~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVl 643 (1392)
++|++|||+||+|++|++++|+|++.|++|++++ +++|++++++ +|+++++|+++.++.+.+++.|+|+ +|+||
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~----lGa~~vi~~~~~~~~~~v~~~t~g~-~d~v~ 236 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKS----RGAEEVFDYRAPNLAQTIRTYTKNN-LRYAL 236 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH----TTCSEEEETTSTTHHHHHHHHTTTC-CCEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHH----cCCcEEEECCCchHHHHHHHHccCC-ccEEE
Confidence 8999999999999999999999999999999997 7899998876 7899999999999999999999874 99999
Q ss_pred ecCch-hHHHHHHhcc-cCCeEEEEEccccc--------ccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHH
Q psy1119 644 NSLAE-EKLQASVRCL-AQGGRFLEIGKFDL--------ANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQ 713 (1392)
Q Consensus 644 ds~~~-~~l~~s~~~L-a~~Gr~v~iG~~~~--------~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~ 713 (1392)
|++++ ..++.++++| +++||++.+|.... .....+.+.++.+++++.|+..........+....+...+.
T Consensus 237 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 316 (371)
T 3gqv_A 237 DCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAG 316 (371)
T ss_dssp ESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHH
T ss_pred ECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHH
Confidence 99987 5789999999 59999999995432 11112234567788888776432222222234455666777
Q ss_pred HHHHcCCCCCcc--eeeeccccHHHHHHHHHcCCccce-EEEEecCCC
Q psy1119 714 KAIDAGAVQPLV--RTIFPEDKVEEAFRYMAAGKHIGK-VIIKIRDEE 758 (1392)
Q Consensus 714 ~~l~~g~l~pl~--~~vf~l~ev~eA~~~l~~g~~~GK-vVI~~~~~~ 758 (1392)
+++++|++++.+ ++.|+++++++||+.+.+++..|| +|+.+.++.
T Consensus 317 ~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~~~ 364 (371)
T 3gqv_A 317 QLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEGPL 364 (371)
T ss_dssp HHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECCC-
T ss_pred HHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCCcc
Confidence 899999999864 445999999999999999999995 677776543
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=369.75 Aligned_cols=296 Identities=16% Similarity=0.151 Sum_probs=252.8
Q ss_pred eeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
....+|++ +++.+.|.|. ++++||+|||+|+|||+.|++.+.|.++.. ....|.++|||++|+|+
T Consensus 5 ~~~~~g~~--l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-----~~~~p~i~G~e~~G~V~ 69 (345)
T 3jv7_A 5 QYTEIGSE--PVVVDIPTPT--------PGPGEILLKVTAAGLCHSDIFVMDMPAAQY-----AYGLPLTLGHEGVGTVA 69 (345)
T ss_dssp EECSTTSC--CEEEECCCCC--------CCTTCEEEEEEEEECCHHHHHHHHSCTTTC-----CSCSSEECCSEEEEEEE
T ss_pred EEcCCCCc--eEEEEecCCC--------CCCCeEEEEEEEEeeCHHHHHHHcCCCCcc-----CCCCCcccCcccEEEEE
Confidence 34456654 8889998876 799999999999999999999999976421 12347899999999997
Q ss_pred ---------eCCCeEEEee--------------------------------cCCcccceEEec-ccceEEcCCCCCHhhH
Q psy1119 506 ---------DSGKRVMGLT--------------------------------SGRSLANCCETD-VEMAWEIPDQWTLEDA 543 (1392)
Q Consensus 506 ---------~vGdrV~gl~--------------------------------~~g~~a~~v~~~-~~~~~~iPd~ls~e~A 543 (1392)
++||||++.. ..|+|+||+++| +..++++|+ +++++|
T Consensus 70 ~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~a 148 (345)
T 3jv7_A 70 ELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAA 148 (345)
T ss_dssp EECTTCCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHH
T ss_pred EECCCCCCCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHh
Confidence 4789998742 368999999999 999999999 999999
Q ss_pred hhhhHHHHHHHHHHHH-hcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHCCCCCcCceeeC
Q psy1119 544 ATVPCVYATAVYAMFI-CGQMQKGESILIHAGSGGVGQAAINLARYM-DAEIFTTVGTPEKREFIRKTFPFIKEENIGNS 621 (1392)
Q Consensus 544 A~lp~~~~TA~~aL~~-~a~l~~GetVLI~ga~GgVG~aaIqlA~~~-Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s 621 (1392)
|+++++++|||+++.. .+++++|++|||+|+ |++|++++|+|+++ |++|++++.+++|++++++ +|+++++++
T Consensus 149 a~l~~~~~ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~~~i~~ 223 (345)
T 3jv7_A 149 APLTDAGLTPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGADAAVKS 223 (345)
T ss_dssp GGGGTTTHHHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCSEEEEC
T ss_pred hhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCCEEEcC
Confidence 9999999999999977 458999999999976 99999999999999 7899999999999999986 789999998
Q ss_pred CCccHHHHHHHHcCCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhh
Q psy1119 622 RDTSFEQLVMKRTKGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFA 700 (1392)
Q Consensus 622 ~~~~~~~~i~~~T~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~ 700 (1392)
++ ++.+.+++.|+|+|+|+|||+++++ .++.++++|+++|+++.+|..... ...+++.++.+++++.+.....
T Consensus 224 ~~-~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~~~~~---- 297 (345)
T 3jv7_A 224 GA-GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGA-HAKVGFFMIPFGASVVTPYWGT---- 297 (345)
T ss_dssp ST-THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTC-CEEESTTTSCTTCEEECCCSCC----
T ss_pred CC-cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCC-CCCcCHHHHhCCCEEEEEecCC----
Confidence 76 8899999999999999999999886 899999999999999999975432 2233456778999999876543
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 701 EQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 701 ~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
. ..+..+.+++++|++++ ++++|+++++++||+.+.+++..||+||.+
T Consensus 298 -~----~~~~~~~~l~~~g~l~~-~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p 345 (345)
T 3jv7_A 298 -R----SELMEVVALARAGRLDI-HTETFTLDEGPAAYRRLREGSIRGRGVVVP 345 (345)
T ss_dssp -H----HHHHHHHHHHHTTCCCC-CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred -H----HHHHHHHHHHHcCCCce-EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence 1 23445667899999998 458999999999999999999999999864
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=366.14 Aligned_cols=291 Identities=18% Similarity=0.247 Sum_probs=246.3
Q ss_pred CCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-------
Q psy1119 433 MSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR------- 505 (1392)
Q Consensus 433 l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~------- 505 (1392)
...+++.+.|.|. |+||||+|||.|+|||++|++++.|.++.. .|.++|||++|+|+
T Consensus 11 ~~~~~l~e~~~P~--------~~p~eVLVkv~a~gic~~D~~~~~G~~~~~--------~p~i~GhE~aG~V~~vG~~V~ 74 (348)
T 4eez_A 11 DGYADLVEKELRA--------IKPNEALLDMEYCGVCHTDLHVAAGDFGNK--------AGTVLGHEGIGIVKEIGADVS 74 (348)
T ss_dssp CSSEEEEECCCCC--------CCTTEEEEEEEEEECCHHHHHHHTTTTCCC--------TTCBCCSEEEEEEEEECTTCC
T ss_pred CCcEEEEEeECCC--------CCCCEEEEEEEEEEECHHHHHHhcCCCCCC--------CCcccceeEEEEEEEECceee
Confidence 3568889999886 799999999999999999999999987643 37899999999997
Q ss_pred --eCCCeEEEe----------------------------ecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHH
Q psy1119 506 --DSGKRVMGL----------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVY 555 (1392)
Q Consensus 506 --~vGdrV~gl----------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~ 555 (1392)
++||||+.. ...|+|+||+.+++..++++|+++++++||+++++++|||+
T Consensus 75 ~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~ 154 (348)
T 4eez_A 75 SLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYK 154 (348)
T ss_dssp SCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHH
T ss_pred ecccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEe
Confidence 468898653 12489999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHc
Q psy1119 556 AMFICGQMQKGESILIHAGSGGVGQAAINLARYM-DAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRT 634 (1392)
Q Consensus 556 aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~-Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T 634 (1392)
++ ..+++++|++|||+|| |++|++++|+|+.+ |++|++|+++++|++++++ +++++++|+++.++.+.+++.|
T Consensus 155 ~l-~~~~~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~----~Ga~~~i~~~~~~~~~~v~~~t 228 (348)
T 4eez_A 155 AI-KVSGVKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK----IGADVTINSGDVNPVDEIKKIT 228 (348)
T ss_dssp HH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH----TTCSEEEEC-CCCHHHHHHHHT
T ss_pred ee-cccCCCCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh----cCCeEEEeCCCCCHHHHhhhhc
Confidence 98 5678999999999965 99999999999865 7899999999999998886 7899999999999999999999
Q ss_pred CCCcceEEEecCc-hhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHH
Q psy1119 635 KGRGVDLVLNSLA-EEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQ 713 (1392)
Q Consensus 635 ~g~GvDvVlds~~-~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~ 713 (1392)
+++|+|+++++.+ ++.+..++++++++|+++.+|....... .....++.+++++.|+.... ... +..+.
T Consensus 229 ~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~gs~~~~-----~~~----~~~~~ 298 (348)
T 4eez_A 229 GGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMT-LSVPTVVFDGVEVAGSLVGT-----RLD----LAEAF 298 (348)
T ss_dssp TSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEE-ECHHHHHHSCCEEEECCSCC-----HHH----HHHHH
T ss_pred CCCCceEEEEeccCcchhheeheeecCCceEEEEeccCCCCc-cCHHHHHhCCeEEEEEecCC-----HHH----HHHHH
Confidence 9999999999875 4678999999999999999986543221 11224567899999875433 111 23445
Q ss_pred HHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEecC
Q psy1119 714 KAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRD 756 (1392)
Q Consensus 714 ~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~ 756 (1392)
+++++|+++|+. ++|+++++++||+.|++|+..||+||+|+.
T Consensus 299 ~l~~~g~i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~sk 340 (348)
T 4eez_A 299 QFGAEGKVKPIV-ATRKLEEINDIIDEMKAGKIEGRMVIDFTK 340 (348)
T ss_dssp HHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred HHHHcCCCEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEEccc
Confidence 788999999865 789999999999999999999999999964
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=372.26 Aligned_cols=301 Identities=16% Similarity=0.232 Sum_probs=250.7
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
+....+|.+ +++.+.|.|. ++++||+|||+|+|||+.|++++.|..+.. ..|.++|||++|+|
T Consensus 12 ~v~~~~~~~--l~~~~~~~p~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-------~~P~v~GhE~~G~V 74 (378)
T 3uko_A 12 AVAYEPNKP--LVIEDVQVAP--------PQAGEVRIKILYTALCHTDAYTWSGKDPEG-------LFPCILGHEAAGIV 74 (378)
T ss_dssp EEBCSTTSC--CEEEEEEECC--------CCTTEEEEEEEEEEECHHHHHHHTTCCTTC-------CSSBCCCCEEEEEE
T ss_pred EEEecCCCc--cEEEEecCCC--------CCCCeEEEEEEEeecCHHHHHHhcCCCCCC-------CCCccCCccceEEE
Confidence 444555543 8888888875 689999999999999999999999986532 24789999999999
Q ss_pred e---------eCCCeEEEeec-------------------------------------------------CCcccceEEe
Q psy1119 505 R---------DSGKRVMGLTS-------------------------------------------------GRSLANCCET 526 (1392)
Q Consensus 505 ~---------~vGdrV~gl~~-------------------------------------------------~g~~a~~v~~ 526 (1392)
+ ++||||++... .|+|+||+.+
T Consensus 75 ~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v 154 (378)
T 3uko_A 75 ESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVV 154 (378)
T ss_dssp EEECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEE
T ss_pred EEeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEe
Confidence 7 47899986432 1589999999
Q ss_pred cccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHH
Q psy1119 527 DVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREF 605 (1392)
Q Consensus 527 ~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~ 605 (1392)
++..++++|+++|+++||+++++++|||+++.+.+++++|++|||+|+ |+||++++|+|+++|+ +|++++.+++|+++
T Consensus 155 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~ 233 (378)
T 3uko_A 155 HDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYET 233 (378)
T ss_dssp EGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHH
T ss_pred chhheEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence 999999999999999999999999999999989999999999999976 9999999999999999 79999999999998
Q ss_pred HHHHCCCCCcCceeeCC--CccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCC-eEEEEEcccccccCcccccc
Q psy1119 606 IRKTFPFIKEENIGNSR--DTSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQG-GRFLEIGKFDLANNNMLGME 681 (1392)
Q Consensus 606 l~~~~p~l~~~~i~~s~--~~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~-Gr~v~iG~~~~~~~~~l~~~ 681 (1392)
+++ +|+++++|++ +.++.+.+++.|++ |+|+|||++++ +.++.++++++++ |+++.+|.........+...
T Consensus 234 a~~----lGa~~vi~~~~~~~~~~~~i~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~ 308 (378)
T 3uko_A 234 AKK----FGVNEFVNPKDHDKPIQEVIVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 308 (378)
T ss_dssp HHT----TTCCEEECGGGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTH
T ss_pred HHH----cCCcEEEccccCchhHHHHHHHhcCC-CCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHH
Confidence 875 7899999987 67899999999998 99999999987 6789999999996 99999997542222222222
Q ss_pred ccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEEec
Q psy1119 682 VFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 682 ~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
.+.+++++.|+.+..+.. ......+.+++.+|++++ +++++|+++++++||+.+.+++.. |+||+++
T Consensus 309 ~~~~~~~i~g~~~~~~~~------~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~~ 377 (378)
T 3uko_A 309 QLVTGRVWKGTAFGGFKS------RTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDTS 377 (378)
T ss_dssp HHHTTCEEEECSGGGCCH------HHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEETT
T ss_pred HHhcCcEEEEEEecCCCc------hHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEecC
Confidence 233488898876543211 122345567888998874 688999999999999999998876 9999875
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=368.04 Aligned_cols=294 Identities=19% Similarity=0.226 Sum_probs=248.1
Q ss_pred eccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-
Q psy1119 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR- 505 (1392)
Q Consensus 427 ~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~- 505 (1392)
...+|.+ +++.+.|.|. ++++||+|||+|+|||+.|++.+.|.++.. ...|.++|||++|+|+
T Consensus 8 ~~~~g~~--l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~------~~~P~v~G~E~~G~V~~ 71 (340)
T 3s2e_A 8 VRAFGAP--LTIDEVPVPQ--------PGPGQVQVKIEASGVCHTDLHAADGDWPVK------PTLPFIPGHEGVGYVSA 71 (340)
T ss_dssp BCSTTSC--CEEEEEECCC--------CCTTCEEEEEEEEEECHHHHHHHHTCSSSC------CCSSBCCCSEEEEEEEE
T ss_pred EecCCCC--CEEEEccCCC--------CCCCeEEEEEEEeccCHHHHHHHcCCCCCC------CCCCcccCCcceEEEEE
Confidence 3445543 8888888876 689999999999999999999999987532 1247899999999997
Q ss_pred --------eCCCeEEE----------------------------eecCCcccceEEecccceEEcCCCCCHhhHhhhhHH
Q psy1119 506 --------DSGKRVMG----------------------------LTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCV 549 (1392)
Q Consensus 506 --------~vGdrV~g----------------------------l~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~ 549 (1392)
++||||.. +...|+|+||+.+|++.++++|+++|+++||+++++
T Consensus 72 vG~~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~ 151 (340)
T 3s2e_A 72 VGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCA 151 (340)
T ss_dssp ECSSCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTH
T ss_pred ECCCCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccch
Confidence 47899942 123589999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHH
Q psy1119 550 YATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQL 629 (1392)
Q Consensus 550 ~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~ 629 (1392)
+.|||+++ ..+++++|++|||+|+ |++|++++|+|+++|++|++++++++|++++++ +++++++|+++.++.+.
T Consensus 152 ~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~ 225 (340)
T 3s2e_A 152 GVTVYKGL-KVTDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR----LGAEVAVNARDTDPAAW 225 (340)
T ss_dssp HHHHHHHH-HTTTCCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHH
T ss_pred hHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----cCCCEEEeCCCcCHHHH
Confidence 99999999 6789999999999975 999999999999999999999999999999986 78999999999999999
Q ss_pred HHHHcCCCcceEEEecCc-hhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHHHHH
Q psy1119 630 VMKRTKGRGVDLVLNSLA-EEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSL 708 (1392)
Q Consensus 630 i~~~T~g~GvDvVlds~~-~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~ 708 (1392)
+++ +.| |+|+|||+.+ ++.++.++++|+++|+++.+|..... .......++.+++++.|+.... . ..
T Consensus 226 ~~~-~~g-~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~~~~~-----~----~~ 293 (340)
T 3s2e_A 226 LQK-EIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGD-FGTPIFDVVLKGITIRGSIVGT-----R----SD 293 (340)
T ss_dssp HHH-HHS-SEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSE-EEEEHHHHHHTTCEEEECCSCC-----H----HH
T ss_pred HHH-hCC-CCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCC-CCCCHHHHHhCCeEEEEEecCC-----H----HH
Confidence 988 555 8999999886 57899999999999999999865421 1112234567899999976542 2 22
Q ss_pred HHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEec
Q psy1119 709 QKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 709 ~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
+..+.+++++|++++. .++|+++++++||+.+++++..||+||+++
T Consensus 294 ~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~ 339 (340)
T 3s2e_A 294 LQESLDFAAHGDVKAT-VSTAKLDDVNDVFGRLREGKVEGRVVLDFS 339 (340)
T ss_dssp HHHHHHHHHTTSCCCC-EEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred HHHHHHHHHhCCCCce-EEEEeHHHHHHHHHHHHcCCCceEEEEecC
Confidence 4455678899999986 467899999999999999999999999875
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=367.84 Aligned_cols=296 Identities=18% Similarity=0.222 Sum_probs=248.3
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
+....+|. .+++.+.|.|.. ++++||+|||.|+|||+.|++.+.|.++.. .....|.++|||++|+|
T Consensus 19 ~~~~~~g~--~l~~~~~p~P~~-------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~----~~~~~p~v~G~E~~G~V 85 (359)
T 1h2b_A 19 ARLHEYNK--PLRIEDVDYPRL-------EGRFDVIVRIAGAGVCHTDLHLVQGMWHEL----LQPKLPYTLGHENVGYI 85 (359)
T ss_dssp EEESSTTS--CCEEECCCCCCC-------BTTBCEEEEEEEEECCHHHHHHHHTTTHHH----HCCCSSEECCCCEEEEE
T ss_pred EEEecCCC--CcEEEEccCCCC-------CCCCEEEEEEEEEEecccchHHHhCCCccc----cCCCCCeecCcCceEEE
Confidence 34445553 478888887641 478999999999999999999999976411 01124789999999999
Q ss_pred e---------eCCCeEEEee---------------------------cCCcccceEEecccceEEcCCCCCHhhHh---h
Q psy1119 505 R---------DSGKRVMGLT---------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAA---T 545 (1392)
Q Consensus 505 ~---------~vGdrV~gl~---------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA---~ 545 (1392)
+ ++||||++.. ..|+|+||+++|+..++++|+++|+++|| +
T Consensus 86 ~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~ 165 (359)
T 1h2b_A 86 EEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAP 165 (359)
T ss_dssp EEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGG
T ss_pred EEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhccc
Confidence 7 4789998753 35899999999999999999999999999 8
Q ss_pred hhHHHHHHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHCCCCCcCceeeCCC
Q psy1119 546 VPCVYATAVYAMFIC-GQMQKGESILIHAGSGGVGQAAINLARYM-DAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRD 623 (1392)
Q Consensus 546 lp~~~~TA~~aL~~~-a~l~~GetVLI~ga~GgVG~aaIqlA~~~-Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~ 623 (1392)
++++++|||+++... +++++|++|||+|| |++|++++|+|+++ |++|++++++++|++++++ +|+++++|+++
T Consensus 166 l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~ 240 (359)
T 1h2b_A 166 LADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----LGADHVVDARR 240 (359)
T ss_dssp GGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----TTCSEEEETTS
T ss_pred hhhhHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH----hCCCEEEeccc
Confidence 999999999999766 89999999999988 99999999999999 9999999999999999986 78999999988
Q ss_pred ccHHHHHHHHcCCCcceEEEecCchh---HHHHHHhcccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhhhh
Q psy1119 624 TSFEQLVMKRTKGRGVDLVLNSLAEE---KLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFF 699 (1392)
Q Consensus 624 ~~~~~~i~~~T~g~GvDvVlds~~~~---~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~ 699 (1392)
. +.+.+++.|+++|+|+|||+++++ .+..++++ ++|+++.+|..... .++. .++.+++++.|+....
T Consensus 241 ~-~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~---~~~~~~~~~~~~~i~g~~~~~--- 311 (359)
T 1h2b_A 241 D-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL---RFPTIRVISSEVSFEGSLVGN--- 311 (359)
T ss_dssp C-HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC---CCCHHHHHHTTCEEEECCSCC---
T ss_pred h-HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC---CCCHHHHHhCCcEEEEecCCC---
Confidence 8 889999999988999999999876 78888888 99999999975322 2222 4567899999975432
Q ss_pred hCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 700 AEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 700 ~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
. ..+..+.+++.+|+++|.+ ++|+++++++||+.+.+++..||+||++
T Consensus 312 --~----~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 359 (359)
T 1h2b_A 312 --Y----VELHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP 359 (359)
T ss_dssp --H----HHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred --H----HHHHHHHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence 1 2234566788999999988 9999999999999999999899999864
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=359.86 Aligned_cols=296 Identities=15% Similarity=0.223 Sum_probs=252.6
Q ss_pred CCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhcccccccccee----eEEEEe--
Q psy1119 432 DMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFE----YSGRLR-- 505 (1392)
Q Consensus 432 ~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E----~sGvV~-- 505 (1392)
.++.|++.+.|.|. ++++||+|||+|+|||+.|.....|.... ..|.++||| ++|+|+
T Consensus 22 ~~~~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~d~~~~~~~~~~--------~~p~~~G~e~g~~~~G~V~~~ 85 (336)
T 4b7c_A 22 GRDTFSFVETPLGE--------PAEGQILVKNEYLSLDPAMRGWMNDARSY--------IPPVGIGEVMRALGVGKVLVS 85 (336)
T ss_dssp CTTSEEEEEEECCC--------CCTTCEEEEEEEEECCTHHHHHHSCSCCS--------SCCCCTTSBCCCEEEEEEEEE
T ss_pred CCCceEEEeccCCC--------CCCCEEEEEEEEEEeCHHHHhhhhccccc--------CCCCCCCcccCCceEEEEEec
Confidence 56889999999886 79999999999999999999888764321 125566666 899986
Q ss_pred -----eCCCeEEEeecCCcccceEEecccceEEcCCCCCHhhH--hhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Q psy1119 506 -----DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDA--ATVPCVYATAVYAMFICGQMQKGESILIHAGSGGV 578 (1392)
Q Consensus 506 -----~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~A--A~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgV 578 (1392)
++||||++. |+|+||+.+|++.++++|++++++++ |+++++++|||+++.+.+++++|++|||+||+|++
T Consensus 86 ~v~~~~vGdrV~~~---G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~i 162 (336)
T 4b7c_A 86 KHPGFQAGDYVNGA---LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAV 162 (336)
T ss_dssp CSTTCCTTCEEEEE---CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHH
T ss_pred CCCCCCCCCEEecc---CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHH
Confidence 489999974 78999999999999999999988776 88999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcc
Q psy1119 579 GQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCL 658 (1392)
Q Consensus 579 G~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~L 658 (1392)
|++++|+|+..|++|+++++++++++++.+ .+++++++|+++.++.+.+++.++ +|+|+|||+.+++.+..+++++
T Consensus 163 G~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vi~~~g~~~~~~~~~~l 238 (336)
T 4b7c_A 163 GSVAGQIARLKGCRVVGIAGGAEKCRFLVE---ELGFDGAIDYKNEDLAAGLKRECP-KGIDVFFDNVGGEILDTVLTRI 238 (336)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TTCCSEEEETTTSCHHHHHHHHCT-TCEEEEEESSCHHHHHHHHTTE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCCCEEEECCCHHHHHHHHHhcC-CCceEEEECCCcchHHHHHHHH
Confidence 999999999999999999999999999944 368899999999999999999994 6999999999999999999999
Q ss_pred cCCeEEEEEcccccccC-----cccc-ccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccc
Q psy1119 659 AQGGRFLEIGKFDLANN-----NMLG-MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPED 732 (1392)
Q Consensus 659 a~~Gr~v~iG~~~~~~~-----~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ 732 (1392)
+++|+++.+|....... .... ..++.+++++.|+....+... ....+..+.+++++|++++.+..+|+++
T Consensus 239 ~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~----~~~~~~~~~~l~~~g~l~~~~~~~~~l~ 314 (336)
T 4b7c_A 239 AFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQR----FPEGLKEMATWLAEGKLQSREDIVEGLE 314 (336)
T ss_dssp EEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGG----HHHHHHHHHHHHHTTSSCCCEEEEECGG
T ss_pred hhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhh----hHHHHHHHHHHHHCCCcccceeeecCHH
Confidence 99999999997642211 1111 245578999999876654322 2345566678899999999988889999
Q ss_pred cHHHHHHHHHcCCccceEEEEe
Q psy1119 733 KVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 733 ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
++++||+.+.+++..||+||++
T Consensus 315 ~~~~A~~~~~~~~~~gKvvi~~ 336 (336)
T 4b7c_A 315 TFPETLLKLFSGENFGKLVLKV 336 (336)
T ss_dssp GHHHHHHHHHTTCCCSEEEEEC
T ss_pred HHHHHHHHHHcCCCCceEEEeC
Confidence 9999999999999999999975
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-37 Score=364.22 Aligned_cols=290 Identities=18% Similarity=0.248 Sum_probs=243.4
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHH-HhcCCCChhhhhhhccccccccceeeEEEEe--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIM-LTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-------- 505 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~-~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-------- 505 (1392)
.+++.+.|.|. ++++||+|||+|+|||++|++ +..|.++.. .|.++|||++|+|+
T Consensus 11 ~~~~~e~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~--------~p~v~G~E~~G~V~~vG~~v~~ 74 (352)
T 3fpc_A 11 KVGWIEKEKPA--------PGPFDAIVRPLAVAPCTSDIHTVFEGAIGER--------HNMILGHEAVGEVVEVGSEVKD 74 (352)
T ss_dssp EEEEEECCCCC--------CCTTCEEEEEEEEECCHHHHHHHHSCTTCCC--------SSEECCCEEEEEEEEECTTCCS
T ss_pred CceEEeCCCCC--------CCCCeEEEEeCEEeEcccchHHHhCCCCCCC--------CCcccCCcceEEEEEECCCCCc
Confidence 36788888876 689999999999999999999 668876532 37899999999997
Q ss_pred -eCCCeEEEe------------------------------ecCCcccceEEeccc--ceEEcCCCCCHhhHhhhhHHHHH
Q psy1119 506 -DSGKRVMGL------------------------------TSGRSLANCCETDVE--MAWEIPDQWTLEDAATVPCVYAT 552 (1392)
Q Consensus 506 -~vGdrV~gl------------------------------~~~g~~a~~v~~~~~--~~~~iPd~ls~e~AA~lp~~~~T 552 (1392)
++||||+.. ...|+|+||+.+++. .++++|+++|+++||+++++++|
T Consensus 75 ~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~t 154 (352)
T 3fpc_A 75 FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTT 154 (352)
T ss_dssp CCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHH
T ss_pred CCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHH
Confidence 478999852 135899999999976 89999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHH
Q psy1119 553 AVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVM 631 (1392)
Q Consensus 553 A~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~ 631 (1392)
||+++ +.+++++|++|||+| +|++|++++|+|+++|+ +|++++++++|++++++ +|+++++|+++.++.+.++
T Consensus 155 a~~al-~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~v~ 228 (352)
T 3fpc_A 155 GFHGA-ELANIKLGDTVCVIG-IGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE----YGATDIINYKNGDIVEQIL 228 (352)
T ss_dssp HHHHH-HHTTCCTTCCEEEEC-CSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH----HTCCEEECGGGSCHHHHHH
T ss_pred HHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----hCCceEEcCCCcCHHHHHH
Confidence 99998 788999999999997 59999999999999999 79999999999999987 6889999999999999999
Q ss_pred HHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccc---cccCCCcEEEEEechhhhhhCHHHHHH
Q psy1119 632 KRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGM---EVFMRETSFHGVMLDNFFFAEQEWKMS 707 (1392)
Q Consensus 632 ~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~---~~~~k~~s~~g~~~~~~~~~~~~~~~~ 707 (1392)
+.|+|+|+|+|||++++ +.++.++++|+++|+++.+|.........+.. ....+++++.+..... .. .
T Consensus 229 ~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~----~~----~ 300 (352)
T 3fpc_A 229 KATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPG----GR----L 300 (352)
T ss_dssp HHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCC----HH----H
T ss_pred HHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccC----ch----h
Confidence 99999999999999987 68999999999999999999653221111111 1224678888864321 01 2
Q ss_pred HHHHHHHHHHcCCCCC--cceeeec-cccHHHHHHHHHcCCc-cceEEEEe
Q psy1119 708 LQKALQKAIDAGAVQP--LVRTIFP-EDKVEEAFRYMAAGKH-IGKVIIKI 754 (1392)
Q Consensus 708 ~~~~~~~~l~~g~l~p--l~~~vf~-l~ev~eA~~~l~~g~~-~GKvVI~~ 754 (1392)
.++.+.+++++|++++ +++++|+ ++++++||+.+.+++. .+|+||++
T Consensus 301 ~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~ 351 (352)
T 3fpc_A 301 RMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVIL 351 (352)
T ss_dssp HHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEEC
T ss_pred HHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 2455667899999987 4789999 9999999999998765 48999986
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-37 Score=367.17 Aligned_cols=297 Identities=16% Similarity=0.210 Sum_probs=249.4
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
+....+| +.+++.+.|.|. ++++||+|||.|+|||++|++++.|.++.. ..|.++|||++|+|
T Consensus 21 ~~~~~~g--~~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~-------~~P~v~GhE~~G~V 83 (380)
T 1vj0_A 21 MVLEKFN--QPLVYKEFEISD--------IPRGSILVEILSAGVCGSDVHMFRGEDPRV-------PLPIILGHEGAGRV 83 (380)
T ss_dssp EEBCSTT--SCCEEEEEEECC--------CCTTCEEEEEEEEEECHHHHHHHTTCCTTC-------CSSBCCCCEEEEEE
T ss_pred EEEecCC--CCeEEEEccCCC--------CCCCEEEEEEeEEeecccchHHhcCCCCCC-------CCCcccCcCcEEEE
Confidence 3445566 478898888875 689999999999999999999999976421 24789999999998
Q ss_pred ee--------------CCCeEEEe------------------------------------ecCCcccceEEe-cccceEE
Q psy1119 505 RD--------------SGKRVMGL------------------------------------TSGRSLANCCET-DVEMAWE 533 (1392)
Q Consensus 505 ~~--------------vGdrV~gl------------------------------------~~~g~~a~~v~~-~~~~~~~ 533 (1392)
++ +||||++. ...|+|+||+++ |+..+++
T Consensus 84 ~~vG~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~ 163 (380)
T 1vj0_A 84 VEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLK 163 (380)
T ss_dssp EEESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEE
T ss_pred EEeCCccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEE
Confidence 53 67899873 125899999999 9999999
Q ss_pred cCCCCCHh-hHhhhhHHHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHC
Q psy1119 534 IPDQWTLE-DAATVPCVYATAVYAMFICGQ-MQKGESILIHAGSGGVGQAAINLARYMD-AEIFTTVGTPEKREFIRKTF 610 (1392)
Q Consensus 534 iPd~ls~e-~AA~lp~~~~TA~~aL~~~a~-l~~GetVLI~ga~GgVG~aaIqlA~~~G-a~V~~tv~s~ek~~~l~~~~ 610 (1392)
+|+++|++ +||.++ +++|||+++ ..++ +++|++|||+| +|++|++++|+|+++| ++|++++++++|++++++
T Consensus 164 iP~~l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~-- 238 (380)
T 1vj0_A 164 VSEKDDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE-- 238 (380)
T ss_dssp ECTTSCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH--
T ss_pred CCCCCChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH--
Confidence 99999999 777777 999999999 6788 99999999998 7999999999999999 599999999999999986
Q ss_pred CCCCcCceeeCC---CccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccc-c-ccC
Q psy1119 611 PFIKEENIGNSR---DTSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGM-E-VFM 684 (1392)
Q Consensus 611 p~l~~~~i~~s~---~~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~-~~~ 684 (1392)
++++++++++ +.++.+.+++.|+|+|+|+|||++++ +.+..++++++++|+++.+|.........+++ . ++.
T Consensus 239 --lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~ 316 (380)
T 1vj0_A 239 --IGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVL 316 (380)
T ss_dssp --TTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTT
T ss_pred --cCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHh
Confidence 6889999998 77889999999998999999999986 68999999999999999999754110122222 3 678
Q ss_pred CCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHc--CCCCCcceeeeccccHHHHHHHHHcCCccceEEEEec
Q psy1119 685 RETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDA--GAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 685 k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~--g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
+++++.|+.... . ..++.+.+++++ |+++++++++|+++++++||+.+.+++.. |+||+++
T Consensus 317 ~~~~i~g~~~~~-----~----~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~ 379 (380)
T 1vj0_A 317 KNATFKGIWVSD-----T----SHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYPE 379 (380)
T ss_dssp TTCEEEECCCCC-----H----HHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEECC
T ss_pred CCeEEEEeecCC-----H----HHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence 999999976532 2 223455677788 88888899999999999999999999888 9999874
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=364.86 Aligned_cols=303 Identities=13% Similarity=0.173 Sum_probs=240.9
Q ss_pred eeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
....+|.+..+++.+.|.|. ++++||+|||.|+|||+.|++.+.|..+.. ...|.++|||++|+|+
T Consensus 8 ~~~~~g~~~~l~~~~~~~p~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~------~~~p~v~G~E~~G~V~ 73 (328)
T 1xa0_A 8 VVNKTETEFTAGVQTISMDD--------LPEGDVLVRVHYSSVNYKDGLASIPDGKIV------KTYPFVPGIDLAGVVV 73 (328)
T ss_dssp EEEEETTEEEEEEEEEEGGG--------SCSCSEEEEEEEEECCHHHHHHTSGGGSSC------CSSSBCCCSEEEEEEE
T ss_pred EEecCCCcceeEEEeccCCC--------CCCCeEEEEEEEEecCHHHHHhhcCCCCCC------CCCCcccCcceEEEEE
Confidence 34455655578888888775 689999999999999999999998864321 1247899999999997
Q ss_pred -------eCCCeEEEee------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHH--HhcCCCCCC-EE
Q psy1119 506 -------DSGKRVMGLT------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMF--ICGQMQKGE-SI 569 (1392)
Q Consensus 506 -------~vGdrV~gl~------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~--~~a~l~~Ge-tV 569 (1392)
++||||++.. ..|+|+||+.+|+..++++|+++|+++||++++++.|||+++. ..+++++|+ +|
T Consensus 74 ~~~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~V 153 (328)
T 1xa0_A 74 SSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPV 153 (328)
T ss_dssp ECCSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCE
T ss_pred ecCCCCCCCCCEEEEccccCCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceE
Confidence 4799998752 3589999999999999999999999999999999999999885 347899997 99
Q ss_pred EEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchh
Q psy1119 570 LIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEE 649 (1392)
Q Consensus 570 LI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~ 649 (1392)
||+||+|++|++++|+|+++|++|++++++++|++++++ +++++++|+++.+ .+.+++.+ +.|+|+|||+++++
T Consensus 154 lV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~-~~~~~~~~-~~~~d~vid~~g~~ 227 (328)
T 1xa0_A 154 LVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----LGAKEVLAREDVM-AERIRPLD-KQRWAAAVDPVGGR 227 (328)
T ss_dssp EESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----TTCSEEEECC----------CC-SCCEEEEEECSTTT
T ss_pred EEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----cCCcEEEecCCcH-HHHHHHhc-CCcccEEEECCcHH
Confidence 999999999999999999999999999999999999976 6889999987654 34444444 45899999999988
Q ss_pred HHHHHHhcccCCeEEEEEcccccccCcccc-ccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceee
Q psy1119 650 KLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTI 728 (1392)
Q Consensus 650 ~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~v 728 (1392)
.+..++++++++|+++.+|...... .... ..++.+++++.|+..... ......+..+.+.+++++| ++++ +++
T Consensus 228 ~~~~~~~~l~~~G~~v~~G~~~~~~-~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~g-l~~~-~~~ 301 (328)
T 1xa0_A 228 TLATVLSRMRYGGAVAVSGLTGGAE-VPTTVHPFILRGVSLLGIDSVYC---PMDLRLRIWERLAGDLKPD-LERI-AQE 301 (328)
T ss_dssp THHHHHHTEEEEEEEEECSCCSSSC-CCCCSHHHHHTTCEEEECCSSSC---CHHHHHHHHHHHHTTTCCC-HHHH-EEE
T ss_pred HHHHHHHhhccCCEEEEEeecCCCC-CCCchhhhhhcCceEEEEecccC---CHHHHHHHHHHHHHHHHcC-Ccee-eeE
Confidence 8999999999999999999653211 1122 234578999999743211 1222334455555666777 7774 689
Q ss_pred eccccHHHHHHHHHcCCccceEEEEe
Q psy1119 729 FPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 729 f~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
|+++++++||+.+.++++.||+||++
T Consensus 302 ~~l~~~~~A~~~~~~~~~~gKvvv~~ 327 (328)
T 1xa0_A 302 ISLAELPQALKRILRGELRGRTVVRL 327 (328)
T ss_dssp EEGGGHHHHHHHHHHTCCCSEEEEEC
T ss_pred eCHHHHHHHHHHHHcCCCCCeEEEEe
Confidence 99999999999999999999999976
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=359.15 Aligned_cols=296 Identities=20% Similarity=0.297 Sum_probs=246.9
Q ss_pred eeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcC-CCChhhhhhhccccccccceeeEEEE
Q psy1119 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTA-KLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G-~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
....+|. .+++.+.|.|. ++++||+|||.|+|||+.|++.+.| .++.. ....|.++|||++|+|
T Consensus 9 ~~~~~g~--~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-----~~~~p~v~G~E~~G~V 73 (348)
T 2d8a_A 9 MKTKPGY--GAELVEVDVPK--------PGPGEVLIKVLATSICGTDLHIYEWNEWAQS-----RIKPPQIMGHEVAGEV 73 (348)
T ss_dssp EECSSSS--SCEEEEEECCC--------CCTTEEEEEEEEEECCHHHHHHHHTCTTHHH-----HCCSSEECCCEEEEEE
T ss_pred EEECCCC--CEEEEECCCCC--------CCcCEEEEEEeEEEecHHHHHHHcCCCCCcc-----cCCCCCccCccceEEE
Confidence 3444553 68888888875 6899999999999999999999998 44311 1234789999999999
Q ss_pred e---------eCCCeEEEee---------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhhH
Q psy1119 505 R---------DSGKRVMGLT---------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPC 548 (1392)
Q Consensus 505 ~---------~vGdrV~gl~---------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~ 548 (1392)
+ ++||||++.. ..|+|+||+++|+..++++|+++|+++||+++
T Consensus 74 ~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~- 152 (348)
T 2d8a_A 74 VEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE- 152 (348)
T ss_dssp EEECTTCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-
T ss_pred EEECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-
Confidence 7 4689998752 35899999999999999999999999999986
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHH
Q psy1119 549 VYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFE 627 (1392)
Q Consensus 549 ~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~ 627 (1392)
+++|||+++ ..+++ +|++|||+|| |++|++++|+|+.+|+ +|++++++++|++++++ +++++++|+++.++.
T Consensus 153 ~~~ta~~~l-~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~ 225 (348)
T 2d8a_A 153 PLGNAVDTV-LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK----VGADYVINPFEEDVV 225 (348)
T ss_dssp HHHHHHHHH-TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH----HTCSEEECTTTSCHH
T ss_pred HHHHHHHHH-HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCCEEECCCCcCHH
Confidence 889999999 78889 9999999998 9999999999999999 99999999999999986 678999999999999
Q ss_pred HHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCcccc--ccccCCCcEEEEEechhhhhhCHHH
Q psy1119 628 QLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLG--MEVFMRETSFHGVMLDNFFFAEQEW 704 (1392)
Q Consensus 628 ~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~--~~~~~k~~s~~g~~~~~~~~~~~~~ 704 (1392)
+.+++.|+++|+|+|||+++. +.++.++++++++|+++.+|.... ...++ ..++.+++++.|+.... ..
T Consensus 226 ~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~--~~~~~~~~~~~~~~~~i~g~~~~~----~~-- 297 (348)
T 2d8a_A 226 KEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPG--KVTIDFNNLIIFKALTIYGITGRH----LW-- 297 (348)
T ss_dssp HHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS--CCCCCHHHHTTTTTCEEEECCCCC----SH--
T ss_pred HHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC--CcccCchHHHHhCCcEEEEecCCC----cH--
Confidence 999999999999999999986 778999999999999999997532 12222 24568899999975322 11
Q ss_pred HHHHHHHHHHHHHcCCC--CCcceeeec-cccHHHHHHHHHcCCccceEEEEec
Q psy1119 705 KMSLQKALQKAIDAGAV--QPLVRTIFP-EDKVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 705 ~~~~~~~~~~~l~~g~l--~pl~~~vf~-l~ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
..+..+.+++++|++ +|+++++|+ ++++++||+.+++ +..||+||+++
T Consensus 298 --~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~ 348 (348)
T 2d8a_A 298 --ETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK 348 (348)
T ss_dssp --HHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred --HHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence 223456677888984 667889999 9999999999977 67899999863
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=362.41 Aligned_cols=297 Identities=18% Similarity=0.219 Sum_probs=247.7
Q ss_pred eeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
....+|. .+++.+.|.|. ++++||+|||.|+|||+.|++++.|.++. ..|.++|||++|+|+
T Consensus 11 ~~~~~g~--~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--------~~P~v~GhE~~G~V~ 72 (371)
T 1f8f_A 11 VTPCKGA--DFELQALKIRQ--------PQGDEVLVKVVATGMCHTDLIVRDQKYPV--------PLPAVLGHEGSGIIE 72 (371)
T ss_dssp EBCSTTC--CCEEEEEEECC--------CCTTEEEEEEEEEECCHHHHHHHTTSSCC--------CSSBCCCCEEEEEEE
T ss_pred EEcCCCC--CeEEEEecCCC--------CCCCEEEEEEEEeecCchhHHHHcCCCCC--------CCCcccCcccceEEE
Confidence 3344553 37888888775 68999999999999999999999997642 237899999999997
Q ss_pred ---------eCCCeEEEee-------------------------------------------------cCCcccceEEec
Q psy1119 506 ---------DSGKRVMGLT-------------------------------------------------SGRSLANCCETD 527 (1392)
Q Consensus 506 ---------~vGdrV~gl~-------------------------------------------------~~g~~a~~v~~~ 527 (1392)
++||||++.. ..|+|+||+++|
T Consensus 73 ~vG~~v~~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~ 152 (371)
T 1f8f_A 73 AIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSR 152 (371)
T ss_dssp EECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEE
T ss_pred EeCCCCCCCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEec
Confidence 4789998620 148999999999
Q ss_pred ccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH
Q psy1119 528 VEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFI 606 (1392)
Q Consensus 528 ~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l 606 (1392)
+..++++|+++|+++||+++++++|||+++...+++++|++|||+| +|+||++++|+|+++|+ +|++++.+++|++++
T Consensus 153 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a 231 (371)
T 1f8f_A 153 ENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWG-AGAVGLSALLAAKVCGASIIIAVDIVESRLELA 231 (371)
T ss_dssp GGGEEEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEES-CSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH
T ss_pred hhheEECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence 9999999999999999999999999999998889999999999997 59999999999999999 699999999999999
Q ss_pred HHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCcccc-ccccC
Q psy1119 607 RKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVFM 684 (1392)
Q Consensus 607 ~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~ 684 (1392)
++ +++++++|+++.++.+.+++.|++ |+|+|||++++ +.++.++++|+++|+++.+|.........++ ..++.
T Consensus 232 ~~----lGa~~vi~~~~~~~~~~~~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~ 306 (371)
T 1f8f_A 232 KQ----LGATHVINSKTQDPVAAIKEITDG-GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLL 306 (371)
T ss_dssp HH----HTCSEEEETTTSCHHHHHHHHTTS-CEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHH
T ss_pred HH----cCCCEEecCCccCHHHHHHHhcCC-CCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHh
Confidence 76 678999999999999999999988 99999999986 6789999999999999999975422111222 23457
Q ss_pred CCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 685 RETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 685 k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+++++.|+..... .+ ...+..+.+++++|++++ ++++ |+++++++||+.+.+++. +|+||++
T Consensus 307 ~~~~i~g~~~~~~---~~---~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~ 370 (371)
T 1f8f_A 307 GGKTILGVVEGSG---SP---KKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKI 370 (371)
T ss_dssp TTCEEEECSGGGS---CH---HHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEEC
T ss_pred CCCEEEEeCCCCC---ch---HHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEee
Confidence 8999999764331 11 233455667889999886 4667 999999999999998876 7999876
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-38 Score=368.51 Aligned_cols=306 Identities=14% Similarity=0.205 Sum_probs=247.4
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
+....+|....+++.+.|.|. ++++||+|||.|+|||+.|++.+.|..+.. ...|.++|||++|+|
T Consensus 8 ~~~~~~g~~~~l~~~~~~~p~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~------~~~p~i~G~E~~G~V 73 (330)
T 1tt7_A 8 LQAEKNADDVSVHVKTISTED--------LPKDGVLIKVAYSGINYKDGLAGKAGGNIV------REYPLILGIDAAGTV 73 (330)
T ss_dssp EEECCGGGSCCCEEEEEESSS--------SCSSSEEEEECCEEECHHHHHHTSTTCTTC------SSCSEECCSEEEEEE
T ss_pred EEEecCCCCcceeEeecCCCC--------CCCCEEEEEEEEEecCHHHHhhhcCCCCCc------CCCCccccceEEEEE
Confidence 344556656678899888875 689999999999999999999999875421 124789999999999
Q ss_pred e-------eCCCeEEEee------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHH--HhcCCCCCC-E
Q psy1119 505 R-------DSGKRVMGLT------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMF--ICGQMQKGE-S 568 (1392)
Q Consensus 505 ~-------~vGdrV~gl~------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~--~~a~l~~Ge-t 568 (1392)
+ ++||||++.. ..|+|+||+.+|++.++++|+++|+++||++++++.|||+++. ..+++++|+ +
T Consensus 74 ~~~~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~ 153 (330)
T 1tt7_A 74 VSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGS 153 (330)
T ss_dssp EECSSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCC
T ss_pred EEcCCCCCCCCCEEEEcccccCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCce
Confidence 7 4799998752 4589999999999999999999999999999999999999886 347899997 9
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCch
Q psy1119 569 ILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE 648 (1392)
Q Consensus 569 VLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~ 648 (1392)
|||+||+|++|++++|+|+.+|++|++++++++|++++++ +++++++|+++.+ .+.+++.+ +.|+|+|||++++
T Consensus 154 VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa~~v~~~~~~~-~~~~~~~~-~~~~d~vid~~g~ 227 (330)
T 1tt7_A 154 VLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ----LGASEVISREDVY-DGTLKALS-KQQWQGAVDPVGG 227 (330)
T ss_dssp EEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH----HTCSEEEEHHHHC-SSCCCSSC-CCCEEEEEESCCT
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCcEEEECCCch-HHHHHHhh-cCCccEEEECCcH
Confidence 9999999999999999999999999999999999999986 5788998865432 12233333 4589999999999
Q ss_pred hHHHHHHhcccCCeEEEEEcccccccCcccc-ccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCccee
Q psy1119 649 EKLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRT 727 (1392)
Q Consensus 649 ~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~ 727 (1392)
+.+..++++++++|+++.+|...... ...+ ..++.+++++.|+..... ........++.+.+++++|.+++++++
T Consensus 228 ~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~g~l~~~i~~ 303 (330)
T 1tt7_A 228 KQLASLLSKIQYGGSVAVSGLTGGGE-VPATVYPFILRGVSLLGIDSVYC---PMDVRAAVWERMSSDLKPDQLLTIVDR 303 (330)
T ss_dssp HHHHHHHTTEEEEEEEEECCCSSCSC-EEECSHHHHTSCCEEEECCSSSC---CHHHHHHHHHHTTTTSCCSCSTTSEEE
T ss_pred HHHHHHHHhhcCCCEEEEEecCCCCc-cCcchHHHHhcCeEEEEEecccc---CHHHHHHHHHHHHHHHhcCCcccccce
Confidence 89999999999999999999653211 1122 234678999999753211 122233445556667788999999999
Q ss_pred eeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 728 IFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 728 vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+|+++++++||+.+.++++.||+||++
T Consensus 304 ~~~l~~~~~A~~~~~~~~~~gKvvi~~ 330 (330)
T 1tt7_A 304 EVSLEETPGALKDILQNRIQGRVIVKL 330 (330)
T ss_dssp EECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred EEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 999999999999999999999999863
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-36 Score=356.27 Aligned_cols=294 Identities=17% Similarity=0.257 Sum_probs=246.4
Q ss_pred eccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-
Q psy1119 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR- 505 (1392)
Q Consensus 427 ~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~- 505 (1392)
...+|. .+++.+.|.|. ++++||+|||.|+|||++|++.+.|.++.. ...|.++|||++|+|+
T Consensus 6 ~~~~g~--~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~------~~~p~v~GhE~~G~V~~ 69 (339)
T 1rjw_A 6 VEQFKE--PLKIKEVEKPT--------ISYGEVLVRIKACGVCHTDLHAAHGDWPVK------PKLPLIPGHEGVGIVEE 69 (339)
T ss_dssp BSSTTS--CCEEEECCCCC--------CCTTEEEEEEEEEEECHHHHHHHHTCSSSC------CCSSBCCCSCEEEEEEE
T ss_pred EcCCCC--CcEEEEeeCCC--------CCCCEEEEEEEEEeEchhhHHHhcCCCCcC------CCCCeeccccceEEEEE
Confidence 334553 37888888875 689999999999999999999999976521 1247899999999997
Q ss_pred --------eCCCeEEEe----------------------------ecCCcccceEEecccceEEcCCCCCHhhHhhhhHH
Q psy1119 506 --------DSGKRVMGL----------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCV 549 (1392)
Q Consensus 506 --------~vGdrV~gl----------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~ 549 (1392)
++||||+.. ...|+|+||+.+|+..++++|+++|+++||+++++
T Consensus 70 vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~ 149 (339)
T 1rjw_A 70 VGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCA 149 (339)
T ss_dssp ECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTH
T ss_pred ECCCCCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhh
Confidence 478999752 13589999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHH
Q psy1119 550 YATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQL 629 (1392)
Q Consensus 550 ~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~ 629 (1392)
++|||+++... ++++|++|||+|| |++|++++|+|+..|++|+++++++++++++++ +++++++|+++.++.+.
T Consensus 150 ~~ta~~~l~~~-~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~~~d~~~~~~~~~ 223 (339)
T 1rjw_A 150 GVTTYKALKVT-GAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----LGADLVVNPLKEDAAKF 223 (339)
T ss_dssp HHHHHHHHHHH-TCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCSEEECTTTSCHHHH
T ss_pred HHHHHHHHHhc-CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----CCCCEEecCCCccHHHH
Confidence 99999999655 8999999999988 889999999999999999999999999999976 67889999988889899
Q ss_pred HHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCcccc-ccccCCCcEEEEEechhhhhhCHHHHHH
Q psy1119 630 VMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVMLDNFFFAEQEWKMS 707 (1392)
Q Consensus 630 i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~ 707 (1392)
+++.+ .|+|+|||+++. +.++.++++++++|+++.+|..... ..++ ..++.+++++.|+.... . .
T Consensus 224 ~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~-----~----~ 290 (339)
T 1rjw_A 224 MKEKV--GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEE--MPIPIFDTVLNGIKIIGSIVGT-----R----K 290 (339)
T ss_dssp HHHHH--SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSE--EEEEHHHHHHTTCEEEECCSCC-----H----H
T ss_pred HHHHh--CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC--CccCHHHHHhCCcEEEEeccCC-----H----H
Confidence 98888 489999999986 7889999999999999999975421 1111 23456899999875432 1 2
Q ss_pred HHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEecC
Q psy1119 708 LQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRD 756 (1392)
Q Consensus 708 ~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~ 756 (1392)
.+..+.+++.+|.+++. +++|+++++++||+.+.+++..||+||++++
T Consensus 291 ~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 338 (339)
T 1rjw_A 291 DLQEALQFAAEGKVKTI-IEVQPLEKINEVFDRMLKGQINGRVVLTLED 338 (339)
T ss_dssp HHHHHHHHHHTTSCCCC-EEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred HHHHHHHHHHcCCCCcc-EEEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 23445678899999986 5789999999999999999989999998753
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-37 Score=361.51 Aligned_cols=295 Identities=22% Similarity=0.290 Sum_probs=245.5
Q ss_pred eccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-
Q psy1119 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR- 505 (1392)
Q Consensus 427 ~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~- 505 (1392)
...+|.+ +++.+.|.|. ++++||+|||.|+|||+.|++++.|.++.. .....|.++|||++|+|+
T Consensus 6 ~~~~g~~--l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~----~~~~~p~v~G~E~~G~V~~ 71 (343)
T 2dq4_A 6 KLAPEEG--LTLVDRPVPE--------PGPGEILVRVEAASICGTDLHIWKWDAWAR----GRIRPPLVTGHEFSGVVEA 71 (343)
T ss_dssp ECSSSSS--CEEEECCCCC--------CCTTEEEEEEEEEECCHHHHHHHTTCHHHH----HHCCSSEECCCEEEEEEEE
T ss_pred EeCCCCc--EEEEeccCCC--------CCCCEEEEEEEEEeechhhHHHHcCCCCcc----ccCCCCCcCCccceEEEEE
Confidence 3445543 8889988875 689999999999999999999999865421 012347899999999997
Q ss_pred --------eCCCeEEEe---------------------------ecCCcccceEEecccceEEcCCCCCHhhHhhhhHHH
Q psy1119 506 --------DSGKRVMGL---------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVY 550 (1392)
Q Consensus 506 --------~vGdrV~gl---------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~ 550 (1392)
++||||++. ...|+|+||+++|+..++++|+++|+++||+++ ++
T Consensus 72 vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~ 150 (343)
T 2dq4_A 72 VGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILE-PF 150 (343)
T ss_dssp ECTTCCSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTHH-HH
T ss_pred ECCCCCcCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhhh-HH
Confidence 468999874 245899999999999999999999999999884 78
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHH
Q psy1119 551 ATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQL 629 (1392)
Q Consensus 551 ~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~ 629 (1392)
+|||+++...+++ +|++|||+|| |++|++++|+|+.+|+ +|++++++++|++++++ + +++++|+++.++.+.
T Consensus 151 ~ta~~~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~----l-a~~v~~~~~~~~~~~ 223 (343)
T 2dq4_A 151 GNAVHTVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP----Y-ADRLVNPLEEDLLEV 223 (343)
T ss_dssp HHHHHHHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT----T-CSEEECTTTSCHHHH
T ss_pred HHHHHHHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----h-HHhccCcCccCHHHH
Confidence 8999999658899 9999999998 9999999999999999 99999999999988865 6 889999998899999
Q ss_pred HHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCcccc--ccccCCCcEEEEEechhhhhhCHHHHH
Q psy1119 630 VMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLG--MEVFMRETSFHGVMLDNFFFAEQEWKM 706 (1392)
Q Consensus 630 i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~--~~~~~k~~s~~g~~~~~~~~~~~~~~~ 706 (1392)
+++.| ++|+|+|||++++ +.++.++++++++|+++.+|.... ...++ ..++.+++++.|+.... . .
T Consensus 224 ~~~~~-~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~--~~~~~~~~~~~~~~~~i~g~~~~~---~-~---- 292 (343)
T 2dq4_A 224 VRRVT-GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSD--PIRFDLAGELVMRGITAFGIAGRR---L-W---- 292 (343)
T ss_dssp HHHHH-SSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS--CEEECHHHHTGGGTCEEEECCSCC---T-T----
T ss_pred HHHhc-CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC--CceeCcHHHHHhCceEEEEeecCC---C-H----
Confidence 99999 7899999999987 788999999999999999997432 22222 24567899999975431 1 1
Q ss_pred HHHHHHHHHHHcCC--CCCcceeeeccccHHHHHHHHHcCCccceEEEEec
Q psy1119 707 SLQKALQKAIDAGA--VQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 707 ~~~~~~~~~l~~g~--l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
..+..+.+++++|+ ++++++++|+++++++||+.+.+++. ||+||+++
T Consensus 293 ~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~ 342 (343)
T 2dq4_A 293 QTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK 342 (343)
T ss_dssp HHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred HHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence 22344567788898 46678899999999999999999887 99999864
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-37 Score=375.95 Aligned_cols=304 Identities=21% Similarity=0.279 Sum_probs=250.0
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhh--hh--h------hccccc-cccceeeEE
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEV--IE--S------RRLYQH-CVIGFEYSG 502 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~--~~--~------~~~~~p-~~lG~E~sG 502 (1392)
..+++.+.|.|. ++++||+|||.|+|||++|++...+...... .. + .....| .++|||++|
T Consensus 56 ~~l~~~e~p~P~--------~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~P~~v~GhE~~G 127 (456)
T 3krt_A 56 KSIHLDDVPVPE--------LGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAG 127 (456)
T ss_dssp HHCEEEEECCCC--------CCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHHTSCHHHHTTCCSEEECCSCCEE
T ss_pred CCcEEEEccCCC--------CCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhccccccccccCCCCcccccceeEE
Confidence 578899998876 7999999999999999999987655321110 00 0 011235 689999999
Q ss_pred EEe---------eCCCeEEEee---------------------------cCCcccceEEecccceEEcCCCCCHhhHhhh
Q psy1119 503 RLR---------DSGKRVMGLT---------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATV 546 (1392)
Q Consensus 503 vV~---------~vGdrV~gl~---------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~l 546 (1392)
+|+ ++||||++.. ..|+|+||+++++..++++|+++|+++||++
T Consensus 128 ~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~l 207 (456)
T 3krt_A 128 VVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAP 207 (456)
T ss_dssp EEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSEEEEEGGGEEECCTTSCHHHHHSS
T ss_pred EEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCcccceEEechHHeeECCCCCCHHHHHHh
Confidence 997 4689998742 1489999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCc
Q psy1119 547 PCVYATAVYAMFIC--GQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDT 624 (1392)
Q Consensus 547 p~~~~TA~~aL~~~--a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~ 624 (1392)
+++++|||+++... +++++|++|||+||+|+||++++|+|++.|++|++++++++|++++++ +|+++++|+++.
T Consensus 208 ~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~----lGa~~vi~~~~~ 283 (456)
T 3krt_A 208 GLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRA----MGAEAIIDRNAE 283 (456)
T ss_dssp HHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCCEEEETTTT
T ss_pred hhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHh----hCCcEEEecCcC
Confidence 99999999999754 789999999999999999999999999999999999999999999976 688999998775
Q ss_pred c-----------------HHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCc
Q psy1119 625 S-----------------FEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRET 687 (1392)
Q Consensus 625 ~-----------------~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~ 687 (1392)
+ +.+.+++.|+|+|+|+|||+++++.+..++++++++|+++.+|.............++.+++
T Consensus 284 d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~ 363 (456)
T 3krt_A 284 GYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSGYMHEYDNRYLWMSLK 363 (456)
T ss_dssp TCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEEEEEEESCCTTCSEEEEEHHHHHHTTC
T ss_pred cccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCCcEEEEEecCCCcccccCHHHHHhcCe
Confidence 4 45889999999999999999999999999999999999999996543211111123456778
Q ss_pred EEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEecCCC
Q psy1119 688 SFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEE 758 (1392)
Q Consensus 688 s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~~~ 758 (1392)
++.|...... . .+ ..+.+++++|+++|+++++|+++++++||+.+.+++..||+||.+.+++
T Consensus 364 ~i~g~~~~~~----~----~~-~~~~~l~~~g~l~~~i~~~~~l~~~~eA~~~l~~~~~~GKvvv~~~~~~ 425 (456)
T 3krt_A 364 RIIGSHFANY----R----EA-WEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGVLCLAPE 425 (456)
T ss_dssp EEEECCSCCH----H----HH-HHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEESSCSS
T ss_pred EEEEeccCCH----H----HH-HHHHHHHHcCCcccceeEEEcHHHHHHHHHHHHhCCCCCcEEEEeCCCC
Confidence 8888765432 1 11 2356788999999999999999999999999999999999999886543
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-36 Score=358.98 Aligned_cols=295 Identities=20% Similarity=0.264 Sum_probs=243.4
Q ss_pred eccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHH-HhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIM-LTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 427 ~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~-~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
...+|. .+++.+.|.|. ++++||+|||.|+|||+.|++ ++.|.++. ..|.++|||++|+|+
T Consensus 14 ~~~~~~--~l~~~~~~~p~--------~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~--------~~P~v~GhE~~G~V~ 75 (374)
T 1cdo_A 14 AWEANK--PLVIEEIEVDV--------PHANEIRIKIIATGVCHTDLYHLFEGKHKD--------GFPVVLGHEGAGIVE 75 (374)
T ss_dssp BCSTTS--CCEEEEEEECC--------CCTTEEEEEEEEEECCHHHHHHHHTTCCTT--------SCSEECCCCEEEEEE
T ss_pred EecCCC--CeEEEEeeCCC--------CCCCEEEEEEeEEeechhhHHHHhCCCCCC--------CCCcccCccceEEEE
Confidence 344443 37788888775 689999999999999999999 89887651 137899999999997
Q ss_pred ---------eCCCeEEEee------------------------------------------------cCCcccceEEecc
Q psy1119 506 ---------DSGKRVMGLT------------------------------------------------SGRSLANCCETDV 528 (1392)
Q Consensus 506 ---------~vGdrV~gl~------------------------------------------------~~g~~a~~v~~~~ 528 (1392)
++||||++.. ..|+|+||+++|+
T Consensus 76 ~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~ 155 (374)
T 1cdo_A 76 SVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQ 155 (374)
T ss_dssp EECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEG
T ss_pred EECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEch
Confidence 4689998642 1389999999999
Q ss_pred cceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q psy1119 529 EMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIR 607 (1392)
Q Consensus 529 ~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~ 607 (1392)
..++++|+++|+++||+++++++|||+++...+++++|++|||+|+ |++|++++|+|+++|+ +|++++.+++|+++++
T Consensus 156 ~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~ 234 (374)
T 1cdo_A 156 IAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK 234 (374)
T ss_dssp GGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred hheEECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 9999999999999999999999999999988899999999999975 9999999999999999 8999999999999998
Q ss_pred HHCCCCCcCceeeCCC--ccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCC-eEEEEEcccccccCcccc-ccc
Q psy1119 608 KTFPFIKEENIGNSRD--TSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQG-GRFLEIGKFDLANNNMLG-MEV 682 (1392)
Q Consensus 608 ~~~p~l~~~~i~~s~~--~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~-Gr~v~iG~~~~~~~~~l~-~~~ 682 (1392)
+ +++++++|+++ .++.+.+++.+++ |+|+|||++++ +.++.++++++++ |+++.+|.... ....++ ..+
T Consensus 235 ~----lGa~~vi~~~~~~~~~~~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~-~~~~~~~~~~ 308 (374)
T 1cdo_A 235 V----FGATDFVNPNDHSEPISQVLSKMTNG-GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL-HDVATRPIQL 308 (374)
T ss_dssp H----TTCCEEECGGGCSSCHHHHHHHHHTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSS-SCEEECHHHH
T ss_pred H----hCCceEEeccccchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCC-CCcccCHHHH
Confidence 6 68899999875 5788999999987 99999999986 6789999999999 99999997542 111122 234
Q ss_pred cCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 683 FMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 683 ~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+.++ ++.|+.+..+. . ...+..+.+++.+|++++ +++++|+++++++||+.+.+++. +|+||++
T Consensus 309 ~~~~-~i~g~~~~~~~---~---~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~ 374 (374)
T 1cdo_A 309 IAGR-TWKGSMFGGFK---G---KDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL 374 (374)
T ss_dssp HTTC-EEEECSGGGCC---H---HHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred hcCC-eEEEEecCCCC---c---HHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence 4566 88887543211 1 123455667889999874 67899999999999999998875 7999874
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-37 Score=374.64 Aligned_cols=303 Identities=23% Similarity=0.301 Sum_probs=246.7
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChh-----------hhhhhccccc-cccceeeE
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPE-----------VIESRRLYQH-CVIGFEYS 501 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~-----------~~~~~~~~~p-~~lG~E~s 501 (1392)
+.+++.+.|.|. ++++||+|||.|+|||++|++...+..... .++ .....| .++|||++
T Consensus 48 ~~l~~~e~p~P~--------~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~P~~v~GhE~~ 118 (447)
T 4a0s_A 48 KSLRLGEVPMPE--------LAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWA-TRHDQPYHVLGSDCS 118 (447)
T ss_dssp HHCEEEEEECCC--------CCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTTCGGG-GGGCCSEEECCSCEE
T ss_pred CCceEEeccCCC--------CCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcccCccc-cccCCCCccccccee
Confidence 468899998876 799999999999999999987654321000 000 011234 68999999
Q ss_pred EEEe---------eCCCeEEEee---------------------------cCCcccceEEecccceEEcCCCCCHhhHhh
Q psy1119 502 GRLR---------DSGKRVMGLT---------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAAT 545 (1392)
Q Consensus 502 GvV~---------~vGdrV~gl~---------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~ 545 (1392)
|+|+ ++||||++.. ..|+|+||++++++.++++|+++|+++||+
T Consensus 119 G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~~~~iP~~ls~~~aA~ 198 (447)
T 4a0s_A 119 GVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAV 198 (447)
T ss_dssp EEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSEEEEEGGGEEECCTTSCHHHHHT
T ss_pred EEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeeeeecCHHHcEECCCCCCHHHHHH
Confidence 9997 4789998753 148999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHH--hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCC
Q psy1119 546 VPCVYATAVYAMFI--CGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRD 623 (1392)
Q Consensus 546 lp~~~~TA~~aL~~--~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~ 623 (1392)
+|++++|||+++.. .+++++|++|||+||+|+||++++|+|++.|++|++++++++|++++++ +++++++|+.+
T Consensus 199 l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~----lGa~~~i~~~~ 274 (447)
T 4a0s_A 199 SPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA----LGCDLVINRAE 274 (447)
T ss_dssp SHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCCCEEEHHH
T ss_pred hHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCCEEEeccc
Confidence 99999999999974 3899999999999999999999999999999999999999999999976 68899998765
Q ss_pred cc------------------HHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCC
Q psy1119 624 TS------------------FEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMR 685 (1392)
Q Consensus 624 ~~------------------~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k 685 (1392)
.+ +.+.+++.+ |+|+|+|||+++++.++.++++++++|+++.+|.............++.+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~ 353 (447)
T 4a0s_A 275 LGITDDIADDPRRVVETGRKLAKLVVEKA-GREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSGYLHTFDNRYLWMK 353 (447)
T ss_dssp HTCCTTGGGCHHHHHHHHHHHHHHHHHHH-SSCCSEEEECSCHHHHHHHHHHSCTTCEEEESCCTTCSEEEEEHHHHHHT
T ss_pred ccccccccccccccchhhhHHHHHHHHHh-CCCceEEEECCCchHHHHHHHHHhcCCEEEEEecCCCcccccCHHHHHhC
Confidence 43 367888888 78999999999999999999999999999999965322111112234567
Q ss_pred CcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEecCCCC
Q psy1119 686 ETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEP 759 (1392)
Q Consensus 686 ~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~~~~ 759 (1392)
++++.|...... . ....+.+++++|+++|+++++|+++++++||+.+.+++..||+||.+.+++.
T Consensus 354 ~~~i~g~~~~~~-----~----~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~GKvvv~~~~~~~ 418 (447)
T 4a0s_A 354 LKKIVGSHGANH-----E----EQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVLCMAPEQ 418 (447)
T ss_dssp TCEEEECCSCCH-----H----HHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEESSCCST
T ss_pred CCEEEecCCCCH-----H----HHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHhcCCCceEEEEEeCCCCC
Confidence 888888754431 1 1224567889999999999999999999999999999999999998865543
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-36 Score=359.31 Aligned_cols=295 Identities=20% Similarity=0.262 Sum_probs=242.6
Q ss_pred eeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
....+|. .+++.+.|.|. ++++||+|||.|+|||+.|++++.|. +.. ..|.++|||++|+|+
T Consensus 13 ~~~~~g~--~l~~~~~~~p~--------~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~-------~~P~v~GhE~~G~V~ 74 (376)
T 1e3i_A 13 IAWKTGS--PLCIEEIEVSP--------PKACEVRIQVIATCVCPTDINATDPK-KKA-------LFPVVLGHECAGIVE 74 (376)
T ss_dssp EBCSTTS--CCEEEEEEECC--------CCTTEEEEEEEEEECCHHHHHTTCTT-SCC-------CSSBCCCCEEEEEEE
T ss_pred EEecCCC--CeEEEEeeCCC--------CCCCeEEEEEeEEeEchhhHHHhcCC-CCC-------CCCcccCccccEEEE
Confidence 3344553 37788888775 68999999999999999999999886 321 247899999999997
Q ss_pred ---------eCCCeEEEee----------------------------------------------------cCCcccceE
Q psy1119 506 ---------DSGKRVMGLT----------------------------------------------------SGRSLANCC 524 (1392)
Q Consensus 506 ---------~vGdrV~gl~----------------------------------------------------~~g~~a~~v 524 (1392)
++||||++.. ..|+|+||+
T Consensus 75 ~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~ 154 (376)
T 1e3i_A 75 SVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYT 154 (376)
T ss_dssp EECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEE
T ss_pred EECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEE
Confidence 4789998641 128999999
Q ss_pred EecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhH
Q psy1119 525 ETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKR 603 (1392)
Q Consensus 525 ~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~ 603 (1392)
++|+..++++|+++|+++||+++++++|||+++...+++++|++|||+|+ |+||++++|+|+++|+ +|++++.+++|+
T Consensus 155 ~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~ 233 (376)
T 1e3i_A 155 VVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF 233 (376)
T ss_dssp EEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred EeccccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 99999999999999999999999999999999988899999999999975 9999999999999999 899999999999
Q ss_pred HHHHHHCCCCCcCceeeCCC--ccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCC-eEEEEEcccccccCcccc
Q psy1119 604 EFIRKTFPFIKEENIGNSRD--TSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQG-GRFLEIGKFDLANNNMLG 679 (1392)
Q Consensus 604 ~~l~~~~p~l~~~~i~~s~~--~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~-Gr~v~iG~~~~~~~~~l~ 679 (1392)
+++++ +++++++|+++ .++.+.+++.|++ |+|+|||++++ +.++.++++++++ |+++.+|... . ...+.
T Consensus 234 ~~a~~----lGa~~vi~~~~~~~~~~~~v~~~~~~-g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~-~-~~~~~ 306 (376)
T 1e3i_A 234 PKAKA----LGATDCLNPRELDKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV-D-EMTIP 306 (376)
T ss_dssp HHHHH----TTCSEEECGGGCSSCHHHHHHHHHTS-CBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS-S-EEEEE
T ss_pred HHHHH----hCCcEEEccccccchHHHHHHHHhCC-CccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCC-C-ccccC
Confidence 99976 78899999875 6799999999987 99999999986 6789999999999 9999999632 1 11122
Q ss_pred -ccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 680 -MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 680 -~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
..++.++ ++.|+.+.... . ...+..+.+++.+|++++ +++++|+++++++||+.+.+++ .+|+||++
T Consensus 307 ~~~~~~~~-~i~g~~~~~~~---~---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~Kvvi~~ 376 (376)
T 1e3i_A 307 TVDVILGR-SINGTFFGGWK---S---VDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGK-SIRTILTF 376 (376)
T ss_dssp HHHHHTTC-EEEECSGGGCC---H---HHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTC-CSEEEEEC
T ss_pred HHHhhccC-eEEEEecCCCC---c---HHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCC-cceEEEeC
Confidence 2344567 88887543211 1 123455667888999874 6789999999999999998887 47999864
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-36 Score=358.98 Aligned_cols=297 Identities=16% Similarity=0.223 Sum_probs=244.0
Q ss_pred eccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-
Q psy1119 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR- 505 (1392)
Q Consensus 427 ~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~- 505 (1392)
...+|. .+++.+.|.|. ++++||+|||.|+|||+.|++++.|.++.. ..|.++|||++|+|+
T Consensus 12 ~~~~~~--~l~~~~~~~p~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-------~~P~v~GhE~~G~V~~ 74 (373)
T 2fzw_A 12 AWEAGK--PLSIEEIEVAP--------PKAHEVRIKIIATAVCHTDAYTLSGADPEG-------CFPVILGHLGAGIVES 74 (373)
T ss_dssp BCSTTS--CCEEEEEEECC--------CCTTEEEEEEEEEECCHHHHHHHHTCCTTC-------CSSBCCCCEEEEEEEE
T ss_pred EecCCC--CcEEEEeeCCC--------CCCCEEEEEEEEEEEchhhHHHhcCCCCCC-------CCCccccccccEEEEE
Confidence 334443 37788887775 689999999999999999999999976531 247899999999997
Q ss_pred --------eCCCeEEEee------------------------------------------------cCCcccceEEeccc
Q psy1119 506 --------DSGKRVMGLT------------------------------------------------SGRSLANCCETDVE 529 (1392)
Q Consensus 506 --------~vGdrV~gl~------------------------------------------------~~g~~a~~v~~~~~ 529 (1392)
++||||++.. ..|+|+||+++|+.
T Consensus 75 vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~ 154 (373)
T 2fzw_A 75 VGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADI 154 (373)
T ss_dssp ECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGG
T ss_pred ECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchh
Confidence 4789998642 13899999999999
Q ss_pred ceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHH
Q psy1119 530 MAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRK 608 (1392)
Q Consensus 530 ~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~ 608 (1392)
.++++|+++|+++||+++++++|||+++...+++++|++|||+|+ |++|++++|+|+++|+ +|++++.+++|++++++
T Consensus 155 ~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 155 SVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE 233 (373)
T ss_dssp GEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred heEECCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 999999999999999999999999999988899999999999975 9999999999999999 89999999999999986
Q ss_pred HCCCCCcCceeeCCC--ccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCC-eEEEEEcccccccCcccc-cccc
Q psy1119 609 TFPFIKEENIGNSRD--TSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQG-GRFLEIGKFDLANNNMLG-MEVF 683 (1392)
Q Consensus 609 ~~p~l~~~~i~~s~~--~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~-Gr~v~iG~~~~~~~~~l~-~~~~ 683 (1392)
+++++++|+++ .++.+.+++.+++ |+|+|||++++ +.++.++++++++ |+++.+|.........+. ..++
T Consensus 234 ----lGa~~vi~~~~~~~~~~~~v~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~ 308 (373)
T 2fzw_A 234 ----FGATECINPQDFSKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLV 308 (373)
T ss_dssp ----HTCSEEECGGGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHH
T ss_pred ----cCCceEeccccccccHHHHHHHHhCC-CCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHh
Confidence 67899999875 5789999999987 99999999986 6789999999999 999999965321111122 2334
Q ss_pred CCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 684 MRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 684 ~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
.++ ++.|..+..+. . ...+..+.+++.+|++++ +++++|+++++++||+.+.+++. +|+||++
T Consensus 309 ~~~-~i~g~~~~~~~---~---~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~ 373 (373)
T 2fzw_A 309 TGR-TWKGTAFGGWK---S---VESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI 373 (373)
T ss_dssp TTC-EEEECSGGGCC---H---HHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred cCC-EEEEeccCCCC---c---HHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 566 88887543211 1 123455667888999874 67899999999999999998876 6999864
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-36 Score=359.64 Aligned_cols=295 Identities=19% Similarity=0.210 Sum_probs=242.6
Q ss_pred eeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
....+|. .+++.+.|.|. ++++||+|||.|+|||+.|++++.|.++. ..|.++|||++|+|+
T Consensus 14 ~~~~~g~--~l~~~~~~~p~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--------~~P~v~GhE~~G~V~ 75 (373)
T 1p0f_A 14 VAWEPHK--PLSLETITVAP--------PKAHEVRIKILASGICGSDSSVLKEIIPS--------KFPVILGHEAVGVVE 75 (373)
T ss_dssp EBSSTTS--CCEEEEEEECC--------CCTTEEEEEEEEEECCHHHHHHHTTSSCC--------CSSBCCCCCEEEEEE
T ss_pred EEEcCCC--CeeEEEeeCCC--------CCCCeEEEEEeEEeecchhHHHhcCCCCC--------CCCcccCcCceEEEE
Confidence 3444553 37888888775 68999999999999999999999987641 237899999999997
Q ss_pred ---------eCCCeEEEee------------------------------------------------cCCcccceEEecc
Q psy1119 506 ---------DSGKRVMGLT------------------------------------------------SGRSLANCCETDV 528 (1392)
Q Consensus 506 ---------~vGdrV~gl~------------------------------------------------~~g~~a~~v~~~~ 528 (1392)
++||||++.. ..|+|+||+++|+
T Consensus 76 ~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~ 155 (373)
T 1p0f_A 76 SIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVAD 155 (373)
T ss_dssp EECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEET
T ss_pred EECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEch
Confidence 4789998642 1389999999999
Q ss_pred cceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q psy1119 529 EMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIR 607 (1392)
Q Consensus 529 ~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~ 607 (1392)
..++++|+++|++ ||+++++++|||+++...+++++|++|||+|+ |+||++++|+|+++|+ +|++++.+++|+++++
T Consensus 156 ~~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 233 (373)
T 1p0f_A 156 IAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI 233 (373)
T ss_dssp TSEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred hhEEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence 9999999999999 99999999999999988899999999999975 9999999999999999 8999999999999998
Q ss_pred HHCCCCCcCceeeCCC--ccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCC-eEEEEEcccccccCccccc-cc
Q psy1119 608 KTFPFIKEENIGNSRD--TSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQG-GRFLEIGKFDLANNNMLGM-EV 682 (1392)
Q Consensus 608 ~~~p~l~~~~i~~s~~--~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~-Gr~v~iG~~~~~~~~~l~~-~~ 682 (1392)
+ +|+++++|+++ .++.+.+++.|++ |+|+|||++++ +.++.++++++++ |+++.+|.........+.. .+
T Consensus 234 ~----lGa~~vi~~~~~~~~~~~~i~~~t~g-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~ 308 (373)
T 1p0f_A 234 E----LGATECLNPKDYDKPIYEVICEKTNG-GVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLL 308 (373)
T ss_dssp H----TTCSEEECGGGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHH
T ss_pred H----cCCcEEEecccccchHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHh
Confidence 6 78899999875 6799999999987 99999999986 6889999999999 9999999653211111222 23
Q ss_pred cCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCC--CcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 683 FMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQ--PLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 683 ~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+.++ ++.|+.+..+. + ..+..+.+++++|+++ ++++++|+++++++||+.+.+++. +|+||++
T Consensus 309 ~~~~-~i~g~~~~~~~---~----~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~ 373 (373)
T 1p0f_A 309 LTGR-SLKGSVFGGFK---G----EEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY 373 (373)
T ss_dssp HTTC-EEEECSGGGCC---G----GGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred ccCc-eEEeeccCCcC---H----HHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence 4566 88887543211 1 1234456778899987 467899999999999999988775 7999864
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-36 Score=356.47 Aligned_cols=299 Identities=16% Similarity=0.136 Sum_probs=241.7
Q ss_pred eccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee
Q psy1119 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD 506 (1392)
Q Consensus 427 ~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~ 506 (1392)
...+| .+++.|.|.|+. ++||||+|||+|+|||++|++.+.|..+.. .|.++|||++|+|++
T Consensus 6 ~~~~g---~l~v~e~p~P~~-------~~~~eVlVkv~a~gi~~sD~~~~~g~~~~~--------~P~i~G~E~~G~V~~ 67 (346)
T 4a2c_A 6 NDTDG---IVRVAESVIPEI-------KHQDEVRVKIASSGLCGSDLPRIFKNGAHY--------YPITLGHEFSGYIDA 67 (346)
T ss_dssp ECSSS---CEEEEECCCCCC-------CSTTEEEEEEEEEECCTTHHHHHHSSCSSS--------SSBCCCCEEEEEEEE
T ss_pred EecCC---CEEEEEEeCCCC-------CCcCEEEEEEEEEEECHHHHHHHcCCCCCC--------CCccccEEEEEEEEE
Confidence 34455 578999999862 478999999999999999999998875432 478999999999984
Q ss_pred ---------CCCeEEEe---------------------------ecCCcccceEEecccceEEcCCCCCHhhHhhhhHHH
Q psy1119 507 ---------SGKRVMGL---------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVY 550 (1392)
Q Consensus 507 ---------vGdrV~gl---------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~ 550 (1392)
+||||.+. ..+|+|+||+++|++.++++|+++|+++||+++ ++
T Consensus 68 vG~~V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~ 146 (346)
T 4a2c_A 68 VGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PI 146 (346)
T ss_dssp ECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HH
T ss_pred ECCCcccccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhch-HH
Confidence 56777653 235899999999999999999999999999886 34
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEE-EEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHH
Q psy1119 551 ATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI-FTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQL 629 (1392)
Q Consensus 551 ~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V-~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~ 629 (1392)
|+++.+...+++++|++|||+|+ |++|++++|+|+++|+++ +++..+++|++++++ +|+++++|+++.++.+.
T Consensus 147 -~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa~~~i~~~~~~~~~~ 220 (346)
T 4a2c_A 147 -TVGLHAFHLAQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGAMQTFNSSEMSAPQM 220 (346)
T ss_dssp -HHHHHHHHHTTCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHH
T ss_pred -HHHHHHHHHhccCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCCeEEEeCCCCCHHHH
Confidence 44555557889999999999965 999999999999999975 566778889999886 79999999999999999
Q ss_pred HHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccC-cccc-ccccCCCcEEEEEechhhhhhCHHHHH
Q psy1119 630 VMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANN-NMLG-MEVFMRETSFHGVMLDNFFFAEQEWKM 706 (1392)
Q Consensus 630 i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~-~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~ 706 (1392)
++..|+++|+|+|+|+.+. +.++.++++++++|+++.+|....... .... ..++.|++++.|+..........
T Consensus 221 ~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~---- 296 (346)
T 4a2c_A 221 QSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPG---- 296 (346)
T ss_dssp HHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTC----
T ss_pred HHhhcccCCcccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchH----
Confidence 9999999999999999974 678999999999999999996532211 1111 24567899999975433211111
Q ss_pred HHHHHHHHHHHcCCCC--CcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 707 SLQKALQKAIDAGAVQ--PLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 707 ~~~~~~~~~l~~g~l~--pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+.++.+.+++++|+++ |+++++|+++++++||+.++++++.||+||.+
T Consensus 297 ~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P 346 (346)
T 4a2c_A 297 QEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP 346 (346)
T ss_dssp HHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred HHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence 2234455778889875 56889999999999999999999999999853
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-36 Score=356.93 Aligned_cols=305 Identities=20% Similarity=0.305 Sum_probs=253.6
Q ss_pred EeeccCCCC--CCceE-EeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeE
Q psy1119 425 INALVRGDM--SSLTW-EQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYS 501 (1392)
Q Consensus 425 l~~~~~G~l--~~l~~-~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~s 501 (1392)
+....+|.. +.+++ .+.|.|. ++++||+|||.|+|||+.|++++.|.++.. ...|.++|||++
T Consensus 27 ~~~~~~g~~~~~~l~~~~~~p~P~--------~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~------~~~P~i~G~E~~ 92 (362)
T 2c0c_A 27 LVVTRLSPNFREAVTLSRDCPVPL--------PGDGDLLVRNRFVGVNASDINYSAGRYDPS------VKPPFDIGFEGI 92 (362)
T ss_dssp EEECSCCSSHHHHEEEEEEEECCC--------CCTTEEEEEEEEEECCTTHHHHHTTTTCTT------CCSCEECCSEEE
T ss_pred EEEeecCCCccceeEEEeecCCCC--------CCCCeEEEEEEEeccCHHHHHHhcCCCCCC------CCCCCCCCceeE
Confidence 445556643 46888 8888875 689999999999999999999999976431 124789999999
Q ss_pred EEEee----------CCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEE
Q psy1119 502 GRLRD----------SGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILI 571 (1392)
Q Consensus 502 GvV~~----------vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI 571 (1392)
|+|++ +||||+++. .|+|+||+++|++.++++|+. + .++|+++++++|||+++...+++++|++|||
T Consensus 93 G~V~~vG~~V~~~~~vGdrV~~~~-~G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV 169 (362)
T 2c0c_A 93 GEVVALGLSASARYTVGQAVAYMA-PGSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLV 169 (362)
T ss_dssp EEEEEECTTGGGTCCTTCEEEEEC-SCCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEE
T ss_pred EEEEEECCCccCCCCCCCEEEEcc-CCcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEE
Confidence 99873 688998875 489999999999999999996 4 4677888999999999998899999999999
Q ss_pred EcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHH
Q psy1119 572 HAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKL 651 (1392)
Q Consensus 572 ~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l 651 (1392)
+||+|++|++++|+|+..|++|+++++++++++++++ +++++++|+++.++.+.+++.+ ++|+|+|||++++..+
T Consensus 170 ~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~~~~~~-~~g~D~vid~~g~~~~ 244 (362)
T 2c0c_A 170 TAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCDRPINYKTEPVGTVLKQEY-PEGVDVVYESVGGAMF 244 (362)
T ss_dssp TTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHC-TTCEEEEEECSCTHHH
T ss_pred eCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCcEEEecCChhHHHHHHHhc-CCCCCEEEECCCHHHH
Confidence 9999999999999999999999999999999999986 6889999999888988888877 4699999999999889
Q ss_pred HHHHhcccCCeEEEEEcccccccC---------ccccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCC
Q psy1119 652 QASVRCLAQGGRFLEIGKFDLANN---------NMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQ 722 (1392)
Q Consensus 652 ~~s~~~La~~Gr~v~iG~~~~~~~---------~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~ 722 (1392)
+.++++++++|+++.+|....... ..+...++.+++++.|+.+..+... ....+..+.+++++|+++
T Consensus 245 ~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~----~~~~~~~~~~l~~~g~l~ 320 (362)
T 2c0c_A 245 DLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSK----YQAAMSHLLEMCVSGDLV 320 (362)
T ss_dssp HHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGGG----HHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHhcCCEEEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEEhhhhhhh----HHHHHHHHHHHHHCCCeE
Confidence 999999999999999997542210 0112345678999999865443221 233456677889999999
Q ss_pred Ccce--------eeeccccHHHHHHHHHcCCccceEEEEec
Q psy1119 723 PLVR--------TIFPEDKVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 723 pl~~--------~vf~l~ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
+.+. +.|+++++++||+.+.+++..||+||+++
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 361 (362)
T 2c0c_A 321 CEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELP 361 (362)
T ss_dssp CCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECC
T ss_pred eeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcC
Confidence 8643 66899999999999999999999999874
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=356.58 Aligned_cols=297 Identities=16% Similarity=0.255 Sum_probs=244.3
Q ss_pred eeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
....+|. .+++.+.|.|. ++++||+|||.|+|||+.|++++.|.++.. .|.++|||++|+|+
T Consensus 13 ~~~~~g~--~l~~~~~~~p~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--------~P~v~GhE~~G~V~ 74 (374)
T 2jhf_A 13 VLWEEKK--PFSIEEVEVAP--------PKAHEVRIKMVATGICRSDDHVVSGTLVTP--------LPVIAGHEAAGIVE 74 (374)
T ss_dssp EBCSTTS--CCEEEEEEECC--------CCTTEEEEEEEEEECCHHHHHHHHTSSCCC--------SSBCCCCSEEEEEE
T ss_pred EEecCCC--ceEEEEccCCC--------CCCCeEEEEEeEEeechhhHHHHcCCCCCC--------CCcccCcCceEEEE
Confidence 3344443 37888888775 689999999999999999999999876421 37899999999997
Q ss_pred ---------eCCCeEEEee------------------------------------------------cCCcccceEEecc
Q psy1119 506 ---------DSGKRVMGLT------------------------------------------------SGRSLANCCETDV 528 (1392)
Q Consensus 506 ---------~vGdrV~gl~------------------------------------------------~~g~~a~~v~~~~ 528 (1392)
++||||++.. ..|+|+||+++|+
T Consensus 75 ~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~ 154 (374)
T 2jhf_A 75 SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDE 154 (374)
T ss_dssp EECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEG
T ss_pred EECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEch
Confidence 4789998642 1389999999999
Q ss_pred cceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q psy1119 529 EMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIR 607 (1392)
Q Consensus 529 ~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~ 607 (1392)
+.++++|+++|+++||+++++++|||+++...+++++|++|||+| +|++|++++|+|+++|+ +|++++.+++|+++++
T Consensus 155 ~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~ 233 (374)
T 2jhf_A 155 ISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK 233 (374)
T ss_dssp GGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred HHeEECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 999999999999999999999999999998889999999999997 59999999999999999 8999999999999997
Q ss_pred HHCCCCCcCceeeCCC--ccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCC-eEEEEEcccccccCcccc-ccc
Q psy1119 608 KTFPFIKEENIGNSRD--TSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQG-GRFLEIGKFDLANNNMLG-MEV 682 (1392)
Q Consensus 608 ~~~p~l~~~~i~~s~~--~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~-Gr~v~iG~~~~~~~~~l~-~~~ 682 (1392)
+ +++++++|+++ .++.+.+++.+++ |+|+|||+++. +.++.++++++++ |+++.+|.........+. ..+
T Consensus 234 ~----lGa~~vi~~~~~~~~~~~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~ 308 (374)
T 2jhf_A 234 E----VGATECVNPQDYKKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLL 308 (374)
T ss_dssp H----TTCSEEECGGGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHH
T ss_pred H----hCCceEecccccchhHHHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHH
Confidence 6 68899999875 5788999999987 99999999986 6789999999999 999999965321111122 234
Q ss_pred cCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCC--cceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 683 FMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQP--LVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 683 ~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~p--l~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+.++ ++.|..+..+. . ...+..+.+++++|++++ +++++|+++++++||+.+.+++. +|+||++
T Consensus 309 ~~~~-~i~g~~~~~~~---~---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~ 374 (374)
T 2jhf_A 309 LSGR-TWKGAIFGGFK---S---KDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF 374 (374)
T ss_dssp HTTC-EEEECSGGGCC---H---HHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred hcCC-eEEEeccCCCC---h---HHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence 4567 88887543211 1 123445667889999874 67899999999999999998875 7999864
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=359.12 Aligned_cols=283 Identities=15% Similarity=0.208 Sum_probs=236.1
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-------- 505 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-------- 505 (1392)
+.+++.+.|.|. ++++||+|||.|+|||+.|++.+.|.++.. ..|.++|||++|+|+
T Consensus 15 ~~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-------~~p~i~G~E~~G~V~~vG~~v~~ 79 (348)
T 3two_A 15 EHFKPHDFSRHA--------VGPRDVLIDILYAGICHSDIHSAYSEWKEG-------IYPMIPGHEIAGIIKEVGKGVKK 79 (348)
T ss_dssp SCCEEEEEEECC--------CCTTEEEEEEEEEEECHHHHHHHTTSSSCC-------CSSBCCCCCEEEEEEEECTTCCS
T ss_pred CCCeEEEeeCCC--------CCCCeEEEEEEEeeecccchhhhcCCCCCC-------CCCeecCcceeEEEEEECCCCCC
Confidence 458888888875 799999999999999999999999987542 247899999999997
Q ss_pred -eCCCeEEEee-------------------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhh
Q psy1119 506 -DSGKRVMGLT-------------------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVP 547 (1392)
Q Consensus 506 -~vGdrV~gl~-------------------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp 547 (1392)
++||||+... ..|+|+||+++|++.++++|+++|+++||+++
T Consensus 80 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~ 159 (348)
T 3two_A 80 FKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLL 159 (348)
T ss_dssp CCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGG
T ss_pred CCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhhh
Confidence 4789997521 12899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHH
Q psy1119 548 CVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFE 627 (1392)
Q Consensus 548 ~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~ 627 (1392)
+++.|||+++. .+++++|++|||+|+ |++|++++|+|+++|++|++++.+++|++++++ +|+++++ + +.+
T Consensus 160 ~~~~ta~~~l~-~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~v~-~-~~~-- 229 (348)
T 3two_A 160 CAGITTYSPLK-FSKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----MGVKHFY-T-DPK-- 229 (348)
T ss_dssp THHHHHHHHHH-HTTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----TTCSEEE-S-SGG--
T ss_pred hhHHHHHHHHH-hcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cCCCeec-C-CHH--
Confidence 99999999995 559999999999976 999999999999999999999999999999986 7889988 3 322
Q ss_pred HHHHHHcCCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCcccc-cccc-CCCcEEEEEechhhhhhCHHH
Q psy1119 628 QLVMKRTKGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVF-MRETSFHGVMLDNFFFAEQEW 704 (1392)
Q Consensus 628 ~~i~~~T~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~-~k~~s~~g~~~~~~~~~~~~~ 704 (1392)
.+ . +|+|+|||+++++ .++.++++|+++|+++.+|.........+. ..++ .+++++.|+.... ..
T Consensus 230 -~~----~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~-----~~- 297 (348)
T 3two_A 230 -QC----K-EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGG-----IK- 297 (348)
T ss_dssp -GC----C-SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCC-----HH-
T ss_pred -HH----h-cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCC-----HH-
Confidence 11 1 2899999999887 899999999999999999976412222122 3445 7899999986543 11
Q ss_pred HHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEecCC
Q psy1119 705 KMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDE 757 (1392)
Q Consensus 705 ~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~~ 757 (1392)
....+.+++++|+++|.. ++|+++++++||+.+.+++..||+||+++++
T Consensus 298 ---~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~ 346 (348)
T 3two_A 298 ---ETQEMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDMKKS 346 (348)
T ss_dssp ---HHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEGGGC
T ss_pred ---HHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEecCCc
Confidence 234456788899999854 7999999999999999999999999998653
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=363.98 Aligned_cols=289 Identities=17% Similarity=0.245 Sum_probs=242.5
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-------- 505 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-------- 505 (1392)
..+++.+.|.|. ++++||+|||.|+|||+.|++.+.|.++.. .|.++|||++|+|+
T Consensus 33 ~~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~--------~p~v~G~e~~G~V~~vG~~v~~ 96 (370)
T 4ej6_A 33 GNISVRNVGIPE--------PGPDDLLVKVEACGICGTDRHLLHGEFPST--------PPVTLGHEFCGIVVEAGSAVRD 96 (370)
T ss_dssp TEEEEEEEECCC--------CCTTEEEEEEEEEECCHHHHHHHTTSSCCC--------SSEECCCSEEEEEEEECTTCCS
T ss_pred CceEEEEccCCC--------CCCCeEEEEEEEEeecHHHHHHHcCCCCCC--------CCeecCcceEEEEEEECCCCCC
Confidence 368889988876 689999999999999999999999986432 47899999999997
Q ss_pred -eCCCeEEEe---------------------------ecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHH
Q psy1119 506 -DSGKRVMGL---------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAM 557 (1392)
Q Consensus 506 -~vGdrV~gl---------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL 557 (1392)
++||||++. ...|+|+||+++|+..++++|+++|+++|| ++.+++|||+++
T Consensus 97 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~ta~~~l 175 (370)
T 4ej6_A 97 IAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLACCLHGV 175 (370)
T ss_dssp SCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHHHHHHHHH
Confidence 478999862 235899999999999999999999999998 667999999999
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHH---H
Q psy1119 558 FICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMK---R 633 (1392)
Q Consensus 558 ~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~---~ 633 (1392)
..+++++|++|||+|+ |++|++++|+|+++|+ +|++++.+++|++++++ +|+++++|+++.++.+.+++ .
T Consensus 176 -~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~i~~~~~~ 249 (370)
T 4ej6_A 176 -DLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEE----VGATATVDPSAGDVVEAIAGPVGL 249 (370)
T ss_dssp -HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCSEEECTTSSCHHHHHHSTTSS
T ss_pred -HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCCEEECCCCcCHHHHHHhhhhc
Confidence 7889999999999976 9999999999999999 89999999999998887 68899999999999999998 7
Q ss_pred cCCCcceEEEecCc-hhHHHHHHhcccCCeEEEEEcccccccCccc-cccccCCCcEEEEEechhhhhhCHHHHHHHHHH
Q psy1119 634 TKGRGVDLVLNSLA-EEKLQASVRCLAQGGRFLEIGKFDLANNNML-GMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKA 711 (1392)
Q Consensus 634 T~g~GvDvVlds~~-~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l-~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~ 711 (1392)
|+| |+|+|||+++ ++.+..++++|+++|+++.+|.........+ ...++.+++++.|+.... .+ ...
T Consensus 250 ~~g-g~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~-----~~-----~~~ 318 (370)
T 4ej6_A 250 VPG-GVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINP-----FV-----HRR 318 (370)
T ss_dssp STT-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCT-----TC-----HHH
T ss_pred cCC-CCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccCh-----HH-----HHH
Confidence 877 9999999998 5689999999999999999997543222222 234567899999976432 11 345
Q ss_pred HHHHHHcCCCC--CcceeeeccccHHHHHHHHHcCC-ccceEEEEecC
Q psy1119 712 LQKAIDAGAVQ--PLVRTIFPEDKVEEAFRYMAAGK-HIGKVIIKIRD 756 (1392)
Q Consensus 712 ~~~~l~~g~l~--pl~~~vf~l~ev~eA~~~l~~g~-~~GKvVI~~~~ 756 (1392)
+.+++++|+++ ++++++|+++++++||+.+.+++ ..+|+|+++++
T Consensus 319 ~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~ 366 (370)
T 4ej6_A 319 AADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAER 366 (370)
T ss_dssp HHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC---
T ss_pred HHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcccc
Confidence 56788999885 46889999999999999998877 44688877643
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-36 Score=353.86 Aligned_cols=299 Identities=20% Similarity=0.237 Sum_probs=247.3
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
+....+|. .+++.+.|.|. ++++||+|||.|+|||+.|++++.|.++.. ...|.++|||++|+|
T Consensus 9 ~~~~~~g~--~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~------~~~p~v~G~E~~G~V 72 (347)
T 2hcy_A 9 VIFYESHG--KLEYKDIPVPK--------PKANELLINVKYSGVCHTDLHAWHGDWPLP------VKLPLVGGHEGAGVV 72 (347)
T ss_dssp EEESSTTC--CCEEEEEECCC--------CCTTEEEEEEEEEEECHHHHHHHHTCSSSC------CCSSEECCCEEEEEE
T ss_pred EEEeCCCC--CCEEEEeeCCC--------CCCCEEEEEEEEEEechhHHHHhcCCCCCC------CCCCcccCccceEEE
Confidence 34445553 37888888875 689999999999999999999999976521 124789999999999
Q ss_pred e---------eCCCeEEEe----------------------------ecCCcccceEEecccceEEcCCCCCHhhHhhhh
Q psy1119 505 R---------DSGKRVMGL----------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVP 547 (1392)
Q Consensus 505 ~---------~vGdrV~gl----------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp 547 (1392)
+ ++||||++. ...|+|+||+.+|+..++++|+++|+++||+++
T Consensus 73 ~~vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~ 152 (347)
T 2hcy_A 73 VGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPIL 152 (347)
T ss_dssp EEECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGG
T ss_pred EEECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHh
Confidence 7 478999752 125899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCC-CccH
Q psy1119 548 CVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSR-DTSF 626 (1392)
Q Consensus 548 ~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~-~~~~ 626 (1392)
++++|||+++. ..++++|++|||+||+|++|++++|+|+..|++|+++++++++.+.+++ +++++++|.. +.++
T Consensus 153 ~~~~ta~~~l~-~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~ 227 (347)
T 2hcy_A 153 CAGITVYKALK-SANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS----IGGEVFIDFTKEKDI 227 (347)
T ss_dssp THHHHHHHHHH-TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH----TTCCEEEETTTCSCH
T ss_pred hhHHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH----cCCceEEecCccHhH
Confidence 99999999995 4589999999999999999999999999999999999999999888876 5778888877 5788
Q ss_pred HHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHHHH
Q psy1119 627 EQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWK 705 (1392)
Q Consensus 627 ~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~~~ 705 (1392)
.+.+++.+.+ |+|+|+|+.+. +.++.++++++++|+++.+|.............++.+++++.|+.... .
T Consensus 228 ~~~~~~~~~~-~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~-----~--- 298 (347)
T 2hcy_A 228 VGAVLKATDG-GAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGN-----R--- 298 (347)
T ss_dssp HHHHHHHHTS-CEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCC-----H---
T ss_pred HHHHHHHhCC-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCC-----H---
Confidence 8899988887 99999999986 788999999999999999997532111111123456899999875432 1
Q ss_pred HHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEec
Q psy1119 706 MSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIR 755 (1392)
Q Consensus 706 ~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~ 755 (1392)
..+..+.+++++|++++. +++|+++++++||+.+.+++..||+||+++
T Consensus 299 -~~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 346 (347)
T 2hcy_A 299 -ADTREALDFFARGLVKSP-IKVVGLSTLPEIYEKMEKGQIVGRYVVDTS 346 (347)
T ss_dssp -HHHHHHHHHHHTTSCCCC-EEEEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred -HHHHHHHHHHHhCCCccc-eEEEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence 123445678899999986 578999999999999999988999999874
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=360.64 Aligned_cols=291 Identities=16% Similarity=0.139 Sum_probs=238.3
Q ss_pred CCCceEEeCCCC--------cccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 433 MSSLTWEQGPVN--------MKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 433 l~~l~~~~~~~~--------~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
+..+++.+.|.| . ++++||+|||+|+|||+.|++++.|..... .....|.++|||++|+|
T Consensus 17 ~~~l~~~~~~~P~~~~~~~~~--------~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~----~~~~~p~v~G~E~~G~V 84 (363)
T 3m6i_A 17 QHDLWISEASPSLESVQKGEE--------LKEGEVTVAVRSTGICGSDVHFWKHGCIGP----MIVECDHVLGHESAGEV 84 (363)
T ss_dssp TCCEEEEECSSCHHHHHHTCS--------CCTTEEEEEEEEEECCHHHHHHHHHSBSSS----CBCCSCEECCCEEEEEE
T ss_pred CCcEEEEEecCCccccccCCC--------cCCCeEEEEEeEEeecHhhHHHHcCCCCCC----ccCCCCcccCcceEEEE
Confidence 456899999988 5 689999999999999999999887432111 01124789999999999
Q ss_pred e---------eCCCeEEEee----------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhh
Q psy1119 505 R---------DSGKRVMGLT----------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVP 547 (1392)
Q Consensus 505 ~---------~vGdrV~gl~----------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp 547 (1392)
+ ++||||++.. ..|+|+||+.+|+..++++|+ +|+++||+++
T Consensus 85 ~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~aa~~~ 163 (363)
T 3m6i_A 85 IAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAMLE 163 (363)
T ss_dssp EEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHHHHHHH
T ss_pred EEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHHHHhhh
Confidence 7 4789998741 468999999999999999999 9999999884
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCCCcCceeeC-----
Q psy1119 548 CVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFIKEENIGNS----- 621 (1392)
Q Consensus 548 ~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l~~~~i~~s----- 621 (1392)
+++|||+++ ..+++++|++|||+|+ |+||++++|+|+++|++ |++++.+++|++++++ + +++++++
T Consensus 164 -~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----l-~~~~~~~~~~~~ 235 (363)
T 3m6i_A 164 -PLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE----I-CPEVVTHKVERL 235 (363)
T ss_dssp -HHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH----H-CTTCEEEECCSC
T ss_pred -HHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----h-chhccccccccc
Confidence 889999999 7889999999999977 99999999999999997 9999999999999987 3 3444443
Q ss_pred CCccHHHHHHHHcCCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhh
Q psy1119 622 RDTSFEQLVMKRTKGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFA 700 (1392)
Q Consensus 622 ~~~~~~~~i~~~T~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~ 700 (1392)
++.++.+.+++.|+|+|+|+|||+++++ .++.++++|+++|+++.+|....... .....++.+++++.+.... .
T Consensus 236 ~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~-~~~~~~~~~~~~i~g~~~~---~- 310 (363)
T 3m6i_A 236 SAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQ-IPFMRASVREVDLQFQYRY---C- 310 (363)
T ss_dssp CHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCC-CCHHHHHHHTCEEEECCSC---S-
T ss_pred chHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCcc-ccHHHHHhcCcEEEEccCC---H-
Confidence 2467889999999999999999999886 78999999999999999996532211 1122456688898887532 1
Q ss_pred CHHHHHHHHHHHHHHHHcCCC--CCcceeeeccccHHHHHHHHHcC-CccceEEEEec
Q psy1119 701 EQEWKMSLQKALQKAIDAGAV--QPLVRTIFPEDKVEEAFRYMAAG-KHIGKVIIKIR 755 (1392)
Q Consensus 701 ~~~~~~~~~~~~~~~l~~g~l--~pl~~~vf~l~ev~eA~~~l~~g-~~~GKvVI~~~ 755 (1392)
..+..+.+++++|++ +|+++++|+++++++||+.+.++ ...+|+||+.+
T Consensus 311 ------~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~ 362 (363)
T 3m6i_A 311 ------NTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSL 362 (363)
T ss_dssp ------SCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC
T ss_pred ------HHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecC
Confidence 112345577889988 55678999999999999999998 67899999875
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-36 Score=353.82 Aligned_cols=290 Identities=20% Similarity=0.249 Sum_probs=240.5
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhc-CCCChhhhhhhccccccccceeeEEEEe-------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTT-AKLAPEVIESRRLYQHCVIGFEYSGRLR------- 505 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~-G~~~~~~~~~~~~~~p~~lG~E~sGvV~------- 505 (1392)
..+++.+.|.|. ++++||+|||+|+|||++|++.+. |..+.. ....|.++|||++|+|+
T Consensus 14 ~~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~-----~~~~p~v~G~E~~G~V~~vG~~v~ 80 (352)
T 1e3j_A 14 NDLRLEQRPIPE--------PKEDEVLLQMAYVGICGSDVHYYEHGRIADF-----IVKDPMVIGHEASGTVVKVGKNVK 80 (352)
T ss_dssp TEEEEEECCCCC--------CCTTEEEEEEEEEEECHHHHHHHHHSBSSSC-----BCCSCEECCCEEEEEEEEECTTCC
T ss_pred CcEEEEEecCCC--------CCCCeEEEEEEEEEEChhhHHHHcCCCCccc-----cCCCCccccccceEEEEEeCCCCC
Confidence 368888888875 689999999999999999999887 433211 11247899999999997
Q ss_pred --eCCCeEEEee----------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHH
Q psy1119 506 --DSGKRVMGLT----------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVY 555 (1392)
Q Consensus 506 --~vGdrV~gl~----------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~ 555 (1392)
++||||++.. ..|+|+||+++|+..++++|+++|+++||++ .+++|||+
T Consensus 81 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~ 159 (352)
T 1e3j_A 81 HLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EPLSVGVH 159 (352)
T ss_dssp SCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HHHHHHHH
T ss_pred CCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh-chHHHHHH
Confidence 4789998741 3589999999999999999999999999976 58899999
Q ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCC-ccHHHHHHHHc
Q psy1119 556 AMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRD-TSFEQLVMKRT 634 (1392)
Q Consensus 556 aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~-~~~~~~i~~~T 634 (1392)
++ ..+++++|++|||+|+ |++|++++|+|+++|++|++++.+++|++++++ +++++++|+++ .++.+.+++.+
T Consensus 160 al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~i~~~~ 233 (352)
T 1e3j_A 160 AC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGADVTLVVDPAKEEESSIIERI 233 (352)
T ss_dssp HH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCSEEEECCTTTSCHHHHHHHH
T ss_pred HH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----hCCCEEEcCcccccHHHHHHHHh
Confidence 99 7889999999999986 999999999999999999999999999999986 68899999886 78888898888
Q ss_pred C---CCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCcccc-ccccCCCcEEEEEechhhhhhCHHHHHHHH
Q psy1119 635 K---GRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVMLDNFFFAEQEWKMSLQ 709 (1392)
Q Consensus 635 ~---g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~ 709 (1392)
+ ++|+|+|||++++. .++.++++++++|+++.+|.... ...++ ..++.+++++.|.... . . .+
T Consensus 234 ~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~--~~~~~~~~~~~~~~~i~g~~~~---~--~-----~~ 301 (352)
T 1e3j_A 234 RSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ--MVTVPLVNACAREIDIKSVFRY---C--N-----DY 301 (352)
T ss_dssp HHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS--CCCCCHHHHHTTTCEEEECCSC---S--S-----CH
T ss_pred ccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC--CccccHHHHHhcCcEEEEeccc---h--H-----HH
Confidence 6 78999999999865 68999999999999999996431 11122 2456788999886432 1 1 13
Q ss_pred HHHHHHHHcCCCC--CcceeeeccccHHHHHHHHHcCC-ccceEEEEec
Q psy1119 710 KALQKAIDAGAVQ--PLVRTIFPEDKVEEAFRYMAAGK-HIGKVIIKIR 755 (1392)
Q Consensus 710 ~~~~~~l~~g~l~--pl~~~vf~l~ev~eA~~~l~~g~-~~GKvVI~~~ 755 (1392)
..+.+++.+|+++ ++++++|+++++++||+.+.+++ ..||+||+++
T Consensus 302 ~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~ 350 (352)
T 1e3j_A 302 PIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCR 350 (352)
T ss_dssp HHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECC
T ss_pred HHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecC
Confidence 3455778889864 56789999999999999999998 6999999875
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-36 Score=354.91 Aligned_cols=292 Identities=19% Similarity=0.247 Sum_probs=240.6
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-------- 505 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-------- 505 (1392)
..+++.+.|.|. ++++||+|||.|+|||++|++++.|..... .....|.++|||++|+|+
T Consensus 17 ~~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~----~~~~~p~v~G~E~~G~V~~vG~~V~~ 84 (356)
T 1pl8_A 17 GDLRLENYPIPE--------PGPNEVLLRMHSVGICGSDVHYWEYGRIGN----FIVKKPMVLGHEASGTVEKVGSSVKH 84 (356)
T ss_dssp TEEEEEECCCCC--------CCTTEEEEEEEEEEECHHHHHHHHHSEETT----EECSSCEECCCEEEEEEEEECTTCCS
T ss_pred CcEEEEEccCCC--------CCCCeEEEEEEEeeeCHHHHHHHcCCCCCC----ccCCCCcccccceEEEEEEECCCCCC
Confidence 368889988875 689999999999999999999987432110 011247899999999997
Q ss_pred -eCCCeEEEe----------------------------ecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHH
Q psy1119 506 -DSGKRVMGL----------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYA 556 (1392)
Q Consensus 506 -~vGdrV~gl----------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~a 556 (1392)
++||||++. ...|+|+||+++|+..++++|+++|+++||++ .+++|||++
T Consensus 85 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~~~ta~~a 163 (356)
T 1pl8_A 85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EPLSVGIHA 163 (356)
T ss_dssp CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HHHHHHHHH
T ss_pred CCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhh-chHHHHHHH
Confidence 478999864 12589999999999999999999999999976 589999999
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCC---CccHHHHHHH
Q psy1119 557 MFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSR---DTSFEQLVMK 632 (1392)
Q Consensus 557 L~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~---~~~~~~~i~~ 632 (1392)
+ ..+++++|++|||+|+ |++|++++|+|+++|+ +|++++.+++|++++++ +++++++|++ +.++.+.+++
T Consensus 164 l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~~i~~ 237 (356)
T 1pl8_A 164 C-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGADLVLQISKESPQEIARKVEG 237 (356)
T ss_dssp H-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCSEEEECSSCCHHHHHHHHHH
T ss_pred H-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCCEEEcCcccccchHHHHHHH
Confidence 9 7889999999999975 9999999999999999 89999999999999986 6889999988 4678888999
Q ss_pred HcCCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCcccc-ccccCCCcEEEEEechhhhhhCHHHHHHHHH
Q psy1119 633 RTKGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVMLDNFFFAEQEWKMSLQK 710 (1392)
Q Consensus 633 ~T~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~ 710 (1392)
.|+ +|+|+|||+++++ .++.++++|+++|+++.+|.... ...++ ..++.+++++.|+... . . .+.
T Consensus 238 ~~~-~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~--~~~~~~~~~~~~~~~i~g~~~~---~--~-----~~~ 304 (356)
T 1pl8_A 238 QLG-CKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE--MTTVPLLHAAIREVDIKGVFRY---C--N-----TWP 304 (356)
T ss_dssp HHT-SCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS--CCCCCHHHHHHTTCEEEECCSC---S--S-----CHH
T ss_pred HhC-CCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCC--CCccCHHHHHhcceEEEEeccc---H--H-----HHH
Confidence 887 7999999999865 68999999999999999996421 11222 2355788999887532 1 1 133
Q ss_pred HHHHHHHcCCCC--CcceeeeccccHHHHHHHHHcCCccceEEEEecCCC
Q psy1119 711 ALQKAIDAGAVQ--PLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEE 758 (1392)
Q Consensus 711 ~~~~~l~~g~l~--pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~~~ 758 (1392)
.+.+++++|+++ ++++++|+++++++||+.+.++ ..||+||++++++
T Consensus 305 ~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~~~ 353 (356)
T 1pl8_A 305 VAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCDPSD 353 (356)
T ss_dssp HHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCTTC
T ss_pred HHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCCCCC
Confidence 455778889865 5678999999999999999998 8899999997654
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=352.53 Aligned_cols=301 Identities=14% Similarity=0.148 Sum_probs=254.0
Q ss_pred CCC--CCceEEeCCCCcccccccCCC-CCCeEEEEEEEEecChhhHHHhcC----CCChhhhhhhccccccccceeeEEE
Q psy1119 431 GDM--SSLTWEQGPVNMKTWKKYSKD-NINHDIAQIYYSSINFRDIMLTTA----KLAPEVIESRRLYQHCVIGFEYSGR 503 (1392)
Q Consensus 431 G~l--~~l~~~~~~~~~~~~~~~~~~-~~~evlV~V~a~gln~~Dv~~~~G----~~~~~~~~~~~~~~p~~lG~E~sGv 503 (1392)
|.+ +.+++.+.|.|. + +++||+|||.|+|||+.|++...| .++. ....|.++|||++|+
T Consensus 22 g~p~~~~l~~~~~~~P~--------~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~------~~~~p~v~G~E~~G~ 87 (357)
T 2zb4_A 22 GNPVAENFRMEEVYLPD--------NINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYIT------PWQLSQVVDGGGIGI 87 (357)
T ss_dssp SCCCGGGEEEEEEECCS--------CCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSC------CCCBTSBCEEEEEEE
T ss_pred CCCCcCceEEEeecCCC--------CCCCCeEEEEEEEEecCHHHHhhccccccccccC------CCCCCccccccEEEE
Confidence 666 789999988875 5 899999999999999999987765 2211 112477999999999
Q ss_pred Ee-------eCCCeEEEeecCCcccceEEecccceEEcCCCC-----CHhhHhhhhHHHHHHHHHHHHhcCCCCC--CEE
Q psy1119 504 LR-------DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQW-----TLEDAATVPCVYATAVYAMFICGQMQKG--ESI 569 (1392)
Q Consensus 504 V~-------~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~l-----s~e~AA~lp~~~~TA~~aL~~~a~l~~G--etV 569 (1392)
|+ ++||||++.. |+|+||++++++.++++|+++ +++ +|+++++++|||+++...+++++| ++|
T Consensus 88 V~~~~v~~~~vGdrV~~~~--G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~v 164 (357)
T 2zb4_A 88 IEESKHTNLTKGDFVTSFY--WPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTM 164 (357)
T ss_dssp EEEECSTTCCTTCEEEEEE--EESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEE
T ss_pred EEecCCCCCCCCCEEEecC--CCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEE
Confidence 96 5899999864 789999999999999999999 666 788999999999999889999999 999
Q ss_pred EEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCch
Q psy1119 570 LIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE 648 (1392)
Q Consensus 570 LI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~ 648 (1392)
||+||+|++|++++|+|+..|+ +|+++++++++++.+++. +++++++|.++.++.+.+++.+++ |+|+|||+.++
T Consensus 165 lI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~~~~d~~~~~~~~~~~~~~~~-~~d~vi~~~G~ 240 (357)
T 2zb4_A 165 VVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFDAAINYKKDNVAEQLRESCPA-GVDVYFDNVGG 240 (357)
T ss_dssp EESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCSEEEETTTSCHHHHHHHHCTT-CEEEEEESCCH
T ss_pred EEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCceEEecCchHHHHHHHHhcCC-CCCEEEECCCH
Confidence 9999999999999999999999 999999999999998763 577899999988999999999987 99999999999
Q ss_pred hHHHHHHhcccCCeEEEEEcccccccCcccc----------ccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHc
Q psy1119 649 EKLQASVRCLAQGGRFLEIGKFDLANNNMLG----------MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDA 718 (1392)
Q Consensus 649 ~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~----------~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 718 (1392)
+.++.++++++++||++.+|...... ..++ ..++.+++++.|+....+. ......+..+.+++.+
T Consensus 241 ~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~----~~~~~~~~~~~~l~~~ 315 (357)
T 2zb4_A 241 NISDTVISQMNENSHIILCGQISQYN-KDVPYPPPLSPAIEAIQKERNITRERFLVLNYK----DKFEPGILQLSQWFKE 315 (357)
T ss_dssp HHHHHHHHTEEEEEEEEECCCGGGTT-SCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGG----GGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCcEEEEECCccccc-cCccccccchhhhhhhhhcceeEEEEeehhhhh----HHHHHHHHHHHHHHHc
Confidence 89999999999999999999754321 1111 2345688999997654321 1223445667788999
Q ss_pred CCCCCcceeeeccccHHHHHHHHHcCCccceEEEEecCC
Q psy1119 719 GAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDE 757 (1392)
Q Consensus 719 g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~~ 757 (1392)
|++++.+..+|+++++++||+.+.+++..||+||+++++
T Consensus 316 g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~ 354 (357)
T 2zb4_A 316 GKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354 (357)
T ss_dssp TCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECCCC
T ss_pred CCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEEecc
Confidence 999998888899999999999999999899999998653
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-36 Score=358.66 Aligned_cols=308 Identities=20% Similarity=0.266 Sum_probs=245.0
Q ss_pred eEeeccCCCCCCceE-EeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhh--------hhhcccccc
Q psy1119 424 YINALVRGDMSSLTW-EQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVI--------ESRRLYQHC 494 (1392)
Q Consensus 424 ~l~~~~~G~l~~l~~-~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~--------~~~~~~~p~ 494 (1392)
.+....+|.+..+++ .+.|.|.. ++++||+|||.|+|||+.|++++.|..+.... .......|.
T Consensus 24 a~~~~~~g~~~~l~~~~~~p~P~~-------~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~ 96 (375)
T 2vn8_A 24 AWVIDKYGKNEVLRFTQNMMMPII-------HYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPL 96 (375)
T ss_dssp EEEBSSCCSGGGCEEEEEECCCCC-------CSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSB
T ss_pred eEEeccCCCccceEEeccccCCCC-------CCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCc
Confidence 455667787888999 88887751 38999999999999999999999986431100 000112578
Q ss_pred ccceeeEEEEe---------eCCCeEEEeec---CCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcC
Q psy1119 495 VIGFEYSGRLR---------DSGKRVMGLTS---GRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQ 562 (1392)
Q Consensus 495 ~lG~E~sGvV~---------~vGdrV~gl~~---~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~ 562 (1392)
++|||++|+|+ ++||||++... .|+|+||++++++.++++|+++|+++||+++++++|||+++...++
T Consensus 97 v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~ 176 (375)
T 2vn8_A 97 TLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGG 176 (375)
T ss_dssp CCCCEEEEEEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTC
T ss_pred ccceeeeEEEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcc
Confidence 99999999997 46899998753 5899999999999999999999999999999999999999987888
Q ss_pred ----CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCc
Q psy1119 563 ----MQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRG 638 (1392)
Q Consensus 563 ----l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~G 638 (1392)
+++|++|||+||+|+||++++|+|+..|++|++++ ++++++++++ +|+++++|+++.++.+.+++. .|
T Consensus 177 ~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~----lGa~~v~~~~~~~~~~~~~~~---~g 248 (375)
T 2vn8_A 177 LNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRK----LGADDVIDYKSGSVEEQLKSL---KP 248 (375)
T ss_dssp CCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH----TTCSEEEETTSSCHHHHHHTS---CC
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHH----cCCCEEEECCchHHHHHHhhc---CC
Confidence 99999999999999999999999999999999988 6788888865 789999999988888877653 58
Q ss_pred ceEEEecCchh--HHHHHHhcccCCeEEEEEcccccccCcc--cc-------ccccC-------CCcEEEEEechhhhhh
Q psy1119 639 VDLVLNSLAEE--KLQASVRCLAQGGRFLEIGKFDLANNNM--LG-------MEVFM-------RETSFHGVMLDNFFFA 700 (1392)
Q Consensus 639 vDvVlds~~~~--~l~~s~~~La~~Gr~v~iG~~~~~~~~~--l~-------~~~~~-------k~~s~~g~~~~~~~~~ 700 (1392)
+|+|||+++++ .+..++++++++|+++.+|......... +. ..++. ++..+.+... ..
T Consensus 249 ~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~ 324 (375)
T 2vn8_A 249 FDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFF----MA 324 (375)
T ss_dssp BSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCC----CC
T ss_pred CCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEEe----CC
Confidence 99999999876 3488999999999999999643211000 00 01111 3444433211 11
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 701 EQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 701 ~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
. .+.++.+.+++++|+++|+++++|+++++++||+.+.+++..||+||++
T Consensus 325 ~----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 374 (375)
T 2vn8_A 325 S----GPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV 374 (375)
T ss_dssp C----HHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred C----HHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence 1 1234556678899999999999999999999999999999999999875
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=352.89 Aligned_cols=295 Identities=18% Similarity=0.265 Sum_probs=246.1
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhh-hhhccccccccceeeEEEEe--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVI-ESRRLYQHCVIGFEYSGRLR-------- 505 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~-~~~~~~~p~~lG~E~sGvV~-------- 505 (1392)
.+++.+.|.|. ++++||+|||.|+|||+.|++++.|.++.... .......|.++|||++|+|+
T Consensus 12 ~l~~~~~~~p~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~ 83 (347)
T 1jvb_A 12 PLSLQEIGVPK--------PKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVG 83 (347)
T ss_dssp CCEEEECCCCC--------CCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTTCCS
T ss_pred CeEEEEeeCCC--------CCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCCCCC
Confidence 37888988875 68999999999999999999999886542000 00011347899999999997
Q ss_pred -eCCCeEEEee---------------------------cCCcccceEEecc-cceEEcCCCCCHhhHhhhhHHHHHHHHH
Q psy1119 506 -DSGKRVMGLT---------------------------SGRSLANCCETDV-EMAWEIPDQWTLEDAATVPCVYATAVYA 556 (1392)
Q Consensus 506 -~vGdrV~gl~---------------------------~~g~~a~~v~~~~-~~~~~iPd~ls~e~AA~lp~~~~TA~~a 556 (1392)
++||||++.. ..|+|+||+++|+ ..++++ +++|+++||+++++++|||++
T Consensus 84 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~ta~~~ 162 (347)
T 1jvb_A 84 YSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGITTYRA 162 (347)
T ss_dssp CCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHHHHHHH
T ss_pred CCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHHHcccchhhHHHHHHH
Confidence 4789997642 3589999999999 999999 999999999999999999999
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcC
Q psy1119 557 MFICGQMQKGESILIHAGSGGVGQAAINLARYM-DAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTK 635 (1392)
Q Consensus 557 L~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~-Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~ 635 (1392)
+. .+++++|++|||+||+|++|++++|+|+.. |++|++++.++++++++++ +++++++|.++.++.+.+.+.+.
T Consensus 163 l~-~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~ 237 (347)
T 1jvb_A 163 VR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----AGADYVINASMQDPLAEIRRITE 237 (347)
T ss_dssp HH-HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHTT
T ss_pred HH-hcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCCEEecCCCccHHHHHHHHhc
Confidence 95 589999999999999889999999999999 9999999999999999876 57889999998888888988887
Q ss_pred CCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhhhhhCHHHHHHHHHHHH
Q psy1119 636 GRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQ 713 (1392)
Q Consensus 636 g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~ 713 (1392)
+.++|+|||+.++. .++.++++++++|+++.+|...... .+++ .++.+++++.|+.... . ..+..+.
T Consensus 238 ~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~i~g~~~~~-----~----~~~~~~~ 306 (347)
T 1jvb_A 238 SKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL--HYHAPLITLSEIQFVGSLVGN-----Q----SDFLGIM 306 (347)
T ss_dssp TSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC--CCCHHHHHHHTCEEEECCSCC-----H----HHHHHHH
T ss_pred CCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC--CCCHHHHHhCceEEEEEeccC-----H----HHHHHHH
Confidence 33899999999876 8899999999999999999754111 2222 3456889999875432 1 2234566
Q ss_pred HHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 714 KAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 714 ~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+++++|+++|+++++|+++++++||+.+.+++..||+||++
T Consensus 307 ~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 347 (347)
T 1jvb_A 307 RLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347 (347)
T ss_dssp HHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred HHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence 78899999999999999999999999999999999999864
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-36 Score=354.20 Aligned_cols=291 Identities=15% Similarity=0.192 Sum_probs=240.2
Q ss_pred CCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe----
Q psy1119 430 RGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR---- 505 (1392)
Q Consensus 430 ~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~---- 505 (1392)
.|..+.+++.+.|.|. ++++||+|||.|+|||+.|++.+.|.++.. ..|.++|||++|+|+
T Consensus 16 ~~~~~~l~~~~~~~p~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-------~~P~v~GhE~~G~V~~vG~ 80 (357)
T 2cf5_A 16 RDPSGILSPYTYTLRE--------TGPEDVNIRIICCGICHTDLHQTKNDLGMS-------NYPMVPGHEVVGEVVEVGS 80 (357)
T ss_dssp CSTTCCEEEEEEECCC--------CCTTEEEEEEEEEEECHHHHHHHTCTTTCC-------CSSBCCCCEEEEEEEEECS
T ss_pred ccCCCCcEEEEecCCC--------CCCCEEEEEEEEEeecchhhhhhcCCCCCC-------CCCeecCcceeEEEEEECC
Confidence 4556778888888775 689999999999999999999999875421 237899999999997
Q ss_pred -----eCCCeEEEe-----------------------------------ecCCcccceEEecccceEEcCCCCCHhhHhh
Q psy1119 506 -----DSGKRVMGL-----------------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAAT 545 (1392)
Q Consensus 506 -----~vGdrV~gl-----------------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~ 545 (1392)
++||||+.. ...|+|+||+++|+..++++|+++|+++||+
T Consensus 81 ~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~ 160 (357)
T 2cf5_A 81 DVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAP 160 (357)
T ss_dssp SCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTG
T ss_pred CCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhh
Confidence 378999741 1358999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhcCCC-CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCc
Q psy1119 546 VPCVYATAVYAMFICGQMQ-KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDT 624 (1392)
Q Consensus 546 lp~~~~TA~~aL~~~a~l~-~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~ 624 (1392)
++++++|||+++. .++++ +|++|||+| +|+||++++|+|+++|++|++++++++|++++++ .+|+++++|+++.
T Consensus 161 l~~~~~ta~~~l~-~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~lGa~~vi~~~~~ 235 (357)
T 2cf5_A 161 LLCAGVTVYSPLS-HFGLKQPGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DLGADDYVIGSDQ 235 (357)
T ss_dssp GGTHHHHHHHHHH-HTSTTSTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TSCCSCEEETTCH
T ss_pred hhhhHHHHHHHHH-hcCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---HcCCceeeccccH
Confidence 9999999999995 46788 999999997 5999999999999999999999999999999884 3788999998764
Q ss_pred cHHHHHHHHcCCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhCHH
Q psy1119 625 SFEQLVMKRTKGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQE 703 (1392)
Q Consensus 625 ~~~~~i~~~T~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~~~ 703 (1392)
+.+++.++ |+|+|||++++. .++.++++++++|+++.+|...... ..++..++.+++++.|+.... .+
T Consensus 236 ---~~~~~~~~--g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~~~~~i~g~~~~~-----~~ 304 (357)
T 2cf5_A 236 ---AKMSELAD--SLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPL-QFLTPLLMLGRKVITGSFIGS-----MK 304 (357)
T ss_dssp ---HHHHHSTT--TEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCC-CCCHHHHHHHTCEEEECCSCC-----HH
T ss_pred ---HHHHHhcC--CCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCc-cccCHHHHhCccEEEEEccCC-----HH
Confidence 35555553 899999999864 7899999999999999999754221 112212667899999875432 11
Q ss_pred HHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEecC
Q psy1119 704 WKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRD 756 (1392)
Q Consensus 704 ~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~ 756 (1392)
....+.+++.+|++++.+ ++||++++++||+.+.+++..||+||++++
T Consensus 305 ----~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 352 (357)
T 2cf5_A 305 ----ETEEMLEFCKEKGLSSII-EVVKMDYVNTAFERLEKNDVRYRFVVDVEG 352 (357)
T ss_dssp ----HHHHHHHHHHHTTCCCCE-EEEEGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred ----HHHHHHHHHHcCCCCCce-EEEeHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence 233455678889998865 799999999999999999999999999854
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=362.78 Aligned_cols=305 Identities=15% Similarity=0.140 Sum_probs=252.7
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChh---------------hhh-------hhccc
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPE---------------VIE-------SRRLY 491 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~---------------~~~-------~~~~~ 491 (1392)
..+++.+.|.|. ++++||+|||.|+|||+.|++++.|.++.. ..+ .....
T Consensus 18 ~~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~~~~~~ 89 (379)
T 3iup_A 18 LELSLDSIDTPH--------PGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSMAGRLD 89 (379)
T ss_dssp EEEEEEEEECCC--------CCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHHGGGTT
T ss_pred CceEEEeccCCC--------CCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccccccccccC
Confidence 368888888876 689999999999999999999999864210 000 00123
Q ss_pred cccccceeeEEEEee----------CCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhc
Q psy1119 492 QHCVIGFEYSGRLRD----------SGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICG 561 (1392)
Q Consensus 492 ~p~~lG~E~sGvV~~----------vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a 561 (1392)
.|.++|||++|+|++ +||||++.. .|+|+||+++|++.++++|+++|+++||++++.++|||+++.. +
T Consensus 90 ~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~-~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~-~ 167 (379)
T 3iup_A 90 ASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG-GAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVET-M 167 (379)
T ss_dssp EEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC-SCCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHHHH-H
T ss_pred CCccceeeeEEEEEEeCCCcccCCCCCCEEEecC-CCcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHH-h
Confidence 578999999999873 688998865 5899999999999999999999999999999999999987754 4
Q ss_pred CCCCCCEEEEEc-CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcce
Q psy1119 562 QMQKGESILIHA-GSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVD 640 (1392)
Q Consensus 562 ~l~~GetVLI~g-a~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvD 640 (1392)
+ ++|++|||+| |+|++|++++|+|+++|++|++++++++|++++++ +|+++++|+++.++.+.+++.|+++|+|
T Consensus 168 ~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~v~~~t~~~g~d 242 (379)
T 3iup_A 168 R-LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA----QGAVHVCNAASPTFMQDLTEALVSTGAT 242 (379)
T ss_dssp H-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH----TTCSCEEETTSTTHHHHHHHHHHHHCCC
T ss_pred c-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh----CCCcEEEeCCChHHHHHHHHHhcCCCce
Confidence 4 8999999997 89999999999999999999999999999999987 7899999999999999999999999999
Q ss_pred EEEecCchh-HHHHHHhccc-----CC-----------eEEEEEcccccccCccccccccCCCcEEEEEechhhhh-hCH
Q psy1119 641 LVLNSLAEE-KLQASVRCLA-----QG-----------GRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFF-AEQ 702 (1392)
Q Consensus 641 vVlds~~~~-~l~~s~~~La-----~~-----------Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~-~~~ 702 (1392)
+|||+++++ ..+.++++++ ++ |+++.+|..+.... . ....+.+++++.|+.+..+.. ..+
T Consensus 243 ~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~~~-~-~~~~~~~~~~i~g~~~~~~~~~~~~ 320 (379)
T 3iup_A 243 IAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPT-E-FNRNFGMAWGMGGWLLFPFLQKIGR 320 (379)
T ss_dssp EEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEEEE-E-ECCCSCSCEEEEECCHHHHHHHHCH
T ss_pred EEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCCcc-c-cccccccceEEEEEEeeeecccCCH
Confidence 999999874 6688888886 33 67777665432211 1 124567899999988766532 345
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcceeeeccccH--HHHHHHHHcCCccceEEEEecC
Q psy1119 703 EWKMSLQKALQKAIDAGAVQPLVRTIFPEDKV--EEAFRYMAAGKHIGKVIIKIRD 756 (1392)
Q Consensus 703 ~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev--~eA~~~l~~g~~~GKvVI~~~~ 756 (1392)
+...+..+.+.+++.+ .++++++++|+++++ ++||+.+.++++.||+||+++.
T Consensus 321 ~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~~~ 375 (379)
T 3iup_A 321 ERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLINPNK 375 (379)
T ss_dssp HHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEETTT
T ss_pred HHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcCCCCceEEEeCCC
Confidence 5666677777777777 589999999999999 9999999999999999999864
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-36 Score=358.47 Aligned_cols=292 Identities=17% Similarity=0.152 Sum_probs=241.3
Q ss_pred eeccCCCCCCceEEe--CCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEE
Q psy1119 426 NALVRGDMSSLTWEQ--GPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGR 503 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~--~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGv 503 (1392)
....+|. .+++.+ .|.|. ++++||+|||.|+|||+.|++.+.|.++.. ..|.++|||++|+
T Consensus 11 ~~~~~~~--~l~~~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-------~~p~v~GhE~~G~ 73 (360)
T 1piw_A 11 AIQSHED--WKNPKKTKYDPKP--------FYDHDIDIKIEACGVCGSDIHCAAGHWGNM-------KMPLVVGHEIVGK 73 (360)
T ss_dssp EECCSSS--TTSCEEEEECCCC--------CCTTEEEEEEEEEEECHHHHHHHTTTTSCC-------CSSEECCCCEEEE
T ss_pred EEecCCC--CeeEEeccccCCC--------CCCCeEEEEEEEeccchhhHHHhcCCCCCC-------CCCcccCcCceEE
Confidence 3444553 366777 77765 689999999999999999999999876431 2378999999999
Q ss_pred Eee----------CCCeEEE-----------------------------------eecCCcccceEEecccceEEcCCCC
Q psy1119 504 LRD----------SGKRVMG-----------------------------------LTSGRSLANCCETDVEMAWEIPDQW 538 (1392)
Q Consensus 504 V~~----------vGdrV~g-----------------------------------l~~~g~~a~~v~~~~~~~~~iPd~l 538 (1392)
|++ +||||+. ....|+|+||+++|+..++++|+++
T Consensus 74 V~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~ 153 (360)
T 1piw_A 74 VVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENI 153 (360)
T ss_dssp EEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTS
T ss_pred EEEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCC
Confidence 863 6789832 1235899999999999999999999
Q ss_pred CHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCce
Q psy1119 539 TLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENI 618 (1392)
Q Consensus 539 s~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i 618 (1392)
|+++||+++++++|||+++.. +++++|++|||+|+ |++|++++|+|+++|++|++++++++|++++++ ++++++
T Consensus 154 ~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~----lGa~~v 227 (360)
T 1piw_A 154 PSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK----MGADHY 227 (360)
T ss_dssp CHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTCSEE
T ss_pred CHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----cCCCEE
Confidence 999999999999999999965 89999999999988 999999999999999999999999999999987 678999
Q ss_pred eeCCCc-cHHHHHHHHcCCCcceEEEecCch---hHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEec
Q psy1119 619 GNSRDT-SFEQLVMKRTKGRGVDLVLNSLAE---EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVML 694 (1392)
Q Consensus 619 ~~s~~~-~~~~~i~~~T~g~GvDvVlds~~~---~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~ 694 (1392)
+|+++. ++.+.++ .|+|+|||++++ +.++.++++++++|+++.+|.... ........++.+++++.|+..
T Consensus 228 ~~~~~~~~~~~~~~-----~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~ 301 (360)
T 1piw_A 228 IATLEEGDWGEKYF-----DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSAL 301 (360)
T ss_dssp EEGGGTSCHHHHSC-----SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCC
T ss_pred EcCcCchHHHHHhh-----cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEec
Confidence 998877 7665543 489999999987 678899999999999999997543 101112245678999998754
Q ss_pred hhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeecccc--HHHHHHHHHcCCccceEEEEecC
Q psy1119 695 DNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDK--VEEAFRYMAAGKHIGKVIIKIRD 756 (1392)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~e--v~eA~~~l~~g~~~GKvVI~~~~ 756 (1392)
.. . ..+..+.+++.+|++++.+ ++|++++ +++||+.+.+++..||+||++++
T Consensus 302 ~~-----~----~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~ 355 (360)
T 1piw_A 302 GS-----I----KELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGYD 355 (360)
T ss_dssp CC-----H----HHHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEEEECCH
T ss_pred CC-----H----HHHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEEEecCc
Confidence 32 2 2234455778889999987 9999999 99999999999999999999864
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-36 Score=357.28 Aligned_cols=286 Identities=19% Similarity=0.219 Sum_probs=236.6
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-------- 505 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-------- 505 (1392)
+.|++.+.|.|. ++++||+|||.|+|||+.|++++.|.++.. ..|.++|||++|+|+
T Consensus 33 ~~l~~~~~p~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-------~~P~v~GhE~~G~V~~vG~~V~~ 97 (369)
T 1uuf_A 33 QPLEPMDITRRE--------PGPNDVKIEIAYCGVCHSDLHQVRSEWAGT-------VYPCVPGHEIVGRVVAVGDQVEK 97 (369)
T ss_dssp SCCEEEECCCCC--------CCTTEEEEEEEEEECCHHHHHHHHCTTSCC-------CSSBCCCCCEEEEEEEECTTCCS
T ss_pred CCcEEEEecCCC--------CCCCeEEEEEEEEeecHHHHHHhcCCCCCC-------CCCeecccCceEEEEEECCCCCC
Confidence 578899998876 689999999999999999999999875421 237899999999997
Q ss_pred -eCCCeEEEe------------------------------------ecCCcccceEEecccceEEcCCC-CCHhhHhhhh
Q psy1119 506 -DSGKRVMGL------------------------------------TSGRSLANCCETDVEMAWEIPDQ-WTLEDAATVP 547 (1392)
Q Consensus 506 -~vGdrV~gl------------------------------------~~~g~~a~~v~~~~~~~~~iPd~-ls~e~AA~lp 547 (1392)
++||||++. ...|+|+||+.+|+..++++|++ +|+++||+++
T Consensus 98 ~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~ 177 (369)
T 1uuf_A 98 YAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLL 177 (369)
T ss_dssp CCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGG
T ss_pred CCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhhh
Confidence 478999752 23489999999999999999999 9999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHH
Q psy1119 548 CVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFE 627 (1392)
Q Consensus 548 ~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~ 627 (1392)
++++|||+++.. +++++|++|||+|+ |++|++++|+|+.+|++|++++.++++++++++ +|+++++|+++.++.
T Consensus 178 ~~~~tA~~al~~-~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~ 251 (369)
T 1uuf_A 178 CAGITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----LGADEVVNSRNADEM 251 (369)
T ss_dssp THHHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTCSEEEETTCHHHH
T ss_pred hhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCcEEeccccHHHH
Confidence 999999999965 58999999999976 999999999999999999999999999999986 678999998876654
Q ss_pred HHHHHHcCCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCcccc-ccccCCCcEEEEEechhhhhhCHHHH
Q psy1119 628 QLVMKRTKGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVMLDNFFFAEQEWK 705 (1392)
Q Consensus 628 ~~i~~~T~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~ 705 (1392)
+.+ + +|+|+|||++++. .++.++++++++|+++.+|...... ..++ ..++.+++++.|+.... .+
T Consensus 252 ~~~---~--~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~~~~~~i~g~~~~~-----~~-- 318 (369)
T 1uuf_A 252 AAH---L--KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPH-KSPEVFNLIMKRRAIAGSMIGG-----IP-- 318 (369)
T ss_dssp HTT---T--TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC--------CHHHHHTTTCEEEECCSCC-----HH--
T ss_pred HHh---h--cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCc-cccCHHHHHhCCcEEEEeecCC-----HH--
Confidence 333 3 4899999999875 6899999999999999999754221 0122 24567899999975432 21
Q ss_pred HHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEecC
Q psy1119 706 MSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRD 756 (1392)
Q Consensus 706 ~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~ 756 (1392)
.+..+.+++++|+++|.+ ++|+++++++||+.+.+++..||+||.+++
T Consensus 319 --~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 366 (369)
T 1uuf_A 319 --ETQEMLDFCAEHGIVADI-EMIRADQINEAYERMLRGDVKYRFVIDNRT 366 (369)
T ss_dssp --HHHHHHHHHHHHTCCCCE-EEECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred --HHHHHHHHHHhCCCCcce-EEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 233455678888999875 579999999999999999989999998854
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-36 Score=355.72 Aligned_cols=285 Identities=15% Similarity=0.237 Sum_probs=219.1
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~-------- 506 (1392)
.+++.+.|.|. ++++||+|||.|+|||+.|++.+.|.++.. ....|.++|||++|+|++
T Consensus 15 ~l~~~~~~~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-----~~~~p~i~G~E~~G~V~~vG~~~~~~ 81 (344)
T 2h6e_A 15 PLSIEDVNIPE--------PQGEEVLIRIGGAGVCRTDLRVWKGVEAKQ-----GFRLPIILGHENAGTIVEVGELAKVK 81 (344)
T ss_dssp -----EEEECC--------CCTTCEEEEEEEEECCHHHHHHHTTSCCCT-----TCCSSEECCCCEEEEEEEECTTCCCC
T ss_pred CCeEEEeeCCC--------CCCCEEEEEEEEEEechhhHHHHcCCCccc-----CCCCCccccccceEEEEEECCCCCCC
Confidence 47777877765 689999999999999999999999976520 012478999999999974
Q ss_pred CCCeEEEee---------------------------cCCcccceEEec-ccceEEcCCCCCHhhHhhhhHHHHHHHHHHH
Q psy1119 507 SGKRVMGLT---------------------------SGRSLANCCETD-VEMAWEIPDQWTLEDAATVPCVYATAVYAMF 558 (1392)
Q Consensus 507 vGdrV~gl~---------------------------~~g~~a~~v~~~-~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~ 558 (1392)
+||||++.. ..|+|+||+++| +..++++ +++|+++||+++++++|||+++.
T Consensus 82 ~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~al~ 160 (344)
T 2h6e_A 82 KGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMGAIR 160 (344)
T ss_dssp TTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHHHHH
Confidence 689998753 358999999999 9999999 99999999999999999999997
Q ss_pred Hh----cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHHCCCCCcCceeeCCC-ccHHHHHH
Q psy1119 559 IC----GQMQKGESILIHAGSGGVGQAAINLARYM--DAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRD-TSFEQLVM 631 (1392)
Q Consensus 559 ~~----a~l~~GetVLI~ga~GgVG~aaIqlA~~~--Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~-~~~~~~i~ 631 (1392)
.. +++ +|++|||+|| |++|++++|+|+++ |++|++++++++|++++++ +++++++|+++ .++ +.
T Consensus 161 ~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~---~~ 231 (344)
T 2h6e_A 161 QALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGADYVSEMKDAESL---IN 231 (344)
T ss_dssp HHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCSEEECHHHHHHH---HH
T ss_pred hhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCCEEeccccchHH---HH
Confidence 65 388 9999999988 99999999999999 9999999999999999986 67899998765 443 45
Q ss_pred HHcCCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCccccc-cccCCCcEEEEEechhhhhhCHHHHHHHH
Q psy1119 632 KRTKGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNFFFAEQEWKMSLQ 709 (1392)
Q Consensus 632 ~~T~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~~~k~~s~~g~~~~~~~~~~~~~~~~~~ 709 (1392)
+.++++|+|+|||+++++ .++.++++++++|+++.+|..... ..++. .++.+++++.|+.... . ..+
T Consensus 232 ~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~-----~----~~~ 300 (344)
T 2h6e_A 232 KLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKR--VSLEAFDTAVWNKKLLGSNYGS-----L----NDL 300 (344)
T ss_dssp HHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSC--CCCCHHHHHHTTCEEEECCSCC-----H----HHH
T ss_pred HhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCC--cccCHHHHhhCCcEEEEEecCC-----H----HHH
Confidence 566677999999999876 899999999999999999975321 12222 3457899999875432 2 223
Q ss_pred HHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEe
Q psy1119 710 KALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 710 ~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~ 754 (1392)
..+.+++.+|+++|.+ ++|+++++++||+.+.+++..||+||++
T Consensus 301 ~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 344 (344)
T 2h6e_A 301 EDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP 344 (344)
T ss_dssp HHHHHHHHTTSSCCCE-EEECC----------------CEEEECC
T ss_pred HHHHHHHHcCCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence 4556788999999988 9999999999999999999899999863
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-35 Score=348.66 Aligned_cols=293 Identities=14% Similarity=0.177 Sum_probs=241.5
Q ss_pred ccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--
Q psy1119 428 LVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-- 505 (1392)
Q Consensus 428 ~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-- 505 (1392)
..++....+++.+.|.|. ++++||+|||.|+|||+.|++.+.|.++.. ..|.++|||++|+|+
T Consensus 21 ~~~~~~~~l~~~~~~~p~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-------~~P~v~GhE~~G~V~~v 85 (366)
T 1yqd_A 21 AARDQSGHLSPFNFSRRA--------TGEEDVRFKVLYCGVCHSDLHSIKNDWGFS-------MYPLVPGHEIVGEVTEV 85 (366)
T ss_dssp EECSTTCCEEEEEEEECC--------CCTTEEEEEEEEEEECHHHHHHHHTSSSCC-------CSSBCCCCCEEEEEEEE
T ss_pred EEcCCCCCcEEEEccCCC--------CCCCeEEEEEEEEeechhhHHHHcCCCCCC-------CCCEecccceEEEEEEE
Confidence 345666778888888775 689999999999999999999999875421 237899999999997
Q ss_pred -------eCCCeEEEe-----------------------------------ecCCcccceEEecccceEEcCCCCCHhhH
Q psy1119 506 -------DSGKRVMGL-----------------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDA 543 (1392)
Q Consensus 506 -------~vGdrV~gl-----------------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~A 543 (1392)
++||||+.. ...|+|+||+++|+..++++|+++|+++|
T Consensus 86 G~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~a 165 (366)
T 1yqd_A 86 GSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGG 165 (366)
T ss_dssp CTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTT
T ss_pred CCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHh
Confidence 478999741 13589999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhcCCC-CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCC
Q psy1119 544 ATVPCVYATAVYAMFICGQMQ-KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSR 622 (1392)
Q Consensus 544 A~lp~~~~TA~~aL~~~a~l~-~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~ 622 (1392)
|+++++++|||+++.. ++++ +|++|||+|+ |+||++++|+|+.+|++|+++++++++++.+++ .+++++++|++
T Consensus 166 a~l~~~~~ta~~al~~-~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~lGa~~v~~~~ 240 (366)
T 1yqd_A 166 APLLCAGITVYSPLKY-FGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK---NFGADSFLVSR 240 (366)
T ss_dssp GGGGTHHHHHHHHHHH-TTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH---TSCCSEEEETT
T ss_pred hhhhhhHHHHHHHHHh-cCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcCCceEEecc
Confidence 9999999999999965 5788 9999999975 999999999999999999999999999998875 36889999987
Q ss_pred CccHHHHHHHHcCCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhhC
Q psy1119 623 DTSFEQLVMKRTKGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAE 701 (1392)
Q Consensus 623 ~~~~~~~i~~~T~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~~ 701 (1392)
+. +.+.+.++ |+|+|||++++. .++.++++++++|+++.+|..... .......++.+++++.|+....
T Consensus 241 ~~---~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~----- 309 (366)
T 1yqd_A 241 DQ---EQMQAAAG--TLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKP-LELPAFSLIAGRKIVAGSGIGG----- 309 (366)
T ss_dssp CH---HHHHHTTT--CEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSC-EEECHHHHHTTTCEEEECCSCC-----
T ss_pred CH---HHHHHhhC--CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCC-CCcCHHHHHhCCcEEEEecCCC-----
Confidence 64 34556663 899999999865 688999999999999999975421 1112234567899999875432
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcceeeeccccHHHHHHHHHcCCccceEEEEecC
Q psy1119 702 QEWKMSLQKALQKAIDAGAVQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRD 756 (1392)
Q Consensus 702 ~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~ 756 (1392)
.. ....+.+++.+|++++.+ ++|+++++++||+.+.+++..||+||.+++
T Consensus 310 ~~----~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~~ 359 (366)
T 1yqd_A 310 MK----ETQEMIDFAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDVGN 359 (366)
T ss_dssp HH----HHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECHHH
T ss_pred HH----HHHHHHHHHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEccc
Confidence 11 233455678889999876 799999999999999999999999999864
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=357.83 Aligned_cols=298 Identities=15% Similarity=0.223 Sum_probs=240.5
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~-------- 506 (1392)
.|++.+.|.|.. ++++||+|||.|+|||+.|++++.|..............|.++|||++|+|++
T Consensus 41 ~l~~~~~~~P~~-------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~ 113 (404)
T 3ip1_A 41 EVRVEEVPEPRI-------EKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINR 113 (404)
T ss_dssp EEEEEEECCCCC-------CSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECTTCEET
T ss_pred ceEEEEcCCCCC-------CCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECCCcccc
Confidence 588888888752 58899999999999999999999875321100001123578999999999864
Q ss_pred -------CCCeEEEe---------------------------ecCCcccceEEecccceEEcCCCCC------HhhHhhh
Q psy1119 507 -------SGKRVMGL---------------------------TSGRSLANCCETDVEMAWEIPDQWT------LEDAATV 546 (1392)
Q Consensus 507 -------vGdrV~gl---------------------------~~~g~~a~~v~~~~~~~~~iPd~ls------~e~AA~l 546 (1392)
+||||++. ...|+|+||+.+++..++++|++++ +.++|++
T Consensus 114 ~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l 193 (404)
T 3ip1_A 114 RTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSL 193 (404)
T ss_dssp TTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEECGGGBTTBCTHHHHHHHHT
T ss_pred ccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCcceEEechHHeEeccccccccccccchhHHhh
Confidence 57788763 2468999999999999999999886 5669999
Q ss_pred hHHHHHHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCc
Q psy1119 547 PCVYATAVYAMFIC-GQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDT 624 (1392)
Q Consensus 547 p~~~~TA~~aL~~~-a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~ 624 (1392)
+.+++|||+++... +++++|++|||+|+ |+||++++|+|+++|+ +|++++.+++|++++++ +|+++++|+++.
T Consensus 194 ~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~ 268 (404)
T 3ip1_A 194 VEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE----LGADHVIDPTKE 268 (404)
T ss_dssp HHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCSEEECTTTS
T ss_pred hhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCCEEEcCCCC
Confidence 99999999999755 48999999999987 9999999999999999 89999999999999987 689999999999
Q ss_pred cHHHHHHHHcCCCcceEEEecCchh--HHHHHHhcc----cCCeEEEEEcccccccCcccc-ccccCCCcEEEEEechhh
Q psy1119 625 SFEQLVMKRTKGRGVDLVLNSLAEE--KLQASVRCL----AQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVMLDNF 697 (1392)
Q Consensus 625 ~~~~~i~~~T~g~GvDvVlds~~~~--~l~~s~~~L----a~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~~~~ 697 (1392)
++.+.+++.|+|+|+|+|||+++++ .+..++++| +++|+++.+|...... .+. ..++.+++++.|.....
T Consensus 269 ~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~--~~~~~~~~~~~~~i~g~~~~~- 345 (404)
T 3ip1_A 269 NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKI--PLTGEVFQVRRAQIVGSQGHS- 345 (404)
T ss_dssp CHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCE--EECHHHHHHTTCEEEECCCCC-
T ss_pred CHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCC--cccHHHHhccceEEEEecCCC-
Confidence 9999999999999999999999876 666777777 9999999999764321 222 24457899999875321
Q ss_pred hhhCHHHHHHHHHHHHHHHHcCCCC--CcceeeeccccHHHHHHHHHcCCccceEEEEecCCCC
Q psy1119 698 FFAEQEWKMSLQKALQKAIDAGAVQ--PLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRDEEP 759 (1392)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~l~~g~l~--pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~~~~ 759 (1392)
.+ ..+..+.+++++| ++ ++++++|+++++++||+.+. .||+||++++++.
T Consensus 346 ---~~----~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~GKvvl~~~~~~~ 397 (404)
T 3ip1_A 346 ---GH----GTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TDKSLVKVTMLNE 397 (404)
T ss_dssp ---ST----THHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TCTTCSCEEEECC
T ss_pred ---ch----HHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CCcEEEecCCCCC
Confidence 11 1123456788899 65 46789999999999999987 6899998876543
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=358.27 Aligned_cols=290 Identities=16% Similarity=0.167 Sum_probs=240.2
Q ss_pred CCceEEeCCCCcccccccCCC-CC-----CeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKD-NI-----NHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-- 505 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~-~~-----~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-- 505 (1392)
..+++.+.|.|. + ++ +||+|||.|+|||++|++++.|.++. ..|.++|||++|+|+
T Consensus 12 ~~l~~~~~p~P~--------~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~~--------~~p~v~GhE~~G~V~~v 75 (398)
T 2dph_A 12 RDLRVETVPYPK--------LEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIV--------PKGHVLGHEITGEVVEK 75 (398)
T ss_dssp TEEEEEEECCCC--------SEETTEECTTCEEEEEEEEECCHHHHHHHTTSSCC--------CTTCBCCCCEEEEEEEE
T ss_pred CCEEEEEccCCC--------CCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCCC--------CCCcccCCceEEEEEEE
Confidence 367888888775 4 56 99999999999999999999986432 237899999999997
Q ss_pred -------eCCCeEEEe--------------------------------------ecCCcccceEEeccc--ceEEcCCCC
Q psy1119 506 -------DSGKRVMGL--------------------------------------TSGRSLANCCETDVE--MAWEIPDQW 538 (1392)
Q Consensus 506 -------~vGdrV~gl--------------------------------------~~~g~~a~~v~~~~~--~~~~iPd~l 538 (1392)
++||||++. ...|+|+||+++++. .++++|+++
T Consensus 76 G~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~~ 155 (398)
T 2dph_A 76 GSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKE 155 (398)
T ss_dssp CTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSHH
T ss_pred CCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCCCC
Confidence 468999852 124899999999987 899999999
Q ss_pred CHhh----HhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCC
Q psy1119 539 TLED----AATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFI 613 (1392)
Q Consensus 539 s~e~----AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l 613 (1392)
|+++ ||+++++++|||+++ ..+++++|++|||+|+ |+||++++|+|+++|+ +|++++.+++|++++++ +
T Consensus 156 ~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----l 229 (398)
T 2dph_A 156 QAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----A 229 (398)
T ss_dssp HHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----T
T ss_pred ChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----c
Confidence 9998 899999999999999 6889999999999975 9999999999999999 89999999999999875 6
Q ss_pred CcCceeeCCCccH-HHHHHHHcCCCcceEEEecCchh---------------HHHHHHhcccCCeEEEEEcccccc----
Q psy1119 614 KEENIGNSRDTSF-EQLVMKRTKGRGVDLVLNSLAEE---------------KLQASVRCLAQGGRFLEIGKFDLA---- 673 (1392)
Q Consensus 614 ~~~~i~~s~~~~~-~~~i~~~T~g~GvDvVlds~~~~---------------~l~~s~~~La~~Gr~v~iG~~~~~---- 673 (1392)
|++ ++|+++.++ .+.+++.|+++|+|+|||+++++ .++.++++|+++|+++.+|.....
T Consensus 230 Ga~-~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~ 308 (398)
T 2dph_A 230 GFE-TIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDP 308 (398)
T ss_dssp TCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSC
T ss_pred CCc-EEcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecccccccccc
Confidence 775 889888786 88999999988999999999864 589999999999999999965210
Q ss_pred -------cCccccc-cccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCC--C--cceeeeccccHHHHHHHH
Q psy1119 674 -------NNNMLGM-EVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQ--P--LVRTIFPEDKVEEAFRYM 741 (1392)
Q Consensus 674 -------~~~~l~~-~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--p--l~~~vf~l~ev~eA~~~l 741 (1392)
....+.+ .++.+++++.+..... ......+.+++.+|+++ + +++++|+++++++||+.+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~---------~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~ 379 (398)
T 2dph_A 309 VNKDAGSGRLHLDFGKMWTKSIRIMTGMAPV---------TNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKF 379 (398)
T ss_dssp SSHHHHTTEEEEEHHHHHHTTCEEECSSCCG---------GGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHH
T ss_pred ccccccCCcccccHHHHhhcCCEEEEeccCc---------HHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHH
Confidence 1111221 3467889888754321 11234556788999998 6 678999999999999999
Q ss_pred HcCCccceEEEEecC
Q psy1119 742 AAGKHIGKVIIKIRD 756 (1392)
Q Consensus 742 ~~g~~~GKvVI~~~~ 756 (1392)
.+++. ||+||.++.
T Consensus 380 ~~~~~-gKvvv~~~~ 393 (398)
T 2dph_A 380 DKGSP-AKFVIDPHG 393 (398)
T ss_dssp HTTCS-CEEEECTTS
T ss_pred hcCCc-eEEEEecCc
Confidence 99888 999998754
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-35 Score=351.52 Aligned_cols=289 Identities=15% Similarity=0.132 Sum_probs=236.6
Q ss_pred CceEEeCCCCcccccccCCCC-CCe------EEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDN-INH------DIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-- 505 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~-~~e------vlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-- 505 (1392)
.+++.+.|.|. +. ++| |+|||.|+|||+.|++++.|.++. ..|.++|||++|+|+
T Consensus 13 ~l~~~~~p~P~--------~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--------~~p~v~GhE~~G~V~~v 76 (398)
T 1kol_A 13 KVEVQKIDYPK--------MQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA--------QVGLVLGHEITGEVIEK 76 (398)
T ss_dssp EEEEEEECCCC--------SBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCC--------CTTCBCCCCEEEEEEEE
T ss_pred ceEEEEecCCC--------CCCCCcccccceEEEEEEEEeechhhHHHHcCCCCC--------CCCcccCcccEEEEEEE
Confidence 57888888875 45 777 999999999999999999986532 136799999999997
Q ss_pred -------eCCCeEEEe-------------------------------------ecCCcccceEEeccc--ceEEcCCCCC
Q psy1119 506 -------DSGKRVMGL-------------------------------------TSGRSLANCCETDVE--MAWEIPDQWT 539 (1392)
Q Consensus 506 -------~vGdrV~gl-------------------------------------~~~g~~a~~v~~~~~--~~~~iPd~ls 539 (1392)
++||||+.. ...|+|+||+++|+. .++++|++++
T Consensus 77 G~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~~ 156 (398)
T 1kol_A 77 GRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDK 156 (398)
T ss_dssp CTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHH
T ss_pred CCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCCcc
Confidence 478999731 124899999999987 8999999999
Q ss_pred Hhh----HhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCC
Q psy1119 540 LED----AATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIK 614 (1392)
Q Consensus 540 ~e~----AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~ 614 (1392)
+++ ||+++++++|||+++. .+++++|++|||+| +|+||++++|+|+++|+ +|++++.+++|++++++ +|
T Consensus 157 ~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G-aG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lG 230 (398)
T 1kol_A 157 AMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QG 230 (398)
T ss_dssp HHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TT
T ss_pred hhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cC
Confidence 998 7899999999999995 78999999999997 59999999999999999 79999999999999976 67
Q ss_pred cCceeeCCCcc-HHHHHHHHcCCCcceEEEecCchh----------------HHHHHHhcccCCeEEEEEccccc-cc--
Q psy1119 615 EENIGNSRDTS-FEQLVMKRTKGRGVDLVLNSLAEE----------------KLQASVRCLAQGGRFLEIGKFDL-AN-- 674 (1392)
Q Consensus 615 ~~~i~~s~~~~-~~~~i~~~T~g~GvDvVlds~~~~----------------~l~~s~~~La~~Gr~v~iG~~~~-~~-- 674 (1392)
++ ++|+++.+ +.+.+++.|+++|+|+|||+++++ .++.++++++++|+++.+|.... ..
T Consensus 231 a~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~ 309 (398)
T 1kol_A 231 FE-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGA 309 (398)
T ss_dssp CE-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTC
T ss_pred Cc-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCcccc
Confidence 76 67776644 889999999989999999999865 68899999999999999996511 10
Q ss_pred --------Ccccc-ccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCC---CcceeeeccccHHHHHHHHH
Q psy1119 675 --------NNMLG-MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQ---PLVRTIFPEDKVEEAFRYMA 742 (1392)
Q Consensus 675 --------~~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~---pl~~~vf~l~ev~eA~~~l~ 742 (1392)
...+. ..++.+++++.+..... ......+.+++.+|+++ ++++++|+++++++||+.+.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~ 380 (398)
T 1kol_A 310 VDAAAKIGSLSIRFGLGWAKSHSFHTGQTPV---------MKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFD 380 (398)
T ss_dssp SSHHHHTTCCCCCHHHHHHTTCEEEESSCCH---------HHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHH
T ss_pred cccccccccccccHHHHhhcccEEEecccCh---------HHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHh
Confidence 00111 13456888888753211 12234556788899998 46789999999999999999
Q ss_pred cCCccceEEEEecC
Q psy1119 743 AGKHIGKVIIKIRD 756 (1392)
Q Consensus 743 ~g~~~GKvVI~~~~ 756 (1392)
+++. ||+||+++.
T Consensus 381 ~~~~-gKvvi~~~~ 393 (398)
T 1kol_A 381 AGVP-KKFVIDPHK 393 (398)
T ss_dssp HTCS-CEEEECTTC
T ss_pred CCCc-eEEEEEeCC
Confidence 9987 999998743
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=351.32 Aligned_cols=286 Identities=15% Similarity=0.104 Sum_probs=236.9
Q ss_pred ccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhcccc---ccccceeeEEEE
Q psy1119 428 LVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQ---HCVIGFEYSGRL 504 (1392)
Q Consensus 428 ~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~---p~~lG~E~sGvV 504 (1392)
..+|. .+++.+.|.|. ++++||+|||.|+|||+.|++++.|.++.. .. |.++|||++| |
T Consensus 7 ~~~~~--~l~~~~~p~P~--------~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-------~~~~~p~v~G~E~~G-V 68 (357)
T 2b5w_A 7 KRGED--RPVVIEKPRPE--------PESGEALVRTLRVGVCGTDHEVIAGGHGGF-------PEGEDHLVLGHEAVG-V 68 (357)
T ss_dssp ETTCS--SCEEEECCCCC--------CCTTEEEEEEEEEEECHHHHHHHHSCSTTS-------CTTCSEEECCSEEEE-E
T ss_pred eCCCC--ceEEEECCCCC--------CCcCEEEEEEeEEeechhcHHHHcCCCCCC-------CCCCCCcccCceeEE-E
Confidence 34443 47888988875 689999999999999999999999975421 23 6799999999 8
Q ss_pred ee--------CCCeEEEe--------------------------------ecCCcccceEEecccceEEcCCCCCHhhHh
Q psy1119 505 RD--------SGKRVMGL--------------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAA 544 (1392)
Q Consensus 505 ~~--------vGdrV~gl--------------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA 544 (1392)
++ +||||++. ...|+|+||+++|+..++++|+++| ++ |
T Consensus 69 ~~vG~~~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~-a 146 (357)
T 2b5w_A 69 VVDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-EL-G 146 (357)
T ss_dssp EEECTTSSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TT-G
T ss_pred EEECCCCCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hh-h
Confidence 74 68999875 1258999999999999999999999 54 5
Q ss_pred hhhHHHHHHHHHHHHhcCCCCC------CEEEEEcCCchHHHHH-HHHH-HHcCCE-EEEEecChh---hHHHHHHHCCC
Q psy1119 545 TVPCVYATAVYAMFICGQMQKG------ESILIHAGSGGVGQAA-INLA-RYMDAE-IFTTVGTPE---KREFIRKTFPF 612 (1392)
Q Consensus 545 ~lp~~~~TA~~aL~~~a~l~~G------etVLI~ga~GgVG~aa-IqlA-~~~Ga~-V~~tv~s~e---k~~~l~~~~p~ 612 (1392)
+++.+++|||+++ ..+++++| ++|||+|| |+||+++ +|+| +++|++ |++++++++ |++++++
T Consensus 147 al~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~---- 220 (357)
T 2b5w_A 147 FLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE---- 220 (357)
T ss_dssp GGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----
T ss_pred hhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----
Confidence 6888999999999 67889999 99999988 9999999 9999 999997 999999988 9999976
Q ss_pred CCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCccccc-cc----cCCC
Q psy1119 613 IKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGM-EV----FMRE 686 (1392)
Q Consensus 613 l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~~----~~k~ 686 (1392)
+|++++ |+++.++.+ +++. ++ |+|+|||++++. .++.++++++++|+++.+|.... ....+++ .+ +.++
T Consensus 221 lGa~~v-~~~~~~~~~-i~~~-~g-g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~ 295 (357)
T 2b5w_A 221 LDATYV-DSRQTPVED-VPDV-YE-QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSD-WAFEVDAGAFHREMVLHN 295 (357)
T ss_dssp TTCEEE-ETTTSCGGG-HHHH-SC-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCC-CCCCCCHHHHHHHHHHTT
T ss_pred cCCccc-CCCccCHHH-HHHh-CC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCC-CCceecHHHHhHHHHhCC
Confidence 788999 998888888 8888 66 999999999875 78999999999999999997642 1222222 23 5789
Q ss_pred cEEEEEechhhhhhCHHHHHHHHHHHHHHHHcC--C-CCCcceeeeccccHHHHHHHHHcCCccceEEEEecC
Q psy1119 687 TSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAG--A-VQPLVRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRD 756 (1392)
Q Consensus 687 ~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g--~-l~pl~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~ 756 (1392)
+++.|+.... . ..+..+.+++++| + ++|+++++|+++++++||+.+ +..||+||++++
T Consensus 296 ~~i~g~~~~~-----~----~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~~ 356 (357)
T 2b5w_A 296 KALVGSVNSH-----V----EHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEFST 356 (357)
T ss_dssp CEEEECCCCC-----H----HHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEECCC
T ss_pred eEEEEeccCC-----H----HHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEecC
Confidence 9999875432 1 2344556778888 8 688888999999999999988 457999998753
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=331.33 Aligned_cols=292 Identities=16% Similarity=0.201 Sum_probs=241.4
Q ss_pred CCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-------
Q psy1119 433 MSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR------- 505 (1392)
Q Consensus 433 l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~------- 505 (1392)
++.+++.+.|.|. ++++||+|||.|+|||+.|... .+. ...|.++|||++|+|+
T Consensus 23 ~~~l~~~e~~~P~--------~~~~eVlVkv~a~gi~~~~~~~-~~~----------~~~p~~~g~e~~G~Vv~~~v~~~ 83 (333)
T 1v3u_A 23 QSDFELKTVELPP--------LKNGEVLLEALFLSVDPYMRIA-SKR----------LKEGAVMMGQQVARVVESKNSAF 83 (333)
T ss_dssp GGGEEEEEEECCC--------CCTTCEEEEEEEEECCTHHHHH-TTT----------CCTTSBCCCCEEEEEEEESCTTS
T ss_pred ccceEEEeCCCCC--------CCCCEEEEEEEEeccCHHHccc-cCc----------CCCCcccccceEEEEEecCCCCC
Confidence 3678999988875 6899999999999999988732 111 1136689999999886
Q ss_pred eCCCeEEEeecCCcccceEEecccceEEcCCC----CCHhh-HhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHH
Q psy1119 506 DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQ----WTLED-AATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQ 580 (1392)
Q Consensus 506 ~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~----ls~e~-AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~ 580 (1392)
++||||++. |+|++|+.++++.++++|++ +++++ +|+++++++|||+++...+++++|++|||+||+|++|+
T Consensus 84 ~vGdrV~~~---g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~ 160 (333)
T 1v3u_A 84 PAGSIVLAQ---SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGS 160 (333)
T ss_dssp CTTCEEEEC---CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHH
T ss_pred CCCCEEEec---CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHH
Confidence 589999884 78999999999999999997 88988 58999999999999988899999999999999999999
Q ss_pred HHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCC-ccHHHHHHHHcCCCcceEEEecCchhHHHHHHhccc
Q psy1119 581 AAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRD-TSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLA 659 (1392)
Q Consensus 581 aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~-~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La 659 (1392)
+++|+|+..|++|+++++++++.+.+++ +++++++|.++ .++.+.+.+.++ .++|+++|+.+++.+..++++++
T Consensus 161 ~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~~~~~~~~-~~~d~vi~~~g~~~~~~~~~~l~ 235 (333)
T 1v3u_A 161 VVGQIAKLKGCKVVGAAGSDEKIAYLKQ----IGFDAAFNYKTVNSLEEALKKASP-DGYDCYFDNVGGEFLNTVLSQMK 235 (333)
T ss_dssp HHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCSEEEETTSCSCHHHHHHHHCT-TCEEEEEESSCHHHHHHHHTTEE
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCCcEEEecCCHHHHHHHHHHHhC-CCCeEEEECCChHHHHHHHHHHh
Confidence 9999999999999999999999998854 57788999888 888888988887 48999999999988999999999
Q ss_pred CCeEEEEEcccccccC-----c-cccccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCcceeeecccc
Q psy1119 660 QGGRFLEIGKFDLANN-----N-MLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPLVRTIFPEDK 733 (1392)
Q Consensus 660 ~~Gr~v~iG~~~~~~~-----~-~l~~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl~~~vf~l~e 733 (1392)
++|+++.+|....... . .....++.+++++.|+....+. +....+.++.+.+++++|++++.+..+|++++
T Consensus 236 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~---~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~ 312 (333)
T 1v3u_A 236 DFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQ---GDVREKALRDLMKWVLEGKIQYHEHVTKGFEN 312 (333)
T ss_dssp EEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCC---THHHHHHHHHHHHHHHTTSSCCCEEEEECGGG
T ss_pred cCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcc---hHHHHHHHHHHHHHHHCCCccCccccccCHHH
Confidence 9999999997543110 0 1112355788999997654321 12234456667788999999998777899999
Q ss_pred HHHHHHHHHcCCccceEEEEe
Q psy1119 734 VEEAFRYMAAGKHIGKVIIKI 754 (1392)
Q Consensus 734 v~eA~~~l~~g~~~GKvVI~~ 754 (1392)
+++||+.+.+++..||+||++
T Consensus 313 ~~~A~~~~~~~~~~gKvvl~~ 333 (333)
T 1v3u_A 313 MPAAFIEMLNGANLGKAVVTA 333 (333)
T ss_dssp HHHHHHHHHTTCCSBEEEEEC
T ss_pred HHHHHHHHHcCCCCceEEEeC
Confidence 999999999999999999864
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=342.76 Aligned_cols=290 Identities=12% Similarity=0.101 Sum_probs=233.9
Q ss_pred eccCCCCCCceEEeCCCCcccccccCCCCC-CeEEEEEEEEecChhhHHHhcC--CCChhhhhhhcccc---ccccceee
Q psy1119 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNI-NHDIAQIYYSSINFRDIMLTTA--KLAPEVIESRRLYQ---HCVIGFEY 500 (1392)
Q Consensus 427 ~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~-~evlV~V~a~gln~~Dv~~~~G--~~~~~~~~~~~~~~---p~~lG~E~ 500 (1392)
...+|. .+++.+.|.|. +++ +||+|||.|+|||+.|++++.| .++.. .. |.++|||+
T Consensus 6 ~~~~g~--~l~~~~~~~P~--------~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~-------~~~~~p~v~G~E~ 68 (366)
T 2cdc_A 6 VKPPNA--GVQVKDVDEKK--------LDSYGKIKIRTIYNGICGADREIVNGKLTLSTL-------PKGKDFLVLGHEA 68 (366)
T ss_dssp ECTTSC--CCEEEECCGGG--------SCCCSSEEEEEEEEEECHHHHHHHTTCC--------------CCSCEECCSEE
T ss_pred EeCCCC--ceEEEECcCCC--------CCCCCEEEEEEEEEeeccccHHHHcCCCCCCCC-------CcCCCCCcCCcce
Confidence 344554 28889988875 688 9999999999999999999998 55411 13 77999999
Q ss_pred EEEEe------eCCCeEEEe-----------------------------e-cCCcccceEEecccceEEcCCCCCHhhHh
Q psy1119 501 SGRLR------DSGKRVMGL-----------------------------T-SGRSLANCCETDVEMAWEIPDQWTLEDAA 544 (1392)
Q Consensus 501 sGvV~------~vGdrV~gl-----------------------------~-~~g~~a~~v~~~~~~~~~iPd~ls~e~AA 544 (1392)
+|+|+ ++||||++. . ..|+|+||+++++..++++|+++| ++||
T Consensus 69 ~G~V~~~~~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aa 147 (366)
T 2cdc_A 69 IGVVEESYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGI 147 (366)
T ss_dssp EEEECSCCSSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGG
T ss_pred EEEEEeCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhh
Confidence 99995 589999863 1 458999999999999999999999 8765
Q ss_pred hhhHHHHHHHHHHH--H--hcCCC--C-------CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh---hhHHHHHH
Q psy1119 545 TVPCVYATAVYAMF--I--CGQMQ--K-------GESILIHAGSGGVGQAAINLARYMDAEIFTTVGTP---EKREFIRK 608 (1392)
Q Consensus 545 ~lp~~~~TA~~aL~--~--~a~l~--~-------GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~---ek~~~l~~ 608 (1392)
++.+++|||+++. . .++++ + |++|||+|| |++|++++|+|+..|++|+++++++ +|++++++
T Consensus 148 -l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~ 225 (366)
T 2cdc_A 148 -LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEE 225 (366)
T ss_dssp -GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHH
T ss_pred -hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHH
Confidence 7789999999997 5 78899 8 999999998 9999999999999999999999998 88888876
Q ss_pred HCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchh-HH-HHHHhcccCCeEEEEEcccccccCccccc-c---c
Q psy1119 609 TFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEE-KL-QASVRCLAQGGRFLEIGKFDLANNNMLGM-E---V 682 (1392)
Q Consensus 609 ~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~-~l-~~s~~~La~~Gr~v~iG~~~~~~~~~l~~-~---~ 682 (1392)
++++++ | ++ ++.+.+++ ++ +|+|+|||+++.. .+ +.++++++++|+++.+|...... ..++. . +
T Consensus 226 ----~ga~~v-~-~~-~~~~~~~~-~~-~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~ 295 (366)
T 2cdc_A 226 ----TKTNYY-N-SS-NGYDKLKD-SV-GKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGS-VPLDYKTLQEI 295 (366)
T ss_dssp ----HTCEEE-E-CT-TCSHHHHH-HH-CCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCE-EEEEHHHHHHH
T ss_pred ----hCCcee-c-hH-HHHHHHHH-hC-CCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCc-cccChhhhHHH
Confidence 578888 8 66 77778887 65 6899999999874 77 99999999999999999754321 12222 3 5
Q ss_pred cCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCC------CCCcceeeeccccHHHHHHHH-HcCCccceEEEEec
Q psy1119 683 FMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGA------VQPLVRTIFPEDKVEEAFRYM-AAGKHIGKVIIKIR 755 (1392)
Q Consensus 683 ~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~------l~pl~~~vf~l~ev~eA~~~l-~~g~~~GKvVI~~~ 755 (1392)
+.+++++.|+.... . ..+..+.+++.+|+ ++++++++|+++++++||+.+ ..++..||+||+++
T Consensus 296 ~~~~~~i~g~~~~~-----~----~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~~ 366 (366)
T 2cdc_A 296 VHTNKTIIGLVNGQ-----K----PHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILWE 366 (366)
T ss_dssp HHTTCEEEECCCCC-----H----HHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEECC
T ss_pred HhcCcEEEEecCCC-----H----HHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEecC
Confidence 67899999875421 2 22344556777787 668888999999999999994 34677899999863
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-33 Score=327.60 Aligned_cols=303 Identities=16% Similarity=0.230 Sum_probs=240.4
Q ss_pred CCCC--CceEE--eCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-
Q psy1119 431 GDMS--SLTWE--QGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR- 505 (1392)
Q Consensus 431 G~l~--~l~~~--~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~- 505 (1392)
+.+. .+++. +.|.|. + ++++||+|||.|+|+|+.|. ...|....... ....|.++|||++|++.
T Consensus 16 ~~p~~~~l~~~~~~~~~P~-~------~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~---~~~~p~v~G~e~~G~~~~ 84 (345)
T 2j3h_A 16 GFPTESDFDFTTTTVELRV-P------EGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTA---ALAQAYTPGQPIQGYGVS 84 (345)
T ss_dssp SSCCGGGEEEEEEEEECCS-C------SSSSCEEEEECEEECCTTHH-HHHBC------------CCCCTTSBCEEEEEE
T ss_pred CCCCccceeEEEeecCCCC-C------CCCCEEEEEEEEecCCHHHH-hhcccCCCCcc---ccCCCcCCCCeeecceEE
Confidence 5555 68887 667664 1 58899999999999999885 45565422100 01236789999888754
Q ss_pred ----------eCCCeEEEeecCCcccceEEecccc--eEEcCC---CCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEE
Q psy1119 506 ----------DSGKRVMGLTSGRSLANCCETDVEM--AWEIPD---QWTLEDAATVPCVYATAVYAMFICGQMQKGESIL 570 (1392)
Q Consensus 506 ----------~vGdrV~gl~~~g~~a~~v~~~~~~--~~~iPd---~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVL 570 (1392)
++||||+++ |+|++|+.+++.. ++++|+ +++++ +|+++++++|||+++...+++++|++||
T Consensus 85 GvV~~~v~~~~vGdrV~~~---g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vl 160 (345)
T 2j3h_A 85 RIIESGHPDYKKGDLLWGI---VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVY 160 (345)
T ss_dssp EEEEECSTTCCTTCEEEEE---EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEE
T ss_pred EEEecCCCCCCCCCEEEee---cCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEE
Confidence 479999875 6899999999876 999996 46766 6889999999999998889999999999
Q ss_pred EEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCc-cHHHHHHHHcCCCcceEEEecCchh
Q psy1119 571 IHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDT-SFEQLVMKRTKGRGVDLVLNSLAEE 649 (1392)
Q Consensus 571 I~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~-~~~~~i~~~T~g~GvDvVlds~~~~ 649 (1392)
|+||+|++|++++|+|+..|++|+++++++++++++++. +++++++|.++. ++.+.+.+.++ +|+|+|||+.+++
T Consensus 161 I~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~~d~~~~~~~~~~~~~~~~-~~~d~vi~~~g~~ 236 (345)
T 2j3h_A 161 VSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK---FGFDDAFNYKEESDLTAALKRCFP-NGIDIYFENVGGK 236 (345)
T ss_dssp ESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---SCCSEEEETTSCSCSHHHHHHHCT-TCEEEEEESSCHH
T ss_pred EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCceEEecCCHHHHHHHHHHHhC-CCCcEEEECCCHH
Confidence 999999999999999999999999999999999999852 678889998764 78888888875 6899999999988
Q ss_pred HHHHHHhcccCCeEEEEEccccccc----Ccccc-ccccCCCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCCCCCc
Q psy1119 650 KLQASVRCLAQGGRFLEIGKFDLAN----NNMLG-MEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGAVQPL 724 (1392)
Q Consensus 650 ~l~~s~~~La~~Gr~v~iG~~~~~~----~~~l~-~~~~~k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~pl 724 (1392)
.++.++++++++|+++.+|...... ...+. ..++.+++++.|+....+.. .....+..+.+++++|+++++
T Consensus 237 ~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~----~~~~~~~~~~~l~~~g~i~~~ 312 (345)
T 2j3h_A 237 MLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYD----KYSKFLEFVLPHIREGKITYV 312 (345)
T ss_dssp HHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGG----GHHHHHHHHHHHHHTTSSCCC
T ss_pred HHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhh----hHHHHHHHHHHHHHCCCCcCc
Confidence 8999999999999999998654211 11111 23456788998875443211 123445667788999999998
Q ss_pred ceeeeccccHHHHHHHHHcCCccceEEEEecC
Q psy1119 725 VRTIFPEDKVEEAFRYMAAGKHIGKVIIKIRD 756 (1392)
Q Consensus 725 ~~~vf~l~ev~eA~~~l~~g~~~GKvVI~~~~ 756 (1392)
+.++|+++++.+||+.+.++++.||+|+.+++
T Consensus 313 ~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~ 344 (345)
T 2j3h_A 313 EDVADGLEKAPEALVGLFHGKNVGKQVVVVAR 344 (345)
T ss_dssp EEEEESGGGSHHHHHHHHTTCCSSEEEEESSC
T ss_pred ccccCCHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence 88899999999999999999999999998854
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-31 Score=314.64 Aligned_cols=298 Identities=19% Similarity=0.252 Sum_probs=227.0
Q ss_pred cchHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcccCCCCCCC
Q psy1119 1019 ATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSFENDDKSKP 1097 (1392)
Q Consensus 1019 ~~~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~~~~~~~~~ 1097 (1392)
.+.|+++|+++|++ +.|+.+++||++|+|||+|++|.++|+++||+++++.++ .++|+++|++.+.........
T Consensus 13 e~~l~~~~~~~l~~---~~i~~~~~ff~lGgdSl~a~~l~~~l~~~~~~~~~~~~~~~~~t~~~la~~~~~~~~~~~~-- 87 (329)
T 3tej_A 13 ETIIAAAFSSLLGC---DVQDADADFFALGGHXLLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATIIDAEEDSTRR-- 87 (329)
T ss_dssp HHHHHHHHHHHHTC----CCSTTCBTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHCCBHHHHHHHHHSCTTSSTT--
T ss_pred HHHHHHHHHHHhCC---CCCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHhhcccccc--
Confidence 45789999999998 459999999999999999999999999999999999999 899999999998754321100
Q ss_pred ccccccCCcccccccCCCChhhHHHHHHhhccccccCCcccccCCccCCCCccccCCCCCceeEeecCCCccccccHHHH
Q psy1119 1098 VSTEASGGQVTALSVEDIPDVGIQYLMRTIGDEILANKPVIRLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIATVLEPLA 1177 (1392)
Q Consensus 1098 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~pLF~vp~agG~~~~y~~La 1177 (1392)
....+++++. .|.++||||+|+++|+.+.|.+|+
T Consensus 88 ----------------------------------~~~~~~~~l~------------~g~~~~l~~lhg~~~~~~~~~~l~ 121 (329)
T 3tej_A 88 ----------------------------------MGFETILPLR------------EGNGPTLFCFHPASGFAWQFSVLS 121 (329)
T ss_dssp ----------------------------------TTSSSEEEEE------------CCSSCEEEEECCTTSCCGGGGGGG
T ss_pred ----------------------------------cccceeeecc------------CCCCCcEEEEeCCcccchHHHHHH
Confidence 0011222222 244689999999999999999999
Q ss_pred hhcCCceEEEecCC------CCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHHHHHHHHHHHcCCcc-EEEE
Q psy1119 1178 KNINAQVLVFQFDH------TNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYL 1250 (1392)
Q Consensus 1178 ~~L~~~~~v~~l~~------e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvL 1250 (1392)
++|.....++.++. ..+..+++++|+.|++.|+.. ++.+||+|+||||||.||+|+|++|++.|..+ .|++
T Consensus 122 ~~L~~~~~v~~~d~~g~~~~~~~~~~~~~~a~~~~~~i~~~--~~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl 199 (329)
T 3tej_A 122 RYLDPQWSIIGIQSPRPNGPMQTAANLDEVCEAHLATLLEQ--QPHGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGL 199 (329)
T ss_dssp GTSCTTCEEEEECCCTTTSHHHHCSSHHHHHHHHHHHHHHH--CSSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HhcCCCCeEEEeeCCCCCCCCCCCCCHHHHHHHHHHHHHHh--CCCCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEE
Confidence 99998888888861 123579999999999999854 47899999999999999999999999999988 8899
Q ss_pred EeCCCCCCcc----ccCCC-CChHHHHHH----HHhcCCccccCCHHHHHHHHHHHHHHHHhhccccCCCCCcccceEEE
Q psy1119 1251 VDSAPDYVLT----SLRKL-PDWNAKLNY----FLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITL 1321 (1392)
Q Consensus 1251 iD~~p~~~~~----~l~~~-~~~~~~l~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~y~~~~~~~~~~pi~l 1321 (1392)
+|+.|+.... ..... ....+.+.. +...... ....+.+..+...+.....+...|++. ++++|+++
T Consensus 200 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~pv~l 274 (329)
T 3tej_A 200 LDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQG--STSTELFTTIEGNYADAVRLLTTAHSV---PFDGKATL 274 (329)
T ss_dssp ESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHTTCC--CSCCHHHHHHHHHHHHHHHHHTTCCCC---CEEEEEEE
T ss_pred eCCCCCCccccccccccccChhhHHHHHHHHHHHHHhccc--cccHHHHHHHHHHHHHHHHHHhcCCCC---CcCCCeEE
Confidence 9998875210 00111 111111111 1111111 123455666666666667777888776 79999999
Q ss_pred EeeCCCC-CCChhhcCcccccCCCeEEEEEccCccccccChHHHHHHHhhhcccC
Q psy1119 1322 LRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDSTDF 1375 (1392)
Q Consensus 1322 ~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~~~L~ 1375 (1392)
|+++++. ...+...+|++++ +.++++.++|+|++|++++....++..|.+.|.
T Consensus 275 ~~~~~d~~~~~~~~~~w~~~~-~~~~~~~v~g~H~~~~~~~~~~~ia~~l~~~L~ 328 (329)
T 3tej_A 275 FVAERTLQEGMSPERAWSPWI-AELDIYRQDCAHVDIISPGTFEKIGPIIRATLN 328 (329)
T ss_dssp EEEGGGCCTTCCHHHHHTTTE-EEEEEEEESSCGGGGGSTTTHHHHHHHHHHHHC
T ss_pred EEeccCCCCCCCchhhHHHhc-CCcEEEEecCChHHhCCChHHHHHHHHHHHHhc
Confidence 9999876 4444556899988 579999999999999999988888888887764
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=322.37 Aligned_cols=230 Identities=20% Similarity=0.252 Sum_probs=201.2
Q ss_pred cccCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEe-cCCCcc----------cHHHHHHHHHHhcCCceEEEEeccCC
Q psy1119 776 YYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLT-SRSGVK----------NGYQALRIKIWKSYDVQVLISTDDIT 844 (1392)
Q Consensus 776 ~~~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~-sRs~~~----------~~~~~~~~~~l~~~G~~v~~~~~Dv~ 844 (1392)
..++++++||||||+||||+++|+||+++|+++|+++ +|++.. .+..++.+++++..|.++.+++|||+
T Consensus 246 ~~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvt 325 (525)
T 3qp9_A 246 PWWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLT 325 (525)
T ss_dssp CSSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTT
T ss_pred ceecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCC
Confidence 4578999999999999999999999999999999999 999644 34445667777888999999999999
Q ss_pred CHHHHHHHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC---CCeEEEeccccc
Q psy1119 845 TEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT---LGQFVVFSSVSC 921 (1392)
Q Consensus 845 ~~~~v~~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~---l~~fV~~SS~s~ 921 (1392)
|.++++++++++.++++||+||||||+..++.+.+++.++|++++++|+.|+++|++++.+.+.+ +++||+|||+++
T Consensus 326 d~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~ 405 (525)
T 3qp9_A 326 DAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAA 405 (525)
T ss_dssp SHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGG
T ss_pred CHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHH
Confidence 99999999999877899999999999999999999999999999999999999999999876532 799999999999
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHcCCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccCC
Q psy1119 922 GRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSE 1001 (1392)
Q Consensus 922 ~~G~~gq~~Yaaana~ld~la~~r~~~Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~ 1001 (1392)
..|++||++|++||+|+++|+++++..|+++.+|+||.| ++||..+.. ....+...|..++.++++++.+..++..+.
T Consensus 406 ~~g~~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~-~tgm~~~~~-~~~~~~~~g~~~l~pee~a~~l~~~l~~~~ 483 (525)
T 3qp9_A 406 IWGGAGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW-EGSRVTEGA-TGERLRRLGLRPLAPATALTALDTALGHGD 483 (525)
T ss_dssp TTCCTTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB-TTSGGGSSH-HHHHHHHTTBCCBCHHHHHHHHHHHHHHTC
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc-ccccccchh-hHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999 788875432 223455678888899999999999998877
Q ss_pred CeEEeh
Q psy1119 1002 PIVASM 1007 (1392)
Q Consensus 1002 ~~~~~~ 1007 (1392)
+.+...
T Consensus 484 ~~v~v~ 489 (525)
T 3qp9_A 484 TAVTIA 489 (525)
T ss_dssp SEEEEC
T ss_pred CeEEEE
Confidence 765543
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-30 Score=315.93 Aligned_cols=228 Identities=29% Similarity=0.413 Sum_probs=200.6
Q ss_pred ccCCC--CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHH
Q psy1119 777 YADSN--KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLT 854 (1392)
Q Consensus 777 ~~~~~--~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~ 854 (1392)
.++++ ++||||||+||||+++|+||+++|+++|++++|++...+...+..++++..|.++.++.||++|.++++++++
T Consensus 233 ~~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~ 312 (496)
T 3mje_A 233 GKRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLA 312 (496)
T ss_dssp TCCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 35566 9999999999999999999999999999999999766666667778888899999999999999999999999
Q ss_pred HHhhcCCccEEEECcccC-CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHH
Q psy1119 855 EANKLGPVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGM 933 (1392)
Q Consensus 855 ~~~~~g~I~gvi~~Agv~-~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaa 933 (1392)
++.+.++||+||||||+. .++++.+++.++|++++++|+.|+++|++++.+. .+++||+|||+++..|++||++|++
T Consensus 313 ~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~--~~~~iV~~SS~a~~~g~~g~~~YaA 390 (496)
T 3mje_A 313 ELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL--DLDAFVLFSSGAAVWGSGGQPGYAA 390 (496)
T ss_dssp TCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS--CCSEEEEEEEHHHHTTCTTCHHHHH
T ss_pred HHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc--CCCEEEEEeChHhcCCCCCcHHHHH
Confidence 984448999999999998 8899999999999999999999999999998765 6799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccCCCeEEeh
Q psy1119 934 ANSIMERICEARRAEGLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASM 1007 (1392)
Q Consensus 934 ana~ld~la~~r~~~Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~~~~~~~ 1007 (1392)
+|+|+++|+++|+..|+++.+|+||.|.+.||..+.. ....+...|..++.++++++.++.++..+.+.....
T Consensus 391 aKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~-~~~~l~~~g~~~l~pe~~~~~l~~~l~~~~~~~~v~ 463 (496)
T 3mje_A 391 ANAYLDALAEHRRSLGLTASSVAWGTWGEVGMATDPE-VHDRLVRQGVLAMEPEHALGALDQMLENDDTAAAIT 463 (496)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEECEESSSCC-------CHHHHHTTEEEECHHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHHHhcCCeEEEEECCcccCCccccChH-HHHHHHhcCCCCCCHHHHHHHHHHHHcCCCceEEEE
Confidence 9999999999999999999999999999999876532 233556678888899999999999998777655443
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-29 Score=292.90 Aligned_cols=261 Identities=25% Similarity=0.381 Sum_probs=168.3
Q ss_pred CcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcccCCCCCCCccccccCCcccccccCCCChhhHHHHHHh
Q psy1119 1048 GMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSFENDDKSKPVSTEASGGQVTALSVEDIPDVGIQYLMRT 1126 (1392)
Q Consensus 1048 G~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1126 (1392)
|+|||+|++|+++|++++|+.+++.++ .++|++.|+
T Consensus 1 GGdSL~a~~l~~rl~~~~g~~l~~~~lf~~pt~~~l~------------------------------------------- 37 (316)
T 2px6_A 1 GSHNLACPTPKEDGLAQQQTQLNLRSLLVNPEGPTLM------------------------------------------- 37 (316)
T ss_dssp -------------------------CCCCCTTSCSEE-------------------------------------------
T ss_pred CCchHHHHHHHHHHHHHHhhccchhhhhcCCCcCeeE-------------------------------------------
Confidence 899999999999999999999999998 778754332
Q ss_pred hccccccCCcccccCCccCCCCccccCCCCCceeEeecCCCccccccHHHHhhcCCceEEEecCCCCCCCCHHHHHHHHH
Q psy1119 1127 IGDEILANKPVIRLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTNPPDTIPEMADSLL 1206 (1392)
Q Consensus 1127 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~~e~~~~sieelA~~y~ 1206 (1392)
+++. ..+.++||||||++||+++.|.+|+++|+.++..+++..+++..+++++|+.|+
T Consensus 38 ------------~l~~----------~~~~~~~l~~~hg~~g~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~~~a~~~~ 95 (316)
T 2px6_A 38 ------------RLNS----------VQSSERPLFLVHPIEGSTTVFHSLASRLSIPTYGLQCTRAAPLDSIHSLAAYYI 95 (316)
T ss_dssp ------------ESCC----------CCCSSCCEEEECCTTCCSGGGHHHHHHCSSCEEEECCCTTSCTTCHHHHHHHHH
T ss_pred ------------Eccc----------CCCCCCeEEEECCCCCCHHHHHHHHHhcCCCEEEEECCCCCCcCCHHHHHHHHH
Confidence 1110 023347999999999999999999999984444444446667789999999999
Q ss_pred HHHhhhccCCCCcEEEEeechhHHHHHHHHHHHHHcCCc---c-EEEEEeCCCCCCcc-------ccC------------
Q psy1119 1207 PHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTK---C-HLYLVDSAPDYVLT-------SLR------------ 1263 (1392)
Q Consensus 1207 ~~I~~~q~qp~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~---v-~LvLiD~~p~~~~~-------~l~------------ 1263 (1392)
+.|+.. ++.+||+|+||||||.||||+|++|+++|.. + .|+++|+.|++... ...
T Consensus 96 ~~i~~~--~~~~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l 173 (316)
T 2px6_A 96 DCIRQV--QPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPTYVLAYTQSYRAKLTPGCEAEAETEAI 173 (316)
T ss_dssp HHHTTT--CSSCCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCSSCC-----------------CHHHHHHH
T ss_pred HHHHHh--CCCCCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCCchHhhhhhhhhccccCcccchhhHHHHH
Confidence 999854 4678999999999999999999999999987 7 78899997653210 000
Q ss_pred --------------------CCCChHHHHHHHHhcCCcc-ccCCHHHHHHHHHHHHHHHHhhccccCCCCCcccceEEEE
Q psy1119 1264 --------------------KLPDWNAKLNYFLDLMPED-ATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLL 1322 (1392)
Q Consensus 1264 --------------------~~~~~~~~l~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~y~~~~~~~~~~pi~l~ 1322 (1392)
....+++.+..+.+.+... ...+.+.+..+.+.+++++++...|+|.. ++++|+++|
T Consensus 174 ~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~p~~--~~~~pi~~~ 251 (316)
T 2px6_A 174 CFFVQQFTDMEHNRVLEALLPLKGLEERVAAAVDLIIKSHQGLDRQELSFAARSFYYKLRAAEQYTPKA--KYHGNVMLL 251 (316)
T ss_dssp HHHHHHHSCCCHHHHHHHHTTSCSHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHTCCCCS--CBCSCEEEE
T ss_pred HHHHHHhcCcchHHHHHHHhcCCCHHHHHHHHHHhcchhhccCCHHHHHHHHHHHHHHHHHHHhCCCCC--CCCcceEEE
Confidence 0000111111111111110 11256777888899999999999998763 799999999
Q ss_pred eeCCCC-C--CChhhcCcccccCCCeEEEEEccCccccccChHHHHHHHhhhcccCCC
Q psy1119 1323 RPTEQA-L--PTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDSTDFKT 1377 (1392)
Q Consensus 1323 ~a~~~~-~--~~~~~~~W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~~~L~~~ 1377 (1392)
+++++. . .....++|++++.+.++++.++|+||+|++++++..++..++..|...
T Consensus 252 ~~~~d~~~~~~~~~~~~W~~~~~~~~~~~~v~G~H~~~~~~~~~~~la~~l~~~L~~~ 309 (316)
T 2px6_A 252 RAKTGGAYGEDLGADYNLSQVCDGKVSVHVIEGDHRTLLEGSGLESIISIIHSSLAEP 309 (316)
T ss_dssp EECCC--------TTTTTTTTBCSCEEEEEESSCTTGGGSHHHHHHHHHHHHHHC---
T ss_pred eCCCCcccccccCCccCHHHHcCCCcEEEEeCCCchhhcCCccHHHHHHHHHHHhhcc
Confidence 998876 2 344567999999999999999999999999999999999999988764
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-28 Score=300.11 Aligned_cols=223 Identities=25% Similarity=0.402 Sum_probs=190.3
Q ss_pred ccCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 777 YADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 777 ~~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
.++++++||||||+||||+++|+||+++|+++|++++|++...+..++..++++..|.++.++.||++|.++++++++.+
T Consensus 222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i 301 (486)
T 2fr1_A 222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI 301 (486)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 57889999999999999999999999999998999999975444455666778888999999999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
.++++||+||||||+..++.+.+++.++|++++++|+.|+++|++++.+. ++++||+|||+++..|++||++|+++|+
T Consensus 302 ~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~--~~~~~V~~SS~a~~~g~~g~~~Yaaaka 379 (486)
T 2fr1_A 302 GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL--DLTAFVLFSSFASAFGAPGLGGYAPGNA 379 (486)
T ss_dssp CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--CCSEEEEEEEHHHHTCCTTCTTTHHHHH
T ss_pred HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC--CCCEEEEEcChHhcCCCCCCHHHHHHHH
Confidence 66799999999999999999999999999999999999999999998764 6799999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccCCCe
Q psy1119 937 IMERICEARRAEGLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPI 1003 (1392)
Q Consensus 937 ~ld~la~~r~~~Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~~~ 1003 (1392)
++++|+++++..|+++.+|+||.|.+.||..+... ..+...|..++.++++.+.+..++....+.
T Consensus 380 ~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~~~~--~~~~~~g~~~i~~e~~a~~l~~~l~~~~~~ 444 (486)
T 2fr1_A 380 YLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPVA--DRFRRHGVIEMPPETACRALQNALDRAEVC 444 (486)
T ss_dssp HHHHHHHHHHHTTCCCEEEEECCBC--------------CTTTTEECBCHHHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHHhcCCeEEEEECCeeCCCcccchhHH--HHHHhcCCCCCCHHHHHHHHHHHHhCCCCe
Confidence 99999999999999999999999998887654211 122234666788889999998888766553
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-27 Score=292.78 Aligned_cols=222 Identities=29% Similarity=0.453 Sum_probs=196.8
Q ss_pred ccCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 777 YADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 777 ~~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
.++++++||||||+||||+++|++|+++|+++|++++|++...+...+..++++..|.++.++.||++|.++++++++.
T Consensus 255 ~~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~- 333 (511)
T 2z5l_A 255 SWQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA- 333 (511)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH-
T ss_pred CcCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc-
Confidence 4778999999999999999999999999998899999997554445566777888899999999999999999999887
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++||+||||||+..+..+.+++.++|+.++++|+.|+++|++++..+ .++++||+|||+++..|++||++|+++|+
T Consensus 334 ---~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~~V~~SS~a~~~g~~g~~~YaaaKa 409 (511)
T 2z5l_A 334 ---YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI-KGLDAFVLFSSVTGTWGNAGQGAYAAANA 409 (511)
T ss_dssp ---SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-TTCCCEEEEEEGGGTTCCTTBHHHHHHHH
T ss_pred ---CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCEEEEEeCHHhcCCCCCCHHHHHHHH
Confidence 79999999999999999999999999999999999999999987643 36799999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccCCCeEE
Q psy1119 937 IMERICEARRAEGLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVA 1005 (1392)
Q Consensus 937 ~ld~la~~r~~~Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~~~~~ 1005 (1392)
++++|+++++..|+++++|+||.|.+.||...... ..+...|..++.++++++.+..++..+.+.+.
T Consensus 410 ~ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~~--~~~~~~g~~~l~~e~~a~~l~~al~~~~~~v~ 476 (511)
T 2z5l_A 410 ALDALAERRRAAGLPATSVAWGLWGGGGMAAGAGE--ESLSRRGLRAMDPDAAVDALLGAMGRNDVCVT 476 (511)
T ss_dssp HHHHHHHHHHTTTCCCEEEEECCBCSTTCCCCHHH--HHHHHHTBCCBCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHcCCcEEEEECCcccCCcccccccH--HHHHhcCCCCCCHHHHHHHHHHHHhCCCCEEE
Confidence 99999999999999999999999988888765321 23345677788999999999999887776544
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=274.21 Aligned_cols=215 Identities=20% Similarity=0.237 Sum_probs=174.8
Q ss_pred cccHHHHHHHHHcCCc--cceEEEEecCCCCccccCCcccccccCCccccCCCCeEEEEcCcchHHHHHHHHHHHhCCce
Q psy1119 731 EDKVEEAFRYMAAGKH--IGKVIIKIRDEEPTKICTPKVKQLLAVPRYYADSNKSYIICGGLGGFGLELADWLVLRGARK 808 (1392)
Q Consensus 731 l~ev~eA~~~l~~g~~--~GKvVI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ylItGG~gGiG~~lA~~La~~GAr~ 808 (1392)
..++.++++.+.++++ .++.++.+...... + ..+.....++++||||||+||||+++|+||+++|++
T Consensus 171 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~-----~~~~~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~- 239 (454)
T 3u0b_A 171 ATGLESTMRFILSAKSAYVDGQVFRVGAADST-----P-----PADWDKPLDGKVAVVTGAARGIGATIAEVFARDGAT- 239 (454)
T ss_dssp CGGGHHHHHHHSSGGGTTCCSEEEEECSCCCC-----C-----CSCTTSTTTTCEEEESSCSSHHHHHHHHHHHHTTCE-
T ss_pred hhHHHHHHHHhhCCceeEEcCEEEEecCCCCC-----C-----CCccccCCCCCEEEEeCCchHHHHHHHHHHHHCCCE-
Confidence 4478899999988877 77877776543222 1 111122347899999999999999999999999997
Q ss_pred EEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcCC-ccEEEECcccCCCccccCCCHHHHH
Q psy1119 809 LVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLGP-VDGIFNLAVVLKDALFENQTPEDFN 886 (1392)
Q Consensus 809 lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g~-I~gvi~~Agv~~d~~~~~~t~e~~~ 886 (1392)
|++++|+... +...... +..+ +.+++||++|.++++++++++ +++++ ||+||||||+..+..+.+++.++|+
T Consensus 240 Vvl~~r~~~~-~~l~~~~---~~~~--~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~ 313 (454)
T 3u0b_A 240 VVAIDVDGAA-EDLKRVA---DKVG--GTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWD 313 (454)
T ss_dssp EEEEECGGGH-HHHHHHH---HHHT--CEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHH
T ss_pred EEEEeCCccH-HHHHHHH---HHcC--CeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHH
Confidence 8888887422 2222222 2234 357899999999999999998 66775 9999999999999999999999999
Q ss_pred HHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHHHHHHHHHHHHH----cCCCeEEEEcccc
Q psy1119 887 ASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRA----EGLPGLAVEWGAV 960 (1392)
Q Consensus 887 ~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~la~~r~~----~Glp~~ai~~g~~ 960 (1392)
+++++|+.|+++|++++.+.+. +.++||+|||+++..|++||++|+++|+++++|++..+. .|+++.+|.||.+
T Consensus 314 ~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v 393 (454)
T 3u0b_A 314 AVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFI 393 (454)
T ss_dssp HHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSB
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcc
Confidence 9999999999999999877543 568999999999999999999999999999888887664 4899999999988
Q ss_pred Cc
Q psy1119 961 GE 962 (1392)
Q Consensus 961 ~~ 962 (1392)
..
T Consensus 394 ~T 395 (454)
T 3u0b_A 394 ET 395 (454)
T ss_dssp CC
T ss_pred cC
Confidence 53
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.8e-27 Score=322.78 Aligned_cols=293 Identities=16% Similarity=0.168 Sum_probs=220.1
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcccCCCCCCCc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSFENDDKSKPV 1098 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~~~~~~~~~~ 1098 (1392)
+.|+++|+++|++ +.|+.+++||++|+|||+|++|.++|+++||+++++.+| .++|+++|++.+........
T Consensus 975 ~~l~~~~~~vL~~---~~i~~~~~ff~lGg~Sl~a~~l~~~l~~~~g~~l~~~~~~~~~ti~~la~~~~~~~~~~~---- 1047 (1304)
T 2vsq_A 975 ETIAQIWSEVLGR---KQIGIHDDFFALGGHALKAMTAASRIKKELGIDLPVKLLFEAPTIAGISAYLKNGGSDGL---- 1047 (1304)
T ss_dssp HHHHHHHHHHHTC---SCCCTTCCTTTTTCCHHHHHHHHHHSSSTTSCCCCSSCTTTCCSHHHHHHHHHHTTSSST----
T ss_pred HHHHHHHHHHcCC---CccCCCCCHHHhCCChHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHhcCCCcc----
Confidence 4689999999997 679999999999999999999999999999999999999 99999999998865321100
Q ss_pred cccccCCcccccccCCCChhhHHHHHHhhccccccCCcccccCCccCCCCccccCCCCCceeEeecCCCccccccHHHHh
Q psy1119 1099 STEASGGQVTALSVEDIPDVGIQYLMRTIGDEILANKPVIRLPSLKNNGSTVEEPVGNNNTIFMVPGIEGIATVLEPLAK 1178 (1392)
Q Consensus 1099 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~pLF~vp~agG~~~~y~~La~ 1178 (1392)
..++++.. +.++||||+|+++|.+..|.+|+.
T Consensus 1048 ------------------------------------~~~~~~~~------------~~~~~L~~l~~~~g~~~~y~~la~ 1079 (1304)
T 2vsq_A 1048 ------------------------------------QDVTIMNQ------------DQEQIIFAFPPVLGYGLMYQNLSS 1079 (1304)
T ss_dssp ------------------------------------TTSEEECT------------TSCCEEECCCCTTCBGGGGHHHHT
T ss_pred ------------------------------------cccccccc------------ccCCcceeecccccchHHHHHHHh
Confidence 01111111 234789999999999999999999
Q ss_pred hcCCceEEEecCCCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCC
Q psy1119 1179 NINAQVLVFQFDHTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDY 1257 (1392)
Q Consensus 1179 ~L~~~~~v~~l~~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~ 1257 (1392)
+|+ ...+++++. .++++++++|++.|+.. +|+|||+|+||||||.+|||+|++|+++|.++ .++++|++++.
T Consensus 1080 ~L~-~~~v~~l~~----~~~~~~~~~~~~~i~~~--~~~gp~~l~G~S~Gg~lA~e~A~~L~~~g~~v~~l~lld~~~~~ 1152 (1304)
T 2vsq_A 1080 RLP-SYKLCAFDF----IEEEDRLDRYADLIQKL--QPEGPLTLFGYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSYKKQ 1152 (1304)
T ss_dssp TCC-SCEEEECBC----CCSTTHHHHHHHHHHHH--CCSSCEEEEEETTHHHHHHHHHHHHHHSSCCEEEEEEESCCEEC
T ss_pred ccc-ccceEeecc----cCHHHHHHHHHHHHHHh--CCCCCeEEEEecCCchHHHHHHHHHHhCCCceeEEEEecCcccc
Confidence 999 788888864 57889999999999854 48999999999999999999999999999988 78899997643
Q ss_pred CccccCCCCChHHHHHHHHhcCCc-cccCCHHHHHHHHHHHHHHHHhhccccCCCCCcccceEEEEeeCCCCCCChhhcC
Q psy1119 1258 VLTSLRKLPDWNAKLNYFLDLMPE-DATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQALPTAEDYG 1336 (1392)
Q Consensus 1258 ~~~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~~~~~~~~~ 1336 (1392)
...... ........+.+.+.... ...............+++.+.....|... .++++|+++++++++........+
T Consensus 1153 ~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~--~~~~~pv~l~~~~~~~~~~~~~~~ 1229 (1304)
T 2vsq_A 1153 GVSDLD-GRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYSYYVNLIST--GQVKADIDLLTSGADFDIPEWLAS 1229 (1304)
T ss_dssp SCC------CHHHHHHHHHTTCC-------CTTTGGGHHHHHHHHHHHHC-------CBSSEEEEEECSSCCCCCSSEEC
T ss_pred cccccc-cccchhhHHHHHHhhhhhhhhcchhcchHHHHHHHHHHHHHHHHhcc--CCcCCCEEEEEecCccccccchhh
Confidence 211111 11222334444444331 11111122223445555566666666433 379999999999887533345679
Q ss_pred cccccCCCeEEEEEccCccccccChHHHHHHHhhhcccCCC
Q psy1119 1337 LSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDSTDFKT 1377 (1392)
Q Consensus 1337 W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~~~L~~~ 1377 (1392)
|++++.+.++++.++|+|++|++++++..++..+++.|...
T Consensus 1230 W~~~~~~~~~~~~v~G~H~~ml~~~~~~~~a~~l~~~L~~~ 1270 (1304)
T 2vsq_A 1230 WEEATTGVYRMKRGFGTHAEMLQGETLDRNAEILLEFLNTQ 1270 (1304)
T ss_dssp SSTTBSSCCCEEECSSCTTGGGSHHHHHHHHHHHHHHHHCC
T ss_pred HHHHhCCCeEEEEeCCCHHHHCCCHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999989998888887753
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-25 Score=248.33 Aligned_cols=178 Identities=17% Similarity=0.166 Sum_probs=158.1
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+|++|||||++|||+++|+.|+++||+ |++++|+. +..++..++++..|.++.+++|||+|+++++++++++ +
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga~-Vv~~~~~~---~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSI-VVAVELLE---DRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFE 80 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEECCH---HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 57999999999999999999999999997 88899974 3455666778888999999999999999999999998 7
Q ss_pred hcCCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KLGPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+||+||++|||||+.. ..++.+++.|+|+++++.|+.|++++.+++.++|. ..+.||++||+++..|.+++++|+++
T Consensus 81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~as 160 (254)
T 4fn4_A 81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVA 160 (254)
T ss_dssp HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHH
T ss_pred HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHH
Confidence 8999999999999875 47899999999999999999999999999877653 45899999999999999999999999
Q ss_pred HHHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 935 NSIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
|+++.+|++..+.+. ..+-+|..|.+
T Consensus 161 Kaal~~ltr~lA~ela~~gIrVN~V~PG~i 190 (254)
T 4fn4_A 161 KHGLIGLTRSIAAHYGDQGIRAVAVLPGTV 190 (254)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEEeCCC
Confidence 999999999998874 44556666554
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.8e-25 Score=245.92 Aligned_cols=178 Identities=15% Similarity=0.141 Sum_probs=158.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+|++|||||++|||+++|+.|+++||+ |++++|+. +..++..+++++.|.++..++|||+|+++++++++++ +
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga~-Vvi~~~~~---~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGAR-VILNDIRA---TLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDA 82 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEECCSCH---HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 57999999999999999999999999997 88999974 3445566777888999999999999999999999998 7
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC---CCCCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC---PTLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~---~~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
++|+||++|||||+....++.+++.|+|+++++.|+.|++++.+++.+++ ...+.||++||+++..+.++++.|+++
T Consensus 83 ~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~as 162 (255)
T 4g81_D 83 EGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAA 162 (255)
T ss_dssp TTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHH
T ss_pred HCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHH
Confidence 79999999999999999999999999999999999999999999887655 245899999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCC----eEEEEcccc
Q psy1119 935 NSIMERICEARRAEGLP----GLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~Glp----~~ai~~g~~ 960 (1392)
|+++.+|++..+.+..| +-+|..|.+
T Consensus 163 Kaal~~ltr~lA~ela~~gIrVN~V~PG~i 192 (255)
T 4g81_D 163 KGGIKMLTCSMAAEWAQFNIQTNAIGPGYI 192 (255)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeeCCC
Confidence 99999999999887444 455555554
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-24 Score=238.96 Aligned_cols=173 Identities=17% Similarity=0.187 Sum_probs=151.4
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
+|++|||||++|||+++|+.|+++||+ |++++|+.. ..+++.+.+.++..++|||+|+++++++++++ +++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~-V~~~~~~~~-------~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 73 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDK-VCFIDIDEK-------RSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKL 73 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHH-------HHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCCHH-------HHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 589999999999999999999999997 888888731 12334455778899999999999999999998 789
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-CCCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC-PTLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
|+||++|||||+....++.+++.|+|++++++|+.|++++.+++.+++ +..+.+|++||+++..|.++++.|+++|+++
T Consensus 74 g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~asKaal 153 (247)
T 3ged_A 74 QRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGI 153 (247)
T ss_dssp SCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999887765 3458999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCeEEEEccccC
Q psy1119 939 ERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 939 d~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
.+|++..+.+.-|.+.+|.-.+|
T Consensus 154 ~~ltk~lA~ela~~IrVN~I~PG 176 (247)
T 3ged_A 154 VALTHALAMSLGPDVLVNCIAPG 176 (247)
T ss_dssp HHHHHHHHHHHTTTSEEEEEEEC
T ss_pred HHHHHHHHHHHCCCCEEEEEecC
Confidence 99999998885565444444443
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-24 Score=243.49 Aligned_cols=176 Identities=16% Similarity=0.168 Sum_probs=154.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+|++|||||++|||+++|+.|+++||+ |++++|+. +..++.+++ .|.++..++||++|+++++++++++ +
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~-V~i~~r~~---~~l~~~~~~---~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 99 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGAR-VFITGRRK---DVLDAAIAE---IGGGAVGIQADSANLAELDRLYEKVKA 99 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHH---HCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHH---cCCCeEEEEecCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999997 88899984 223333333 3677889999999999999999998 7
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
++|+||++|||||+....++.+++.|+|+++++.|+.|++++.+++.+++.+.+.+|++||+++..|.++++.|+++|++
T Consensus 100 ~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asKaa 179 (273)
T 4fgs_A 100 EAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAA 179 (273)
T ss_dssp HHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHHHH
Confidence 89999999999999999999999999999999999999999999998887777899999999999999999999999999
Q ss_pred HHHHHHHHHHcCCC-eEEEEccccC
Q psy1119 938 MERICEARRAEGLP-GLAVEWGAVG 961 (1392)
Q Consensus 938 ld~la~~r~~~Glp-~~ai~~g~~~ 961 (1392)
+.+|++..+.+..| .+.+|.-.+|
T Consensus 180 v~~ltr~lA~Ela~~gIrVN~V~PG 204 (273)
T 4fgs_A 180 LRSFARNWILDLKDRGIRINTLSPG 204 (273)
T ss_dssp HHHHHHHHHHHTTTSCEEEEEEEEC
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeC
Confidence 99999999888655 3444444443
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=241.69 Aligned_cols=212 Identities=27% Similarity=0.480 Sum_probs=162.5
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC--CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHH
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD--HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVA 1232 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~--~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA 1232 (1392)
+.++||||+|++||++..|.+|++.|. ..++.++ .+++..+++++|+.|++.|+.. ++.+||+|+||||||.||
T Consensus 22 ~~~~~l~~~hg~~~~~~~~~~~~~~L~--~~v~~~d~~~~~~~~~~~~~a~~~~~~i~~~--~~~~~~~l~GhS~Gg~va 97 (283)
T 3tjm_A 22 SSERPLFLVHPIEGSTTVFHSLASRLS--IPTYGLQCTRAAPLDSIHSLAAYYIDCIRQV--QPEGPYRVAGYSYGACVA 97 (283)
T ss_dssp SSSCCEEEECCTTCCSGGGHHHHHHCS--SCEEEECCCTTSCCSCHHHHHHHHHHHHTTT--CCSSCCEEEEETHHHHHH
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHhcC--ceEEEEecCCCCCCCCHHHHHHHHHHHHHHh--CCCCCEEEEEECHhHHHH
Confidence 345899999999999999999999998 5555554 6677889999999999999854 367899999999999999
Q ss_pred HHHHHHHHHcCCcc----EEEEEeCCCCCCcc---------------------------------------ccCCCCChH
Q psy1119 1233 LELAIKLEQLGTKC----HLYLVDSAPDYVLT---------------------------------------SLRKLPDWN 1269 (1392)
Q Consensus 1233 ~EmA~~Le~~G~~v----~LvLiD~~p~~~~~---------------------------------------~l~~~~~~~ 1269 (1392)
+|+|++|++++..+ .|+++|+.|++... .+.....++
T Consensus 98 ~~~a~~~~~~~~~v~~~~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~ 177 (283)
T 3tjm_A 98 FEMCSQLQAQQSPAPTHNSLFLFDGSPTYVLAYTGSYRAKLTPGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLKGLE 177 (283)
T ss_dssp HHHHHHHHHHHTTSCCCCEEEEESCCTTHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHSCCCHHHHHHHHTTSSSHH
T ss_pred HHHHHHHHHcCCCCCccceEEEEcCCchhhhhhhhhhhhccCCCCchHHHHHHHHHHHHHhcccchhHHHHHHhcCCCHH
Confidence 99999998888776 68999998753100 000112222
Q ss_pred HHHHHHHhcCCc-cccCCHHHHHHHHHHHHHHHHhhccccCCCCCcccceEEEEeeCCCCC---CChhhcCcccccCCCe
Q psy1119 1270 AKLNYFLDLMPE-DATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQAL---PTAEDYGLSKVCKKPV 1345 (1392)
Q Consensus 1270 ~~l~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~~---~~~~~~~W~~~~~g~v 1345 (1392)
+.+..+.+.+.. ....+++.++.+.+.+++++++...|+|. .++++|+++++++++.. ..+..++|++++.+.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~--~~~~~Pvl~l~g~~d~~~~~~~~~~~~w~~~~~~~~ 255 (283)
T 3tjm_A 178 ERVAAAVDLIIKSHQGLDRQELSFAARSFYYKLRAAEQYTPK--AKYHGNVMLLRAKTGGAYGEAAGADYNLSQVCDGKV 255 (283)
T ss_dssp HHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHCCCS--SCBCSCEEEEEC--------CCTTTTTGGGTBCSCE
T ss_pred HHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCCC--CCCCCCEEEEecCCccccccccCcccchHhhccCce
Confidence 222222222111 11237788888999999999999999886 48999999999998862 3567789999999999
Q ss_pred EEEEEccCccccccChHHHHHHHhhhc
Q psy1119 1346 KVHFVDGNHFTVLDNIKSAQIIMHEDS 1372 (1392)
Q Consensus 1346 ~v~~v~G~H~~ml~~~~~~~i~~~l~~ 1372 (1392)
+++.++|+|++|+++|++..++..|++
T Consensus 256 ~~~~v~ggH~~~l~~p~~~~va~~i~~ 282 (283)
T 3tjm_A 256 SVHVIEGDHATLLEGSGLESIISIIHS 282 (283)
T ss_dssp EEEECSSCTTGGGSHHHHHHHHHHHHH
T ss_pred EEEEECCCCceeeCCchHHHHHHHHhc
Confidence 999999999999999998888887754
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=255.67 Aligned_cols=172 Identities=19% Similarity=0.274 Sum_probs=146.6
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+|++|||||++|||+++|+.|+++|++ |++.+|+. . +...++++..|.++..+.||++ ++++++++++ +
T Consensus 320 l~gkvalVTGas~GIG~a~A~~la~~Ga~-Vv~~~~~~--~---~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~ 391 (604)
T 2et6_A 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAK-VVVNDFKD--A---TKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVID 391 (604)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEECSSC--C---HHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHH
T ss_pred cCCCeEEEECcchHHHHHHHHHHHHCCCE-EEEEeCcc--H---HHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHH
Confidence 35799999999999999999999999997 77777642 1 2234455556778888889984 4567788887 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||++|||||+..+.+|.+++.++|++++++|+.|++++.+++.+++ ...+.||++||+++..|++++++|+++|
T Consensus 392 ~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asK 471 (604)
T 2et6_A 392 KYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSK 471 (604)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHH
Confidence 79999999999999999999999999999999999999999999887765 3458999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEcc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWG 958 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g 958 (1392)
+++.+|++..+.+ |..+.+|..|
T Consensus 472 aal~~lt~~la~El~~~gIrVn~v~PG 498 (604)
T 2et6_A 472 AGILGLSKTMAIEGAKNNIKVNIVAPH 498 (604)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEcCC
Confidence 9999999998877 4456667666
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.1e-23 Score=230.21 Aligned_cols=172 Identities=15% Similarity=0.093 Sum_probs=148.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
..+|++|||||++|||+++|+.|+++||+ |++++|+.. ++..+++++.|.++..++||++|++++++++ +
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga~-Vvi~~r~~~-----~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~----~ 76 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGAE-VVCAARRAP-----DETLDIIAKDGGNASALLIDFADPLAAKDSF----T 76 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCC-----HHHHHHHHHTTCCEEEEECCTTSTTTTTTSS----T
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCCE-EEEEeCCcH-----HHHHHHHHHhCCcEEEEEccCCCHHHHHHHH----H
Confidence 57999999999999999999999999997 888888753 2334566778999999999999998887655 4
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-C--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC-P--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+++ . ..+.||++||+++..|.+++++|+++|
T Consensus 77 ~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asK 156 (247)
T 4hp8_A 77 DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAK 156 (247)
T ss_dssp TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHH
Confidence 6899999999999999999999999999999999999999999876644 2 358999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCC----CeEEEEcccc
Q psy1119 936 SIMERICEARRAEGL----PGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~Gl----p~~ai~~g~~ 960 (1392)
+++.+|++..+.+.. .+-+|..|.+
T Consensus 157 aav~~ltr~lA~Ela~~gIrVNaV~PG~i 185 (247)
T 4hp8_A 157 HGVAGLTKLLANEWAAKGINVNAIAPGYI 185 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEeeCCC
Confidence 999999999887744 3455555554
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=230.50 Aligned_cols=218 Identities=15% Similarity=0.169 Sum_probs=168.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+. +..+...++++..|.++.++.||++|+++++++++++ ++
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 78 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAK-ILLGARRQ---ARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDT 78 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESSH---HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 88889884 2344455667777889999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++|+
T Consensus 79 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 158 (264)
T 3tfo_A 79 WGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKF 158 (264)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHH
Confidence 99999999999999999999999999999999999999999998866542 4589999999999999999999999999
Q ss_pred HHHHHHHHHHHcC--CCeEEEEccccCccccccchhhhhH--HHHHcCccccchhhhHHHHHHHHccCCC
Q psy1119 937 IMERICEARRAEG--LPGLAVEWGAVGEVGLVADMAEDNL--EVVIGGTLQQRISNCLECLNEFLIQSEP 1002 (1392)
Q Consensus 937 ~ld~la~~r~~~G--lp~~ai~~g~~~~~G~~~~~~~~~~--~~~~~g~~~~~~~~~l~~l~~~l~~~~~ 1002 (1392)
++++|++..+.+. ..+.+|..|.+. +.+......... ........+..++++.+.+..+++.+..
T Consensus 159 al~~l~~~la~e~~gIrvn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~ 227 (264)
T 3tfo_A 159 AVRAISDGLRQESTNIRVTCVNPGVVE-SELAGTITHEETMAAMDTYRAIALQPADIARAVRQVIEAPQS 227 (264)
T ss_dssp HHHHHHHHHHHHCSSEEEEEEEECCC------------------------CCCHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHhCCCCEEEEEecCCCc-CcccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCCcc
Confidence 9999999998884 344455555442 222211111000 0000111234667777777777665544
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.6e-23 Score=232.08 Aligned_cols=177 Identities=19% Similarity=0.164 Sum_probs=152.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+|++|||||++|||+++|+.|+++||+ |++++|+..... ..+++.+.|.++.+++|||+|+++++++++++ +
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga~-Vv~~~r~~~~~~----~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~ 79 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERAI-PVVFARHAPDGA----FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIA 79 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCCCHH----HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEECCcccHH----HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 888888865422 23445556788999999999999999999998 7
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+||+||++|||||+.... ..+++.|+|+++++.|+.|++++.+++.++++ ..+.||++||+++..|.++++.|+++|+
T Consensus 80 ~~G~iDiLVNnAGi~~~~-~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asKa 158 (258)
T 4gkb_A 80 TFGRLDGLVNNAGVNDGI-GLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCASKG 158 (258)
T ss_dssp HHSCCCEEEECCCCCCCC-CTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSCHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCC-CccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCchHHHHHHH
Confidence 899999999999986544 45889999999999999999999998877653 3589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++.+|++..+.+ |..+-+|..|.+.
T Consensus 159 av~~ltr~lA~ela~~gIrVN~V~PG~i~ 187 (258)
T 4gkb_A 159 AQLALTREWAVALREHGVRVNAVIPAEVM 187 (258)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred HHHHHHHHHHHHhcccCeEEEEEecCCCC
Confidence 999999998876 5556677777653
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-22 Score=228.51 Aligned_cols=180 Identities=18% Similarity=0.168 Sum_probs=156.2
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++.++...|+. ...+...++++..|.++.++.||++|+++++++++++ +
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 101 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKA---AAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEE 101 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCS---HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCH---HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999998444335543 3344455566777889999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
++|+||++|||||+....++.+.+.++|++++++|+.|++++.+++.+.+.+.+.||++||.++..+.++++.|+++|++
T Consensus 102 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 181 (267)
T 3u5t_A 102 AFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAG 181 (267)
T ss_dssp HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHHHHHHH
Confidence 79999999999999999999999999999999999999999999887766556899999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++|++..+.+ |..+.+|..|.+.
T Consensus 182 ~~~l~~~la~e~~~~gI~vn~v~PG~v~ 209 (267)
T 3u5t_A 182 VEAMTHVLSKELRGRDITVNAVAPGPTA 209 (267)
T ss_dssp HHHHHHHHHHHTTTSCCEEEEEEECCBC
T ss_pred HHHHHHHHHHHhhhhCCEEEEEEECCCc
Confidence 99999998887 5667788887764
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.89 E-value=5e-22 Score=224.90 Aligned_cols=178 Identities=16% Similarity=0.157 Sum_probs=156.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+. +..+...++++..|.++.++.||++|+++++++++++ +
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 85 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGAS-VVVTDLKS---EGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALD 85 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTCE-EEEEESSH---HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCH---HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 88888874 3344455666777889999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||++|||||+....++ +++.++|++++++|+.|++++.+++.+++. ..+.||++||+++..+.++++.|+++|
T Consensus 86 ~~g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 164 (256)
T 3gaf_A 86 QFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSK 164 (256)
T ss_dssp HHSCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHH
Confidence 79999999999999888888 999999999999999999999998866552 457999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |..+.+|..|.+.
T Consensus 165 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~ 194 (256)
T 3gaf_A 165 AAVNHLTRNIAFDVGPMGIRVNAIAPGAIK 194 (256)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHhhhCcEEEEEEEcccc
Confidence 9999999988776 6667777777654
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=6.3e-22 Score=224.89 Aligned_cols=180 Identities=22% Similarity=0.247 Sum_probs=158.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCC-ceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYD-VQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G-~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+. +..+...++++..| .++.++.||++|+++++++++++
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGAN-VAVAGRST---ADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCH---HHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999996 88889984 23344555666666 68999999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccc-cCCCCChhHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCG-RGNAGQTNYGM 933 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~-~G~~gq~~Yaa 933 (1392)
+++|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++. .+.++++.|++
T Consensus 84 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~a 163 (262)
T 3pk0_A 84 EEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGA 163 (262)
T ss_dssp HHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHH
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHH
Confidence 7799999999999999999999999999999999999999999998876542 45899999999996 88999999999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
+|+++++|++..+.+ |..+.+|..|.+..
T Consensus 164 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t 196 (262)
T 3pk0_A 164 TKAAQLGFMRTAAIELAPHKITVNAIMPGNIMT 196 (262)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCC
T ss_pred HHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcC
Confidence 999999999988776 78888898887754
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-22 Score=221.91 Aligned_cols=167 Identities=17% Similarity=0.169 Sum_probs=143.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
.++|++|||||++|||+++|+.|+++||+ |++++|+..... +..+.++..++|||+|+++++++++ +
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~-Vv~~~~~~~~~~---------~~~~~~~~~~~~Dv~~~~~v~~~~~---~ 75 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAE-VVALGLDADGVH---------APRHPRIRREELDITDSQRLQRLFE---A 75 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSTTSTT---------SCCCTTEEEEECCTTCHHHHHHHHH---H
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHh---------hhhcCCeEEEEecCCCHHHHHHHHH---h
Confidence 37899999999999999999999999997 888899853321 2345678899999999999998875 5
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+|+||++|||||+.. ++.+++.++|++++++|+.|++++.+++.+++. ..+.||++||+++..|.++++.|+++|++
T Consensus 76 ~g~iDiLVNNAGi~~--~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asKaa 153 (242)
T 4b79_A 76 LPRLDVLVNNAGISR--DREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGA 153 (242)
T ss_dssp CSCCSEEEECCCCCC--GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHHHHHHHHH
Confidence 899999999999864 678999999999999999999999998877764 45899999999999999999999999999
Q ss_pred HHHHHHHHHHcCC----CeEEEEcccc
Q psy1119 938 MERICEARRAEGL----PGLAVEWGAV 960 (1392)
Q Consensus 938 ld~la~~r~~~Gl----p~~ai~~g~~ 960 (1392)
+.+|++..+.+.. .+-+|..|.+
T Consensus 154 v~~ltr~lA~Ela~~gIrVNaV~PG~i 180 (242)
T 4b79_A 154 IVQLTRSLACEYAAERIRVNAIAPGWI 180 (242)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHhhhcCeEEEEEEeCCC
Confidence 9999999988744 4455555554
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.4e-22 Score=224.17 Aligned_cols=180 Identities=18% Similarity=0.206 Sum_probs=159.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+. +..++..++++..|.++.++.||++|+++++++++++ ++
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGAR-VVITGRTK---EKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCH---HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 88889984 3344455667778889999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC---CCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC---PTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~---~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+.+ ...+.||++||+++..+.++++.|+++|
T Consensus 81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 160 (257)
T 3imf_A 81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAK 160 (257)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHH
Confidence 9999999999999999999999999999999999999999999886654 2358999999999999999999999999
Q ss_pred HHHHHHHHHHHH-----cCCCeEEEEccccCcc
Q psy1119 936 SIMERICEARRA-----EGLPGLAVEWGAVGEV 963 (1392)
Q Consensus 936 a~ld~la~~r~~-----~Glp~~ai~~g~~~~~ 963 (1392)
+++++|++..+. .|..+.+|..|.+...
T Consensus 161 aa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~ 193 (257)
T 3imf_A 161 AGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERT 193 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSC
T ss_pred HHHHHHHHHHHHHhccccCeEEEEEEECCCcCC
Confidence 999999998764 3788899999887543
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.7e-22 Score=224.74 Aligned_cols=179 Identities=18% Similarity=0.175 Sum_probs=156.5
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++.+++.+|+. +..++..++++..|.++.++.||++|+++++++++++ ++
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSK---KAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDET 79 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCH---HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCH---HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999998444458874 3344555667778889999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+++. ..+.||++||+++..+.++++.|+++|+
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 159 (258)
T 3oid_A 80 FGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKA 159 (258)
T ss_dssp HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHH
Confidence 99999999999998889999999999999999999999999998866553 3479999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |..+.+|..|.+.
T Consensus 160 a~~~l~~~la~e~~~~gi~vn~v~PG~v~ 188 (258)
T 3oid_A 160 ALEALTRYLAVELSPKQIIVNAVSGGAID 188 (258)
T ss_dssp HHHHHHHHHHHHTGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEeeCCCc
Confidence 999999998876 5666777777664
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.2e-23 Score=233.19 Aligned_cols=182 Identities=18% Similarity=0.185 Sum_probs=157.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||++|||+++|+.|+++|++ |++++|+....+..++..++++..|.++.+++||++|+++++++++++ +
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESVN-LVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSCE-EEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 777777655555566667778888999999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
++|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+.+.+.+.||++||.++..+.++++.|+++|++
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 167 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAP 167 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC-----CH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCchhHHHHHH
Confidence 79999999999999999999999999999999999999999999987766566899999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++|++..+.+ |..+.+|..|.+.
T Consensus 168 ~~~l~~~la~e~~~~gi~vn~v~PG~v~ 195 (262)
T 3ksu_A 168 VEHYTRAASKELMKQQISVNAIAPGPMD 195 (262)
T ss_dssp HHHHHHHHHHHTTTTTCEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCcEEEEEeeCCCc
Confidence 99999998877 5667777777663
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.5e-22 Score=227.86 Aligned_cols=180 Identities=20% Similarity=0.274 Sum_probs=158.0
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|+.|+++|++ |+++.|+. .+..+...++++..|.++.++.||++|.++++++++++ +
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~-V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~ 102 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAK-VAVNYASS--AGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE 102 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSC--HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCC--hHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999998 66666642 23344455666777889999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+ ...+.||++||+++..+.++++.|+++|
T Consensus 103 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 182 (269)
T 4dmm_A 103 RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAK 182 (269)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHH
Confidence 79999999999999999999999999999999999999999999886654 2458999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |+.+.+|..|.+.
T Consensus 183 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~ 212 (269)
T 4dmm_A 183 AGVIGLTKTVAKELASRGITVNAVAPGFIA 212 (269)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBT
T ss_pred HHHHHHHHHHHHHHhhhCcEEEEEEECCCc
Confidence 9999999988765 7888899988774
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.89 E-value=5.8e-22 Score=226.23 Aligned_cols=181 Identities=18% Similarity=0.195 Sum_probs=159.0
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|+.|+++|++ |+++.|+. .+..+...++++..|.++.++.||++|+++++++++++ +
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAA-VALTYVNA--AERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVE 105 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSC--HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCC--HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999998 66665543 23344456667777889999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccC-CCCChhHHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRG-NAGQTNYGMANS 936 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G-~~gq~~Yaaana 936 (1392)
++|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+.+.+.+.||++||.++..+ .++++.|+++|+
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKa 185 (271)
T 3v2g_A 106 ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKA 185 (271)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHHHHHHHH
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchHHHHHHH
Confidence 7999999999999999999999999999999999999999999999887777789999999888776 799999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
++++|++..+.+ |..+.+|..|.+..
T Consensus 186 a~~~l~~~la~e~~~~gIrvn~v~PG~v~T 215 (271)
T 3v2g_A 186 ALAGLTKGLARDLGPRGITVNIVHPGSTDT 215 (271)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCS
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEecCCCcC
Confidence 999999988766 78888888887743
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.5e-22 Score=217.01 Aligned_cols=196 Identities=36% Similarity=0.590 Sum_probs=152.3
Q ss_pred cceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q psy1119 529 EMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRK 608 (1392)
Q Consensus 529 ~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~ 608 (1392)
+.++++|+++|+++||+++++++|||+++...+++++|++|||+||+||+|++++|+++..|++|+++++++++.+.+++
T Consensus 2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~ 81 (198)
T 1pqw_A 2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR 81 (198)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT
T ss_pred CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 46789999999999999999999999999888899999999999999999999999999999999999999988888865
Q ss_pred HCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcE
Q psy1119 609 TFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETS 688 (1392)
Q Consensus 609 ~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s 688 (1392)
++.++++|.++.++.+.+.+.+.++|+|+++|+.+++.++.++++++++|+++.+|.........+.+..+.++++
T Consensus 82 ----~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 157 (198)
T 1pqw_A 82 ----LGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSAS 157 (198)
T ss_dssp ----TCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCE
T ss_pred ----cCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcCcCcCChhHhcCCcE
Confidence 5778888988888888999988877999999999988899999999999999999976432222334455678999
Q ss_pred EEEEechhhhhh-CHHHHHHHHHHHHHHHHcCCCCCcceeee
Q psy1119 689 FHGVMLDNFFFA-EQEWKMSLQKALQKAIDAGAVQPLVRTIF 729 (1392)
Q Consensus 689 ~~g~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~l~pl~~~vf 729 (1392)
+.++.+ .+... .+......++.+.+++++|+++|.+.++|
T Consensus 158 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~ 198 (198)
T 1pqw_A 158 FSVVDL-DLNLKLQPARYRQLLQHILQHVADGKLEVLPVTAF 198 (198)
T ss_dssp EEECCH-HHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC--
T ss_pred EEEEeh-HHhhccCHHHHHHHHHHHHHHHHcCCccCCCCCcC
Confidence 998765 22222 34334556677788999999999776554
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-22 Score=228.44 Aligned_cols=179 Identities=20% Similarity=0.213 Sum_probs=156.7
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+.. ..++..++++..|.++..+.||++|.++++++++++ +
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGAM-VIGTATTEA---GAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLK 101 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSHH---HHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999996 888888742 334445556666888899999999999999999998 7
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+ ...+.||++||+++..+.++++.|+++|
T Consensus 102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 181 (270)
T 3ftp_A 102 EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAK 181 (270)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHH
Confidence 79999999999999999999999999999999999999999999886544 2458999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |..+.+|..|.+.
T Consensus 182 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 211 (270)
T 3ftp_A 182 AGVAGMTRALAREIGSRGITVNCVAPGFID 211 (270)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEEeCCCc
Confidence 9999999988776 6777788777663
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.8e-22 Score=227.49 Aligned_cols=220 Identities=15% Similarity=0.115 Sum_probs=174.0
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCc--eEEEecCCCcccHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGAR--KLVLTSRSGVKNGYQALRIKIWKS--YDVQVLISTDDITTEAGVVNLLT 854 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr--~lvl~sRs~~~~~~~~~~~~~l~~--~G~~v~~~~~Dv~~~~~v~~l~~ 854 (1392)
..++++|||||+||||+++|+.|+++|+. +|++++|+... .++..++++. .|.++.++.||++|+++++++++
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 107 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEK---LEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE 107 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHH---HHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHH---HHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence 36899999999999999999999999983 58999998532 3333444443 37889999999999999999999
Q ss_pred HH-hhcCCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChh
Q psy1119 855 EA-NKLGPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTN 930 (1392)
Q Consensus 855 ~~-~~~g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~ 930 (1392)
++ +++|+||+||||||+.. ..++.+++.++|++++++|+.|++++.+++.+.+ ...+.||++||+++..+.++++.
T Consensus 108 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~ 187 (287)
T 3rku_A 108 NLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSI 187 (287)
T ss_dssp TSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHH
T ss_pred HHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCch
Confidence 98 77999999999999875 6789999999999999999999999999886654 24589999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHc----CCCeEEEEccccCccccccch-h--hhhHHHHHcCccccchhhhHHHHHHHHccCCC
Q psy1119 931 YGMANSIMERICEARRAE----GLPGLAVEWGAVGEVGLVADM-A--EDNLEVVIGGTLQQRISNCLECLNEFLIQSEP 1002 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~~~G~~~~~-~--~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~~ 1002 (1392)
|+++|+++++|++..+.+ |..+.+|..|.+.. .+.... . ............+..++++.+.+..+++....
T Consensus 188 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~~~~p~~pedvA~~v~~l~s~~~~ 265 (287)
T 3rku_A 188 YCASKFAVGAFTDSLRKELINTKIRVILIAPGLVET-EFSLVRYRGNEEQAKNVYKDTTPLMADDVADLIVYATSRKQN 265 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEES-SHHHHHTTTCHHHHHHHHTTSCCEEHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcC-ccccccccCcHHHHHHhhcccCCCCHHHHHHHHHHHhCCCCC
Confidence 999999999999998876 66778888877643 222110 0 01111122334456777887777777665544
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.4e-22 Score=227.88 Aligned_cols=182 Identities=19% Similarity=0.194 Sum_probs=159.7
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcc---------cHHHHHHHHHHhcCCceEEEEeccCCCHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVK---------NGYQALRIKIWKSYDVQVLISTDDITTEAGV 849 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~---------~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v 849 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+... .+......+.++..|.++.+++||++|++++
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAGAD-IAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL 86 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 46899999999999999999999999997 8888887321 2334455566677788999999999999999
Q ss_pred HHHHHHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCC
Q psy1119 850 VNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNA 926 (1392)
Q Consensus 850 ~~l~~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~ 926 (1392)
+++++++ +++|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+.+ ...+.||++||+++..+.+
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 166 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANF 166 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCT
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCC
Confidence 9999998 679999999999999999999999999999999999999999999886644 2458999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 927 GQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 927 gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++.|+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 167 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~ 205 (281)
T 3s55_A 167 AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIE 205 (281)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBC
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence 9999999999999999998876 6677788887763
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=4e-22 Score=228.42 Aligned_cols=182 Identities=17% Similarity=0.171 Sum_probs=158.5
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCc----------ccHHHHHHHHHHhcCCceEEEEeccCCCHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGV----------KNGYQALRIKIWKSYDVQVLISTDDITTEAG 848 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~----------~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~ 848 (1392)
..++++|||||++|||+++|+.|+++|++ |++++|++. ..+..++..+.++..|.++.++.||++|.++
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGAD-IIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR 87 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 36799999999999999999999999997 777777421 2344455566677778899999999999999
Q ss_pred HHHHHHHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccC
Q psy1119 849 VVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRG 924 (1392)
Q Consensus 849 v~~l~~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G 924 (1392)
++++++++ +++|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 167 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM 167 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC
Confidence 99999998 6799999999999999999999999999999999999999999998766542 2479999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 925 NAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 925 ~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
.++++.|+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 168 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~ 208 (277)
T 3tsc_A 168 QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVN 208 (277)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCc
Confidence 999999999999999999988876 6677778777663
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=7.7e-22 Score=221.99 Aligned_cols=179 Identities=18% Similarity=0.238 Sum_probs=155.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |+++.|+. .+..+...++++..|.++.+++||++|.++++++++++ ++
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~-V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYN-VAVNYAGS--KEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ 79 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSC--HHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCC--HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999998 55555542 23344455667777889999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|+||++|||||+....++.+++.++|++.+++|+.|++++.+++.+++ ...+.||++||+++..+.++++.|+++|+
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 159 (246)
T 3osu_A 80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKA 159 (246)
T ss_dssp HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHH
Confidence 9999999999999999999999999999999999999999999886544 24589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |.++.+|..|.+.
T Consensus 160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~ 188 (246)
T 3osu_A 160 GVIGLTKSAARELASRGITVNAVAPGFIV 188 (246)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBG
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEECCCc
Confidence 999999987764 6777788877664
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-21 Score=222.74 Aligned_cols=180 Identities=16% Similarity=0.164 Sum_probs=158.3
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||++|||+++|++|+++|++ |+++.|+. .+..+...++++..|.++.++.||++|+++++++++++ +
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~~-V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGAK-VVVNYANS--TKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVA 92 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTCE-EEEEESSC--HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCC--HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999998 55555442 23344556667778889999999999999999999998 7
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccc-cccCCCCChhHHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVS-CGRGNAGQTNYGMANS 936 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s-~~~G~~gq~~Yaaana 936 (1392)
++|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+++.+.+.||++||.+ +..+.++++.|+++|+
T Consensus 93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKa 172 (270)
T 3is3_A 93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKG 172 (270)
T ss_dssp HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTCHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCCchhHHHHH
Confidence 799999999999999999999999999999999999999999999988777778999999998 5678999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |....+|..|.+.
T Consensus 173 a~~~~~~~la~e~~~~gi~vn~v~PG~v~ 201 (270)
T 3is3_A 173 AVDSFVRIFSKDCGDKKITVNAVAPGGTV 201 (270)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeCCcc
Confidence 999999988776 7778888888764
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=8.3e-22 Score=221.89 Aligned_cols=179 Identities=18% Similarity=0.197 Sum_probs=156.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+. +..+...++++..|.++.++.||++|+++++++++++ ++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~-V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAA-VAIAARRV---EKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEA 81 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 88888874 2233445556666888999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..++||++||+++..+.++++.|+++|++
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 161 (247)
T 2jah_A 82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFG 161 (247)
T ss_dssp HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCCCCcHHHHHHHH
Confidence 89999999999998888999999999999999999999999998866542 12899999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
+++|++..+.+ |+.+.+|..|.+..
T Consensus 162 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T 190 (247)
T 2jah_A 162 VNAFSETLRQEVTERGVRVVVIEPGTTDT 190 (247)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBSS
T ss_pred HHHHHHHHHHHhcccCcEEEEEECCCCCC
Confidence 99999887654 88889999887743
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=226.68 Aligned_cols=180 Identities=15% Similarity=0.158 Sum_probs=158.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+.. ...+...+.++..|.++.++.||++|+++++++++++ +
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~~-V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 121 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGAN-IAIAYLDEE--GDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVR 121 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCH--HHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCch--HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999997 888888742 2233444556677889999999999999999999998 6
Q ss_pred hcCCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++|+||++|||||+.. ...+.+++.++|++++++|+.|++++.+++.+++.+.+.||++||+++..+.++++.|+++|+
T Consensus 122 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 201 (291)
T 3ijr_A 122 QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKG 201 (291)
T ss_dssp HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHHHHH
Confidence 7999999999999864 467999999999999999999999999999887767789999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |..+.+|..|.+.
T Consensus 202 a~~~l~~~la~e~~~~gi~vn~v~PG~v~ 230 (291)
T 3ijr_A 202 AIVAFTRSLSQSLVQKGIRVNGVAPGPIW 230 (291)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHhhcCEEEEEEeeCCCc
Confidence 999999988776 7888888888764
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.5e-22 Score=227.66 Aligned_cols=183 Identities=17% Similarity=0.158 Sum_probs=159.5
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCc----------ccHHHHHHHHHHhcCCceEEEEeccCCCHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGV----------KNGYQALRIKIWKSYDVQVLISTDDITTEAG 848 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~----------~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~ 848 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+.. ..+..++..++++..|.++.++.||++|+++
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGAD-IIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA 91 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 46899999999999999999999999997 777777421 2334445566677788999999999999999
Q ss_pred HHHHHHHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccC
Q psy1119 849 VVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRG 924 (1392)
Q Consensus 849 v~~l~~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G 924 (1392)
++++++++ +++|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+++. ..+.||++||+++..+
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 171 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA 171 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC
Confidence 99999998 6799999999999999999999999999999999999999999998866542 2578999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 925 NAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 925 ~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
.++++.|+++|+++++|++..+.+ |..+.+|..|.+..
T Consensus 172 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t 213 (280)
T 3pgx_A 172 TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVET 213 (280)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccC
Confidence 999999999999999999988775 77778888877643
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=225.73 Aligned_cols=181 Identities=19% Similarity=0.141 Sum_probs=157.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccH----HHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNG----YQALRIKIWKSYDVQVLISTDDITTEAGVVNLLT 854 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~----~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~ 854 (1392)
..++++|||||++|||+++|++|+++|++ |++++|+....+ ..++..++++..|.++.+++||++|+++++++++
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 85 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGAN-VALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVA 85 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCE-EEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 36799999999999999999999999996 888999864311 1233445566668899999999999999999999
Q ss_pred HH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCC-CCChh
Q psy1119 855 EA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGN-AGQTN 930 (1392)
Q Consensus 855 ~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~-~gq~~ 930 (1392)
++ +++|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+++. ..++||++||.++..+. ++++.
T Consensus 86 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~ 165 (285)
T 3sc4_A 86 KTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTP 165 (285)
T ss_dssp HHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSHH
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCch
Confidence 98 6799999999999999999999999999999999999999999999877764 34799999999999886 89999
Q ss_pred HHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 931 YGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
|+++|+++++|++..+.+ |..+.+|..|.+
T Consensus 166 Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~ 199 (285)
T 3sc4_A 166 YMMAKYGMTLCALGIAEELRDAGIASNTLWPRTT 199 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSC
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCc
Confidence 999999999999988775 677788888743
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.9e-22 Score=227.26 Aligned_cols=179 Identities=17% Similarity=0.134 Sum_probs=155.1
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
+..++++|||||+||||+++|++|+++|++ |++++|+. +..+...++++..|.++.++.||++|.++++++++++
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIA-VYGCARDA---KNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAV 96 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCH---HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999997 88889874 3344556677778889999999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhh--C--CCCCeEEEecccccccCCCCChhHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTM--C--PTLGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~--~--~~l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
+++|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+. + ...+.||++||+++..+.++++.|+
T Consensus 97 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~ 176 (279)
T 3sju_A 97 ERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYT 176 (279)
T ss_dssp HHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHH
Confidence 67999999999999999999999999999999999999999999987652 2 2447999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++|+++++|++..+.+ |..+.+|..|.+
T Consensus 177 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v 208 (279)
T 3sju_A 177 ASKHGVVGFTKSVGFELAKTGITVNAVCPGYV 208 (279)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTEEEEEEEESSB
T ss_pred HHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcc
Confidence 9999999999988876 556667777665
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=221.90 Aligned_cols=176 Identities=15% Similarity=0.105 Sum_probs=152.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+..... ...++++..|.++.++.||++|+++++++++++ +.
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFT-VFAGRRNGEKLA---PLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCE-EEEEESSGGGGH---HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHH---HHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 5789999999999999999999999997 888999864433 344556667889999999999999999999998 56
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++|+
T Consensus 82 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 160 (252)
T 3h7a_A 82 -APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKF 160 (252)
T ss_dssp -SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHH
T ss_pred -CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHH
Confidence 9999999999999999999999999999999999999999998866542 3579999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCe-EEEEcccc
Q psy1119 937 IMERICEARRAE----GLPG-LAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~-~ai~~g~~ 960 (1392)
++++|++..+.+ |..+ .+|..|.+
T Consensus 161 a~~~l~~~la~e~~~~gi~v~n~v~PG~v 189 (252)
T 3h7a_A 161 GLRAVAQSMARELMPKNIHVAHLIIDSGV 189 (252)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEEC---
T ss_pred HHHHHHHHHHHHhhhcCCEEEEEecCCcc
Confidence 999999988776 4555 56666655
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=6.3e-22 Score=223.95 Aligned_cols=182 Identities=21% Similarity=0.288 Sum_probs=153.8
Q ss_pred cccCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEec-CCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHH
Q psy1119 776 YYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTS-RSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLT 854 (1392)
Q Consensus 776 ~~~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~s-Rs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~ 854 (1392)
....+++++|||||+||||+++|++|+++|++ |++++ |+... .....++++..+.++.++.||++|.++++++++
T Consensus 8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~-v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 83 (256)
T 3ezl_A 8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFR-VVAGCGPNSPR---RVKWLEDQKALGFDFYASEGNVGDWDSTKQAFD 83 (256)
T ss_dssp -----CEEEEETTTTSHHHHHHHHHHHHTTEE-EEEEECTTCSS---HHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCCHHH---HHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHH
Confidence 34568899999999999999999999999998 55554 55433 233445566678889999999999999999999
Q ss_pred HH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhH
Q psy1119 855 EA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 855 ~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
++ +++|+||+||||||+.....+.+++.++|++++++|+.|++++.+++.+.+. ..++||++||.++..+.++++.|
T Consensus 84 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 163 (256)
T 3ezl_A 84 KVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNY 163 (256)
T ss_dssp HHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHH
T ss_pred HHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCccc
Confidence 98 6799999999999999999999999999999999999999999988766542 44799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 932 GMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 932 aaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 164 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 197 (256)
T 3ezl_A 164 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIG 197 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCEEEEEEECccc
Confidence 99999999999987765 6777888887764
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.5e-22 Score=226.47 Aligned_cols=179 Identities=16% Similarity=0.203 Sum_probs=158.5
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+. +..++..++++..|.++.++.||++|+++++++++++ +
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~~-V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGAR-ILINGTDP---SRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE 99 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEECCSCH---HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCH---HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 88888874 3344556667778889999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++|
T Consensus 100 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK 179 (271)
T 4ibo_A 100 QGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAK 179 (271)
T ss_dssp HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHH
Confidence 799999999999999999999999999999999999999999988766542 347999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |..+.+|..|.+.
T Consensus 180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 209 (271)
T 4ibo_A 180 GGIKMLTRAMAAEWAQYGIQANAIGPGYML 209 (271)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEEeccEe
Confidence 9999999988765 6777788777664
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6e-22 Score=223.06 Aligned_cols=176 Identities=16% Similarity=0.185 Sum_probs=153.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.. ..++..+++ |.++..+.||++|+++++++++++ +.
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~-V~~~~r~~~---~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGAT-VIVSDINAE---GAKAAAASI---GKKARAIAADISDPGSVKALFAEIQAL 77 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEECSCHH---HHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999999997 888888742 222233333 678899999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+++. ..++||++||.++..+.++++.|+++|
T Consensus 78 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 157 (247)
T 3rwb_A 78 TGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAK 157 (247)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHH
Confidence 99999999999999999999999999999999999999999998766542 258999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
+++++|++..+.+ |..+.+|..|.+..
T Consensus 158 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t 188 (247)
T 3rwb_A 158 GGVIGFTRALATELGKYNITANAVTPGLIES 188 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcC
Confidence 9999999988776 67778888887654
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.88 E-value=5.5e-22 Score=224.43 Aligned_cols=175 Identities=22% Similarity=0.255 Sum_probs=155.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+|++|||||+||||+++|+.|+++|++ |++++|+.. ..++..+++ |.++.++.||++|+++++++++++ +.
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~-V~~~~r~~~---~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAE-VLLTGRNES---NIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999999996 888899742 222223332 668899999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
+|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+++.+.+.||++||+++..+.++++.|+++|+++
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 159 (255)
T 4eso_A 80 LGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAAL 159 (255)
T ss_dssp HSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999887765668999999999999999999999999999
Q ss_pred HHHHHHHHHc----CCCeEEEEccccC
Q psy1119 939 ERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 939 d~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++|++..+.+ |..+.+|..|.+.
T Consensus 160 ~~~~~~la~e~~~~gi~vn~v~PG~v~ 186 (255)
T 4eso_A 160 VSFASVLAAELLPRGIRVNSVSPGFID 186 (255)
T ss_dssp HHHHHHHHHHTGGGTCEEEEEEECSBC
T ss_pred HHHHHHHHHHHhhhCcEEEEEecCccc
Confidence 9999988877 6778888888764
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-21 Score=220.47 Aligned_cols=178 Identities=17% Similarity=0.231 Sum_probs=152.0
Q ss_pred CCCCeEEEEcCcc--hHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC-CceEEEEeccCCCHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLG--GFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY-DVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 779 ~~~~~ylItGG~g--GiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~-G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
..+|++||||++| |||+++|+.|+++||+ |++++|+....++ ..+++++. +.++.+++|||++++++++++++
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~-Vvi~~r~~~~~~~---~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGAK-LVFTYRKERSRKE---LEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTCE-EEEEESSGGGHHH---HHHHHGGGTCSSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHH---HHHHHHhcCCCcEEEEEccCCCHHHHHHHHHH
Confidence 4689999999876 9999999999999997 8889998543333 33444443 45788999999999999999999
Q ss_pred H-hhcCCccEEEECcccCCC----ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChh
Q psy1119 856 A-NKLGPVDGIFNLAVVLKD----ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTN 930 (1392)
Q Consensus 856 ~-~~~g~I~gvi~~Agv~~d----~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~ 930 (1392)
+ +++|+||++|||||+... ..+.+.+.++|..+++.++.+++.+.+...+++++.+.||++||+++..+.++++.
T Consensus 80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~ 159 (256)
T 4fs3_A 80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNV 159 (256)
T ss_dssp HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHH
T ss_pred HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchh
Confidence 8 779999999999998643 45788999999999999999999999888777777899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 931 YGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
|+++|+++.+|++..+.+ |..+-+|..|.+
T Consensus 160 Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i 193 (256)
T 4fs3_A 160 MGVAKASLEANVKYLALDLGPDNIRVNAISAGPI 193 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC
T ss_pred hHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCC
Confidence 999999999999998877 444556666655
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-21 Score=225.16 Aligned_cols=180 Identities=19% Similarity=0.239 Sum_probs=157.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCC-ceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYD-VQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G-~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+.... +...++++..| .++.++.||++|+++++++++++
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~---~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGAN-VAVAARSPREL---SSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVV 114 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSGGGG---HHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHH---HHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999996 88889985443 33455666666 68999999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccc-cCCCCChhHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCG-RGNAGQTNYGM 933 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~-~G~~gq~~Yaa 933 (1392)
+++|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++. .|.++++.|++
T Consensus 115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~a 194 (293)
T 3rih_A 115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGA 194 (293)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHH
Confidence 7799999999999999999999999999999999999999999998754432 45899999999996 89999999999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
+|+++++|++..+.+ |+.+.+|..|.+..
T Consensus 195 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t 227 (293)
T 3rih_A 195 SKAAQLGFMRTAAIELAPRGVTVNAILPGNILT 227 (293)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCC
T ss_pred HHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcC
Confidence 999999999987765 78888999887754
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-21 Score=226.96 Aligned_cols=182 Identities=16% Similarity=0.146 Sum_probs=157.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCc---------ccHHHHHHHHHHhcCCceEEEEeccCCCHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGV---------KNGYQALRIKIWKSYDVQVLISTDDITTEAGV 849 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~---------~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v 849 (1392)
..++++|||||++|||+++|+.|+++|++ |++++|+.. ..+..++..++++..|.++.+++||++|++++
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGAD-IIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM 104 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 46899999999999999999999999998 777777632 12334455666777889999999999999999
Q ss_pred HHHHHHH-hhcCCccEEEECcccCCCcc-ccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC---CCCCeEEEecccccccC
Q psy1119 850 VNLLTEA-NKLGPVDGIFNLAVVLKDAL-FENQTPEDFNASLGPKANATKYFDKYSRTMC---PTLGQFVVFSSVSCGRG 924 (1392)
Q Consensus 850 ~~l~~~~-~~~g~I~gvi~~Agv~~d~~-~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~---~~l~~fV~~SS~s~~~G 924 (1392)
+++++++ +++|+||++|||||+..... +.+++.++|++++++|+.|++++.+++.+.+ ...+.||++||+++..+
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~ 184 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG 184 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC
Confidence 9999998 67999999999999987765 9999999999999999999999999886653 23579999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 925 NAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 925 ~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
.++++.|+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 185 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 225 (299)
T 3t7c_A 185 AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVA 225 (299)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBS
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcc
Confidence 999999999999999999988876 6667778777664
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-21 Score=225.65 Aligned_cols=182 Identities=14% Similarity=0.151 Sum_probs=159.1
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+... ...+...+.++..|.++.++.||++|+++++++++++ +
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGAD-VAINYLPAEE-EDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEECCGGGH-HHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcch-hHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999997 7777776321 2233344556667889999999999999999999998 6
Q ss_pred hcCCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++|+||++|||||+.. ...+.+++.++|++++++|+.|++++.+++.+.+.+.+.||++||+++..+.++++.|+++|+
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 204 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKA 204 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCchHHHHHHH
Confidence 7999999999999865 578999999999999999999999999999887766789999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
++++|++..+.+ |..+.+|..|.+..
T Consensus 205 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t 234 (294)
T 3r3s_A 205 AILNYSRGLAKQVAEKGIRVNIVAPGPIWT 234 (294)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCS
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEecCcCcc
Confidence 999999988776 78888888887643
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=221.28 Aligned_cols=176 Identities=21% Similarity=0.219 Sum_probs=152.0
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+.. ..++..+++. .++..++||++|+++++++++++ +
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGAK-VIGTATSES---GAQAISDYLG---DNGKGMALNVTNPESIEAVLKAITD 79 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESSHH---HHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHhc---ccceEEEEeCCCHHHHHHHHHHHHH
Confidence 36799999999999999999999999997 888888742 2233333443 34678899999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+.+ ...+.||++||+++..+.++++.|+++|
T Consensus 80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 159 (248)
T 3op4_A 80 EFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAK 159 (248)
T ss_dssp HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHH
Confidence 79999999999999999999999999999999999999999999886654 2458999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |..+.+|..|.+.
T Consensus 160 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~ 189 (248)
T 3op4_A 160 AGVIGFTKSMAREVASRGVTVNTVAPGFIE 189 (248)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBS
T ss_pred HHHHHHHHHHHHHHHHhCeEEEEEeeCCCC
Confidence 9999999988765 6777788877664
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=229.13 Aligned_cols=182 Identities=17% Similarity=0.146 Sum_probs=158.2
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCc---------ccHHHHHHHHHHhcCCceEEEEeccCCCHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGV---------KNGYQALRIKIWKSYDVQVLISTDDITTEAGV 849 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~---------~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v 849 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+.. ..+..++..++++..|.++.++.||++|++++
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~~-Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGAD-IVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL 122 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCe-EEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 46799999999999999999999999997 676666421 12334455566777888999999999999999
Q ss_pred HHHHHHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccCC
Q psy1119 850 VNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRGN 925 (1392)
Q Consensus 850 ~~l~~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G~ 925 (1392)
+++++++ +++|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~ 202 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA 202 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC
Confidence 9999998 6799999999999999999999999999999999999999999998866542 25789999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 926 AGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 926 ~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++.|+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 203 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 242 (317)
T 3oec_A 203 PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVN 242 (317)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBS
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccc
Confidence 99999999999999999988876 6777888887763
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-21 Score=222.52 Aligned_cols=179 Identities=17% Similarity=0.159 Sum_probs=154.5
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-C-CceEEEEeccCCCHHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-Y-DVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-~-G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
..++++|||||++|||+++|+.|+++|++ |++++|+... .+...++++. . +.++.++.||++|+++++++++++
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~-V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAA-VAFCARDGER---LRAAESALRQRFPGARLFASVCDVLDALQVRAFAEAC 81 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 36799999999999999999999999997 8888998432 3333444443 3 445899999999999999999998
Q ss_pred -hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHH
Q psy1119 857 -NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGM 933 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaa 933 (1392)
+.+|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+++. ..+.||++||+++..+.++++.|++
T Consensus 82 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 161 (265)
T 3lf2_A 82 ERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSA 161 (265)
T ss_dssp HHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHH
Confidence 6799999999999999999999999999999999999999999998876653 3478999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+|+++++|++..+.+ |..+.+|..|.+.
T Consensus 162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~ 193 (265)
T 3lf2_A 162 ARAGVKNLVRSMAFEFAPKGVRVNGILIGLVE 193 (265)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCc
Confidence 999999999988876 6667777777653
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-21 Score=220.85 Aligned_cols=178 Identities=17% Similarity=0.135 Sum_probs=156.0
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+. ...+..++++..|.++.++.||++|.++++++.+.+.+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 103 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAH-VLAWGRTD----GVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAA 103 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESST----HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEcCHH----HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHh
Confidence 46899999999999999999999999997 77777762 23445566777888999999999999999999766777
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+++||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+ ...+.||++||+++..+.++++.|+++|+
T Consensus 104 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 183 (273)
T 3uf0_A 104 TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKH 183 (273)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHH
T ss_pred cCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHH
Confidence 8999999999999999999999999999999999999999999886544 24589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |..+.+|..|.+.
T Consensus 184 a~~~l~~~la~e~~~~gI~vn~v~PG~v~ 212 (273)
T 3uf0_A 184 AVVGLTRALASEWAGRGVGVNALAPGYVV 212 (273)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEEeCCCc
Confidence 999999988776 6677777777664
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-21 Score=218.35 Aligned_cols=178 Identities=20% Similarity=0.215 Sum_probs=156.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+. ...+...++++..|.++.++.||++|+++++++++++ ++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~-v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGAT-VVGTATSQ---ASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAE 79 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESSH---HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCH---HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999997 88889874 2334455666777889999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+++||+||||||+....++.+++.++|++.+++|+.|++++.+++.+.+ ...++||++||.++..+.++++.|+++|+
T Consensus 80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 159 (247)
T 3lyl_A 80 NLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKA 159 (247)
T ss_dssp TCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHH
Confidence 8999999999999999999999999999999999999999998876543 24579999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |.+..+|..|.+.
T Consensus 160 a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 188 (247)
T 3lyl_A 160 GVIGFSKSLAYEVASRNITVNVVAPGFIA 188 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEeeCcEe
Confidence 999999987765 7777888887764
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-21 Score=221.00 Aligned_cols=212 Identities=16% Similarity=0.118 Sum_probs=168.2
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+. +..+...++++..|.++.++.||+++.++++++++.+ +
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 102 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGAR-VVLTARDV---EKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLA 102 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 88889984 3344455666777889999999999999999999998 6
Q ss_pred hcCCccEEEECccc-CCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KLGPVDGIFNLAVV-LKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv-~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
.+|+||+||||||+ ...+++.+++.++|++++++|+.|++++.+++.+++ ...++||++||+++..+.++++.|+++
T Consensus 103 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 182 (262)
T 3rkr_A 103 AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTAS 182 (262)
T ss_dssp HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHH
T ss_pred hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHH
Confidence 78999999999998 567789999999999999999999999999886654 356899999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccC
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQS 1000 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~ 1000 (1392)
|+++++|++..+.+ |+...+|..|.+.. .+....... ........++++.+.+..++...
T Consensus 183 Kaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t-~~~~~~~~~-----~~~~~~~~p~dvA~~v~~l~s~~ 246 (262)
T 3rkr_A 183 KWGLNGLMTSAAEELRQHQVRVSLVAPGSVRT-EFGVGLSAK-----KSALGAIEPDDIADVVALLATQA 246 (262)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------CCCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEecCCCcC-Ccccccccc-----cccccCCCHHHHHHHHHHHhcCc
Confidence 99999999887755 78888888887642 222111100 00111235566666666666543
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.9e-22 Score=225.68 Aligned_cols=179 Identities=18% Similarity=0.183 Sum_probs=155.6
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-CCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-YDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+... .++..++++. .|.++.+++||++|+++++++++++
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 93 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGAR-LVLSGRDVSE---LDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAA 93 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999997 8888997432 2333444443 5788999999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccCCCCChhHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRGNAGQTNYGM 933 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G~~gq~~Yaa 933 (1392)
+++|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|++
T Consensus 94 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 173 (266)
T 4egf_A 94 EAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCT 173 (266)
T ss_dssp HHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHH
Confidence 6799999999999999999999999999999999999999999998866543 2479999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+|+++++|++..+.+ |..+.+|..|.+.
T Consensus 174 sK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~ 205 (266)
T 4egf_A 174 SKAGLVMATKVLARELGPHGIRANSVCPTVVL 205 (266)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESCBC
T ss_pred HHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCc
Confidence 999999999988776 6677777777653
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=222.57 Aligned_cols=179 Identities=23% Similarity=0.192 Sum_probs=157.6
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||++|||+++|+.|+++|++ |++++|+. +..++..++++..|.++.+++||++|+++++++++++ +
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGAD-LVLAARTV---ERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMK 84 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCE-EEEEeCCH---HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 88889974 3344455667777889999999999999999999998 7
Q ss_pred hcCCccEEEECcccC-CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~-~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||++|||||+. ...++.+++.++|++++++|+.|++++.+++.+++. ..+.||++||+++..+.++++.|+++|
T Consensus 85 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 164 (264)
T 3ucx_A 85 AYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAK 164 (264)
T ss_dssp HTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTTCHHHHHHH
T ss_pred HcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCccHHHHHHH
Confidence 799999999999985 678899999999999999999999999998866542 248999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |..+.+|..|.+.
T Consensus 165 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~ 194 (264)
T 3ucx_A 165 SALLAMSQTLATELGEKGIRVNSVLPGYIW 194 (264)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEESSCB
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEecCccc
Confidence 9999999988765 7778888887763
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=225.70 Aligned_cols=182 Identities=16% Similarity=0.085 Sum_probs=157.0
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCc-------------ccHHHHHHHHHHhcCCceEEEEeccCCC
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGV-------------KNGYQALRIKIWKSYDVQVLISTDDITT 845 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~-------------~~~~~~~~~~~l~~~G~~v~~~~~Dv~~ 845 (1392)
..++++|||||++|||+++|+.|+++|++ |++++|+.. ..+..++..++++..|.++.++.||++|
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 87 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGAD-IIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD 87 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence 36899999999999999999999999997 788877621 1333445556677788899999999999
Q ss_pred HHHHHHHHHHH-hhcCCccEEEECcccCCCcc-ccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccc
Q psy1119 846 EAGVVNLLTEA-NKLGPVDGIFNLAVVLKDAL-FENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVS 920 (1392)
Q Consensus 846 ~~~v~~l~~~~-~~~g~I~gvi~~Agv~~d~~-~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s 920 (1392)
+++++++++++ +++|+||++|||||+..... +.+++.++|++++++|+.|++++.+++.+++. ..+.||++||++
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~ 167 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVG 167 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchh
Confidence 99999999998 67999999999999987764 99999999999999999999999998876552 257999999999
Q ss_pred cccCCCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 921 CGRGNAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 921 ~~~G~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+..+.++++.|+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 168 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~ 212 (286)
T 3uve_A 168 GLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVK 212 (286)
T ss_dssp GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred hccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccc
Confidence 9999999999999999999999988776 6667777777664
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.87 E-value=7e-22 Score=226.71 Aligned_cols=180 Identities=18% Similarity=0.255 Sum_probs=145.7
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+. .+..+...++++..|.++.+++||++|+++++++++++ +
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 103 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGFD-IAITGIGD--AEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVA 103 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCC--HHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCCe-EEEEeCCC--HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999997 77777542 23344556667777889999999999999999999998 6
Q ss_pred hcCCccEEEECccc--CCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC-----CCeEEEecccccccCCCCChh
Q psy1119 858 KLGPVDGIFNLAVV--LKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT-----LGQFVVFSSVSCGRGNAGQTN 930 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv--~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~-----l~~fV~~SS~s~~~G~~gq~~ 930 (1392)
++|+||+||||||+ ....++.+++.++|++++++|+.|++++.+++.+.+.+ .+.||++||+++..+.++++.
T Consensus 104 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~ 183 (280)
T 4da9_A 104 EFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLD 183 (280)
T ss_dssp HHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHH
T ss_pred HcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccH
Confidence 79999999999998 56788999999999999999999999999988665422 569999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 931 YGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 184 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 218 (280)
T 4da9_A 184 YCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIR 218 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCc
Confidence 999999999999988776 5667777777663
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=223.98 Aligned_cols=180 Identities=17% Similarity=0.136 Sum_probs=155.6
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC-CceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY-DVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~-G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+.. +..+...++++.. +.++.++.||++|+++++++++++
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~G~~-V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 99 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKAGAN-IVLNGFGAP--DEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA 99 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEECCCCH--HHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCCh--HHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 35789999999999999999999999996 888888532 2333444555544 678999999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+++|+||+||||||+.....+.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++
T Consensus 100 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 179 (281)
T 3v2h_A 100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAA 179 (281)
T ss_dssp HHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHH
Confidence 6799999999999999999999999999999999999999999998865542 44799999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++++|++..+.+ |..+.+|..|.+.
T Consensus 180 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 210 (281)
T 3v2h_A 180 KHGIMGLTKTVALEVAESGVTVNSICPGYVL 210 (281)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEECCCCc
Confidence 99999999988776 6777778777664
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.7e-22 Score=230.67 Aligned_cols=180 Identities=19% Similarity=0.215 Sum_probs=156.5
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCC-------cccHHHHHHHHHHhcCCceEEEEeccCCCHHHHH
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSG-------VKNGYQALRIKIWKSYDVQVLISTDDITTEAGVV 850 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~-------~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~ 850 (1392)
...++++|||||+||||+++|++|+++|++ |++++|+. ......+...++++..|.++.++.||++|+++++
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 102 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGAR-VVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAA 102 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 356899999999999999999999999997 77877761 1123345556677778889999999999999999
Q ss_pred HHHHHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC--------CCeEEEeccccc
Q psy1119 851 NLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT--------LGQFVVFSSVSC 921 (1392)
Q Consensus 851 ~l~~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~--------l~~fV~~SS~s~ 921 (1392)
++++++ +++|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+.. .+.||++||+++
T Consensus 103 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~ 182 (322)
T 3qlj_A 103 GLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG 182 (322)
T ss_dssp HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH
Confidence 999998 67999999999999999999999999999999999999999999987655421 269999999999
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEcc
Q psy1119 922 GRGNAGQTNYGMANSIMERICEARRAE----GLPGLAVEWG 958 (1392)
Q Consensus 922 ~~G~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g 958 (1392)
..+.++++.|+++|+++++|++..+.+ |+.+.+|..|
T Consensus 183 ~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG 223 (322)
T 3qlj_A 183 LQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS 223 (322)
T ss_dssp HHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred ccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC
Confidence 999999999999999999999988776 6667778777
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.87 E-value=9.7e-22 Score=222.94 Aligned_cols=178 Identities=20% Similarity=0.188 Sum_probs=153.1
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEe-cCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLT-SRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~-sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
..++++|||||+||||+++|+.|+++|++ |+++ .|+. +......++++..|.++.++.||++|+++++++++++
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGAN-VVLTYNGAA---EGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAA 81 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECSSC---HHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCCH---HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 35799999999999999999999999998 5655 5543 3344556677778889999999999999999999998
Q ss_pred hhcCCccEEEECcccC-CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccc-cCCCCChhHHHH
Q psy1119 857 NKLGPVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCG-RGNAGQTNYGMA 934 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~-~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~-~G~~gq~~Yaaa 934 (1392)
+++|+||++|||||+. ...++.+++.++|++++++|+.|++++.+++.+.+.+.+.||++||+++. .+.++++.|+++
T Consensus 82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as 161 (259)
T 3edm_A 82 DKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATS 161 (259)
T ss_dssp HHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHHHHHH
T ss_pred HHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHHHHHH
Confidence 6799999999999987 77889999999999999999999999999988766556799999999998 789999999999
Q ss_pred HHHHHHHHHHHHHcCC---CeEEEEcccc
Q psy1119 935 NSIMERICEARRAEGL---PGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~Gl---p~~ai~~g~~ 960 (1392)
|+++++|++..+.+.- .+.+|..|.+
T Consensus 162 Kaa~~~l~~~la~e~~~~I~vn~v~PG~v 190 (259)
T 3edm_A 162 KGAVMTFTRGLAKEVGPKIRVNAVCPGMI 190 (259)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECCB
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEEECCC
Confidence 9999999999887743 3455555544
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-21 Score=222.68 Aligned_cols=180 Identities=18% Similarity=0.186 Sum_probs=155.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHh-cCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK-SYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~-~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+... ..+..+++. ..|.++.++.||++|+++++++++++
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~~-V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 100 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCH-TVIASRSLPR---VLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQAL 100 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCE-EEEEESCHHH---HHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999996 8888998432 222333332 34778999999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+++|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+ ...+.||++||+++..+.++++.|+++
T Consensus 101 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 180 (277)
T 4fc7_A 101 KEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSA 180 (277)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHH
T ss_pred HHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHH
Confidence 679999999999999989999999999999999999999999999886654 235799999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
|+++++|++..+.+ |..+.+|..|.+..
T Consensus 181 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t 212 (277)
T 4fc7_A 181 KAAVDAMTRHLAVEWGPQNIRVNSLAPGPISG 212 (277)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBSS
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEEECCEec
Confidence 99999999988776 67778888877643
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.7e-22 Score=222.10 Aligned_cols=215 Identities=20% Similarity=0.151 Sum_probs=158.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+....+.....+......+.++.++.||++|.++++++++++ ++
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGYR-VVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTCE-EEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999999996 888899853333222222222112367889999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|+||++|||||+.....+ +.+.++|++++++|+.|++++.+++.+.+ ...+.||++||+++..|.++++.|+++|+
T Consensus 85 ~g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 163 (250)
T 3nyw_A 85 YGAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKF 163 (250)
T ss_dssp HCCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHHHH
Confidence 9999999999999988888 88999999999999999999999886654 24589999999999998888999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccCCC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEP 1002 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~~ 1002 (1392)
++++|++..+.+ |..+.+|..|.+.. .+....... ........+++..+.+..+++.+..
T Consensus 164 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T-~~~~~~~~~-----~~~~~~~~p~dva~~v~~l~s~~~~ 227 (250)
T 3nyw_A 164 ALLGLAESLYRELAPLGIRVTTLCPGWVNT-DMAKKAGTP-----FKDEEMIQPDDLLNTIRCLLNLSEN 227 (250)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESSBCS-HHHHHTTCC-----SCGGGSBCHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEecCcccC-chhhhcCCC-----cccccCCCHHHHHHHHHHHHcCCCc
Confidence 999999988776 67777887776632 221110000 0001123566666777666665443
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=222.39 Aligned_cols=176 Identities=19% Similarity=0.241 Sum_probs=141.0
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+.. ..++..+ ..|.++.+++||++|+++++++++++ +
T Consensus 25 l~gk~vlVTGas~gIG~aia~~la~~G~~-V~~~~r~~~---~~~~~~~---~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAIARCFHAQGAI-VGLHGTRED---KLKEIAA---DLGKDVFVFSANLSDRKSIKQLAEVAER 97 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHH---HHCSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHH---HhCCceEEEEeecCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 888888732 2222222 33678999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+ ...+.||++||+++..|.++++.|+++|
T Consensus 98 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 177 (266)
T 3grp_A 98 EMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAK 177 (266)
T ss_dssp HHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHH
Confidence 79999999999999999999999999999999999999999998876654 2457999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |..+.+|..|.+.
T Consensus 178 aa~~~~~~~la~e~~~~gI~vn~v~PG~v~ 207 (266)
T 3grp_A 178 AGLIGFSKALAQEIASRNITVNCIAPGFIK 207 (266)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEeeCcCC
Confidence 9999999988766 6677777777663
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-21 Score=223.22 Aligned_cols=178 Identities=19% Similarity=0.146 Sum_probs=154.7
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.+++++|||||+||||+++|+.|+++|++ |++++|+. +..++..++++..|.++.++.||++|+++++++++++ +
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVT-VGALGRTR---TEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL 101 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESSH---HHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCH---HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999996 88888874 3344556677778889999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEeccccccc--CCCCChhHH
Q psy1119 858 KLGPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGR--GNAGQTNYG 932 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~--G~~gq~~Ya 932 (1392)
++|+||++|||||+... .++.+++.++|++++++|+.|++++.+++.+++. ..+.||++||+++.. +.++++.|+
T Consensus 102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~ 181 (283)
T 3v8b_A 102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYT 181 (283)
T ss_dssp HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHH
T ss_pred HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHH
Confidence 79999999999998754 8899999999999999999999999998866542 458999999999987 889999999
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++|+++++|++..+.+ |..+.+|..|.+
T Consensus 182 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v 213 (283)
T 3v8b_A 182 ATKAAQVAIVQQLALELGKHHIRVNAVCPGAI 213 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHHHHHhCccCcEEEEEEeCCC
Confidence 9999999999998876 444566766665
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-21 Score=220.55 Aligned_cols=182 Identities=17% Similarity=0.214 Sum_probs=155.8
Q ss_pred cccCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHH-hcCCceEEEEeccCCCHHHHHHHHH
Q psy1119 776 YYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIW-KSYDVQVLISTDDITTEAGVVNLLT 854 (1392)
Q Consensus 776 ~~~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l-~~~G~~v~~~~~Dv~~~~~v~~l~~ 854 (1392)
.....++++|||||+||||+++|++|+++|++ |++++|+... .+...+++ +..|.++.++.||++++++++++++
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~ 91 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCS-VVVASRNLEE---ASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE 91 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 34456899999999999999999999999997 8888887422 22333334 3447788899999999999999999
Q ss_pred HH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccc-cccCCCCChh
Q psy1119 855 EA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVS-CGRGNAGQTN 930 (1392)
Q Consensus 855 ~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s-~~~G~~gq~~ 930 (1392)
++ +++|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||++ +..+.++++.
T Consensus 92 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~ 171 (267)
T 1vl8_A 92 AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISA 171 (267)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHH
T ss_pred HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChh
Confidence 98 6799999999999998888999999999999999999999999998866553 347999999999 8889999999
Q ss_pred HHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 931 YGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++|+++++|++..+.+ |+.+.+|..|.+.
T Consensus 172 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 206 (267)
T 1vl8_A 172 YAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYR 206 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCc
Confidence 999999999999987765 8888888888763
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.4e-21 Score=219.98 Aligned_cols=179 Identities=22% Similarity=0.211 Sum_probs=157.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+. +..++..++++..|.++.++.||++|+++++++++++ ++
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAK-VVVTARNG---NALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR 82 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE-EEECCSCH---HHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 88899984 3344556667777889999999999999999999998 67
Q ss_pred cCCccEEEECcccC-CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccc-cCCCCChhHHHH
Q psy1119 859 LGPVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCG-RGNAGQTNYGMA 934 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~-~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~-~G~~gq~~Yaaa 934 (1392)
+|+||++|||||+. ...++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++. .+.++++.|+++
T Consensus 83 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as 162 (280)
T 3tox_A 83 FGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAAS 162 (280)
T ss_dssp HSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHH
Confidence 99999999999987 458899999999999999999999999998866543 35799999999998 789999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
|+++++|++..+.+ |..+.+|..|.+..
T Consensus 163 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T 194 (280)
T 3tox_A 163 KAGLIGLVQALAVELGARGIRVNALLPGGTDT 194 (280)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEEECSBSS
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEEECCCCC
Confidence 99999999988776 67777888877643
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=226.91 Aligned_cols=179 Identities=21% Similarity=0.166 Sum_probs=157.5
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+. +..+...++++..|.++.++.||++|.++++++++++ +
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~-V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGAR-LVLSDVDQ---PALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFR 104 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 88889984 3344455667777889999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC---CCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT---LGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~---l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
.+|+||+||||||+...+++.+++.++|++++++|+.|++++.+++.+.+.+ .+.||++||+++..+.++++.|+++
T Consensus 105 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 184 (301)
T 3tjr_A 105 LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVA 184 (301)
T ss_dssp HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHH
Confidence 7899999999999999999999999999999999999999999988665422 5799999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++++|++..+.+ |..+.+|..|.+.
T Consensus 185 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 215 (301)
T 3tjr_A 185 KYGVVGLAETLAREVKPNGIGVSVLCPMVVE 215 (301)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEECCSCCC
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEECCccc
Confidence 99999999988766 6666777776653
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-21 Score=222.25 Aligned_cols=185 Identities=18% Similarity=0.099 Sum_probs=157.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccH----HHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNG----YQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~----~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
.+|++|||||++|||+++|+.|+++|++ |++++|+....+ ..+...++++..|.++.+++||++|++++++++++
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 83 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGAN-VAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA 83 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence 5799999999999999999999999996 888999864321 12334445566688999999999999999999999
Q ss_pred H-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccC--CCCChh
Q psy1119 856 A-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRG--NAGQTN 930 (1392)
Q Consensus 856 ~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G--~~gq~~ 930 (1392)
+ +++|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+++. ..+.||++||+++..+ .++++.
T Consensus 84 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~ 163 (274)
T 3e03_A 84 TVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTG 163 (274)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCHH
T ss_pred HHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCch
Confidence 8 6799999999999999999999999999999999999999999998877653 3479999999999988 789999
Q ss_pred HHHHHHHHHHHHHHHHHc----CCCeEEEEccccCcccc
Q psy1119 931 YGMANSIMERICEARRAE----GLPGLAVEWGAVGEVGL 965 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~~~G~ 965 (1392)
|+++|+++++|++..+.+ |..+.+|..|.+-+..+
T Consensus 164 Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~ 202 (274)
T 3e03_A 164 YTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA 202 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC--
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccch
Confidence 999999999999988766 67778888875434443
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=5.2e-21 Score=218.48 Aligned_cols=177 Identities=24% Similarity=0.245 Sum_probs=152.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+...... ..+++ |.++..+.||++|+++++++++++ +
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~---~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARAGAR-VVLADLPETDLAG---AAASV---GRGAVHHVVDLTNEVSVRALIDFTID 81 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECTTSCHHH---HHHHH---CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEcCCHHHHHH---HHHHh---CCCeEEEECCCCCHHHHHHHHHHHHH
Confidence 35799999999999999999999999997 8888998644322 22333 667888999999999999999998 7
Q ss_pred hcCCccEEEECcccCC--CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHH
Q psy1119 858 KLGPVDGIFNLAVVLK--DALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGM 933 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~--d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaa 933 (1392)
++|+||++|||||+.. +..+.+++.++|++++++|+.|++++.+++.+++ ...+.||++||+++..+.++++.|++
T Consensus 82 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a 161 (271)
T 3tzq_B 82 TFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYAC 161 (271)
T ss_dssp HHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHH
Confidence 7999999999999872 6678999999999999999999999999886654 34589999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
+|+++++|++..+.+ |..+.+|..|.+..
T Consensus 162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t 194 (271)
T 3tzq_B 162 TKAAIETLTRYVATQYGRHGVRCNAIAPGLVRT 194 (271)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred HHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcC
Confidence 999999999988876 67778888887643
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-21 Score=218.75 Aligned_cols=175 Identities=17% Similarity=0.157 Sum_probs=151.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.. ..++..+++ +.++.+++||++|+++++++++++ ++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~ 79 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGAT-VAIADIDIE---RARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEH 79 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 888888742 222333333 556888999999999999999998 77
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++|
T Consensus 80 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 159 (259)
T 4e6p_A 80 AGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATK 159 (259)
T ss_dssp SSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHH
Confidence 99999999999999999999999999999999999999999998866542 257999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |....+|..|.+.
T Consensus 160 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~ 189 (259)
T 4e6p_A 160 AAVISLTQSAGLDLIKHRINVNAIAPGVVD 189 (259)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHhhhcCCEEEEEEECCCc
Confidence 9999999988765 6777778777664
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=5.2e-21 Score=219.87 Aligned_cols=180 Identities=14% Similarity=0.199 Sum_probs=157.4
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+.. ...+...++++..|.++.++.||+++.++++++++++ +
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGCK-VIVNYANST--ESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK 103 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCH--HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCch--HHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 778888742 2223344556667888999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC-ChhHHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG-QTNYGMANS 936 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g-q~~Yaaana 936 (1392)
.+|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+...+.||++||+++..+.++ ++.|+++|+
T Consensus 104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~ 183 (283)
T 1g0o_A 104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKG 183 (283)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCcchHHHHH
Confidence 7899999999999988889999999999999999999999999998877666689999999999988775 999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |+.+.+|..|.+.
T Consensus 184 a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 212 (283)
T 1g0o_A 184 AIETFARCMAIDMADKKITVNVVAPGGIK 212 (283)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred HHHHHHHHHHHHhcccCeEEEEEecCccc
Confidence 999999988755 7888888888764
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.3e-21 Score=215.88 Aligned_cols=179 Identities=21% Similarity=0.263 Sum_probs=154.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+. .+..++..++++..|.++.++.||++|+++++++++++ ++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~-V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGAN-VVVNYAGN--EQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDV 79 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSC--HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCC--HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999997 77777732 12233444556666788999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++|+
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 159 (246)
T 2uvd_A 80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKA 159 (246)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHH
Confidence 99999999999998888999999999999999999999999988766542 4589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |....+|..|.+.
T Consensus 160 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 188 (246)
T 2uvd_A 160 GVIGLTKTSAKELASRNITVNAIAPGFIA 188 (246)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBG
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEEecccc
Confidence 999999887654 7777888887763
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-21 Score=221.10 Aligned_cols=180 Identities=21% Similarity=0.219 Sum_probs=157.3
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+.. +..+...++++..|.++.++.||+++.++++++++++ +
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 103 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGLK-VWINYRSNA--EVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ 103 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCH--HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCCH--HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 36799999999999999999999999997 778888632 3334455566777889999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
.+++||+||||||+..+..+.+++.++|++.+++|+.|++++.+++.+.+. ..++||++||+++..+.++++.|+++|
T Consensus 104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 183 (271)
T 4iin_A 104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASK 183 (271)
T ss_dssp HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHH
Confidence 789999999999999999999999999999999999999999988766542 448999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |....+|..|.+.
T Consensus 184 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 213 (271)
T 4iin_A 184 GGMIAMSKSFAYEGALRNIRFNSVTPGFIE 213 (271)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHHhCcEEEEEEeCccc
Confidence 9999999988766 6667778777664
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.5e-21 Score=217.53 Aligned_cols=180 Identities=19% Similarity=0.156 Sum_probs=155.9
Q ss_pred cCCCCeEEEEcCcc-hHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC-CceEEEEeccCCCHHHHHHHHHH
Q psy1119 778 ADSNKSYIICGGLG-GFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY-DVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 778 ~~~~~~ylItGG~g-GiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~-G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
...++++|||||+| |||+++|++|+++|++ |++++|+... .....++++.. +.++.++.||++|.+++++++++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~-V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGAD-VVISDYHERR---LGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCE-EEEecCCHHH---HHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHH
Confidence 35789999999986 9999999999999997 8888888432 33444555444 46899999999999999999999
Q ss_pred H-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccCCCCChhH
Q psy1119 856 A-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 856 ~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
+ +++++||+||||||+....++.+++.++|++++++|+.|++++.+++.+++. ..+.||++||.++..+.++++.|
T Consensus 95 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y 174 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHY 174 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHH
T ss_pred HHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchH
Confidence 8 6789999999999999999999999999999999999999999998876543 34789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 932 GMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 932 aaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++|+++++|++..+.+ |....+|..|.+.
T Consensus 175 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 208 (266)
T 3o38_A 175 AAAKAGVMALTRCSAIEAVEFGVRINAVSPSIAR 208 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCccc
Confidence 99999999999988765 6777788877664
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-21 Score=216.52 Aligned_cols=207 Identities=15% Similarity=0.075 Sum_probs=155.7
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
++++|||||+||||+++|+.|+++|++ |++++|+... .++..+++ +.++.++.||++|+++++++++++ +++
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~-V~~~~r~~~~---~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 75 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQ-VSMMGRRYQR---LQQQELLL---GNAVIGIVADLAHHEDVDVAFAAAVEWG 75 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHH---GGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHH---HHHHHHHh---cCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 579999999999999999999999997 8889998422 23333344 335888999999999999999998 678
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+++. ..+.||++||.++..+.++++.|+++|+++
T Consensus 76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~ 155 (235)
T 3l6e_A 76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGM 155 (235)
T ss_dssp CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSHHHHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCCcHHHHHHHHH
Confidence 9999999999998888999999999999999999999999998876653 345999999999999999999999999999
Q ss_pred HHHHHHHHHc----CCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccCC
Q psy1119 939 ERICEARRAE----GLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSE 1001 (1392)
Q Consensus 939 d~la~~r~~~----Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~ 1001 (1392)
++|++..+.+ |....+|..|.+.. .+...... ........++++.+.+-.++..+.
T Consensus 156 ~~~~~~la~e~~~~gi~v~~v~PG~v~T-~~~~~~~~------~~~~~~~~pedvA~~v~~l~~~~~ 215 (235)
T 3l6e_A 156 RGFLESLRAELKDSPLRLVNLYPSGIRS-EFWDNTDH------VDPSGFMTPEDAAAYMLDALEARS 215 (235)
T ss_dssp HHHHHHHHHHTTTSSEEEEEEEEEEECC-CC-----------------CBCHHHHHHHHHHHTCCCS
T ss_pred HHHHHHHHHHhhccCCEEEEEeCCCccC-cchhccCC------CCCcCCCCHHHHHHHHHHHHhCCC
Confidence 9999998876 44556666665532 22211100 000123456666666666665443
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.1e-21 Score=216.87 Aligned_cols=179 Identities=20% Similarity=0.219 Sum_probs=155.1
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
++++|||||+||||+++|++|+++|++ |++++|+... .......++++..|.++.++.||++|+++++++++++ +++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFD-IAVADLPQQE-EQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL 79 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECGGGH-HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcch-HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 579999999999999999999999997 8888887532 1133445566666888999999999999999999998 679
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CC-CeEEEecccccccCCCCChhHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TL-GQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l-~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. .. +.||++||+++..+.++++.|+++|+
T Consensus 80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 159 (258)
T 3a28_C 80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKF 159 (258)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHH
Confidence 9999999999998888999999999999999999999999998876542 34 79999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |....+|..|.+.
T Consensus 160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~ 188 (258)
T 3a28_C 160 AVRGLTQAAAQELAPKGHTVNAYAPGIVG 188 (258)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHhhCeEEEEEECCccC
Confidence 999999988765 7777888887663
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.8e-21 Score=220.84 Aligned_cols=179 Identities=19% Similarity=0.230 Sum_probs=154.1
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCc---eEEEEeccCCCHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDV---QVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~---~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+.. ..+...++++..|. ++.++.||++|++++++++++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 84 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGAS-VMIVGRNPD---KLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA 84 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence 35799999999999999999999999997 888888743 23344556666555 899999999999999999999
Q ss_pred H-hhcCCccEEEECccc-CCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhH
Q psy1119 856 A-NKLGPVDGIFNLAVV-LKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 856 ~-~~~g~I~gvi~~Agv-~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
+ +++|+||++|||||+ ....++.+++.++|++++++|+.|++++.+++.+.+ ...+.||++||+++..+.++++.|
T Consensus 85 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 164 (281)
T 3svt_A 85 VTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAY 164 (281)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHH
T ss_pred HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhH
Confidence 8 679999999999998 666789999999999999999999999999886654 245799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 932 GMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 932 aaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 165 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~ 198 (281)
T 3svt_A 165 GVTKSAVDHLMQLAADELGASWVRVNSIRPGLIR 198 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCc
Confidence 99999999999988765 4666777777653
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-21 Score=220.59 Aligned_cols=168 Identities=20% Similarity=0.183 Sum_probs=143.3
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+|++|||||++|||+++|+.|+++||+ |++++|+.... ..+...++||++++++++++++++ +
T Consensus 9 L~GK~alVTGas~GIG~aia~~la~~Ga~-V~~~~r~~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~ 74 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFLELGAQ-VLTTARARPEG-------------LPEELFVEADLTTKEGCAIVAEATRQ 74 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHHHTTCE-EEEEESSCCTT-------------SCTTTEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCcHHHHHHHHHHHHcCCE-EEEEECCchhC-------------CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999997 88889974311 122346789999999999999998 7
Q ss_pred hcCCccEEEECcccCC--CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCC-CChhHH
Q psy1119 858 KLGPVDGIFNLAVVLK--DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNA-GQTNYG 932 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~--d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~-gq~~Ya 932 (1392)
++|+||++|||||+.. ..+|.+++.|+|+++++.|+.|++++.+++.+++. ..+.||++||+++..+.+ +++.|+
T Consensus 75 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~ 154 (261)
T 4h15_A 75 RLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYA 154 (261)
T ss_dssp HTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHH
T ss_pred HcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHH
Confidence 7999999999999754 46899999999999999999999999998876653 458999999999999976 799999
Q ss_pred HHHHHHHHHHHHHHHcCC----CeEEEEcccc
Q psy1119 933 MANSIMERICEARRAEGL----PGLAVEWGAV 960 (1392)
Q Consensus 933 aana~ld~la~~r~~~Gl----p~~ai~~g~~ 960 (1392)
++|+++.+|++..+.+.. .+.+|..|.+
T Consensus 155 asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i 186 (261)
T 4h15_A 155 AAKAALSTYSKAMSKEVSPKGVRVVRVSPGWI 186 (261)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCc
Confidence 999999999999988744 4455555544
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-21 Score=221.82 Aligned_cols=181 Identities=20% Similarity=0.252 Sum_probs=156.4
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
...++++|||||+||||+++|++|+++|++ |++++|+. .+......++++..|.++.++.||++|.++++++++++
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~-v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 98 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMA-VAVSHSER--NDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVL 98 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCE-EEEEECSC--HHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCc--hHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 357899999999999999999999999998 66666442 23344445566677888999999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+.+|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+ ...++||++||.++..+.++++.|+++
T Consensus 99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 178 (269)
T 3gk3_A 99 ADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASA 178 (269)
T ss_dssp HHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHH
T ss_pred HHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHH
Confidence 678999999999999999999999999999999999999999999886644 245899999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++++|++..+.+ |..+.+|..|.+.
T Consensus 179 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 209 (269)
T 3gk3_A 179 KAGIHGFTKTLALETAKRGITVNTVSPGYLA 209 (269)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHhhhcCCEEEEEecCccc
Confidence 99999999988766 7778888888764
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-21 Score=222.29 Aligned_cols=179 Identities=17% Similarity=0.125 Sum_probs=155.6
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+.... +...++++..|.++.+++||++|+++++++++++ +
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 105 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGAQ-VAVAARHSDAL---QVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG 105 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESSGGGG---HHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHH---HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 88889985433 3344556677888999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC---CCeEEEecccccccCC--CCChhHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT---LGQFVVFSSVSCGRGN--AGQTNYG 932 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~---l~~fV~~SS~s~~~G~--~gq~~Ya 932 (1392)
++|+||+||||||+.....+.+++.++|++++++|+.|++++.+++.+.+.+ .+.||++||+++..++ ++.+.|+
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~ 185 (276)
T 3r1i_A 106 ELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYC 185 (276)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHH
Confidence 7999999999999999999999999999999999999999999988665422 3789999999998876 4789999
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 186 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~ 218 (276)
T 3r1i_A 186 TSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIR 218 (276)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCc
Confidence 9999999999988776 6777788877664
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.8e-21 Score=217.83 Aligned_cols=176 Identities=18% Similarity=0.226 Sum_probs=145.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+...... ..++ .+.++.++.||++|+++++++++++ ++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~---~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGAT-VLGLDLKPPAGEE---PAAE---LGAAVRFRNADVTNEADATAALAFAKQE 78 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESSCC------------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChHHHHH---HHHH---hCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 8888888643322 2222 2667888999999999999999998 67
Q ss_pred cCCccEEEECcccCCCcccc----CCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--------CCCeEEEecccccccCCC
Q psy1119 859 LGPVDGIFNLAVVLKDALFE----NQTPEDFNASLGPKANATKYFDKYSRTMCP--------TLGQFVVFSSVSCGRGNA 926 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~----~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--------~l~~fV~~SS~s~~~G~~ 926 (1392)
+|+||++|||||+.....+. +.+.++|++++++|+.|++++.+++.+++. ..+.||++||+++..+.+
T Consensus 79 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~ 158 (257)
T 3tpc_A 79 FGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI 158 (257)
T ss_dssp HSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred cCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC
Confidence 99999999999998766543 789999999999999999999998876553 247899999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 927 GQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 927 gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
+++.|+++|+++++|++..+.+ |..+.+|..|.+..
T Consensus 159 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t 198 (257)
T 3tpc_A 159 GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDT 198 (257)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSC
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCC
Confidence 9999999999999999887765 77788888887643
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.6e-21 Score=219.56 Aligned_cols=175 Identities=17% Similarity=0.182 Sum_probs=151.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+.. ..++..++ .|.++..++||++|+++++++++++ +
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~~-V~~~~r~~~---~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGAY-VVVADVNED---AAVRVANE---IGSKAFGVRVDVSSAKDAESMVEKTTA 97 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSHH---HHHHHHHH---HCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 35799999999999999999999999997 888888742 22222222 3667889999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC--CCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT--LGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~--l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+.+ .+.||++||+++..+.++++.|+++|
T Consensus 98 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 177 (277)
T 4dqx_A 98 KWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASK 177 (277)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHH
Confidence 7999999999999999999999999999999999999999999988766543 47999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++++|++..+.+ |....+|..|.+
T Consensus 178 aa~~~l~~~la~e~~~~gi~vn~v~PG~v 206 (277)
T 4dqx_A 178 GAISSLTRAMAMDHAKEGIRVNAVAPGTI 206 (277)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCcC
Confidence 9999999988766 566677777665
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.6e-21 Score=220.32 Aligned_cols=176 Identities=20% Similarity=0.222 Sum_probs=153.0
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+.. ..++..+++ |.++.+++||++|+++++++++++ +
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~~-V~~~~r~~~---~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGCH-VLCADIDGD---AADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVA 99 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTCE-EEEEESSHH---HHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 888888742 222333333 677889999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+ ...+.||++||+++..+.++++.|+++|
T Consensus 100 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 179 (277)
T 3gvc_A 100 AFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSK 179 (277)
T ss_dssp HHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHH
Confidence 79999999999999999999999999999999999999999999887654 3458999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |..+.+|..|.+.
T Consensus 180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 209 (277)
T 3gvc_A 180 AGIIQLSRITAAELRSSGIRSNTLLPAFVD 209 (277)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeCCcc
Confidence 9999999987765 6667777777653
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.86 E-value=5.4e-21 Score=215.92 Aligned_cols=179 Identities=18% Similarity=0.152 Sum_probs=150.1
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC-CceEEEEeccC--CCHHHHHHHHH
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY-DVQVLISTDDI--TTEAGVVNLLT 854 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~-G~~v~~~~~Dv--~~~~~v~~l~~ 854 (1392)
...++++|||||+||||+++|+.|+++|++ |++++|+... .++..++++.. +.++.++.+|+ ++.++++++++
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGAT-VILLGRNEEK---LRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQ 84 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHH
Confidence 357899999999999999999999999997 8888998432 22333444333 34678889999 99999999999
Q ss_pred HH-hhcCCccEEEECcccC-CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChh
Q psy1119 855 EA-NKLGPVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTN 930 (1392)
Q Consensus 855 ~~-~~~g~I~gvi~~Agv~-~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~ 930 (1392)
++ +++|+||++|||||+. ...++.+.+.++|++++++|+.|++++.+++.+++ ...+.||++||+++..+.++++.
T Consensus 85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~ 164 (252)
T 3f1l_A 85 RIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGA 164 (252)
T ss_dssp HHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHH
T ss_pred HHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCch
Confidence 98 6799999999999986 45789999999999999999999999999886655 34589999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCC---eEEEEcccc
Q psy1119 931 YGMANSIMERICEARRAEGLP---GLAVEWGAV 960 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~Glp---~~ai~~g~~ 960 (1392)
|+++|+++++|++..+.+..+ ..+|..|.+
T Consensus 165 Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v 197 (252)
T 3f1l_A 165 YAASKFATEGMMQVLADEYQQRLRVNCINPGGT 197 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSB
T ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcc
Confidence 999999999999999888644 344444443
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-21 Score=223.60 Aligned_cols=178 Identities=15% Similarity=0.148 Sum_probs=149.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC-CceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY-DVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~-G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+... .+...+++... +..+.+++||++|+++++++++++ +
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 107 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYS-VVITGRRPDV---LDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA 107 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHH---HHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 5799999999999999999999999997 8888998432 23333444333 334588999999999999999998 6
Q ss_pred hcCCccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC----CCeEEEecccccccCCCCChhHH
Q psy1119 858 KLGPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT----LGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~----l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
++|+||+||||||+... .++.+++.++|++++++|+.|++++.+++.+.+.+ .+.||++||+++..+.++++.|+
T Consensus 108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~ 187 (281)
T 4dry_A 108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYT 187 (281)
T ss_dssp HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHH
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHH
Confidence 79999999999998754 78999999999999999999999999988665422 47999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 188 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 220 (281)
T 4dry_A 188 ATKHAITGLTKSTALDGRMHDIACGQIDIGNAA 220 (281)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBC
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEECcCc
Confidence 9999999999988765 6667777777664
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.3e-21 Score=217.88 Aligned_cols=181 Identities=15% Similarity=0.188 Sum_probs=154.4
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
+.+++++|||||+||||+++|++|+++|++.+++..|+. +..+...++++..+.++.++.||++|.++++++++++
T Consensus 23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 99 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANR---EAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVD 99 (272)
T ss_dssp -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH---HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCh---hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 346789999999999999999999999998444446663 3334455666777889999999999999999999998
Q ss_pred hhcCCccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-----CCCeEEEecccccccCCC-CCh
Q psy1119 857 NKLGPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-----TLGQFVVFSSVSCGRGNA-GQT 929 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-----~l~~fV~~SS~s~~~G~~-gq~ 929 (1392)
+++|+||+||||||+... .++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.+ +.+
T Consensus 100 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 179 (272)
T 4e3z_A 100 RQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYV 179 (272)
T ss_dssp HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCH
T ss_pred HhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcc
Confidence 678999999999999875 7899999999999999999999999988766543 257899999999999887 778
Q ss_pred hHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 930 NYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
.|+++|+++++|++..+.+ |+...+|..|.+.
T Consensus 180 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 215 (272)
T 4e3z_A 180 DYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIE 215 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCc
Confidence 9999999999999887766 7888888888764
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=4.3e-21 Score=217.20 Aligned_cols=177 Identities=17% Similarity=0.138 Sum_probs=153.6
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
++++|||||+||||+++|++|+++|++ |++++|+.. ..+...++++..|.++.++.||++|+++++++++++ +++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFA-VAIADYNDA---TAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL 77 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 478999999999999999999999997 888888742 233344556666778999999999999999999998 679
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--C-CCeEEEecccccccCCCCChhHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--T-LGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~-l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. . .+.||++||.++..+.++++.|+++|+
T Consensus 78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 157 (256)
T 1geg_A 78 GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKF 157 (256)
T ss_dssp TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHH
Confidence 9999999999998888999999999999999999999999988866542 2 579999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |....+|..|.+.
T Consensus 158 a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 186 (256)
T 1geg_A 158 AVRGLTQTAARDLAPLGITVNGYCPGIVK 186 (256)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBS
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEEECCCc
Confidence 999999988765 6777778777653
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=5.2e-21 Score=217.93 Aligned_cols=179 Identities=24% Similarity=0.246 Sum_probs=153.7
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC--CceEEEEeccCCCHHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY--DVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~--G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+... .+...++++.. |.++.++.||++|+++++++++++
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 86 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGAK-LSLVDVSSEG---LEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTAT 86 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 36799999999999999999999999997 8888887422 22333344333 678899999999999999999998
Q ss_pred -hhcCCccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHH
Q psy1119 857 -NKLGPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
+++|+||+||||||+... .++.+++.++|++++++|+.|++++.+++.+.+. ..++||++||+++..+.++++.|+
T Consensus 87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 166 (267)
T 1iy8_A 87 TERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYA 166 (267)
T ss_dssp HHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHH
T ss_pred HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHH
Confidence 679999999999999877 7899999999999999999999999888766542 458999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++|+++++|++..+.+ |+.+.+|..|.+.
T Consensus 167 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 199 (267)
T 1iy8_A 167 AAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIW 199 (267)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCc
Confidence 9999999999987765 7888888888663
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=9e-21 Score=215.99 Aligned_cols=180 Identities=19% Similarity=0.185 Sum_probs=156.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++.+++..|+. ...+...++++..+.++.++.||++|+++++++++++ ++
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDA---AGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ 101 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH---HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCch---HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999998556666653 3344556667777889999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC---CCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC---PTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~---~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++++|+||||||+.....+.+++.++|++.+++|+.|++++.+++.+.+ ...++||++||.++..+.++++.|+++|
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 181 (267)
T 4iiu_A 102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAK 181 (267)
T ss_dssp HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred hCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHH
Confidence 8999999999999999999999999999999999999999988764322 3568999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
+++++|++..+.+ |.+..+|.+|.+..
T Consensus 182 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t 212 (267)
T 4iiu_A 182 AGIIGATKALAIELAKRKITVNCIAPGLIDT 212 (267)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEEEeeecC
Confidence 9999999887765 77788888887744
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=8.4e-21 Score=215.35 Aligned_cols=177 Identities=20% Similarity=0.242 Sum_probs=153.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+.. ..+...++++..|.++.++.||++|+++++++++++ ++
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGAS-VYTCSRNQK---ELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 83 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 888888742 233445556666888999999999999999999998 66
Q ss_pred c-CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 L-GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~-g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+ +++|+||||||+....++.+++.++|++++++|+.|++++.+++.+.+ ...+.||++||.++..+.++++.|+++|
T Consensus 84 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 163 (260)
T 2ae2_A 84 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK 163 (260)
T ss_dssp TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred cCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHH
Confidence 8 899999999999888889999999999999999999999999886654 2357999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++++|++..+.+ |....+|..|.+
T Consensus 164 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 192 (260)
T 2ae2_A 164 GAMDQLTRCLAFEWAKDNIRVNGVGPGVI 192 (260)
T ss_dssp HHHHHHHHHHHHHTGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEecCCC
Confidence 9999999988776 566667776655
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=6.9e-21 Score=217.66 Aligned_cols=179 Identities=18% Similarity=0.233 Sum_probs=156.2
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+.. ..+...++++..|.++.++.||++|+++++++++++ +
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 94 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGAR-VYTCSRNEK---ELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH 94 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 35799999999999999999999999997 888899742 233445556666888999999999999999999998 6
Q ss_pred hc-CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KL-GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~-g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
.+ ++||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++
T Consensus 95 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 174 (273)
T 1ae1_A 95 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSAS 174 (273)
T ss_dssp HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHH
Confidence 68 8999999999998888999999999999999999999999998866542 35899999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++++|++..+.+ |....+|..|.+.
T Consensus 175 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 205 (273)
T 1ae1_A 175 KGAINQMTKSLACEWAKDNIRVNSVAPGVIL 205 (273)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCc
Confidence 99999999988765 7777888887663
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.4e-21 Score=217.67 Aligned_cols=179 Identities=22% Similarity=0.227 Sum_probs=153.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC-CceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY-DVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~-G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+... ..+...++++.. |.++.++.||++|+++++++++++ +
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 79 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGAD-IVLNGFGDAA--EIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVR 79 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEECCSCHH--HHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCE-EEEEeCCcch--HHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999997 8888887532 023333444433 677889999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++|
T Consensus 80 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 159 (260)
T 1x1t_A 80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAK 159 (260)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHH
Confidence 799999999999998888999999999999999999999999998866542 358999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |+...+|..|.+.
T Consensus 160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 189 (260)
T 1x1t_A 160 HGVVGFTKVTALETAGQGITANAICPGWVR 189 (260)
T ss_dssp HHHHHHHHHHHHHHTTTTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHhccCCEEEEEEeecCcc
Confidence 9999999988766 6667777777653
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=7.7e-21 Score=224.12 Aligned_cols=180 Identities=14% Similarity=0.070 Sum_probs=155.8
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccH----HHHHHHHHHhcCCceEEEEeccCCCHHHHHHHH
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNG----YQALRIKIWKSYDVQVLISTDDITTEAGVVNLL 853 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~----~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~ 853 (1392)
-..++++|||||++|||+++|++|+++|++ |++++|+....+ ......++++..|.++.++.||++|++++++++
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~-Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~ 120 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGAN-IVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV 120 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCE-EEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCCE-EEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 346899999999999999999999999997 888899865321 123445566778899999999999999999999
Q ss_pred HHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC--CCeEEEecccccccC--CCCC
Q psy1119 854 TEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT--LGQFVVFSSVSCGRG--NAGQ 928 (1392)
Q Consensus 854 ~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~--l~~fV~~SS~s~~~G--~~gq 928 (1392)
+++ +++|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+++.+ .++||++||.++..+ .+++
T Consensus 121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~ 200 (346)
T 3kvo_A 121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQH 200 (346)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSS
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCc
Confidence 998 67999999999999999999999999999999999999999999998776543 479999999999888 7899
Q ss_pred hhHHHHHHHHHHHHHHHHHc---CCCeEEEEcc
Q psy1119 929 TNYGMANSIMERICEARRAE---GLPGLAVEWG 958 (1392)
Q Consensus 929 ~~Yaaana~ld~la~~r~~~---Glp~~ai~~g 958 (1392)
+.|+++|+++++|++..+.+ |+.+.+|..|
T Consensus 201 ~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG 233 (346)
T 3kvo_A 201 CAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPK 233 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECS
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 99999999999999998876 4445566555
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.2e-21 Score=224.40 Aligned_cols=178 Identities=16% Similarity=0.140 Sum_probs=154.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCc--eEEEEeccCCCHHHHHHHHHHH-
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDV--QVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~--~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+... .+...++++..|. ++.++.||+++.++++++++.+
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~-Vv~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCK-VAIADIRQDS---IDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCE-EEEEECCHHH---HHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 5789999999999999999999999997 8889998533 3333444444444 8999999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--------CCCeEEEecccccccCCCCC
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--------TLGQFVVFSSVSCGRGNAGQ 928 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--------~l~~fV~~SS~s~~~G~~gq 928 (1392)
+.+|+||+||||||+....++.+.+.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.+++
T Consensus 83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~ 162 (319)
T 3ioy_A 83 ARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSP 162 (319)
T ss_dssp HHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSS
T ss_pred HhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCC
Confidence 6789999999999999999999999999999999999999999998866542 35789999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 929 TNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 929 ~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+.|+++|+++++|++..+.+ |+...+|+.|.+.
T Consensus 163 ~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~ 199 (319)
T 3ioy_A 163 GIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVK 199 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEc
Confidence 99999999998888876544 7888888888774
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.4e-21 Score=219.98 Aligned_cols=176 Identities=17% Similarity=0.154 Sum_probs=149.6
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+.. ..++..+++ +.++.+++||++|+++++++++++ +
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~---~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~ 98 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYG-VALAGRRLD---ALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVE 98 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHH---HHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999997 888888742 222333333 467888999999999999999998 6
Q ss_pred hcCCccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC----CCeEEEecccccccCCCCChhHH
Q psy1119 858 KLGPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT----LGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~----l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
++|+||+||||||+... .++.+++.++|++++++|+.|++++.+++.+.+.+ .+.||++||+++..+.++++.|+
T Consensus 99 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~ 178 (272)
T 4dyv_A 99 KFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYT 178 (272)
T ss_dssp HHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHH
T ss_pred HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHH
Confidence 79999999999999755 78999999999999999999999999988665532 47999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++|+++++|++..+.+ |....+|..|.+.
T Consensus 179 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 211 (272)
T 4dyv_A 179 ATKHAITGLTKSTSLDGRVHDIACGQIDIGNAD 211 (272)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHhCccCEEEEEEEECccc
Confidence 9999999999988766 6666777776653
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=6.2e-21 Score=216.73 Aligned_cols=178 Identities=19% Similarity=0.207 Sum_probs=154.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+. +..+...++++..|.++.++.||++|+++++++++++ +.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTA-IALLDMNR---EALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCH---HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 88888874 2233445566667888999999999999999999998 67
Q ss_pred cCCccEEEECcccC-CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~-~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+|+||+||||||+. ...++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++|
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 161 (262)
T 1zem_A 82 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSK 161 (262)
T ss_dssp HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHH
Confidence 99999999999988 778899999999999999999999999998866542 357999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |..+.+|..|.+.
T Consensus 162 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~ 191 (262)
T 1zem_A 162 GAIIALTETAALDLAPYNIRVNAISPGYMG 191 (262)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHhhCeEEEEEecCCcC
Confidence 9999999987755 6777788877653
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.5e-21 Score=220.32 Aligned_cols=179 Identities=16% Similarity=0.163 Sum_probs=156.5
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
..++++|||||++|||+++|+.|+++|++ |++++|+...... ..++++..|.++..+.||++|.++++++++.+.+
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 106 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAH-VILHGVKPGSTAA---VQQRIIASGGTAQELAGDLSEAGAGTDLIERAEA 106 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSTTTTHH---HHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEcCCHHHHHH---HHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999997 8888998654433 3445566788999999999999999999999855
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
.++||++|||||+....++.+++.++|++++++|+.|++++.+++.+.+ ...+.||++||+++..+.++.+.|+++|+
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 186 (275)
T 4imr_A 107 IAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKA 186 (275)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHH
Confidence 5999999999999999999999999999999999999999999886654 24589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |..+.+|..|.+.
T Consensus 187 a~~~l~~~la~e~~~~gI~vn~v~PG~v~ 215 (275)
T 4imr_A 187 AQHNLIQSQARDFAGDNVLLNTLAPGLVD 215 (275)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred HHHHHHHHHHHHhcccCcEEEEEEecccc
Confidence 999999988876 6667777777663
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-20 Score=213.31 Aligned_cols=213 Identities=17% Similarity=0.145 Sum_probs=167.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+.. ..+.+. ..++..+.||++|.++++++++++ +.
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~-------~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGHP-LLLLARRVE-------RLKALN--LPNTLCAQVDVTDKYTFDTAITRAEKI 84 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCHH-------HHHTTC--CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHH-------HHHHhh--cCCceEEEecCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 888888731 112222 225788899999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|+||+||||||+....++.+.+.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++|+
T Consensus 85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~ 164 (266)
T 3p19_A 85 YGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKF 164 (266)
T ss_dssp HCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHH
Confidence 99999999999999899999999999999999999999999988765542 4589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccCccccccchhhhh--HHH---HHcCccccchhhhHHHHHHHHccCCCe
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVGEVGLVADMAEDN--LEV---VIGGTLQQRISNCLECLNEFLIQSEPI 1003 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~~~G~~~~~~~~~--~~~---~~~g~~~~~~~~~l~~l~~~l~~~~~~ 1003 (1392)
++++|++..+.+ |..+.+|..|.+..- +........ ... ...-.....++++.+.+-.++..+...
T Consensus 165 a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~-~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~~ 239 (266)
T 3p19_A 165 AVHAISENVREEVAASNVRVMTIAPSAVKTE-LLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQNV 239 (266)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBSSS-GGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTTE
T ss_pred HHHHHHHHHHHHhcccCcEEEEEeeCccccc-hhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCCc
Confidence 999999988776 788888988877542 322211110 000 001111345667777777777666553
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5e-21 Score=215.74 Aligned_cols=176 Identities=16% Similarity=0.176 Sum_probs=151.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+.. +..++ .++..|.++.++.||++|+++++++++++ ++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~--~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGAD-IAIADLVPA--PEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST 79 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCC--HHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEcCCch--hHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 888888751 11111 34455778999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+++||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++|+
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 159 (249)
T 2ew8_A 80 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKA 159 (249)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHH
Confidence 89999999999998888999999999999999999999999998766542 3589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |....+|..|.+.
T Consensus 160 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 188 (249)
T 2ew8_A 160 ANIGFTRALASDLGKDGITVNAIAPSLVR 188 (249)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCC-
T ss_pred HHHHHHHHHHHHHHhcCcEEEEEecCcCc
Confidence 999999988765 6777788777653
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8.6e-21 Score=214.61 Aligned_cols=175 Identities=21% Similarity=0.209 Sum_probs=152.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+.. ....++++..|.++.++.||++|+++++++++++ ++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~-V~~~~r~~~-----~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 76 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGAN-IVLNGFGDP-----APALAEIARHGVKAVHHPADLSDVAQIEALFALAERE 76 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEECSSCC-----HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCch-----HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999997 888888753 2234455566788999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|++|+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++|+
T Consensus 77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 156 (255)
T 2q2v_A 77 FGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKH 156 (255)
T ss_dssp HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHH
Confidence 99999999999998888899999999999999999999999988765542 3479999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++++|++..+.+ |+...+|..|.+
T Consensus 157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v 184 (255)
T 2q2v_A 157 GVVGLTKVVGLETATSNVTCNAICPGWV 184 (255)
T ss_dssp HHHHHHHHHHHHTTTSSEEEEEEEESSB
T ss_pred HHHHHHHHHHHHhcccCcEEEEEeeCCC
Confidence 999999998876 455666666655
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=9.1e-21 Score=213.51 Aligned_cols=173 Identities=16% Similarity=0.219 Sum_probs=148.8
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g 860 (1392)
+++|||||+||||+++|+.|+++|++ |++++|+.. ..+...+++ +.++.++.||++|+++++++++++ +++|
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~---~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 73 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHK-VIATGRRQE---RLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWC 73 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 57999999999999999999999997 888888742 222233333 346888999999999999999998 6789
Q ss_pred CccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 861 PVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 861 ~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+||+||||||+.. ..++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++|++
T Consensus 74 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 153 (248)
T 3asu_A 74 NIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAF 153 (248)
T ss_dssp CCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHH
Confidence 9999999999873 67889999999999999999999999998866542 45899999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++|++..+.+ |..+.+|..|.+.
T Consensus 154 ~~~~~~~la~e~~~~gi~v~~v~PG~v~ 181 (248)
T 3asu_A 154 VRQFSLNLRTDLHGTAVRVTDIEPGLVG 181 (248)
T ss_dssp HHHHHHHHHHHTTTSCCEEEEEEECSBC
T ss_pred HHHHHHHHHHHhhhcCcEEEEEeccccc
Confidence 99999988766 6777888888775
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-20 Score=210.48 Aligned_cols=211 Identities=17% Similarity=0.069 Sum_probs=166.4
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHh-cCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK-SYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~-~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++|||||+||||+++|++|+++|++ |++++|+... .+...+++. ..|.++.++.||++|+++++++++++ ++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYA-LALGARSVDR---LEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLER 77 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHh
Confidence 589999999999999999999999997 8888998432 223333333 45788999999999999999999988 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+++. ..+.+|++||.++..+.++.+.|+++|++
T Consensus 78 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa 157 (235)
T 3l77_A 78 FGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWA 157 (235)
T ss_dssp HSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHH
T ss_pred cCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHH
Confidence 89999999999999999999999999999999999999999998876542 35789999999999999999999999999
Q ss_pred HHHHHHHHHHc--CCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccCC
Q psy1119 938 MERICEARRAE--GLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSE 1001 (1392)
Q Consensus 938 ld~la~~r~~~--Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~ 1001 (1392)
+++|++....+ |....+|..|.+.. .+......... ......++++.+.+..++..+.
T Consensus 158 ~~~~~~~l~~~~~~i~v~~v~PG~v~T-~~~~~~~~~~~-----~~~~~~p~dva~~v~~l~~~~~ 217 (235)
T 3l77_A 158 ARALVRTFQIENPDVRFFELRPGAVDT-YFGGSKPGKPK-----EKGYLKPDEIAEAVRCLLKLPK 217 (235)
T ss_dssp HHHHHHHHHHHCTTSEEEEEEECSBSS-STTTCCSCCCG-----GGTCBCHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHhhcCCCeEEEEEeCCcccc-ccccccCCccc-----ccCCCCHHHHHHHHHHHHcCCC
Confidence 99999987443 67778888887643 23221111100 0123456667777766665543
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=9.2e-21 Score=217.11 Aligned_cols=178 Identities=20% Similarity=0.178 Sum_probs=153.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+.. ..+...++++..|.++.++.||++|+++++++++++ +
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGLR-VFVCARGEE---GLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVE 95 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 35799999999999999999999999997 888888742 233344556666788999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhh--CC--CCCeEEEecccccccCCCCChhHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTM--CP--TLGQFVVFSSVSCGRGNAGQTNYGM 933 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~--~~--~l~~fV~~SS~s~~~G~~gq~~Yaa 933 (1392)
++|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+. +. ..+.||++||+++..+.++++.|++
T Consensus 96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a 175 (277)
T 2rhc_B 96 RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSA 175 (277)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHH
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHH
Confidence 7999999999999988888999999999999999999999999988654 31 3479999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+|+++++|++..+.+ |+.+.+|..|.+
T Consensus 176 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v 206 (277)
T 2rhc_B 176 SKHGVVGFTKALGLELARTGITVNAVCPGFV 206 (277)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEEEECSB
T ss_pred HHHHHHHHHHHHHHHHHHhCcEEEEEecCcC
Confidence 999999999988766 555667776655
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=217.95 Aligned_cols=178 Identities=12% Similarity=0.119 Sum_probs=152.2
Q ss_pred CCCCeEEEEcCcc--hHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLG--GFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 779 ~~~~~ylItGG~g--GiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
..+|++|||||+| |||+++|+.|+++|++ |++++|+.. ..+..+++...+.++.++.||++|.++++++++++
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~-V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAE-LAFTYQGDA----LKKRVEPLAEELGAFVAGHCDVADAASIDAVFETL 103 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCE-EEEEECSHH----HHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE-EEEEcCCHH----HHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHH
Confidence 5689999999995 5999999999999997 888888732 12222333222336788999999999999999998
Q ss_pred -hhcCCccEEEECcccCC----CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhH
Q psy1119 857 -NKLGPVDGIFNLAVVLK----DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~----d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
+++|+||++|||||+.. ..++.+.+.++|++++++|+.|++++.+++.+++.+.+.||++||.++..+.++++.|
T Consensus 104 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y 183 (293)
T 3grk_A 104 EKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVM 183 (293)
T ss_dssp HHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTTHH
T ss_pred HHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchHHH
Confidence 67999999999999986 5788999999999999999999999999998877677899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 932 GMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 932 aaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++|+++++|++..+.+ |+.+.+|..|.+.
T Consensus 184 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 217 (293)
T 3grk_A 184 GVAKAALEASVKYLAVDLGPQNIRVNAISAGPIK 217 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCc
Confidence 99999999999988776 6667777777664
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=213.22 Aligned_cols=175 Identities=17% Similarity=0.193 Sum_probs=152.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.. ..++..+++ |.++.++.||++|+++++++++.+ ++
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAK-VAFSDINEA---AGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRR 77 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEECSCHH---HHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 888888742 222233333 567889999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..++||++||+++..+.++++.|+++|++
T Consensus 78 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 157 (253)
T 1hxh_A 78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAA 157 (253)
T ss_dssp HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCCCCccHHHHHHH
Confidence 99999999999998888999999999999999999999999988766543 23899999999999999999999999999
Q ss_pred HHHHHHHHHHc------CCCeEEEEccccC
Q psy1119 938 MERICEARRAE------GLPGLAVEWGAVG 961 (1392)
Q Consensus 938 ld~la~~r~~~------Glp~~ai~~g~~~ 961 (1392)
+++|++..+.+ |++..+|..|.+.
T Consensus 158 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~ 187 (253)
T 1hxh_A 158 VSALTRAAALSCRKQGYAIRVNSIHPDGIY 187 (253)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEESEEC
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEEEeCCcc
Confidence 99999988766 7888888887763
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-20 Score=215.12 Aligned_cols=179 Identities=15% Similarity=0.144 Sum_probs=152.8
Q ss_pred cCCCCeEEEEcCcc--hHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Q psy1119 778 ADSNKSYIICGGLG--GFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 778 ~~~~~~ylItGG~g--GiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
...++++|||||+| |||+++|+.|+++|++ |++++|+....+...... +..| .+.+++||++|++++++++++
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~-V~~~~r~~~~~~~~~~~~---~~~~-~~~~~~~Dv~d~~~v~~~~~~ 101 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAE-VALTYLSETFKKRVDPLA---ESLG-VKLTVPCDVSDAESVDNMFKV 101 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHH---HHHT-CCEEEECCTTCHHHHHHHHHH
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHH---HhcC-CeEEEEcCCCCHHHHHHHHHH
Confidence 34689999999997 9999999999999997 888899853222222222 2223 357889999999999999999
Q ss_pred H-hhcCCccEEEECcccCCC----ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChh
Q psy1119 856 A-NKLGPVDGIFNLAVVLKD----ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTN 930 (1392)
Q Consensus 856 ~-~~~g~I~gvi~~Agv~~d----~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~ 930 (1392)
+ +++|+||++|||||+... .++.+++.++|++++++|+.|++++.+++.+.+.+.+.||++||+++..+.++++.
T Consensus 102 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~~~ 181 (296)
T 3k31_A 102 LAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYNV 181 (296)
T ss_dssp HHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTTH
T ss_pred HHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCchh
Confidence 8 679999999999999865 78899999999999999999999999999887766789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 931 YGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 182 Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~ 216 (296)
T 3k31_A 182 MGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVR 216 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCC
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCc
Confidence 999999999999988766 6667777777664
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=7.6e-21 Score=218.84 Aligned_cols=180 Identities=14% Similarity=0.083 Sum_probs=155.3
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcc---------cHHHHHHHHHHhcCCceEEEEeccCCCHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVK---------NGYQALRIKIWKSYDVQVLISTDDITTEAGV 849 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~---------~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v 849 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+... ....+....+++..|.++.++.||++|.+++
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGAD-IILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 46899999999999999999999999997 8888876211 2233344455667788999999999999999
Q ss_pred HHHHHHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC---
Q psy1119 850 VNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN--- 925 (1392)
Q Consensus 850 ~~l~~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~--- 925 (1392)
+++++++ +++|+||+||||||+.... + +++.++|++++++|+.|++++.+++.+++.+.+.||++||+++..+.
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~-~-~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 164 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLG-A-HLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQP 164 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCC-T-TCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCccc-C-cCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccc
Confidence 9999998 6799999999999987665 3 38999999999999999999999998877677899999999998877
Q ss_pred --------CCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 926 --------AGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 926 --------~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++.|+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 165 ~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~ 212 (287)
T 3pxx_A 165 PGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVN 212 (287)
T ss_dssp C-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBS
T ss_pred ccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence 78899999999999999988877 7888889888774
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-20 Score=211.38 Aligned_cols=180 Identities=17% Similarity=0.139 Sum_probs=156.6
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||++|||+++|++|+++|++.+++..|+. +..++..++++..+.++..+.+|+++.++++++++.+ +
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRK---EEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDN 81 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCS---HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCch---HHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHH
Confidence 36799999999999999999999999998555456664 3344556667778889999999999999999999887 3
Q ss_pred hc------CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhH
Q psy1119 858 KL------GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 858 ~~------g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
.+ ++||++|||||+.....+.+.+.++|++++++|+.|++++.+++.+.+.+.++||++||.++..+.++++.|
T Consensus 82 ~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y 161 (255)
T 3icc_A 82 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAY 161 (255)
T ss_dssp HHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTBHHH
T ss_pred HhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCcchh
Confidence 34 469999999999989999999999999999999999999999987765556799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 932 GMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 932 aaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++|+++++|++..+.+ |....++..|.+.
T Consensus 162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 195 (255)
T 3icc_A 162 SMTKGAINTMTFTLAKQLGARGITVNAILPGFVK 195 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred HHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeec
Confidence 99999999999988765 7788888888764
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.85 E-value=8.8e-21 Score=221.91 Aligned_cols=181 Identities=22% Similarity=0.195 Sum_probs=153.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCc--ccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGV--KNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~--~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
.++++|||||+||||+++|+.|+++|++ |+++.|+.. .....+...+.++..|.++.++.||++|+++++++++++
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~~~G~~-V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~ 82 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALAGAGHR-VYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII 82 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 4689999999999999999999999997 777777522 122233344445556788999999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccC-CCCChhHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRG-NAGQTNYGM 933 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G-~~gq~~Yaa 933 (1392)
+++|+||+||||||+...+++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+ .++++.|++
T Consensus 83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~a 162 (324)
T 3u9l_A 83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFA 162 (324)
T ss_dssp HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHHH
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHHH
Confidence 6799999999999999999999999999999999999999999998866542 4589999999999865 477899999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+|+++++|++..+.+ |+.+.+|..|.+.
T Consensus 163 sKaa~~~~~~~la~el~~~gI~v~~v~PG~v~ 194 (324)
T 3u9l_A 163 AKAAMDAIAVQYARELSRWGIETSIIVPGAFT 194 (324)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEECCccc
Confidence 999999999998876 7778888888763
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-20 Score=214.20 Aligned_cols=178 Identities=18% Similarity=0.156 Sum_probs=153.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC-CceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY-DVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~-G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+... .+...++++.. |.++.++.||++|+++++++++++ +
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAH-IVLVARQVDR---LHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS 81 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCHHH---HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 5789999999999999999999999996 8888887422 22333444433 678889999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|++|+||||||+....++.+.+.++|++.+++|+.|++++.+++.+.+. ..+.||++||+++..+.++.+.|+++|
T Consensus 82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 161 (263)
T 3ai3_A 82 SFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTK 161 (263)
T ss_dssp HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHH
Confidence 789999999999998888999999999999999999999999998866542 358999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |+...+|..|.+.
T Consensus 162 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 191 (263)
T 3ai3_A 162 AALMMFSKTLATEVIKDNIRVNCINPGLIL 191 (263)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEecCccc
Confidence 9999999988765 7777888877653
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=5.2e-21 Score=218.17 Aligned_cols=182 Identities=17% Similarity=0.156 Sum_probs=152.8
Q ss_pred cccCCCCeEEEEcCc--chHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHH
Q psy1119 776 YYADSNKSYIICGGL--GGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLL 853 (1392)
Q Consensus 776 ~~~~~~~~ylItGG~--gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~ 853 (1392)
....+++++|||||+ ||||+++|++|+++|++ |++++|+....+ .++++...+.++.++.||++|++++++++
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~-V~~~~r~~~~~~----~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAE-LAFTYVGDRFKD----RITEFAAEFGSELVFPCDVADDAQIDALF 83 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCE-EEEEESSGGGHH----HHHHHHHHTTCCCEEECCTTCHHHHHHHH
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCC-EEEEecchhhHH----HHHHHHHHcCCcEEEECCCCCHHHHHHHH
Confidence 345688999999999 99999999999999996 888888842222 22333222335788999999999999999
Q ss_pred HHH-hhcCCccEEEECcccCCC----ccccC-CCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC
Q psy1119 854 TEA-NKLGPVDGIFNLAVVLKD----ALFEN-QTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG 927 (1392)
Q Consensus 854 ~~~-~~~g~I~gvi~~Agv~~d----~~~~~-~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g 927 (1392)
+++ +++|+||+||||||+... ..+.+ ++.++|+..+++|+.|++++.+++.+++.+.+.||++||.++..+.++
T Consensus 84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~ 163 (271)
T 3ek2_A 84 ASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPN 163 (271)
T ss_dssp HHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT
T ss_pred HHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCC
Confidence 998 679999999999998765 45555 999999999999999999999998776655679999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 928 QTNYGMANSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 928 q~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
++.|+++|+++++|++..+.+ |..+.+|..|.+..
T Consensus 164 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T 202 (271)
T 3ek2_A 164 YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKT 202 (271)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC--
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccc
Confidence 999999999999999988765 78888888887743
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-20 Score=212.37 Aligned_cols=213 Identities=18% Similarity=0.183 Sum_probs=162.9
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g 860 (1392)
+++|||||+||||+++|+.|+++|++ |++++|+.. ..+...++++.. .++.++.||++|+++++++++.+ +++|
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~-V~~~~r~~~---~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 96 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWS-LVLTGRREE---RLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEFA 96 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGGS
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHH---HHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 89999999999999999999999997 888898742 233334445443 57888999999999999999998 7799
Q ss_pred CccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCC-eEEEecccccccCCCCChhHHHHHH
Q psy1119 861 PVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLG-QFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~-~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+||+||||||+... .++.+++.++|++++++|+.|++++.+++.+.+. ..+ .||++||+++..+.++++.|+++|+
T Consensus 97 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKa 176 (272)
T 2nwq_A 97 TLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKA 176 (272)
T ss_dssp SCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHH
Confidence 99999999998764 8899999999999999999999999988866542 346 9999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccCccccccch-hhhh--HHHHHcCccccchhhhHHHHHHHHccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVGEVGLVADM-AEDN--LEVVIGGTLQQRISNCLECLNEFLIQS 1000 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~~~G~~~~~-~~~~--~~~~~~g~~~~~~~~~l~~l~~~l~~~ 1000 (1392)
++++|++..+.+ |+...+|.+|.+.. .+.... .... .........+..++++.+.+-.++..+
T Consensus 177 a~~~l~~~la~el~~~gIrvn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~ 246 (272)
T 2nwq_A 177 FVEQFSLNLRCDLQGTGVRVTNLEPGLCES-EFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQP 246 (272)
T ss_dssp HHHHHHHHHHTTCTTSCCEEEEEEECSBC---------------------CCCCBCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHhCccCeEEEEEEcCCCcC-cchhcccccchHHHHHhhccCCCCCHHHHHHHHHHHhCCC
Confidence 999999998866 67778888887643 222110 0000 000111223456666666666665543
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-20 Score=217.12 Aligned_cols=179 Identities=22% Similarity=0.226 Sum_probs=154.6
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCc---eEEEEeccCCCHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDV---QVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~---~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+.. ..+...++++..|. ++.++.||++|++++++++++
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~-V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 99 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQ-VTITGRNED---RLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT 99 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHH
Confidence 46799999999999999999999999997 888898742 23334455555565 789999999999999999999
Q ss_pred H-hhcCCccEEEECcccCCCcc--ccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCC-CCChh
Q psy1119 856 A-NKLGPVDGIFNLAVVLKDAL--FENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGN-AGQTN 930 (1392)
Q Consensus 856 ~-~~~g~I~gvi~~Agv~~d~~--~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~-~gq~~ 930 (1392)
+ +++|+||+||||||+....+ +.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+. ++++.
T Consensus 100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~~ 179 (297)
T 1xhl_A 100 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPY 179 (297)
T ss_dssp HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHH
T ss_pred HHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCCCCcch
Confidence 8 67999999999999887777 99999999999999999999999998866542 22899999999999998 99999
Q ss_pred HHHHHHHHHHHHHHHHH----cCCCeEEEEccccC
Q psy1119 931 YGMANSIMERICEARRA----EGLPGLAVEWGAVG 961 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~----~Glp~~ai~~g~~~ 961 (1392)
|+++|+++++|++..+. .|+.+.+|..|.+.
T Consensus 180 Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~ 214 (297)
T 1xhl_A 180 YACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVA 214 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCc
Confidence 99999999999998775 48888899888764
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-20 Score=212.11 Aligned_cols=179 Identities=19% Similarity=0.156 Sum_probs=153.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+.. ..+...++++..|.++..+.||++|.++++++++++ +
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQDGAH-VVVSSRKQE---NVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVN 87 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 35799999999999999999999999996 888888742 233344556666888999999999999999999998 6
Q ss_pred hcCCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KLGPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
.+|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.+.+ ...+.||++||.++..+.++++.|+++
T Consensus 88 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 167 (260)
T 2zat_A 88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVS 167 (260)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHH
Confidence 7899999999999864 4788999999999999999999999999886654 245799999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++++|++..+.+ |+...++..|.+.
T Consensus 168 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 198 (260)
T 2zat_A 168 KTALLGLTKNLAVELAPRNIRVNCLAPGLIK 198 (260)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEEECccc
Confidence 99999999988766 6777777777653
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4e-20 Score=210.40 Aligned_cols=179 Identities=15% Similarity=0.174 Sum_probs=153.3
Q ss_pred CCCeEEEEcCc--chHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCc-eEEEEeccCCCHHHHHHHHHHH
Q psy1119 780 SNKSYIICGGL--GGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDV-QVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 780 ~~~~ylItGG~--gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~-~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
.++++|||||+ +|||+++|++|+++|++ |++++|+....+... +..+..+. ++.++.||++|.++++++++++
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 81 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGAR-LIFTYAGERLEKSVH---ELAGTLDRNDSIILPCDVTNDAEIETCFASI 81 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCE-EEEEESSGGGHHHHH---HHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCE-EEEecCchHHHHHHH---HHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence 57899999999 56999999999999997 888888743222222 22233343 7889999999999999999998
Q ss_pred -hhcCCccEEEECcccCC----CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhH
Q psy1119 857 -NKLGPVDGIFNLAVVLK----DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~----d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
+++|+||++|||||+.. ...+.+++.++|...+++|+.|++++.+++.+++.+.+.||++||+++..+.++++.|
T Consensus 82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 161 (266)
T 3oig_A 82 KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNVM 161 (266)
T ss_dssp HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTHHH
T ss_pred HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCcchh
Confidence 67899999999999876 5788999999999999999999999999998877767899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 932 GMANSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 932 aaana~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
+++|+++++|++..+.+ |..+.+|..|.+..
T Consensus 162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T 196 (266)
T 3oig_A 162 GVAKASLDASVKYLAADLGKENIRVNSISAGPIRT 196 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCS
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccc
Confidence 99999999999988776 67778888877643
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=211.11 Aligned_cols=178 Identities=21% Similarity=0.239 Sum_probs=152.2
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
++++|||||+||||+++|++|+++|++.+++.+|+... .+...++++..|.++.++.||+++.++++++++++ +++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKA---AEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW 77 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999844446787422 23334445555778999999999999999999998 679
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+++|+||||||+....++.+.+.++|++.+++|+.|++++.+++.+.+. ..++||++||.++..+.++++.|+++|++
T Consensus 78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 157 (244)
T 1edo_A 78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAG 157 (244)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHH
Confidence 9999999999999888999999999999999999999999998866542 45899999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++.|++..+.+ |++..++.+|.+.
T Consensus 158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 185 (244)
T 1edo_A 158 VIGFSKTAAREGASRNINVNVVCPGFIA 185 (244)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHhhhcCCEEEEEeeCccc
Confidence 99999987765 7778888887764
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=216.06 Aligned_cols=178 Identities=16% Similarity=0.156 Sum_probs=153.5
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+.. ..++..++++..| ++.++.||++|+++++++++++ +
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~~-V~~~~r~~~---~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGAR-VFICARDAE---ACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGE 101 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEECSCHH---HHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999997 888888742 2334445566556 7888999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CC----CeEEEecccccccCCCCCh-h
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TL----GQFVVFSSVSCGRGNAGQT-N 930 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l----~~fV~~SS~s~~~G~~gq~-~ 930 (1392)
.+++||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. .. +.||++||+++..+.++++ .
T Consensus 102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~ 181 (276)
T 2b4q_A 102 LSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYA 181 (276)
T ss_dssp HCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTT
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccc
Confidence 789999999999998888999999999999999999999999988765442 22 7999999999999999999 9
Q ss_pred HHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 931 YGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 182 Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~ 216 (276)
T 2b4q_A 182 YGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFP 216 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred cHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCc
Confidence 999999999999988765 6777788877663
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=215.44 Aligned_cols=178 Identities=17% Similarity=0.122 Sum_probs=149.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecC-CCcccHHHHHHHHHHhcC-CceEEEEeccCCCH----HHHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSR-SGVKNGYQALRIKIWKSY-DVQVLISTDDITTE----AGVVNLL 853 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sR-s~~~~~~~~~~~~~l~~~-G~~v~~~~~Dv~~~----~~v~~l~ 853 (1392)
.++++|||||+||||+++|++|+++|++ |++++| +. +..+...++++.. |.++.++.||++|. +++++++
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 85 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGFR-VVVHYRHSE---GAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDII 85 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCH---HHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCCh---HHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHH
Confidence 5789999999999999999999999997 888888 53 2223334444443 67889999999999 9999999
Q ss_pred HHH-hhcCCccEEEECcccCCCccccCCCH-----------HHHHHHHhhHhHHHHHHHHHHhhhCC-CC------CeEE
Q psy1119 854 TEA-NKLGPVDGIFNLAVVLKDALFENQTP-----------EDFNASLGPKANATKYFDKYSRTMCP-TL------GQFV 914 (1392)
Q Consensus 854 ~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~-----------e~~~~~~~~kv~g~~~L~~~~~~~~~-~l------~~fV 914 (1392)
+++ +++|+||+||||||+....++.+++. ++|++++++|+.|++++.+++.+.+. .. +.||
T Consensus 86 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv 165 (276)
T 1mxh_A 86 DCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVV 165 (276)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEE
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEE
Confidence 988 67999999999999988888999999 99999999999999999998877653 33 7999
Q ss_pred EecccccccCCCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 915 VFSSVSCGRGNAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 915 ~~SS~s~~~G~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++||+++..+.++++.|+++|+++++|++..+.+ |+.+.+|..|.+.
T Consensus 166 ~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~ 216 (276)
T 1mxh_A 166 NLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSL 216 (276)
T ss_dssp EECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred EECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccc
Confidence 9999999999999999999999999999988766 7778888888764
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=5.4e-20 Score=206.77 Aligned_cols=172 Identities=22% Similarity=0.233 Sum_probs=147.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.. ..+... +..| +.++.||++|+++++++++++ ++
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~---~~~~--~~~~~~D~~~~~~~~~~~~~~~~~ 74 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGAR-LVACDIEEG---PLREAA---EAVG--AHPVVMDVADPASVERGFAEALAH 74 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHH---HTTT--CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHH---HHcC--CEEEEecCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999997 888888732 122222 2234 667889999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||.+ ..|.++++.|+++|+
T Consensus 75 ~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~ 153 (245)
T 1uls_A 75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMA 153 (245)
T ss_dssp HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHH
Confidence 99999999999998888999999999999999999999999998876553 347999999999 889999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |....+|..|.+.
T Consensus 154 a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 182 (245)
T 1uls_A 154 GVVGLTRTLALELGRWGIRVNTLAPGFIE 182 (245)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHhHhCeEEEEEEeCcCc
Confidence 999999987765 6777888887663
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-20 Score=212.21 Aligned_cols=175 Identities=18% Similarity=0.168 Sum_probs=148.0
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCC-ceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGA-RKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GA-r~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++|||||++|||+++|++|+++|+ .+|++++|+.. ..+...++ .|.++.++.||++|+++++++++++ ++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~---~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEA---PLKKLKEK---YGDRFFYVVGDITEDSVLKQLVNAAVKG 75 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHH---HHHHHHHH---HGGGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHH---HHHHHHHH---hCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 57999999999999999999999975 35777888742 22222222 2668899999999999999999998 67
Q ss_pred cCCccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|+||++|||||+... .++.+++.++|++++++|+.|++++.+++.+++. ..+.||++||.++..+.++++.|+++|+
T Consensus 76 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 155 (254)
T 3kzv_A 76 HGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKA 155 (254)
T ss_dssp HSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCCSHHHHHHHH
T ss_pred cCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCCcchHHHHHH
Confidence 9999999999998654 8899999999999999999999999998865542 2389999999999999999999999999
Q ss_pred HHHHHHHHHHHc--CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE--GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~--Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |..+.+|..|.+.
T Consensus 156 a~~~~~~~la~e~~~i~vn~v~PG~v~ 182 (254)
T 3kzv_A 156 ALNHFAMTLANEERQVKAIAVAPGIVD 182 (254)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEECSSCC
T ss_pred HHHHHHHHHHhhccCcEEEEEeCCccc
Confidence 999999998876 5556777777653
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-20 Score=208.74 Aligned_cols=212 Identities=19% Similarity=0.163 Sum_probs=168.3
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCc------eEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHH
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGAR------KLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLT 854 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr------~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~ 854 (1392)
++++|||||+||||+++|++|+++|++ +|++++|+. ...+...++++..|.++.++.||++|+++++++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 78 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA---ADLEKISLECRAEGALTDTITADISDMADVRRLTT 78 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH---HHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCH---HHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHH
Confidence 578999999999999999999999994 588889874 22334445566668889999999999999999999
Q ss_pred HH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhH
Q psy1119 855 EA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 855 ~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
++ +.++++|+||||||+....++.+.+.++|++.+++|+.|++++.+++.+++ ...++||++||.++..+.++.+.|
T Consensus 79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y 158 (244)
T 2bd0_A 79 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIY 158 (244)
T ss_dssp HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred HHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchh
Confidence 98 678999999999999988899999999999999999999999999886644 245899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH----cCCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccCCC
Q psy1119 932 GMANSIMERICEARRA----EGLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEP 1002 (1392)
Q Consensus 932 aaana~ld~la~~r~~----~Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~~ 1002 (1392)
+++|+++++|++..+. .|++..++..|.+..- +........ ......++++.+.+-.++..+..
T Consensus 159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~-~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~ 226 (244)
T 2bd0_A 159 CMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTP-MWGKVDDEM------QALMMMPEDIAAPVVQAYLQPSR 226 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCST-TTCCCCSTT------GGGSBCHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccch-hhhhccccc------cccCCCHHHHHHHHHHHHhCCcc
Confidence 9999999999987665 4777888888876432 221111000 01234556666666666654433
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.3e-20 Score=214.09 Aligned_cols=178 Identities=24% Similarity=0.258 Sum_probs=153.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCc---eEEEEeccCCCHHHHHHHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDV---QVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~---~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+.. ..+...++++..|. ++.++.||++|+++++++++++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGAN-VTITGRSSE---RLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST 80 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHH
Confidence 5789999999999999999999999997 888888742 23334455555565 7899999999999999999998
Q ss_pred -hhcCCccEEEECcccCCCcc----ccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCC-CCCh
Q psy1119 857 -NKLGPVDGIFNLAVVLKDAL----FENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGN-AGQT 929 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d~~----~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~-~gq~ 929 (1392)
+++|+||+||||||+....+ +.+.+.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+. ++++
T Consensus 81 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 160 (280)
T 1xkq_A 81 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFL 160 (280)
T ss_dssp HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSH
T ss_pred HHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCCCccc
Confidence 67999999999999987777 88999999999999999999999998866542 22899999999999998 9999
Q ss_pred hHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 930 NYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
.|+++|+++++|++..+.+ |+.+.+|..|.+.
T Consensus 161 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 196 (280)
T 1xkq_A 161 YYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVE 196 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCc
Confidence 9999999999999988754 7888888888763
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-21 Score=227.69 Aligned_cols=202 Identities=16% Similarity=0.102 Sum_probs=141.0
Q ss_pred eeEeecC--CCccccccHHHHhhcCCceEEEecC------C-----CCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1159 TIFMVPG--IEGIATVLEPLAKNINAQVLVFQFD------H-----TNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1159 pLF~vp~--agG~~~~y~~La~~L~~~~~v~~l~------~-----e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
||||+|+ ++|+...|.+|+++|.....++.++ . +.+..+++++|++|++.|+..+ +.+||+|+||
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~~~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~--~~~p~~l~G~ 168 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAA--GDAPVVLLGH 168 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHH--TTSCEEEEEE
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcCCCCceEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHhc--CCCCEEEEEE
Confidence 9999998 7889999999999999888888876 2 4556899999999999998654 7899999999
Q ss_pred chhHHHHHHHHHHHHHc-CCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHHHHHHHh
Q psy1119 1226 SFGGMVALELAIKLEQL-GTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITS 1303 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~-G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 1303 (1392)
||||.||+|+|++|+++ |+.+ .|+++|++++.....+... .......++... ........+. .+.....+
T Consensus 169 S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~~~~~--~~~l~~~~~~~~--~~~~~~~~~~----~~~~~~~~ 240 (319)
T 2hfk_A 169 AGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVW--SRQLGEGLFAGE--LEPMSDARLL----AMGRYARF 240 (319)
T ss_dssp THHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHHHHHT--HHHHHHHHHHTC--SSCCCHHHHH----HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhHHHHH--HHHhhHHHHHhh--ccccchHHHH----HHHHHHHH
Confidence 99999999999999998 8888 8899999775432111000 000001111110 0011122121 11122233
Q ss_pred hccccCCCCCcccceEEEEeeCCCC-CCChh-hcCcccccCCCeEEEEEccCccccccChHHHHHHHhhhcccC
Q psy1119 1304 ILKYTDPKHKAFGGNITLLRPTEQA-LPTAE-DYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDSTDF 1375 (1392)
Q Consensus 1304 ~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~-~~~W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~~~L~ 1375 (1392)
...|.+. ++++|++++++ +|. ..... ...|.+++.+.++++.++|+|++|+.+ +...++..+...|.
T Consensus 241 ~~~~~~~---~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~~~~~~~~v~g~H~~~~~e-~~~~~~~~i~~~L~ 309 (319)
T 2hfk_A 241 LAGPRPG---RSSAPVLLVRA-SEPLGDWQEERGDWRAHWDLPHTVADVPGDHFTMMRD-HAPAVAEAVLSWLD 309 (319)
T ss_dssp HHSCCCC---CCCSCEEEEEE-SSCSSCCCGGGCCCSCCCSSCSEEEEESSCTTHHHHT-CHHHHHHHHHHHHH
T ss_pred HHhCCCC---CcCCCEEEEEc-CCCCCCccccccchhhcCCCCCEEEEeCCCcHHHHHH-hHHHHHHHHHHHHH
Confidence 3456553 79999999999 665 44444 678999988889999999999998844 34455555555554
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.6e-20 Score=211.68 Aligned_cols=174 Identities=20% Similarity=0.258 Sum_probs=146.5
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.. ..++.. +..+.++.++.||++|+++++++++++ ++
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~-V~~~~r~~~---~~~~~~---~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGAS-LVAVDREER---LLAEAV---AALEAEAIAVVADVSDPKAVEAVFAEALEE 77 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHH---HTCCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHH---HHhcCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999996 888888742 122222 223457888999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
+|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.++..+.||++||+++. |.++++.|+++|+++
T Consensus 78 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~Y~asK~a~ 156 (263)
T 2a4k_A 78 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFGLAHYAAGKLGV 156 (263)
T ss_dssp HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHHHHHHHHCSSHH
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCCcHHHHHHHHHH
Confidence 9999999999999988899999999999999999999999999987766336899999999998 889999999999999
Q ss_pred HHHHHHHHHc----CCCeEEEEccccC
Q psy1119 939 ERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 939 d~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++|++..+.+ |+...+|..|.+.
T Consensus 157 ~~~~~~la~e~~~~gi~v~~v~PG~v~ 183 (263)
T 2a4k_A 157 VGLARTLALELARKGVRVNVLLPGLIQ 183 (263)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEEECSBC
T ss_pred HHHHHHHHHHhhhhCcEEEEEEeCcCc
Confidence 9999987765 7778888888764
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.85 E-value=2.5e-20 Score=214.71 Aligned_cols=180 Identities=14% Similarity=0.120 Sum_probs=151.7
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHh-cCCceEEEEeccCCC----HHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK-SYDVQVLISTDDITT----EAGVVNLL 853 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~-~~G~~v~~~~~Dv~~----~~~v~~l~ 853 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+.. +..+...++++ ..|.++.++.||+++ ++++++++
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~G~~-V~~~~r~~~--~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~ 97 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQTGYR-VVIHYHNSA--EAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII 97 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHHTCE-EEEEESSCH--HHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCe-EEEEeCCch--HHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence 46799999999999999999999999997 888888751 22233344444 557789999999999 99999999
Q ss_pred HHH-hhcCCccEEEECcccCCCccc-----cC-----CCHHHHHHHHhhHhHHHHHHHHHHhhhCCC--------CCeEE
Q psy1119 854 TEA-NKLGPVDGIFNLAVVLKDALF-----EN-----QTPEDFNASLGPKANATKYFDKYSRTMCPT--------LGQFV 914 (1392)
Q Consensus 854 ~~~-~~~g~I~gvi~~Agv~~d~~~-----~~-----~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~--------l~~fV 914 (1392)
+++ +.+|+||+||||||+....++ .+ .+.++|++++++|+.|++++.+++.+.+.. .+.||
T Consensus 98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv 177 (288)
T 2x9g_A 98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV 177 (288)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence 998 678999999999999877777 67 899999999999999999999988776643 46999
Q ss_pred EecccccccCCCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 915 VFSSVSCGRGNAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 915 ~~SS~s~~~G~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++||+++..+.++++.|+++|+++++|++..+.+ |+.+.+|..|.+.
T Consensus 178 ~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 228 (288)
T 2x9g_A 178 NLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSL 228 (288)
T ss_dssp EECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCS
T ss_pred EEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEecccc
Confidence 9999999999999999999999999999988766 7777888887663
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-20 Score=211.15 Aligned_cols=174 Identities=24% Similarity=0.218 Sum_probs=149.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+.. ..+...+ ..|.++.++.||++++++++++++++ ++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGAR-VVLADVLDE---EGAATAR---ELGDAARYQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHH---TTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHH---HhCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 888888742 1222222 23667888999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|++|+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++|+
T Consensus 77 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 156 (254)
T 1hdc_A 77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKW 156 (254)
T ss_dssp HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHH
Confidence 99999999999998888899999999999999999999999888766542 3589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++++|++..+.+ |....+|..|.+
T Consensus 157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v 184 (254)
T 1hdc_A 157 GVRGLSKLAAVELGTDRIRVNSVHPGMT 184 (254)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecccC
Confidence 999999988765 666777777765
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-20 Score=214.61 Aligned_cols=169 Identities=20% Similarity=0.218 Sum_probs=145.6
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
...+|++|||||+||||+++|+.|+++|++ |++++|+.... .+ .+..++||++|+++++++++++
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~------------~~-~~~~~~~Dv~~~~~v~~~~~~~~ 76 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAK-VVSVSLDEKSD------------VN-VSDHFKIDVTNEEEVKEAVEKTT 76 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCC--C------------TT-SSEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCchhc------------cC-ceeEEEecCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999997 88888875321 11 3567889999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+++|+||+||||||+....++.+.+.++|++++++|+.|++++.+++.+++. ..+.||++||+++..+.++++.|+++
T Consensus 77 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 156 (269)
T 3vtz_A 77 KKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTS 156 (269)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHH
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHH
Confidence 6799999999999999999999999999999999999999999998876542 45899999999999999999999999
Q ss_pred HHHHHHHHHHHHHcC---CCeEEEEcccc
Q psy1119 935 NSIMERICEARRAEG---LPGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~G---lp~~ai~~g~~ 960 (1392)
|+++++|++..+.+. ..+.+|..|.+
T Consensus 157 Kaa~~~l~~~la~e~~~~i~vn~v~PG~v 185 (269)
T 3vtz_A 157 KHALLGLTRSVAIDYAPKIRCNAVCPGTI 185 (269)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEEECCC
Confidence 999999999988774 33445555544
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-20 Score=212.03 Aligned_cols=176 Identities=18% Similarity=0.186 Sum_probs=139.1
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+. +......++++..+.++.++.||++|+++++++++++ +
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGAA-VVVADINA---EAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLA 82 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEcCCH---HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999997 88888874 3344455666777889999999999999999999998 6
Q ss_pred hcCCccEEEECccc---CCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHH
Q psy1119 858 KLGPVDGIFNLAVV---LKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv---~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
.+++||+||||||+ ....++.+++.++|++.+++|+.|++++.+++.+.+. ..+.||++||.++. ++++.|+
T Consensus 83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~ 159 (253)
T 3qiv_A 83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYG 159 (253)
T ss_dssp HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------
T ss_pred HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhH
Confidence 78999999999998 4556788999999999999999999999988766542 45799999999876 5678899
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++|+++++|++..+.+ |+...+|..|.+.
T Consensus 160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 192 (253)
T 3qiv_A 160 LAKVGINGLTQQLSRELGGRNIRINAIAPGPID 192 (253)
T ss_dssp CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCc
Confidence 9999999999988877 5566777776653
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.5e-20 Score=212.27 Aligned_cols=180 Identities=19% Similarity=0.242 Sum_probs=156.0
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
...++++|||||+||||+++|++|+++|++ |++++|+.. ......++++..|.++.++.||++|.++++++++++
T Consensus 41 ~l~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 116 (285)
T 2c07_A 41 CGENKVALVTGAGRGIGREIAKMLAKSVSH-VICISRTQK---SCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKIL 116 (285)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTSSE-EEEEESSHH---HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHcCCE-EEEEcCCHH---HHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHH
Confidence 346799999999999999999999999997 677887742 233445566667888999999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+.++++|+||||||+....++.+.+.++|++.+++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++
T Consensus 117 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~as 196 (285)
T 2c07_A 117 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSS 196 (285)
T ss_dssp HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHH
Confidence 6789999999999999888999999999999999999999999988765442 34799999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++++|++..+.+ |++..++.+|.+.
T Consensus 197 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 227 (285)
T 2c07_A 197 KAGVIGFTKSLAKELASRNITVNAIAPGFIS 227 (285)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHHHhCcEEEEEEeCcEe
Confidence 99999999887655 7788888888764
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-20 Score=215.07 Aligned_cols=178 Identities=21% Similarity=0.251 Sum_probs=144.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHH---hcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIW---KSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l---~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+... .+...+++ ...+.++.++.||++|+++++++++++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGAK-VTITGRHAER---LEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT 80 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHH
Confidence 5789999999999999999999999997 8888987422 22333444 445678899999999999999999998
Q ss_pred -hhcCCccEEEECcccCCCccccCC----CHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEeccccc-ccCCCCCh
Q psy1119 857 -NKLGPVDGIFNLAVVLKDALFENQ----TPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSC-GRGNAGQT 929 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d~~~~~~----t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~-~~G~~gq~ 929 (1392)
+++|+||+||||||+....++.++ +.++|++++++|+.|++++.+++.+.+. ..+.||++||+++ ..+.++++
T Consensus 81 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 160 (278)
T 1spx_A 81 LGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFP 160 (278)
T ss_dssp HHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSH
T ss_pred HHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCCCCcc
Confidence 679999999999999888888888 9999999999999999999998866542 1389999999999 88999999
Q ss_pred hHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 930 NYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
.|+++|+++++|++..+.+ |++..+|..|.+.
T Consensus 161 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 196 (278)
T 1spx_A 161 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVA 196 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence 9999999999999987654 8888999988774
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=211.66 Aligned_cols=176 Identities=21% Similarity=0.192 Sum_probs=148.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||++|||+++|++|+++|++ |++++|+... .++..++ .+.++.++.||++|.++++++++++ +
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~---~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGAK-VVIVDRDKAG---AERVAGE---IGDAALAVAADISKEADVDAAVEAALS 79 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHH---HCTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCHHH---HHHHHHH---hCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 36799999999999999999999999997 8888998422 2222233 3667899999999999999999998 6
Q ss_pred hcCCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC------CCeEEEecccccccCCCCChh
Q psy1119 858 KLGPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT------LGQFVVFSSVSCGRGNAGQTN 930 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~------l~~fV~~SS~s~~~G~~gq~~ 930 (1392)
++++||+||||||+.. ...+.+.+.++|++++++|+.|++++.+++.+.+.+ .++||++||.++..+.++++.
T Consensus 80 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~ 159 (261)
T 3n74_A 80 KFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAW 159 (261)
T ss_dssp HHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHH
T ss_pred hcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccH
Confidence 7899999999999876 678899999999999999999999999888665422 457999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 931 YGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++|+++++|++..+.+ |+...+|..|.+.
T Consensus 160 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 194 (261)
T 3n74_A 160 YNATKGWVVSVTKALAIELAPAKIRVVALNPVAGE 194 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccc
Confidence 999999999999988776 6667777776653
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-20 Score=215.85 Aligned_cols=177 Identities=16% Similarity=0.123 Sum_probs=151.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEec-CCCcccHHHHHHHHHHh-cCCceEEEEeccCCCHH----------
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTS-RSGVKNGYQALRIKIWK-SYDVQVLISTDDITTEA---------- 847 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~s-Rs~~~~~~~~~~~~~l~-~~G~~v~~~~~Dv~~~~---------- 847 (1392)
.++++|||||+||||+++|+.|+++|++ |++++ |+.. ..+...++++ ..|.++.+++||+++.+
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGYA-VCLHYHRSAA---EANALSATLNARRPNSAITVQADLSNVATAPVSGADGS 83 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHH---HHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEcCCCHH---HHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence 5789999999999999999999999997 77888 8742 2333444554 55778999999999999
Q ss_pred -------HHHHHHHHH-hhcCCccEEEECcccCCCccccCCC--------------HHHHHHHHhhHhHHHHHHHHHHhh
Q psy1119 848 -------GVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQT--------------PEDFNASLGPKANATKYFDKYSRT 905 (1392)
Q Consensus 848 -------~v~~l~~~~-~~~g~I~gvi~~Agv~~d~~~~~~t--------------~e~~~~~~~~kv~g~~~L~~~~~~ 905 (1392)
+++++++++ +++|+||+||||||+....++.+++ .++|++++++|+.|++++.+++.+
T Consensus 84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 163 (291)
T 1e7w_A 84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH 163 (291)
T ss_dssp CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 999999998 6799999999999998888899999 999999999999999999998866
Q ss_pred hCC--C------CCeEEEecccccccCCCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 906 MCP--T------LGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 906 ~~~--~------l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
.+. . .+.||++||+++..+.++++.|+++|+++++|++..+.+ |..+.+|..|.+
T Consensus 164 ~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v 230 (291)
T 1e7w_A 164 RVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS 230 (291)
T ss_dssp HHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred HHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCc
Confidence 542 2 479999999999999999999999999999999988766 666777777766
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.84 E-value=9.3e-20 Score=205.16 Aligned_cols=177 Identities=18% Similarity=0.232 Sum_probs=152.4
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHH-hcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIW-KSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l-~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++++|||||+||||+++|++|+++|++ |++++|+.. ..+...+++ +..|.++.++.||++|+++++++++++ ++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDR-VAALDLSAE---TLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQ 77 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999996 888888742 223334444 455778999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCcc---ccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHH
Q psy1119 859 LGPVDGIFNLAVVLKDAL---FENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGM 933 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~---~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaa 933 (1392)
++++|+||||||+....+ +.+++.++|++.+++|+.|++++.+++.+.+. ..++||++||.++..+.++++.|++
T Consensus 78 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~ 157 (250)
T 2cfc_A 78 FGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTT 157 (250)
T ss_dssp HSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred hCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHH
Confidence 899999999999887666 89999999999999999999999888765442 3579999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+|++++.|++..+.+ |++..++..|.+.
T Consensus 158 sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~ 189 (250)
T 2cfc_A 158 SKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIE 189 (250)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCc
Confidence 999999999987765 7888888888764
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.9e-20 Score=210.87 Aligned_cols=175 Identities=16% Similarity=0.132 Sum_probs=150.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+.. ..+...+++. .++.++.||++|+++++++++++ ++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~ 78 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAK-VVFGDILDE---EGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTA 78 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHhh---cCceEEEecCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 888888742 2222333332 24778899999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|++|+||||||+....++.+++.++|++.+++|+.|++++.+++.+.+. ..+.||++||.++..+.++++.|+++|+
T Consensus 79 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 158 (260)
T 1nff_A 79 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKF 158 (260)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHH
Confidence 99999999999998888999999999999999999999999888765542 3589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |++..+|..|.+.
T Consensus 159 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 187 (260)
T 1nff_A 159 AVRGLTKSTALELGPSGIRVNSIHPGLVK 187 (260)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHhCccCcEEEEEEeCCCC
Confidence 999999987765 7778888887664
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.6e-20 Score=209.13 Aligned_cols=175 Identities=21% Similarity=0.196 Sum_probs=146.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHH---hCCceEEEecCCCcccHHHHHHHHHHhcC--CceEEEEeccCCCHHHHHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVL---RGARKLVLTSRSGVKNGYQALRIKIWKSY--DVQVLISTDDITTEAGVVNLLT 854 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~---~GAr~lvl~sRs~~~~~~~~~~~~~l~~~--G~~v~~~~~Dv~~~~~v~~l~~ 854 (1392)
.++++|||||+||||+++|+.|++ +|++ |++++|+... .+...++++.. |.++.++.||++|+++++++++
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~-V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 80 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSV-MLVSARSESM---LRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLS 80 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCE-EEEEESCHHH---HHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCCe-EEEEeCCHHH---HHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHH
Confidence 468999999999999999999999 8996 8888997422 23334444432 6789999999999999999999
Q ss_pred HH-h--hcCCcc--EEEECcccCCC--ccccC-CCHHHHHHHHhhHhHHHHHHHHHHhhhCCC----CCeEEEecccccc
Q psy1119 855 EA-N--KLGPVD--GIFNLAVVLKD--ALFEN-QTPEDFNASLGPKANATKYFDKYSRTMCPT----LGQFVVFSSVSCG 922 (1392)
Q Consensus 855 ~~-~--~~g~I~--gvi~~Agv~~d--~~~~~-~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~----l~~fV~~SS~s~~ 922 (1392)
.+ + .+|++| +||||||+... .++.+ .+.++|++++++|+.|++++.+++.+.+.+ .+.||++||+++.
T Consensus 81 ~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~ 160 (259)
T 1oaa_A 81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL 160 (259)
T ss_dssp HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred HHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhc
Confidence 98 4 568999 99999998654 56777 799999999999999999999998777643 3789999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHcCCCeEEEEccc
Q psy1119 923 RGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGA 959 (1392)
Q Consensus 923 ~G~~gq~~Yaaana~ld~la~~r~~~Glp~~ai~~g~ 959 (1392)
.+.++++.|+++|+++++|++..+.+.-+ +.++.-.
T Consensus 161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~-i~vn~v~ 196 (259)
T 1oaa_A 161 QPYKGWGLYCAGKAARDMLYQVLAAEEPS-VRVLSYA 196 (259)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHCTT-EEEEEEE
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHhhCCC-ceEEEec
Confidence 99999999999999999999999887544 4444333
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-20 Score=215.06 Aligned_cols=178 Identities=16% Similarity=0.121 Sum_probs=149.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCc---------ccHHHHHHHHHHhcCCceEEEEeccCCCHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGV---------KNGYQALRIKIWKSYDVQVLISTDDITTEAGV 849 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~---------~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v 849 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+.. ..+......+.++..|.++.+++||++|++++
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGAD-IIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL 89 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 46899999999999999999999999998 888887621 12334444555666688999999999999999
Q ss_pred HHHHHHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccCC
Q psy1119 850 VNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRGN 925 (1392)
Q Consensus 850 ~~l~~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G~ 925 (1392)
+++++++ +++|+||+||||||+..... +.++|++++++|+.|++++.+++.+++. ..+.||++||+++..|.
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 165 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGV 165 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCC
Confidence 9999998 67999999999999875433 6899999999999999999998866542 25799999999999887
Q ss_pred ----CCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 926 ----AGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 926 ----~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++.|+++|+++++|++..+.+ |+.+.+|..|.+.
T Consensus 166 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~ 209 (278)
T 3sx2_A 166 GSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVE 209 (278)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBS
T ss_pred ccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCcc
Confidence 88999999999999999988765 5667778777663
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.4e-20 Score=209.83 Aligned_cols=179 Identities=16% Similarity=0.217 Sum_probs=150.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
..+++|||||+||||+++|++|+++|++ |++++|+.. ...+...+.++..+.++.++.||++|+++++++++++ ++
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~-v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYS-VTVTYHSDT--TAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCH--HHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCE-EEEEcCCCh--HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999997 666666632 2233344455666788999999999999999999998 67
Q ss_pred cCCccEEEECcc--cCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEeccc-cc-ccCCCCChhHH
Q psy1119 859 LGPVDGIFNLAV--VLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSV-SC-GRGNAGQTNYG 932 (1392)
Q Consensus 859 ~g~I~gvi~~Ag--v~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~-s~-~~G~~gq~~Ya 932 (1392)
+++||+|||||| .....++.+++.++|++.+++|+.|++++.+++.+.+. ..+.||++||. ++ ..+.++++.|+
T Consensus 83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~ 162 (264)
T 3i4f_A 83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFA 162 (264)
T ss_dssp HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHH
T ss_pred hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhH
Confidence 899999999999 66778899999999999999999999999998865442 45899999998 44 56788999999
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++|+++++|++..+.+ |....+|..|.+.
T Consensus 163 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 195 (264)
T 3i4f_A 163 AAKVGLVSLTKTVAYEEAEYGITANMVCPGDII 195 (264)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEccCCcc
Confidence 9999999999987765 6777888887664
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.3e-20 Score=209.00 Aligned_cols=171 Identities=18% Similarity=0.154 Sum_probs=147.5
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+... .+..++++ + .++.||++|+++++++++++ ++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~----~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~ 74 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGAL-VALCDLRPEG----KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYA 74 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSTTH----HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChhH----HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999996 8888888543 22233332 3 67899999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++|+
T Consensus 75 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 154 (256)
T 2d1y_A 75 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKG 154 (256)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHH
Confidence 89999999999998888999999999999999999999999998866542 3589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++++|++..+.+ |....+|..|.+
T Consensus 155 a~~~~~~~la~e~~~~gi~v~~v~Pg~v 182 (256)
T 2d1y_A 155 GLVNLTRSLALDLAPLRIRVNAVAPGAI 182 (256)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEeeCCc
Confidence 999999988765 666677777655
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.9e-20 Score=210.93 Aligned_cols=176 Identities=22% Similarity=0.170 Sum_probs=150.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC--CceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY--DVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~--G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+... .+...++++.. +.++.++.||++|+++++++++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGAR-LLLFSRNREK---LEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKAR 81 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 5789999999999999999999999997 8888987422 22333344322 447888999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+++| ||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++
T Consensus 82 ~~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 160 (260)
T 2z1n_A 82 DLGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIM 160 (260)
T ss_dssp HTTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred HhcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHH
Confidence 6688 99999999998888999999999999999999999999988866542 34899999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
|+++++|++..+.+ |+...+|..|.+
T Consensus 161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 190 (260)
T 2z1n_A 161 RLPVIGVVRTLALELAPHGVTVNAVLPSLI 190 (260)
T ss_dssp THHHHHHHHHHHHHHGGGTEEEEEEEECHH
T ss_pred HHHHHHHHHHHHHHHhhhCeEEEEEEECCc
Confidence 99999999987766 677777777765
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-20 Score=211.61 Aligned_cols=172 Identities=13% Similarity=0.158 Sum_probs=143.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+.... . +.++..+ +.++.||++|+++++++++++ +
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~---~---~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~ 95 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHGHR-VIISYRTEHAS---V---TELRQAG--AVALYGDFSCETGIMAFIDLLKT 95 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTTCC-EEEEESSCCHH---H---HHHHHHT--CEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCChHHH---H---HHHHhcC--CeEEECCCCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999997 88889985321 1 2222334 567899999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||+||||||+..... .+.+.++|++++++|+.|++++.+++.+++. ..+.||++||+++..+.++++.|+++|
T Consensus 96 ~~g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 174 (260)
T 3gem_A 96 QTSSLRAVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATK 174 (260)
T ss_dssp HCSCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHH
T ss_pred hcCCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHH
Confidence 7999999999999876665 6788999999999999999999998876553 348999999999999999999999999
Q ss_pred HHHHHHHHHHHHcC---CCeEEEEcccc
Q psy1119 936 SIMERICEARRAEG---LPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~G---lp~~ai~~g~~ 960 (1392)
+++++|++..+.+. ..+.+|..|.+
T Consensus 175 aa~~~l~~~la~e~~~~Irvn~v~PG~v 202 (260)
T 3gem_A 175 AGLESLTLSFAARFAPLVKVNGIAPALL 202 (260)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEeeccc
Confidence 99999999988774 44555666554
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.84 E-value=6.4e-20 Score=208.80 Aligned_cols=179 Identities=18% Similarity=0.184 Sum_probs=150.4
Q ss_pred CCCCeEEEEcCc--chHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHh-cCCceEEEEeccCCCHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGL--GGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK-SYDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 779 ~~~~~ylItGG~--gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~-~~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
..++++|||||+ +|||+++|++|+++|++ +++++|+.... ..+.+++++ ..|.++.++.||++|.+++++++++
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~-v~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAA-VAITYASRAQG--AEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKD 94 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHTSCE-EEECBSSSSSH--HHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCe-EEEEeCCcchh--HHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHH
Confidence 468999999999 99999999999999997 77777764332 122333333 3478899999999999999999999
Q ss_pred H-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCC--CCChh
Q psy1119 856 A-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGN--AGQTN 930 (1392)
Q Consensus 856 ~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~--~gq~~ 930 (1392)
+ +++|+||+||||||+.....+.+.+.++|++++++|+.|++++.+++.+.+. ..+.||++||.++..+. ++++.
T Consensus 95 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~ 174 (267)
T 3gdg_A 95 VVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTS 174 (267)
T ss_dssp HHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHH
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCc
Confidence 8 6799999999999999999999999999999999999999999998865542 45899999999999887 68999
Q ss_pred HHHHHHHHHHHHHHHHHcCCC---eEEEEcccc
Q psy1119 931 YGMANSIMERICEARRAEGLP---GLAVEWGAV 960 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~Glp---~~ai~~g~~ 960 (1392)
|+++|+++++|++..+.+.-+ ..+|..|.+
T Consensus 175 Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v 207 (267)
T 3gdg_A 175 YNVAKAGCIHMARSLANEWRDFARVNSISPGYI 207 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCE
T ss_pred chHHHHHHHHHHHHHHHHhccCcEEEEEECCcc
Confidence 999999999999998887543 445555544
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.2e-20 Score=208.50 Aligned_cols=179 Identities=19% Similarity=0.153 Sum_probs=154.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+.. ......++++..|.++.++.||++|.++++++++++ +
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~~-V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGAR-VIIADLDEA---MATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHE 86 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999996 888888742 233344556666788999999999999999999998 6
Q ss_pred hcCCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCC--hhHH
Q psy1119 858 KLGPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQ--TNYG 932 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq--~~Ya 932 (1392)
+++++|+||||||+.. ..++.+.+.++|++.+++|+.|++++.+++.+.+. ..+.||++||+++..+.+++ +.|+
T Consensus 87 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~ 166 (260)
T 3awd_A 87 QEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYN 166 (260)
T ss_dssp HHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHH
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccH
Confidence 7899999999999877 77899999999999999999999999988765432 45899999999999988888 9999
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++|++++.|++..+.+ |++..++..|.+.
T Consensus 167 ~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~ 199 (260)
T 3awd_A 167 ASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIE 199 (260)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeec
Confidence 9999999999987765 7888888888764
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-20 Score=210.50 Aligned_cols=174 Identities=16% Similarity=0.173 Sum_probs=146.4
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC--CceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY--DVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~--G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+... .++..++++.. +..+..+.+|++++++++++++
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 81 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGAN-VLINGRREEN---VNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE--- 81 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSHHH---HHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH---
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH---
Confidence 5789999999999999999999999997 8888988432 33334444433 5678899999999999988764
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++++||++|||||+....++.+++.++|++++++|+.|++++.+++.+.+ ...+.||++||.++..+.++++.|+++|
T Consensus 82 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 161 (267)
T 3t4x_A 82 KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATK 161 (267)
T ss_dssp HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHH
Confidence 57899999999999999999999999999999999999999999886654 3457999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCC----eEEEEcccc
Q psy1119 936 SIMERICEARRAEGLP----GLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~Glp----~~ai~~g~~ 960 (1392)
+++++|++..+.+..+ +.+|..|.+
T Consensus 162 aa~~~l~~~la~e~~~~gi~vn~v~PG~v 190 (267)
T 3t4x_A 162 TMQLSLSRSLAELTTGTNVTVNTIMPGST 190 (267)
T ss_dssp HHHHHHHHHHHHHTTTSEEEEEEEEECCB
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEEeCCee
Confidence 9999999998876433 344444443
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=211.73 Aligned_cols=177 Identities=15% Similarity=0.163 Sum_probs=150.3
Q ss_pred CCCeEEEEcCc--chHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-CCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 780 SNKSYIICGGL--GGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-YDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 780 ~~~~ylItGG~--gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
.++++|||||+ ||||+++|++|+++|++ |++++|+.. .. ...+++.. .| .+.++.||++|+++++++++++
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~-V~~~~r~~~-~~---~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~ 80 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAE-VALSYQAER-LR---PEAEKLAEALG-GALLFRADVTQDEELDALFAGV 80 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCE-EEEEESCGG-GH---HHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCCHH-HH---HHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHHH
Confidence 57899999999 99999999999999997 888888752 11 12233322 23 3678899999999999999998
Q ss_pred -hhcCCccEEEECcccCCC----ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhH
Q psy1119 857 -NKLGPVDGIFNLAVVLKD----ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d----~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
+++|+||+||||||+... .++.+++.++|++.+++|+.|++++.+++.+.+.+.+.||++||+++..+.++++.|
T Consensus 81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 160 (261)
T 2wyu_A 81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVM 160 (261)
T ss_dssp HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHH
T ss_pred HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCchHH
Confidence 679999999999998764 678899999999999999999999999987655434799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 932 GMANSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 932 aaana~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
+++|+++++|++..+.+ |+.+.+|..|.+..
T Consensus 161 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t 195 (261)
T 2wyu_A 161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVRT 195 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcC
Confidence 99999999999987765 78888998887643
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.6e-20 Score=210.97 Aligned_cols=173 Identities=17% Similarity=0.184 Sum_probs=142.5
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
..++++|||||++|||+++|+.|+++|++ |++++|+. + ... +..+.++.++.||++|+++++++++.+.+
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~---~---~~~---~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQ-VVVLDIRG---E---DVV---ADLGDRARFAAADVTDEAAVASALDLAET 76 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHHTCE-EEEEESSC---H---HHH---HHTCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCch---H---HHH---HhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 35799999999999999999999999997 78888853 1 112 22367789999999999999999998866
Q ss_pred cCCccEEEECcccCCCccc----cCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC----------CCeEEEecccccccC
Q psy1119 859 LGPVDGIFNLAVVLKDALF----ENQTPEDFNASLGPKANATKYFDKYSRTMCPT----------LGQFVVFSSVSCGRG 924 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~----~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~----------l~~fV~~SS~s~~~G 924 (1392)
+|+||++|||||+.....+ .+.+.++|++++++|+.|++++.+++.+.+.+ .+.||++||+++..+
T Consensus 77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 156 (257)
T 3tl3_A 77 MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG 156 (257)
T ss_dssp HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC
T ss_pred hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC
Confidence 9999999999998765443 35899999999999999999999988765433 468999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 925 NAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 925 ~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
.++++.|+++|+++++|++..+.+ |....+|..|.+.
T Consensus 157 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~ 197 (257)
T 3tl3_A 157 QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFD 197 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCcc
Confidence 999999999999999999988766 5666777777663
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6.5e-20 Score=207.89 Aligned_cols=179 Identities=20% Similarity=0.203 Sum_probs=154.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+. .+......++++..+.++.++.||++|+++++++++++ ++
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~-V~~~~r~~--~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKAK-VVVNYRSK--EDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE 82 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSC--HHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEcCCC--hHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 88888832 12233445556666888999999999999999999988 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--C-CCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--T-LGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~-l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++++|+||||||+....++.+.+.++|++.+++|+.|++++.+++.+.+. . .+.||++||+++..+.++.+.|+++|
T Consensus 83 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 162 (261)
T 1gee_A 83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASK 162 (261)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHH
Confidence 89999999999998888899999999999999999999999988766542 2 57999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++.|++..+.+ |++..++..|.+.
T Consensus 163 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 192 (261)
T 1gee_A 163 GGMKLMTETLALEYAPKGIRVNNIGPGAIN 192 (261)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeCCcC
Confidence 9999999877654 7888888888764
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=211.73 Aligned_cols=178 Identities=15% Similarity=0.177 Sum_probs=150.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCC-------ceEEEEeccCCCHHHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYD-------VQVLISTDDITTEAGVVNL 852 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G-------~~v~~~~~Dv~~~~~v~~l 852 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.. ......++++..| .++.++.+|++|.++++++
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 81 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGAT-VAACDLDRA---AAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCL 81 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSHH---HHHHHHHTC------------CCEEEECCTTSHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCChH---HHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHH
Confidence 4689999999999999999999999997 888888742 2233334444444 5678899999999999999
Q ss_pred HHHH-hhcCCc-cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--C-CCeEEEecccccccCCCC
Q psy1119 853 LTEA-NKLGPV-DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--T-LGQFVVFSSVSCGRGNAG 927 (1392)
Q Consensus 853 ~~~~-~~~g~I-~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~-l~~fV~~SS~s~~~G~~g 927 (1392)
++.+ +.+|++ |+||||||+....++.+.+.++|++.+++|+.|++++.+++.+.+. . .++||++||+++..+.++
T Consensus 82 ~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 161 (264)
T 2pd6_A 82 LEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVG 161 (264)
T ss_dssp HHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTT
T ss_pred HHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCC
Confidence 9998 678999 9999999999888999999999999999999999999998876542 2 479999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 928 QTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 928 q~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++.|+++|++++.|++..+.+ |++..++.+|.+.
T Consensus 162 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 199 (264)
T 2pd6_A 162 QTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIA 199 (264)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred ChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeeccc
Confidence 999999999999999887665 7888888888664
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=3.1e-20 Score=212.16 Aligned_cols=212 Identities=13% Similarity=0.033 Sum_probs=167.6
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+.. ..+...++++..|.++.++.||++|.++++++++++ +
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 104 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSK-LVLWDINKH---GLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA 104 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEEcCHH---HHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999997 888888742 233444556666888999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
.++++|+||||||+....++.+.+.++|++.+++|+.|++++.+++.+.+ ...+.||++||.++..+.++++.|+++|
T Consensus 105 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 184 (272)
T 1yb1_A 105 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK 184 (272)
T ss_dssp HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred HCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHH
Confidence 78999999999999888889999999999999999999999988876554 2457999999999999989999999999
Q ss_pred HHHHHHHHHHHHc-------CCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccCCC
Q psy1119 936 SIMERICEARRAE-------GLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEP 1002 (1392)
Q Consensus 936 a~ld~la~~r~~~-------Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~~ 1002 (1392)
+++++|++..+.+ |+...+|.+|.+. +++... . . ... .....++++.+.+-.++..+.+
T Consensus 185 ~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~-t~~~~~----~-~-~~~-~~~~~~~dva~~i~~~~~~~~~ 250 (272)
T 1yb1_A 185 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVN-TGFIKN----P-S-TSL-GPTLEPEEVVNRLMHGILTEQK 250 (272)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHH-HCSTTC----T-H-HHH-CCCCCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCccc-CCcccc----c-c-ccc-cCCCCHHHHHHHHHHHHHcCCC
Confidence 9999999987765 6677778777553 223211 0 0 001 1234566666666666655544
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=5.7e-20 Score=206.68 Aligned_cols=178 Identities=21% Similarity=0.243 Sum_probs=147.4
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCC-ceEEEEeccC--CCHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYD-VQVLISTDDI--TTEAGVVNLLTE 855 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G-~~v~~~~~Dv--~~~~~v~~l~~~ 855 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+... .+...++++..+ .++.++.+|+ ++.+++++++++
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~ 87 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGAS-VVLLGRTEAS---LAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR 87 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEecCHHH---HHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH
Confidence 46899999999999999999999999997 8888998533 333444454444 4555666666 999999999999
Q ss_pred H-hhcCCccEEEECcccC-CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhH
Q psy1119 856 A-NKLGPVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 856 ~-~~~g~I~gvi~~Agv~-~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
+ +.+|+||+||||||+. ...++.+++.++|++++++|+.|++++.+++.+++. ..++||++||.++..+.++++.|
T Consensus 88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y 167 (247)
T 3i1j_A 88 VEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAY 167 (247)
T ss_dssp HHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHH
T ss_pred HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchh
Confidence 8 6789999999999985 567899999999999999999999999998866553 34799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc-----CCCeEEEEcccc
Q psy1119 932 GMANSIMERICEARRAE-----GLPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~r~~~-----Glp~~ai~~g~~ 960 (1392)
+++|+++++|++..+.+ |....+|..|.+
T Consensus 168 ~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v 201 (247)
T 3i1j_A 168 GVSKFATEGLMQTLADELEGVTAVRANSINPGAT 201 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Confidence 99999999999988776 233445555554
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=5.2e-20 Score=210.13 Aligned_cols=180 Identities=20% Similarity=0.210 Sum_probs=155.2
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+. ....+...++++..|.++.++.||++|+++++++++++ +
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~~-v~~~~r~~--~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGAS-VVVNYGSS--SKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS 95 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSC--HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCc--hHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 36789999999999999999999999997 77777732 12233445566667888999999999999999999988 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccc-cCCCCChhHHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCG-RGNAGQTNYGMANS 936 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~-~G~~gq~~Yaaana 936 (1392)
+++++|+||||||+.....+.+.+.++|++.+++|+.|++++.+++.+.+.+.++||++||.++. .+.++++.|+++|+
T Consensus 96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~ 175 (274)
T 1ja9_A 96 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKA 175 (274)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCCCCchHHHHHH
Confidence 78999999999999888889999999999999999999999999887655333799999999998 78899999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++.|++..+.+ |+...++.+|.+.
T Consensus 176 a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~ 204 (274)
T 1ja9_A 176 AVEGFCRAFAVDCGAKGVTVNCIAPGGVK 204 (274)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCccc
Confidence 999999987665 7888888888764
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.8e-20 Score=213.46 Aligned_cols=175 Identities=22% Similarity=0.244 Sum_probs=152.4
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+..... ... +..+.++.++.||++|.++++++++++ ++
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~---~~~---~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 76 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDT-VIGTARRTEALD---DLV---AAYPDRAEAISLDVTDGERIDVVAADVLAR 76 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSGGGGH---HHH---HHCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHH---HHH---HhccCCceEEEeeCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999999997 888888854322 122 234667889999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|++|+||||||+....++.+.+.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++|+
T Consensus 77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 156 (281)
T 3m1a_A 77 YGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKA 156 (281)
T ss_dssp HSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHH
Confidence 99999999999998888999999999999999999999999888765542 4589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |++..++..|.+.
T Consensus 157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 185 (281)
T 3m1a_A 157 ALEQLSEGLADEVAPFGIKVLIVEPGAFR 185 (281)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHhhccCcEEEEEecCccc
Confidence 999999987765 7888889888764
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5.6e-20 Score=209.15 Aligned_cols=179 Identities=16% Similarity=0.218 Sum_probs=141.1
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+.. ..+...++++..|.++.++.||+++.++++++++++ +
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAV-IHTCARNEY---ELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS 87 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999996 888888742 233445556666788999999999999999999998 5
Q ss_pred hc-CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KL-GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~-g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
.+ +++|+||||||+....++.+.+.++|++.+++|+.|++++.+++.+.+. ..++||++||.++..+.++.+.|+++
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s 167 (266)
T 1xq1_A 88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSAT 167 (266)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHH
T ss_pred HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHH
Confidence 67 8999999999998888899999999999999999999999988855432 45899999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|++++.|++..+.+ |++..++..|.+.
T Consensus 168 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 198 (266)
T 1xq1_A 168 KGALNQLARNLACEWASDGIRANAVAPAVIA 198 (266)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEECCSCC
T ss_pred HHHHHHHHHHHHHHHhHhCcEEEEEeeCCCc
Confidence 99999999987765 8888899888764
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.9e-20 Score=207.11 Aligned_cols=168 Identities=17% Similarity=0.212 Sum_probs=147.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+... +..| +..+.||++|+++++++++++ ++
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~~-V~~~~r~~~~-----------~~~~--~~~~~~D~~d~~~~~~~~~~~~~~ 71 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGAK-VTGFDQAFTQ-----------EQYP--FATEVMDVADAAQVAQVCQRLLAE 71 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCCCS-----------SCCS--SEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCchhh-----------hcCC--ceEEEcCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 8888887531 2234 667889999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|++|+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++.+.|+++|+
T Consensus 72 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 151 (250)
T 2fwm_X 72 TERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKA 151 (250)
T ss_dssp CSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHH
Confidence 99999999999998888999999999999999999999999998865442 4589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |+...+|..|.+.
T Consensus 152 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 180 (250)
T 2fwm_X 152 ALKSLALSVGLELAGSGVRCNVVSPGSTD 180 (250)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCC-
T ss_pred HHHHHHHHHHHHhCccCCEEEEEECCccc
Confidence 999999988765 7888888888763
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.6e-20 Score=211.99 Aligned_cols=176 Identities=14% Similarity=0.142 Sum_probs=150.6
Q ss_pred CCCeEEEEcCc--chHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-CCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 780 SNKSYIICGGL--GGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-YDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 780 ~~~~ylItGG~--gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
.++++|||||+ ||||+++|+.|+++|++ |++++|+.. .. ...+++.. .| .+.++.||++|+++++++++++
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~-V~~~~r~~~-~~---~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~ 78 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGAT-LAFTYLNES-LE---KRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSV 78 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCE-EEEEESSTT-TH---HHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEeCCHH-HH---HHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHH
Confidence 57899999999 99999999999999997 888888853 21 12233322 23 3678899999999999999998
Q ss_pred -hhcCCccEEEECcccCCC----ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhH
Q psy1119 857 -NKLGPVDGIFNLAVVLKD----ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d----~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
+++|+||+||||||+... .++.+++.++|++++++|+.|++++.+++.+.+.+.+.||++||+++..+.++++.|
T Consensus 79 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 158 (275)
T 2pd4_A 79 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVM 158 (275)
T ss_dssp HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHH
T ss_pred HHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhh
Confidence 679999999999998764 678899999999999999999999999987765445799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 932 GMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 932 aaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 192 (275)
T 2pd4_A 159 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIR 192 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccc
Confidence 99999999999987766 7888888888764
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-19 Score=205.81 Aligned_cols=175 Identities=19% Similarity=0.131 Sum_probs=149.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+.. ..+...++++ .++.++.||++|+++++++++++ ++
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~~~~~ 83 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGAT-VAIADLDVM---AAQAVVAGLE---NGGFAVEVDVTKRASVDAAMQKAIDA 83 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHTCT---TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHh---cCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999996 888888742 1222222222 25678899999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--C-CCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--T-LGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~-l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+|++|+||||||+....++.+++.++|++.+++|+.|++++.+++.+.+. . .+.||++||.++..+.++.+.|+++|
T Consensus 84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 163 (263)
T 3ak4_A 84 LGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASK 163 (263)
T ss_dssp HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHH
Confidence 99999999999998888899999999999999999999999998866542 2 58999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |++..+|..|.+.
T Consensus 164 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 193 (263)
T 3ak4_A 164 FAVFGWTQALAREMAPKNIRVNCVCPGFVK 193 (263)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBT
T ss_pred HHHHHHHHHHHHHHhHcCeEEEEEeccccc
Confidence 9999999987765 7888888887763
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=4e-20 Score=216.93 Aligned_cols=179 Identities=16% Similarity=0.114 Sum_probs=151.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEec-CCCcccHHHHHHHHHHh-cCCceEEEEeccCCCHH---------
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTS-RSGVKNGYQALRIKIWK-SYDVQVLISTDDITTEA--------- 847 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~s-Rs~~~~~~~~~~~~~l~-~~G~~v~~~~~Dv~~~~--------- 847 (1392)
..++++|||||+||||+++|+.|+++|++ |++++ |+.. ..+...++++ ..|.++.++.||+++.+
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~-Vv~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 119 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYA-VCLHYHRSAA---EANALSATLNARRPNSAITVQADLSNVATAPVSGADG 119 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHH---HHHHHHHHHHHHSTTCEEEEECCCSSSCBCC------
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEcCCCHH---HHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccc
Confidence 46799999999999999999999999997 77777 8742 2333344454 45778999999999999
Q ss_pred --------HHHHHHHHH-hhcCCccEEEECcccCCCccccCCC--------------HHHHHHHHhhHhHHHHHHHHHHh
Q psy1119 848 --------GVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQT--------------PEDFNASLGPKANATKYFDKYSR 904 (1392)
Q Consensus 848 --------~v~~l~~~~-~~~g~I~gvi~~Agv~~d~~~~~~t--------------~e~~~~~~~~kv~g~~~L~~~~~ 904 (1392)
+++++++++ +++|+||+||||||+....++.+++ .++|++++++|+.|++++.+++.
T Consensus 120 ~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 199 (328)
T 2qhx_A 120 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA 199 (328)
T ss_dssp -CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 6799999999999998888899999 99999999999999999999886
Q ss_pred hhCC--C------CCeEEEecccccccCCCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 905 TMCP--T------LGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 905 ~~~~--~------l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+.+. . .+.||++||+++..+.++++.|+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 200 ~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~ 268 (328)
T 2qhx_A 200 HRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSV 268 (328)
T ss_dssp HHHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred HHHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence 6542 2 579999999999999999999999999999999988776 6777788887764
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-20 Score=212.07 Aligned_cols=176 Identities=17% Similarity=0.189 Sum_probs=148.4
Q ss_pred CCCeEEEEcCc--chHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-CCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 780 SNKSYIICGGL--GGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-YDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 780 ~~~~ylItGG~--gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
.++++|||||+ ||||+++|++|+++|++ |++++|+. .... ..+++.. .|. +.++.||++|+++++++++++
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~-V~~~~r~~-~~~~---~~~~l~~~~~~-~~~~~~D~~~~~~v~~~~~~~ 81 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQND-KLKG---RVEEFAAQLGS-DIVLQCDVAEDASIDTMFAEL 81 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCE-EEEEESST-TTHH---HHHHHHHHTTC-CCEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEEcCcH-HHHH---HHHHHHHhcCC-cEEEEccCCCHHHHHHHHHHH
Confidence 57899999999 99999999999999997 88888875 2222 2233322 232 377899999999999999998
Q ss_pred -hhcCCccEEEECcccCCC----ccccC-CCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChh
Q psy1119 857 -NKLGPVDGIFNLAVVLKD----ALFEN-QTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTN 930 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d----~~~~~-~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~ 930 (1392)
+++|+||+||||||+... .++.+ .+.++|++++++|+.|++++.+++.+.+.+.+.||++||+++..+.++++.
T Consensus 82 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 161 (265)
T 1qsg_A 82 GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNV 161 (265)
T ss_dssp HTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTH
T ss_pred HHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCchH
Confidence 678999999999998763 67778 999999999999999999999998776544579999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 931 YGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 162 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 196 (265)
T 1qsg_A 162 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIR 196 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCc
Confidence 999999999999988766 6777788877663
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.2e-20 Score=210.56 Aligned_cols=178 Identities=16% Similarity=0.143 Sum_probs=151.0
Q ss_pred CCCCeEEEEcCc--chHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-CCceEEEEeccCCCHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGL--GGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-YDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 779 ~~~~~ylItGG~--gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
..++++|||||+ ||||+++|+.|+++|++ |++++|+.. . ....+++.. .| .+.++.||++|.+++++++++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~-V~~~~r~~~-~---~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~ 92 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQ-LAFTYATPK-L---EKRVREIAKGFG-SDLVVKCDVSLDEDIKNLKKF 92 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCE-EEEEESSGG-G---HHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCE-EEEEeCCHH-H---HHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHH
Confidence 357899999999 99999999999999997 888888752 1 122233322 23 367789999999999999999
Q ss_pred H-hhcCCccEEEECcccCCC----ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCCh
Q psy1119 856 A-NKLGPVDGIFNLAVVLKD----ALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQT 929 (1392)
Q Consensus 856 ~-~~~g~I~gvi~~Agv~~d----~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~ 929 (1392)
+ +++|+||+||||||+... .++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++
T Consensus 93 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 172 (285)
T 2p91_A 93 LEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYN 172 (285)
T ss_dssp HHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTT
T ss_pred HHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCcc
Confidence 8 679999999999998764 6788999999999999999999999999877654 458999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 930 NYGMANSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
.|+++|+++++|++..+.+ |+.+.+|..|.+..
T Consensus 173 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t 209 (285)
T 2p91_A 173 VMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKT 209 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccC
Confidence 9999999999999987765 78888998887643
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-19 Score=209.55 Aligned_cols=183 Identities=19% Similarity=0.130 Sum_probs=155.1
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC-CceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY-DVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~-G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+... .....++++.. |.++.++.||++|.++++++++.+
T Consensus 24 l~~k~vlITGasggiG~~la~~L~~~G~~-V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 99 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQ-CVIASRKMDV---LKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI 99 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999997 8888987422 22333444433 678899999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC---CCCCeEEEecccccccCCCCChhHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC---PTLGQFVVFSSVSCGRGNAGQTNYGM 933 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~---~~l~~fV~~SS~s~~~G~~gq~~Yaa 933 (1392)
+.+|+||+||||||+....++.+.+.++|++.+++|+.|++++.+++.+.+ ...+.||++||+++..+.+++..|++
T Consensus 100 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~ 179 (302)
T 1w6u_A 100 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS 179 (302)
T ss_dssp HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHH
Confidence 678999999999999888889999999999999999999999988876544 23479999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEccccCcccc
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAVGEVGL 965 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~~~~G~ 965 (1392)
+|++++.|++..+.+ |++..++..|.+...++
T Consensus 180 sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~ 215 (302)
T 1w6u_A 180 AKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGA 215 (302)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcch
Confidence 999999999987765 78888999888754433
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=7.2e-20 Score=208.86 Aligned_cols=174 Identities=20% Similarity=0.218 Sum_probs=148.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.. ..+...+++. .+.++.||++|+++++++++++ ++
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGAR-VVICDKDES---GGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRR 79 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 888888742 1222222222 2678899999999999999998 67
Q ss_pred cCCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|+||+||||||+.. ..++.+++.++|++++++|+.|++++.+++.+++. ..+.||++||+++..|.++++.|+++|+
T Consensus 80 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 159 (270)
T 1yde_A 80 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKG 159 (270)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCCcccHHHHH
Confidence 999999999999875 47899999999999999999999999998866542 3589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++|++..+.+ |....+|..|.+.
T Consensus 160 a~~~~~~~la~e~~~~gi~vn~v~Pg~v~ 188 (270)
T 1yde_A 160 AVTAMTKALALDESPYGVRVNCISPGNIW 188 (270)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred HHHHHHHHHHHHhhhhCcEEEEEEeCccc
Confidence 999999988754 7888888888763
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-19 Score=203.96 Aligned_cols=177 Identities=20% Similarity=0.239 Sum_probs=150.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.. ..+...++++.. .++.++.+|++|+++++++++.+ +.
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGAK-VMITGRHSD---VGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKA 79 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 888888742 222333444332 46888999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC--C-CeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT--L-GQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~--l-~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++++|+||||||+....++.+.+.++|++.+++|+.|++++.+++.+.+.+ . +.||++||.++..+.++++.|+++|
T Consensus 80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 159 (251)
T 1zk4_A 80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASK 159 (251)
T ss_dssp HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHH
Confidence 899999999999988888999999999999999999999999887665533 2 6899999999999999999999999
Q ss_pred HHHHHHHHHHHH------cCCCeEEEEccccC
Q psy1119 936 SIMERICEARRA------EGLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~------~Glp~~ai~~g~~~ 961 (1392)
++++.|++..+. .|++..++..|.+.
T Consensus 160 ~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~ 191 (251)
T 1zk4_A 160 GAVRIMSKSAALDCALKDYDVRVNTVHPGYIK 191 (251)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHhcccCCCeEEEEEeeCcCc
Confidence 999999987654 46777788877653
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=7.5e-20 Score=205.99 Aligned_cols=175 Identities=18% Similarity=0.216 Sum_probs=134.0
Q ss_pred ccCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 777 YADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 777 ~~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
...+++++|||||+||||+++|++|+++|++ |++++|+.. ..+...+++ +.++.+..||+++.+++++++++
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~---~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~- 81 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGSK-VIISGSNEE---KLKSLGNAL---KDNYTIEVCNLANKEECSNLISK- 81 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHT-
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEcCCHH---HHHHHHHHh---ccCccEEEcCCCCHHHHHHHHHh-
Confidence 3467899999999999999999999999997 888888742 222333333 34678889999999999888764
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+++||+||||||+.....+.+++.++|++.+++|+.|++++.+++.+.+ ...++||++||.++..+.++++.|+++
T Consensus 82 --~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 159 (249)
T 3f9i_A 82 --TSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCAS 159 (249)
T ss_dssp --CSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHH
T ss_pred --cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHH
Confidence 4789999999999998899999999999999999999999998876544 245799999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++++|++..+.+ |....++..|.+.
T Consensus 160 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 190 (249)
T 3f9i_A 160 KAGLIGMTKSLSYEVATRGITVNAVAPGFIK 190 (249)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEecCccc
Confidence 99999999987765 7777888887664
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.83 E-value=9.9e-20 Score=207.00 Aligned_cols=166 Identities=16% Similarity=0.127 Sum_probs=145.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+... +.++.++.||++|.++++++++++ ++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~--------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 71 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDEGSK-VIDLSIHDPG--------------EAKYDHIECDVTNPDQVKASIDHIFKE 71 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESSCCC--------------SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEecCccc--------------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 8888887532 445778899999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++.+.|+++|+
T Consensus 72 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 151 (264)
T 2dtx_A 72 YGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKH 151 (264)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHH
Confidence 99999999999998888999999999999999999999999998876553 3479999999999999999999999999
Q ss_pred HHHHHHHHHHHcC---CCeEEEEcccc
Q psy1119 937 IMERICEARRAEG---LPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~G---lp~~ai~~g~~ 960 (1392)
++++|++..+.+. +...+|..|.+
T Consensus 152 a~~~~~~~la~e~~~~i~vn~v~PG~v 178 (264)
T 2dtx_A 152 AVIGLTKSIALDYAPLLRCNAVCPATI 178 (264)
T ss_dssp HHHHHHHHHHHHHTTTSEEEEEEECSB
T ss_pred HHHHHHHHHHHHhcCCcEEEEEEeCCC
Confidence 9999999987764 44556665554
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=7.5e-20 Score=205.59 Aligned_cols=178 Identities=22% Similarity=0.251 Sum_probs=151.4
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-CCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-YDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+... .+...++++. .|.++.++.||++|+++++++++++ +
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~~-V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGST-VIITGTSGER---AKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN 81 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSHHH---HHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCChHH---HHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 8888887422 2222333333 3678899999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
.++++|+||||||+....++.+.+.++|++.+++|+.|++++.+++.+.+. ..++||++||.++..+.+++..|+++|
T Consensus 82 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 161 (248)
T 2pnf_A 82 LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTK 161 (248)
T ss_dssp HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHH
Confidence 789999999999998888899999999999999999999999888765442 457999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |++..++.+|.+.
T Consensus 162 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~ 191 (248)
T 2pnf_A 162 AGLIGFTKSLAKELAPRNVLVNAVAPGFIE 191 (248)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeceec
Confidence 9999999987654 6777788877663
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.8e-20 Score=206.47 Aligned_cols=177 Identities=23% Similarity=0.325 Sum_probs=129.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEe-cCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLT-SRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~-sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++++|||||+||||+++|++|+++|++ |+++ .|+... .....++++..|.++.++.||++|+++++++++++ +
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~~-V~~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGAN-IVLNGSPASTS---LDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMD 79 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEECTTCSH---HHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCcCHHH---HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999997 6666 665432 23334555666888999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
.++++|+||||||+....++.+.+.++|++.+++|+.|++++.+++.+.+. ..+.||++||.++..|.++++.|+++|
T Consensus 80 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 159 (247)
T 2hq1_A 80 AFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASK 159 (247)
T ss_dssp HHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHH
Confidence 789999999999998888889999999999999999999999988766442 457999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++++.|++..+.+ |++..++..|.+
T Consensus 160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 188 (247)
T 2hq1_A 160 AGLIGFTKSIAKEFAAKGIYCNAVAPGII 188 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEEEEEEE
Confidence 9999999987665 677777777665
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.3e-19 Score=202.47 Aligned_cols=177 Identities=20% Similarity=0.172 Sum_probs=151.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.. ......++++..|.++.++.||++|+++++++++++ ++
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGAS-VVVSDINAD---AANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCE-EEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCE-EEEEcCCHH---HHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999999997 888888742 233344556666778899999999999999999988 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|+||||||+....++ +.+.++|++.+++|+.|++++.+++.+.+. ..++||++||.++..+.++++.|+++|+
T Consensus 86 ~~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 164 (255)
T 1fmc_A 86 LGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKA 164 (255)
T ss_dssp HSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHH
Confidence 8999999999999877777 789999999999999999999988865432 3589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++.|++..+.+ |....++..|.+.
T Consensus 165 a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~ 193 (255)
T 1fmc_A 165 AASHLVRNMAFDLGEKNIRVNGIAPGAIL 193 (255)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEecccCc
Confidence 999999987765 6777777777654
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=9e-20 Score=209.22 Aligned_cols=179 Identities=17% Similarity=0.171 Sum_probs=151.5
Q ss_pred cCCCCeEEEEcCc--chHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Q psy1119 778 ADSNKSYIICGGL--GGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 778 ~~~~~~ylItGG~--gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
...++++|||||+ +|||+++|++|+++|++ |++++|+. . .+.++++...+.++.++.||+++.+++++++++
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~-V~~~~r~~--~---~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~ 96 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAE-LAFTYVGQ--F---KDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVE 96 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCE-EEEEECTT--C---HHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCE-EEEeeCch--H---HHHHHHHHHhcCCceEEEeecCCHHHHHHHHHH
Confidence 3568999999988 77999999999999997 88888885 1 123344444444688899999999999999999
Q ss_pred H-hhcCCccEEEECcccCCC----ccccC-CCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCC
Q psy1119 856 A-NKLGPVDGIFNLAVVLKD----ALFEN-QTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQ 928 (1392)
Q Consensus 856 ~-~~~g~I~gvi~~Agv~~d----~~~~~-~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq 928 (1392)
+ +.+++||+||||||+... ..+.+ .+.++|++.+++|+.|++++.+++.+++. ..+.||++||+++..+.+++
T Consensus 97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 176 (280)
T 3nrc_A 97 LGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSY 176 (280)
T ss_dssp HHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTT
T ss_pred HHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCc
Confidence 8 678999999999998764 44555 99999999999999999999998876553 46899999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 929 TNYGMANSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 929 ~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
+.|+++|+++++|++..+.+ |..+.+|..|.+..
T Consensus 177 ~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T 214 (280)
T 3nrc_A 177 NTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKT 214 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccc
Confidence 99999999999999987764 77888888887753
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.82 E-value=6.2e-20 Score=208.54 Aligned_cols=215 Identities=19% Similarity=0.197 Sum_probs=160.4
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechh
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFG 1228 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~G 1228 (1392)
+.++||||+|+++|++..|.+|++ |...+.++.++ .+++..+++++|+.+++.|+.. .+.+||.|+|||||
T Consensus 19 ~~~~~lv~lhg~~~~~~~~~~~~~-l~~~~~v~~~d~~G~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~l~GhS~G 95 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAFSYASLPR-LKSDTAVVGLNCPYARDPENMNCTHGAMIESFCNEIRRR--QPRGPYHLGGWSSG 95 (265)
T ss_dssp TSSEEEEEECCTTCCGGGGTTSCC-CSSSEEEEEEECTTTTCGGGCCCCHHHHHHHHHHHHHHH--CSSCCEEEEEETHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHh-cCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHh--CCCCCEEEEEECHh
Confidence 456899999999999999999999 98888888876 2445689999999999999854 36789999999999
Q ss_pred HHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCC--c-cccCCHHHHHHHHHHHHHHHHhh
Q psy1119 1229 GMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMP--E-DATHSRTYQRNLAHAAYKRITSI 1304 (1392)
Q Consensus 1229 g~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~--~-~~~~~~~~l~~~~~~~~~~~~~~ 1304 (1392)
|.||+++|++|++.+..+ .|+++|+.++.....+. ....+.++.+..... . ....+.+..+.+.+.+++++++.
T Consensus 96 g~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (265)
T 3ils_A 96 GAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLP--RAFYEHCNSIGLFATQPGASPDGSTEPPSYLIPHFTAVVDVM 173 (265)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCC--HHHHHHHHHTTTTTTSSSSCSSSCSCCCTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccC--HHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999888 88999987654322110 011222222211111 1 01123334455778889999999
Q ss_pred ccccCCCCCcccceEE-EEeeCC---CC-C--------------CChhhcCcccccC-CCeEEEEEcc-CccccccChHH
Q psy1119 1305 LKYTDPKHKAFGGNIT-LLRPTE---QA-L--------------PTAEDYGLSKVCK-KPVKVHFVDG-NHFTVLDNIKS 1363 (1392)
Q Consensus 1305 ~~y~~~~~~~~~~pi~-l~~a~~---~~-~--------------~~~~~~~W~~~~~-g~v~v~~v~G-~H~~ml~~~~~ 1363 (1392)
..|.+....++++|++ ++++++ |. . ......+|++++. ..++++.++| +||+|++.++.
T Consensus 174 ~~~~~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~i~gagH~~~~~~e~~ 253 (265)
T 3ils_A 174 LDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPGASFDIVRADGANHFTLMQKEHV 253 (265)
T ss_dssp TTCCCCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHSTTCCEEEEEEEEEETTGGGSTTTT
T ss_pred HhcCCCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhCCccceeEEEcCCCCcceeeChhhH
Confidence 9998876668999988 899988 65 3 3334568999887 6899999999 99999766666
Q ss_pred HHHHHhhhccc
Q psy1119 1364 AQIIMHEDSTD 1374 (1392)
Q Consensus 1364 ~~i~~~l~~~L 1374 (1392)
..+...|.+.|
T Consensus 254 ~~v~~~i~~fL 264 (265)
T 3ils_A 254 SIISDLIDRVM 264 (265)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 66666666654
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.3e-19 Score=204.61 Aligned_cols=176 Identities=18% Similarity=0.191 Sum_probs=147.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+.. ..+...+++ +.++.++.||++|.++++++++.+++
T Consensus 28 l~~k~vlVTGas~GIG~aia~~l~~~G~~-Vi~~~r~~~---~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~ 100 (281)
T 3ppi_A 28 FEGASAIVSGGAGGLGEATVRRLHADGLG-VVIADLAAE---KGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAANQ 100 (281)
T ss_dssp GTTEEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHTT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCChH---HHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 888898742 222333333 66789999999999999999999977
Q ss_pred cCCccEEEEC-cccCCCccc-----cCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--------CCCeEEEecccccccC
Q psy1119 859 LGPVDGIFNL-AVVLKDALF-----ENQTPEDFNASLGPKANATKYFDKYSRTMCP--------TLGQFVVFSSVSCGRG 924 (1392)
Q Consensus 859 ~g~I~gvi~~-Agv~~d~~~-----~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--------~l~~fV~~SS~s~~~G 924 (1392)
++++|++||| ||+.....+ .+.+.++|++.+++|+.|++++.+++.+.+. ..+.||++||+++..+
T Consensus 101 ~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 180 (281)
T 3ppi_A 101 LGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG 180 (281)
T ss_dssp SSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC
T ss_pred hCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC
Confidence 8999999999 666554444 4789999999999999999999988765432 3479999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 925 NAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 925 ~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
.++++.|+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 181 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 221 (281)
T 3ppi_A 181 QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMK 221 (281)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCC
Confidence 999999999999999999987766 6677788777663
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.82 E-value=6.2e-20 Score=208.88 Aligned_cols=168 Identities=21% Similarity=0.211 Sum_probs=146.4
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+..... ......+|+++.++++++++++ +
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~G~~-V~~~~r~~~~~~--------------~~~~~~~Dv~~~~~~~~~~~~~~~ 90 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAAGAR-VAVADRAVAGIA--------------ADLHLPGDLREAAYADGLPGAVAA 90 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEECSSCCTTSC--------------CSEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHH--------------hhhccCcCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 888898743211 1133589999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||+||||||+.....+.+++.++|++++++|+.|++++.+++.+++. ..+.||++||+++..+.++++.|+++|
T Consensus 91 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 170 (266)
T 3uxy_A 91 GLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTK 170 (266)
T ss_dssp HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHH
Confidence 799999999999999999999999999999999999999999998866543 468999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |..+.+|..|.+.
T Consensus 171 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 200 (266)
T 3uxy_A 171 AALASLTQCMGMDHAPQGIRINAVCPNEVN 200 (266)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEeeCCCc
Confidence 9999999988766 6667777777653
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-19 Score=204.05 Aligned_cols=177 Identities=21% Similarity=0.233 Sum_probs=150.2
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEe-cCCCcccHHHHHHHHHHhcCCceEEE-EeccCCCHHHHHHHHHHH-h
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLT-SRSGVKNGYQALRIKIWKSYDVQVLI-STDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~-sRs~~~~~~~~~~~~~l~~~G~~v~~-~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
++++|||||+||||+++|++|+++|++ |+++ +|+.. ..+...++++..|.++.. +.||++|.++++++++++ +
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~-v~~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFA-LAIHYGQNRE---KAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAE 76 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCE-EEEEESSCHH---HHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHH---HHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHH
Confidence 368999999999999999999999997 5555 88742 233344555666767776 899999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
.++++|+||||||+....++.+.+.++|++.+++|+.|++++.+++.+.+. ..++||++||.++..+.++++.|+++|
T Consensus 77 ~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 156 (245)
T 2ph3_A 77 VLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASK 156 (245)
T ss_dssp HHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHH
Confidence 689999999999998888899999999999999999999999887765442 358999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++++.|++..+.+ |++..++.+|.+.
T Consensus 157 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 186 (245)
T 2ph3_A 157 AGLIGFTRAVAKEYAQRGITVNAVAPGFIE 186 (245)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHHcCeEEEEEEEEeec
Confidence 9999999887665 7778888887663
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=206.54 Aligned_cols=175 Identities=17% Similarity=0.154 Sum_probs=149.1
Q ss_pred CCCeEEEEcC--cchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 780 SNKSYIICGG--LGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 780 ~~~~ylItGG--~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
.++++||||| +||||+++|++|+++|++ |++++|+... ..+.. .+..+.++.++.||++|+++++++++++
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~-V~~~~r~~~~--~~~~~---~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQ-LVLTGFDRLR--LIQRI---TDRLPAKAPLLELDVQNEEHLASLAGRVT 79 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCE-EEEEECSCHH--HHHHH---HTTSSSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCE-EEEEecChHH--HHHHH---HHhcCCCceEEEccCCCHHHHHHHHHHHH
Confidence 5789999999 999999999999999997 8888887421 11111 2234567888999999999999999998
Q ss_pred hhcC---CccEEEECcccCC-----CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCC
Q psy1119 857 NKLG---PVDGIFNLAVVLK-----DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQ 928 (1392)
Q Consensus 857 ~~~g---~I~gvi~~Agv~~-----d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq 928 (1392)
+++| +||+||||||+.. ..++.+++.++|++++++|+.|++++.+++.+.+.+.+.||++||.++ .+.+++
T Consensus 80 ~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~~~~ 158 (269)
T 2h7i_A 80 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAMPAY 158 (269)
T ss_dssp HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCCTTT
T ss_pred HHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-cccCch
Confidence 6788 9999999999876 578899999999999999999999999998776554589999999876 788999
Q ss_pred hhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 929 TNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 929 ~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+.|+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 159 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~ 195 (269)
T 2h7i_A 159 NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIR 195 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccc
Confidence 99999999999999988766 7788888888763
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=205.65 Aligned_cols=170 Identities=21% Similarity=0.233 Sum_probs=146.0
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+.... ...++.++.||++|+++++++++++ +
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~------------~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 92 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNYR-VVATSRSIKPS------------ADPDIHTVAGDISKPETADRIVREGIE 92 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESSCCCC------------SSTTEEEEESCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChhhc------------ccCceEEEEccCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 88888875321 1235888999999999999999998 7
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccc--cCCCCChhHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCG--RGNAGQTNYGM 933 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~--~G~~gq~~Yaa 933 (1392)
++|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+ ...+.||++||.++. .+.++.+.|++
T Consensus 93 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~ 172 (260)
T 3un1_A 93 RFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASL 172 (260)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHH
T ss_pred HCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHH
Confidence 79999999999999999999999999999999999999999998875544 245899999998876 45667799999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+|+++++|++..+.+ |+++.+|..|.+.
T Consensus 173 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 204 (260)
T 3un1_A 173 TKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIK 204 (260)
T ss_dssp HHHHHHHHHHHHHHHTTTTTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHhCcCCeEEEEEeecCCC
Confidence 999999999998877 5566677776653
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-19 Score=200.19 Aligned_cols=171 Identities=18% Similarity=0.165 Sum_probs=144.5
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
+++|||||+||||+++|++|+++|++ |++++|+.. ..+... +..+.++.++.+|+++.++++++++++.+ .
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~---~~~~~~---~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~ 72 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKA-TYLTGRSES---KLSTVT---NCLSNNVGYRARDLASHQEVEQLFEQLDS--I 72 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCHH---HHHHHH---HTCSSCCCEEECCTTCHHHHHHHHHSCSS--C
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHH---HHHhhccCeEeecCCCHHHHHHHHHHHhh--c
Confidence 58999999999999999999999997 888899742 122222 23467788899999999999999988743 2
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC-CCeEEEecccccccCCCCChhHHHHHHHHHH
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT-LGQFVVFSSVSCGRGNAGQTNYGMANSIMER 940 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~-l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~ 940 (1392)
.|+||||||+....++.+++.++|++.+++|+.|++++.+++.+.+.+ .+.||++||.++..+.++++.|+++|+++++
T Consensus 73 ~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 152 (230)
T 3guy_A 73 PSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKG 152 (230)
T ss_dssp CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHHHHHHHHH
Confidence 399999999999999999999999999999999999999988765433 3599999999999999999999999999999
Q ss_pred HHHHHHHc----CCCeEEEEccccC
Q psy1119 941 ICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 941 la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|++..+.+ |....+|..|.+.
T Consensus 153 ~~~~la~e~~~~gi~v~~v~PG~v~ 177 (230)
T 3guy_A 153 LIESVRLELKGKPMKIIAVYPGGMA 177 (230)
T ss_dssp HHHHHHHHTTTSSCEEEEEEECCC-
T ss_pred HHHHHHHHHHhcCeEEEEEECCccc
Confidence 99998887 5666777777653
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.82 E-value=7e-20 Score=214.75 Aligned_cols=179 Identities=17% Similarity=0.054 Sum_probs=150.8
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHH---hcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIW---KSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l---~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
++++|||||+||||+++|++|+++|++ ++++.|+..........++.. ...+.++.++.||++|.++++++++.+.
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~-v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQ-SFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTC-CEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCc-eEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 578999999999999999999999998 666666543333222333332 2345678899999999999999999873
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+++||+||||||+....++.+++.++|++++++|+.|++++.+++.+++. ..++||++||+++..+.++++.|+++|
T Consensus 81 -~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK 159 (327)
T 1jtv_A 81 -EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASK 159 (327)
T ss_dssp -TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred -cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHH
Confidence 58999999999998888899999999999999999999999998866542 458999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |+.+.+|..|.+.
T Consensus 160 ~a~~~~~~~la~el~~~gI~v~~v~PG~v~ 189 (327)
T 1jtv_A 160 FALEGLCESLAVLLLPFGVHLSLIECGPVH 189 (327)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEeCccc
Confidence 9999999988774 7888888888764
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=208.39 Aligned_cols=174 Identities=17% Similarity=0.141 Sum_probs=143.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||++|||+++|+.|+++|++ |++++|+.. ..++.. +..|.++.++.||+++.++++++++++ ++
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~---~~~~~~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGAR-VAVLDKSAE---RLRELE---VAHGGNAVGVVGDVRSLQDQKRAAERCLAA 76 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHH---HHTBTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEeCCHH---HHHHHH---HHcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999999997 888888732 122222 234678999999999999999999998 77
Q ss_pred cCCccEEEECcccCCC-ccc----cCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-CCCCeEEEecccccccCCCCChhHH
Q psy1119 859 LGPVDGIFNLAVVLKD-ALF----ENQTPEDFNASLGPKANATKYFDKYSRTMC-PTLGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d-~~~----~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~~l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
+|+||++|||||+... ..+ .+.+.++|++++++|+.|++++.+++.+++ ...+.||++||+++..+.++++.|+
T Consensus 77 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 156 (281)
T 3zv4_A 77 FGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYT 156 (281)
T ss_dssp HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSCHHHH
T ss_pred cCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCCchhH
Confidence 9999999999998643 233 356678899999999999999999886654 2348999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCC---eEEEEcccc
Q psy1119 933 MANSIMERICEARRAEGLP---GLAVEWGAV 960 (1392)
Q Consensus 933 aana~ld~la~~r~~~Glp---~~ai~~g~~ 960 (1392)
++|+++++|++..+.+..| +.+|..|.+
T Consensus 157 asKaa~~~l~~~la~e~~~~Irvn~v~PG~v 187 (281)
T 3zv4_A 157 ATKHAVVGLVRQMAFELAPHVRVNGVAPGGM 187 (281)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSEEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEEECCcC
Confidence 9999999999998877433 455555544
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=9.1e-19 Score=200.69 Aligned_cols=179 Identities=16% Similarity=0.150 Sum_probs=150.1
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCC--ceEEEEeccCCCHHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYD--VQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G--~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+... .....++++..| .++.++.||++|+++++++++++
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~-V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 105 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLK-VVGCARTVGN---IEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI 105 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEECChHH---HHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHH
Confidence 46899999999999999999999999997 8888887422 233344555544 57888999999999999999988
Q ss_pred -hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--C--CCeEEEecccccc--cCCCCCh
Q psy1119 857 -NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--T--LGQFVVFSSVSCG--RGNAGQT 929 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~--l~~fV~~SS~s~~--~G~~gq~ 929 (1392)
+.++++|+||||||+.....+.+.+.++|++.+++|+.|++++.+.+.+.+. . .+.||++||+++. .+.++..
T Consensus 106 ~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~ 185 (279)
T 1xg5_A 106 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTH 185 (279)
T ss_dssp HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGH
T ss_pred HHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCc
Confidence 6789999999999998888899999999999999999999998877655442 2 2799999999988 6778899
Q ss_pred hHHHHHHHHHHHHHHHHHc------CCCeEEEEccccC
Q psy1119 930 NYGMANSIMERICEARRAE------GLPGLAVEWGAVG 961 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~------Glp~~ai~~g~~~ 961 (1392)
.|+++|++++.|++..+.+ |++..+|..|.+.
T Consensus 186 ~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~ 223 (279)
T 1xg5_A 186 FYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVE 223 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBC
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCccc
Confidence 9999999999999876643 6777888887664
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=205.17 Aligned_cols=177 Identities=19% Similarity=0.195 Sum_probs=148.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+.. ......++++..|.++.++.||++|+++++++++.+ ++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGAT-VYITGRHLD---TLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDRE 79 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 4789999999999999999999999997 888888742 233344555555778999999999999999999998 44
Q ss_pred -cCCccEEEECcc--cC-----CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCC
Q psy1119 859 -LGPVDGIFNLAV--VL-----KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQ 928 (1392)
Q Consensus 859 -~g~I~gvi~~Ag--v~-----~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq 928 (1392)
+|+||+|||||| +. ...++.+++.++|+++++.|+.|++++.+++.+.+. ..+.||++||+++..+. ++
T Consensus 80 ~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~ 158 (260)
T 2qq5_A 80 QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FN 158 (260)
T ss_dssp HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SS
T ss_pred cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CC
Confidence 899999999994 43 456788999999999999999999999888765442 34899999999987754 57
Q ss_pred hhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 929 TNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 929 ~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+.|+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 159 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 195 (260)
T 2qq5_A 159 VPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQ 195 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSC
T ss_pred CchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccc
Confidence 89999999999999987754 7888899988764
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2e-19 Score=204.31 Aligned_cols=176 Identities=24% Similarity=0.253 Sum_probs=149.0
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+..... ...+++ +.++.++.||++|+++++++++++ +
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~-V~~~~r~~~~~~---~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGAS-AVLLDLPNSGGE---AQAKKL---GNNCVFAPADVTSEKDVQTALALAKG 82 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECTTSSHH---HHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCcHhHH---HHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999997 888888854332 222333 567889999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCcccc------CCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--------CCCeEEEeccccccc
Q psy1119 858 KLGPVDGIFNLAVVLKDALFE------NQTPEDFNASLGPKANATKYFDKYSRTMCP--------TLGQFVVFSSVSCGR 923 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~------~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--------~l~~fV~~SS~s~~~ 923 (1392)
+++++|+||||||+.....+. +.+.++|++.+++|+.|++++.+++.+.+. ..++||++||+++..
T Consensus 83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 162 (265)
T 2o23_A 83 KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE 162 (265)
T ss_dssp HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred HCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC
Confidence 789999999999987766554 389999999999999999999998866543 347899999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 924 GNAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 924 G~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+.++++.|+++|+++++|++..+.+ |+...+|..|.+.
T Consensus 163 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 204 (265)
T 2o23_A 163 GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFG 204 (265)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEecccc
Confidence 9999999999999999999987765 7778888887663
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-19 Score=210.69 Aligned_cols=181 Identities=13% Similarity=0.031 Sum_probs=145.3
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHH-hCCceEEEecCCCcccHH---------HHHHHHHHhcCCceEEEEeccCCCHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVL-RGARKLVLTSRSGVKNGY---------QALRIKIWKSYDVQVLISTDDITTEAG 848 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~-~GAr~lvl~sRs~~~~~~---------~~~~~~~l~~~G~~v~~~~~Dv~~~~~ 848 (1392)
..+|++|||||++|||+++|+.|++ +||+ |++++|+...... .+...++++..|.++..+.||++++++
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~-Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~ 123 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCGAD-TLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEI 123 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHCCE-EEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcCCE-EEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence 4678999999999999999999999 9997 7777776443221 112233456678899999999999999
Q ss_pred HHHHHHHH-hhcCCccEEEECcccC-------------CCccc---------------------cCCCHHHHHHHHhhHh
Q psy1119 849 VVNLLTEA-NKLGPVDGIFNLAVVL-------------KDALF---------------------ENQTPEDFNASLGPKA 893 (1392)
Q Consensus 849 v~~l~~~~-~~~g~I~gvi~~Agv~-------------~d~~~---------------------~~~t~e~~~~~~~~kv 893 (1392)
++++++++ +++|+||++|||||+. ..+++ ++++.++|+++++++.
T Consensus 124 v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~ 203 (405)
T 3zu3_A 124 KQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMG 203 (405)
T ss_dssp HHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhc
Confidence 99999998 7799999999999975 23444 8899999999999999
Q ss_pred HHHH-HHHHHH-hhhC-CCCCeEEEecccccccCCCCC--hhHHHHHHHHHHHHHHHHHc-----CCCeEEEEcccc
Q psy1119 894 NATK-YFDKYS-RTMC-PTLGQFVVFSSVSCGRGNAGQ--TNYGMANSIMERICEARRAE-----GLPGLAVEWGAV 960 (1392)
Q Consensus 894 ~g~~-~L~~~~-~~~~-~~l~~fV~~SS~s~~~G~~gq--~~Yaaana~ld~la~~r~~~-----Glp~~ai~~g~~ 960 (1392)
.+.| .+.+++ ...+ ...+.+|++||+++..+.++. +.|++||+++++|++..+.+ |..+-+|..|.+
T Consensus 204 ~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i 280 (405)
T 3zu3_A 204 GEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAV 280 (405)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCC
T ss_pred hhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCC
Confidence 9998 565544 3322 234789999999999999987 99999999999999998876 445556666554
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2e-19 Score=203.02 Aligned_cols=176 Identities=19% Similarity=0.190 Sum_probs=150.1
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceE-EEEeccCCCHHHHHHHHHHHh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQV-LISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v-~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+... .+...+++ |.++ ..+.+|++|.++++++++.+.
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~~-V~~~~r~~~~---~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGAR-LILIDREAAA---LDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAE 81 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHH
Confidence 35789999999999999999999999997 8888887422 22223333 4566 889999999999999999984
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCC--hhHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQ--TNYGM 933 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq--~~Yaa 933 (1392)
+++++|+||||||+.....+.+.+.++|++.+++|+.|++++.+++.+.+. ..++||++||.++..+.+++ +.|++
T Consensus 82 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~ 161 (254)
T 2wsb_A 82 AVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMA 161 (254)
T ss_dssp HHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHH
T ss_pred hhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHH
Confidence 489999999999998888899999999999999999999999988765442 45899999999999999998 99999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+|++++.|++..+.+ |++..++.+|.+.
T Consensus 162 sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~ 193 (254)
T 2wsb_A 162 SKGAVHQLTRALAAEWAGRGVRVNALAPGYVA 193 (254)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEEecccC
Confidence 999999999987765 7888888887764
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.82 E-value=8.9e-20 Score=205.99 Aligned_cols=167 Identities=28% Similarity=0.314 Sum_probs=141.6
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+....+ ++..+.||++|+++++++++++ +
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~--------------~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAIARAFADAGDK-VAITYRSGEPPE--------------GFLAVKCDITDTEQVEQAYKEIEE 83 (253)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSSCCCT--------------TSEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChHhhc--------------cceEEEecCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999997 888888753321 1567899999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|+++|
T Consensus 84 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 163 (253)
T 2nm0_A 84 THGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASK 163 (253)
T ss_dssp HTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHH
Confidence 799999999999999888899999999999999999999999988766442 457999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++++|++..+.+ |+...+|..|.+
T Consensus 164 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v 192 (253)
T 2nm0_A 164 AGLVGFARSLARELGSRNITFNVVAPGFV 192 (253)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEEEEECSB
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEEeCcC
Confidence 9999999987765 555666666654
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=204.59 Aligned_cols=166 Identities=21% Similarity=0.278 Sum_probs=135.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+...... + ..+.||++|+++++++++++ +.
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~-------~-------~~~~~D~~~~~~~~~~~~~~~~~ 78 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGHK-VAVTHRGSGAPKG-------L-------FGVEVDVTDSDAVDRAFTAVEEH 78 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSSCCCTT-------S-------EEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChHHHHH-------h-------cCeeccCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 8888887533211 1 13789999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+++||+||||||+....++.+++.++|++++++|+.|++++.+++.+.+ ...+.||++||.++..|.++++.|+++|+
T Consensus 79 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 158 (247)
T 1uzm_A 79 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKA 158 (247)
T ss_dssp HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHH
Confidence 8999999999999888899999999999999999999999999886654 24589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++++|++..+.+ |+...+|..|.+
T Consensus 159 a~~~~~~~la~e~~~~gi~v~~v~PG~v 186 (247)
T 1uzm_A 159 GVIGMARSIARELSKANVTANVVAPGYI 186 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEEeCCC
Confidence 999999987765 667777777766
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=202.78 Aligned_cols=167 Identities=17% Similarity=0.190 Sum_probs=146.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHH-hCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVL-RGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~-~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
.++++|||||+||||+++|+.|++ .|+ +|++++|+... ...++..+.||++|+++++++++.++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~-~v~~~~~~~~~-------------~~~~~~~~~~Dv~~~~~v~~~~~~~~- 67 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNH-TVINIDIQQSF-------------SAENLKFIKADLTKQQDITNVLDIIK- 67 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTE-EEEEEESSCCC-------------CCTTEEEEECCTTCHHHHHHHHHHTT-
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCc-EEEEecccccc-------------ccccceEEecCcCCHHHHHHHHHHHH-
Confidence 467999999999999999999999 565 48888887431 12246789999999999999996656
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
+++||++|||||+....++.+++.++|++++++|+.|++++.+++.+.+.+.+.||++||.++..+.++++.|+++|+++
T Consensus 68 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asKaa~ 147 (244)
T 4e4y_A 68 NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAI 147 (244)
T ss_dssp TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHHHHHHHH
T ss_pred hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhHHHHHHH
Confidence 78999999999999999999999999999999999999999999877665557999999999999999999999999999
Q ss_pred HHHHHHHHHc----CCCeEEEEccccC
Q psy1119 939 ERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 939 d~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++|++..+.+ |..+.+|..|.+.
T Consensus 148 ~~~~~~la~e~~~~gi~v~~v~PG~v~ 174 (244)
T 4e4y_A 148 AQMTKSLALDLAKYQIRVNTVCPGTVD 174 (244)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEESCBC
T ss_pred HHHHHHHHHHHHHcCeEEEEEecCccC
Confidence 9999988754 7888888888763
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.3e-19 Score=203.02 Aligned_cols=179 Identities=22% Similarity=0.195 Sum_probs=150.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+.. ......+++...+ ++.++.||++|+++++++++++ +
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~ 88 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRYGAK-VVIADIADD---HGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIA 88 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEcCChh---HHHHHHHHhCCCC-ceEEEECCCCCHHHHHHHHHHHHH
Confidence 36799999999999999999999999996 888888742 2223334443322 6888999999999999999998 6
Q ss_pred hcCCccEEEECcccCCC--ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCC-CChhHH
Q psy1119 858 KLGPVDGIFNLAVVLKD--ALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNA-GQTNYG 932 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d--~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~-gq~~Ya 932 (1392)
.++++|+||||||+... .++.+.+.++|++.+++|+.|++++.+++.+.+. ..++||++||.++..+.+ ++..|+
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~ 168 (278)
T 2bgk_A 89 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYT 168 (278)
T ss_dssp HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHH
T ss_pred HcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchH
Confidence 78999999999998753 6788999999999999999999999998866542 357999999999999888 899999
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
++|++++.|++..+.+ |++..++..|.+..
T Consensus 169 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t 202 (278)
T 2bgk_A 169 ATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVAS 202 (278)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSC
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecc
Confidence 9999999999988764 88888888887643
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=203.17 Aligned_cols=168 Identities=14% Similarity=0.147 Sum_probs=144.5
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+..... ..+..+.||++|+++++++++++ +
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~-------------~~~~~~~~D~~~~~~v~~~~~~~~~ 70 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWW-VASIDVVENEEA-------------SASVIVKMTDSFTEQADQVTAEVGK 70 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCE-EEEEESSCCTTS-------------SEEEECCCCSCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCE-EEEEeCChhhcc-------------CCcEEEEcCCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999997 888899853321 13567899999999999999998 6
Q ss_pred hc--CCccEEEECcccCCCccc-cCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KL--GPVDGIFNLAVVLKDALF-ENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~--g~I~gvi~~Agv~~d~~~-~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
++ +++|+||||||+....++ .+.+.++|++.++.|+.|++++.+++.+.+.+.+.||++||.++..+.++++.|+++
T Consensus 71 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 150 (241)
T 1dhr_A 71 LLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMA 150 (241)
T ss_dssp HHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred HhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHHHHH
Confidence 67 799999999999888888 889999999999999999999999887765445799999999999999999999999
Q ss_pred HHHHHHHHHHHHHc------CCCeEEEEcccc
Q psy1119 935 NSIMERICEARRAE------GLPGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~------Glp~~ai~~g~~ 960 (1392)
|+++++|++..+.+ |+...+|..|.+
T Consensus 151 K~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v 182 (241)
T 1dhr_A 151 KGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTL 182 (241)
T ss_dssp HHHHHHHHHHHTSTTSSCCTTCEEEEEEESCE
T ss_pred HHHHHHHHHHHHHHhccCCCCeEEEEEecCcc
Confidence 99999999998765 344566666644
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-19 Score=203.80 Aligned_cols=178 Identities=19% Similarity=0.220 Sum_probs=152.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCC-CcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRS-GVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs-~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+ ... .....++++..|.++.++.||++|.++++++++++ +
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~-V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAK-VGLHGRKAPAN---IDETIASMRADGGDAAFFAADLATSEACQQLVDEFVA 81 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCCTT---HHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEECCCchhh---HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 5789999999999999999999999997 8888887 432 22334555666888999999999999999999988 6
Q ss_pred hcCCccEEEECccc-CCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-C---C---CeEEEeccccccc-CCCCC
Q psy1119 858 KLGPVDGIFNLAVV-LKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-T---L---GQFVVFSSVSCGR-GNAGQ 928 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv-~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~---l---~~fV~~SS~s~~~-G~~gq 928 (1392)
+++++|+||||||+ ....++.+.+.++|+.++++|+.|++++.+++.+.+. . . +.||++||+++.. +.+++
T Consensus 82 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~ 161 (258)
T 3afn_B 82 KFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGA 161 (258)
T ss_dssp HHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTC
T ss_pred HcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCc
Confidence 78999999999998 6677889999999999999999999999987755432 1 2 7899999999988 88999
Q ss_pred hhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 929 TNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 929 ~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+.|+++|++++.|++..+.+ |++..++..|.+.
T Consensus 162 ~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~ 198 (258)
T 3afn_B 162 GLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVD 198 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBS
T ss_pred hHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcc
Confidence 99999999999999987665 7888888888764
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-19 Score=210.84 Aligned_cols=177 Identities=19% Similarity=0.215 Sum_probs=148.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCC------cccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSG------VKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLL 853 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~------~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~ 853 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|.. .+....+...++++..|..+ .+|+++.+++++++
T Consensus 8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~-Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~---~~D~~~~~~~~~~~ 83 (319)
T 1gz6_A 8 DGRVVLVTGAGGGLGRAYALAFAERGAL-VVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA---VANYDSVEAGEKLV 83 (319)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEE---EEECCCGGGHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEcCCcccccccCCHHHHHHHHHHHHhhCCeE---EEeCCCHHHHHHHH
Confidence 5799999999999999999999999997 66654421 11233344455666666554 47999999999999
Q ss_pred HHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChh
Q psy1119 854 TEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTN 930 (1392)
Q Consensus 854 ~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~ 930 (1392)
+++ +.+++||+||||||+....++.+++.++|+.++++|+.|+++|.+++.+.+. ..++||++||+++..|.+++++
T Consensus 84 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~ 163 (319)
T 1gz6_A 84 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQAN 163 (319)
T ss_dssp HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHH
Confidence 987 6799999999999999888899999999999999999999999998866542 3589999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 931 YGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
|+++|++++.|++..+.+ |+.+.+|..|.+
T Consensus 164 Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~ 197 (319)
T 1gz6_A 164 YSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG 197 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence 999999999999988766 667788888765
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.7e-19 Score=202.02 Aligned_cols=180 Identities=22% Similarity=0.209 Sum_probs=151.0
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHh-cCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK-SYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~-~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+....... .+++. ..+.++.++.||++|.++++++++.+
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~~-V~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 87 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGAN-VAVIYRSAADAVEV---TEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID 87 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEE-EEEEESSCTTHHHH---HHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCcchhhHHH---HHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHH
Confidence 35789999999999999999999999996 88888875432222 22222 23667889999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccCCCC------
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRGNAG------ 927 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G~~g------ 927 (1392)
+.++++|+||||||+....++.+++.++|++.+++|+.|++++.+++.+.+. ..++||++||.++..+.++
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~ 167 (265)
T 1h5q_A 88 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSL 167 (265)
T ss_dssp HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEEC
T ss_pred HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccc
Confidence 6689999999999998888999999999999999999999999998865432 2378999999998877654
Q ss_pred -ChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 928 -QTNYGMANSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 928 -q~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
++.|+++|++++.|++..+.+ |++..++..|.+..
T Consensus 168 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t 207 (265)
T 1h5q_A 168 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNT 207 (265)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccc
Confidence 889999999999999987765 78888888887643
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-19 Score=200.81 Aligned_cols=168 Identities=18% Similarity=0.207 Sum_probs=145.7
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
++++|||||+||||+++|+.|+++|++ |++++|+... ..+++ | +..+.+|+++ ++++++++++ +.+
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~-V~~~~r~~~~------~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~ 68 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYR-VAIASRNPEE------AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEAL 68 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCHH------HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHH------HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHc
Confidence 578999999999999999999999997 8888998522 12223 4 6678999999 9999999988 678
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCC--CCChhHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGN--AGQTNYGMAN 935 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~--~gq~~Yaaan 935 (1392)
+++|++|||||+....++.+++.++|++.+++|+.|++++.+++.+.+. ..+.||++||+++..+. ++.+.|+++|
T Consensus 69 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK 148 (239)
T 2ekp_A 69 GGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAK 148 (239)
T ss_dssp TSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHH
Confidence 9999999999998888999999999999999999999999998866542 35899999999999888 9999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++++|++..+.+ |.+..+|..|.+.
T Consensus 149 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 178 (239)
T 2ekp_A 149 TALLGLTRALAKEWARLGIRVNLLCPGYVE 178 (239)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEeCCcc
Confidence 9999999988766 7778888887663
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-19 Score=202.83 Aligned_cols=166 Identities=14% Similarity=0.120 Sum_probs=143.6
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.-++++|||||+||||+++|++|+++|++ |++++|+..... -..+.+|++|.++++++++++ +
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~~~~~~---------------~~~~~~d~~d~~~v~~~~~~~~~ 83 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWN-TISIDFRENPNA---------------DHSFTIKDSGEEEIKSVIEKINS 83 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCCTTS---------------SEEEECSCSSHHHHHHHHHHHHT
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCccccc---------------ccceEEEeCCHHHHHHHHHHHHH
Confidence 34789999999999999999999999997 888899854321 124689999999999999998 6
Q ss_pred hcCCccEEEECcccCCCcc-ccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDAL-FENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~-~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++||+||||||+..... +.+.+.++|++.+++|+.|++++.+++.+.+.+.+.||++||+++..+.++.+.|+++|+
T Consensus 84 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa 163 (251)
T 3orf_A 84 KSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKA 163 (251)
T ss_dssp TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred HcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHHHH
Confidence 7899999999999987765 788999999999999999999999998776655679999999999999999999999999
Q ss_pred HHHHHHHHHHHc------CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE------GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~------Glp~~ai~~g~~ 960 (1392)
++++|++..+.+ |....+|..|.+
T Consensus 164 a~~~~~~~la~e~~~~~~gi~v~~v~PG~v 193 (251)
T 3orf_A 164 ATHHIIKDLASENGGLPAGSTSLGILPVTL 193 (251)
T ss_dssp HHHHHHHHHTSTTSSSCTTCEEEEEEESCB
T ss_pred HHHHHHHHHHHHhcccCCCcEEEEEecCcC
Confidence 999999998877 445667776655
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.1e-19 Score=197.94 Aligned_cols=173 Identities=17% Similarity=0.112 Sum_probs=144.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+.. ..+...+++. ++..+.||++|.++++++++.+ +.
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYR-VGLMARDEK---RLQALAAELE----GALPLPGDVREEGDWARAVAAMEEA 75 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEECCHH---HHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999997 888888742 1222222221 4677899999999999999998 66
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++++|+||||||+....++.+.+.++|++.+++|+.|++++.+.+.+.+. ..+.||++||+++..+.++++.|+++|+
T Consensus 76 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 155 (234)
T 2ehd_A 76 FGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKF 155 (234)
T ss_dssp HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHH
Confidence 89999999999998888899999999999999999999999887755442 3589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++++|++..+.+ |+...++..|.+
T Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~Pg~v 183 (234)
T 2ehd_A 156 GLLGLAGAAMLDLREANVRVVNVLPGSV 183 (234)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEECC--
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEEeCCC
Confidence 999998876654 777788887765
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-19 Score=208.78 Aligned_cols=178 Identities=20% Similarity=0.145 Sum_probs=145.2
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC-CceEEEEeccCCCH-HHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY-DVQVLISTDDITTE-AGVVNLLTEA 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~-G~~v~~~~~Dv~~~-~~v~~l~~~~ 856 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+... .....++++.. +.++.++.||+++. ++++++++.+
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~-V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~ 85 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGIM-VVLTCRDVTK---GHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFI 85 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHH
Confidence 46899999999999999999999999996 8999998532 33344555554 45789999999998 9999999998
Q ss_pred -hhcCCccEEEECcccCCC------------------------------ccccCCCHHHHHHHHhhHhHHHHHHHHHHhh
Q psy1119 857 -NKLGPVDGIFNLAVVLKD------------------------------ALFENQTPEDFNASLGPKANATKYFDKYSRT 905 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d------------------------------~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~ 905 (1392)
+.+++||+||||||+... ..+.+.+.++|++++++|+.|++++.+++.+
T Consensus 86 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 165 (311)
T 3o26_A 86 KTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP 165 (311)
T ss_dssp HHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence 668999999999998742 2466789999999999999999999998876
Q ss_pred hCC--CCCeEEEecccccccCC-------------------------------------------CCChhHHHHHHHHHH
Q psy1119 906 MCP--TLGQFVVFSSVSCGRGN-------------------------------------------AGQTNYGMANSIMER 940 (1392)
Q Consensus 906 ~~~--~l~~fV~~SS~s~~~G~-------------------------------------------~gq~~Yaaana~ld~ 940 (1392)
++. ..++||++||.++..+. ++++.|+++|+++++
T Consensus 166 ~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~ 245 (311)
T 3o26_A 166 LLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNA 245 (311)
T ss_dssp HHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHH
T ss_pred hhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHH
Confidence 653 34799999999987764 577899999999999
Q ss_pred HHHHHHHcC--CCeEEEEcccc
Q psy1119 941 ICEARRAEG--LPGLAVEWGAV 960 (1392)
Q Consensus 941 la~~r~~~G--lp~~ai~~g~~ 960 (1392)
|++..+.+. ..+.+|..|.+
T Consensus 246 ~~~~la~e~~~i~v~~v~PG~v 267 (311)
T 3o26_A 246 YTRVLANKIPKFQVNCVCPGLV 267 (311)
T ss_dssp HHHHHHHHCTTSEEEEECCCSB
T ss_pred HHHHHHhhcCCceEEEecCCce
Confidence 999988874 33455555544
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-19 Score=201.20 Aligned_cols=167 Identities=14% Similarity=0.177 Sum_probs=144.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.++++|||||+||||+++|++|+++|++ |++++|+..... ..+..+.||++|.++++++++++ +.
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~ 67 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYT-VLNIDLSANDQA-------------DSNILVDGNKNWTEQEQSILEQTASS 67 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEE-EEEEESSCCTTS-------------SEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEecCccccc-------------cccEEEeCCCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999996 888899853311 13567899999999999999998 66
Q ss_pred c--CCccEEEECcccCCCccc-cCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 L--GPVDGIFNLAVVLKDALF-ENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~--g~I~gvi~~Agv~~d~~~-~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+ +++|+||||||+....++ .+.+.++|++.++.|+.|++++.+++.+.+.+.++||++||.++..+.++++.|+++|
T Consensus 68 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 147 (236)
T 1ooe_A 68 LQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAK 147 (236)
T ss_dssp HTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred hCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHHHHH
Confidence 7 799999999999888888 8899999999999999999999998877654457999999999999999999999999
Q ss_pred HHHHHHHHHHHHc------CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE------GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~------Glp~~ai~~g~~ 960 (1392)
+++++|++..+.+ |+...+|..|.+
T Consensus 148 ~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v 178 (236)
T 1ooe_A 148 AAVHHLTSSLAAKDSGLPDNSAVLTIMPVTL 178 (236)
T ss_dssp HHHHHHHHHHHSTTSSCCTTCEEEEEEESCB
T ss_pred HHHHHHHHHHHHHhcccCCCeEEEEEecCcc
Confidence 9999999998766 345667776654
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=8.4e-19 Score=203.40 Aligned_cols=179 Identities=18% Similarity=0.163 Sum_probs=152.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-----CCceEEEEeccCCCHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-----YDVQVLISTDDITTEAGVVNLL 853 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-----~G~~v~~~~~Dv~~~~~v~~l~ 853 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+... .....++++. .+.++.++.||+++.+++++++
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~~~G~~-V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 91 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELLELGSN-VVIASRKLER---LKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV 91 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHH
Confidence 45789999999999999999999999997 8888887422 2233344443 4778999999999999999999
Q ss_pred HHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhh-C-CCCCeEEEecccccccCCCCChh
Q psy1119 854 TEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTM-C-PTLGQFVVFSSVSCGRGNAGQTN 930 (1392)
Q Consensus 854 ~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~-~-~~l~~fV~~SS~s~~~G~~gq~~ 930 (1392)
+.+ +.+|++|+||||||+....++.+.+.++|++.+++|+.|++++.+++.+. + ...+.||++||.+ ..+.+++..
T Consensus 92 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~ 170 (303)
T 1yxm_A 92 KSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVH 170 (303)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchh
Confidence 998 67899999999999888888999999999999999999999999987652 2 1357899999998 888999999
Q ss_pred HHHHHHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 931 YGMANSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
|+++|+++.+|++..+.+ |++..+|..|.+..
T Consensus 171 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t 206 (303)
T 1yxm_A 171 SGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYS 206 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCC
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCccc
Confidence 999999999999988776 77788888887643
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.5e-19 Score=211.82 Aligned_cols=181 Identities=14% Similarity=0.044 Sum_probs=145.5
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHH-hCCceEEEecCCCcccHH---------HHHHHHHHhcCCceEEEEeccCCCHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVL-RGARKLVLTSRSGVKNGY---------QALRIKIWKSYDVQVLISTDDITTEAGV 849 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~-~GAr~lvl~sRs~~~~~~---------~~~~~~~l~~~G~~v~~~~~Dv~~~~~v 849 (1392)
.+|++|||||++|||+++|+.|++ +||+ |++++|+...... .....++++..|.++..+.||+++++++
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~-Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v 138 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGAD-TLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR 138 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCE-EEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCE-EEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence 478999999999999999999999 9998 7778887543221 1122345567788999999999999999
Q ss_pred HHHHHHH-hhc-CCccEEEECcccC-------------CCccc---------------------cCCCHHHHHHHHhhHh
Q psy1119 850 VNLLTEA-NKL-GPVDGIFNLAVVL-------------KDALF---------------------ENQTPEDFNASLGPKA 893 (1392)
Q Consensus 850 ~~l~~~~-~~~-g~I~gvi~~Agv~-------------~d~~~---------------------~~~t~e~~~~~~~~kv 893 (1392)
+++++.+ +++ |+||++|||||+. ...++ ++++.++|+++++.+.
T Consensus 139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~ 218 (422)
T 3s8m_A 139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG 218 (422)
T ss_dssp HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence 9999998 679 9999999999872 22333 4789999999999999
Q ss_pred HHHH-HHHHHHh-hhC-CCCCeEEEecccccccCCCCC--hhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 894 NATK-YFDKYSR-TMC-PTLGQFVVFSSVSCGRGNAGQ--TNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 894 ~g~~-~L~~~~~-~~~-~~l~~fV~~SS~s~~~G~~gq--~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
.+.| .+.+++. +.+ ...+.+|++||+++..+.+++ ++|++||+++.+|++..+.+ |..+.+|..|.+.
T Consensus 219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~ 295 (422)
T 3s8m_A 219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVV 295 (422)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCc
Confidence 8887 6655543 222 234799999999999988865 99999999999999998877 5666777777664
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=4.2e-19 Score=200.56 Aligned_cols=171 Identities=20% Similarity=0.213 Sum_probs=142.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCH-HHHHHHHHHH-h
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTE-AGVVNLLTEA-N 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~-~~v~~l~~~~-~ 857 (1392)
.++++|||||+||||+++|++|+++|+++|++++|+... +..+ .+... ..+.++.++.||++|+ ++++++++++ +
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~-~~~~-~l~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP-TALA-ELKAI-NPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH-HHHH-HHHHH-CTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH-HHHH-HHHHh-CCCceEEEEEEecCCChHHHHHHHHHHHH
Confidence 478999999999999999999999999878888888532 1112 22221 1266889999999998 9999999988 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC-----CCeEEEecccccccCCCCChhHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT-----LGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~-----l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
+++++|+||||||+. +.++|++.+++|+.|++++.+++.+.+.+ .+.||++||+++..+.++++.|+
T Consensus 81 ~~g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 152 (254)
T 1sby_A 81 QLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYS 152 (254)
T ss_dssp HHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHH
T ss_pred hcCCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHH
Confidence 789999999999974 45789999999999999999988665432 46899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++|+++++|++..+.+ |+...+|..|.+.
T Consensus 153 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~ 185 (254)
T 1sby_A 153 ASKAAVVSFTNSLAKLAPITGVTAYSINPGITR 185 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEE
T ss_pred HHHHHHHHHHHHHHHHhccCCeEEEEEecCCcc
Confidence 9999999999987764 7778888887653
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.4e-19 Score=201.90 Aligned_cols=179 Identities=17% Similarity=0.154 Sum_probs=147.4
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+....... .+.++..|.++.++.||++|.++++++++.+ +
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 107 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGAD-VAIWYNSHPADEKA---EHLQKTYGVHSKAYKCNISDPKSVEETISQQEK 107 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCE-EEEEESSSCCHHHH---HHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHH---HHHHHhcCCcceEEEeecCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999997 88888886443322 2334444778899999999999999999998 6
Q ss_pred hcCCccEEEECcccCCC-cccc-CCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccC--CCCChhH
Q psy1119 858 KLGPVDGIFNLAVVLKD-ALFE-NQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRG--NAGQTNY 931 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d-~~~~-~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G--~~gq~~Y 931 (1392)
.++++|+||||||+... .++. +.+.++|++.+++|+.|++++.+.+.+.+. ..++||++||.++..+ .++++.|
T Consensus 108 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y 187 (279)
T 3ctm_A 108 DFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPY 187 (279)
T ss_dssp HHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHH
T ss_pred HhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccH
Confidence 78999999999998876 7777 899999999999999999988877655442 4589999999999988 8899999
Q ss_pred HHHHHHHHHHHHHHHHcCC---CeEEEEccccC
Q psy1119 932 GMANSIMERICEARRAEGL---PGLAVEWGAVG 961 (1392)
Q Consensus 932 aaana~ld~la~~r~~~Gl---p~~ai~~g~~~ 961 (1392)
+++|++++.|++..+.+.. ...+|..|.+.
T Consensus 188 ~~sK~a~~~~~~~la~e~~~~~~v~~v~Pg~v~ 220 (279)
T 3ctm_A 188 NTAKAACTHLAKSLAIEWAPFARVNTISPGYID 220 (279)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCEEEEEEECSBS
T ss_pred HHHHHHHHHHHHHHHHHhcccCCEEEEeccCCc
Confidence 9999999999998876522 56677776653
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.80 E-value=9.4e-19 Score=201.37 Aligned_cols=178 Identities=16% Similarity=0.120 Sum_probs=146.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCC-ceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYD-VQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G-~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
..++++|||||+||||+++|++|+++|++ |++++|+... .+...++++..| .++.++.||++|.++++++++++
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~~-V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 101 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGAH-VVVTARSKET---LQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAG 101 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHH---HHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999997 8888998432 223333444434 47889999999999999999998
Q ss_pred hhcCCccEEEEC-cccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHHH
Q psy1119 857 NKLGPVDGIFNL-AVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 857 ~~~g~I~gvi~~-Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+.+|++|+|||| ||+.. ..+.+.+.++|++.+++|+.|+.++.+++.+++. ..++||++||+++..+.++++.|+++
T Consensus 102 ~~~g~iD~li~naag~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 180 (286)
T 1xu9_A 102 KLMGGLDMLILNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSAS 180 (286)
T ss_dssp HHHTSCSEEEECCCCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred HHcCCCCEEEECCccCCC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCccHHHHH
Confidence 678999999999 56654 3556679999999999999999999988765432 34799999999999999999999999
Q ss_pred HHHHHHHHHHHHHc------CCCeEEEEccccC
Q psy1119 935 NSIMERICEARRAE------GLPGLAVEWGAVG 961 (1392)
Q Consensus 935 na~ld~la~~r~~~------Glp~~ai~~g~~~ 961 (1392)
|+++++|++..+.+ |+...++..|.+.
T Consensus 181 K~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~ 213 (286)
T 1xu9_A 181 KFALDGFFSSIRKEYSVSRVNVSITLCVLGLID 213 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEeecCccC
Confidence 99999999876654 5666777777653
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.2e-19 Score=226.31 Aligned_cols=175 Identities=23% Similarity=0.239 Sum_probs=144.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCc------ccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGV------KNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLL 853 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~------~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~ 853 (1392)
.++++|||||++|||+++|+.|+++||+ |++.+|+.. +.+..++..++++..|.++. +|++|.+++++++
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga~-Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~~~~~v 82 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGAK-VVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLDGDKIV 82 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEECC-----------CHHHHHHHHHHHTTCEEE---EECCCTTCHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCE-EEEEeCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHHHHHHH
Confidence 5799999999999999999999999998 777777531 11223344556666676654 5777777788899
Q ss_pred HHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChh
Q psy1119 854 TEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTN 930 (1392)
Q Consensus 854 ~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~ 930 (1392)
+++ +++|+||++|||||+..+.+|.+++.++|++++++|+.|++++.+++.+++. ..+.||++||+++..|++++++
T Consensus 83 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~ 162 (604)
T 2et6_A 83 ETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQAN 162 (604)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchH
Confidence 887 6799999999999999999999999999999999999999999998877653 3489999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCC----CeEEEEcc
Q psy1119 931 YGMANSIMERICEARRAEGL----PGLAVEWG 958 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~Gl----p~~ai~~g 958 (1392)
|+++|+++.+|++..+.+.. .+.+|..|
T Consensus 163 Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg 194 (604)
T 2et6_A 163 YASAKSALLGFAETLAKEGAKYNIKANAIAPL 194 (604)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence 99999999999999988743 34455544
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=4.9e-19 Score=201.36 Aligned_cols=181 Identities=15% Similarity=0.128 Sum_probs=150.7
Q ss_pred ccCCCCeEEEEcCcchHHHHHHHHHHHhCC--ceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHH
Q psy1119 777 YADSNKSYIICGGLGGFGLELADWLVLRGA--RKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLT 854 (1392)
Q Consensus 777 ~~~~~~~ylItGG~gGiG~~lA~~La~~GA--r~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~ 854 (1392)
...+++++|||||+||||+++|++|+++|+ .+|++++|+....... +++...+.++.++.||+++.++++++++
T Consensus 17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 92 (267)
T 1sny_A 17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL----EDLAKNHSNIHILEIDLRNFDAYDKLVA 92 (267)
T ss_dssp ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH----HHHHHHCTTEEEEECCTTCGGGHHHHHH
T ss_pred cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH----HHhhccCCceEEEEecCCChHHHHHHHH
Confidence 345678999999999999999999999993 3588899986544322 3333335678899999999999999999
Q ss_pred HH-hhcC--CccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--------C-----CCeEEEec
Q psy1119 855 EA-NKLG--PVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--------T-----LGQFVVFS 917 (1392)
Q Consensus 855 ~~-~~~g--~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--------~-----l~~fV~~S 917 (1392)
.+ +.++ ++|+||||||+.. ..++.+.+.++|++.+++|+.|++++.+++.+.+. . .+.||++|
T Consensus 93 ~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~is 172 (267)
T 1sny_A 93 DIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMS 172 (267)
T ss_dssp HHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEEC
T ss_pred HHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEe
Confidence 98 5677 8999999999987 78899999999999999999999999988865532 1 47899999
Q ss_pred ccccccCCC---CChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 918 SVSCGRGNA---GQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 918 S~s~~~G~~---gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|.++..+.+ ++..|+++|++++.|++..+.+ |+...+|..|.+.
T Consensus 173 S~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 223 (267)
T 1sny_A 173 SILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVK 223 (267)
T ss_dssp CGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred cccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCccee
Confidence 999988764 8899999999999999987765 8888888888763
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=8.7e-19 Score=196.79 Aligned_cols=175 Identities=17% Similarity=0.140 Sum_probs=148.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCC-ceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGA-RKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GA-r~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++++|||||+||||+++|++|+++|+ .+|++++|+....+. +..+ .+.++.++.||+++.++++++++++ +
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~----l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE----LKSI--KDSRVHVLPLTVTCDKSLDTFVSKVGE 75 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH----HHTC--CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHH----HHhc--cCCceEEEEeecCCHHHHHHHHHHHHH
Confidence 367999999999999999999999993 348889998544321 1222 3667899999999999999999988 6
Q ss_pred hcC--CccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--------C-----CCeEEEeccccc
Q psy1119 858 KLG--PVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--------T-----LGQFVVFSSVSC 921 (1392)
Q Consensus 858 ~~g--~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--------~-----l~~fV~~SS~s~ 921 (1392)
.+| ++|+||||||+.. ..++.+.+.++|+..+++|+.|++++.+++.+.+. . .+.||++||.++
T Consensus 76 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 155 (250)
T 1yo6_A 76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG 155 (250)
T ss_dssp HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred hcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence 688 9999999999987 78899999999999999999999999988765431 2 579999999999
Q ss_pred ccCC-------CCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 922 GRGN-------AGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 922 ~~G~-------~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
..+. +++..|+++|++++.|++..+.+ |+...+|..|.+
T Consensus 156 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 205 (250)
T 1yo6_A 156 SITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWV 205 (250)
T ss_dssp CSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC
T ss_pred ccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCce
Confidence 8887 78999999999999999987766 777888888766
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=9.4e-19 Score=196.75 Aligned_cols=169 Identities=18% Similarity=0.221 Sum_probs=142.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+... .+.+...+ ++.++.+|++|++++++++ +++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~-------~~~~~~~~-~~~~~~~D~~~~~~~~~~~---~~~ 72 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGAK-VIATDINESK-------LQELEKYP-GIQTRVLDVTKKKQIDQFA---NEV 72 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHHH-------HGGGGGST-TEEEEECCTTCHHHHHHHH---HHC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHH-------HHHHHhcc-CceEEEeeCCCHHHHHHHH---HHh
Confidence 5789999999999999999999999996 8888887311 11122111 5778899999999998443 457
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCC-CChhHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNA-GQTNYGMANS 936 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~-gq~~Yaaana 936 (1392)
+++|+||||||+....++.+++.++|++.+++|+.|++++.+++.+.+. ..+.||++||+++..+.+ +++.|+++|+
T Consensus 73 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~ 152 (246)
T 2ag5_A 73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKA 152 (246)
T ss_dssp SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHH
T ss_pred CCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHH
Confidence 8999999999998888999999999999999999999999998866442 458999999999999888 9999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++++|++..+.+ |++..+|..|.+
T Consensus 153 a~~~~~~~la~e~~~~gi~v~~v~Pg~v 180 (246)
T 2ag5_A 153 AVIGLTKSVAADFIQQGIRCNCVCPGTV 180 (246)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCE
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEeeCcC
Confidence 999999988765 777788887765
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=233.40 Aligned_cols=216 Identities=14% Similarity=0.053 Sum_probs=161.2
Q ss_pred CCCCeEEEEcCcch-HHHHHHHHHHHhCCceEEEec-CCCcccHH-HHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGG-FGLELADWLVLRGARKLVLTS-RSGVKNGY-QALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 779 ~~~~~ylItGG~gG-iG~~lA~~La~~GAr~lvl~s-Rs~~~~~~-~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
..++++|||||++| ||+++|++|+++|++ |++++ |+...... .++..+++...|.++.++.||++|.++++++++.
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~-VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~ 728 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAK-VIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY 728 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTTCE-EEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCE-EEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence 35799999999999 999999999999997 77774 54322111 2233345555688999999999999999999999
Q ss_pred H-hh---cC-CccEEEECcccCCCc-cccCCC--HHHHHHHHhhHhHHHHHHHHHH--hhhCC--CCCeEEEeccccccc
Q psy1119 856 A-NK---LG-PVDGIFNLAVVLKDA-LFENQT--PEDFNASLGPKANATKYFDKYS--RTMCP--TLGQFVVFSSVSCGR 923 (1392)
Q Consensus 856 ~-~~---~g-~I~gvi~~Agv~~d~-~~~~~t--~e~~~~~~~~kv~g~~~L~~~~--~~~~~--~l~~fV~~SS~s~~~ 923 (1392)
+ ++ +| +||+||||||+..++ ++.+++ .++|++++++|+.|++++.++. .+.+. ..+.||++||+++..
T Consensus 729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~ 808 (1878)
T 2uv9_A 729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF 808 (1878)
T ss_dssp HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence 8 56 88 999999999998887 899999 8999999999999999998763 33332 237999999999998
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHH
Q psy1119 924 GNAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFL 997 (1392)
Q Consensus 924 G~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l 997 (1392)
| ++++|+++|+++++|++.++++ ++.+.+|.+|.+.+++|..............+.....++++.+.+..++
T Consensus 809 g--g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~~~~~~~~~~~plr~~sPeEVA~avlfLa 884 (1878)
T 2uv9_A 809 G--NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSANNLVAEGVEKLGVRTFSQQEMAFNLLGLM 884 (1878)
T ss_dssp S--CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHHHHTHHHHHTTTCCCBCHHHHHHHHHHHH
T ss_pred C--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccchhhHHHHHhcCCCCCCHHHHHHHHHHHh
Confidence 8 6889999999999998876655 2556788888775456543311111111222322345566655554443
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.3e-19 Score=196.46 Aligned_cols=154 Identities=18% Similarity=0.146 Sum_probs=136.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+.. +|++|++++++++++ +
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~-----------------------~D~~~~~~v~~~~~~---~ 57 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHTI-VHVASRQTG-----------------------LDISDEKSVYHYFET---I 57 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTEE-EEEESGGGT-----------------------CCTTCHHHHHHHHHH---H
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEecCCcc-----------------------cCCCCHHHHHHHHHH---h
Confidence 5689999999999999999999999997 888888732 899999999998875 4
Q ss_pred CCccEEEECcccC-CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 860 GPVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 860 g~I~gvi~~Agv~-~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
++||++|||||+. ...++.+.+.++|++.+++|+.|++++.+++.+.+.+.+.||++||+++..+.++++.|+++|+++
T Consensus 58 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asK~a~ 137 (223)
T 3uce_A 58 GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKAAINAAI 137 (223)
T ss_dssp CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHHHHHHHH
Confidence 8999999999987 678899999999999999999999999999877765568999999999999999999999999999
Q ss_pred HHHHHHHHHcC--CCeEEEEcccc
Q psy1119 939 ERICEARRAEG--LPGLAVEWGAV 960 (1392)
Q Consensus 939 d~la~~r~~~G--lp~~ai~~g~~ 960 (1392)
++|++..+.+. ..+.+|..|.+
T Consensus 138 ~~~~~~la~e~~~i~vn~v~PG~v 161 (223)
T 3uce_A 138 EATTKVLAKELAPIRVNAISPGLT 161 (223)
T ss_dssp HHHHHHHHHHHTTSEEEEEEECSB
T ss_pred HHHHHHHHHhhcCcEEEEEEeCCC
Confidence 99999988874 34555655554
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=8.3e-19 Score=198.19 Aligned_cols=169 Identities=13% Similarity=0.054 Sum_probs=142.6
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g 860 (1392)
+++|||||+||||+++|+.|+++|++ |++++|+........ + ++..|.++..+ |.++++++++++ +++|
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~---~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g 71 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHT-VACHDESFKQKDELE---A-FAETYPQLKPM-----SEQEPAELIEAVTSAYG 71 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCE-EEECCGGGGSHHHHH---H-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHS
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHH---H-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhC
Confidence 58999999999999999999999997 888899854433222 2 33345555443 667788888887 6789
Q ss_pred CccEEEECcccC-CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 861 PVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 861 ~I~gvi~~Agv~-~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+||+||||||+. ...++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||.++..+.++++.|+++|++
T Consensus 72 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 151 (254)
T 1zmt_A 72 QVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAG 151 (254)
T ss_dssp CCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHH
Confidence 999999999998 778899999999999999999999999998866542 35899999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++|++..+.+ |+...+|..|.+
T Consensus 152 ~~~~~~~la~e~~~~gi~v~~v~PG~v 178 (254)
T 1zmt_A 152 ACTLANALSKELGEYNIPVFAIGPNYL 178 (254)
T ss_dssp HHHHHHHHHHHHGGGTCCEEEEEESSB
T ss_pred HHHHHHHHHHHhhhcCcEEEEEecCcc
Confidence 99999987766 888999998887
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.8e-18 Score=196.86 Aligned_cols=169 Identities=17% Similarity=0.138 Sum_probs=140.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcC--CceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSY--DVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~--G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
.++++|||||+||||+++|+.|+++|++ |++++|+.. ......++++.. +.++.++.||++|+++++++++.+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGAK-VALVDWNLE---AGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVV 81 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEEECCHH---HHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence 5789999999999999999999999997 888888742 222333444432 567889999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC-----CCeEEEecccccccCCCCChhH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT-----LGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~-----l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
+++|++|+||||||+.. .++|++.++.|+.|++++.+.+.+.+.+ .+.||++||+++..+.++++.|
T Consensus 82 ~~~g~id~lv~~Ag~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 153 (267)
T 2gdz_A 82 DHFGRLDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVY 153 (267)
T ss_dssp HHHSCCCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHH
T ss_pred HHcCCCCEEEECCCCCC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchH
Confidence 67999999999999752 4679999999999999998877655532 4789999999999999999999
Q ss_pred HHHHHHHHHHHHHH------HHcCCCeEEEEcccc
Q psy1119 932 GMANSIMERICEAR------RAEGLPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~r------~~~Glp~~ai~~g~~ 960 (1392)
+++|+++++|++.. ...|+...+|..|.+
T Consensus 154 ~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v 188 (267)
T 2gdz_A 154 CASKHGIVGFTRSAALAANLMNSGVRLNAICPGFV 188 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCB
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcC
Confidence 99999999999873 234777778887765
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.8e-19 Score=225.20 Aligned_cols=177 Identities=19% Similarity=0.211 Sum_probs=138.5
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCC------cccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSG------VKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNL 852 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~------~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l 852 (1392)
..++++|||||++|||+++|+.|+++|++ |++++|++ ......+...++++..|..+. +|+++.++++++
T Consensus 17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~-Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~D~~d~~~~~~~ 92 (613)
T 3oml_A 17 YDGRVAVVTGAGAGLGREYALLFAERGAK-VVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAV---ADYNSVIDGAKV 92 (613)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEC--------------CHHHHHHHHHHTTCCEE---ECCCCGGGHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEE---EEeCCHHHHHHH
Confidence 46899999999999999999999999997 77777721 112223445566666676543 799999999999
Q ss_pred HHHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCCh
Q psy1119 853 LTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQT 929 (1392)
Q Consensus 853 ~~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~ 929 (1392)
++++ +++|+||+||||||+..+..+.+++.++|+.++++|+.|++++.+++.+++. ..+.||++||+++..|.++++
T Consensus 93 ~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~ 172 (613)
T 3oml_A 93 IETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQV 172 (613)
T ss_dssp HC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCH
T ss_pred HHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCCh
Confidence 9988 6799999999999999999999999999999999999999999998866553 347999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHc----CCCeEEEEccc
Q psy1119 930 NYGMANSIMERICEARRAE----GLPGLAVEWGA 959 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~----Glp~~ai~~g~ 959 (1392)
+|+++|+++++|++..+.+ |..+.+|..|.
T Consensus 173 ~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~ 206 (613)
T 3oml_A 173 NYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTA 206 (613)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCC
Confidence 9999999999999998877 44556666654
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.78 E-value=8.7e-19 Score=196.78 Aligned_cols=168 Identities=11% Similarity=-0.011 Sum_probs=139.4
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEe-c--CCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLT-S--RSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~-s--Rs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
++++|||||+||||+++|+.|+++|++ |+++ + |+.. ..+...+++ .|++ +.|.++++++++++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~~~~r~~~---~~~~~~~~~--~~~~-------~~~~~~v~~~~~~~~ 67 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYT-VVCHDASFADAA---ERQRFESEN--PGTI-------ALAEQKPERLVDATL 67 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCE-EEECCGGGGSHH---HHHHHHHHS--TTEE-------ECCCCCGGGHHHHHG
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCcCCHH---HHHHHHHHh--CCCc-------ccCHHHHHHHHHHHH
Confidence 478999999999999999999999997 7777 6 8742 222223333 2433 33778888899887
Q ss_pred hhcCCccEEEECcccCCC---ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhH
Q psy1119 857 NKLGPVDGIFNLAVVLKD---ALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d---~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
+++|+||+||||||+... .++.+++.++|++++++|+.|++++.+++.+.+. ..+.||++||+++..+.++++.|
T Consensus 68 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y 147 (244)
T 1zmo_A 68 QHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLY 147 (244)
T ss_dssp GGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTH
T ss_pred HHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHH
Confidence 678999999999999888 8999999999999999999999999998866542 35899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 932 GMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 932 aaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 148 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 181 (244)
T 1zmo_A 148 GPARAATVALVESAAKTLSRDGILLYAIGPNFFN 181 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCc
Confidence 99999999999988766 6677788877653
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=2.9e-18 Score=191.79 Aligned_cols=165 Identities=21% Similarity=0.212 Sum_probs=141.7
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
++++|||||+||||+++|++|+++|++ |++++|+.. . .++.++.+|++|+++++++++++++++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~-V~~~~r~~~-~--------------~~~~~~~~D~~~~~~~~~~~~~~~~~~ 65 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYR-VVVLDLRRE-G--------------EDLIYVEGDVTREEDVRRAVARAQEEA 65 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEESSCC-S--------------SSSEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEccCcc-c--------------cceEEEeCCCCCHHHHHHHHHHHHhhC
Confidence 578999999999999999999999997 888888752 1 123678999999999999999886789
Q ss_pred CccEEEECcccCCCccccCCCH----HHHHHHHhhHhHHHHHHHHHHhhhCCCC--------CeEEEecccccccCCCCC
Q psy1119 861 PVDGIFNLAVVLKDALFENQTP----EDFNASLGPKANATKYFDKYSRTMCPTL--------GQFVVFSSVSCGRGNAGQ 928 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~----e~~~~~~~~kv~g~~~L~~~~~~~~~~l--------~~fV~~SS~s~~~G~~gq 928 (1392)
++|+||||||+.....+.+.+. ++|++.+++|+.|++++.+++.+.+.+. ++||++||.++..+.+++
T Consensus 66 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~ 145 (242)
T 1uay_A 66 PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ 145 (242)
T ss_dssp CEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTC
T ss_pred CceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCC
Confidence 9999999999987777776554 4999999999999999999886654332 299999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 929 TNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 929 ~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+.|+++|++++.|++..+.+ |++..+|..|.+.
T Consensus 146 ~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~ 182 (242)
T 1uay_A 146 AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFD 182 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCS
T ss_pred chhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCc
Confidence 99999999999999887765 7888888888764
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.78 E-value=2.2e-19 Score=210.78 Aligned_cols=177 Identities=10% Similarity=0.091 Sum_probs=143.9
Q ss_pred CCeEEEEcCcc--hHHHHHHHHHHHhCCceEEEecCCC---------cccHHHHHHHHHHhc---CCceEEEEeccCCCH
Q psy1119 781 NKSYIICGGLG--GFGLELADWLVLRGARKLVLTSRSG---------VKNGYQALRIKIWKS---YDVQVLISTDDITTE 846 (1392)
Q Consensus 781 ~~~ylItGG~g--GiG~~lA~~La~~GAr~lvl~sRs~---------~~~~~~~~~~~~l~~---~G~~v~~~~~Dv~~~ 846 (1392)
+|++|||||++ |||+++|++|+++|++ |++++|+. ...... .+.... ....+.++.||+++.
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~-Vv~~~~~~~~~l~~r~~~~~~~~---~~~~~~~~~~~~~~~~~~~Dv~~~ 77 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVK-IIFGIWPPVYNIFMKNYKNGKFD---NDMIIDKDKKMNILDMLPFDASFD 77 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCE-EEEEECHHHHHHHHHHHHTTTTT---GGGBCSSSCBCCEEEEEECCTTCS
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCE-EEEEecCccccccccchHHHHHH---HHHHHhhccccccccccccccccc
Confidence 68999999875 9999999999999997 77665542 100000 011111 123478889999988
Q ss_pred --H------------------HHHHHHHHH-hhcCCccEEEECcccC--CCccccCCCHHHHHHHHhhHhHHHHHHHHHH
Q psy1119 847 --A------------------GVVNLLTEA-NKLGPVDGIFNLAVVL--KDALFENQTPEDFNASLGPKANATKYFDKYS 903 (1392)
Q Consensus 847 --~------------------~v~~l~~~~-~~~g~I~gvi~~Agv~--~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~ 903 (1392)
+ +++++++++ +++|+||++|||||+. ...++.+++.++|++++++|+.|++++.+++
T Consensus 78 ~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 157 (329)
T 3lt0_A 78 TANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYF 157 (329)
T ss_dssp SGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred chhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 7 999999998 6799999999999974 4788999999999999999999999999998
Q ss_pred hhhCCCCCeEEEecccccccCCCCCh-hHHHHHHHHHHHHHHHHHc-----CCCeEEEEccccC
Q psy1119 904 RTMCPTLGQFVVFSSVSCGRGNAGQT-NYGMANSIMERICEARRAE-----GLPGLAVEWGAVG 961 (1392)
Q Consensus 904 ~~~~~~l~~fV~~SS~s~~~G~~gq~-~Yaaana~ld~la~~r~~~-----Glp~~ai~~g~~~ 961 (1392)
.+++.+.+.||++||+++..+.++++ .|+++|+++.+|++..+.+ |..+.+|..|.+.
T Consensus 158 ~p~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~ 221 (329)
T 3lt0_A 158 VNIMKPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK 221 (329)
T ss_dssp GGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred HHHHhhCCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceee
Confidence 87765558999999999999999996 9999999999999977654 6667777777653
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.6e-18 Score=197.56 Aligned_cols=177 Identities=16% Similarity=0.108 Sum_probs=144.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHH-hCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVL-RGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~-~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++++|||||+||||+++|++|++ +|++ |++++|+.. ......++++..|.++.++.+|++|.++++++++++ +
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~-V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 78 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGD-VVLTARDVT---RGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRK 78 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSE-EEEEESSHH---HHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCe-EEEEeCChH---HHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence 468999999999999999999999 8996 888888742 233445556666778889999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCC-HHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccC--C---------
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQT-PEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRG--N--------- 925 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t-~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G--~--------- 925 (1392)
++++||+||||||+..... ...+ .++|+..+++|+.|++++.+++.+.+.+.++||++||.++..+ .
T Consensus 79 ~~g~id~li~~Ag~~~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~ 157 (276)
T 1wma_A 79 EYGGLDVLVNNAGIAFKVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKF 157 (276)
T ss_dssp HHSSEEEEEECCCCCCCTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred hcCCCCEEEECCcccccCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhc
Confidence 7899999999999876544 3444 5899999999999999999998776544579999999887643 1
Q ss_pred ------------------------------CCChhHHHHHHHHHHHHHHHHH--------cCCCeEEEEccccC
Q psy1119 926 ------------------------------AGQTNYGMANSIMERICEARRA--------EGLPGLAVEWGAVG 961 (1392)
Q Consensus 926 ------------------------------~gq~~Yaaana~ld~la~~r~~--------~Glp~~ai~~g~~~ 961 (1392)
...+.|+++|++++.|++..+. .|+...+|..|.+.
T Consensus 158 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~ 231 (276)
T 1wma_A 158 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR 231 (276)
T ss_dssp HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBC
T ss_pred cccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccc
Confidence 1238999999999999987655 37888888888664
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.7e-18 Score=191.41 Aligned_cols=171 Identities=20% Similarity=0.154 Sum_probs=142.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
+++++|||||+||||+++|+.|+++|++ |++++|+.. ..+...+++ .+. .++.+|++|.++++++++ ++
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~-V~~~~r~~~---~~~~~~~~~--~~~--~~~~~D~~~~~~~~~~~~---~~ 74 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGAR-VVAVSRTQA---DLDSLVREC--PGI--EPVCVDLGDWEATERALG---SV 74 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHS--TTC--EEEECCTTCHHHHHHHHT---TC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHHc--CCC--CEEEEeCCCHHHHHHHHH---Hc
Confidence 5789999999999999999999999997 888888742 122222222 244 345899999999988876 57
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--C-CCeEEEecccccccCCCCChhHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--T-LGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~-l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+++|+||||||+....++.+.+.++|++.+++|+.|++++.+++.+.+. . .+.||++||.++..+.++++.|+++|+
T Consensus 75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 154 (244)
T 3d3w_A 75 GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKG 154 (244)
T ss_dssp CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHH
Confidence 8999999999998888899999999999999999999999988866542 2 579999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++.|++..+.+ |++..++..|.+.
T Consensus 155 a~~~~~~~la~e~~~~~i~v~~v~Pg~v~ 183 (244)
T 3d3w_A 155 ALDMLTKVMALELGPHKIRVNAVNPTVVM 183 (244)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBT
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEecccc
Confidence 999999987665 6777888877663
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=4.7e-18 Score=190.45 Aligned_cols=171 Identities=19% Similarity=0.146 Sum_probs=142.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
+++++|||||+||||+++|++|+++|++ |++++|+... .....+++ .+.+ ++.+|++|.++++++++ .+
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~-V~~~~r~~~~---~~~~~~~~--~~~~--~~~~D~~~~~~~~~~~~---~~ 74 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAK-VVAVTRTNSD---LVSLAKEC--PGIE--PVCVDLGDWDATEKALG---GI 74 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHS--TTCE--EEECCTTCHHHHHHHHT---TC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHhc--cCCC--cEEecCCCHHHHHHHHH---Hc
Confidence 5689999999999999999999999997 8888887421 22222221 2444 45899999999988876 67
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--C-CCeEEEecccccccCCCCChhHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--T-LGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~-l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+++|+||||||+....++.+.+.++|++.+++|+.|++++.+++.+.+. . .+.||++||.++..+.++++.|+++|+
T Consensus 75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 154 (244)
T 1cyd_A 75 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKG 154 (244)
T ss_dssp CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHH
Confidence 8999999999998888899999999999999999999999988766442 2 579999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++.|++..+.+ |.+..++..|.+.
T Consensus 155 a~~~~~~~~a~~~~~~gi~v~~v~pg~v~ 183 (244)
T 1cyd_A 155 AMTMLTKAMAMELGPHKIRVNSVNPTVVL 183 (244)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBT
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence 999999987665 6777788877653
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.4e-19 Score=228.13 Aligned_cols=216 Identities=17% Similarity=0.099 Sum_probs=156.3
Q ss_pred CCCeEEEEcCcch-HHHHHHHHHHHhCCceEEEe-cCCCcccHHHHHHH-HHHhcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 780 SNKSYIICGGLGG-FGLELADWLVLRGARKLVLT-SRSGVKNGYQALRI-KIWKSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 780 ~~~~ylItGG~gG-iG~~lA~~La~~GAr~lvl~-sRs~~~~~~~~~~~-~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
.++++|||||++| ||+++|++|+++|++ |+++ +|+..........+ +++...|.++.++.||++|.++++++++.+
T Consensus 475 ~GKvALVTGASgGGIGrAIAr~LA~~GA~-VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I 553 (1688)
T 2pff_A 475 KDKYVLITGAGKGSIGAEVLQGLLQGGAK-VVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI 553 (1688)
T ss_dssp CSCCEEECSCSSSSTHHHHHHHHHHHTCE-EEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHHCcCE-EEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence 5799999999998 999999999999998 5555 67654332221111 222334788999999999999999999998
Q ss_pred -hh-----cC-CccEEEECcccCCCc-cccCCC--HHHHHHHHhhHhHHHHHHHHHH--hhhCCC--CCeEEEecccccc
Q psy1119 857 -NK-----LG-PVDGIFNLAVVLKDA-LFENQT--PEDFNASLGPKANATKYFDKYS--RTMCPT--LGQFVVFSSVSCG 922 (1392)
Q Consensus 857 -~~-----~g-~I~gvi~~Agv~~d~-~~~~~t--~e~~~~~~~~kv~g~~~L~~~~--~~~~~~--l~~fV~~SS~s~~ 922 (1392)
++ +| +||+||||||+.... ++.+++ .++|++++++|+.|++++.+++ .+.+.+ .+.||++||+++.
T Consensus 554 ~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~ 633 (1688)
T 2pff_A 554 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT 633 (1688)
T ss_dssp HSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTT
T ss_pred HHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhc
Confidence 55 67 999999999998888 899999 9999999999999999999887 344432 2799999999998
Q ss_pred cCCCCChhHHHHHHHHHHH-HHHHHHcC---CCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHc
Q psy1119 923 RGNAGQTNYGMANSIMERI-CEARRAEG---LPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLI 998 (1392)
Q Consensus 923 ~G~~gq~~Yaaana~ld~l-a~~r~~~G---lp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~ 998 (1392)
.| +++.|+++|+++++| ++.++.+. +.+.+|.+|.+...+|..............+.....++++.+.+..+++
T Consensus 634 ~G--g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~~~~~l~~iplR~~sPEEVA~aIlFLaS 711 (1688)
T 2pff_A 634 FG--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRTFSQKEMAFNLLGLLT 711 (1688)
T ss_dssp SS--CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTTCSTTTSSSSCCCCCCCTTHHHHHHHTS
T ss_pred cC--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchHHHHHHHhCCCCCCCHHHHHHHHHHHhC
Confidence 88 889999999999999 55554433 3345666666653444332111000011111122355666666655543
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=4.1e-18 Score=191.88 Aligned_cols=169 Identities=18% Similarity=0.129 Sum_probs=139.3
Q ss_pred ccccCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHH
Q psy1119 775 RYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLT 854 (1392)
Q Consensus 775 ~~~~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~ 854 (1392)
+.....++++|||||+||||+++|+.|+++|++ |++++|+. ...+++ | .+.++ ||+ .++++++++
T Consensus 13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~-------~~~~~~---~-~~~~~-~D~--~~~~~~~~~ 77 (249)
T 1o5i_A 13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAE-VTICARNE-------ELLKRS---G-HRYVV-CDL--RKDLDLLFE 77 (249)
T ss_dssp ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCH-------HHHHHT---C-SEEEE-CCT--TTCHHHHHH
T ss_pred HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEcCCH-------HHHHhh---C-CeEEE-eeH--HHHHHHHHH
Confidence 344567899999999999999999999999997 88888873 112222 4 46667 999 556777776
Q ss_pred HHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHH
Q psy1119 855 EANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 855 ~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
.+. ++|+||||||+....++.+++.++|++.+++|+.|++++.+++.+.+. ..++||++||+++..+.++++.|+
T Consensus 78 ~~~---~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 154 (249)
T 1o5i_A 78 KVK---EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSN 154 (249)
T ss_dssp HSC---CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHH
T ss_pred Hhc---CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHH
Confidence 553 899999999998888999999999999999999999999887765442 347999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++|+++++|++..+.+ |+...+|..|.+.
T Consensus 155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 187 (249)
T 1o5i_A 155 SARMALTGFLKTLSFEVAPYGITVNCVAPGWTE 187 (249)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCc
Confidence 9999999999987765 6777888877664
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.4e-18 Score=197.18 Aligned_cols=168 Identities=18% Similarity=0.166 Sum_probs=140.1
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
..++++|||||+||||+++|+.|+++|++ |++++|+... .+ +..+..+.++.++.+|++|.++++++++++
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~-V~~~~r~~~~---~~---~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~-- 84 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGAT-VIMAVRDTRK---GE---AAARTMAGQVEVRELDLQDLSSVRRFADGV-- 84 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTCE-EEEEESCHHH---HH---HHHTTSSSEEEEEECCTTCHHHHHHHHHTC--
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEECCHHH---HH---HHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--
Confidence 46899999999999999999999999997 8888998421 22 222344778999999999999999988765
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC-------------
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN------------- 925 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~------------- 925 (1392)
++||+||||||+... ..+++.++|+.++++|+.|++++.+++.+.+. ..||++||.++..+.
T Consensus 85 -~~iD~lv~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~--~riv~isS~~~~~~~~~~~~~~~~~~~~ 159 (291)
T 3rd5_A 85 -SGADVLINNAGIMAV--PYALTVDGFESQIGTNHLGHFALTNLLLPRLT--DRVVTVSSMAHWPGRINLEDLNWRSRRY 159 (291)
T ss_dssp -CCEEEEEECCCCCSC--CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEE--EEEEEECCGGGTTCCCCSSCTTCSSSCC
T ss_pred -CCCCEEEECCcCCCC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--hheeEeechhhccCCCCcccccccccCC
Confidence 799999999998753 46788999999999999999999999877653 489999999988763
Q ss_pred CCChhHHHHHHHHHHHHHHHHHc----C--CCeEEEEcccc
Q psy1119 926 AGQTNYGMANSIMERICEARRAE----G--LPGLAVEWGAV 960 (1392)
Q Consensus 926 ~gq~~Yaaana~ld~la~~r~~~----G--lp~~ai~~g~~ 960 (1392)
++.+.|+++|++++.|++..+.+ | ..+.+|..|.+
T Consensus 160 ~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v 200 (291)
T 3rd5_A 160 SPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYS 200 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGG
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCC
Confidence 56789999999999999887665 5 66777777776
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.5e-18 Score=184.24 Aligned_cols=165 Identities=22% Similarity=0.202 Sum_probs=138.2
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
+++|||||+||||+++|++|+++ +|++++|+... .....+++. . .++.||++|++++++++++ +++
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r~~~~---~~~~~~~~~---~--~~~~~D~~~~~~~~~~~~~---~~~ 66 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH---DLLLSGRRAGA---LAELAREVG---A--RALPADLADELEAKALLEE---AGP 66 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS---EEEEECSCHHH---HHHHHHHHT---C--EECCCCTTSHHHHHHHHHH---HCS
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC---CEEEEECCHHH---HHHHHHhcc---C--cEEEeeCCCHHHHHHHHHh---cCC
Confidence 47999999999999999999988 69999997422 222233332 1 7788999999999999887 789
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHHH
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERI 941 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~l 941 (1392)
+|+||||||+....++.+.+.++|++.+++|+.|++++.+++.. ...++||++||.++..+.++.+.|+++|++++.|
T Consensus 67 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 144 (207)
T 2yut_A 67 LDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARF--QKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAY 144 (207)
T ss_dssp EEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCE--EEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHH
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHh--cCCcEEEEEcChhhccCCCCcchHHHHHHHHHHH
Confidence 99999999998888999999999999999999999999988732 2457999999999999999999999999999999
Q ss_pred HHHHHHc----CCCeEEEEccccCc
Q psy1119 942 CEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 942 a~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
++..+.+ |++..++.+|.+..
T Consensus 145 ~~~~~~~~~~~gi~v~~v~pg~v~t 169 (207)
T 2yut_A 145 LEAARKELLREGVHLVLVRLPAVAT 169 (207)
T ss_dssp HHHHHHHHHTTTCEEEEECCCCBCS
T ss_pred HHHHHHHHhhhCCEEEEEecCcccC
Confidence 9987765 88899999887743
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-18 Score=194.23 Aligned_cols=210 Identities=16% Similarity=0.162 Sum_probs=133.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.++++|||||+||||+++|+.|++ |++ |++++|+... . +.+.. ...+..+.+|+++.+..+.+.+..+++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~~-v~~~~r~~~~---~----~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 73 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DHI-VYALGRNPEH---L----AALAE-IEGVEPIESDIVKEVLEEGGVDKLKNL 73 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TSE-EEEEESCHHH---H----HHHHT-STTEEEEECCHHHHHHTSSSCGGGTTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CCe-EEEEeCCHHH---H----HHHHh-hcCCcceecccchHHHHHHHHHHHHhc
Confidence 478999999999999999999987 886 8888887321 1 11222 234778899999987744333444678
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
++||+||||||+.....+.+.+.++|++.+++|+.|++++.+++.+.+. ..+.||++||.++..+.++++.|+++|+++
T Consensus 74 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 153 (245)
T 3e9n_A 74 DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKHAL 153 (245)
T ss_dssp SCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------CHHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCCchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998865442 248999999999999999999999999999
Q ss_pred HHHHHHHHHc----CCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccCC
Q psy1119 939 ERICEARRAE----GLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSE 1001 (1392)
Q Consensus 939 d~la~~r~~~----Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~ 1001 (1392)
++|++..+.+ |....+|..|.+..- +.......... .........++++.+.+..++..+.
T Consensus 154 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~-~~~~~~~~~p~dvA~~i~~l~~~~~ 218 (245)
T 3e9n_A 154 RGLADAFRKEEANNGIRVSTVSPGPTNTP-MLQGLMDSQGT-NFRPEIYIEPKEIANAIRFVIDAGE 218 (245)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCC------------------CCGGGSCHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHhhhcCeEEEEEecCCccCc-hhhhhhhhhhc-ccccccCCCHHHHHHHHHHHHcCCC
Confidence 9999988764 778888888876432 22211111000 0111123456677777766666543
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.3e-18 Score=183.29 Aligned_cols=154 Identities=17% Similarity=0.190 Sum_probs=136.9
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
++|||||+||||+++|++|+ +|++ |++++|+.. .+.+|++++++++++++.. +++
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~~-V~~~~r~~~--------------------~~~~D~~~~~~~~~~~~~~---~~~ 59 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKAE-VITAGRHSG--------------------DVTVDITNIDSIKKMYEQV---GKV 59 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTSE-EEEEESSSS--------------------SEECCTTCHHHHHHHHHHH---CCE
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCCe-EEEEecCcc--------------------ceeeecCCHHHHHHHHHHh---CCC
Confidence 69999999999999999999 9997 888888742 3689999999999988764 899
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHHHH
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERIC 942 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~la 942 (1392)
|+||||||+....++.+.+.++|++.++.|+.|++++.+++.+.+.+.++||++||.++..+.++++.|+++|++++.++
T Consensus 60 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~ 139 (202)
T 3d7l_A 60 DAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFA 139 (202)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCCccHHHHHHHHHHHHHH
Confidence 99999999988888999999999999999999999999988765443479999999999999999999999999999999
Q ss_pred HHHHHc---CCCeEEEEccccC
Q psy1119 943 EARRAE---GLPGLAVEWGAVG 961 (1392)
Q Consensus 943 ~~r~~~---Glp~~ai~~g~~~ 961 (1392)
+..+.+ |++..++..|.+.
T Consensus 140 ~~~~~e~~~gi~v~~v~pg~v~ 161 (202)
T 3d7l_A 140 KSAAIEMPRGIRINTVSPNVLE 161 (202)
T ss_dssp HHHTTSCSTTCEEEEEEECCBG
T ss_pred HHHHHHccCCeEEEEEecCccC
Confidence 998865 6777888877653
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-17 Score=223.10 Aligned_cols=185 Identities=18% Similarity=0.130 Sum_probs=146.9
Q ss_pred CCCCeEEEEcCcch-HHHHHHHHHHHhCCceEEEe-cCCCcccHHH-HHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGG-FGLELADWLVLRGARKLVLT-SRSGVKNGYQ-ALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 779 ~~~~~ylItGG~gG-iG~~lA~~La~~GAr~lvl~-sRs~~~~~~~-~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
..++++|||||++| ||+++|++|+++|++ |+++ +|+....... ++..+++...|.++.++.||++|.++++++++.
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~-Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~ 751 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAK-VVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF 751 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTCE-EEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCE-EEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence 35799999999998 999999999999997 6666 6664322222 222233445588999999999999999999999
Q ss_pred H-hh-----cC-CccEEEECcccCCCc-cccCCC--HHHHHHHHhhHhHHHHHHHHHH--hhhCCC--CCeEEEeccccc
Q psy1119 856 A-NK-----LG-PVDGIFNLAVVLKDA-LFENQT--PEDFNASLGPKANATKYFDKYS--RTMCPT--LGQFVVFSSVSC 921 (1392)
Q Consensus 856 ~-~~-----~g-~I~gvi~~Agv~~d~-~~~~~t--~e~~~~~~~~kv~g~~~L~~~~--~~~~~~--l~~fV~~SS~s~ 921 (1392)
+ ++ +| +||+||||||+.... ++.+++ .++|++++++|+.|++++.+++ .+.+.. .+.||++||+++
T Consensus 752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag 831 (1887)
T 2uv8_A 752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG 831 (1887)
T ss_dssp HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTT
T ss_pred HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHh
Confidence 8 55 66 999999999998888 899999 9999999999999999999877 333322 379999999999
Q ss_pred ccCCCCChhHHHHHHHHHHH-HHHHHHcC---CCeEEEEccccCccccc
Q psy1119 922 GRGNAGQTNYGMANSIMERI-CEARRAEG---LPGLAVEWGAVGEVGLV 966 (1392)
Q Consensus 922 ~~G~~gq~~Yaaana~ld~l-a~~r~~~G---lp~~ai~~g~~~~~G~~ 966 (1392)
..| +++.|+++|+++++| ++.++.+. +.+.+|.+|.+..++|.
T Consensus 832 ~~g--g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~ 878 (1887)
T 2uv8_A 832 TFG--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLM 878 (1887)
T ss_dssp CSS--CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC---
T ss_pred ccC--CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccccccc
Confidence 988 889999999999999 77766653 34567777766534554
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.2e-18 Score=199.12 Aligned_cols=181 Identities=11% Similarity=0.130 Sum_probs=120.0
Q ss_pred CCCeEEEEcC--cchHHHHHHHHHHHhCCceEEEecCCC-----------cccHHH--------HHHHHHHhcCCc----
Q psy1119 780 SNKSYIICGG--LGGFGLELADWLVLRGARKLVLTSRSG-----------VKNGYQ--------ALRIKIWKSYDV---- 834 (1392)
Q Consensus 780 ~~~~ylItGG--~gGiG~~lA~~La~~GAr~lvl~sRs~-----------~~~~~~--------~~~~~~l~~~G~---- 834 (1392)
.++++||||| ++|||+++|+.|+++|++ |++++|+. ...... .+..++++..|.
T Consensus 8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (319)
T 2ptg_A 8 RGKTAFVAGVADSNGYGWAICKLLRAAGAR-VLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVF 86 (319)
T ss_dssp TTCEEEEECCCCTTSHHHHHHHHHHHTTCE-EEEEECHHHHHHHHC--------------------------------CC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCE-EEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccc
Confidence 5789999999 899999999999999997 77777642 000000 012233333332
Q ss_pred -eEEEEe----------ccCCC--------HHHHHHHHHHH-hhcCCccEEEECcccCC--CccccCCCHHHHHHHHhhH
Q psy1119 835 -QVLIST----------DDITT--------EAGVVNLLTEA-NKLGPVDGIFNLAVVLK--DALFENQTPEDFNASLGPK 892 (1392)
Q Consensus 835 -~v~~~~----------~Dv~~--------~~~v~~l~~~~-~~~g~I~gvi~~Agv~~--d~~~~~~t~e~~~~~~~~k 892 (1392)
.+.... ||+++ .++++++++++ +++|+||++|||||+.. ..++.+++.++|++++++|
T Consensus 87 ~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN 166 (319)
T 2ptg_A 87 DKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSS 166 (319)
T ss_dssp SEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHH
T ss_pred cccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHh
Confidence 333322 33333 45889999988 67899999999999863 6789999999999999999
Q ss_pred hHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCC-hhHHHHHHHHHHHHHHHHHc-----CCCeEEEEccccC
Q psy1119 893 ANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQ-TNYGMANSIMERICEARRAE-----GLPGLAVEWGAVG 961 (1392)
Q Consensus 893 v~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq-~~Yaaana~ld~la~~r~~~-----Glp~~ai~~g~~~ 961 (1392)
+.|++++.+++.+++.+.+.||++||+++..+.+++ +.|+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 167 ~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~ 241 (319)
T 2ptg_A 167 SYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLK 241 (319)
T ss_dssp THHHHHHHHHHGGGEEEEEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred hHHHHHHHHHHHHHHhcCceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCcc
Confidence 999999999987766445899999999999999998 79999999999999977644 6777788877663
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-17 Score=199.07 Aligned_cols=182 Identities=12% Similarity=0.064 Sum_probs=144.3
Q ss_pred CCCCeEEEEcCcchHHHH--HHHHHHHhCCceEEEecCCCcccHH---------HHHHHHHHhcCCceEEEEeccCCCHH
Q psy1119 779 DSNKSYIICGGLGGFGLE--LADWLVLRGARKLVLTSRSGVKNGY---------QALRIKIWKSYDVQVLISTDDITTEA 847 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~--lA~~La~~GAr~lvl~sRs~~~~~~---------~~~~~~~l~~~G~~v~~~~~Dv~~~~ 847 (1392)
..+|++|||||++|||++ +|+.|+++||+ |++++|+...... .+...+..+..|.++..+.||+++.+
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~ 136 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAH-TIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNE 136 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCE-EEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCE-EEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHH
Confidence 467999999999999999 99999999997 7778886543210 12333445667889999999999999
Q ss_pred HHHHHHHHH-hhcCCccEEEECcccC-------------CCccc---------------------cCCCHHHHHHHHhhH
Q psy1119 848 GVVNLLTEA-NKLGPVDGIFNLAVVL-------------KDALF---------------------ENQTPEDFNASLGPK 892 (1392)
Q Consensus 848 ~v~~l~~~~-~~~g~I~gvi~~Agv~-------------~d~~~---------------------~~~t~e~~~~~~~~k 892 (1392)
+++++++++ +++|+||++|||||+. ...++ ++++.++|+.+++.+
T Consensus 137 ~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn 216 (418)
T 4eue_A 137 TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM 216 (418)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence 999999998 6799999999999974 22233 578999999999999
Q ss_pred hHHHH-HHHHHHh-hhC-CCCCeEEEecccccccCCCCC--hhHHHHHHHHHHHHHHHHHc-----CCCeEEEEccccC
Q psy1119 893 ANATK-YFDKYSR-TMC-PTLGQFVVFSSVSCGRGNAGQ--TNYGMANSIMERICEARRAE-----GLPGLAVEWGAVG 961 (1392)
Q Consensus 893 v~g~~-~L~~~~~-~~~-~~l~~fV~~SS~s~~~G~~gq--~~Yaaana~ld~la~~r~~~-----Glp~~ai~~g~~~ 961 (1392)
..+.| .+.+++. ..+ ...+.+|++||+++..+.+++ +.|++||+++++|++..+.+ |..+.+|..|.+.
T Consensus 217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~ 295 (418)
T 4eue_A 217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALV 295 (418)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCc
Confidence 98888 5555442 222 234789999999999999988 99999999999999988766 4446666666653
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-18 Score=199.61 Aligned_cols=180 Identities=12% Similarity=0.119 Sum_probs=138.9
Q ss_pred CCCeEEEEcCc--chHHHHHHHHHHHhCCceEEEecCCCcccHHH----HHH---HHHHhcCCc---eEEEEecc-----
Q psy1119 780 SNKSYIICGGL--GGFGLELADWLVLRGARKLVLTSRSGVKNGYQ----ALR---IKIWKSYDV---QVLISTDD----- 842 (1392)
Q Consensus 780 ~~~~ylItGG~--gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~----~~~---~~~l~~~G~---~v~~~~~D----- 842 (1392)
.++++|||||+ +|||+++|+.|+++|++ |++++|+....... ... .+++.. |. ....+.+|
T Consensus 7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 84 (297)
T 1d7o_A 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAE-ILVGTWVPALNIFETSLRRGKFDQSRVLPD-GSLMEIKKVYPLDAVFDN 84 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTCE-EEEEEEHHHHHHHHHHHHTTTTTGGGBCTT-SSBCCEEEEEEECTTCCS
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCe-EEEeeccccchhhhhhhhhhHhhhhhhhcc-ccccccccccccceeccc
Confidence 57899999999 99999999999999997 77777652110000 000 111111 21 12233332
Q ss_pred ---C----CC--------HHHHHHHHHHH-hhcCCccEEEECcccCC--CccccCCCHHHHHHHHhhHhHHHHHHHHHHh
Q psy1119 843 ---I----TT--------EAGVVNLLTEA-NKLGPVDGIFNLAVVLK--DALFENQTPEDFNASLGPKANATKYFDKYSR 904 (1392)
Q Consensus 843 ---v----~~--------~~~v~~l~~~~-~~~g~I~gvi~~Agv~~--d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~ 904 (1392)
+ +| +++++++++++ +++|+||++|||||+.. ..++.+++.++|++++++|+.|++++.+++.
T Consensus 85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 164 (297)
T 1d7o_A 85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL 164 (297)
T ss_dssp GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3 22 66899999988 67899999999999754 6788999999999999999999999999987
Q ss_pred hhCCCCCeEEEecccccccCCCCC-hhHHHHHHHHHHHHHHHHH-----cCCCeEEEEccccC
Q psy1119 905 TMCPTLGQFVVFSSVSCGRGNAGQ-TNYGMANSIMERICEARRA-----EGLPGLAVEWGAVG 961 (1392)
Q Consensus 905 ~~~~~l~~fV~~SS~s~~~G~~gq-~~Yaaana~ld~la~~r~~-----~Glp~~ai~~g~~~ 961 (1392)
+++.+.+.||++||+++..+.+++ +.|+++|+++++|++..+. .|..+.+|..|.+.
T Consensus 165 ~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~ 227 (297)
T 1d7o_A 165 PIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLG 227 (297)
T ss_dssp GGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCB
T ss_pred HHhccCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccc
Confidence 766445899999999999999998 7999999999999998764 37888888888764
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=5.8e-18 Score=197.55 Aligned_cols=180 Identities=17% Similarity=0.148 Sum_probs=138.5
Q ss_pred CCCeEEEEcC--cchHHHHHHHHHHHhCCceEEEecCCCccc----HHHH---HHHHHHhcCCc-----eEEE-------
Q psy1119 780 SNKSYIICGG--LGGFGLELADWLVLRGARKLVLTSRSGVKN----GYQA---LRIKIWKSYDV-----QVLI------- 838 (1392)
Q Consensus 780 ~~~~ylItGG--~gGiG~~lA~~La~~GAr~lvl~sRs~~~~----~~~~---~~~~~l~~~G~-----~v~~------- 838 (1392)
.++++||||| ++|||+++|+.|+++|++ |++++|+.... .... ...+++.. |. .+..
T Consensus 8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~ 85 (315)
T 2o2s_A 8 RGQTAFVAGVADSHGYGWAIAKHLASAGAR-VALGTWPPVLGLFQKSLQSGRLDEDRKLPD-GSLIEFAGVYPLDAAFDK 85 (315)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHTTTCE-EEEEECHHHHHHHHHHHHHTTTHHHHBCTT-SCBCCCSCEEECCTTCSS
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHHHCCCE-EEEEecccccchhhhhhhhhhhhhhhhhhc-cccccccccccccccccc
Confidence 5799999999 899999999999999997 77787752100 0000 01122211 21 2322
Q ss_pred ---EeccCCC--------HHHHHHHHHHH-hhcCCccEEEECcccCC--CccccCCCHHHHHHHHhhHhHHHHHHHHHHh
Q psy1119 839 ---STDDITT--------EAGVVNLLTEA-NKLGPVDGIFNLAVVLK--DALFENQTPEDFNASLGPKANATKYFDKYSR 904 (1392)
Q Consensus 839 ---~~~Dv~~--------~~~v~~l~~~~-~~~g~I~gvi~~Agv~~--d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~ 904 (1392)
+.||++| +++++++++++ +++|+||++|||||+.. ..++.+++.++|++++++|+.|++++.+++.
T Consensus 86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 165 (315)
T 2o2s_A 86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFG 165 (315)
T ss_dssp TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHS
T ss_pred cchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 2234443 66899999988 67999999999999863 6788999999999999999999999999987
Q ss_pred hhCCCCCeEEEecccccccCCCCC-hhHHHHHHHHHHHHHHHHHc-----CCCeEEEEccccC
Q psy1119 905 TMCPTLGQFVVFSSVSCGRGNAGQ-TNYGMANSIMERICEARRAE-----GLPGLAVEWGAVG 961 (1392)
Q Consensus 905 ~~~~~l~~fV~~SS~s~~~G~~gq-~~Yaaana~ld~la~~r~~~-----Glp~~ai~~g~~~ 961 (1392)
+++.+.+.||++||+++..+.+++ +.|+++|+++++|++..+.+ |..+.+|..|.+.
T Consensus 166 ~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~ 228 (315)
T 2o2s_A 166 PIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLK 228 (315)
T ss_dssp TTEEEEEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCC
T ss_pred HHHhcCCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEeccccc
Confidence 765445899999999999999998 69999999999999977644 6677778777653
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.73 E-value=8e-17 Score=178.19 Aligned_cols=208 Identities=15% Similarity=0.143 Sum_probs=141.3
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecCCCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHHHHHH
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELA 1236 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA~EmA 1236 (1392)
++||||+|+++|+...|.+|++.|.. +.++.++. ...++++++|.+.++.. ++.+||+|+||||||.||+|+|
T Consensus 17 ~~~l~~~hg~~~~~~~~~~~~~~l~~-~~v~~~d~----~g~~~~~~~~~~~i~~~--~~~~~~~l~G~S~Gg~ia~~~a 89 (230)
T 1jmk_C 17 EQIIFAFPPVLGYGLMYQNLSSRLPS-YKLCAFDF----IEEEDRLDRYADLIQKL--QPEGPLTLFGYSAGCSLAFEAA 89 (230)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHCTT-EEEEEECC----CCSTTHHHHHHHHHHHH--CCSSCEEEEEETHHHHHHHHHH
T ss_pred CCCEEEECCCCCchHHHHHHHHhcCC-CeEEEecC----CCHHHHHHHHHHHHHHh--CCCCCeEEEEECHhHHHHHHHH
Confidence 47999999999999999999999988 88998862 23566888898888754 3678999999999999999999
Q ss_pred HHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccc-cCCHHHHHHHHHHHHHHHHhhccccC--CCC
Q psy1119 1237 IKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDA-THSRTYQRNLAHAAYKRITSILKYTD--PKH 1312 (1392)
Q Consensus 1237 ~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~y~~--~~~ 1312 (1392)
+++++.|..+ .++++|+.++.....+.... ..+.+..++...+... ...+.... .+....++...|.. ...
T Consensus 90 ~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 164 (230)
T 1jmk_C 90 KKLEGQGRIVQRIIMVDSYKKQGVSDLDGRT-VESDVEALMNVNRDNEALNSEAVKH----GLKQKTHAFYSYYVNLIST 164 (230)
T ss_dssp HHHHHTTCCEEEEEEESCCEECCCC---------CCHHHHHHHTTTCSGGGSHHHHH----HHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHcCCCccEEEEECCCCCCccccccccc-HHHHHHHHHhcChhhhhhhhHHHHH----HHHHHHHHHHHHhhhcccc
Confidence 9999999888 78899986543211111100 0111112211111100 01111111 11111222333321 223
Q ss_pred CcccceEEEEeeCCCCCCChhhcCcccccCCCeEEEEEccCccccccChHHHHHHHhhhcccCC
Q psy1119 1313 KAFGGNITLLRPTEQALPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDSTDFK 1376 (1392)
Q Consensus 1313 ~~~~~pi~l~~a~~~~~~~~~~~~W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~~~L~~ 1376 (1392)
.++++|++++++++|.........|.+++.+.++++.++|+|++|+..++...++..+...|..
T Consensus 165 ~~~~~P~l~i~g~~D~~~~~~~~~w~~~~~~~~~~~~i~g~H~~~~~~~~~~~~~~~i~~~l~~ 228 (230)
T 1jmk_C 165 GQVKADIDLLTSGADFDIPEWLASWEEATTGAYRMKRGFGTHAEMLQGETLDRNAGILLEFLNT 228 (230)
T ss_dssp SCBSSEEEEEECSSCCCCCTTEECSGGGBSSCEEEEECSSCGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred ccccccEEEEEeCCCCCCccccchHHHhcCCCeEEEEecCChHHHcCcHhHHHHHHHHHHHHhh
Confidence 4799999999999887323456789999888899999999998888888777788777776654
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=6.7e-17 Score=184.24 Aligned_cols=216 Identities=15% Similarity=0.181 Sum_probs=159.3
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCceEEEecC--------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD--------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~--------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
.++||+|+|+.+|+...|.+|++.|...+.++.++ ..+...+++++|+.+.+.|+.. ++.+|++|+||||
T Consensus 50 ~~~~lvllHG~~~~~~~~~~l~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~~--~~~~~~~lvG~S~ 127 (280)
T 3qmv_A 50 APLRLVCFPYAGGTVSAFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTMEPLAEAVADALEEH--RLTHDYALFGHSM 127 (280)
T ss_dssp CSEEEEEECCTTCCGGGGTTHHHHHCTTEEEEECCCTTSGGGTTSCCCCSHHHHHHHHHHHHHHT--TCSSSEEEEEETH
T ss_pred CCceEEEECCCCCChHHHHHHHHhcCCCceEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--CCCCCEEEEEeCH
Confidence 34789999999999999999999999889999986 2344579999999999999854 3678999999999
Q ss_pred hHHHHHHHHHHHHHcCCc-c-EEEEEeCCCCCCcccc-CCCCChHHHHHHHHh--cCCccccCCHHHHHHHHHHHHHHHH
Q psy1119 1228 GGMVALELAIKLEQLGTK-C-HLYLVDSAPDYVLTSL-RKLPDWNAKLNYFLD--LMPEDATHSRTYQRNLAHAAYKRIT 1302 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~-v-~LvLiD~~p~~~~~~l-~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~ 1302 (1392)
||.+|+++|.++.+++.. + .++++++.++...... ......+.....+.. ..+.....++++...+.+.++.++.
T Consensus 128 Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (280)
T 3qmv_A 128 GALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLR 207 (280)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC---------CCTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhhcCHHHHHHHHHHHHHHHH
Confidence 999999999999998873 3 6777777654421111 111122333333322 2233333344555666778888888
Q ss_pred hhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEccCccccccChHHHHHHHhhhcc
Q psy1119 1303 SILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDST 1373 (1392)
Q Consensus 1303 ~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~~~ 1373 (1392)
....|.+....++++|++++.+++|. ........|.+...+...++.++|+|+.++++++...++..|.+.
T Consensus 208 ~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~~~~~~~~~~i~~~ 279 (280)
T 3qmv_A 208 ACERYDWHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTGSFLRRHLPGNHFFLNGGPSRDRLLAHLGTE 279 (280)
T ss_dssp HHHTCCCCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBSSCEEEEEEEEETTGGGSSHHHHHHHHHHHTT
T ss_pred HHHhccccCCCceecCeEEEEecCCCCcChHHHHHHHHhcCCceEEEEecCCCeEEcCchhHHHHHHHHHhh
Confidence 99999876556899999999999887 555667789999888899999999999999777666677666554
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=7.5e-17 Score=180.88 Aligned_cols=209 Identities=15% Similarity=0.159 Sum_probs=140.0
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCceEEEecCCCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHHHHH
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALEL 1235 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA~Em 1235 (1392)
.++||||+|+++|+...|.+|++.|...+.++.++. ...+++++.|++.|+.. ++.+||+|+||||||.||+|+
T Consensus 21 ~~~~l~~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~----~g~~~~~~~~~~~i~~~--~~~~~~~l~GhS~Gg~va~~~ 94 (244)
T 2cb9_A 21 GGKNLFCFPPISGFGIYFKDLALQLNHKAAVYGFHF----IEEDSRIEQYVSRITEI--QPEGPYVLLGYSAGGNLAFEV 94 (244)
T ss_dssp CSSEEEEECCTTCCGGGGHHHHHHTTTTSEEEEECC----CCSTTHHHHHHHHHHHH--CSSSCEEEEEETHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHhCCCceEEEEcC----CCHHHHHHHHHHHHHHh--CCCCCEEEEEECHhHHHHHHH
Confidence 357999999999999999999999998888888862 12467899999998754 367899999999999999999
Q ss_pred HHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHHHHHHHhhccccC--CCC
Q psy1119 1236 AIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTD--PKH 1312 (1392)
Q Consensus 1236 A~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~y~~--~~~ 1312 (1392)
|+++++.|..+ .++++|+.++.. ....... ++.+ ...+ .+.....+...+ ++...|.. ...
T Consensus 95 a~~~~~~~~~v~~lvl~~~~~~~~--~~~~~~~-~~~~---~~~~------~~~~~~~~~~~~----~~~~~~~~~~~~~ 158 (244)
T 2cb9_A 95 VQAMEQKGLEVSDFIIVDAYKKDQ--SITADTE-NDDS---AAYL------PEAVRETVMQKK----RCYQEYWAQLINE 158 (244)
T ss_dssp HHHHHHTTCCEEEEEEESCCCCCS--CCCCC-----------CCS------CHHHHHHHTHHH----HHHHHHHHHCCCC
T ss_pred HHHHHHcCCCccEEEEEcCCCCcc--ccccccc-HHHH---HHHh------HHHHHHHHHHHH----HHHHHHHHhhccC
Confidence 99999998888 788999876521 1111111 1111 1111 111111111111 11122211 122
Q ss_pred CcccceEEEEeeC--CCCCCChhhcCcccccCCCeEEEEEccCccccccChHHHHHHHhhhcccCCCCcccccCCCCC
Q psy1119 1313 KAFGGNITLLRPT--EQALPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDSTDFKTALFTSDDTGLN 1388 (1392)
Q Consensus 1313 ~~~~~pi~l~~a~--~~~~~~~~~~~W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~~~L~~~~~~~~~~~~~~ 1388 (1392)
.++++|+++++++ +|.........|.+++.+.++++.++|+|++|+..++...++..+...|... ...+.+|-|
T Consensus 159 ~~i~~Pvl~i~g~~~~D~~~~~~~~~w~~~~~~~~~~~~i~ggH~~~~~~~~~~~~~~~i~~~L~~~--~~~~~~~~~ 234 (244)
T 2cb9_A 159 GRIKSNIHFIEAGIQTETSGAMVLQKWQDAAEEGYAEYTGYGAHKDMLEGEFAEKNANIILNILDKI--NSDQKVLPN 234 (244)
T ss_dssp SCBSSEEEEEECSBCSCCCHHHHTTSSGGGBSSCEEEEECSSBGGGTTSHHHHHHHHHHHHHHHHTC-----------
T ss_pred CCcCCCEEEEEccCccccccccchhHHHHhcCCCCEEEEecCChHHHcChHHHHHHHHHHHHHHhcC--ccCCeeCCC
Confidence 4799999999998 5543234457899999888999999999998888777777777777777653 334456655
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.8e-17 Score=192.18 Aligned_cols=212 Identities=17% Similarity=0.091 Sum_probs=154.1
Q ss_pred CCCCCceeEeecC--CCccccccHHHHhhcCCceEEEecC------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEe
Q psy1119 1153 PVGNNNTIFMVPG--IEGIATVLEPLAKNINAQVLVFQFD------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVG 1224 (1392)
Q Consensus 1153 ~~g~~~pLF~vp~--agG~~~~y~~La~~L~~~~~v~~l~------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G 1224 (1392)
.++.++||+|+|+ ++|+...|.+|++.|...+.|+.++ .+.++.+++++++.+++.|+..+ +.+||+|+|
T Consensus 77 ~~~~~~~lv~lhG~~~~~~~~~~~~~~~~L~~~~~v~~~d~~G~G~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~lvG 154 (319)
T 3lcr_A 77 RGQLGPQLILVCPTVMTTGPQVYSRLAEELDAGRRVSALVPPGFHGGQALPATLTVLVRSLADVVQAEV--ADGEFALAG 154 (319)
T ss_dssp SCCSSCEEEEECCSSTTCSGGGGHHHHHHHCTTSEEEEEECTTSSTTCCEESSHHHHHHHHHHHHHHHH--TTSCEEEEE
T ss_pred CCCCCCeEEEECCCCcCCCHHHHHHHHHHhCCCceEEEeeCCCCCCCCCCCCCHHHHHHHHHHHHHHhc--CCCCEEEEE
Confidence 3456789999999 5788999999999998888888875 34556799999999999998653 668999999
Q ss_pred echhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHH----HhcCCccccCCHHHHHHHHHHHHH
Q psy1119 1225 FSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYF----LDLMPEDATHSRTYQRNLAHAAYK 1299 (1392)
Q Consensus 1225 ~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~----~~~~~~~~~~~~~~l~~~~~~~~~ 1299 (1392)
|||||.||+++|.++++++..+ .|+++|++++.... .........+ ..........+ .+...+..+..
T Consensus 155 hS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~ 227 (319)
T 3lcr_A 155 HSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDG-----GRPEELFRSALNERFVEYLRLTGGG--NLSQRITAQVW 227 (319)
T ss_dssp ETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSC-----CHHHHHHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHH
T ss_pred ECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccc-----hhhHHHHHHHHHHHHhhhhcccCCC--chhHHHHHHHH
Confidence 9999999999999999998888 89999997654321 0111111111 11000000111 01223344556
Q ss_pred HHHhhccccCCCCCcccceEEEEeeCCCCCCChhhcCcccccCCCeEEEEEccCccccccChHHHHHHHhhhcccCC
Q psy1119 1300 RITSILKYTDPKHKAFGGNITLLRPTEQALPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDSTDFK 1376 (1392)
Q Consensus 1300 ~~~~~~~y~~~~~~~~~~pi~l~~a~~~~~~~~~~~~W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~~~L~~ 1376 (1392)
.+.+...|++. ++++|+++++++++.........|.+...+...++.++|+|+.|+++++...++..+...|..
T Consensus 228 ~~~~~~~~~~~---~i~~PvLli~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~H~~~~~~~~~~~va~~i~~fL~~ 301 (319)
T 3lcr_A 228 CLELLRGWRPE---GLTAPTLYVRPAQPLVEQEKPEWRGDVLAAMGQVVEAPGDHFTIIEGEHVASTAHIVGDWLRE 301 (319)
T ss_dssp HHHHTTTCCCC---CCSSCEEEEEESSCSSSCCCTHHHHHHHHTCSEEEEESSCTTGGGSTTTHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCC---CcCCCEEEEEeCCCCCCcccchhhhhcCCCCceEEEeCCCcHHhhCcccHHHHHHHHHHHHHh
Confidence 66777888774 799999999998854545566689888888899999999999999855556666666666654
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.8e-16 Score=179.02 Aligned_cols=154 Identities=15% Similarity=0.108 Sum_probs=124.7
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
+++|||||+||||+++|+.|+++|++ |++++|+..... . .+.+|+++.+++++++++. .++
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~----------~------~~~~Dl~~~~~v~~~~~~~--~~~ 62 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQ-IVGIDIRDAEVI----------A------DLSTAEGRKQAIADVLAKC--SKG 62 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSSSSEE----------C------CTTSHHHHHHHHHHHHTTC--TTC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCchhhc----------c------ccccCCCCHHHHHHHHHHh--CCC
Confidence 58999999999999999999999997 888888853321 1 1679999999998887632 389
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccc-----------------
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCG----------------- 922 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~----------------- 922 (1392)
||+||||||+.... +.|++.+++|+.|++++.+++.+.+. ..+.||++||.++.
T Consensus 63 id~lv~~Ag~~~~~-------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~ 135 (257)
T 1fjh_A 63 MDGLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGE 135 (257)
T ss_dssp CSEEEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTC
T ss_pred CCEEEECCCCCCCc-------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccc
Confidence 99999999986411 23899999999999999998876543 33899999999988
Q ss_pred -----------cCCCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 923 -----------RGNAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 923 -----------~G~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
.+.++.+.|+++|++++.|++..+.+ |+...+|..|.+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 189 (257)
T 1fjh_A 136 EAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATE 189 (257)
T ss_dssp HHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC--
T ss_pred hhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCC
Confidence 34557899999999999999877654 7888888888663
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.9e-16 Score=176.43 Aligned_cols=215 Identities=15% Similarity=0.204 Sum_probs=132.6
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC----C---CCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD----H---TNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~----~---e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
+.++||||+|++||++..|.++++.|.....|+.++ + .+..++++++++.+++++. .++.+||+|+||||
T Consensus 11 ~~~~~lv~lhg~g~~~~~~~~~~~~L~~~~~vi~~Dl~GhG~S~~~~~~~~~~~~~~~~~~l~---~~~~~~~~lvGhSm 87 (242)
T 2k2q_B 11 SEKTQLICFPFAGGYSASFRPLHAFLQGECEMLAAEPPGHGTNQTSAIEDLEELTDLYKQELN---LRPDRPFVLFGHSM 87 (242)
T ss_dssp TCCCEEESSCCCCHHHHHHHHHHHHHCCSCCCEEEECCSSCCSCCCTTTHHHHHHHHTTTTCC---CCCCSSCEEECCSS
T ss_pred CCCceEEEECCCCCCHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCCcCCHHHHHHHHHHHHH---hhcCCCEEEEeCCH
Confidence 345799999999999999999999998777777765 1 2234567777777665553 34568999999999
Q ss_pred hHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhc--CCccccCCHHHHHHHHHHHHHHHHhh
Q psy1119 1228 GGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDL--MPEDATHSRTYQRNLAHAAYKRITSI 1304 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~ 1304 (1392)
||.||+++|.++++.|..+ .+++.+..++............++.+..+... .+.....+.+....+.+.++.++.+.
T Consensus 88 GG~iA~~~A~~~~~~~~~p~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (242)
T 2k2q_B 88 GGMITFRLAQKLEREGIFPQAVIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAELVENKEVMSFFLPSFRSDYRAL 167 (242)
T ss_dssp CCHHHHHHHHHHHHHHCSSCSEEEEEEECSCCCSCCCSSCTTHHHHHTTCCTTCCCCTTTHHHHTTTTCCSCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCCCEEEEECCCCCCCCcccccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHH
Confidence 9999999999998766433 45554433332211110011112222222111 11111001111111223345556666
Q ss_pred ccccCCCCCcccceEEEEeeCCCCCCChhhcCcccccCCCeEEEEEccCccccccChHHHHHHHhhhcccC
Q psy1119 1305 LKYTDPKHKAFGGNITLLRPTEQALPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDSTDF 1375 (1392)
Q Consensus 1305 ~~y~~~~~~~~~~pi~l~~a~~~~~~~~~~~~W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~~~L~ 1375 (1392)
..|......++++|++++.+++|.........|.++..+. .++.++|+|+.+++++. ..+..+...|.
T Consensus 168 ~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~gH~~~~e~p~--~~~~~i~~fl~ 235 (242)
T 2k2q_B 168 EQFELYDLAQIQSPVHVFNGLDDKKCIRDAEGWKKWAKDI-TFHQFDGGHMFLLSQTE--EVAERIFAILN 235 (242)
T ss_dssp TCCCCSCCTTCCCSEEEEEECSSCCHHHHHHHHHTTCCCS-EEEEEECCCSHHHHHCH--HHHHHHHHHHH
T ss_pred HhcccCCCCccCCCEEEEeeCCCCcCHHHHHHHHHHhcCC-eEEEEeCCceeEcCCHH--HHHHHHHHHhh
Confidence 6665543457899999999998863223345687776554 48888999999988764 33444444444
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=3.8e-15 Score=169.42 Aligned_cols=153 Identities=17% Similarity=0.143 Sum_probs=127.9
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
.+++|||||+||||+++|+.|+++|++ |++++|+..... +..+.++.+|++|.++++++++
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~-V~~~~r~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~------ 63 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEI-LRLADLSPLDPA------------GPNEECVQCDLADANAVNAMVA------ 63 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEE-EEEEESSCCCCC------------CTTEEEEECCTTCHHHHHHHHT------
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCE-EEEEecCCcccc------------CCCCEEEEcCCCCHHHHHHHHc------
Confidence 468999999999999999999999986 888888854321 4568889999999999998876
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccc------------cCCCCC
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCG------------RGNAGQ 928 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~------------~G~~gq 928 (1392)
.+|.||||||+. +.+.|++.+++|+.|+++|.++++.. ..+.||++||+++. .+....
T Consensus 64 ~~D~vi~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~ 133 (267)
T 3rft_A 64 GCDGIVHLGGIS--------VEKPFEQILQGNIIGLYNLYEAARAH--GQPRIVFASSNHTIGYYPQTERLGPDVPARPD 133 (267)
T ss_dssp TCSEEEECCSCC--------SCCCHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCC
T ss_pred CCCEEEECCCCc--------CcCCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcchHHhCCCCCCCCCCCCCCCCCC
Confidence 689999999983 34568899999999999999998654 45799999999877 333566
Q ss_pred hhHHHHHHHHHHHHHHHH-HcCCCeEEEEccccCc
Q psy1119 929 TNYGMANSIMERICEARR-AEGLPGLAVEWGAVGE 962 (1392)
Q Consensus 929 ~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~~~ 962 (1392)
+.|+++|.+++.+++... ..|++...|..|.+-+
T Consensus 134 ~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~ 168 (267)
T 3rft_A 134 GLYGVSKCFGENLARMYFDKFGQETALVRIGSCTP 168 (267)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSS
T ss_pred ChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccC
Confidence 899999999999998655 4599998898887754
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=9.2e-14 Score=155.77 Aligned_cols=216 Identities=17% Similarity=0.251 Sum_probs=158.7
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCceEEEecC--------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD--------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~--------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
.+++|+|+|+.+|+...|.++++.|.....++.++ ..+...+++++++.+.+.++.. +.+|+.|+||||
T Consensus 19 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~lvG~S~ 95 (267)
T 3fla_A 19 ARARLVCLPHAGGSASFFFPLAKALAPAVEVLAVQYPGRQDRRHEPPVDSIGGLTNRLLEVLRPF---GDRPLALFGHSM 95 (267)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHHTTTEEEEEECCTTSGGGTTSCCCCSHHHHHHHHHHHTGGG---TTSCEEEEEETH
T ss_pred CCceEEEeCCCCCCchhHHHHHHHhccCcEEEEecCCCCCCCCCCCCCcCHHHHHHHHHHHHHhc---CCCceEEEEeCh
Confidence 45789999999999999999999998778888876 2334569999999999988743 578999999999
Q ss_pred hHHHHHHHHHHHHHcCCc-c-EEEEEeCCCCCCcc-ccCCCCChHHHHHHHHhcC--CccccCCHHHHHHHHHHHHHHHH
Q psy1119 1228 GGMVALELAIKLEQLGTK-C-HLYLVDSAPDYVLT-SLRKLPDWNAKLNYFLDLM--PEDATHSRTYQRNLAHAAYKRIT 1302 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~-v-~LvLiD~~p~~~~~-~l~~~~~~~~~l~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~ 1302 (1392)
||.+|+++|.+..+++.. + .++++++.++.... ..............+.... +.....+++....+.+.++.++.
T Consensus 96 Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (267)
T 3fla_A 96 GAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAMLADPELLAMVLPAIRSDYR 175 (267)
T ss_dssp HHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcchhhccCHHHHHHHHHHHHHHHH
Confidence 999999999998776633 4 78888876554321 1111222333333333221 12222356677778888888888
Q ss_pred hhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEccCccccccChHHHHHHHhhhcccCC
Q psy1119 1303 SILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDSTDFK 1376 (1392)
Q Consensus 1303 ~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~~~L~~ 1376 (1392)
....|.+....++++|++++.++.|. ........|.+...+.++++.++|+|+.+++++. .+...+...|++
T Consensus 176 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~~~--~~~~~i~~fl~~ 248 (267)
T 3fla_A 176 AVETYRHEPGRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTGPADLRVLPGGHFFLVDQAA--PMIATMTEKLAG 248 (267)
T ss_dssp HHHHCCCCTTCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSSCEEEEEESSSTTHHHHTHH--HHHHHHHHHTC-
T ss_pred hhhcccccccCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCCceEEEecCCceeeccCHH--HHHHHHHHHhcc
Confidence 88888876556789999999999987 5556667788888777999999999999998764 334444444443
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.3e-14 Score=167.68 Aligned_cols=205 Identities=18% Similarity=0.130 Sum_probs=139.5
Q ss_pred CCCCceeEeecCCCccc--cccHHHHhhcCCceEEEecC------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1154 VGNNNTIFMVPGIEGIA--TVLEPLAKNINAQVLVFQFD------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1154 ~g~~~pLF~vp~agG~~--~~y~~La~~L~~~~~v~~l~------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
.+.++||+|+|+.+|+. ..|..++..|.....++.++ .+.+..+++++++.+.+.+.+.. +.+||+|+||
T Consensus 64 ~~~~~~lvllhG~~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~a~~~~~~l~~~~--~~~~~~LvGh 141 (300)
T 1kez_A 64 GPGEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPLPSSMAAVAAVQADAVIRTQ--GDKPFVVAGH 141 (300)
T ss_dssp CSCSSEEEECCCSSTTCSTTTTHHHHHHTSSSCCBCCCCCTTSSTTCCBCSSHHHHHHHHHHHHHHHC--SSCCEEEECC
T ss_pred CCCCCeEEEECCCcccCcHHHHHHHHHhcCCCceEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHhc--CCCCEEEEEE
Confidence 45568999999999977 99999999998777777765 33456799999999998876543 6789999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCcc--ccCCHHHHHHHHHHHHHHHH
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPED--ATHSRTYQRNLAHAAYKRIT 1302 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~ 1302 (1392)
||||.||+++|.++.+.|..+ .|+++|+.++..... .......+...+... ....... ...+...+.
T Consensus 142 S~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 211 (300)
T 1kez_A 142 SAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDA------MNAWLEELTATLFDRETVRMDDTR----LTALGAYDR 211 (300)
T ss_dssp THHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHH------HHHHHHHHHGGGCCCCSSCCCHHH----HHHHHHHHH
T ss_pred CHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhH------HHHHHHHHHHHHHhCcCCccchHH----HHHHHHHHH
Confidence 999999999999998888777 889999876532100 111111222111111 0112222 222333444
Q ss_pred hhccccCCCCCcccceEEEEeeCCCCCCChhhcCcccccCCCeEEEEEccCccccc-cChHHHHHHHhhhcccCC
Q psy1119 1303 SILKYTDPKHKAFGGNITLLRPTEQALPTAEDYGLSKVCKKPVKVHFVDGNHFTVL-DNIKSAQIIMHEDSTDFK 1376 (1392)
Q Consensus 1303 ~~~~y~~~~~~~~~~pi~l~~a~~~~~~~~~~~~W~~~~~g~v~v~~v~G~H~~ml-~~~~~~~i~~~l~~~L~~ 1376 (1392)
+...|.+. ++++|++++.+.++...... ..|.+...+..+++.++|+|+.++ +++. .++..+...|..
T Consensus 212 ~~~~~~~~---~i~~P~lii~G~d~~~~~~~-~~~~~~~~~~~~~~~i~ggH~~~~~e~~~--~~~~~i~~fl~~ 280 (300)
T 1kez_A 212 LTGQWRPR---ETGLPTLLVSAGEPMGPWPD-DSWKPTWPFEHDTVAVPGDHFTMVQEHAD--AIARHIDAWLGG 280 (300)
T ss_dssp HTTTCCCC---CCSCCBEEEEESSCSSCCCS-SCCSCCCSSCCEEEEESSCTTTSSSSCSH--HHHHHHHHHHTC
T ss_pred HHhcCCCC---CCCCCEEEEEeCCCCCCCcc-cchhhhcCCCCeEEEecCCChhhccccHH--HHHHHHHHHHHh
Confidence 55566543 78999999999654433333 578888877889999999999998 5543 233334444443
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.57 E-value=6.9e-15 Score=165.43 Aligned_cols=154 Identities=16% Similarity=0.120 Sum_probs=126.1
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
+++|||||+||||+++|+.|+++|++ |++++|+..... . .+.+|+++.+++++++++. .++
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~-V~~~~r~~~~~~----------~------~~~~D~~~~~~~~~~~~~~--~~~ 62 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHT-VIGIDRGQADIE----------A------DLSTPGGRETAVAAVLDRC--GGV 62 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSSSSEE----------C------CTTSHHHHHHHHHHHHHHH--TTC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCE-EEEEeCChhHcc----------c------cccCCcccHHHHHHHHHHc--CCC
Confidence 57999999999999999999999997 888888754321 0 1678999999999888754 378
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCC--------------
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGN-------------- 925 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~-------------- 925 (1392)
+|+||||||+... .+.|+..+++|+.|++++.+++.+.+. ..+.||++||.++..+.
T Consensus 63 ~d~vi~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~ 135 (255)
T 2dkn_A 63 LDGLVCCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGD 135 (255)
T ss_dssp CSEEEECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTC
T ss_pred ccEEEECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccc
Confidence 9999999997542 134889999999999999998866542 24799999999988765
Q ss_pred ------------CCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 926 ------------AGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 926 ------------~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++...|+++|++++.+++..+.+ |++..++..|.+.
T Consensus 136 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~ 187 (255)
T 2dkn_A 136 EARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVE 187 (255)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBC
T ss_pred hhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCccc
Confidence 57789999999999999987654 8888888887663
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=3.5e-14 Score=201.52 Aligned_cols=177 Identities=12% Similarity=0.096 Sum_probs=133.2
Q ss_pred CCCCeEEEEcCcch-HHHHHHHHHHHhCCceEEEecCCCccc--HHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGG-FGLELADWLVLRGARKLVLTSRSGVKN--GYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 779 ~~~~~ylItGG~gG-iG~~lA~~La~~GAr~lvl~sRs~~~~--~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
..+|++|||||++| ||+++|+.|+++||+ |++++|+.... ...++..+++...|.++..+.||++++++++++++.
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~-Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGAT-VIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTCE-EEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCCE-EEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence 57899999999999 999999999999997 77788875331 113445566677788999999999999999999999
Q ss_pred H-h----hcCCccEEEECcccC----C-CccccCCCHHHHHHH----HhhHhHHHHHHHHHHhhhCCCC------CeEEE
Q psy1119 856 A-N----KLGPVDGIFNLAVVL----K-DALFENQTPEDFNAS----LGPKANATKYFDKYSRTMCPTL------GQFVV 915 (1392)
Q Consensus 856 ~-~----~~g~I~gvi~~Agv~----~-d~~~~~~t~e~~~~~----~~~kv~g~~~L~~~~~~~~~~l------~~fV~ 915 (1392)
+ + ++|+||++|||||+. . .....+.+.++|+.. ++.++.+++.+.+++.+.+... ..++.
T Consensus 2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D 2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence 8 5 789999999999972 1 234455566666555 9999999999988776544221 12333
Q ss_pred ecccccccCCCCChhHHHHHHHHHHHHHHHHHc--CCCeEEEEcc
Q psy1119 916 FSSVSCGRGNAGQTNYGMANSIMERICEARRAE--GLPGLAVEWG 958 (1392)
Q Consensus 916 ~SS~s~~~G~~gq~~Yaaana~ld~la~~r~~~--Glp~~ai~~g 958 (1392)
.||..+.. ++++.|+++|+++.+|++..+.+ .-+.+.+|--
T Consensus 2293 ~ss~~g~~--g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v 2335 (3089)
T 3zen_D 2293 GSPNRGMF--GGDGAYGEAKSALDALENRWSAEKSWAERVSLAHA 2335 (3089)
T ss_dssp ECSSTTSC--SSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEE
T ss_pred CCcccccC--CCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEE
Confidence 34443333 35679999999999999999999 3344444433
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.6e-13 Score=152.80 Aligned_cols=156 Identities=12% Similarity=0.073 Sum_probs=121.2
Q ss_pred ccccCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceE-EEEeccCCCHHHHHHHH
Q psy1119 775 RYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQV-LISTDDITTEAGVVNLL 853 (1392)
Q Consensus 775 ~~~~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v-~~~~~Dv~~~~~v~~l~ 853 (1392)
...-..+++++||||+|+||+++++.|+++|++ |++++|+.... +.+...+ + .++.+|++
T Consensus 15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~-V~~~~R~~~~~-------~~~~~~~--~~~~~~~Dl~--------- 75 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHE-PVAMVRNEEQG-------PELRERG--ASDIVVANLE--------- 75 (236)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSGGGH-------HHHHHTT--CSEEEECCTT---------
T ss_pred cccCcCCCeEEEECCCChHHHHHHHHHHhCCCe-EEEEECChHHH-------HHHHhCC--CceEEEcccH---------
Confidence 334456899999999999999999999999996 88889985332 1222334 5 66889999
Q ss_pred HHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC---CCCh
Q psy1119 854 TEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN---AGQT 929 (1392)
Q Consensus 854 ~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~---~gq~ 929 (1392)
+.+ +.++.+|.|||+||.... ++|+..++.|+.|+.++.++++.. ..+.||++||..+..+. ....
T Consensus 76 ~~~~~~~~~~D~vi~~ag~~~~--------~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~~~~~ 145 (236)
T 3e8x_A 76 EDFSHAFASIDAVVFAAGSGPH--------TGADKTILIDLWGAIKTIQEAEKR--GIKRFIMVSSVGTVDPDQGPMNMR 145 (236)
T ss_dssp SCCGGGGTTCSEEEECCCCCTT--------SCHHHHHHTTTHHHHHHHHHHHHH--TCCEEEEECCTTCSCGGGSCGGGH
T ss_pred HHHHHHHcCCCEEEECCCCCCC--------CCccccchhhHHHHHHHHHHHHHc--CCCEEEEEecCCCCCCCCChhhhh
Confidence 223 446789999999997542 468899999999999999988654 45799999998777664 5788
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCeEEEEccccCc
Q psy1119 930 NYGMANSIMERICEARRAEGLPGLAVEWGAVGE 962 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~Glp~~ai~~g~~~~ 962 (1392)
.|+++|++++.+++ ..|++...+..|.+-+
T Consensus 146 ~Y~~sK~~~e~~~~---~~gi~~~~lrpg~v~~ 175 (236)
T 3e8x_A 146 HYLVAKRLADDELK---RSSLDYTIVRPGPLSN 175 (236)
T ss_dssp HHHHHHHHHHHHHH---HSSSEEEEEEECSEEC
T ss_pred hHHHHHHHHHHHHH---HCCCCEEEEeCCcccC
Confidence 99999999999886 6799999999887643
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.44 E-value=5.8e-13 Score=154.26 Aligned_cols=179 Identities=13% Similarity=-0.004 Sum_probs=134.7
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHH-HhCCceEEEecCCCcccH---------HHHHHHHHHhcCCceEEEEeccCCCHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLV-LRGARKLVLTSRSGVKNG---------YQALRIKIWKSYDVQVLISTDDITTEAG 848 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La-~~GAr~lvl~sRs~~~~~---------~~~~~~~~l~~~G~~v~~~~~Dv~~~~~ 848 (1392)
...|++|||||++|||+++|..|| ..||. +++++|.....+ ......+..++.|.++..+.||+++.++
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~-vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~ 126 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAA-TIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI 126 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCE-EEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCC-EEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence 356899999999999999999999 67997 666665432211 2344556677889999999999999999
Q ss_pred HHHHHHHH-hhcCCccEEEECcccCCCc----------------------------------cccCCCHHH---HHHHHh
Q psy1119 849 VVNLLTEA-NKLGPVDGIFNLAVVLKDA----------------------------------LFENQTPED---FNASLG 890 (1392)
Q Consensus 849 v~~l~~~~-~~~g~I~gvi~~Agv~~d~----------------------------------~~~~~t~e~---~~~~~~ 890 (1392)
++++++++ +++|+||++||+++..... .++..|.++ +..+|.
T Consensus 127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg 206 (401)
T 4ggo_A 127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG 206 (401)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence 99999999 6799999999999864210 122345554 445555
Q ss_pred hHhHHHHHHHHHHhhhCCCCCeEEEeccccccc--CCCCChhHHHHHHHHHHHHHHHHHcCCCeEEEEccc
Q psy1119 891 PKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR--GNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGA 959 (1392)
Q Consensus 891 ~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~--G~~gq~~Yaaana~ld~la~~r~~~Glp~~ai~~g~ 959 (1392)
.-....|.......+++.+...+|.+|++.+-. ++.+.+.+++||++|++.+++++.+..| ..++...
T Consensus 207 ~s~~s~w~~al~~a~lla~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~-~~a~v~v 276 (401)
T 4ggo_A 207 GEDWERWIKQLSKEGLLEEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS-IRAFVSV 276 (401)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT-EEEEEEE
T ss_pred hhHHHHHHHHHHhhhcccCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC-CcEEEEE
Confidence 556667777777777666778999999987754 4556678899999999999999998766 3344433
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-12 Score=157.76 Aligned_cols=168 Identities=16% Similarity=0.208 Sum_probs=126.6
Q ss_pred CeEEEEcCcchHHHHHHHHHH-HhCCceEEEecCCCccc---------HHHHHHHHHHhcC--Cce---EEEEeccCCCH
Q psy1119 782 KSYIICGGLGGFGLELADWLV-LRGARKLVLTSRSGVKN---------GYQALRIKIWKSY--DVQ---VLISTDDITTE 846 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La-~~GAr~lvl~sRs~~~~---------~~~~~~~~~l~~~--G~~---v~~~~~Dv~~~ 846 (1392)
.++|||||+|+||.++++.|+ ++|++ |++++|+.... ......++.+... ... +.++.+|++|.
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHS-VVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCE-EEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCE-EEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 479999999999999999999 99986 77778764331 1111112222111 113 77889999999
Q ss_pred HHHHHHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC
Q psy1119 847 AGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA 926 (1392)
Q Consensus 847 ~~v~~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~ 926 (1392)
+++.++++. ++++|+|||+|+...... +.+++...+++|+.|+.+|.+++... ..+.||++||.+ ..|.+
T Consensus 82 ~~~~~~~~~---~~~~d~vih~A~~~~~~~----~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~~~iv~~SS~~-v~g~~ 151 (397)
T 1gy8_A 82 DFLNGVFTR---HGPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAMLLH--KCDKIIFSSSAA-IFGNP 151 (397)
T ss_dssp HHHHHHHHH---SCCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGG-GTBSC
T ss_pred HHHHHHHHh---cCCCCEEEECCCccCcCc----chhhHHHHHHHHhHHHHHHHHHHHHh--CCCEEEEECCHH-HhCCC
Confidence 998887764 567999999999754221 45678899999999999999987653 457999999964 44544
Q ss_pred C-------------------ChhHHHHHHHHHHHHHHHHHc-CCCeEEEEcccc
Q psy1119 927 G-------------------QTNYGMANSIMERICEARRAE-GLPGLAVEWGAV 960 (1392)
Q Consensus 927 g-------------------q~~Yaaana~ld~la~~r~~~-Glp~~ai~~g~~ 960 (1392)
. ...|+++|.+++.+++..+.+ |++...+..+.+
T Consensus 152 ~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v 205 (397)
T 1gy8_A 152 TMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNA 205 (397)
T ss_dssp CC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEE
T ss_pred CcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccce
Confidence 3 679999999999999886655 899888887765
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.43 E-value=1.9e-12 Score=152.13 Aligned_cols=167 Identities=14% Similarity=0.146 Sum_probs=127.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.++++|||||+|+||+++|+.|+++|++ |++++|+..........+.... +..+.++.+|++|.++++++++.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~---- 76 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYD-VVIADNLVNSKREAIARIEKIT--GKTPAFHETDVSDERALARIFDA---- 76 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCE-EEEECCCSSSCTHHHHHHHHHH--SCCCEEECCCTTCHHHHHHHHHH----
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCc-EEEEecCCcchHHHHHHHHhhc--CCCceEEEeecCCHHHHHHHHhc----
Confidence 4578999999999999999999999997 7788887655444333333322 44677889999999999998876
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC------------C
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA------------G 927 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~------------g 927 (1392)
+.+|.|||+|+....... .+...+.++.|+.|+.++.++++.. ..+.||++||.+.. |.+ .
T Consensus 77 ~~~d~vih~A~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~-g~~~~~~~~e~~~~~~ 149 (341)
T 3enk_A 77 HPITAAIHFAALKAVGES----VAKPIEYYRNNLDSLLSLLRVMRER--AVKRIVFSSSATVY-GVPERSPIDETFPLSA 149 (341)
T ss_dssp SCCCEEEECCCCCCHHHH----HHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGB-CSCSSSSBCTTSCCBC
T ss_pred cCCcEEEECccccccCcc----ccChHHHHHHHHHHHHHHHHHHHhC--CCCEEEEEecceEe-cCCCCCCCCCCCCCCC
Confidence 479999999997543322 2334567788999999998887653 45799999997654 332 2
Q ss_pred ChhHHHHHHHHHHHHHHHHHc--CCCeEEEEcccc
Q psy1119 928 QTNYGMANSIMERICEARRAE--GLPGLAVEWGAV 960 (1392)
Q Consensus 928 q~~Yaaana~ld~la~~r~~~--Glp~~ai~~g~~ 960 (1392)
.+.|+++|.+.+.+++..+.+ |++...+..+.+
T Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v 184 (341)
T 3enk_A 150 TNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNP 184 (341)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEE
T ss_pred CChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccc
Confidence 368999999999999976655 478877776654
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.42 E-value=7.3e-13 Score=154.35 Aligned_cols=160 Identities=16% Similarity=0.059 Sum_probs=124.9
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
+.+.+++|||||+|+||.++++.|+++|++ |++++|+..... + .+.++.+|++|.++++++++.
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~~~--------l-----~~~~~~~Dl~d~~~~~~~~~~-- 72 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNVE-VFGTSRNNEAKL--------P-----NVEMISLDIMDSQRVKKVISD-- 72 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCTTCCC--------T-----TEEEEECCTTCHHHHHHHHHH--
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCCE-EEEEecCCcccc--------c-----eeeEEECCCCCHHHHHHHHHh--
Confidence 456789999999999999999999999996 777888753310 1 467789999999999988876
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC------------
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN------------ 925 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~------------ 925 (1392)
+++|.|||+|+.... +.+.+++...+++|+.|+.++.++++.+ ...+.||++||.+..-+.
T Consensus 73 --~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~ 145 (321)
T 2pk3_A 73 --IKPDYIFHLAAKSSV----KDSWLNKKGTFSTNVFGTLHVLDAVRDS-NLDCRILTIGSSEEYGMILPEESPVSEENQ 145 (321)
T ss_dssp --HCCSEEEECCSCCCH----HHHTTCHHHHHHHHHHHHHHHHHHHHHH-TCCCEEEEEEEGGGTBSCCGGGCSBCTTSC
T ss_pred --cCCCEEEEcCcccch----hhhhhcHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEccHHhcCCCCCCCCCCCCCCC
Confidence 479999999997532 1223467889999999999999988554 246799999998754332
Q ss_pred -CCChhHHHHHHHHHHHHHHHHHc-CCCeEEEEcccc
Q psy1119 926 -AGQTNYGMANSIMERICEARRAE-GLPGLAVEWGAV 960 (1392)
Q Consensus 926 -~gq~~Yaaana~ld~la~~r~~~-Glp~~ai~~g~~ 960 (1392)
.....|+++|.+++.+++..+.+ |++.+.+..+.+
T Consensus 146 ~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v 182 (321)
T 2pk3_A 146 LRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNH 182 (321)
T ss_dssp CBCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEE
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcc
Confidence 45789999999999999876544 899888887765
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=2.1e-12 Score=152.27 Aligned_cols=167 Identities=12% Similarity=0.059 Sum_probs=125.7
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcc------cHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHH
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVK------NGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLT 854 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~------~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~ 854 (1392)
++++|||||+|+||.++++.|+++|++ |++++|+... .......+..+ .+.++.++.+|++|.++++++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~ 78 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYL-PVVIDNFHNAFRGGGSLPESLRRVQEL--TGRSVEFEEMDILDQGALQRLFK 78 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCC-EEEEECSSSSCBCSSSSBHHHHHHHHH--HTCCCEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEecCCcccccccccHHHHHHHHhc--cCCceEEEECCCCCHHHHHHHHH
Confidence 368999999999999999999999987 7777775432 22222222221 24457788999999999988887
Q ss_pred HHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccC----------
Q psy1119 855 EANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRG---------- 924 (1392)
Q Consensus 855 ~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G---------- 924 (1392)
.. .+|.|||+|+...... +.+++...+++|+.|+.++.+++... ..+.||++||.+..-.
T Consensus 79 ~~----~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~~~~~~~E~~ 148 (348)
T 1ek6_A 79 KY----SFMAVIHFAGLKAVGE----SVQKPLDYYRVNLTGTIQLLEIMKAH--GVKNLVFSSSATVYGNPQYLPLDEAH 148 (348)
T ss_dssp HC----CEEEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred hc----CCCEEEECCCCcCccc----hhhchHHHHHHHHHHHHHHHHHHHHh--CCCEEEEECcHHHhCCCCCCCcCCCC
Confidence 52 7999999999753221 34667889999999999999887653 4579999999765421
Q ss_pred --CCCChhHHHHHHHHHHHHHHHHHcC--CCeEEEEcccc
Q psy1119 925 --NAGQTNYGMANSIMERICEARRAEG--LPGLAVEWGAV 960 (1392)
Q Consensus 925 --~~gq~~Yaaana~ld~la~~r~~~G--lp~~ai~~g~~ 960 (1392)
.++...|+++|.+++.+++..+.+| ++.+.+..+.+
T Consensus 149 ~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v 188 (348)
T 1ek6_A 149 PTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNP 188 (348)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEE
T ss_pred CCCCCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccc
Confidence 2347899999999999999876656 88888876554
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=1.8e-12 Score=152.34 Aligned_cols=160 Identities=18% Similarity=0.085 Sum_probs=122.6
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
++++|||||+|+||.++++.|+++|++ |++++|+...... ..++.+. .+.++.++.+|++|.+++.++++.+
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~~~~--~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~---- 74 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYE-VYGADRRSGEFAS--WRLKELG-IENDVKIIHMDLLEFSNIIRTIEKV---- 74 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEECSCCSTTTT--HHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHH----
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE-EEEEECCCccccc--ccHhhcc-ccCceeEEECCCCCHHHHHHHHHhc----
Confidence 578999999999999999999999986 8888887543221 1222221 1235778899999999999998876
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccc-----------cCCCCCh
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCG-----------RGNAGQT 929 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~-----------~G~~gq~ 929 (1392)
++|.|||+||.... +.+.+++...+++|+.|+.++.+++..+. ..+.||++||.+.. .+..+..
T Consensus 75 ~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~ 149 (345)
T 2z1m_A 75 QPDEVYNLAAQSFV----GVSFEQPILTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMFGKVQEIPQTEKTPFYPRS 149 (345)
T ss_dssp CCSEEEECCCCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred CCCEEEECCCCcch----hhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhcCCCCCCCCCccCCCCCCC
Confidence 79999999997531 22345688999999999999999887641 13799999998643 2234567
Q ss_pred hHHHHHHHHHHHHHHHHHc-CCCeE
Q psy1119 930 NYGMANSIMERICEARRAE-GLPGL 953 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~-Glp~~ 953 (1392)
.|+++|.+.+.+++..+.+ |++..
T Consensus 150 ~Y~~sK~~~e~~~~~~~~~~~~~~~ 174 (345)
T 2z1m_A 150 PYAVAKLFGHWITVNYREAYNMFAC 174 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred hhHHHHHHHHHHHHHHHHHhCCceE
Confidence 8999999999999876655 77754
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=2e-12 Score=152.54 Aligned_cols=164 Identities=16% Similarity=0.159 Sum_probs=126.7
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHh-CCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLR-GARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~-GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
+..++++|||||+|+||.+++++|+++ |+.+|++++|+... .....+.+. +..+.++.+|++|.+++.++++
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~---~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~-- 90 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELK---QSEMAMEFN--DPRMRFFIGDVRDLERLNYALE-- 90 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHH---HHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT--
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhh---HHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh--
Confidence 346789999999999999999999999 98668999997422 222233333 2457788999999998887664
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
.+|.|||+|+.... +. ...++.+.+++|+.|+.++.+++.+. ..+.||++||..+..+ ...|+++|+
T Consensus 91 ----~~D~Vih~Aa~~~~-~~---~~~~~~~~~~~Nv~gt~~l~~aa~~~--~v~~~V~~SS~~~~~p---~~~Y~~sK~ 157 (344)
T 2gn4_A 91 ----GVDICIHAAALKHV-PI---AEYNPLECIKTNIMGASNVINACLKN--AISQVIALSTDKAANP---INLYGATKL 157 (344)
T ss_dssp ----TCSEEEECCCCCCH-HH---HHHSHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEECCGGGSSC---CSHHHHHHH
T ss_pred ----cCCEEEECCCCCCC-Cc---hhcCHHHHHHHHHHHHHHHHHHHHhC--CCCEEEEecCCccCCC---ccHHHHHHH
Confidence 68999999997532 11 22345688999999999999988764 4579999999876543 578999999
Q ss_pred HHHHHHHHHHH----cCCCeEEEEccccC
Q psy1119 937 IMERICEARRA----EGLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~----~Glp~~ai~~g~~~ 961 (1392)
+++.+++..+. .|++..++..|.+-
T Consensus 158 ~~E~~~~~~~~~~~~~g~~~~~vRpg~v~ 186 (344)
T 2gn4_A 158 CSDKLFVSANNFKGSSQTQFSVVRYGNVV 186 (344)
T ss_dssp HHHHHHHHGGGCCCSSCCEEEEECCCEET
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEEeccEE
Confidence 99999998765 46777777776653
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.8e-12 Score=153.64 Aligned_cols=169 Identities=17% Similarity=0.135 Sum_probs=130.5
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.++++|||||+|+||.++++.|+++|++ |++++|+........ +.+. .+.++.++.+|+++.+++.++++.+
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~---~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--- 79 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGAT-VKGYSLTAPTVPSLF---ETAR-VADGMQSEIGDIRDQNKLLESIREF--- 79 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCSSSSCHH---HHTT-TTTTSEEEECCTTCHHHHHHHHHHH---
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCe-EEEEeCCCcccchhh---Hhhc-cCCceEEEEccccCHHHHHHHHHhc---
Confidence 4678999999999999999999999996 888888754432221 2222 2345677899999999999988765
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc------------CCCC
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR------------GNAG 927 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~------------G~~g 927 (1392)
++|.|||+|+.. ....+.+++...+++|+.|+.+|.+++... ...+.||++||.+..- +...
T Consensus 80 -~~d~vih~A~~~----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~ 153 (357)
T 1rkx_A 80 -QPEIVFHMAAQP----LVRLSYSEPVETYSTNVMGTVYLLEAIRHV-GGVKAVVNITSDKCYDNKEWIWGYRENEAMGG 153 (357)
T ss_dssp -CCSEEEECCSCC----CHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCC
T ss_pred -CCCEEEECCCCc----ccccchhCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEecCHHHhCCCCcCCCCCCCCCCCC
Confidence 799999999952 123345678899999999999999988764 2357999999986421 2235
Q ss_pred ChhHHHHHHHHHHHHHHHHHc----------CCCeEEEEccccCc
Q psy1119 928 QTNYGMANSIMERICEARRAE----------GLPGLAVEWGAVGE 962 (1392)
Q Consensus 928 q~~Yaaana~ld~la~~r~~~----------Glp~~ai~~g~~~~ 962 (1392)
...|+++|.+.+.+++..+.+ |++...+..|.+-.
T Consensus 154 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G 198 (357)
T 1rkx_A 154 YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIG 198 (357)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEEC
T ss_pred CCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeC
Confidence 678999999999999876543 89999998887643
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.7e-12 Score=152.22 Aligned_cols=156 Identities=13% Similarity=0.181 Sum_probs=121.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
..++++|||||+|+||.++++.|+++|++ |++++|+...... . ++.. ..+.++.+|++|.++++++++..
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~---~---~~~l-~~v~~~~~Dl~d~~~~~~~~~~~-- 87 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLPQGHE-ILVIDNFATGKRE---V---LPPV-AGLSVIEGSVTDAGLLERAFDSF-- 87 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGGGTCE-EEEEECCSSSCGG---G---SCSC-TTEEEEECCTTCHHHHHHHHHHH--
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCCccchh---h---hhcc-CCceEEEeeCCCHHHHHHHHhhc--
Confidence 45689999999999999999999999986 7778886432211 0 1111 24777899999999999988765
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC-----C------C
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN-----A------G 927 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~-----~------g 927 (1392)
.+|.|||+||..... +.+++. +++|+.|+.++.+++... ..+.||++||.+..-+. + .
T Consensus 88 --~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~ 156 (330)
T 2pzm_A 88 --KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAASKA--GVKRLLNFQTALCYGRPATVPIPIDSPTAP 156 (330)
T ss_dssp --CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHHH--TCSEEEEEEEGGGGCSCSSSSBCTTCCCCC
T ss_pred --CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHHHc--CCCEEEEecCHHHhCCCccCCCCcCCCCCC
Confidence 799999999976432 456676 999999999999988654 45799999998764333 2 6
Q ss_pred ChhHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Q psy1119 928 QTNYGMANSIMERICEARRAEGLPGLAVEWG 958 (1392)
Q Consensus 928 q~~Yaaana~ld~la~~r~~~Glp~~ai~~g 958 (1392)
...|+++|.+++.+++.. +++...+..+
T Consensus 157 ~~~Y~~sK~~~e~~~~~~---~~~~~~iR~~ 184 (330)
T 2pzm_A 157 FTSYGISKTAGEAFLMMS---DVPVVSLRLA 184 (330)
T ss_dssp CSHHHHHHHHHHHHHHTC---SSCEEEEEEC
T ss_pred CChHHHHHHHHHHHHHHc---CCCEEEEeee
Confidence 789999999999999864 7887777743
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.40 E-value=3.3e-12 Score=152.02 Aligned_cols=165 Identities=17% Similarity=0.115 Sum_probs=119.3
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc----CCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS----YDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~----~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
++++||||+|+||.++++.|+++|++ |++++|+..... ...++.+.. .+.++.++.+|++|.+++.++++.+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 77 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGYE-VHGIKRRASSFN--TERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV- 77 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH-
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE-EEEEECCCcccc--hHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc-
Confidence 57999999999999999999999986 888888753211 011122211 2456788899999999999988875
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCC-----------
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGN----------- 925 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~----------- 925 (1392)
++|.|||+||.... ..+.+++...+++|+.|+.++.+++.+... ..+.||++||.+..-+.
T Consensus 78 ---~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~ 150 (372)
T 1db3_A 78 ---QPDEVYNLGAMSHV----AVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPF 150 (372)
T ss_dssp ---CCSEEEECCCCCTT----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred ---CCCEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCC
Confidence 68999999997542 234556788999999999999998866421 12799999997654322
Q ss_pred CCChhHHHHHHHHHHHHHHHHHc-CCCeEEEEc
Q psy1119 926 AGQTNYGMANSIMERICEARRAE-GLPGLAVEW 957 (1392)
Q Consensus 926 ~gq~~Yaaana~ld~la~~r~~~-Glp~~ai~~ 957 (1392)
.....|+++|++++.+++..+.+ |++...+-.
T Consensus 151 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~ 183 (372)
T 1db3_A 151 YPRSPYAVAKLYAYWITVNYRESYGMYACNGIL 183 (372)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred CCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 23678999999999999876654 888765443
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.39 E-value=1.8e-12 Score=144.69 Aligned_cols=152 Identities=14% Similarity=0.062 Sum_probs=118.5
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCC--ceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGA--RKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GA--r~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
.+++++||||+||||+++|+.|+++|+ + |++++|+....... .. ..+.++.+|++|+++++++++
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~-V~~~~r~~~~~~~~-------~~--~~~~~~~~D~~d~~~~~~~~~--- 83 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSK-VTLIGRRKLTFDEE-------AY--KNVNQEVVDFEKLDDYASAFQ--- 83 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSE-EEEEESSCCCCCSG-------GG--GGCEEEECCGGGGGGGGGGGS---
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCE-EEEEEcCCCCcccc-------cc--CCceEEecCcCCHHHHHHHhc---
Confidence 468999999999999999999999999 5 88888886432211 11 136678999999888776543
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
.+|.||||||.... .++++..++.|+.|+.++.+++... ..+.||++||.++.. ++...|+++|++
T Consensus 84 ---~~d~vi~~ag~~~~-------~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~iv~~SS~~~~~--~~~~~Y~~sK~~ 149 (242)
T 2bka_A 84 ---GHDVGFCCLGTTRG-------KAGAEGFVRVDRDYVLKSAELAKAG--GCKHFNLLSSKGADK--SSNFLYLQVKGE 149 (242)
T ss_dssp ---SCSEEEECCCCCHH-------HHHHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCT--TCSSHHHHHHHH
T ss_pred ---CCCEEEECCCcccc-------cCCcccceeeeHHHHHHHHHHHHHC--CCCEEEEEccCcCCC--CCcchHHHHHHH
Confidence 79999999996432 2457889999999999998887653 457999999987754 356789999999
Q ss_pred HHHHHHHHHHcCCC-eEEEEccccC
Q psy1119 938 MERICEARRAEGLP-GLAVEWGAVG 961 (1392)
Q Consensus 938 ld~la~~r~~~Glp-~~ai~~g~~~ 961 (1392)
++.+++. .+++ ...+..|.+-
T Consensus 150 ~e~~~~~---~~~~~~~~vrpg~v~ 171 (242)
T 2bka_A 150 VEAKVEE---LKFDRYSVFRPGVLL 171 (242)
T ss_dssp HHHHHHT---TCCSEEEEEECCEEE
T ss_pred HHHHHHh---cCCCCeEEEcCceec
Confidence 9999864 4674 7888877664
|
| >3kg6_A CURF; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.70A {Lyngbya majuscula} | Back alignment and structure |
|---|
Probab=99.39 E-value=3e-12 Score=146.87 Aligned_cols=191 Identities=15% Similarity=0.260 Sum_probs=140.2
Q ss_pred CCceeEeeccccCCCCcccccccchh-hHH----HHHHHHHHHHHHHcCCCCccCCEEeeeeeeeeeeeeCCCCeEEEEE
Q psy1119 32 KGLVQLKNSFRSLSASPKRLASTALD-RVY----QRFQMAWETVSLMRGELYTEVPVVFENIKFMRATNVPKEGSVEFIV 106 (1392)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~l~gh~id-r~l----~yl~l~W~t~a~~~~~~~~~~pv~fe~v~~~rat~l~~~~~v~~~v 106 (1392)
.+...+...++ .++.-||.||+|+ +++ |||.++.+......+ ...++.++||.|+++.+++.++.+++.+
T Consensus 17 ~~~~~~~~~l~--~~~~p~L~dH~v~g~~v~Pga~ylema~~A~~~~~~---~~~~~~l~dv~~~~pl~l~~~~~~~v~~ 91 (285)
T 3kg6_A 17 EDQHRFQSYIG--AESPGYLNHHQVFGKVLFPSTGYLEIAASAGKSLFT---SQEQVVVSDVDILQSLVIPETEIKTVQT 91 (285)
T ss_dssp CSEEEEEEEEB--TTBTGGGGGEEETTEEECCHHHHHHHHHHHHHHHCC---SSSEEEEEEEEECSCCEECTTCCEEEEE
T ss_pred CCceEEEEEeC--CCCCchhhCCEECCEEEecHHHHHHHHHHHHHHhhC---CCCcEEEEeeEEecceEecCCCceEEEE
Confidence 35566888887 4554599999999 777 999999999877654 2347899999999999999988888888
Q ss_pred EEEecc---ccEEEeeC----------CcEEEEEEEEccCCccc-ccccCCCCCCCCCCCcccccCChhhHHHHHHhcCC
Q psy1119 107 MVQKGS---GNFEIVEG----------GAAIVTGKVYIPADVKT-EMVRIPDQYKIPRTEGEAIELQSRDIYKELRLRGY 172 (1392)
Q Consensus 107 ~i~~~s---g~Fei~~~----------~~~vvsG~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~diYkel~lrGy 172 (1392)
.+.+.+ ..|+|.-. -..-++|+|........ ....+.. . .......++.+++|+.|+-+||
T Consensus 92 ~l~~~~~~~~~f~i~s~~~~~~~~~~~w~~h~~G~v~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~Y~~l~~~G~ 166 (285)
T 3kg6_A 92 VVSFAENNSYKFEIFSPSEGENQQTPQWVLHAQGKIYTEPTRNSQAKIDLEK----Y-QAECSQAIEIEEHYREYRSKGI 166 (285)
T ss_dssp EEEEETTTEEEEEEEEEC-------CCEEEEEEEEEEEECCCSSCCBCCHHH----H-HHHCCEEECHHHHHHHHHHHTE
T ss_pred EEEECCCCcEEEEEEecCCCCCCCCCCceEEEEEEEEecCCCCCCCccCHHH----H-HHhcCCCCCHHHHHHHHHHhcc
Confidence 887643 48998742 25678999986432110 1000000 0 0011125889999999999999
Q ss_pred ccCccccceeeeccC--CceeEEEecccc----------hhhhhhhhheecccc---CCCceecccceeeEEEcc
Q psy1119 173 HYKGLFRSLNVADGA--GTQGKIRWHNNW----------VAFMDNMLQLQILQY---DTRGLFVPTSIQKLVINV 232 (1392)
Q Consensus 173 ~y~~~F~~i~~~~~~--g~~g~i~W~~nW----------v~f~d~mlQ~~il~~---~~~~l~~Pt~i~~~~i~p 232 (1392)
+||+.||+|.+.... ...|+|.+...+ -++||+.||..++.. ....++||+.|+++.|..
T Consensus 167 ~yGp~f~~l~~~~~~~~~~~a~v~lp~~~~~~~~~~~lhP~lLD~~lq~~~~~~~~~~~~~~~vP~~i~~l~i~~ 241 (285)
T 3kg6_A 167 DYGSSFQGIKQLWKGQGKALGEMAFPEELTAQLADYQLHPALLDAAFQIVSYAIPHTETDKIYLPVGVEKFKLYR 241 (285)
T ss_dssp EECGGGCCEEEEEECSSEEEEEECCCGGGGGGGGGCSSCHHHHHHHHTTGGGTCC--CCSSCEEEEEEEEEEECC
T ss_pred ccChhccccceeEECCCeEEEEEECChhhhcccccceeChHHHHHHHHHHHHhccccCCCcEEEEEEEeEEEEEc
Confidence 999999999988543 345778876554 368999999977653 346799999999999964
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=4e-12 Score=149.61 Aligned_cols=167 Identities=16% Similarity=0.159 Sum_probs=126.6
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
+++|||||+|+||.++++.|+++|++ |+.++|+..... ....+.++..+ ++.++.+|++|.++++++++.. +
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~--~~~~~~l~~~~-~~~~~~~Dl~d~~~~~~~~~~~----~ 73 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGID-LIVFDNLSRKGA--TDNLHWLSSLG-NFEFVHGDIRNKNDVTRLITKY----M 73 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCCSTTH--HHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHH----C
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCE-EEEEeCCCccCc--hhhhhhhccCC-ceEEEEcCCCCHHHHHHHHhcc----C
Confidence 47999999999999999999999997 777777531111 11223344333 5677899999999999888762 7
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccC-----------------
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRG----------------- 924 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G----------------- 924 (1392)
+|.|||+|+.... +.+.+++...+++|+.|+.++.+++.+... .+.||++||.+..-+
T Consensus 74 ~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~ 148 (347)
T 1orr_A 74 PDSCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS-NCNIIYSSTNKVYGDLEQYKYNETETRYTCVD 148 (347)
T ss_dssp CSEEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEEEEGGGGTTCTTSCEEECSSCEEETT
T ss_pred CCEEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CceEEEeccHHHhCCCCcCCcccccccccccc
Confidence 9999999996431 234567889999999999999998876532 258999999764321
Q ss_pred ----------CCCChhHHHHHHHHHHHHHHHHHc-CCCeEEEEccccC
Q psy1119 925 ----------NAGQTNYGMANSIMERICEARRAE-GLPGLAVEWGAVG 961 (1392)
Q Consensus 925 ----------~~gq~~Yaaana~ld~la~~r~~~-Glp~~ai~~g~~~ 961 (1392)
......|+++|.+.+.+++....+ |++...+..|.+-
T Consensus 149 ~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~ 196 (347)
T 1orr_A 149 KPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMY 196 (347)
T ss_dssp CTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEE
T ss_pred cccCccccCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCcee
Confidence 235678999999999999876544 8999988888754
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=5.2e-12 Score=149.32 Aligned_cols=169 Identities=14% Similarity=0.063 Sum_probs=127.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHH-HHHHHHHHhc-CCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGY-QALRIKIWKS-YDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~-~~~~~~~l~~-~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
..+++|||||+|+||.++++.|+++|++ |+.++|+...... .....+.+.. .+..+.++.+|++|.+++.++++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--- 101 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQK-VVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--- 101 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc---
Confidence 4578999999999999999999999986 7778887533221 1111122111 02357788999999998887765
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC-----------
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA----------- 926 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~----------- 926 (1392)
.+|.|||+|+..... .+.+++...+++|+.|+.++.+++... ..+.||++||.+..-+..
T Consensus 102 ---~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~E~~~~~ 172 (352)
T 1sb8_A 102 ---GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARDA--KVQSFTYAASSSTYGDHPGLPKVEDTIGK 172 (352)
T ss_dssp ---TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTCCCSSBCTTCCCC
T ss_pred ---CCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHhcCCCCCCCCCCCCCCC
Confidence 699999999964321 144678899999999999999988653 457999999987754443
Q ss_pred CChhHHHHHHHHHHHHHHHHH-cCCCeEEEEccccC
Q psy1119 927 GQTNYGMANSIMERICEARRA-EGLPGLAVEWGAVG 961 (1392)
Q Consensus 927 gq~~Yaaana~ld~la~~r~~-~Glp~~ai~~g~~~ 961 (1392)
....|+++|.+.+.+++..+. .|++...+..|.+-
T Consensus 173 ~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~ 208 (352)
T 1sb8_A 173 PLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVF 208 (352)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEE
T ss_pred CCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECcee
Confidence 367999999999999987654 49999999887653
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.1e-12 Score=159.64 Aligned_cols=162 Identities=15% Similarity=0.073 Sum_probs=123.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc---------CCceEEEEeccCCCHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS---------YDVQVLISTDDITTEAGVV 850 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~---------~G~~v~~~~~Dv~~~~~v~ 850 (1392)
+.+++|||||+|+||.++++.|+++|++ |+++.|+...........+.++. .+.++.++.+|+++++.+.
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 146 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYSHR-IYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 146 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTEEE-EEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCCCE-EEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence 4579999999999999999999999996 88888886533333332222221 2356888999999988776
Q ss_pred HHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC-----
Q psy1119 851 NLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN----- 925 (1392)
Q Consensus 851 ~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~----- 925 (1392)
.++.+|.|||+|+... ..+++...+++|+.|+.++.+++.. ....||++||++. |.
T Consensus 147 -------~~~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~---~~~~~v~~SS~~~--G~~~~~~ 207 (427)
T 4f6c_A 147 -------LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISV--GTYFDID 207 (427)
T ss_dssp -------CSSCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH---TTCEEEEEEEGGG--GSEECSS
T ss_pred -------CcCCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh---cCCcEEEECchHh--CCCccCC
Confidence 5678999999999763 2357889999999999999998866 4579999999887 32
Q ss_pred ---------------CCChhHHHHHHHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 926 ---------------AGQTNYGMANSIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 926 ---------------~gq~~Yaaana~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
.....|+++|.+.+.+++..+..|++...+..|.+-
T Consensus 208 ~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~ 258 (427)
T 4f6c_A 208 TEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLT 258 (427)
T ss_dssp CSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEE
T ss_pred CCCccccccccccCCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeee
Confidence 267899999999999999988889999999988764
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=8.6e-12 Score=150.18 Aligned_cols=177 Identities=10% Similarity=0.005 Sum_probs=126.7
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHH-------------HHHHHHH-hcCCceEEEEeccC
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQ-------------ALRIKIW-KSYDVQVLISTDDI 843 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~-------------~~~~~~l-~~~G~~v~~~~~Dv 843 (1392)
+.....+|||||+|.||.++++.|+++|++ |++++|+....... ...+..+ ...+..+.++.+|+
T Consensus 8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl 86 (404)
T 1i24_A 8 HHHGSRVMVIGGDGYCGWATALHLSKKNYE-VCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDI 86 (404)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCT
T ss_pred ccCCCeEEEeCCCcHHHHHHHHHHHhCCCe-EEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCC
Confidence 456789999999999999999999999997 77777753111000 0011111 11134577789999
Q ss_pred CCHHHHHHHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc
Q psy1119 844 TTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR 923 (1392)
Q Consensus 844 ~~~~~v~~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~ 923 (1392)
+|.+++.++++.. ++|.|||+||...... ...+.++|...+++|+.|+.++.+++.... ....||++||.+..-
T Consensus 87 ~d~~~~~~~~~~~----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vyg 160 (404)
T 1i24_A 87 CDFEFLAESFKSF----EPDSVVHFGEQRSAPY-SMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYG 160 (404)
T ss_dssp TSHHHHHHHHHHH----CCSEEEECCSCCCHHH-HTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGC
T ss_pred CCHHHHHHHHhcc----CCCEEEECCCCCCccc-hhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHhC
Confidence 9999999888765 6999999999754322 223677888999999999999999886642 114899999975431
Q ss_pred ------------------------CCCCChhHHHHHHHHHHHHHHHHH-cCCCeEEEEccccC
Q psy1119 924 ------------------------GNAGQTNYGMANSIMERICEARRA-EGLPGLAVEWGAVG 961 (1392)
Q Consensus 924 ------------------------G~~gq~~Yaaana~ld~la~~r~~-~Glp~~ai~~g~~~ 961 (1392)
+....+.|+++|.+.+.+++..+. .|++...+..|.+-
T Consensus 161 ~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~ 223 (404)
T 1i24_A 161 TPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVY 223 (404)
T ss_dssp CCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE
T ss_pred CCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceee
Confidence 122357899999999999886544 49999988887653
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.36 E-value=3.6e-12 Score=149.98 Aligned_cols=162 Identities=20% Similarity=0.226 Sum_probs=125.0
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCC------ceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGA------RKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNL 852 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GA------r~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l 852 (1392)
..++++|||||+|+||.++++.|+++|. .+|++++|+...... ..+.++.++.+|++|.++++++
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~ 82 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---------GFSGAVDARAADLSAPGEAEKL 82 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---------TCCSEEEEEECCTTSTTHHHHH
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---------ccCCceeEEEcCCCCHHHHHHH
Confidence 3567899999999999999999999993 348888887532211 1345788899999999998887
Q ss_pred HHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccCC-C--
Q psy1119 853 LTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRGN-A-- 926 (1392)
Q Consensus 853 ~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G~-~-- 926 (1392)
++ +.+|.|||+|+...+ .+.++|...+++|+.|+.++.+++..... ..+.||++||.+..-+. +
T Consensus 83 ~~-----~~~d~vih~A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~ 152 (342)
T 2hrz_A 83 VE-----ARPDVIFHLAAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYP 152 (342)
T ss_dssp HH-----TCCSEEEECCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSS
T ss_pred Hh-----cCCCEEEECCccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCC
Confidence 75 479999999997531 34577899999999999999988865421 14789999999654332 2
Q ss_pred --------CChhHHHHHHHHHHHHHHHHHc-CCCeEEEEccc
Q psy1119 927 --------GQTNYGMANSIMERICEARRAE-GLPGLAVEWGA 959 (1392)
Q Consensus 927 --------gq~~Yaaana~ld~la~~r~~~-Glp~~ai~~g~ 959 (1392)
....|+++|.+.+.+++....+ |++...+....
T Consensus 153 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~ 194 (342)
T 2hrz_A 153 IPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPT 194 (342)
T ss_dssp BCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECE
T ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeee
Confidence 5789999999999999887665 67766665443
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1e-11 Score=145.86 Aligned_cols=163 Identities=15% Similarity=0.142 Sum_probs=119.1
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
++|||||+|+||.++++.|+++|++ |++++|...........++.+ .+.++.++.+|++|+++++++++.. ++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~-V~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~----~~ 74 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHD-VIILDNLCNSKRSVLPVIERL--GGKHPTFVEGDIRNEALMTEILHDH----AI 74 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCTTHHHHHHHH--HTSCCEEEECCTTCHHHHHHHHHHT----TC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCE-EEEEecCCCcchhHHHHHHhh--cCCcceEEEccCCCHHHHHHHhhcc----CC
Confidence 5899999999999999999999997 666665432222121222222 1445677899999999998887652 69
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccC------------CCCChh
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRG------------NAGQTN 930 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G------------~~gq~~ 930 (1392)
|+|||+||...... +.+++...+++|+.|+.++.+++... ..+.||++||.+..-. .++...
T Consensus 75 D~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~ 148 (338)
T 1udb_A 75 DTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMRAA--NVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSP 148 (338)
T ss_dssp SEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSH
T ss_pred CEEEECCccCcccc----chhcHHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccHHHhCCCCCCCcCcccCCCCCCCh
Confidence 99999999643211 23456778999999999998887653 4578999999764311 134789
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCeEEEEcc
Q psy1119 931 YGMANSIMERICEARRAE--GLPGLAVEWG 958 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~--Glp~~ai~~g 958 (1392)
|+++|++++.+++..+.+ |++.+.+..+
T Consensus 149 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~ 178 (338)
T 1udb_A 149 YGKSKLMVEQILTDLQKAQPDWSIALLRYF 178 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceEEEeec
Confidence 999999999999887654 6887777653
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=8.3e-12 Score=146.33 Aligned_cols=167 Identities=16% Similarity=0.074 Sum_probs=124.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
+++++|||||+|+||.++++.|+++|++ |+.++|+...... ..++.+. .+..+.++.+|++|.+++.++++.+
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~--~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--- 85 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYR-VHGLVARRSSDTR--WRLRELG-IEGDIQYEDGDMADACSVQRAVIKA--- 85 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCCSSCCC--HHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH---
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCCccccc--cchhhcc-ccCceEEEECCCCCHHHHHHHHHHc---
Confidence 5688999999999999999999999986 7778887543211 1122221 2345778899999999999988775
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC-CCeEEEecccccccCCCC-----------
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT-LGQFVVFSSVSCGRGNAG----------- 927 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~-l~~fV~~SS~s~~~G~~g----------- 927 (1392)
++|.|||+|+..... .+.+++...+++|+.|+.++.+++... . ...||++||.+..-+..+
T Consensus 86 -~~d~Vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p 158 (335)
T 1rpn_A 86 -QPQEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQF--SPETRFYQASTSEMFGLIQAERQDENTPFYP 158 (335)
T ss_dssp -CCSEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHH--CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred -CCCEEEECccccchh----hhhhChHHHHHHHHHHHHHHHHHHHHh--CCCCeEEEEeCHHHhCCCCCCCCCcccCCCC
Confidence 689999999964321 112356788999999999999988664 3 379999999765433222
Q ss_pred ChhHHHHHHHHHHHHHHHHHc-CCCeEEEEcccc
Q psy1119 928 QTNYGMANSIMERICEARRAE-GLPGLAVEWGAV 960 (1392)
Q Consensus 928 q~~Yaaana~ld~la~~r~~~-Glp~~ai~~g~~ 960 (1392)
...|+++|.+.+.+++....+ |++.+.+..+.+
T Consensus 159 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v 192 (335)
T 1rpn_A 159 RSPYGVAKLYGHWITVNYRESFGLHASSGILFNH 192 (335)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE
T ss_pred CChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcc
Confidence 468999999999999876554 899877765543
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.35 E-value=6e-12 Score=147.89 Aligned_cols=156 Identities=17% Similarity=0.188 Sum_probs=117.5
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
.+++||||+|+||.++++.|+++|++ |+.++|+..... .+... .+.++.+|++|.+++.++++ .
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~-------~l~~~--~~~~~~~Dl~d~~~~~~~~~------~ 77 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHD-LVLIHRPSSQIQ-------RLAYL--EPECRVAEMLDHAGLERALR------G 77 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECTTSCGG-------GGGGG--CCEEEECCTTCHHHHHHHTT------T
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCE-EEEEecChHhhh-------hhccC--CeEEEEecCCCHHHHHHHHc------C
Confidence 47999999999999999999999986 788888754321 12222 35678999999998887664 5
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC--------------
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG-------------- 927 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g-------------- 927 (1392)
+|.|||+|+... .+.+++...+++|+.|+.++.+++.+. ..+.||++||.+...+..+
T Consensus 78 ~d~vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~ 149 (342)
T 2x4g_A 78 LDGVIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQA--RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP 149 (342)
T ss_dssp CSEEEEC------------------CHHHHHHHHHHHHHHHHHHH--TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCC
T ss_pred CCEEEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccc
Confidence 899999999643 245678889999999999999988764 4578999999887655554
Q ss_pred --ChhHHHHHHHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 928 --QTNYGMANSIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 928 --q~~Yaaana~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
...|+.+|.+.+.+++..+..|++...+..|.+-
T Consensus 150 ~~~~~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~ 185 (342)
T 2x4g_A 150 SGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVL 185 (342)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEE
T ss_pred cccChHHHHHHHHHHHHHHHhhcCCcEEEEeCCceE
Confidence 7899999999999998765559999999888753
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.35 E-value=2e-12 Score=146.68 Aligned_cols=150 Identities=17% Similarity=0.197 Sum_probs=121.1
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
+++|||||+|+||.++++.|+++|++ |++++|+..... .. .+.++.+|++|.+++.++++ .
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~----------~~--~~~~~~~Dl~d~~~~~~~~~------~ 63 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHE-VRLSDIVDLGAA----------EA--HEEIVACDLADAQAVHDLVK------D 63 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEE-EEECCSSCCCCC----------CT--TEEECCCCTTCHHHHHHHHT------T
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCE-EEEEeCCCcccc----------CC--CccEEEccCCCHHHHHHHHc------C
Confidence 47999999999999999999999975 888899854211 12 35778999999998887765 5
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC------------CCh
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA------------GQT 929 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~------------gq~ 929 (1392)
+|.|||+|+... .++|...+++|+.|+.++.+++... ..+.||++||.+...+.+ ...
T Consensus 64 ~d~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~ 133 (267)
T 3ay3_A 64 CDGIIHLGGVSV--------ERPWNDILQANIIGAYNLYEAARNL--GKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDS 133 (267)
T ss_dssp CSEEEECCSCCS--------CCCHHHHHHHTHHHHHHHHHHHHHT--TCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCS
T ss_pred CCEEEECCcCCC--------CCCHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCC
Confidence 899999999752 2456788999999999999988653 457999999987654433 247
Q ss_pred hHHHHHHHHHHHHHHHH-HcCCCeEEEEcccc
Q psy1119 930 NYGMANSIMERICEARR-AEGLPGLAVEWGAV 960 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~ 960 (1392)
.|+++|.+++.+++... ..|++...+..|.+
T Consensus 134 ~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v 165 (267)
T 3ay3_A 134 LYGLSKCFGEDLASLYYHKFDIETLNIRIGSC 165 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCEEEEEECBC
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCEEEEeceee
Confidence 99999999999998754 45899999998886
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.34 E-value=5.9e-12 Score=150.18 Aligned_cols=168 Identities=17% Similarity=0.061 Sum_probs=122.3
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCccc--HHHHHHHHHHhc-CCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKN--GYQALRIKIWKS-YDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~--~~~~~~~~~l~~-~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
+++|||||+|+||.++++.|+++|++ |++++|+.... .......+.+.. .+..+.++.+|++|.+++.++++.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 101 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYE-VHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-- 101 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCE-EEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc--
Confidence 68999999999999999999999986 77778875321 000000000000 2345778899999999999988875
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCC-----------C
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGN-----------A 926 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~-----------~ 926 (1392)
++|.|||+|+..... .+.+++...+++|+.|+.++.+++..... ..+.||++||.+..-+. .
T Consensus 102 --~~d~vih~A~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~ 175 (375)
T 1t2a_A 102 --KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFY 175 (375)
T ss_dssp --CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCC
T ss_pred --CCCEEEECCCccccc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCC
Confidence 689999999964321 23567889999999999999998866421 12799999998765322 2
Q ss_pred CChhHHHHHHHHHHHHHHHHHc-CCCeEEEEcc
Q psy1119 927 GQTNYGMANSIMERICEARRAE-GLPGLAVEWG 958 (1392)
Q Consensus 927 gq~~Yaaana~ld~la~~r~~~-Glp~~ai~~g 958 (1392)
....|+++|++++.+++..+.+ |++.+.+...
T Consensus 176 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~ 208 (375)
T 1t2a_A 176 PRSPYGAAKLYAYWIVVNFREAYNLFAVNGILF 208 (375)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred CCChhHHHHHHHHHHHHHHHHHhCCCEEEEecc
Confidence 4678999999999999876655 8887665543
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.4e-12 Score=141.53 Aligned_cols=145 Identities=15% Similarity=0.141 Sum_probs=118.7
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCC-HHHHHHHHHHHhhcCC
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITT-EAGVVNLLTEANKLGP 861 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~-~~~v~~l~~~~~~~g~ 861 (1392)
+++||||+|+||+++++.|+++|++ |++++|+..... .. ..+.++.+|++| .++++++++ .
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~----------~~-~~~~~~~~D~~d~~~~~~~~~~------~ 63 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQ-IYAGARKVEQVP----------QY-NNVKAVHFDVDWTPEEMAKQLH------G 63 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCE-EEEEESSGGGSC----------CC-TTEEEEECCTTSCHHHHHTTTT------T
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCccchh----------hc-CCceEEEecccCCHHHHHHHHc------C
Confidence 5899999999999999999999986 888889853221 11 357889999999 888876654 6
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC-------ChhHHHH
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG-------QTNYGMA 934 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g-------q~~Yaaa 934 (1392)
+|.|||+||...+. .++.++.|+.++.++++.. ..+.||++||+.+..+.+. ...|+++
T Consensus 64 ~d~vi~~ag~~~~~------------~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~s 129 (219)
T 3dqp_A 64 MDAIINVSGSGGKS------------LLKVDLYGAVKLMQAAEKA--EVKRFILLSTIFSLQPEKWIGAGFDALKDYYIA 129 (219)
T ss_dssp CSEEEECCCCTTSS------------CCCCCCHHHHHHHHHHHHT--TCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHH
T ss_pred CCEEEECCcCCCCC------------cEeEeHHHHHHHHHHHHHh--CCCEEEEECcccccCCCcccccccccccHHHHH
Confidence 99999999986522 6778899999999888653 4579999999888776666 7899999
Q ss_pred HHHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 935 NSIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 935 na~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
|.+++.+++ +..|++...+..|.+-
T Consensus 130 K~~~e~~~~--~~~~i~~~ilrp~~v~ 154 (219)
T 3dqp_A 130 KHFADLYLT--KETNLDYTIIQPGALT 154 (219)
T ss_dssp HHHHHHHHH--HSCCCEEEEEEECSEE
T ss_pred HHHHHHHHH--hccCCcEEEEeCceEe
Confidence 999999987 5679999999988764
|
| >3kg8_A CURJ; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.45A {Lyngbya majuscula} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.3e-11 Score=143.33 Aligned_cols=242 Identities=17% Similarity=0.216 Sum_probs=159.1
Q ss_pred eeeeeeccCCCCceeEeeccccCCCCcccccccchh-hHH----HHHHHHHHHHHHHcCCCCccCCEEeeeeeeeeeeee
Q psy1119 22 IGTLLKEAPRKGLVQLKNSFRSLSASPKRLASTALD-RVY----QRFQMAWETVSLMRGELYTEVPVVFENIKFMRATNV 96 (1392)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gh~id-r~l----~yl~l~W~t~a~~~~~~~~~~pv~fe~v~~~rat~l 96 (1392)
+|..... +...+..+..-++ .++.-||.||+|+ +++ |||.++++......+. -++.++||.|+++.++
T Consensus 12 LG~~~~~-~~~~~~~w~~~l~--~~~~pwL~dH~v~g~~v~Pga~ylema~~A~~~~~~~----~~~~l~dv~~~~pL~l 84 (308)
T 3kg8_A 12 INQKFQS-PLSKEIFFESYFS--TENLPFLADHIVYEQVVVPGASHISLLLAAASLTFAA----TECQIEDILFPQALAI 84 (308)
T ss_dssp BSEEECC-TTCSSEEEEEEEC--TTTSGGGGGEEETTEEEECHHHHHHHHHHHHHHHCSS----SCEEEEEEECCSCEEE
T ss_pred CCCcccC-CCCCCcEEEEEEC--CCCCChhhcCEECCEEEEcHHHHHHHHHHHHHHhcCC----CcEEEEEEEEeeeeec
Confidence 4444333 2334455887777 4554599999999 777 9999999998887653 4799999999999999
Q ss_pred CCCCeEEEEEEEEe--ccccEEEeeC--------------------CcEEEEEEEEccCCcccccccCCCCCCCCCCCcc
Q psy1119 97 PKEGSVEFIVMVQK--GSGNFEIVEG--------------------GAAIVTGKVYIPADVKTEMVRIPDQYKIPRTEGE 154 (1392)
Q Consensus 97 ~~~~~v~~~v~i~~--~sg~Fei~~~--------------------~~~vvsG~i~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (1392)
+.++.+++.+.+.+ ++..|+|..- -..-++|+|........ ...+.. .....
T Consensus 85 ~~~~~~~v~~~l~~~~~~~~f~i~s~~~~~~~~~~~~~~~~~~~~~w~~ha~G~v~~~~~~~~-~~~~~~-----~~~~~ 158 (308)
T 3kg8_A 85 PEQGVRTVQVVLTPQNNSFSFQVISFDDSLESQINQVSNNGSHISDWAVHATGKLSVANAEQS-LIPLEE-----IQARC 158 (308)
T ss_dssp CTTCCEEEEEEEEEETTEEEEEEEEECCCC------------CCCCCEEEEEEEEEECCCCC----CHHH-----HHHHC
T ss_pred CCCCCEEEEEEEEcCCCceEEEEEEcccccccccccccccCcCCCCcEEEEEEEEEecCCCCC-cCCHHH-----HHHhC
Confidence 99876666666655 3458998652 34678999986432211 000000 00111
Q ss_pred cccCChhhHHHHHHhcCCccCccccceeeeccC--CceeEEEeccc---------chhhhhhhhheeccccC-----CCc
Q psy1119 155 AIELQSRDIYKELRLRGYHYKGLFRSLNVADGA--GTQGKIRWHNN---------WVAFMDNMLQLQILQYD-----TRG 218 (1392)
Q Consensus 155 ~~~l~~~diYkel~lrGy~y~~~F~~i~~~~~~--g~~g~i~W~~n---------Wv~f~d~mlQ~~il~~~-----~~~ 218 (1392)
...++.+++|+.|+.+||+||+.||+|++.... ...|+|.+... .-++||++||..+.... ...
T Consensus 159 ~~~~~~~~~Y~~l~~~G~~yGp~Fr~l~~i~~~~~~~~a~v~lp~~~~~~~~~~lHP~lLD~~lq~~~~~~~~~~~~~~~ 238 (308)
T 3kg8_A 159 SQKIDSAEIYQHLWDRQIHLGQSFRWIEQVWLGEGEVLCQMKVPKTILNTTKYQLHPTLVDSCFQSIIALVLDQSGNKNE 238 (308)
T ss_dssp CEEECTHHHHHHHHHTTEEECGGGCCEEEEEECSSEEEEEEECCTTCCCGGGCSSCHHHHHHHHHGGGGGSTTCCSCTTC
T ss_pred CCcCCHHHHHHHHHHhccccChhhhhhHheEECCCeEEEEEEcCcccccCCCceeChHHHHHHHHHHHHhcccccCCCCc
Confidence 125889999999999999999999999988553 34577887653 46799999999876432 356
Q ss_pred eecccceeeEEEcchhhHh----hhh--ccCCCCC--eeeEEEecccCcEEeccEEEeceeeeccCCCC
Q psy1119 219 LFVPTSIQKLVINVSDHVN----LLS--TLDEETP--EYPVFVYKEVEVIKSGGVEIRGLKASAIPRKK 279 (1392)
Q Consensus 219 l~~Pt~i~~~~i~p~~h~~----~~~--~~~~~~~--~~~v~~~~~~~~~~~ggvei~gl~~~~~~rr~ 279 (1392)
++||+.|++|.|....-.. ++. ....... ..++.++..-+.+. ++|.|++...++++.
T Consensus 239 ~~vP~~i~~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~di~l~d~~G~~~---~~i~gl~~~~~~~~~ 304 (308)
T 3kg8_A 239 TFVPFSIDKFTFYNSSDNDLLWCYTCGSKDKQSGEKFKADIQLFDQHGQLV---AQVIGFEGRKANPKI 304 (308)
T ss_dssp EEEEEEEEEEEECCCCCCSEEEEEEEEEECSSCTTEEEEEEEEECTTSCEE---EEEEEEEEEEECGGG
T ss_pred eEeEEEEeEEEEEccCCCCcEEEEEEEccCCCCCCcEEEEEEEECCCCCEE---EEEeCeEEEEcCHHH
Confidence 9999999999986432111 000 0000111 23444443322222 577888877776654
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=9.7e-12 Score=146.81 Aligned_cols=167 Identities=14% Similarity=0.092 Sum_probs=127.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCC-----ceEEEEeccCCCHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYD-----VQVLISTDDITTEAGVVNLL 853 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G-----~~v~~~~~Dv~~~~~v~~l~ 853 (1392)
..++++|||||+|.||.++++.|+++|.+ |+.++|+......... .+.... ..+.++.+|++|.+++.+++
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 98 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQV-VIGLDNFSTGHQYNLD---EVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM 98 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCHHHHH---HHHHTSCHHHHTTEEEEECCTTCHHHHHHHT
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCCCCchhhhh---hhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence 35789999999999999999999999986 7778887654433322 222211 35778899999999888776
Q ss_pred HHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC------
Q psy1119 854 TEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG------ 927 (1392)
Q Consensus 854 ~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g------ 927 (1392)
+ .+|.|||+|+.... ..+.+++...+++|+.|+.+|.+++... ....||++||.+..-...+
T Consensus 99 ~------~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~v~~SS~~vyg~~~~~~~~E~ 166 (351)
T 3ruf_A 99 K------GVDHVLHQAALGSV----PRSIVDPITTNATNITGFLNILHAAKNA--QVQSFTYAASSSTYGDHPALPKVEE 166 (351)
T ss_dssp T------TCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTCCCSSBCTT
T ss_pred c------CCCEEEECCccCCc----chhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEecHHhcCCCCCCCCccC
Confidence 5 69999999996432 2234567788999999999999988654 4579999999866533332
Q ss_pred -----ChhHHHHHHHHHHHHHHHHH-cCCCeEEEEccccC
Q psy1119 928 -----QTNYGMANSIMERICEARRA-EGLPGLAVEWGAVG 961 (1392)
Q Consensus 928 -----q~~Yaaana~ld~la~~r~~-~Glp~~ai~~g~~~ 961 (1392)
...|+.+|...+.+++.... .|++.+.+..+.+-
T Consensus 167 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~ 206 (351)
T 3ruf_A 167 NIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVF 206 (351)
T ss_dssp CCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEE
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCcee
Confidence 47899999999999987554 49999988887653
|
| >3kg9_A CURK; polyketide synthase, double hotdog fold, dehydratase, lyase; 1.70A {Lyngbya majuscula} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.2e-11 Score=142.53 Aligned_cols=234 Identities=16% Similarity=0.221 Sum_probs=157.8
Q ss_pred CceeEeeccccCCCCcccccccchh-hHH----HHHHHHHHHHHHHcCCCCccCCEEeeeeeeeeeeeeCCCCeEEEEEE
Q psy1119 33 GLVQLKNSFRSLSASPKRLASTALD-RVY----QRFQMAWETVSLMRGELYTEVPVVFENIKFMRATNVPKEGSVEFIVM 107 (1392)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~l~gh~id-r~l----~yl~l~W~t~a~~~~~~~~~~pv~fe~v~~~rat~l~~~~~v~~~v~ 107 (1392)
....+...++ .++.-||.||+|+ +++ |||.++.+......+. .-.+.++||.|+++..++.++.+++.+.
T Consensus 23 ~~~~w~~~l~--~~~~pwL~dH~v~g~~v~Pga~ylema~~A~~~~~~~---~~~~~l~dv~~~~pl~l~~~~~~~v~~~ 97 (296)
T 3kg9_A 23 NQHHFQSYLT--AESPAYLSQHQVFNKVLFPATGYLEIAAAVGKNLLTT---GEQVVVSDVTIVRGLVIPETDIKTVQTV 97 (296)
T ss_dssp SEEEEEEEEE--TTBSGGGGGEEETTEEBCCHHHHHHHHHHHHHHSCCS---SCEEEEEEEEECSCCBCCTTCEEEEEEE
T ss_pred CceEEEEEEC--CCCCchhHhCEECCEEEehHHHHHHHHHHHHHHhcCC---CCcEEEEEEEeccceEcCCCCcEEEEEE
Confidence 4667888888 4554599999999 777 9999999997775442 1248999999999999999888888888
Q ss_pred EEec---cccEEEeeC----------CcEEEEEEEEccCCccc-ccccCCCCCCCCCCCcccccCChhhHHHHHHhcCCc
Q psy1119 108 VQKG---SGNFEIVEG----------GAAIVTGKVYIPADVKT-EMVRIPDQYKIPRTEGEAIELQSRDIYKELRLRGYH 173 (1392)
Q Consensus 108 i~~~---sg~Fei~~~----------~~~vvsG~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~diYkel~lrGy~ 173 (1392)
+.+. ...|+|.-. -..-++|+|........ ....+.. ........++.+++|+.|+-+||+
T Consensus 98 l~~~~~~~~~f~i~S~~~~~~~~~~~w~~h~~G~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~Y~~~~~~Gl~ 172 (296)
T 3kg9_A 98 ISTLENNSYKLEIFSTSEGDNQQANQWTLHAEGKIFLDSTTNTKAKIDLEQ-----YQRECSQVIDIQQHYQQFKSRGID 172 (296)
T ss_dssp EEEEETTEEEEEEEEEEC-----CCCCEEEEEEEEEEECSCCCCCCCCHHH-----HHHHCCEECCHHHHHHHHHHHTEE
T ss_pred EEcCCCCeEEEEEEEccCCCCCCCCceEEEEEEEEEecCCCCCcCccCHHH-----HHHhCCCcCCHHHHHHHHHHhcCc
Confidence 8764 347888653 25688999986432110 1000000 000111258999999999999999
Q ss_pred cCccccceeeeccC--CceeEEEecccc----------hhhhhhhhheecccc----CCCceecccceeeEEEcchhhHh
Q psy1119 174 YKGLFRSLNVADGA--GTQGKIRWHNNW----------VAFMDNMLQLQILQY----DTRGLFVPTSIQKLVINVSDHVN 237 (1392)
Q Consensus 174 y~~~F~~i~~~~~~--g~~g~i~W~~nW----------v~f~d~mlQ~~il~~----~~~~l~~Pt~i~~~~i~p~~h~~ 237 (1392)
||+.||+|.+.... ...|+|...... -++||++||..++.. .....+||+.|+++.|....-..
T Consensus 173 yGp~f~~l~~~~~~~~~~~a~v~lp~~~~~~~~~~~lhP~lLD~~lq~~~~~~~~~~~~~~~~vP~~i~~l~i~~~~~~~ 252 (296)
T 3kg9_A 173 YGNSFQGIKQLWKGQGKALGKIALPEEIAGQATDYQLHPALLDAALQILGHAIGNTETDDKAYLPVGIDKLKQYRQTITQ 252 (296)
T ss_dssp ECGGGCCEEEEEECSSEEEEEEECCTTTGGGGGGCSSCHHHHHHHHTTHHHHHTCTTTCCCEEEEEEEEEEEECSSCCSE
T ss_pred cchhhhhhHhheECCCEEEEEEECChhHhccccCceeCHHHHHHHHHHHHHhcccccCCCcEEEEEEEeEEEEEcCCCCc
Confidence 99999999988554 345678776543 468999999876543 23478999999999986432000
Q ss_pred -hh-hccCCCCCeeeEEEecccCcEEeccEEEeceeeeccCCCC
Q psy1119 238 -LL-STLDEETPEYPVFVYKEVEVIKSGGVEIRGLKASAIPRKK 279 (1392)
Q Consensus 238 -~~-~~~~~~~~~~~v~~~~~~~~~~~ggvei~gl~~~~~~rr~ 279 (1392)
.+ -+...+....++.++..-+.+. ++|.|++...++|+.
T Consensus 253 ~~~~~~~~~~~~~~di~l~d~~G~~~---~~i~gl~~~~~~~~~ 293 (296)
T 3kg9_A 253 VWAIVEIPENTLKGSIKLVDNQGSLL---AEIEGLRVTATTADA 293 (296)
T ss_dssp EEEEEECCTTCSSEEEEEECTTCCEE---EEEEEEEEEEECSCC
T ss_pred EEEEEEECCCcEEEEEEEECCCCCEE---EEEecEEEEEcCHHH
Confidence 00 0111112234455443322222 588888888888764
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.32 E-value=5e-12 Score=148.42 Aligned_cols=165 Identities=16% Similarity=0.161 Sum_probs=121.6
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHh-cCCceEEEE-eccCCCHHHHHHHHHH
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK-SYDVQVLIS-TDDITTEAGVVNLLTE 855 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~-~~G~~v~~~-~~Dv~~~~~v~~l~~~ 855 (1392)
+.+++++|||||+|+||.++++.|+++|++ |++++|+..... ...+.++ ..+.++.++ .+|++|.++++++++
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~- 82 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYK-VRGTARSASKLA---NLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK- 82 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSHHHHH---HHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCE-EEEEeCCcccHH---HHHHHhhccCCCceEEEEecCCcChHHHHHHHc-
Confidence 346789999999999999999999999996 888888743221 1122221 123457777 899999887765543
Q ss_pred HhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc-CCC--------
Q psy1119 856 ANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR-GNA-------- 926 (1392)
Q Consensus 856 ~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~-G~~-------- 926 (1392)
.+|.|||+|+..... +++...+++|+.|+.++.+++.+. ...+.||++||.++.. +.+
T Consensus 83 -----~~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~~~~~~ 149 (342)
T 1y1p_A 83 -----GAAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVSALIPKPNVEGIYLD 149 (342)
T ss_dssp -----TCSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGGTCCCCTTCCCCEEC
T ss_pred -----CCCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHhC-CCCcEEEEeccHHHhcCCCCCCCCcccC
Confidence 699999999975432 246788999999999999987642 2457999999987753 211
Q ss_pred ----------------------CChhHHHHHHHHHHHHHHHHHc---CCCeEEEEcccc
Q psy1119 927 ----------------------GQTNYGMANSIMERICEARRAE---GLPGLAVEWGAV 960 (1392)
Q Consensus 927 ----------------------gq~~Yaaana~ld~la~~r~~~---Glp~~ai~~g~~ 960 (1392)
....|+++|.+.+.+++..+.+ |++...+..+.+
T Consensus 150 E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v 208 (342)
T 1y1p_A 150 EKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYT 208 (342)
T ss_dssp TTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEE
T ss_pred ccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCce
Confidence 2368999999999999876654 666777776654
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.32 E-value=6.4e-12 Score=147.32 Aligned_cols=164 Identities=14% Similarity=0.125 Sum_probs=123.5
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhC--CceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRG--ARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~G--Ar~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.++|||||+|+||.++++.|+++| ++ |+.++|+....... .++.+.. +..+.++.+|++|.+++++++
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~-V~~~~r~~~~~~~~--~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~------ 73 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWE-VINIDKLGYGSNPA--NLKDLED-DPRYTFVKGDVADYELVKELV------ 73 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCE-EEEEECCCTTCCGG--GGTTTTT-CTTEEEEECCTTCHHHHHHHH------
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCE-EEEEecCcccCchh--HHhhhcc-CCceEEEEcCCCCHHHHHHHh------
Confidence 469999999999999999999997 55 77778763211100 1111211 346788899999999988877
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc-----------CCCCC
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR-----------GNAGQ 928 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~-----------G~~gq 928 (1392)
+.+|.|||+|+.... +.+.+++...+++|+.|+.++.+++.+. ...+.||++||.+..- +....
T Consensus 74 ~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~ 148 (336)
T 2hun_A 74 RKVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE-NPEVRFVHVSTDEVYGDILKGSFTENDRLMPS 148 (336)
T ss_dssp HTCSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCC
T ss_pred hCCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEeccHHHHCCCCCCCcCCCCCCCCC
Confidence 379999999997531 2345678889999999999999988765 2236999999976431 23456
Q ss_pred hhHHHHHHHHHHHHHHHHH-cCCCeEEEEcccc
Q psy1119 929 TNYGMANSIMERICEARRA-EGLPGLAVEWGAV 960 (1392)
Q Consensus 929 ~~Yaaana~ld~la~~r~~-~Glp~~ai~~g~~ 960 (1392)
..|+++|.+.+.+++..+. .|++...+..+.+
T Consensus 149 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v 181 (336)
T 2hun_A 149 SPYSATKAASDMLVLGWTRTYNLNASITRCTNN 181 (336)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEE
T ss_pred CccHHHHHHHHHHHHHHHHHhCCCEEEEeeeee
Confidence 7999999999999987654 4899888888765
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=9.6e-12 Score=146.01 Aligned_cols=168 Identities=15% Similarity=0.119 Sum_probs=121.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.++++|||||+|+||.++++.|+++|++ |+.+.|+.......... ..+...+.++.++.+|++|.+++.++++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYT-VRATVRDPTNVKKVKHL-LDLPKAETHLTLWKADLADEGSFDEAIK----- 76 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCTTCHHHHHHH-HTSTTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCE-EEEEECCcchhHHHHHH-HhcccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence 4578999999999999999999999997 77677875322111111 1111112357788999999988877764
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC-------------
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA------------- 926 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~------------- 926 (1392)
.+|+|||+|+... +... +.++..+++|+.|+.++.+++.... ..+.||++||.++..|.+
T Consensus 77 -~~d~Vih~A~~~~---~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~-~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~ 149 (337)
T 2c29_D 77 -GCTGVFHVATPMD---FESK--DPENEVIKPTIEGMLGIMKSCAAAK-TVRRLVFTSSAGTVNIQEHQLPVYDESCWSD 149 (337)
T ss_dssp -TCSEEEECCCCCC---SSCS--SHHHHTHHHHHHHHHHHHHHHHHHS-CCCEEEEECCGGGTSCSSSCCSEECTTCCCC
T ss_pred -CCCEEEEeccccC---CCCC--ChHHHHHHHHHHHHHHHHHHHHhCC-CccEEEEeeeHhhcccCCCCCcccCcccCCc
Confidence 4799999998541 2222 2345788999999999999886642 257999999998665432
Q ss_pred ---------CChhHHHHHHHHHHHHHHHH-HcCCCeEEEEccccC
Q psy1119 927 ---------GQTNYGMANSIMERICEARR-AEGLPGLAVEWGAVG 961 (1392)
Q Consensus 927 ---------gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~~ 961 (1392)
....|+++|.+.+.++.... ..|++...+..+.+-
T Consensus 150 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~ 194 (337)
T 2c29_D 150 MEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVV 194 (337)
T ss_dssp HHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEE
T ss_pred hhhhcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceE
Confidence 23469999999999987654 459999988887653
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.32 E-value=6.3e-12 Score=138.75 Aligned_cols=150 Identities=11% Similarity=0.022 Sum_probs=120.1
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
++++||||+|+||+++++.|+++|.+ |++++|+..... .....+.++.+|++|.++++++++ .
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~----------~~~~~~~~~~~Dl~d~~~~~~~~~------~ 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFE-VTAVVRHPEKIK----------IENEHLKVKKADVSSLDEVCEVCK------G 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCE-EEEECSCGGGCC----------CCCTTEEEECCCTTCHHHHHHHHT------T
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCE-EEEEEcCcccch----------hccCceEEEEecCCCHHHHHHHhc------C
Confidence 68999999999999999999999986 888899853321 112457889999999999988775 5
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC----------ChhH
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG----------QTNY 931 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g----------q~~Y 931 (1392)
+|.|||+||...+. ...++.++.++.++.+++... ....||++||.++..+.++ ...|
T Consensus 68 ~d~vi~~a~~~~~~----------~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y 135 (227)
T 3dhn_A 68 ADAVISAFNPGWNN----------PDIYDETIKVYLTIIDGVKKA--GVNRFLMVGGAGSLFIAPGLRLMDSGEVPENIL 135 (227)
T ss_dssp CSEEEECCCC----------------CCSHHHHHHHHHHHHHHHT--TCSEEEEECCSTTSEEETTEEGGGTTCSCGGGH
T ss_pred CCEEEEeCcCCCCC----------hhHHHHHHHHHHHHHHHHHHh--CCCEEEEeCChhhccCCCCCccccCCcchHHHH
Confidence 89999999864221 136788999999999988654 4569999999987766554 6889
Q ss_pred HHHHHHHHHHHHHHH-HcCCCeEEEEcccc
Q psy1119 932 GMANSIMERICEARR-AEGLPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~r~-~~Glp~~ai~~g~~ 960 (1392)
+.+|...+.+++..+ ..|++...+..|.+
T Consensus 136 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v 165 (227)
T 3dhn_A 136 PGVKALGEFYLNFLMKEKEIDWVFFSPAAD 165 (227)
T ss_dssp HHHHHHHHHHHHTGGGCCSSEEEEEECCSE
T ss_pred HHHHHHHHHHHHHHhhccCccEEEEeCCcc
Confidence 999999999988877 66899999988874
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=4e-12 Score=142.34 Aligned_cols=159 Identities=14% Similarity=0.004 Sum_probs=120.2
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHh--CCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLR--GARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~--GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
.++++||||+|+||+++++.|+++ |++ |++++|+... .+.+ +..+.++.+|++|.++++++++
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~-V~~~~r~~~~-------~~~~---~~~~~~~~~D~~d~~~~~~~~~---- 68 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFV-AKGLVRSAQG-------KEKI---GGEADVFIGDITDADSINPAFQ---- 68 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTTCE-EEEEESCHHH-------HHHT---TCCTTEEECCTTSHHHHHHHHT----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCCCcE-EEEEEcCCCc-------hhhc---CCCeeEEEecCCCHHHHHHHHc----
Confidence 578999999999999999999999 675 8888887311 1122 3345678899999999888775
Q ss_pred cCCccEEEECcccCCCccc---------cCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCC-
Q psy1119 859 LGPVDGIFNLAVVLKDALF---------ENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQ- 928 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~---------~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq- 928 (1392)
.+|.|||+||....... .+.+.++|.+.++.|+.++.++.+++... ..+.||++||.++.......
T Consensus 69 --~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~ 144 (253)
T 1xq6_A 69 --GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA--GVKHIVVVGSMGGTNPDHPLN 144 (253)
T ss_dssp --TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH--TCSEEEEEEETTTTCTTCGGG
T ss_pred --CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc--CCCEEEEEcCccCCCCCCccc
Confidence 58999999997543211 22233455667889999999999888654 45799999999876544333
Q ss_pred ----hhHHHHHHHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 929 ----TNYGMANSIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 929 ----~~Yaaana~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
+.|+.+|.+++.+++. .|++...+..|.+-
T Consensus 145 ~~~~~~y~~sK~~~e~~~~~---~~i~~~~vrpg~v~ 178 (253)
T 1xq6_A 145 KLGNGNILVWKRKAEQYLAD---SGTPYTIIRAGGLL 178 (253)
T ss_dssp GGGGCCHHHHHHHHHHHHHT---SSSCEEEEEECEEE
T ss_pred cccchhHHHHHHHHHHHHHh---CCCceEEEecceee
Confidence 3477799999998863 79999999988764
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=5.5e-12 Score=149.44 Aligned_cols=167 Identities=15% Similarity=0.162 Sum_probs=124.8
Q ss_pred eEEEEcCcchHHHHHHHHHHHh-CCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 783 SYIICGGLGGFGLELADWLVLR-GARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~-GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
.+|||||+|+||.++++.|+++ |++ |+.++|+....... .++.+.. +.++.++.+|++|.+++.+++++ ++
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~~--~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~----~~ 73 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDT-VVNIDKLTYAGNLE--SLSDISE-SNRYNFEHADICDSAEITRIFEQ----YQ 73 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCE-EEEEECCCTTCCGG--GGTTTTT-CTTEEEEECCTTCHHHHHHHHHH----HC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCe-EEEEecCCCCCchh--hhhhhhc-CCCeEEEECCCCCHHHHHHHHhh----cC
Confidence 4899999999999999999998 676 77778764211100 1111211 34678889999999999988875 27
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCC-------CeEEEecccccc--cC--------
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTL-------GQFVVFSSVSCG--RG-------- 924 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l-------~~fV~~SS~s~~--~G-------- 924 (1392)
+|+|||+|+.... +.+.+++...+++|+.|+.++.+++.+.+... +.||++||.+.. .+
T Consensus 74 ~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~ 149 (361)
T 1kew_A 74 PDAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS 149 (361)
T ss_dssp CSEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred CCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence 9999999997531 23456788899999999999999887653232 399999997532 11
Q ss_pred -----------CCCChhHHHHHHHHHHHHHHHHHc-CCCeEEEEccccC
Q psy1119 925 -----------NAGQTNYGMANSIMERICEARRAE-GLPGLAVEWGAVG 961 (1392)
Q Consensus 925 -----------~~gq~~Yaaana~ld~la~~r~~~-Glp~~ai~~g~~~ 961 (1392)
......|+++|.+++.+++..+.+ |++...+..+.+-
T Consensus 150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~ 198 (361)
T 1kew_A 150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNY 198 (361)
T ss_dssp SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE
T ss_pred ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeE
Confidence 235679999999999999876554 9999999887753
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.31 E-value=3.8e-12 Score=151.11 Aligned_cols=164 Identities=18% Similarity=0.169 Sum_probs=120.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHH--hCCceEEEecCCCcccHHHHHHH----HHHhcCCceEEEEeccCCCHHHHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVL--RGARKLVLTSRSGVKNGYQALRI----KIWKSYDVQVLISTDDITTEAGVVNLL 853 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~--~GAr~lvl~sRs~~~~~~~~~~~----~~l~~~G~~v~~~~~Dv~~~~~v~~l~ 853 (1392)
.++++|||||+|+||.++++.|++ +|++ |++++|+........... ......+..+.++.+|++|.++++++
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~- 86 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAK-VVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL- 86 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSE-EEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCe-EEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh-
Confidence 468999999999999999999999 8997 777888653111100000 00112344567889999999998876
Q ss_pred HHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC------
Q psy1119 854 TEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG------ 927 (1392)
Q Consensus 854 ~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g------ 927 (1392)
....+|.|||+|+... .+.+++...+++|+.|+.++.+++... ... ||++||.+ ..|...
T Consensus 87 ----~~~~~D~vih~A~~~~------~~~~~~~~~~~~Nv~gt~~ll~aa~~~--~~~-~V~~SS~~-vyg~~~~~~~E~ 152 (362)
T 3sxp_A 87 ----EKLHFDYLFHQAAVSD------TTMLNQELVMKTNYQAFLNLLEIARSK--KAK-VIYASSAG-VYGNTKAPNVVG 152 (362)
T ss_dssp ----TTSCCSEEEECCCCCG------GGCCCHHHHHHHHTHHHHHHHHHHHHT--TCE-EEEEEEGG-GGCSCCSSBCTT
T ss_pred ----hccCCCEEEECCccCC------ccccCHHHHHHHHHHHHHHHHHHHHHc--CCc-EEEeCcHH-HhCCCCCCCCCC
Confidence 3458999999999542 244678899999999999999988654 333 99999954 344332
Q ss_pred -----ChhHHHHHHHHHHHHHHHHHcCCCeEEEEcccc
Q psy1119 928 -----QTNYGMANSIMERICEARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 928 -----q~~Yaaana~ld~la~~r~~~Glp~~ai~~g~~ 960 (1392)
.+.|+++|.+.+.+++....+ ++...+..+.+
T Consensus 153 ~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~~~~lR~~~v 189 (362)
T 3sxp_A 153 KNESPENVYGFSKLCMDEFVLSHSND-NVQVGLRYFNV 189 (362)
T ss_dssp SCCCCSSHHHHHHHHHHHHHHHTTTT-SCEEEEEECSE
T ss_pred CCCCCCChhHHHHHHHHHHHHHHhcc-CCEEEEEeCce
Confidence 345999999999999987766 88888887554
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.31 E-value=2.4e-11 Score=141.98 Aligned_cols=158 Identities=15% Similarity=0.181 Sum_probs=122.9
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
++++||||+|+||.++++.|+++|.+ |+.++|+..... +.+. ..+.++.+|++|.++++++++. ..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~------~~~~---~~~~~~~~D~~~~~~~~~~~~~----~~ 67 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLS-VVVVDNLQTGHE------DAIT---EGAKFYNGDLRDKAFLRDVFTQ----EN 67 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCG------GGSC---TTSEEEECCTTCHHHHHHHHHH----SC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCE-EEEEeCCCcCch------hhcC---CCcEEEECCCCCHHHHHHHHhh----cC
Confidence 47999999999999999999999986 777777643321 1111 1456788999999999888765 47
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC------------CCh
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA------------GQT 929 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~------------gq~ 929 (1392)
+|.|||+|+..... .+.+++...+++|+.|+.+|.+++... ..+.||++||.+.. |.. ...
T Consensus 68 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~-~~~~~~~~~E~~~~~~~~ 140 (330)
T 2c20_A 68 IEAVMHFAADSLVG----VSMEKPLQYYNNNVYGALCLLEVMDEF--KVDKFIFSSTAATY-GEVDVDLITEETMTNPTN 140 (330)
T ss_dssp EEEEEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGG-CSCSSSSBCTTSCCCCSS
T ss_pred CCEEEECCcccCcc----ccccCHHHHHHHHhHHHHHHHHHHHHc--CCCEEEEeCCceee-CCCCCCCCCcCCCCCCCC
Confidence 99999999975322 145678889999999999999887653 45789999997654 322 357
Q ss_pred hHHHHHHHHHHHHHHHHHc-CCCeEEEEcccc
Q psy1119 930 NYGMANSIMERICEARRAE-GLPGLAVEWGAV 960 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~-Glp~~ai~~g~~ 960 (1392)
.|+.+|.+.+.+++....+ |++.+.+..+.+
T Consensus 141 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v 172 (330)
T 2c20_A 141 TYGETKLAIEKMLHWYSQASNLRYKIFRYFNV 172 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSCEEEEEECSEE
T ss_pred hHHHHHHHHHHHHHHHHHHhCCcEEEEecCcc
Confidence 8999999999999887665 899888887654
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.30 E-value=5.6e-12 Score=146.81 Aligned_cols=165 Identities=15% Similarity=0.116 Sum_probs=116.0
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecC-CCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSR-SGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sR-s~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
++++|||||+|+||.++++.|+++|++ |+.+.| +........ .+..+...+.++.++.+|++|.++++++++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 73 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYS-VNTTIRADPERKRDVS-FLTNLPGASEKLHFFNADLSNPDSFAAAIE----- 73 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE-EEEECCCC----CCCH-HHHTSTTHHHHEEECCCCTTCGGGGHHHHT-----
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCE-EEEEEeCCccchhHHH-HHHhhhccCCceEEEecCCCCHHHHHHHHc-----
Confidence 468999999999999999999999997 776777 431100001 111111112357788999999998887765
Q ss_pred CCccEEEECcccCCCccccCCCHHH-HHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCC----------
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPED-FNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQ---------- 928 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~-~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq---------- 928 (1392)
.+|+|||+|+.. +.+.++ +++.+++|+.|+.++.+++.+. ...+.||++||.++..+.+..
T Consensus 74 -~~d~vih~A~~~------~~~~~~~~~~~~~~nv~gt~~l~~aa~~~-~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~ 145 (322)
T 2p4h_X 74 -GCVGIFHTASPI------DFAVSEPEEIVTKRTVDGALGILKACVNS-KTVKRFIYTSSGSAVSFNGKDKDVLDESDWS 145 (322)
T ss_dssp -TCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTC-SSCCEEEEEEEGGGTSCSSSCCSEECTTCCC
T ss_pred -CCCEEEEcCCcc------cCCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccHHHcccCCCCCeecCCcccc
Confidence 479999999632 122222 4568999999999999988653 135799999999876543221
Q ss_pred ------------hhHHHHHHHHHHHHHHHH-HcCCCeEEEEcccc
Q psy1119 929 ------------TNYGMANSIMERICEARR-AEGLPGLAVEWGAV 960 (1392)
Q Consensus 929 ------------~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~ 960 (1392)
..|+++|...+.++.... ..|++...+..+.+
T Consensus 146 ~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v 190 (322)
T 2p4h_X 146 DVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFI 190 (322)
T ss_dssp CHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEE
T ss_pred chhhhcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCce
Confidence 169999999999887654 46999999888765
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1.2e-11 Score=143.39 Aligned_cols=158 Identities=16% Similarity=0.149 Sum_probs=121.0
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
++|||||+|+||.++++.|+++|++ |++++|....... .+. ..+.++.+|++|.++++++++.. .+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~~~~------~~~---~~~~~~~~Dl~~~~~~~~~~~~~----~~ 67 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLE-VAVLDNLATGKRE------NVP---KGVPFFRVDLRDKEGVERAFREF----RP 67 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCE-EEEECCCSSCCGG------GSC---TTCCEECCCTTCHHHHHHHHHHH----CC
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCE-EEEEECCCcCchh------hcc---cCeEEEECCCCCHHHHHHHHHhc----CC
Confidence 5899999999999999999999997 7777775322110 111 23456789999999999888752 68
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC-------------CCCh
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN-------------AGQT 929 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~-------------~gq~ 929 (1392)
|.|||+|+.... ..+.+++...+++|+.|+.++.+++... ..+.||++||.++..|. ....
T Consensus 68 d~vi~~a~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~ 141 (311)
T 2p5y_A 68 THVSHQAAQASV----KVSVEDPVLDFEVNLLGGLNLLEACRQY--GVEKLVFASTGGAIYGEVPEGERAEETWPPRPKS 141 (311)
T ss_dssp SEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCS
T ss_pred CEEEECccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCC
Confidence 999999986432 1345678899999999999999988653 45799999998444432 2467
Q ss_pred hHHHHHHHHHHHHHHHHH-cCCCeEEEEcccc
Q psy1119 930 NYGMANSIMERICEARRA-EGLPGLAVEWGAV 960 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~-~Glp~~ai~~g~~ 960 (1392)
.|+++|++++.+++..+. .|++...+..+.+
T Consensus 142 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v 173 (311)
T 2p5y_A 142 PYAASKAAFEHYLSVYGQSYGLKWVSLRYGNV 173 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEE
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCEEEEeeccc
Confidence 899999999999987644 4899988888765
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=2.4e-11 Score=143.19 Aligned_cols=154 Identities=11% Similarity=0.151 Sum_probs=120.6
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
-..++++|||||+|+||.++++.|+++|++ |+.++|+... ..+.++.+|++|.+++.++++
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~---------------~~~~~~~~Dl~d~~~~~~~~~--- 76 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRT-VRGFDLRPSG---------------TGGEEVVGSLEDGQALSDAIM--- 76 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCC-EEEEESSCCS---------------SCCSEEESCTTCHHHHHHHHT---
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCE-EEEEeCCCCC---------------CCccEEecCcCCHHHHHHHHh---
Confidence 456789999999999999999999999987 7778887532 235678899999999887765
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccC-------------
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRG------------- 924 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G------------- 924 (1392)
.+|+|||+|+... .+.++|...+++|+.|+.++.+++... ..+.||++||.+..-.
T Consensus 77 ---~~d~vih~A~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~V~~SS~~vyg~~~~~~~~~~E~~~ 145 (347)
T 4id9_A 77 ---GVSAVLHLGAFMS------WAPADRDRMFAVNVEGTRRLLDAASAA--GVRRFVFASSGEVYPENRPEFLPVTEDHP 145 (347)
T ss_dssp ---TCSEEEECCCCCC------SSGGGHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGTTTTSCSSSSBCTTSC
T ss_pred ---CCCEEEECCcccC------cchhhHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEECCHHHhCCCCCCCCCcCCCCC
Confidence 6999999998643 344566899999999999999988653 4579999999654322
Q ss_pred CCCChhHHHHHHHHHHHHHHHHH-cCCCeEEEEccccC
Q psy1119 925 NAGQTNYGMANSIMERICEARRA-EGLPGLAVEWGAVG 961 (1392)
Q Consensus 925 ~~gq~~Yaaana~ld~la~~r~~-~Glp~~ai~~g~~~ 961 (1392)
......|+.+|...+.+++.... .|++.+.+..+.+-
T Consensus 146 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~ 183 (347)
T 4id9_A 146 LCPNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQ 183 (347)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEE
T ss_pred CCCCChHHHHHHHHHHHHHHHHHhcCCceEEEccceEe
Confidence 23567899999999999987654 48998888887664
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.8e-11 Score=143.68 Aligned_cols=156 Identities=19% Similarity=0.187 Sum_probs=116.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
...+++|||||+|+||.++++.|+++|++ |++++|+...... .++.. ..+.++.+|++|.++++++++.
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~------~l~~~-~~~~~~~~Dl~d~~~~~~~~~~--- 87 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLERGDK-VVGIDNFATGRRE------HLKDH-PNLTFVEGSIADHALVNQLIGD--- 87 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCGG------GSCCC-TTEEEEECCTTCHHHHHHHHHH---
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCE-EEEEECCCccchh------hHhhc-CCceEEEEeCCCHHHHHHHHhc---
Confidence 35679999999999999999999999986 7777887432211 11111 2467789999999999988875
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc----C---------C
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR----G---------N 925 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~----G---------~ 925 (1392)
+++|.|||+|+..... +.+++. +++|+.|+.++.+++.+. ..+.||++||.+..- . .
T Consensus 88 -~~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~~--~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~ 157 (333)
T 2q1w_A 88 -LQPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKKN--NVGRFVYFQTALCYGVKPIQQPVRLDHPRN 157 (333)
T ss_dssp -HCCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGCSCCCSSSBCTTSCCC
T ss_pred -cCCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHHh--CCCEEEEECcHHHhCCCcccCCCCcCCCCC
Confidence 3799999999976432 345555 899999999999988653 457999999976542 1 2
Q ss_pred CCChhHHHHHHHHHHHHHH-HHHcCCCeEEEEccc
Q psy1119 926 AGQTNYGMANSIMERICEA-RRAEGLPGLAVEWGA 959 (1392)
Q Consensus 926 ~gq~~Yaaana~ld~la~~-r~~~Glp~~ai~~g~ 959 (1392)
+....|+++|.+++.+++. .. +...+..+.
T Consensus 158 p~~~~Y~~sK~~~E~~~~~s~~----~~~ilR~~~ 188 (333)
T 2q1w_A 158 PANSSYAISKSANEDYLEYSGL----DFVTFRLAN 188 (333)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTC----CEEEEEESE
T ss_pred CCCCchHHHHHHHHHHHHhhhC----CeEEEeece
Confidence 3338999999999999986 43 666666653
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=2.4e-11 Score=133.71 Aligned_cols=142 Identities=12% Similarity=0.031 Sum_probs=109.7
Q ss_pred CeEEEEcCcchHHHHHHHHHH-HhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLV-LRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La-~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
++++||||+||||+++|+.|+ ++|++ |++++|+... ..+.+...+..+.++.+|++|+++++++++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~-V~~~~r~~~~------~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 72 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMH-ITLYGRQLKT------RIPPEIIDHERVTVIEGSFQNPGXLEQAVT------ 72 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCE-EEEEESSHHH------HSCHHHHTSTTEEEEECCTTCHHHHHHHHT------
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCce-EEEEecCccc------cchhhccCCCceEEEECCCCCHHHHHHHHc------
Confidence 679999999999999999999 89996 8888887420 112222235568889999999999988775
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCCh----------h
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQT----------N 930 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~----------~ 930 (1392)
.+|.||||||.. ++. +.++.++.... ..++||++||+++..+.++.. .
T Consensus 73 ~~d~vv~~ag~~-------------------n~~-~~~~~~~~~~~--~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~ 130 (221)
T 3r6d_A 73 NAEVVFVGAMES-------------------GSD-MASIVKALSRX--NIRRVIGVSMAGLSGEFPVALEKWTFDNLPIS 130 (221)
T ss_dssp TCSEEEESCCCC-------------------HHH-HHHHHHHHHHT--TCCEEEEEEETTTTSCSCHHHHHHHHHTSCHH
T ss_pred CCCEEEEcCCCC-------------------Chh-HHHHHHHHHhc--CCCeEEEEeeceecCCCCcccccccccccccH
Confidence 689999999853 122 55555555432 457999999999887777666 8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 931 YGMANSIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
|+++|.+++.+.+ ..|++...|..|.+-
T Consensus 131 y~~~K~~~e~~~~---~~~i~~~~vrpg~v~ 158 (221)
T 3r6d_A 131 YVQGERQARNVLR---ESNLNYTILRLTWLY 158 (221)
T ss_dssp HHHHHHHHHHHHH---HSCSEEEEEEECEEE
T ss_pred HHHHHHHHHHHHH---hCCCCEEEEechhhc
Confidence 9999999999886 478998888888763
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.2e-11 Score=143.69 Aligned_cols=156 Identities=14% Similarity=0.121 Sum_probs=118.9
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
+++|||||+|+||.++++.|+++| ..+++..|+..... .....+..+.+|+++ +++.++++ .
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~----------~~~~~~~~~~~Dl~~-~~~~~~~~------~ 63 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEE----------FVNEAARLVKADLAA-DDIKDYLK------G 63 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGG----------GSCTTEEEECCCTTT-SCCHHHHT------T
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChh----------hcCCCcEEEECcCCh-HHHHHHhc------C
Confidence 479999999999999999999999 44555555432211 113347788999999 87777664 6
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc-----------CCCCChh
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR-----------GNAGQTN 930 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~-----------G~~gq~~ 930 (1392)
+|.|||+|+.. ....+.+++...+++|+.|+.++.+++... ..+.||++||.+..- +......
T Consensus 64 ~d~vih~a~~~----~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~ 137 (313)
T 3ehe_A 64 AEEVWHIAANP----DVRIGAENPDEIYRNNVLATYRLLEAMRKA--GVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISL 137 (313)
T ss_dssp CSEEEECCCCC----CCC-CCCCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred CCEEEECCCCC----ChhhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCH
Confidence 99999999853 234566778899999999999999887654 457999999976542 2334678
Q ss_pred HHHHHHHHHHHHHHHHH-cCCCeEEEEccccC
Q psy1119 931 YGMANSIMERICEARRA-EGLPGLAVEWGAVG 961 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~-~Glp~~ai~~g~~~ 961 (1392)
|+++|.+.+.+++.... .|++...+..+.+-
T Consensus 138 Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~ 169 (313)
T 3ehe_A 138 YGASKLACEALIESYCHTFDMQAWIYRFANVI 169 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEECSCEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEeecccc
Confidence 99999999999987655 48998888887663
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1.2e-11 Score=147.88 Aligned_cols=164 Identities=14% Similarity=0.033 Sum_probs=119.3
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccH--HHHHHHHHHhcCCc-eEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNG--YQALRIKIWKSYDV-QVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~--~~~~~~~~l~~~G~-~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
+++|||||+|+||.++++.|+++|++ |++++|+..... ........+...+. .+.++.+|++|.+++.++++.+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 105 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYE-VHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI-- 105 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCE-EEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc--
Confidence 68999999999999999999999986 777888753210 01111111111123 5778899999999999988776
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC---CCCeEEEecccccccC----------C
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP---TLGQFVVFSSVSCGRG----------N 925 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~---~l~~fV~~SS~s~~~G----------~ 925 (1392)
++|.|||+|+.... ..+.+++...+++|+.|+.+|.+++.+... ....||++||.+..-+ .
T Consensus 106 --~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~ 179 (381)
T 1n7h_A 106 --KPDEVYNLAAQSHV----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPF 179 (381)
T ss_dssp --CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCC
T ss_pred --CCCEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCC
Confidence 78999999996532 134567889999999999999988865421 1248999999765422 2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHc-CCCeEE
Q psy1119 926 AGQTNYGMANSIMERICEARRAE-GLPGLA 954 (1392)
Q Consensus 926 ~gq~~Yaaana~ld~la~~r~~~-Glp~~a 954 (1392)
.....|+++|.+.+.+++..+.+ |++...
T Consensus 180 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ 209 (381)
T 1n7h_A 180 HPRSPYAASKCAAHWYTVNYREAYGLFACN 209 (381)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred CCCCchHHHHHHHHHHHHHHHHHhCCcEEE
Confidence 34678999999999999876655 777543
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=3.3e-11 Score=130.48 Aligned_cols=149 Identities=15% Similarity=0.101 Sum_probs=115.0
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
++++||||+|+||+++++.|+++|++ |++++|+..... .+. ..++.++.+|++|++++.++++ .
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~-V~~~~r~~~~~~-------~~~--~~~~~~~~~D~~~~~~~~~~~~------~ 67 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYE-VTVLVRDSSRLP-------SEG--PRPAHVVVGDVLQAADVDKTVA------G 67 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCGGGSC-------SSS--CCCSEEEESCTTSHHHHHHHHT------T
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEEeChhhcc-------ccc--CCceEEEEecCCCHHHHHHHHc------C
Confidence 68999999999999999999999986 888888753221 011 2356778999999998887764 4
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC----CChhHHHHHHH
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA----GQTNYGMANSI 937 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~----gq~~Yaaana~ 937 (1392)
+|.|||+||..... +. ...++.++.++.+++... ..++||++||.+.....+ +...|+++|..
T Consensus 68 ~d~vi~~a~~~~~~---~~--------~~~n~~~~~~~~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~ 134 (206)
T 1hdo_A 68 QDAVIVLLGTRNDL---SP--------TTVMSEGARNIVAAMKAH--GVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIR 134 (206)
T ss_dssp CSEEEECCCCTTCC---SC--------CCHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHH
T ss_pred CCEEEECccCCCCC---Cc--------cchHHHHHHHHHHHHHHh--CCCeEEEEeeeeeccCcccccccchhHHHHHHH
Confidence 79999999975431 11 136788999998887654 457999999986654444 57899999999
Q ss_pred HHHHHHHHHHcCCCeEEEEccccCc
Q psy1119 938 MERICEARRAEGLPGLAVEWGAVGE 962 (1392)
Q Consensus 938 ld~la~~r~~~Glp~~ai~~g~~~~ 962 (1392)
++.+++ ..|++...+..|.+++
T Consensus 135 ~e~~~~---~~~i~~~~lrp~~~~~ 156 (206)
T 1hdo_A 135 MHKVLR---ESGLKYVAVMPPHIGD 156 (206)
T ss_dssp HHHHHH---HTCSEEEEECCSEEEC
T ss_pred HHHHHH---hCCCCEEEEeCCcccC
Confidence 999984 4789988888887743
|
| >3el6_A Erythromycin dehydratase; dehydratase double hotdog fold CIS-proline, acyltransferase, antibiotic biosynthesis; 1.85A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.1e-10 Score=135.36 Aligned_cols=235 Identities=14% Similarity=0.156 Sum_probs=154.8
Q ss_pred eeeeeeccCCCCceeEeeccccCCCCcccccccchh-hHH----HHHHHHHHHHHHHcCCCCccCCEEeeeeeeeeeeee
Q psy1119 22 IGTLLKEAPRKGLVQLKNSFRSLSASPKRLASTALD-RVY----QRFQMAWETVSLMRGELYTEVPVVFENIKFMRATNV 96 (1392)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gh~id-r~l----~yl~l~W~t~a~~~~~~~~~~pv~fe~v~~~rat~l 96 (1392)
+|..... +..+...+...++ .++.-||.+|+|+ +++ +||.++.+...... .+.++||.|+++.++
T Consensus 40 LG~~~~~-~~~~~~~~~~~l~--~~~~pwL~dH~V~G~~v~Pga~ylemal~A~~~~~-------~~~l~dv~~~~pL~l 109 (313)
T 3el6_A 40 LLAAVDV-PGHGGAVFTGRLS--TDEQPWLAEHVVGGRTLVPGSVLVDLALAAGEDVG-------LPVLEELVLQRPLVL 109 (313)
T ss_dssp EEEEEEC-TTTSCEEEEEEEC--TTTCGGGGGEEETTEEBCCHHHHHHHHHHHHHHHT-------CCEEEEEEECSCCBC
T ss_pred CCccccc-CCCCceEEEEEEC--CCCCchhhcCEECCEEEecHHHHHHHHHHHHHHhC-------CCEEeEEEEccceEe
Confidence 4443332 3456677888777 4554599999999 777 99999999977653 468999999999999
Q ss_pred CCCCeEEEEEEEEe----ccccEEEeeC----------CcEEEEEEEEccCCcccccccCCCCCCCCCCCcccccCChhh
Q psy1119 97 PKEGSVEFIVMVQK----GSGNFEIVEG----------GAAIVTGKVYIPADVKTEMVRIPDQYKIPRTEGEAIELQSRD 162 (1392)
Q Consensus 97 ~~~~~v~~~v~i~~----~sg~Fei~~~----------~~~vvsG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 162 (1392)
+. +.+++.+.+.+ +...|+|.-. -..-++|+|......... .+.. +.......++.++
T Consensus 110 ~~-~~~~v~v~l~~~~~~~~~~f~i~S~~~~~~~~~~~w~~ha~G~v~~~~~~~~~--~~~~-----~~~~~~~~~~~~~ 181 (313)
T 3el6_A 110 AG-AGALLRMSVGAPDESGRRTIDVHAAEDVADLADAQWSQHATGTLAQGVAAGPR--DTEQ-----WPPEDAVRIPLDD 181 (313)
T ss_dssp CT-TCEEEEEEEEEECTTSCEEEEEEEEECCSSGGGCCCEEEEEEEEECCCCCCCC--CCSC-----SSCTTCEECCCTT
T ss_pred CC-CCEEEEEEEEeCCCCceEEEEEEEECCCCCCCCCCCEEEEEEEEEecCCCCCc--Chhh-----hhhccccccCHHH
Confidence 99 88888888876 3457888641 356889999865432211 1111 1112234689999
Q ss_pred HHHHHHhcCCccCccccceeeeccC--CceeEEEecc------cchhhhhhhhheecccc--CCCceecccceeeEEEcc
Q psy1119 163 IYKELRLRGYHYKGLFRSLNVADGA--GTQGKIRWHN------NWVAFMDNMLQLQILQY--DTRGLFVPTSIQKLVINV 232 (1392)
Q Consensus 163 iYkel~lrGy~y~~~F~~i~~~~~~--g~~g~i~W~~------nWv~f~d~mlQ~~il~~--~~~~l~~Pt~i~~~~i~p 232 (1392)
+|+.|+-+||+||+.||+|.+.... ...++|.+.+ -+-++||+.||..++.. ....++||..|+++.+..
T Consensus 182 ~Y~~l~~~G~~YGp~Fr~l~~~~~~~~e~~a~v~lp~~~~~~~lHPalLDaalq~~~~~~~~~~~~~~lP~~~~~v~~~~ 261 (313)
T 3el6_A 182 HYDGLAEQGYEYGPSFQALRAAWRKDDSVYAEVSIAADEEGYAFHPVLLDAVAQTLSLGALGEPGGGKLPFAWNTVTLHA 261 (313)
T ss_dssp HHHHHHHTTEEECGGGCCEEEEEEETTEEEEEEECCCCCCCCSSCHHHHHHHHHGGGGSTTCC----CCEEEEEEEEESC
T ss_pred HHHHHHHhCCccCccccceEEEEEcCCEEEEEEEccCCCCCceeCHHHHHHHHHHHHHhcccCCCceEeeeEEEEEEEEc
Confidence 9999999999999999999998553 3456777652 35689999999987643 456799999999998864
Q ss_pred hhhHh---hhhccCCCCCeeeEEEecccCcEEeccEEEeceeeeccCCCC
Q psy1119 233 SDHVN---LLSTLDEETPEYPVFVYKEVEVIKSGGVEIRGLKASAIPRKK 279 (1392)
Q Consensus 233 ~~h~~---~~~~~~~~~~~~~v~~~~~~~~~~~ggvei~gl~~~~~~rr~ 279 (1392)
..-.. .+.. .+...++|.+....+.++ ++|.|+....++|..
T Consensus 262 ~~~~~~~v~~~~--~~~~~~dv~l~D~~G~~v---~~i~gl~~r~v~~~~ 306 (313)
T 3el6_A 262 SGATSVRVVATP--AGADAMALRVTDPAGHLV---ATVDSLVVRSTGEKW 306 (313)
T ss_dssp SSCSEEEEEEEE--CSTTEEEEEEECTTSCEE---EEEEEEEEC------
T ss_pred CCCCEEEEEEEe--CCCCEEEEEEECCCCCEE---EEEEeEEEEECCCCC
Confidence 32110 1111 112345555554433332 577788877777654
|
| >3kg7_A CURH; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.77A {Lyngbya majuscula} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.9e-11 Score=140.82 Aligned_cols=193 Identities=12% Similarity=0.105 Sum_probs=138.9
Q ss_pred eeeeeeccCCCCceeEeeccccCCCCcccccccchh-hHH----HHHHHHHHHHHHHcCCCCccCCEEeeeeeeeeeeee
Q psy1119 22 IGTLLKEAPRKGLVQLKNSFRSLSASPKRLASTALD-RVY----QRFQMAWETVSLMRGELYTEVPVVFENIKFMRATNV 96 (1392)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gh~id-r~l----~yl~l~W~t~a~~~~~~~~~~pv~fe~v~~~rat~l 96 (1392)
+|..... +...+..+...++ .++.-||.||+|+ +++ |||.++++...... .++||.|+++.++
T Consensus 12 LG~~~~~-~~~~~~~w~~~l~--~~~~pwL~dH~v~g~~v~Pga~ylema~~A~~~~~---------~l~dv~~~~pl~l 79 (293)
T 3kg7_A 12 LGNKLEL-ASTGQTIYHQDIN--LNNHPWIGDHRVYDTPVIPGVSYIAMTLAAVGVPA---------AVEDINFQQPLFL 79 (293)
T ss_dssp TBEEEEC-TTTCCEEEEEEES--TTTCGGGGGEEETTEEBCCTTHHHHHHHHHHCSSE---------EEEEEEECSCCBC
T ss_pred CCccccC-CCCCceEEEEEEc--CCCCchhhcCEECCEEEecHHHHHHHHHHHHHhcC---------EeeEEEEeccEEc
Confidence 3444333 3344677888888 4554599999999 777 99999999866432 8999999999999
Q ss_pred CC-CCeEEEEEEEEe---cccc-EEEeeC-------CcEEEEEEEEccCCccc-ccccCCCCCCCCCCCcccccCChhhH
Q psy1119 97 PK-EGSVEFIVMVQK---GSGN-FEIVEG-------GAAIVTGKVYIPADVKT-EMVRIPDQYKIPRTEGEAIELQSRDI 163 (1392)
Q Consensus 97 ~~-~~~v~~~v~i~~---~sg~-Fei~~~-------~~~vvsG~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~di 163 (1392)
+. ++.+++.+.+.+ +..+ |+|.-. -..-++|+|++...... ....+.. . .... ..++.+++
T Consensus 80 ~~~~~~~~v~~~l~~~~~~~~~~f~i~s~~~~~~~~w~~h~~G~v~~~~~~~~~~~~~~~~----~-~~~~-~~~~~~~~ 153 (293)
T 3kg7_A 80 AESNTTRETQLMLHTADNVGKQFVEVFSRDGAKQEEWQQHASMSVSENPPPPPTLSVDIPA----L-CEQL-RPLDTDTL 153 (293)
T ss_dssp CSTTCCEEEEEEECCCCTTCCEEEEEEEEETTTCCCCEEEEEEEECSSCCCCCCCBCCHHH----H-HTTS-EEECHHHH
T ss_pred CCCCCCEEEEEEEEeCCCCCEEEEEEEEcCCCCCCCceEEeEEEEecccCCCCCCCCChHH----H-HhhC-eecCHHHH
Confidence 98 778888888875 3456 999752 25688999865322111 1000000 0 0111 36899999
Q ss_pred HHHHHhcCCccCccccceeeecc--CCceeEEEeccc----------chhhhhhhhheeccc----cCCCceecccceee
Q psy1119 164 YKELRLRGYHYKGLFRSLNVADG--AGTQGKIRWHNN----------WVAFMDNMLQLQILQ----YDTRGLFVPTSIQK 227 (1392)
Q Consensus 164 Ykel~lrGy~y~~~F~~i~~~~~--~g~~g~i~W~~n----------Wv~f~d~mlQ~~il~----~~~~~l~~Pt~i~~ 227 (1392)
|+.|+-+||+||+.||+|.+... +...|+|.+.+. +-++||++||..+.- ......+||+.|++
T Consensus 154 Y~~~~~~G~~yGp~F~~l~~~~~~~~~~~a~v~lp~~~~~~~~~~~lhP~lLD~~lq~~~~~~~~~~~~~~~~vP~~i~~ 233 (293)
T 3kg7_A 154 TEIYASISLVYGPMLQAVRQAWIGEETSLLEIEVPKALAFQLAGEPIHPVLIDACTRLTPDLFDFSSDSGVFWAPWRVKE 233 (293)
T ss_dssp HHHHHHTTEEECTTTCCEEEEEECSSCEEEEEECCTTTGGGCCSCSSCHHHHHHTTSCCTTGGGSCCSSCCEEEEEEEEE
T ss_pred HHHHHHhhCccChhhhHHHHHeECCCEEEEEEEeCccccccCCcceeChHHHHHHHHHHHHhcccccCCCcEEEeEEEeE
Confidence 99999999999999999998854 344677888654 568999999987321 23567999999999
Q ss_pred EEEcc
Q psy1119 228 LVINV 232 (1392)
Q Consensus 228 ~~i~p 232 (1392)
+.|.+
T Consensus 234 l~i~~ 238 (293)
T 3kg7_A 234 MTLSH 238 (293)
T ss_dssp EEESS
T ss_pred EEEee
Confidence 99964
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.7e-11 Score=134.81 Aligned_cols=147 Identities=12% Similarity=-0.045 Sum_probs=114.6
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
.++||||+|+||+++++.|+++|++ |++++|+... ...+... .+.++.+|++|.++ ..+..+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~-------~~~~~~~--~~~~~~~D~~d~~~--------~~~~~~ 63 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHE-VLAVVRDPQK-------AADRLGA--TVATLVKEPLVLTE--------ADLDSV 63 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHH-------HHHHTCT--TSEEEECCGGGCCH--------HHHTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCE-EEEEEecccc-------cccccCC--CceEEecccccccH--------hhcccC
Confidence 4899999999999999999999986 8888887321 2223333 45678999999887 234579
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC--------------C
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG--------------Q 928 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g--------------q 928 (1392)
|.|||+||...... ....++.++.++.++++.. . ..||++||+++..+.++ .
T Consensus 64 d~vi~~ag~~~~~~-----------~~~~n~~~~~~l~~a~~~~--~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
T 3h2s_A 64 DAVVDALSVPWGSG-----------RGYLHLDFATHLVSLLRNS--D-TLAVFILGSASLAMPGADHPMILDFPESAASQ 129 (224)
T ss_dssp SEEEECCCCCTTSS-----------CTHHHHHHHHHHHHTCTTC--C-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGS
T ss_pred CEEEECCccCCCcc-----------hhhHHHHHHHHHHHHHHHc--C-CcEEEEecceeeccCCCCccccccCCCCCccc
Confidence 99999999862211 1346888999988776543 3 89999999988877766 7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 929 TNYGMANSIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 929 ~~Yaaana~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
..|+++|.+.+.+.+.++..|++.+.+..|.+-
T Consensus 130 ~~y~~sK~~~e~~~~~~~~~~i~~~ivrp~~v~ 162 (224)
T 3h2s_A 130 PWYDGALYQYYEYQFLQMNANVNWIGISPSEAF 162 (224)
T ss_dssp TTHHHHHHHHHHHHHHTTCTTSCEEEEEECSBC
T ss_pred hhhHHHHHHHHHHHHHHhcCCCcEEEEcCcccc
Confidence 899999999998876666789999999998874
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=3.6e-11 Score=143.73 Aligned_cols=161 Identities=15% Similarity=0.116 Sum_probs=122.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
..++++||||+|+||.++++.|+++|++ |++++|+...... ... ..+.++.+|++|.+++.++++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~-------~~~--~~v~~~~~Dl~d~~~~~~~~~----- 92 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHY-VIASDWKKNEHMT-------EDM--FCDEFHLVDLRVMENCLKVTE----- 92 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCCSSSC-------GGG--TCSEEEECCTTSHHHHHHHHT-----
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCe-EEEEECCCccchh-------hcc--CCceEEECCCCCHHHHHHHhC-----
Confidence 4578999999999999999999999986 7778887533211 111 235678899999999887764
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc----------------
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR---------------- 923 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~---------------- 923 (1392)
.+|.|||+|+......+ +.+++...+++|+.|+.++.+++... ..+.||++||.+..-
T Consensus 93 -~~d~Vih~A~~~~~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~ 166 (379)
T 2c5a_A 93 -GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAARIN--GIKRFFYASSACIYPEFKQLETTNVSLKESD 166 (379)
T ss_dssp -TCSEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEGGGSCGGGSSSSSSCEECGGG
T ss_pred -CCCEEEECceecCcccc---cccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEeehheeCCCCCCCccCCCcCccc
Confidence 68999999997543222 13457788999999999999988653 457999999976432
Q ss_pred --CCCCChhHHHHHHHHHHHHHHHH-HcCCCeEEEEccccC
Q psy1119 924 --GNAGQTNYGMANSIMERICEARR-AEGLPGLAVEWGAVG 961 (1392)
Q Consensus 924 --G~~gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~~ 961 (1392)
.......|+++|.+.+.+++... ..|++...+..|.+-
T Consensus 167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~ 207 (379)
T 2c5a_A 167 AWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIY 207 (379)
T ss_dssp GSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEE
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCcee
Confidence 12345789999999999998654 348999988887653
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.25 E-value=3.1e-11 Score=139.88 Aligned_cols=156 Identities=14% Similarity=0.171 Sum_probs=120.6
Q ss_pred CeEEEEcCcchHHHHHHHHHHHh--CCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 782 KSYIICGGLGGFGLELADWLVLR--GARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~--GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
++++||||+|+||.++++.|+++ |.+ |++++|+..... .. . + +.++.+|++|.++++++++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~----~~---~--~--~~~~~~D~~d~~~~~~~~~~~--- 67 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTEN-VIASDIRKLNTD----VV---N--S--GPFEVVNALDFNQIEHLVEVH--- 67 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGGG-EEEEESCCCSCH----HH---H--S--SCEEECCTTCHHHHHHHHHHT---
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCCE-EEEEcCCCcccc----cc---C--C--CceEEecCCCHHHHHHHHhhc---
Confidence 67999999999999999999999 776 777788754421 11 1 2 456789999999999888753
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC------------C
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA------------G 927 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~------------g 927 (1392)
.+|.|||+|+..... ..+++...+++|+.|+.++.+++... ..+.||++||.+..-+.. .
T Consensus 68 -~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~ 139 (312)
T 2yy7_A 68 -KITDIYLMAALLSAT-----AEKNPAFAWDLNMNSLFHVLNLAKAK--KIKKIFWPSSIAVFGPTTPKENTPQYTIMEP 139 (312)
T ss_dssp -TCCEEEECCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHTT--SCSEEECCEEGGGCCTTSCSSSBCSSCBCCC
T ss_pred -CCCEEEECCccCCCc-----hhhChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHHhCCCCCCCCccccCcCCC
Confidence 689999999864321 23567888999999999999988653 457999999987654322 2
Q ss_pred ChhHHHHHHHHHHHHHHHHH-cCCCeEEEEcccc
Q psy1119 928 QTNYGMANSIMERICEARRA-EGLPGLAVEWGAV 960 (1392)
Q Consensus 928 q~~Yaaana~ld~la~~r~~-~Glp~~ai~~g~~ 960 (1392)
...|+++|.+.+.+++..+. .|++...+..+.+
T Consensus 140 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v 173 (312)
T 2yy7_A 140 STVYGISKQAGERWCEYYHNIYGVDVRSIRYPGL 173 (312)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEE
T ss_pred CchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeE
Confidence 57899999999999987644 4888888877654
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.25 E-value=5.3e-11 Score=140.13 Aligned_cols=170 Identities=12% Similarity=0.090 Sum_probs=121.7
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCc-eEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGAR-KLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr-~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
..++++|||||+|+||.++++.|+++|.. +|+.++|+...... ..++.+. ....+.++.+|++|.+++.++++..
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~--~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~- 97 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNL--NNVKSIQ-DHPNYYFVKGEIQNGELLEHVIKER- 97 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCG--GGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccch--hhhhhhc-cCCCeEEEEcCCCCHHHHHHHHhhc-
Confidence 35678999999999999999999999943 35556665422111 1111111 1236788999999999999998764
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC-----------
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA----------- 926 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~----------- 926 (1392)
++|.|||+|+..... .+.+++...+++|+.|+.+|.+++... ....||++||.+..-+.+
T Consensus 98 ---~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~v~~SS~~vy~~~~~~~~~~E~~~~ 168 (346)
T 4egb_A 98 ---DVQVIVNFAAESHVD----RSIENPIPFYDTNVIGTVTLLELVKKY--PHIKLVQVSTDEVYGSLGKTGRFTEETPL 168 (346)
T ss_dssp ---TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHHHHS--TTSEEEEEEEGGGGCCCCSSCCBCTTSCC
T ss_pred ---CCCEEEECCcccchh----hhhhCHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeCchHHhCCCCcCCCcCCCCCC
Confidence 699999999975432 245677889999999999999988764 457899999975443321
Q ss_pred -CChhHHHHHHHHHHHHHHHHHc-CCCeEEEEccccC
Q psy1119 927 -GQTNYGMANSIMERICEARRAE-GLPGLAVEWGAVG 961 (1392)
Q Consensus 927 -gq~~Yaaana~ld~la~~r~~~-Glp~~ai~~g~~~ 961 (1392)
....|+.+|...+.+++....+ |++.+.+..+.+-
T Consensus 169 ~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~ 205 (346)
T 4egb_A 169 APNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNY 205 (346)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE
T ss_pred CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeccee
Confidence 2378999999999999876654 9999988887653
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.24 E-value=3.5e-11 Score=139.74 Aligned_cols=148 Identities=13% Similarity=0.089 Sum_probs=92.7
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
++++|||||+|+||.++++.|+++|++ |+.++|+... .+ ++.+|+++.+++.++++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~-------------~~----~~~~Dl~d~~~~~~~~~~~---- 59 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWH-AVGCGFRRAR-------------PK----FEQVNLLDSNAVHHIIHDF---- 59 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCE-EEEEC-----------------------------------CHHHHHHH----
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCe-EEEEccCCCC-------------CC----eEEecCCCHHHHHHHHHhh----
Confidence 468999999999999999999999986 7778886321 01 5679999999998888765
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccC----------CCCChh
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRG----------NAGQTN 930 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G----------~~gq~~ 930 (1392)
++|.|||+||.... ..+.+++...+++|+.|+.++.+++... . ..||++||.+...+ ......
T Consensus 60 ~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~ 132 (315)
T 2ydy_A 60 QPHVIVHCAAERRP----DVVENQPDAASQLNVDASGNLAKEAAAV--G-AFLIYISSDYVFDGTNPPYREEDIPAPLNL 132 (315)
T ss_dssp CCSEEEECC-----------------------CHHHHHHHHHHHHH--T-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSH
T ss_pred CCCEEEECCcccCh----hhhhcCHHHHHHHHHHHHHHHHHHHHHc--C-CeEEEEchHHHcCCCCCCCCCCCCCCCcCH
Confidence 69999999997542 2356788999999999999999988764 2 38999999887544 345778
Q ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEEcccc
Q psy1119 931 YGMANSIMERICEARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~Glp~~ai~~g~~ 960 (1392)
|+++|.+++.+++.. +++...+..+.+
T Consensus 133 Y~~sK~~~e~~~~~~---~~~~~~lR~~~v 159 (315)
T 2ydy_A 133 YGKTKLDGEKAVLEN---NLGAAVLRIPIL 159 (315)
T ss_dssp HHHHHHHHHHHHHHH---CTTCEEEEECSE
T ss_pred HHHHHHHHHHHHHHh---CCCeEEEeeeee
Confidence 999999999999874 566666666654
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.23 E-value=4.9e-11 Score=135.32 Aligned_cols=144 Identities=17% Similarity=0.179 Sum_probs=115.5
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
+++||||+|+||.++++.|+ +|++ |++++|+.... .| +.+|++|+++++++++.. ++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~-V~~~~r~~~~~------------~~-----~~~Dl~~~~~~~~~~~~~----~~ 58 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLS-ERHE-VIKVYNSSEIQ------------GG-----YKLDLTDFPRLEDFIIKK----RP 58 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHT-TTSC-EEEEESSSCCT------------TC-----EECCTTSHHHHHHHHHHH----CC
T ss_pred EEEEECCCChhHHHHHHHHh-cCCe-EEEecCCCcCC------------CC-----ceeccCCHHHHHHHHHhc----CC
Confidence 58999999999999999999 5865 88888875310 13 789999999999988765 79
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC----------ChhHH
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG----------QTNYG 932 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g----------q~~Ya 932 (1392)
|.|||+||.... +.+.++++..++.|+.|+.++.+++... . ..||++||.++..+.++ ...|+
T Consensus 59 d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~ 131 (273)
T 2ggs_A 59 DVIINAAAMTDV----DKCEIEKEKAYKINAEAVRHIVRAGKVI--D-SYIVHISTDYVFDGEKGNYKEEDIPNPINYYG 131 (273)
T ss_dssp SEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHT--T-CEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHH
T ss_pred CEEEECCcccCh----hhhhhCHHHHHHHhHHHHHHHHHHHHHh--C-CeEEEEecceeEcCCCCCcCCCCCCCCCCHHH
Confidence 999999997542 1345678999999999999999988653 2 48999999987765543 67999
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 933 MANSIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 933 aana~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
++|.+++.+++. ++...+..+.+-
T Consensus 132 ~sK~~~e~~~~~-----~~~~~iR~~~v~ 155 (273)
T 2ggs_A 132 LSKLLGETFALQ-----DDSLIIRTSGIF 155 (273)
T ss_dssp HHHHHHHHHHCC-----TTCEEEEECCCB
T ss_pred HHHHHHHHHHhC-----CCeEEEeccccc
Confidence 999999999976 566666666553
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.3e-11 Score=143.14 Aligned_cols=156 Identities=19% Similarity=0.181 Sum_probs=119.0
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
+++|||||+|+||.++++.|+++|++ |+.++|+....... ....+.++.+|++|.+ +.+++ ..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~---------~~~~~~~~~~Dl~d~~-~~~~~------~~ 63 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYE-VVVVDNLSSGRREF---------VNPSAELHVRDLKDYS-WGAGI------KG 63 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEECCCSSCCGGG---------SCTTSEEECCCTTSTT-TTTTC------CC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCE-EEEEeCCCCCchhh---------cCCCceEEECccccHH-HHhhc------CC
Confidence 36899999999999999999999997 77788875432211 1234667899999987 54333 23
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC-----------CCChh
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN-----------AGQTN 930 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~-----------~gq~~ 930 (1392)
|.|||+|+... ...+.+++...+++|+.|+.++.+++... ..+.||++||.+..-+. .....
T Consensus 64 -d~vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~ 136 (312)
T 3ko8_A 64 -DVVFHFAANPE----VRLSTTEPIVHFNENVVATFNVLEWARQT--GVRTVVFASSSTVYGDADVIPTPEEEPYKPISV 136 (312)
T ss_dssp -SEEEECCSSCS----SSGGGSCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred -CEEEECCCCCC----chhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCCh
Confidence 99999999532 24456678889999999999999988654 45689999997654222 23688
Q ss_pred HHHHHHHHHHHHHHHHHc-CCCeEEEEccccC
Q psy1119 931 YGMANSIMERICEARRAE-GLPGLAVEWGAVG 961 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~-Glp~~ai~~g~~~ 961 (1392)
|+++|.+.+.+++....+ |++.+.+..+.+-
T Consensus 137 Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~ 168 (312)
T 3ko8_A 137 YGAAKAAGEVMCATYARLFGVRCLAVRYANVV 168 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEeecccc
Confidence 999999999999876654 9998888887653
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=4.2e-11 Score=139.15 Aligned_cols=151 Identities=17% Similarity=0.224 Sum_probs=117.7
Q ss_pred eEEEEcCcchHHHHHHHHHHHh--CCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 783 SYIICGGLGGFGLELADWLVLR--GARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~--GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
++|||||+|+||.++++.|+++ |.+ |+.++|+..... + +.++.+|++|.+++.++++. .
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~------------~--~~~~~~D~~d~~~~~~~~~~----~ 61 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKN-VIASDIVQRDTG------------G--IKFITLDVSNRDEIDRAVEK----Y 61 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGG-EEEEESSCCCCT------------T--CCEEECCTTCHHHHHHHHHH----T
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCE-EEEecCCCcccc------------C--ceEEEecCCCHHHHHHHHhh----c
Confidence 3799999999999999999999 776 777777643321 2 35678999999999888775 2
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC------------CC
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA------------GQ 928 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~------------gq 928 (1392)
.+|.|||+|+.... .+.+++...+++|+.|+.++.+++... ..+.||++||.+...+.. ..
T Consensus 62 ~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~ 134 (317)
T 3ajr_A 62 SIDAIFHLAGILSA-----KGEKDPALAYKVNMNGTYNILEAAKQH--RVEKVVIPSTIGVFGPETPKNKVPSITITRPR 134 (317)
T ss_dssp TCCEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC
T ss_pred CCcEEEECCcccCC-----ccccChHHHhhhhhHHHHHHHHHHHHc--CCCEEEEecCHHHhCCCCCCCCccccccCCCC
Confidence 69999999996432 123567888999999999999988653 457999999987654321 36
Q ss_pred hhHHHHHHHHHHHHHHHH-HcCCCeEEEEccc
Q psy1119 929 TNYGMANSIMERICEARR-AEGLPGLAVEWGA 959 (1392)
Q Consensus 929 ~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~ 959 (1392)
..|+++|.+.+.+++... ..|++...+..+.
T Consensus 135 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~ 166 (317)
T 3ajr_A 135 TMFGVTKIAAELLGQYYYEKFGLDVRSLRYPG 166 (317)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECE
T ss_pred chHHHHHHHHHHHHHHHHHhcCCeEEEEecCc
Confidence 789999999999998654 4589988886543
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=4.7e-11 Score=140.03 Aligned_cols=162 Identities=13% Similarity=0.104 Sum_probs=121.1
Q ss_pred eEEEEcCcchHHHHHHHHHHHh---C---CceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 783 SYIICGGLGGFGLELADWLVLR---G---ARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~---G---Ar~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
++|||||+|+||.++++.|+++ | ++ |+.++|+...... ..++.+. .+.++.++.+|++|.+++++++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~-V~~~~r~~~~~~~--~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~--- 74 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADE-VIVLDSLTYAGNR--ANLAPVD-ADPRLRFVHGDIRDAGLLAREL--- 74 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSE-EEEEECCCTTCCG--GGGGGGT-TCTTEEEEECCTTCHHHHHHHT---
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceE-EEEEECCCccCch--hhhhhcc-cCCCeEEEEcCCCCHHHHHHHh---
Confidence 5899999999999999999997 7 65 7777876421110 0111121 1346788899999999887765
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc-----------CC
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR-----------GN 925 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~-----------G~ 925 (1392)
..+|.|||+|+.... +.+.+++...+++|+.|+.++.+++.+. ..+.||++||.+..- +.
T Consensus 75 ---~~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~--~~~~~v~~SS~~vyg~~~~~~~~E~~~~ 145 (337)
T 1r6d_A 75 ---RGVDAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVDA--GVGRVVHVSTNQVYGSIDSGSWTESSPL 145 (337)
T ss_dssp ---TTCCEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHT--TCCEEEEEEEGGGGCCCSSSCBCTTSCC
T ss_pred ---cCCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEecchHHhCCCCCCCCCCCCCC
Confidence 479999999996431 1234567789999999999999988764 357999999976432 12
Q ss_pred CCChhHHHHHHHHHHHHHHHHH-cCCCeEEEEcccc
Q psy1119 926 AGQTNYGMANSIMERICEARRA-EGLPGLAVEWGAV 960 (1392)
Q Consensus 926 ~gq~~Yaaana~ld~la~~r~~-~Glp~~ai~~g~~ 960 (1392)
.....|+++|.+.+.+++..+. .|++...+..+.+
T Consensus 146 ~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v 181 (337)
T 1r6d_A 146 EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNN 181 (337)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEE
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeee
Confidence 3567899999999999987554 4999998888765
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=3.5e-11 Score=142.50 Aligned_cols=161 Identities=16% Similarity=0.197 Sum_probs=121.0
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhC-CceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRG-ARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~G-Ar~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
+++++|||||+|+||.++++.|+++| .+ |++++|+..... ...+. ++. +.+|+++.+.++++++. ..
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~-V~~~~r~~~~~~-----~~~~~--~~~---~~~d~~~~~~~~~~~~~-~~ 112 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALNDKGITD-ILVVDNLKDGTK-----FVNLV--DLN---IADYMDKEDFLIQIMAG-EE 112 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCC-EEEEECCSSGGG-----GGGTT--TSC---CSEEEEHHHHHHHHHTT-CC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCcE-EEEEecCCCcch-----hhccc--Cce---EeeecCcHHHHHHHHhh-cc
Confidence 45789999999999999999999999 65 777888753321 01111 222 67899999988877754 23
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC-----------
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG----------- 927 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g----------- 927 (1392)
++++|.|||+|+.... +.+++...+++|+.|+.++.+++.+. .. .||++||.+..-+..+
T Consensus 113 ~~~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~~--~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p 183 (357)
T 2x6t_A 113 FGDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATYGGRTSDFIESREYEKP 183 (357)
T ss_dssp CSSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH--TC-CEEEEEEGGGGCSCSSCCCSSGGGCCC
T ss_pred cCCCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEcchHHhCCCCCCCcCCcCCCCC
Confidence 5689999999997543 23457788999999999999988764 34 8999999876433332
Q ss_pred ChhHHHHHHHHHHHHHHHHHc-CCCeEEEEccccC
Q psy1119 928 QTNYGMANSIMERICEARRAE-GLPGLAVEWGAVG 961 (1392)
Q Consensus 928 q~~Yaaana~ld~la~~r~~~-Glp~~ai~~g~~~ 961 (1392)
...|+++|.+.+.+++..+.+ |++...+..+.+-
T Consensus 184 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~ 218 (357)
T 2x6t_A 184 LNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVY 218 (357)
T ss_dssp SSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEE
T ss_pred CChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEE
Confidence 678999999999999876544 8898888887653
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.22 E-value=4.2e-11 Score=147.60 Aligned_cols=166 Identities=19% Similarity=0.201 Sum_probs=123.2
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHh---CCceEEEecCCCcccHHHHHHHHHHhc------------CCceEEEEeccC
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLR---GARKLVLTSRSGVKNGYQALRIKIWKS------------YDVQVLISTDDI 843 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~---GAr~lvl~sRs~~~~~~~~~~~~~l~~------------~G~~v~~~~~Dv 843 (1392)
..++++|||||+|+||.++++.|+++ |++ |+++.|+...........+.+.. .+.++.++.+|+
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~-V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 149 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGR-LICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK 149 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCE-EEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCE-EEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence 46789999999999999999999999 886 88888986433222222111111 135788899999
Q ss_pred C------CHHHHHHHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEec
Q psy1119 844 T------TEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFS 917 (1392)
Q Consensus 844 ~------~~~~v~~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~S 917 (1392)
+ +.+.++++++ .+|.|||+|+.... +.+...+++|+.|+.+|.+++... ....||++|
T Consensus 150 ~~~~~gld~~~~~~~~~------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa~~~--~~~~~V~iS 213 (478)
T 4dqv_A 150 SEPDLGLDQPMWRRLAE------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIALTT--KLKPFTYVS 213 (478)
T ss_dssp TSGGGGCCHHHHHHHHH------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHHTSS--SCCCEEEEE
T ss_pred CCcccCCCHHHHHHHHc------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEe
Confidence 8 6667777665 48999999997643 234567889999999999987653 456899999
Q ss_pred ccccccCCCCC----------------------hhHHHHHHHHHHHHHHHHH-cCCCeEEEEccccC
Q psy1119 918 SVSCGRGNAGQ----------------------TNYGMANSIMERICEARRA-EGLPGLAVEWGAVG 961 (1392)
Q Consensus 918 S~s~~~G~~gq----------------------~~Yaaana~ld~la~~r~~-~Glp~~ai~~g~~~ 961 (1392)
|.+........ ..|+++|...+.+++.... .|++...+..|.+-
T Consensus 214 S~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~ 280 (478)
T 4dqv_A 214 TADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMIL 280 (478)
T ss_dssp EGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE
T ss_pred ehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceee
Confidence 97543221111 3399999999999998765 59999999988773
|
| >2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.9e-11 Score=113.20 Aligned_cols=72 Identities=46% Similarity=0.806 Sum_probs=66.1
Q ss_pred cchHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhhccCCHHHHHHHHhccc
Q psy1119 1019 ATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIRGLTFAKLQDIAVSFE 1090 (1392)
Q Consensus 1019 ~~~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i~~~ti~~La~~~~~~~ 1090 (1392)
...+.+.+|++|+++++++|+++.+|.+||+||||+||||+||+++||+.||..++..+|+.+|++++....
T Consensus 8 ~~~v~~~va~iLg~~~~~~I~~~~~l~dLG~DSL~aVELr~~Le~~fgi~lp~~~l~~~Ti~~La~~v~~~~ 79 (91)
T 2cg5_B 8 QRDLVEAVAHILGIRDLAAVNLDSSLADLGLDALMSVEVRQTLERELNLVLSVREVRQLTLRKLQELSSKAD 79 (91)
T ss_dssp CTTHHHHHHHHTTCCSCTTSCTTSBTTTTTCCHHHHHHHHHHHHHHHCCCCCHHHHHTCBHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHCCCchhhCCCCCCHHHhCCcchHHHHHHHHHHHHHCCCCCHHHHHhCCHHHHHHHHhccc
Confidence 468999999999997668999999999999999999999999999999999999997789999999987654
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=6.5e-11 Score=139.45 Aligned_cols=162 Identities=14% Similarity=0.133 Sum_probs=121.7
Q ss_pred CeEEEEcCcchHHHHHHHHHHHh--CCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 782 KSYIICGGLGGFGLELADWLVLR--GARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~--GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
+++|||||+|+||.++++.|+++ |++ |+.++|+...... ..+..+. +..+.++.+|++|.+++.++++
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~~--~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~----- 74 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVH-VTVLDKLTYAGNK--ANLEAIL--GDRVELVVGDIADAELVDKLAA----- 74 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCE-EEEEECCCTTCCG--GGTGGGC--SSSEEEEECCTTCHHHHHHHHT-----
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCE-EEEEeCCCCCCCh--hHHhhhc--cCCeEEEECCCCCHHHHHHHhh-----
Confidence 58999999999999999999999 776 7777886421110 1111222 2457788999999998887765
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc----------------
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR---------------- 923 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~---------------- 923 (1392)
.+|.|||+|+.... +.+.+++...+++|+.|+.++.+++.+. .. .||++||.+..-
T Consensus 75 -~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~ 146 (348)
T 1oc2_A 75 -KADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY--DI-RFHHVSTDEVYGDLPLREDLPGHGEGPG 146 (348)
T ss_dssp -TCSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH--TC-EEEEEEEGGGGCCBCCGGGSTTTTCSTT
T ss_pred -cCCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh--CC-eEEEecccceeCCCcccccccccccccC
Confidence 35999999997531 2234567889999999999999988765 33 899999976431
Q ss_pred -------CCCCChhHHHHHHHHHHHHHHHHH-cCCCeEEEEccccC
Q psy1119 924 -------GNAGQTNYGMANSIMERICEARRA-EGLPGLAVEWGAVG 961 (1392)
Q Consensus 924 -------G~~gq~~Yaaana~ld~la~~r~~-~Glp~~ai~~g~~~ 961 (1392)
+......|+++|.+.+.+++..+. .|++...+..+.+-
T Consensus 147 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~ 192 (348)
T 1oc2_A 147 EKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNY 192 (348)
T ss_dssp SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEE
T ss_pred CCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceee
Confidence 123567899999999999987654 48998888887753
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.20 E-value=5.8e-11 Score=136.30 Aligned_cols=142 Identities=19% Similarity=0.171 Sum_probs=113.4
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
+.+++|||||+|+||.++++.|+++|++ |+.++|+ .+|++|.+++.++++..
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~------------------------~~Dl~d~~~~~~~~~~~--- 62 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVE-VIPTDVQ------------------------DLDITNVLAVNKFFNEK--- 62 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEE-EEEECTT------------------------TCCTTCHHHHHHHHHHH---
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCe-EEeccCc------------------------cCCCCCHHHHHHHHHhc---
Confidence 4579999999999999999999999986 7778885 37999999999888765
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC-----------CC
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA-----------GQ 928 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~-----------gq 928 (1392)
.+|.|||+|+.... +.+.+++...+++|+.|+.++.+++.+. .. .||++||.+..-+.. ..
T Consensus 63 -~~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~--~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~ 134 (292)
T 1vl0_A 63 -KPNVVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYSV--GA-EIVQISTDYVFDGEAKEPITEFDEVNPQ 134 (292)
T ss_dssp -CCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHH--TC-EEEEEEEGGGSCSCCSSCBCTTSCCCCC
T ss_pred -CCCEEEECCccCCH----HHHhcCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEechHHeECCCCCCCCCCCCCCCCc
Confidence 68999999996432 2245678899999999999999988764 33 899999986554332 36
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCeEEEEcccc
Q psy1119 929 TNYGMANSIMERICEARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 929 ~~Yaaana~ld~la~~r~~~Glp~~ai~~g~~ 960 (1392)
..|+++|.+.+.+++... .+...+..+.+
T Consensus 135 ~~Y~~sK~~~E~~~~~~~---~~~~~lR~~~v 163 (292)
T 1vl0_A 135 SAYGKTKLEGENFVKALN---PKYYIVRTAWL 163 (292)
T ss_dssp SHHHHHHHHHHHHHHHHC---SSEEEEEECSE
T ss_pred cHHHHHHHHHHHHHHhhC---CCeEEEeeeee
Confidence 789999999999998743 35666666554
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.1e-10 Score=127.96 Aligned_cols=146 Identities=13% Similarity=0.062 Sum_probs=108.3
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
.++||||+|+||+++++.|+++|++ |++++|+... ...+. ..+.++.+|++|.++ +.+..+
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~-------~~~~~---~~~~~~~~D~~d~~~--------~~~~~~ 62 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHE-VTAIVRNAGK-------ITQTH---KDINILQKDIFDLTL--------SDLSDQ 62 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCSHH-------HHHHC---SSSEEEECCGGGCCH--------HHHTTC
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCE-EEEEEcCchh-------hhhcc---CCCeEEeccccChhh--------hhhcCC
Confidence 5899999999999999999999986 8888998421 12222 235678999999887 234579
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC------------Chh
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG------------QTN 930 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g------------q~~ 930 (1392)
|.|||+||.... ....++.++.++.++++.. ....||++||.++..+.++ ...
T Consensus 63 d~vi~~ag~~~~-------------~~~~~~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~ 127 (221)
T 3ew7_A 63 NVVVDAYGISPD-------------EAEKHVTSLDHLISVLNGT--VSPRLLVVGGAASLQIDEDGNTLLESKGLREAPY 127 (221)
T ss_dssp SEEEECCCSSTT-------------TTTSHHHHHHHHHHHHCSC--CSSEEEEECCCC-------------------CCC
T ss_pred CEEEECCcCCcc-------------ccchHHHHHHHHHHHHHhc--CCceEEEEecceEEEcCCCCccccccCCCCCHHH
Confidence 999999997432 1345788899988887542 3579999999988776654 355
Q ss_pred HHHHHHHHHHHHHHHH-HcCCCeEEEEccccCc
Q psy1119 931 YGMANSIMERICEARR-AEGLPGLAVEWGAVGE 962 (1392)
Q Consensus 931 Yaaana~ld~la~~r~-~~Glp~~ai~~g~~~~ 962 (1392)
|+.+|...+.+...++ ..|++.+.+..|.+-+
T Consensus 128 y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~v~g 160 (221)
T 3ew7_A 128 YPTARAQAKQLEHLKSHQAEFSWTYISPSAMFE 160 (221)
T ss_dssp SCCHHHHHHHHHHHHTTTTTSCEEEEECSSCCC
T ss_pred HHHHHHHHHHHHHHHhhccCccEEEEeCcceec
Confidence 9999999999966655 7899999999988743
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.18 E-value=1.4e-11 Score=144.58 Aligned_cols=165 Identities=17% Similarity=0.141 Sum_probs=115.2
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
++++|||||+|+||.++++.|+++|++ |+.+.|+........ .+..+. .+.++.++.+|++|.+++.++++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~-V~~~~r~~~~~~~~~-~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~------ 79 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYA-VNTTVRDPDNQKKVS-HLLELQ-ELGDLKIFRADLTDELSFEAPIA------ 79 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCE-EEEEESCTTCTTTTH-HHHHHG-GGSCEEEEECCTTTSSSSHHHHT------
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCE-EEEEEcCcchhhhHH-HHHhcC-CCCcEEEEecCCCChHHHHHHHc------
Confidence 578999999999999999999999997 666677643221111 112222 12357778999999888777664
Q ss_pred CccEEEECcccCCCccccCCCHHH-HHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC-------------
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPED-FNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA------------- 926 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~-~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~------------- 926 (1392)
.+|+|||+|+... + +.++ .++.+++|+.|+.++.+++.+.. ..+.||++||.++..+.+
T Consensus 80 ~~D~Vih~A~~~~---~---~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~ 152 (338)
T 2rh8_A 80 GCDFVFHVATPVH---F---ASEDPENDMIKPAIQGVVNVMKACTRAK-SVKRVILTSSAAAVTINQLDGTGLVVDEKNW 152 (338)
T ss_dssp TCSEEEEESSCCC---C------------CHHHHHHHHHHHHHHHHCT-TCCEEEEECCHHHHHHHHHTCSCCCCCTTTT
T ss_pred CCCEEEEeCCccC---C---CCCCcHHHHHHHHHHHHHHHHHHHHHcC-CcCEEEEEecHHHeecCCcCCCCcccChhhc
Confidence 4899999998542 1 1222 34588999999999999876542 257999999987533211
Q ss_pred -----------CChhHHHHHHHHHHHHHHHHH-cCCCeEEEEccccC
Q psy1119 927 -----------GQTNYGMANSIMERICEARRA-EGLPGLAVEWGAVG 961 (1392)
Q Consensus 927 -----------gq~~Yaaana~ld~la~~r~~-~Glp~~ai~~g~~~ 961 (1392)
....|+++|.+.+.++..... .|++...+..+.+-
T Consensus 153 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~ 199 (338)
T 2rh8_A 153 TDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMA 199 (338)
T ss_dssp TCC-------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEE
T ss_pred cchhhccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceE
Confidence 011599999999998876543 59999999887663
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=1e-10 Score=139.55 Aligned_cols=164 Identities=18% Similarity=0.122 Sum_probs=122.1
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhC-CceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRG-ARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~G-Ar~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
..+++++||||+|+||.++++.|+++| .+ |++++|+..... +.+. .+..+.++.+|++|.++++++++
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~-V~~~~r~~~~~~------~~l~-~~~~v~~~~~Dl~d~~~l~~~~~--- 98 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQ-VHVVDNLLSAEK------INVP-DHPAVRFSETSITDDALLASLQD--- 98 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSE-EEEECCCTTCCG------GGSC-CCTTEEEECSCTTCHHHHHHCCS---
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCce-EEEEECCCCCch------hhcc-CCCceEEEECCCCCHHHHHHHhh---
Confidence 356789999999999999999999999 76 788888753321 0111 13457788999999988776543
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc--------------
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR-------------- 923 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~-------------- 923 (1392)
.+|.|||+|+..... .+.+++...+++|+.|+.+|.+++... +....||++||.+..-
T Consensus 99 ---~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~ 170 (377)
T 2q1s_A 99 ---EYDYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERLKHF-KRLKKVVYSAAGCSIAEKTFDDAKATEETD 170 (377)
T ss_dssp ---CCSEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHHTTC-SSCCEEEEEEEC--------------CCCC
T ss_pred ---CCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCCHHHcCCCCCCCcCcccccc
Confidence 799999999964321 234567889999999999999887542 1346899999976421
Q ss_pred --CC-CCChhHHHHHHHHHHHHHHHHH-cCCCeEEEEccccC
Q psy1119 924 --GN-AGQTNYGMANSIMERICEARRA-EGLPGLAVEWGAVG 961 (1392)
Q Consensus 924 --G~-~gq~~Yaaana~ld~la~~r~~-~Glp~~ai~~g~~~ 961 (1392)
+. .....|+.+|.+.+.+++..+. .|++...+..|.+-
T Consensus 171 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~ 212 (377)
T 2q1s_A 171 IVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVY 212 (377)
T ss_dssp CCCSSCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEE
T ss_pred cccccCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEE
Confidence 11 3467899999999999987543 49999999887753
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.5e-10 Score=137.75 Aligned_cols=159 Identities=16% Similarity=0.045 Sum_probs=123.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHh-CCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCC-CHHHHHHHHHHHh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLR-GARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDIT-TEAGVVNLLTEAN 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~-GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~-~~~~v~~l~~~~~ 857 (1392)
..+++|||||+|.||.++++.|+++ |.+ |+.++|+...... +.. ...+.++.+|++ +.+.+.++++
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~-------~~~-~~~v~~~~~Dl~~d~~~~~~~~~--- 90 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTDWE-VFGMDMQTDRLGD-------LVK-HERMHFFEGDITINKEWVEYHVK--- 90 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSSCE-EEEEESCCTTTGG-------GGG-STTEEEEECCTTTCHHHHHHHHH---
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCE-EEEEeCChhhhhh-------hcc-CCCeEEEeCccCCCHHHHHHHhc---
Confidence 4578999999999999999999999 886 7888887533211 111 135778899999 9999988876
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC------------
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN------------ 925 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~------------ 925 (1392)
.+|.|||+|+...... ..++....+++|+.|+.+|.+++... . ..||++||.+. .|.
T Consensus 91 ---~~d~Vih~A~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~--~-~~~v~~SS~~v-yg~~~~~~~~e~~~~ 159 (372)
T 3slg_A 91 ---KCDVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSAVKY--G-KHLVFPSTSEV-YGMCADEQFDPDASA 159 (372)
T ss_dssp ---HCSEEEECBCCCCHHH----HHHCHHHHHHHHTTTTHHHHHHHHHH--T-CEEEEECCGGG-GBSCCCSSBCTTTCC
T ss_pred ---cCCEEEEcCccccHHH----HhhCHHHHHHHHHHHHHHHHHHHHHh--C-CcEEEeCcHHH-hCCCCCCCCCccccc
Confidence 4899999999754321 23456678899999999999988765 3 79999999543 333
Q ss_pred -------CCChhHHHHHHHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 926 -------AGQTNYGMANSIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 926 -------~gq~~Yaaana~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
.....|+.+|...+.+++....+|++.+.+..+.+-
T Consensus 160 ~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~ 202 (372)
T 3slg_A 160 LTYGPINKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWI 202 (372)
T ss_dssp EEECCTTCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEE
T ss_pred cccCCCCCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEcccccc
Confidence 233479999999999999877779999888887653
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.17 E-value=2.5e-11 Score=132.52 Aligned_cols=147 Identities=13% Similarity=0.108 Sum_probs=115.9
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCC-ceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGA-RKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GA-r~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.++++||||+|+||.++++.|+++|+ .+|++++|+... . ...+.++.+|+++.+++++++
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----------~--~~~~~~~~~D~~~~~~~~~~~------ 65 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----------E--HPRLDNPVGPLAELLPQLDGS------ 65 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----------C--CTTEECCBSCHHHHGGGCCSC------
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----------c--CCCceEEeccccCHHHHHHhh------
Confidence 46899999999999999999999998 248888998643 1 124667889998876654432
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIME 939 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld 939 (1392)
+|.|||+||.... +.++++..++.|+.++.++.+++.+. ..++||++||.+... .....|+++|.+++
T Consensus 66 --~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~--~~~~~y~~sK~~~e 133 (215)
T 2a35_A 66 --IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRALEM--GARHYLVVSALGADA--KSSIFYNRVKGELE 133 (215)
T ss_dssp --CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCT--TCSSHHHHHHHHHH
T ss_pred --hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHHHc--CCCEEEEECCcccCC--CCccHHHHHHHHHH
Confidence 9999999996432 23467788899999999999887653 457899999987653 34568999999999
Q ss_pred HHHHHHHHcCCC-eEEEEccccC
Q psy1119 940 RICEARRAEGLP-GLAVEWGAVG 961 (1392)
Q Consensus 940 ~la~~r~~~Glp-~~ai~~g~~~ 961 (1392)
.+++. .|++ ...+..|.+-
T Consensus 134 ~~~~~---~~~~~~~~vrp~~v~ 153 (215)
T 2a35_A 134 QALQE---QGWPQLTIARPSLLF 153 (215)
T ss_dssp HHHTT---SCCSEEEEEECCSEE
T ss_pred HHHHH---cCCCeEEEEeCceee
Confidence 99875 5898 8888888764
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.6e-10 Score=130.96 Aligned_cols=203 Identities=15% Similarity=0.142 Sum_probs=126.3
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCCC-------CCHHHHHHHHHHHHhhhccCCCCcEE
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNPP-------DTIPEMADSLLPHFKKRLVHGTDEIK 1221 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~~-------~sieelA~~y~~~I~~~q~qp~gPy~ 1221 (1392)
|.++||+|+|+.+++...|.+++..|.....|+.++ ...+. .+++.+++++.+.+... ...|++
T Consensus 23 g~g~~~vllHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~ 99 (291)
T 3qyj_A 23 GHGAPLLLLHGYPQTHVMWHKIAPLLANNFTVVATDLRGYGDSSRPASVPHHINYSKRVMAQDQVEVMSKL---GYEQFY 99 (291)
T ss_dssp CCSSEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTSCCCCCCGGGGGGSHHHHHHHHHHHHHHT---TCSSEE
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccccccCHHHHHHHHHHHHHHc---CCCCEE
Confidence 556899999999999999999999998888888876 11111 48999999988887643 456899
Q ss_pred EEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccc---------------cCCCCCh---------HHHHHHHH
Q psy1119 1222 LVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTS---------------LRKLPDW---------NAKLNYFL 1276 (1392)
Q Consensus 1222 L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~---------------l~~~~~~---------~~~l~~~~ 1276 (1392)
|+||||||.||+++|.+.. +.+ .++++|+.|...... ....... +..+..++
T Consensus 100 l~GhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (291)
T 3qyj_A 100 VVGHDRGARVAHRLALDHP---HRVKKLALLDIAPTHKMYRTTDQEFATAYYHWFFLIQPDNLPETLIGANPEYYLRKCL 176 (291)
T ss_dssp EEEETHHHHHHHHHHHHCT---TTEEEEEEESCCCHHHHHHTCCHHHHHHTTHHHHTTCSTTHHHHHHHTCHHHHHHHHH
T ss_pred EEEEChHHHHHHHHHHhCc---hhccEEEEECCCCcchhhhcchhhhhHHHHHHHHhccCCCchHHHHcCCHHHHHHHHH
Confidence 9999999999999998643 345 889998765321000 0001111 11122222
Q ss_pred hcC-CccccCCHHHHHHHHH---------HHHHHHHhhcccc-----CCCCCcccceEEEEeeCCCCC--CChhhcCccc
Q psy1119 1277 DLM-PEDATHSRTYQRNLAH---------AAYKRITSILKYT-----DPKHKAFGGNITLLRPTEQAL--PTAEDYGLSK 1339 (1392)
Q Consensus 1277 ~~~-~~~~~~~~~~l~~~~~---------~~~~~~~~~~~y~-----~~~~~~~~~pi~l~~a~~~~~--~~~~~~~W~~ 1339 (1392)
... ......+++.+..+.. .....+++...+. .....++++|++++.+++|.. .......|.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~ 256 (291)
T 3qyj_A 177 EKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEHDELDMKQKISCPVLVLWGEKGIIGRKYDVLATWRE 256 (291)
T ss_dssp HHHCSCGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTTHHHHHHHTTTTCCBCSCEEEEEETTSSHHHHSCHHHHHHT
T ss_pred HhcCCCcccCCHHHHHHHHHHhcCCCcchhHHHHHHcccccchhhcchhcCCccccceEEEecccccccchhhHHHHHHh
Confidence 111 1111123333322221 1122232222111 112347899999999998851 1123345776
Q ss_pred ccCCCeEEEEEccCccccccChHHH
Q psy1119 1340 VCKKPVKVHFVDGNHFTVLDNIKSA 1364 (1392)
Q Consensus 1340 ~~~g~v~v~~v~G~H~~ml~~~~~~ 1364 (1392)
+. ..+..+.++|+|+.++++|...
T Consensus 257 ~~-~~~~~~~~~~GH~~~~E~P~~v 280 (291)
T 3qyj_A 257 RA-IDVSGQSLPCGHFLPEEAPEET 280 (291)
T ss_dssp TB-SSEEEEEESSSSCHHHHSHHHH
T ss_pred hc-CCcceeeccCCCCchhhCHHHH
Confidence 65 4578888999999999998644
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.16 E-value=2.5e-10 Score=147.59 Aligned_cols=166 Identities=14% Similarity=0.144 Sum_probs=122.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.++++|||||+|+||.++++.|+++|++ |++++|+..........++.+. +..+.++.+|+++.++++++++..
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~--- 83 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIENGYD-CVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEY--- 83 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHS---
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCE-EEEEECCCcchHHHHHHHhhcc--CCceEEEEcCCCCHHHHHHHHHhC---
Confidence 4689999999999999999999999986 7777876543322222233332 334667889999999998888753
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC--------------
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN-------------- 925 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~-------------- 925 (1392)
.+|.|||+|+....... .+...+.+++|+.|+.++.++++.. ..+.||++||.+.. |.
T Consensus 84 -~~D~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~~iV~~SS~~vy-g~~~~~~~~~~~~E~~ 155 (699)
T 1z45_A 84 -KIDSVIHFAGLKAVGES----TQIPLRYYHNNILGTVVLLELMQQY--NVSKFVFSSSATVY-GDATRFPNMIPIPEEC 155 (699)
T ss_dssp -CCCEEEECCSCCCHHHH----HHSHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGG-CCGGGSTTCCSBCTTS
T ss_pred -CCCEEEECCcccCcCcc----ccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEECcHHHh-CCCccccccCCccccC
Confidence 79999999997543221 2234567899999999998887654 45789999997643 21
Q ss_pred --CCChhHHHHHHHHHHHHHHHHH---cCCCeEEEEccc
Q psy1119 926 --AGQTNYGMANSIMERICEARRA---EGLPGLAVEWGA 959 (1392)
Q Consensus 926 --~gq~~Yaaana~ld~la~~r~~---~Glp~~ai~~g~ 959 (1392)
.....|+++|.+++.+++..+. .|++.+.+..+.
T Consensus 156 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~ 194 (699)
T 1z45_A 156 PLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFN 194 (699)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECE
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEecc
Confidence 1347899999999999987654 488888887654
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.9e-10 Score=133.30 Aligned_cols=149 Identities=19% Similarity=0.197 Sum_probs=116.1
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
++++||||+|.||.++++.|+++|.+ |+.++|+. ... . + + .+.++.+|++ .+++.++++ .
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~-~~~--~--~---~----~~~~~~~Dl~-~~~~~~~~~------~ 62 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNT-PIILTRSI-GNK--A--I---N----DYEYRVSDYT-LEDLINQLN------D 62 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCC-C----------------CCEEEECCCC-HHHHHHHTT------T
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCE-EEEEeCCC-Ccc--c--C---C----ceEEEEcccc-HHHHHHhhc------C
Confidence 67999999999999999999999996 88888873 211 1 1 1 4667899999 888877664 7
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC------------CCh
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA------------GQT 929 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~------------gq~ 929 (1392)
+|.|||+|+..... ++...++.|+.|+.++.+++... ....||++||.+. .|.. ...
T Consensus 63 ~d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~~~~--~~~r~v~~SS~~v-yg~~~~~~~~E~~~~~p~~ 131 (311)
T 3m2p_A 63 VDAVVHLAATRGSQ--------GKISEFHDNEILTQNLYDACYEN--NISNIVYASTISA-YSDETSLPWNEKELPLPDL 131 (311)
T ss_dssp CSEEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGG-CCCGGGCSBCTTSCCCCSS
T ss_pred CCEEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEccHHH-hCCCCCCCCCCCCCCCCCc
Confidence 99999999976543 44567889999999999988654 4578999999554 3322 246
Q ss_pred hHHHHHHHHHHHHHHHHH-cCCCeEEEEccccC
Q psy1119 930 NYGMANSIMERICEARRA-EGLPGLAVEWGAVG 961 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~-~Glp~~ai~~g~~~ 961 (1392)
.|+.+|...+.+++.... .|++.+.+..+.+-
T Consensus 132 ~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~ 164 (311)
T 3m2p_A 132 MYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLY 164 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEE
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEEeeCcee
Confidence 899999999999987665 69998888887653
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.14 E-value=1.6e-10 Score=133.51 Aligned_cols=159 Identities=16% Similarity=0.195 Sum_probs=117.6
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
+++||||+|+||.++++.|+++|..+|+.++|+...... ..+. ++. +.+|+++.+.++++++... ++++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-----~~~~--~~~---~~~d~~~~~~~~~~~~~~~-~~~~ 69 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-----VNLV--DLN---IADYMDKEDFLIQIMAGEE-FGDV 69 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-----HHHH--TSC---CSEEEEHHHHHHHHHTTCC-CSSC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchh-----hhcC--cce---eccccccHHHHHHHHhccc-cCCC
Confidence 479999999999999999999993347778887543211 1112 222 6789999888877664211 3479
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC-----------ChhH
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG-----------QTNY 931 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g-----------q~~Y 931 (1392)
|.|||+|+.... +.+++...+++|+.|+.++.+++... .. .||++||.+..-+..+ ...|
T Consensus 70 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~--~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y 140 (310)
T 1eq2_A 70 EAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATYGGRTSDFIESREYEKPLNVY 140 (310)
T ss_dssp CEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH--TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHH
T ss_pred cEEEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChh
Confidence 999999997543 23456788999999999999988765 34 8999999865432222 5689
Q ss_pred HHHHHHHHHHHHHHHH-cCCCeEEEEccccC
Q psy1119 932 GMANSIMERICEARRA-EGLPGLAVEWGAVG 961 (1392)
Q Consensus 932 aaana~ld~la~~r~~-~Glp~~ai~~g~~~ 961 (1392)
+.+|.+.+.+++..+. .|++...+..|.+-
T Consensus 141 ~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~ 171 (310)
T 1eq2_A 141 GYSKFLFDEYVRQILPEANSQIVGFRYFNVY 171 (310)
T ss_dssp HHHHHHHHHHHHHHGGGCSSCEEEEEECEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEeCCcEE
Confidence 9999999999987654 48999888887653
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.13 E-value=4.4e-10 Score=132.00 Aligned_cols=157 Identities=11% Similarity=0.024 Sum_probs=116.6
Q ss_pred eEEEEcCcchHHHHHHHHHHHh-CCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCC-HHHHHHHHHHHhhcC
Q psy1119 783 SYIICGGLGGFGLELADWLVLR-GARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITT-EAGVVNLLTEANKLG 860 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~-GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~-~~~v~~l~~~~~~~g 860 (1392)
++|||||+|+||.++++.|+++ |++ |+.++|+..... .+.. ...+.++.+|+++ .+.++++++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~-------~~~~-~~~~~~~~~D~~~~~~~~~~~~~------ 66 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHYE-VYGLDIGSDAIS-------RFLN-HPHFHFVEGDISIHSEWIEYHVK------ 66 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCE-EEEEESCCGGGG-------GGTT-CTTEEEEECCTTTCSHHHHHHHH------
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCCE-EEEEeCCcchHH-------Hhhc-CCCeEEEeccccCcHHHHHhhcc------
Confidence 6899999999999999999998 786 788888753221 1111 2347788999998 456766664
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC-------------
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG------------- 927 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g------------- 927 (1392)
.+|.|||+|+...... ..+++...+++|+.|+.++.+++... . ..||++||.+..-...+
T Consensus 67 ~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~ 139 (345)
T 2bll_A 67 KCDVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVKY--R-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVG 139 (345)
T ss_dssp HCSEEEECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHHT--T-CEEEEECCGGGGBTCCCSSBCTTTCCCBCC
T ss_pred CCCEEEEcccccCccc----hhcCHHHHHHHHHHHHHHHHHHHHHh--C-CeEEEEecHHHcCCCCCCCcCCcccccccC
Confidence 4799999999753221 13457788999999999998888653 3 79999999765422221
Q ss_pred -----ChhHHHHHHHHHHHHHHHH-HcCCCeEEEEccccC
Q psy1119 928 -----QTNYGMANSIMERICEARR-AEGLPGLAVEWGAVG 961 (1392)
Q Consensus 928 -----q~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~~ 961 (1392)
...|+++|.+.+.+++... ..|++...+..+.+-
T Consensus 140 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~ 179 (345)
T 2bll_A 140 PVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWM 179 (345)
T ss_dssp CTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEE
T ss_pred cccCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 2379999999999998654 349999999887753
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.10 E-value=3.7e-10 Score=128.44 Aligned_cols=214 Identities=10% Similarity=0.019 Sum_probs=129.9
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC------C--CCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------H--TNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~--e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
|.++||+|+|+.+|+...|.+++..|.....++.++ . .....+++++++++.+.++.. ..+.|++|+|||
T Consensus 28 g~~~~vv~lHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l--~~~~p~~lvGhS 105 (301)
T 3kda_A 28 GQGPLVMLVHGFGQTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPPKTGYSGEQVAVYLHKLARQF--SPDRPFDLVAHD 105 (301)
T ss_dssp ESSSEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTCCCCSSCSSHHHHHHHHHHHHHHH--CSSSCEEEEEET
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHHhcCeEEEEcCCCCCCCCCCCCCccHHHHHHHHHHHHHHc--CCCccEEEEEeC
Confidence 356899999999999999999999998878888876 1 123458999999998888744 345579999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCcccc-------CCC-----------CChHH---------HHHHHHhc
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSL-------RKL-----------PDWNA---------KLNYFLDL 1278 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l-------~~~-----------~~~~~---------~l~~~~~~ 1278 (1392)
|||.+|+++|.+.. ..+ .++++++.++...... ... +...+ .+..+...
T Consensus 106 ~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (301)
T 3kda_A 106 IGIWNTYPMVVKNQ---ADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKS 182 (301)
T ss_dssp HHHHTTHHHHHHCG---GGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHHHHHHCSTTHHHHHHTTCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhCh---hhccEEEEEccCCCCCCccchhhhcchhhhhhhhHHHhhcCcchHHHHhccchHHHHHHHHHh
Confidence 99999999998642 345 8899998654321100 000 11111 11222222
Q ss_pred CC-ccccCCHHHHHHHHHHHH---------HHHHhh-----cccc-CCCCCcccceEEEEeeCCCCCCChhhcCcccccC
Q psy1119 1279 MP-EDATHSRTYQRNLAHAAY---------KRITSI-----LKYT-DPKHKAFGGNITLLRPTEQALPTAEDYGLSKVCK 1342 (1392)
Q Consensus 1279 ~~-~~~~~~~~~l~~~~~~~~---------~~~~~~-----~~y~-~~~~~~~~~pi~l~~a~~~~~~~~~~~~W~~~~~ 1342 (1392)
.. .....+++....+...+. ..+... .... .....++++|++++.+++| ........+.+..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D-~~~~~~~~~~~~~- 260 (301)
T 3kda_A 183 HASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQMPTMTLAGGGAGG-MGTFQLEQMKAYA- 260 (301)
T ss_dssp TCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHHHTTSCBCSCEEEEEECSTTS-CTTHHHHHHHTTB-
T ss_pred ccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccchhhcccchhhccccCcceEEEecCCC-CChhHHHHHHhhc-
Confidence 11 111123332222221111 011110 0000 0111268899999999988 3333333455544
Q ss_pred CCeEEEEEcc-CccccccChHHHHHHHhhhcccCCC
Q psy1119 1343 KPVKVHFVDG-NHFTVLDNIKSAQIIMHEDSTDFKT 1377 (1392)
Q Consensus 1343 g~v~v~~v~G-~H~~ml~~~~~~~i~~~l~~~L~~~ 1377 (1392)
..++++.++| +|+.++++|.. ++..|.+.|.+.
T Consensus 261 ~~~~~~~i~~~gH~~~~e~p~~--~~~~i~~~l~~~ 294 (301)
T 3kda_A 261 EDVEGHVLPGCGHWLPEECAAP--MNRLVIDFLSRG 294 (301)
T ss_dssp SSEEEEEETTCCSCHHHHTHHH--HHHHHHHHHTTS
T ss_pred ccCeEEEcCCCCcCchhhCHHH--HHHHHHHHHhhC
Confidence 3478999995 99999998864 344556666654
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=4.1e-10 Score=130.95 Aligned_cols=148 Identities=11% Similarity=0.087 Sum_probs=115.2
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
+++++||||+|+||.++++.|+++|.+ |+++.|+. .+|++|.+++.++++..
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~-v~~~~r~~-----------------------~~D~~d~~~~~~~~~~~---- 54 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDV-ELVLRTRD-----------------------ELNLLDSRAVHDFFASE---- 54 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTE-EEECCCTT-----------------------TCCTTCHHHHHHHHHHH----
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCe-EEEEecCc-----------------------cCCccCHHHHHHHHHhc----
Confidence 357999999999999999999999987 66666651 27999999998888754
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccC----------------
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRG---------------- 924 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G---------------- 924 (1392)
.+|.|||+|+..... ..+.+++...+++|+.|+.++.+++... ....||++||.+..-+
T Consensus 55 ~~d~vih~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~ 129 (321)
T 1e6u_A 55 RIDQVYLAAAKVGGI---VANNTYPADFIYQNMMIESNIIHAAHQN--DVNKLLFLGSSCIYPKLAKQPMAESELLQGTL 129 (321)
T ss_dssp CCSEEEECCCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred CCCEEEEcCeecCCc---chhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEccHHHcCCCCCCCcCccccccCCC
Confidence 689999999965321 1134456788999999999999888653 4569999999765421
Q ss_pred CCCChhHHHHHHHHHHHHHHHHH-cCCCeEEEEccccC
Q psy1119 925 NAGQTNYGMANSIMERICEARRA-EGLPGLAVEWGAVG 961 (1392)
Q Consensus 925 ~~gq~~Yaaana~ld~la~~r~~-~Glp~~ai~~g~~~ 961 (1392)
.+....|+.+|.+.+.+++..+. .|++.+.+..+.+-
T Consensus 130 ~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~ 167 (321)
T 1e6u_A 130 EPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLY 167 (321)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcC
Confidence 11235899999999999987544 48998888887653
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1.5e-09 Score=121.37 Aligned_cols=193 Identities=18% Similarity=0.244 Sum_probs=119.4
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCceEEEecC-------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechh
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD-------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFG 1228 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~-------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~G 1228 (1392)
.++||+|+|+.+|+...|.+++..|.....|+.++ ..++..+++++|+++.+.++.. .-.+++|+|||||
T Consensus 15 ~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~a~dl~~~l~~l---~~~~~~lvGhS~G 91 (255)
T 3bf7_A 15 NNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDVRNHGLSPREPVMNYPAMAQDLVDTLDAL---QIDKATFIGHSMG 91 (255)
T ss_dssp CCCCEEEECCTTCCTTTTHHHHHHHTTTSCEEEECCTTSTTSCCCSCCCHHHHHHHHHHHHHHH---TCSCEEEEEETHH
T ss_pred CCCCEEEEcCCcccHhHHHHHHHHHHhhCcEEEecCCCCCCCCCCCCcCHHHHHHHHHHHHHHc---CCCCeeEEeeCcc
Confidence 45799999999999999999999998778888876 1123468999999998888744 3468999999999
Q ss_pred HHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHh----cCCc---------cccCCHHHHHHH-
Q psy1119 1229 GMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLD----LMPE---------DATHSRTYQRNL- 1293 (1392)
Q Consensus 1229 g~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~----~~~~---------~~~~~~~~l~~~- 1293 (1392)
|.||+++|.+-- +.+ .|+++|+.|...... .+...+..+.. .... ....+......+
T Consensus 92 g~va~~~a~~~p---~~v~~lvl~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (255)
T 3bf7_A 92 GKAVMALTALAP---DRIDKLVAIDIAPVDYHVR-----RHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLL 163 (255)
T ss_dssp HHHHHHHHHHCG---GGEEEEEEESCCSSCCCSC-----CCHHHHHHHHHHHHSCCCSHHHHHHHHTTTCCCHHHHHHHH
T ss_pred HHHHHHHHHhCc---HhhccEEEEcCCcccCCcc-----cHHHHHHHHHhccccccccHHHHHHHHhhhcchhHHHHHHH
Confidence 999999997532 345 889998765321100 01111110000 0000 000111111111
Q ss_pred -----------HHHHHHHHHhhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-CccccccC
Q psy1119 1294 -----------AHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHFTVLDN 1360 (1392)
Q Consensus 1294 -----------~~~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~~ml~~ 1360 (1392)
...+...+.....+. ...++++|++++.+++|. ........+.+... ..+++.++| +|+.++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~ 240 (255)
T 3bf7_A 164 KSFVDGEWRFNVPVLWDQYPHIVGWE--KIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFP-QARAHVIAGAGHWVHAEK 240 (255)
T ss_dssp TTEETTEESSCHHHHHHTHHHHHCCC--CCCCCCSCEEEECBTTCSTTCGGGHHHHHHHCT-TEEECCBTTCCSCHHHHC
T ss_pred HhccCCceeecHHHHHhhhhhccccc--cccccCCCeEEEECCCCCCCCHHHHHHHHHHCC-CCeEEEeCCCCCccccCC
Confidence 011111122222221 123789999999998876 44333444555543 478889986 89999998
Q ss_pred hH
Q psy1119 1361 IK 1362 (1392)
Q Consensus 1361 ~~ 1362 (1392)
|.
T Consensus 241 p~ 242 (255)
T 3bf7_A 241 PD 242 (255)
T ss_dssp HH
T ss_pred HH
Confidence 85
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.09 E-value=7.5e-10 Score=123.17 Aligned_cols=199 Identities=14% Similarity=0.148 Sum_probs=124.3
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecC------C------CCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEe
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------H------TNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVG 1224 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~------e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G 1224 (1392)
+++|+|+|+.+++...|.++++.|.....++.++ . .....+++++++.+.+.++.. ...|++|+|
T Consensus 20 ~p~vv~~HG~~~~~~~~~~~~~~l~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G 96 (269)
T 4dnp_A 20 ERVLVLAHGFGTDQSAWNRILPFFLRDYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLLHILDAL---GIDCCAYVG 96 (269)
T ss_dssp SSEEEEECCTTCCGGGGTTTGGGGTTTCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHHHHHHHT---TCCSEEEEE
T ss_pred CCEEEEEeCCCCcHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHHHHHHhc---CCCeEEEEc
Confidence 3689999999999999999999998888888876 1 112238999999999888743 346899999
Q ss_pred echhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCcccc-CCCCC---hHHH-----------HHHHHhcCCccccCCHH
Q psy1119 1225 FSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSL-RKLPD---WNAK-----------LNYFLDLMPEDATHSRT 1288 (1392)
Q Consensus 1225 ~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l-~~~~~---~~~~-----------l~~~~~~~~~~~~~~~~ 1288 (1392)
|||||.+|+++|.+. ...+ .++++++.+....... ..... .... +..+..... .....+
T Consensus 97 hS~Gg~~a~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 171 (269)
T 4dnp_A 97 HSVSAMIGILASIRR---PELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAV--GADVPA 171 (269)
T ss_dssp ETHHHHHHHHHHHHC---TTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHH--CSSCHH
T ss_pred cCHHHHHHHHHHHhC---cHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhhc--cCCChh
Confidence 999999999998763 3345 7888888654321110 00000 0111 111111000 001222
Q ss_pred HHHHHHHHHH--------HHHHhhccccCC-CCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEc-cCcccc
Q psy1119 1289 YQRNLAHAAY--------KRITSILKYTDP-KHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVD-GNHFTV 1357 (1392)
Q Consensus 1289 ~l~~~~~~~~--------~~~~~~~~y~~~-~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~-G~H~~m 1357 (1392)
....+...+. ........+... ...++++|++++.++.|. ........|.+...+.++++.++ ++|+.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 251 (269)
T 4dnp_A 172 AVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGGKNTVHWLNIEGHLPH 251 (269)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHSSSCEEEEEEEEESSCHH
T ss_pred HHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhCCCCceEEEeCCCCCCcc
Confidence 2222222111 111122222221 234678999999999887 44455556777666668999999 699999
Q ss_pred ccChHH
Q psy1119 1358 LDNIKS 1363 (1392)
Q Consensus 1358 l~~~~~ 1363 (1392)
++++..
T Consensus 252 ~~~p~~ 257 (269)
T 4dnp_A 252 LSAPTL 257 (269)
T ss_dssp HHCHHH
T ss_pred ccCHHH
Confidence 988753
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.08 E-value=5.6e-10 Score=126.84 Aligned_cols=212 Identities=15% Similarity=0.081 Sum_probs=127.3
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCC-------CCCHHHHHHHHHHHHhhhccCCCCcEE
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNP-------PDTIPEMADSLLPHFKKRLVHGTDEIK 1221 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~-------~~sieelA~~y~~~I~~~q~qp~gPy~ 1221 (1392)
|.++||+|+|+.+|+...|.+++..|.....++.++ ...+ ..+++++++++.+.++.. +..|++
T Consensus 31 g~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~ 107 (306)
T 3r40_A 31 GDGPPLLLLHGFPQTHVMWHRVAPKLAERFKVIVADLPGYGWSDMPESDEQHTPYTKRAMAKQLIEAMEQL---GHVHFA 107 (306)
T ss_dssp ECSSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTSCCCCCCTTCGGGSHHHHHHHHHHHHHHT---TCSSEE
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHhccCCeEEEeCCCCCCCCCCCCCCcccCCCCHHHHHHHHHHHHHHh---CCCCEE
Confidence 456899999999999999999999998888888876 1111 348999999998888743 456899
Q ss_pred EEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccc---------------cCC---------CCChHHHHHHHH
Q psy1119 1222 LVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTS---------------LRK---------LPDWNAKLNYFL 1276 (1392)
Q Consensus 1222 L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~---------------l~~---------~~~~~~~l~~~~ 1276 (1392)
|+||||||.+|+++|.+. ...+ .++++++.|...... ... .......+..++
T Consensus 108 lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (306)
T 3r40_A 108 LAGHNRGARVSYRLALDS---PGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFLAQPAPLPENLLGGDPDFYVKAKL 184 (306)
T ss_dssp EEEETHHHHHHHHHHHHC---GGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHHHTSCTTHHHHHHTSCHHHHHHHHH
T ss_pred EEEecchHHHHHHHHHhC---hhhccEEEEecCCCCccchhhhhhhhhhhhHHHHHhhcccchHHHHHcCCHHHHHHHHh
Confidence 999999999999999863 2345 788998755321000 000 011122233332
Q ss_pred hcCCc---cccCCHHHHHHHHHHHH---------HHHHhhccccCC-------CCCcccceEEEEeeCCCC-CC-Chhhc
Q psy1119 1277 DLMPE---DATHSRTYQRNLAHAAY---------KRITSILKYTDP-------KHKAFGGNITLLRPTEQA-LP-TAEDY 1335 (1392)
Q Consensus 1277 ~~~~~---~~~~~~~~l~~~~~~~~---------~~~~~~~~y~~~-------~~~~~~~pi~l~~a~~~~-~~-~~~~~ 1335 (1392)
..... ....+++.++.+...+. ..++....+... ...++++|++++.+++|. .. .....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~ 264 (306)
T 3r40_A 185 ASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKIPVPMLALWGASGIAQSAATPLD 264 (306)
T ss_dssp HHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCBCSCEEEEEETTCC------CHH
T ss_pred hcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhcccccchhhhhhhhhccCCCcceEEEEecCCcccCchhHHH
Confidence 22111 11123333332222111 111111111000 123789999999999987 33 23334
Q ss_pred CcccccCCCeEEEEEccCccccccChHHHHHHHhhhcccC
Q psy1119 1336 GLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDSTDF 1375 (1392)
Q Consensus 1336 ~W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~~~L~ 1375 (1392)
.|.+.. ...+++.++|+|+.+++++.. +...+...|.
T Consensus 265 ~~~~~~-~~~~~~~~~~gH~~~~e~p~~--~~~~i~~fl~ 301 (306)
T 3r40_A 265 VWRKWA-SDVQGAPIESGHFLPEEAPDQ--TAEALVRFFS 301 (306)
T ss_dssp HHHHHB-SSEEEEEESSCSCHHHHSHHH--HHHHHHHHHH
T ss_pred HHHhhc-CCCeEEEecCCcCchhhChHH--HHHHHHHHHH
Confidence 455554 457788889999999988853 3334444443
|
| >3hrq_A PKS, aflatoxin biosynthesis polyketide synthase; hot-DOG fold, iterative type I PKS, norsolorinic acid, product template domain; HET: PLM; 1.80A {Aspergillus parasiticus} PDB: 3hrr_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=8.6e-10 Score=130.61 Aligned_cols=217 Identities=11% Similarity=0.086 Sum_probs=141.2
Q ss_pred cccccceeeeeeeeccCCCCceeEeeccccCCCCcc-cccccchh-hHH----HHHHHHHHHHHHH---cCCCCccC---
Q psy1119 14 VKRDTDVHIGTLLKEAPRKGLVQLKNSFRSLSASPK-RLASTALD-RVY----QRFQMAWETVSLM---RGELYTEV--- 81 (1392)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~gh~id-r~l----~yl~l~W~t~a~~---~~~~~~~~--- 81 (1392)
...-|-+|--.-+...+.++...+++|++ ..+.. ||.||+|+ .+| ||+.++.+....+ .+......
T Consensus 3 ~~~t~~~~~~~~~~~~~~~~~~~f~~~~~--~~~~~pwL~dH~V~g~~v~P~agyl~mAleAa~~~~~~~~~~~~~~~~~ 80 (357)
T 3hrq_A 3 IKTTTTLHRVVEETTKPLGATLVVETDIS--RKDVNGLARGHLVDGIPLCTPSFYADIAMQVGQYSMQRLRAGHPGAGAI 80 (357)
T ss_dssp CCCCSSCCEEEEEEEETTEEEEEEEEETT--STTTHHHHCCEEETTEEECCHHHHHHHHHHHHHHHHHHCC---------
T ss_pred ccccCceEEEEEeeecCCCcEEEEEECCC--CHHHHHHhcCCeECCeeccCHHHHHHHHHHHHHHHHHhcCCCccccccc
Confidence 34455566332233346778888999999 55554 99999999 888 9999999986543 22222222
Q ss_pred --CEEeeeeeeeeeeeeCCCCeEEEEEEEEe--------c--cccEEEee----C--CcEEEEEEEEccCCccccccc--
Q psy1119 82 --PVVFENIKFMRATNVPKEGSVEFIVMVQK--------G--SGNFEIVE----G--GAAIVTGKVYIPADVKTEMVR-- 141 (1392)
Q Consensus 82 --pv~fe~v~~~rat~l~~~~~v~~~v~i~~--------~--sg~Fei~~----~--~~~vvsG~i~~~~~~~~~~~~-- 141 (1392)
.+.++||.|+++-+++.++.+.+.+.+.. . +-.|+|.- + -..-++|+|+..+........
T Consensus 81 ~~~~~l~dv~i~~pLvl~~~~~~~l~l~~~~~~~~~~~~~~~~~~f~i~S~~~~~~~w~~Ha~G~v~~~~~~~~~~~~~~ 160 (357)
T 3hrq_A 81 DGLVDVSDMVVDKALVPHGKGPQLLRTTLTMEWPPKAAATTRSAKVKFATYFADGKLDTEHASCTVRFTSDAQLKSLRRS 160 (357)
T ss_dssp -CEEEEEEEEECSCCCCCCSSCCEEEEEEEEECSTTCGGGCCEEEEEEEEEC----CCEEEEEEEEEEECSHHHHHHHHT
T ss_pred cCCceEeeeEeecCeEcCCCCCeEEEEEEeecccccccCCCceEEEEEEEEcCCCCceEEEEEEEEEEcCHHHHHHHHHh
Confidence 57899999999999998665666666652 1 23788863 2 346789999874311000000
Q ss_pred ---CCCCCCCCC---CCcccccCChhhHHHHHHhcCCccCccccceeeeccC----CceeEEEec-----ccc---hhhh
Q psy1119 142 ---IPDQYKIPR---TEGEAIELQSRDIYKELRLRGYHYKGLFRSLNVADGA----GTQGKIRWH-----NNW---VAFM 203 (1392)
Q Consensus 142 ---~~~~~~~~~---~~~~~~~l~~~diYkel~lrGy~y~~~F~~i~~~~~~----g~~g~i~W~-----~nW---v~f~ 203 (1392)
++....... .......++.+++|+.| -+||+||+.||||.+.... ...|.|... +.| -+.|
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~~v~~~~~Y~~~-~~g~~YGp~Fq~l~~i~~~~~~~ea~a~v~lp~~~~~~~~~lHPa~L 239 (357)
T 3hrq_A 161 VSEYKTHIRQLHDGHAKGQFMRYNRKTGYKLM-SSMARFNPDYMLLDYLVLNEAENEAASGVDFSLGSSEGTFAAHPAHV 239 (357)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEHHHHHHHH-TTTCEECGGGCCEEEEEEEGGGTEEEEEEEGGGSCCCSCCSSCHHHH
T ss_pred HHHHHHHHHHHHhhhcCCCceEecHHHHHHHh-hhhceeChhhcChhheeecCCCCEEEEEEECCCCCCCCcEEEChHHH
Confidence 000000000 00012358899999988 6899999999999988543 345777764 345 4689
Q ss_pred hhhhheecccc-------CCCceecccceeeEEEcch
Q psy1119 204 DNMLQLQILQY-------DTRGLFVPTSIQKLVINVS 233 (1392)
Q Consensus 204 d~mlQ~~il~~-------~~~~l~~Pt~i~~~~i~p~ 233 (1392)
|++||+..+.. ....+|||++|+++.|.+.
T Consensus 240 Da~lQ~~~~~~~~~~~~~~~~~~~vP~~i~~l~i~~~ 276 (357)
T 3hrq_A 240 DAITQVAGFAMNANDNVDIEKQVYVNHGWDSFQIYQP 276 (357)
T ss_dssp HHHHHHHHHHHHTSTTCCTTTEEEEEEEEEEEEECSC
T ss_pred HHHHHHHHHHhhCcCCCCCCccEEEEcccceEEEccC
Confidence 99999854321 1367999999999999864
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.07 E-value=2.2e-09 Score=119.98 Aligned_cols=207 Identities=15% Similarity=0.158 Sum_probs=118.2
Q ss_pred CCc-eeEeecCCCccccccHHHHhhcCCceEEEecC-------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1156 NNN-TIFMVPGIEGIATVLEPLAKNINAQVLVFQFD-------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1156 ~~~-pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~-------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
.++ ||+|+|+.+++...|.+++..|.....|+.++ ..+...+++++++.+.+ . . + .|++|+||||
T Consensus 11 ~g~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~~----~-l-~-~~~~lvGhS~ 83 (258)
T 1m33_A 11 QGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQ----Q-A-P-DKAIWLGWSL 83 (258)
T ss_dssp CCSSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTCCSCCCCCHHHHHHHHHT----T-S-C-SSEEEEEETH
T ss_pred CCCCeEEEECCCCCChHHHHHHHHHhhcCcEEEEeeCCCCCCCCCCCCcCHHHHHHHHHH----H-h-C-CCeEEEEECH
Confidence 346 99999999999999999999998778888876 11124588887765533 3 2 2 6899999999
Q ss_pred hHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCcccc-CCCCC--hHHH-----------HHHHHhcCCccccCCHHHHHH
Q psy1119 1228 GGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSL-RKLPD--WNAK-----------LNYFLDLMPEDATHSRTYQRN 1292 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l-~~~~~--~~~~-----------l~~~~~~~~~~~~~~~~~l~~ 1292 (1392)
||.||.++|.+.. +.+ .|+++|+.|....... ..... .... +..+............+..+.
T Consensus 84 Gg~va~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (258)
T 1m33_A 84 GGLVASQIALTHP---ERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARA 160 (258)
T ss_dssp HHHHHHHHHHHCG---GGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTTHHHHHHH
T ss_pred HHHHHHHHHHHhh---HhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHHHhcCCccchhhHHH
Confidence 9999999998643 245 8899998764321110 00100 0000 111111100000011111111
Q ss_pred HHH-----------HHHHHHHhhccccC-CCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-Cccccc
Q psy1119 1293 LAH-----------AAYKRITSILKYTD-PKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHFTVL 1358 (1392)
Q Consensus 1293 ~~~-----------~~~~~~~~~~~y~~-~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~~ml 1358 (1392)
+.. .+...+.....+.. ....++++|++++.+++|. ........+.+.. ...+++.++| +|+.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~ 239 (258)
T 1m33_A 161 LKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAHAPFI 239 (258)
T ss_dssp HHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTC-TTCEEEEETTCCSCHHH
T ss_pred HHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHHHHhC-ccceEEEeCCCCCCccc
Confidence 111 11111112222221 1234688999999999987 3333333344433 3468889985 999999
Q ss_pred cChHHHHHHHhhhcccC
Q psy1119 1359 DNIKSAQIIMHEDSTDF 1375 (1392)
Q Consensus 1359 ~~~~~~~i~~~l~~~L~ 1375 (1392)
++|. .....+...|.
T Consensus 240 e~p~--~~~~~i~~fl~ 254 (258)
T 1m33_A 240 SHPA--EFCHLLVALKQ 254 (258)
T ss_dssp HSHH--HHHHHHHHHHT
T ss_pred cCHH--HHHHHHHHHHH
Confidence 8875 33444444443
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.3e-09 Score=122.87 Aligned_cols=194 Identities=13% Similarity=0.185 Sum_probs=121.7
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecC------CC--CCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechh
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HT--NPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFG 1228 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e--~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~G 1228 (1392)
++||+|+|+.+++...|.+++..|.....|+.++ .. ....+++++|+++.+.+... ...|++|+|||||
T Consensus 26 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l---~~~~~~lvGhS~G 102 (266)
T 2xua_A 26 APWIVLSNSLGTDLSMWAPQVAALSKHFRVLRYDTRGHGHSEAPKGPYTIEQLTGDVLGLMDTL---KIARANFCGLSMG 102 (266)
T ss_dssp CCEEEEECCTTCCGGGGGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHHT---TCCSEEEEEETHH
T ss_pred CCeEEEecCccCCHHHHHHHHHHHhcCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc---CCCceEEEEECHH
Confidence 5789999999999999999999998778888886 11 12358999999998888743 3458999999999
Q ss_pred HHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHH------------HHHHHh-cCCccc-cCCHHHHHHH
Q psy1119 1229 GMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAK------------LNYFLD-LMPEDA-THSRTYQRNL 1293 (1392)
Q Consensus 1229 g~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~------------l~~~~~-~~~~~~-~~~~~~l~~~ 1293 (1392)
|.||+++|.+.. +.+ .|+++++.+..... ..|... ...... .+.... ..+++..+.+
T Consensus 103 g~va~~~A~~~p---~~v~~lvl~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (266)
T 2xua_A 103 GLTGVALAARHA---DRIERVALCNTAARIGSP-----EVWVPRAVKARTEGMHALADAVLPRWFTADYMEREPVVLAMI 174 (266)
T ss_dssp HHHHHHHHHHCG---GGEEEEEEESCCSSCSCH-----HHHHHHHHHHHHHCHHHHHHHHHHHHSCHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHhCh---hhhheeEEecCCCCCCch-----HHHHHHHHHHHhcChHHHHHHHHHHHcCcccccCCHHHHHHH
Confidence 999999998643 346 88999886532110 001111 111110 011100 0011111111
Q ss_pred HHH--------HHHHHHhhccccCC-CCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEccCccccccChH
Q psy1119 1294 AHA--------AYKRITSILKYTDP-KHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIK 1362 (1392)
Q Consensus 1294 ~~~--------~~~~~~~~~~y~~~-~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G~H~~ml~~~~ 1362 (1392)
... +...+.....+... ....+++|++++.+++|. ...+....|.+...+ .+++.++++|+.++++|.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~e~p~ 252 (266)
T 2xua_A 175 RDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQAIAG-ARYVELDASHISNIERAD 252 (266)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTT-CEEEEESCCSSHHHHTHH
T ss_pred HHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHhCCC-CEEEEecCCCCchhcCHH
Confidence 111 11112222222221 234688999999999987 444444556665544 588889999999998875
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.05 E-value=2.3e-10 Score=142.19 Aligned_cols=162 Identities=15% Similarity=0.073 Sum_probs=122.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc---------CCceEEEEeccCCCHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS---------YDVQVLISTDDITTEAGVV 850 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~---------~G~~v~~~~~Dv~~~~~v~ 850 (1392)
+.+++|||||+|.||..+++.|.++|++ |+.+.|+...........+.++. .+.++.++.+|+++++.+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~-V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHR-IYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEE-EEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCE-EEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence 3478999999999999999999888986 77788886543333333222221 2356888999999987766
Q ss_pred HHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC-----
Q psy1119 851 NLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN----- 925 (1392)
Q Consensus 851 ~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~----- 925 (1392)
....+|.|||+|+... ....+....++|+.|+.++.+++.. ....||++||.+. |.
T Consensus 228 -------~~~~~D~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~---~~~~~v~iSS~~v--G~~~~~~ 288 (508)
T 4f6l_B 228 -------LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISV--GTYFDID 288 (508)
T ss_dssp -------CSSCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT---TTCEEEEEEESCT--TSEECTT
T ss_pred -------CccCCCEEEECCceec-------CCCCHHHHhhhHHHHHHHHHHHHHh---CCCcEEEeCChhh--ccCCccC
Confidence 4468999999999753 1245677888999999999998865 4578999999887 22
Q ss_pred ---------------CCChhHHHHHHHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 926 ---------------AGQTNYGMANSIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 926 ---------------~gq~~Yaaana~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
.....|+.+|...+.+++..+..|++...+..|.+-
T Consensus 289 ~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~ 339 (508)
T 4f6l_B 289 TEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLT 339 (508)
T ss_dssp CSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEE
T ss_pred CcCcccccccccccccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceec
Confidence 145789999999999999887789999999887764
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.05 E-value=2.1e-09 Score=121.39 Aligned_cols=197 Identities=10% Similarity=0.173 Sum_probs=122.9
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCceEEEecC------CC--CCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HT--NPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e--~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
.++||+++|+.+++...|.++...|.....|+.++ .. ....+++++|+++.+.+... .-.+++|+||||
T Consensus 26 ~~p~lvl~hG~~~~~~~w~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~lvGhS~ 102 (266)
T 3om8_A 26 EKPLLALSNSIGTTLHMWDAQLPALTRHFRVLRYDARGHGASSVPPGPYTLARLGEDVLELLDAL---EVRRAHFLGLSL 102 (266)
T ss_dssp TSCEEEEECCTTCCGGGGGGGHHHHHTTCEEEEECCTTSTTSCCCCSCCCHHHHHHHHHHHHHHT---TCSCEEEEEETH
T ss_pred CCCEEEEeCCCccCHHHHHHHHHHhhcCcEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCceEEEEECh
Confidence 35789999999999999999999998888888886 11 12358999999999888744 346899999999
Q ss_pred hHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHH-------------Hh-cCCccc-cCCHHHHH
Q psy1119 1228 GGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYF-------------LD-LMPEDA-THSRTYQR 1291 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~-------------~~-~~~~~~-~~~~~~l~ 1291 (1392)
||.||.++|.+-- +.+ .|+++++.+.... ...|...+..+ +. .+.... ...++..+
T Consensus 103 Gg~va~~~A~~~P---~rv~~lvl~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (266)
T 3om8_A 103 GGIVGQWLALHAP---QRIERLVLANTSAWLGP-----AAQWDERIAAVLQAEDMSETAAGFLGNWFPPALLERAEPVVE 174 (266)
T ss_dssp HHHHHHHHHHHCG---GGEEEEEEESCCSBCCC-----SHHHHHHHHHHHHCSSSHHHHHHHHHHHSCHHHHHSCCHHHH
T ss_pred HHHHHHHHHHhCh---HhhheeeEecCcccCCc-----hhHHHHHHHHHHccccHHHHHHHHHHHhcChhhhhcChHHHH
Confidence 9999999997532 346 8999988653210 01122111111 11 111100 00111111
Q ss_pred HHHH--------HHHHHHHhhccccCC-CCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEccCccccccCh
Q psy1119 1292 NLAH--------AAYKRITSILKYTDP-KHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNI 1361 (1392)
Q Consensus 1292 ~~~~--------~~~~~~~~~~~y~~~-~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G~H~~ml~~~ 1361 (1392)
.+.. .+...+.+...+... ....+++|++++.+++|. ........+.+... ..+++.++|+|+.++++|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~l~~~ip-~a~~~~i~~gH~~~~e~p 253 (266)
T 3om8_A 175 RFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIA-GARLVTLPAVHLSNVEFP 253 (266)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHHHHHHHHHHST-TCEEEEESCCSCHHHHCH
T ss_pred HHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-CCEEEEeCCCCCccccCH
Confidence 1111 111122222222221 234789999999999987 43333344445444 357888899999999998
Q ss_pred HHH
Q psy1119 1362 KSA 1364 (1392)
Q Consensus 1362 ~~~ 1364 (1392)
...
T Consensus 254 ~~~ 256 (266)
T 3om8_A 254 QAF 256 (266)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=99.04 E-value=2.8e-09 Score=120.31 Aligned_cols=202 Identities=15% Similarity=0.235 Sum_probs=123.4
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCceEEEecC------C-CC--CCCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------H-TN--PPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~-e~--~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
+++||+|+|+.+|+...|.++...|.....|+.++ . .+ ...+++++|+++.+.+... +..+++|+|||
T Consensus 14 ~~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~lvGhS 90 (268)
T 3v48_A 14 DAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAA---GIEHYAVVGHA 90 (268)
T ss_dssp TCCEEEEECCTTCCGGGGHHHHHHHHTTSEEEECCCTTBTTBCCCCCTTCCHHHHHHHHHHHHHHT---TCCSEEEEEET
T ss_pred CCCEEEEeCCCCccHHHHHHHHHHHhhcCeEEEECCCCCCCCCCCccccCCHHHHHHHHHHHHHHc---CCCCeEEEEec
Confidence 46899999999999999999999998888898886 1 11 2358999999999888743 45689999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHH-----HHHHHh-----cCCccc-cCCHHHHH---
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAK-----LNYFLD-----LMPEDA-THSRTYQR--- 1291 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~-----l~~~~~-----~~~~~~-~~~~~~l~--- 1291 (1392)
|||.||+++|.+. -+.+ .|+++++.+................ ...+.. ..+... ......+.
T Consensus 91 ~GG~ia~~~A~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (268)
T 3v48_A 91 LGALVGMQLALDY---PASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAED 167 (268)
T ss_dssp HHHHHHHHHHHHC---TTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHhC---hhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhhcccccchhhH
Confidence 9999999999753 3445 7889987543210000000000000 000000 001000 00000000
Q ss_pred --HH-----HHHHHHHHHhhccccC-CCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEc-cCccccccCh
Q psy1119 1292 --NL-----AHAAYKRITSILKYTD-PKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVD-GNHFTVLDNI 1361 (1392)
Q Consensus 1292 --~~-----~~~~~~~~~~~~~y~~-~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~-G~H~~ml~~~ 1361 (1392)
.. ...+...+.....+.. .....+++|++++.+++|. ........|.+...+ .+.+.++ ++|+.++++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~p~-~~~~~~~~~GH~~~~e~p 246 (268)
T 3v48_A 168 ALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPD-SQKMVMPYGGHACNVTDP 246 (268)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHCSS-EEEEEESSCCTTHHHHCH
T ss_pred HHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhCCc-CeEEEeCCCCcchhhcCH
Confidence 00 0111122222222222 1234789999999999997 555555566666544 6788888 6999999998
Q ss_pred HHH
Q psy1119 1362 KSA 1364 (1392)
Q Consensus 1362 ~~~ 1364 (1392)
...
T Consensus 247 ~~~ 249 (268)
T 3v48_A 247 ETF 249 (268)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.02 E-value=2.7e-09 Score=118.79 Aligned_cols=198 Identities=13% Similarity=0.199 Sum_probs=122.8
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCC--ceEEEecC-------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINA--QVLVFQFD-------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~--~~~v~~l~-------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
|.++||+|+|+.+|+...|.+++..|.. .+.++.++ ..+...+++++++.+.+.++... +.+|+.|+||
T Consensus 19 g~~~~vv~lhG~~~~~~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~l~G~ 96 (272)
T 3fsg_A 19 GSGTPIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISPSTSDNVLETLIEAIEEII--GARRFILYGH 96 (272)
T ss_dssp CCSSEEEEECCTTCCHHHHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSSCSHHHHHHHHHHHHHHHH--TTCCEEEEEE
T ss_pred CCCCeEEEEeCCCCcHHHHHHHHHHHhccCceEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHh--CCCcEEEEEe
Confidence 4568999999999999999999999986 78888876 11112699999999999887522 5679999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCc-------------cccCCCCChHHHHHHHHhcCCccccCCHHHHH
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVL-------------TSLRKLPDWNAKLNYFLDLMPEDATHSRTYQR 1291 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~-------------~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 1291 (1392)
||||.+|+++|.+.. ..+ .++++++...... ........ ......+...... .......
T Consensus 97 S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~ 169 (272)
T 3fsg_A 97 SYGGYLAQAIAFHLK---DQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVEN-KEYFADFLSMNVI---INNQAWH 169 (272)
T ss_dssp EHHHHHHHHHHHHSG---GGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTT-GGGHHHHHHHCSE---ESHHHHH
T ss_pred CchHHHHHHHHHhCh---HhhheeEEECcccccCccccccccchhhhhhhhhcccC-HHHHHHHHHHhcc---CCCchhH
Confidence 999999999997643 235 7888877532110 00000000 1111122111111 1111111
Q ss_pred HHHHH-----------HHHHHHhhccccCC---CCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-Ccc
Q psy1119 1292 NLAHA-----------AYKRITSILKYTDP---KHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHF 1355 (1392)
Q Consensus 1292 ~~~~~-----------~~~~~~~~~~y~~~---~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~ 1355 (1392)
.+... +...+.....+... ...++++|++++.+++|. ........|.+... ..+++.++| +|+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~ 248 (272)
T 3fsg_A 170 DYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNE-NGEIVLLNRTGHN 248 (272)
T ss_dssp HHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHHHHHTTCT-TEEEEEESSCCSS
T ss_pred HHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHHHHHHHhcC-CCeEEEecCCCCC
Confidence 11111 11111111112111 124689999999999987 55555555665543 578999996 999
Q ss_pred ccccChH
Q psy1119 1356 TVLDNIK 1362 (1392)
Q Consensus 1356 ~ml~~~~ 1362 (1392)
.+++++.
T Consensus 249 ~~~~~~~ 255 (272)
T 3fsg_A 249 LMIDQRE 255 (272)
T ss_dssp HHHHTHH
T ss_pred chhcCHH
Confidence 9998774
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.02 E-value=9.1e-10 Score=125.94 Aligned_cols=139 Identities=17% Similarity=0.103 Sum_probs=110.1
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
++|||||+|+||.++++.|+++|++ |+.++|. .+|++|.+++.++++.. .+
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~------------------------~~D~~d~~~~~~~~~~~----~~ 57 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYD-IYPFDKK------------------------LLDITNISQVQQVVQEI----RP 57 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEE-EEEECTT------------------------TSCTTCHHHHHHHHHHH----CC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCE-EEEeccc------------------------ccCCCCHHHHHHHHHhc----CC
Confidence 7999999999999999999999986 8888882 38999999999988765 68
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC-----------CChhH
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA-----------GQTNY 931 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~-----------gq~~Y 931 (1392)
|.|||+|+...... +.+++...+++|+.|+.++.+++... .. .||++||.+..-+.. ..+.|
T Consensus 58 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y 130 (287)
T 3sc6_A 58 HIIIHCAAYTKVDQ----AEKERDLAYVINAIGARNVAVASQLV--GA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIY 130 (287)
T ss_dssp SEEEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHHHHH--TC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHH
T ss_pred CEEEECCcccChHH----HhcCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHH
Confidence 99999999764211 12467889999999999999988765 22 699999986543322 25789
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEEEcccc
Q psy1119 932 GMANSIMERICEARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~r~~~Glp~~ai~~g~~ 960 (1392)
+.+|...+.+++... .+...+..+.+
T Consensus 131 ~~sK~~~E~~~~~~~---~~~~ilR~~~v 156 (287)
T 3sc6_A 131 GASKYAGEQFVKELH---NKYFIVRTSWL 156 (287)
T ss_dssp HHHHHHHHHHHHHHC---SSEEEEEECSE
T ss_pred HHHHHHHHHHHHHhC---CCcEEEeeeee
Confidence 999999999998753 35566666554
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=7.7e-10 Score=127.29 Aligned_cols=142 Identities=17% Similarity=0.110 Sum_probs=110.4
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
+++||||+|.||.++++.|+ +|.+ |+.++|+.. .+.+|++|.+++.++++.. ++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~-V~~~~r~~~--------------------~~~~D~~d~~~~~~~~~~~----~~ 55 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGN-LIALDVHSK--------------------EFCGDFSNPKGVAETVRKL----RP 55 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSE-EEEECTTCS--------------------SSCCCTTCHHHHHHHHHHH----CC
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCe-EEEeccccc--------------------cccccCCCHHHHHHHHHhc----CC
Confidence 58999999999999999999 8986 788888741 2478999999999888764 68
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC-----------ChhH
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG-----------QTNY 931 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g-----------q~~Y 931 (1392)
|.|||+|+..... .+.+++...++.|+.|+.++.+++... .. .||++||.+..-+..+ ...|
T Consensus 56 d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y 128 (299)
T 1n2s_A 56 DVIVNAAAHTAVD----KAESEPELAQLLNATSVEAIAKAANET--GA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVY 128 (299)
T ss_dssp SEEEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHTTT--TC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred CEEEECcccCCHh----hhhcCHHHHHHHHHHHHHHHHHHHHHc--CC-cEEEEecccEEeCCCCCCCCCCCCCCCccHH
Confidence 9999999964321 122456788999999999999988653 22 7999999865433322 5689
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEEEcccc
Q psy1119 932 GMANSIMERICEARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~r~~~Glp~~ai~~g~~ 960 (1392)
+.+|...+.+++... .+...+..+.+
T Consensus 129 ~~sK~~~E~~~~~~~---~~~~ilRp~~v 154 (299)
T 1n2s_A 129 GKTKLAGEKALQDNC---PKHLIFRTSWV 154 (299)
T ss_dssp HHHHHHHHHHHHHHC---SSEEEEEECSE
T ss_pred HHHHHHHHHHHHHhC---CCeEEEeeeee
Confidence 999999999998643 37777776664
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.8e-09 Score=124.88 Aligned_cols=151 Identities=15% Similarity=0.047 Sum_probs=111.7
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
..+++|||||+|.||.++++.|.++|. +... ....+..+.+|++|.+++.++++..
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~~~~--------------~~~~~~~~~~D~~d~~~~~~~~~~~--- 60 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGAG-------LPGE--------------DWVFVSSKDADLTDTAQTRALFEKV--- 60 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTTC-------CTTC--------------EEEECCTTTCCTTSHHHHHHHHHHS---
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcCC-------cccc--------------cccccCceecccCCHHHHHHHHhhc---
Confidence 467899999999999999999999997 1110 0112333578999999999888753
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccC---------------
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRG--------------- 924 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G--------------- 924 (1392)
++|.|||+|+....... +.+++...+++|+.|+.+|.+++... ....||++||.+..-.
T Consensus 61 -~~d~Vih~A~~~~~~~~---~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~ 134 (319)
T 4b8w_A 61 -QPTHVIHLAAMVGGLFR---NIKYNLDFWRKNVHMNDNVLHSAFEV--GARKVVSCLSTCIFPDKTTYPIDETMIHNGP 134 (319)
T ss_dssp -CCSEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEECCGGGSCSSCCSSBCGGGGGBSC
T ss_pred -CCCEEEECceecccccc---cccCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEEcchhhcCCCCCCCccccccccCC
Confidence 69999999997432111 22345677899999999999988654 4568999999854321
Q ss_pred -CCCChhHHHHHHHHHHHHHHHHH-cCCCeEEEEcccc
Q psy1119 925 -NAGQTNYGMANSIMERICEARRA-EGLPGLAVEWGAV 960 (1392)
Q Consensus 925 -~~gq~~Yaaana~ld~la~~r~~-~Glp~~ai~~g~~ 960 (1392)
.+....|+.+|...+.+++.... .|++.+.+..+.+
T Consensus 135 ~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v 172 (319)
T 4b8w_A 135 PHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNV 172 (319)
T ss_dssp CCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEE
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccc
Confidence 11223599999999999876544 4999888887765
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.00 E-value=2.3e-09 Score=120.75 Aligned_cols=200 Identities=15% Similarity=0.139 Sum_probs=119.3
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCC---CCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNP---PDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~---~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
|.++||+|+|+.+|+...|.++++.|.....|+.++ ...+ ..+++++|+++.+.++.. ...|++|+||
T Consensus 14 G~g~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~l~~l---~~~~~~lvGh 90 (269)
T 2xmz_A 14 ETNQVLVFLHGFLSDSRTYHNHIEKFTDNYHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDKY---KDKSITLFGY 90 (269)
T ss_dssp CCSEEEEEECCTTCCGGGGTTTHHHHHTTSEEEEECCTTSTTCCCCTTSCCCHHHHHHHHHHHHGGG---TTSEEEEEEE
T ss_pred CCCCeEEEEcCCCCcHHHHHHHHHHHhhcCeEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHc---CCCcEEEEEE
Confidence 455799999999999999999999998778888876 1222 348999999998888743 3568999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccC-----CCCChHHHH-----HHHHhcC-Ccc-cc----CCHH
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLR-----KLPDWNAKL-----NYFLDLM-PED-AT----HSRT 1288 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~-----~~~~~~~~l-----~~~~~~~-~~~-~~----~~~~ 1288 (1392)
||||.||+++|.+ ..+.+ .|+++++.+........ ....+...+ ..+.... ... .. .+.+
T Consensus 91 S~Gg~va~~~a~~---~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (269)
T 2xmz_A 91 SMGGRVALYYAIN---GHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQLELPVE 167 (269)
T ss_dssp THHHHHHHHHHHH---CSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTSGGGGGGGGSCHH
T ss_pred CchHHHHHHHHHh---CchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHHHHhCccccccccCCHH
Confidence 9999999999986 33456 89999875532110000 000000000 1111100 000 00 1222
Q ss_pred HHHHHHHH--------HHHHHHhh---cccc-CCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-Cc
Q psy1119 1289 YQRNLAHA--------AYKRITSI---LKYT-DPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NH 1354 (1392)
Q Consensus 1289 ~l~~~~~~--------~~~~~~~~---~~y~-~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H 1354 (1392)
....+... +...+... ..+. .....++++|++++.+++|. ....... +.+.. ...+++.++| +|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~-~~~~~~~i~~~gH 245 (269)
T 2xmz_A 168 IQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKK-MANLI-PNSKCKLISATGH 245 (269)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHHH-HHHHS-TTEEEEEETTCCS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHHH-HHhhC-CCcEEEEeCCCCC
Confidence 22111110 01111111 1111 11234678999999999886 3222222 55544 3578999986 99
Q ss_pred cccccChH
Q psy1119 1355 FTVLDNIK 1362 (1392)
Q Consensus 1355 ~~ml~~~~ 1362 (1392)
+.++++|.
T Consensus 246 ~~~~e~p~ 253 (269)
T 2xmz_A 246 TIHVEDSD 253 (269)
T ss_dssp CHHHHSHH
T ss_pred ChhhcCHH
Confidence 99998875
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.00 E-value=2e-09 Score=122.94 Aligned_cols=143 Identities=10% Similarity=0.045 Sum_probs=109.3
Q ss_pred CeEEEEcCcchHHHHHHHHHHHh--CCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 782 KSYIICGGLGGFGLELADWLVLR--GARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~--GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
++++||||+|+||.++++.|+++ |++ |+.++|+..... .+...+ +.++.+|++|.+++.++++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~-------~l~~~~--~~~~~~D~~d~~~l~~~~~----- 65 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQ-IIAIVRNVEKAS-------TLADQG--VEVRHGDYNQPESLQKAFA----- 65 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGG-EEEEESCTTTTH-------HHHHTT--CEEEECCTTCHHHHHHHTT-----
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCe-EEEEEcCHHHHh-------HHhhcC--CeEEEeccCCHHHHHHHHh-----
Confidence 36899999999999999999999 886 777888754322 122234 4567899999998887664
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIME 939 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld 939 (1392)
.+|.|||+|+... . + ..++.++.++.+++... ...+||++||.+.. . ....|+.+|...+
T Consensus 66 -~~d~vi~~a~~~~-------~-~------~~n~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~-~--~~~~y~~~K~~~E 125 (287)
T 2jl1_A 66 -GVSKLLFISGPHY-------D-N------TLLIVQHANVVKAARDA--GVKHIAYTGYAFAE-E--SIIPLAHVHLATE 125 (287)
T ss_dssp -TCSEEEECCCCCS-------C-H------HHHHHHHHHHHHHHHHT--TCSEEEEEEETTGG-G--CCSTHHHHHHHHH
T ss_pred -cCCEEEEcCCCCc-------C-c------hHHHHHHHHHHHHHHHc--CCCEEEEECCCCCC-C--CCCchHHHHHHHH
Confidence 4899999998521 1 1 45788999998887653 45799999998764 2 3358999999999
Q ss_pred HHHHHHHHcCCCeEEEEccccCc
Q psy1119 940 RICEARRAEGLPGLAVEWGAVGE 962 (1392)
Q Consensus 940 ~la~~r~~~Glp~~ai~~g~~~~ 962 (1392)
.+++ ..|++...+..|.+.+
T Consensus 126 ~~~~---~~~~~~~ilrp~~~~~ 145 (287)
T 2jl1_A 126 YAIR---TTNIPYTFLRNALYTD 145 (287)
T ss_dssp HHHH---HTTCCEEEEEECCBHH
T ss_pred HHHH---HcCCCeEEEECCEecc
Confidence 9985 3799999888876543
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=1.9e-09 Score=126.78 Aligned_cols=159 Identities=16% Similarity=0.190 Sum_probs=114.1
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
...+++|||||+|+||.++++.|+++|++ |+.++|+....... +..+.. ..++.++.+|+++. .
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~---~~~~~~-~~~~~~~~~D~~~~-----------~ 88 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHE-VTVVDNFFTGRKRN---VEHWIG-HENFELINHDVVEP-----------L 88 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCGGG---TGGGTT-CTTEEEEECCTTSC-----------C
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCE-EEEEeCCCccchhh---hhhhcc-CCceEEEeCccCCh-----------h
Confidence 35689999999999999999999999987 77778764322111 111211 23577889999874 2
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc---------------
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR--------------- 923 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~--------------- 923 (1392)
+..+|.|||+|+....... .+++...+++|+.|+.++.+++... . ..||++||.+..-
T Consensus 89 ~~~~d~vih~A~~~~~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~--~-~~~v~~SS~~v~g~~~~~~~~E~~~~~~ 161 (343)
T 2b69_A 89 YIEVDQIYHLASPASPPNY----MYNPIKTLKTNTIGTLNMLGLAKRV--G-ARLLLASTSEVYGDPEVHPQSEDYWGHV 161 (343)
T ss_dssp CCCCSEEEECCSCCSHHHH----TTCHHHHHHHHHHHHHHHHHHHHHH--T-CEEEEEEEGGGGBSCSSSSBCTTCCCBC
T ss_pred hcCCCEEEECccccCchhh----hhCHHHHHHHHHHHHHHHHHHHHHh--C-CcEEEECcHHHhCCCCCCCCcccccccC
Confidence 4579999999997543221 1245678899999999999988664 2 3899999975431
Q ss_pred -CCCCChhHHHHHHHHHHHHHHHH-HcCCCeEEEEcccc
Q psy1119 924 -GNAGQTNYGMANSIMERICEARR-AEGLPGLAVEWGAV 960 (1392)
Q Consensus 924 -G~~gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~ 960 (1392)
+......|+++|.+.+.+++... ..|++...+..+.+
T Consensus 162 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v 200 (343)
T 2b69_A 162 NPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNT 200 (343)
T ss_dssp CSSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE
T ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcce
Confidence 11235679999999999988654 45999988888765
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=98.99 E-value=1.5e-08 Score=113.98 Aligned_cols=96 Identities=15% Similarity=0.111 Sum_probs=74.3
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCc-eEEEecC------CC--CCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQ-VLVFQFD------HT--NPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~-~~v~~l~------~e--~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
.++||+|+|+.+++...|.++++.|... ..|+.++ .. ....+++++++++.+.+... ...+++|+|||
T Consensus 18 ~g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l---~~~~~~lvGhS 94 (274)
T 1a8q_A 18 QGRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDLNDLLTDL---DLRDVTLVAHS 94 (274)
T ss_dssp SSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHT---TCCSEEEEEET
T ss_pred CCceEEEECCCcchHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCcHHHHHHHHHHHHHHc---CCCceEEEEeC
Confidence 4579999999999999999999998754 7888876 11 12358999999998888743 34589999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
|||.+|..+|.+- .-..+ .++++++.++
T Consensus 95 ~Gg~ia~~~a~~~--~p~~v~~lvl~~~~~~ 123 (274)
T 1a8q_A 95 MGGGELARYVGRH--GTGRLRSAVLLSAIPP 123 (274)
T ss_dssp THHHHHHHHHHHH--CSTTEEEEEEESCCCS
T ss_pred ccHHHHHHHHHHh--hhHheeeeeEecCCCc
Confidence 9999999877542 12345 8899988654
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.99 E-value=5.7e-09 Score=116.41 Aligned_cols=201 Identities=12% Similarity=0.124 Sum_probs=121.6
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCC----CCCHHHHHHHHHHHHhhhccCCCCcEEEEe
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNP----PDTIPEMADSLLPHFKKRLVHGTDEIKLVG 1224 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~----~~sieelA~~y~~~I~~~q~qp~gPy~L~G 1224 (1392)
|.++||+|+|+.+++...|..+++.|.....++.++ ...+ ..+++++++.+.+.++.. +..|+.|+|
T Consensus 21 g~~~~vv~~HG~~~~~~~~~~~~~~L~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~lvG 97 (278)
T 3oos_A 21 GEGPPLCVTHLYSEYNDNGNTFANPFTDHYSVYLVNLKGCGNSDSAKNDSEYSMTETIKDLEAIREAL---YINKWGFAG 97 (278)
T ss_dssp CSSSEEEECCSSEECCTTCCTTTGGGGGTSEEEEECCTTSTTSCCCSSGGGGSHHHHHHHHHHHHHHT---TCSCEEEEE
T ss_pred CCCCeEEEEcCCCcchHHHHHHHHHhhcCceEEEEcCCCCCCCCCCCCcccCcHHHHHHHHHHHHHHh---CCCeEEEEe
Confidence 456899999999999999999999998888888876 1111 237999999988877643 345899999
Q ss_pred echhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccc----c-CCCCChHHHHHHHHhcCCccccCCHHHHHHHHH---
Q psy1119 1225 FSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTS----L-RKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAH--- 1295 (1392)
Q Consensus 1225 ~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~----l-~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~--- 1295 (1392)
|||||.+|+++|.+..+ .+ .++++++.+...... . .........+..+...+..... .......+..
T Consensus 98 ~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 173 (278)
T 3oos_A 98 HSAGGMLALVYATEAQE---SLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDST-VQEERKALSREWA 173 (278)
T ss_dssp ETHHHHHHHHHHHHHGG---GEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHTCTTS-CHHHHHHHHHHHH
T ss_pred ecccHHHHHHHHHhCch---hhCeEEEecCccccccccccchhhhhhchhHHHHHHHHHhhccccc-CchHHHHHHHHHh
Confidence 99999999999987643 35 788888765411000 0 0001111122222221111110 0110000000
Q ss_pred ------------------------HHHHHHH--hhccccCC-CCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEE
Q psy1119 1296 ------------------------AAYKRIT--SILKYTDP-KHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKV 1347 (1392)
Q Consensus 1296 ------------------------~~~~~~~--~~~~y~~~-~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v 1347 (1392)
.....+. ....+... ...++++|++++.+++|. ........+.+.. ...++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~ 252 (278)
T 3oos_A 174 LMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLI-PNATL 252 (278)
T ss_dssp HHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHS-TTEEE
T ss_pred hcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEeccCCCCCHHHHHHHHhhC-CCcEE
Confidence 0000111 11122221 123678999999999987 4444444555554 35789
Q ss_pred EEEcc-CccccccChHH
Q psy1119 1348 HFVDG-NHFTVLDNIKS 1363 (1392)
Q Consensus 1348 ~~v~G-~H~~ml~~~~~ 1363 (1392)
+.++| +|+.+++++..
T Consensus 253 ~~~~~~gH~~~~~~p~~ 269 (278)
T 3oos_A 253 TKFEESNHNPFVEEIDK 269 (278)
T ss_dssp EEETTCSSCHHHHSHHH
T ss_pred EEcCCcCCCcccccHHH
Confidence 99996 99999988764
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=98.99 E-value=5.1e-09 Score=117.04 Aligned_cols=95 Identities=20% Similarity=0.208 Sum_probs=76.0
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCc-eEEEecC------CCC----CCCCHHHHHHHHHHHHhhhccCCCCcEEEEe
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQ-VLVFQFD------HTN----PPDTIPEMADSLLPHFKKRLVHGTDEIKLVG 1224 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~-~~v~~l~------~e~----~~~sieelA~~y~~~I~~~q~qp~gPy~L~G 1224 (1392)
.+++|+|+|+.+|+...|.++++.|... ..++.++ ... ...+++++++.+.+.++.. +.+|+.|+|
T Consensus 25 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G 101 (286)
T 3qit_A 25 EHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQIDRVIQEL---PDQPLLLVG 101 (286)
T ss_dssp TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSGGGCSHHHHHHHHHHHHHHS---CSSCEEEEE
T ss_pred CCCEEEEECCCCcccchHHHHHHHhhhcCeEEEEECCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHhc---CCCCEEEEE
Confidence 3578999999999999999999999876 8888876 111 2458999999988888743 457899999
Q ss_pred echhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1225 FSFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1225 ~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
|||||.+|+++|.+.. ..+ .++++++..+
T Consensus 102 ~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~ 131 (286)
T 3qit_A 102 HSMGAMLATAIASVRP---KKIKELILVELPLP 131 (286)
T ss_dssp ETHHHHHHHHHHHHCG---GGEEEEEEESCCCC
T ss_pred eCHHHHHHHHHHHhCh---hhccEEEEecCCCC
Confidence 9999999999998653 235 7888887554
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=98.98 E-value=2.7e-09 Score=136.84 Aligned_cols=160 Identities=11% Similarity=0.025 Sum_probs=119.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHh-CCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHH-HHHHHHHHh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLR-GARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAG-VVNLLTEAN 857 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~-GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~-v~~l~~~~~ 857 (1392)
.+++++||||+|+||.++++.|+++ |++ |++++|+..... .+. .+.++.++.+|+++.++ ++++++
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~-V~~~~r~~~~~~-------~~~-~~~~v~~v~~Dl~d~~~~~~~~~~--- 381 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYE-VYGLDIGSDAIS-------RFL-NHPHFHFVEGDISIHSEWIEYHVK--- 381 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEE-EEEEESCCTTTG-------GGT-TCTTEEEEECCTTTCHHHHHHHHH---
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCE-EEEEEcCchhhh-------hhc-cCCceEEEECCCCCcHHHHHHhhc---
Confidence 5678999999999999999999998 775 888888753321 111 12357788999999765 555554
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC-----------
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA----------- 926 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~----------- 926 (1392)
.+|.|||+|+...... ..+++...+++|+.|+.++.+++... . ..||++||.+..-+..
T Consensus 382 ---~~D~Vih~Aa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~aa~~~--~-~r~V~~SS~~vyg~~~~~~~~E~~~~~ 451 (660)
T 1z7e_A 382 ---KCDVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVKY--R-KRIIFPSTSEVYGMCSDKYFDEDHSNL 451 (660)
T ss_dssp ---HCSEEEECCCCCCTHH----HHHSHHHHHHHHTHHHHHHHHHHHHT--T-CEEEEECCGGGGBTCCSSSBCTTTCCE
T ss_pred ---CCCEEEECceecCccc----cccCHHHHHHhhhHHHHHHHHHHHHh--C-CEEEEEecHHHcCCCCCcccCCCcccc
Confidence 4899999999754321 23467789999999999999888664 3 7999999976542211
Q ss_pred -------CChhHHHHHHHHHHHHHHHH-HcCCCeEEEEccccC
Q psy1119 927 -------GQTNYGMANSIMERICEARR-AEGLPGLAVEWGAVG 961 (1392)
Q Consensus 927 -------gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~~ 961 (1392)
....|+++|.+.+.+++... ..|++...+..|.+-
T Consensus 452 ~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~ 494 (660)
T 1z7e_A 452 IVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWM 494 (660)
T ss_dssp EECCTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEE
T ss_pred ccCcccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCccc
Confidence 12379999999999998654 459999999988763
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=98.97 E-value=2.9e-09 Score=118.31 Aligned_cols=139 Identities=14% Similarity=0.091 Sum_probs=94.5
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
.+++|||||+||||+++++.|+++|..+|++++|+..... .+ ....+.++.+|++|+++++++++
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~-------~~--~~~~~~~~~~Dl~d~~~~~~~~~------ 87 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH-------KP--YPTNSQIIMGDVLNHAALKQAMQ------ 87 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC-------SS--CCTTEEEEECCTTCHHHHHHHHT------
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc-------cc--ccCCcEEEEecCCCHHHHHHHhc------
Confidence 4789999999999999999999999334888899853221 11 12357788999999999988775
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCC------------
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQ------------ 928 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq------------ 928 (1392)
.+|.|||||+... +. ..+.++.++++.. ..+.||++||+++..+.++.
T Consensus 88 ~~D~vv~~a~~~~-----------~~-------~~~~~~~~~~~~~--~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~ 147 (236)
T 3qvo_A 88 GQDIVYANLTGED-----------LD-------IQANSVIAAMKAC--DVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEP 147 (236)
T ss_dssp TCSEEEEECCSTT-----------HH-------HHHHHHHHHHHHT--TCCEEEEECCCCC----------------CGG
T ss_pred CCCEEEEcCCCCc-----------hh-------HHHHHHHHHHHHc--CCCEEEEEecceecCCCCcccccchhhcccch
Confidence 5799999998511 11 1234555554432 45799999999887666553
Q ss_pred -hhHHHHHHHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 929 -TNYGMANSIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 929 -~~Yaaana~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
..|.+++.. .+..|++...|..|.+-
T Consensus 148 ~~~~~~~~~~-------l~~~gi~~~~vrPg~i~ 174 (236)
T 3qvo_A 148 LKPFRRAADA-------IEASGLEYTILRPAWLT 174 (236)
T ss_dssp GHHHHHHHHH-------HHTSCSEEEEEEECEEE
T ss_pred HHHHHHHHHH-------HHHCCCCEEEEeCCccc
Confidence 345554433 24679999999888764
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=98.96 E-value=1.9e-08 Score=113.82 Aligned_cols=202 Identities=13% Similarity=0.119 Sum_probs=120.5
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCc-eEEEecC------CCC--CCCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQ-VLVFQFD------HTN--PPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~-~~v~~l~------~e~--~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
.++||+|+|+.+++...|.++++.|... ..|+.++ ... ...+++++|+++.+.+... ...|++|+|||
T Consensus 22 ~g~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~lvGhS 98 (277)
T 1brt_A 22 TGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETL---DLQDAVLVGFS 98 (277)
T ss_dssp SSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH---TCCSEEEEEEG
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHhhCCCEEEEeCCCCCCCCCCCCCCccHHHHHHHHHHHHHHh---CCCceEEEEEC
Confidence 4578999999999999999999999764 8888876 111 2358999999998888743 34689999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCC---C---hHHH-----------HHHHHh-cCCc----cc
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLP---D---WNAK-----------LNYFLD-LMPE----DA 1283 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~---~---~~~~-----------l~~~~~-~~~~----~~ 1283 (1392)
|||.+|.++|.+.-+ ..+ .|+++++.++.......... . +... +..+.. .... ..
T Consensus 99 ~Gg~va~~~a~~~p~--~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (277)
T 1brt_A 99 TGTGEVARYVSSYGT--ARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGT 176 (277)
T ss_dssp GGHHHHHHHHHHHCS--TTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHBTT
T ss_pred ccHHHHHHHHHHcCc--ceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCchhhHHHHHHHHhhccccccc
Confidence 999999999976421 145 88999875543211110000 0 0000 111111 0110 00
Q ss_pred cCCHHHHHHHHHHHH-----HHHHhhcc--ccC-CCCCcccceEEEEeeCCCC-CCChhh-cCcccccCCCeEEEEEcc-
Q psy1119 1284 THSRTYQRNLAHAAY-----KRITSILK--YTD-PKHKAFGGNITLLRPTEQA-LPTAED-YGLSKVCKKPVKVHFVDG- 1352 (1392)
Q Consensus 1284 ~~~~~~l~~~~~~~~-----~~~~~~~~--y~~-~~~~~~~~pi~l~~a~~~~-~~~~~~-~~W~~~~~g~v~v~~v~G- 1352 (1392)
..+++....+..... ........ +.. ....++++|++++.+++|. ...... ..+.+... ..+++.++|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~ 255 (277)
T 1brt_A 177 RISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALP-SAEYVEVEGA 255 (277)
T ss_dssp TBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCT-TSEEEEETTC
T ss_pred cCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcccCCCCeEEEecCCCccCChHHHHHHHHHHCC-CCcEEEeCCC
Confidence 122333322221110 11111111 111 1234688999999999987 433333 33444443 468899995
Q ss_pred CccccccChHH
Q psy1119 1353 NHFTVLDNIKS 1363 (1392)
Q Consensus 1353 ~H~~ml~~~~~ 1363 (1392)
+|+.++++|..
T Consensus 256 gH~~~~e~p~~ 266 (277)
T 1brt_A 256 PHGLLWTHAEE 266 (277)
T ss_dssp CTTHHHHTHHH
T ss_pred CcchhhhCHHH
Confidence 99999988753
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=98.95 E-value=7.5e-09 Score=117.48 Aligned_cols=200 Identities=16% Similarity=0.170 Sum_probs=119.2
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCC----CCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNP----PDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~----~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
++||+|+|+.+++...|.+++..|.....|+.++ ...+ .-+++++|+++.+.+... ...|++|+|||
T Consensus 29 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~lvGhS 105 (285)
T 3bwx_A 29 RPPVLCLPGLTRNARDFEDLATRLAGDWRVLCPEMRGRGDSDYAKDPMTYQPMQYLQDLEALLAQE---GIERFVAIGTS 105 (285)
T ss_dssp SCCEEEECCTTCCGGGGHHHHHHHBBTBCEEEECCTTBTTSCCCSSGGGCSHHHHHHHHHHHHHHH---TCCSEEEEEET
T ss_pred CCcEEEECCCCcchhhHHHHHHHhhcCCEEEeecCCCCCCCCCCCCccccCHHHHHHHHHHHHHhc---CCCceEEEEeC
Confidence 5799999999999999999999998788888876 1111 248999999998888744 34689999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccc-------c---CCCCChHHHHHHHHhcCCccc-cCCHHHHHHHH
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTS-------L---RKLPDWNAKLNYFLDLMPEDA-THSRTYQRNLA 1294 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~-------l---~~~~~~~~~l~~~~~~~~~~~-~~~~~~l~~~~ 1294 (1392)
|||.||+++|.+.. +.+ .|+++|..|...... + .....+.+....+........ ....+......
T Consensus 106 ~Gg~va~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (285)
T 3bwx_A 106 LGGLLTMLLAAANP---ARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYA 182 (285)
T ss_dssp HHHHHHHHHHHHCG---GGEEEEEEESCCSSCCHHHHHHHHHHTTCCCEESSHHHHHHHHHHHHTTTSTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCc---hheeEEEEecCCcccCcchhHHHHHHhcCCcccccHHHHHHHHHHhhhhcccccChHHHHHHH
Confidence 99999999997643 345 788888755321100 0 011223322222111110000 01111111111
Q ss_pred HHHHHHH-----------HhhccccC------CC-----CCcc-cceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEE
Q psy1119 1295 HAAYKRI-----------TSILKYTD------PK-----HKAF-GGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFV 1350 (1392)
Q Consensus 1295 ~~~~~~~-----------~~~~~y~~------~~-----~~~~-~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v 1350 (1392)
...+... .....+.. .. ...+ ++|++++.+++|. ........|.+. ...+++.+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~--~~~~~~~i 260 (285)
T 3bwx_A 183 KRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVLRGETSDILSAQTAAKMASR--PGVELVTL 260 (285)
T ss_dssp HHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSCEEEEEETTCSSSCHHHHHHHHTS--TTEEEEEE
T ss_pred HhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCCeEEEEeCCCCccCHHHHHHHHhC--CCcEEEEe
Confidence 1100000 00000100 00 0123 7999999999887 443444455555 46889999
Q ss_pred cc-CccccccChHHH
Q psy1119 1351 DG-NHFTVLDNIKSA 1364 (1392)
Q Consensus 1351 ~G-~H~~ml~~~~~~ 1364 (1392)
+| +|+.++++|...
T Consensus 261 ~~~gH~~~~e~p~~~ 275 (285)
T 3bwx_A 261 PRIGHAPTLDEPESI 275 (285)
T ss_dssp TTCCSCCCSCSHHHH
T ss_pred CCCCccchhhCchHH
Confidence 96 999999988643
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=98.95 E-value=6.1e-09 Score=117.99 Aligned_cols=213 Identities=10% Similarity=0.080 Sum_probs=123.7
Q ss_pred CCCCceeEeecCCCccccccH-HHHhhc-CCceEEEecC-------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEe
Q psy1119 1154 VGNNNTIFMVPGIEGIATVLE-PLAKNI-NAQVLVFQFD-------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVG 1224 (1392)
Q Consensus 1154 ~g~~~pLF~vp~agG~~~~y~-~La~~L-~~~~~v~~l~-------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G 1224 (1392)
.|.++||+|+|+.+|+...|. .++..| .....++.++ ..+...+++++++.+.+.++.. +..|+.|+|
T Consensus 40 ~g~~~~vv~lHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~l~~l---~~~~~~lvG 116 (293)
T 3hss_A 40 NGTGDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENAEGFTTQTMVADTAALIETL---DIAPARVVG 116 (293)
T ss_dssp ECSSEEEEEECCTTCCGGGGTTTTHHHHHHTTEEEEEECCTTSGGGTTCCSCCHHHHHHHHHHHHHHH---TCCSEEEEE
T ss_pred cCCCCEEEEECCCCCchhhcchhhhhhHhhcCCeEEEEccCCCCCCCCcccCCHHHHHHHHHHHHHhc---CCCcEEEEe
Confidence 356689999999999999998 566666 5678888876 2233458999999998888744 456899999
Q ss_pred echhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccc-------------cCCCCChHHHHHHHHhcCCccccCCHHHH
Q psy1119 1225 FSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTS-------------LRKLPDWNAKLNYFLDLMPEDATHSRTYQ 1290 (1392)
Q Consensus 1225 ~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~-------------l~~~~~~~~~l~~~~~~~~~~~~~~~~~l 1290 (1392)
|||||.+|+++|.+.. ..+ .++++++.+...... .............................
T Consensus 117 hS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (293)
T 3hss_A 117 VSMGAFIAQELMVVAP---ELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRKTLNDDVAV 193 (293)
T ss_dssp ETHHHHHHHHHHHHCG---GGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHHHHTCHHHH
T ss_pred eCccHHHHHHHHHHCh---HHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHhhhcccccccccccH
Confidence 9999999999998643 235 778887754321000 00000000111111111111111122111
Q ss_pred HHHHHH-----------HHHHHHhhccccCC-CCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-Cccc
Q psy1119 1291 RNLAHA-----------AYKRITSILKYTDP-KHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHFT 1356 (1392)
Q Consensus 1291 ~~~~~~-----------~~~~~~~~~~y~~~-~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~~ 1356 (1392)
...... +...+.....+... ...++++|++++.+++|. ........|.+.. ...+++.++| +|+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~ 272 (293)
T 3hss_A 194 GDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADAL-PNGRYLQIPDAGHLG 272 (293)
T ss_dssp HHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHS-TTEEEEEETTCCTTH
T ss_pred HHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHC-CCceEEEeCCCcchH
Confidence 111111 11111111111111 123678999999999987 4444444455544 3478999986 9999
Q ss_pred cccChHHHHHHHhhhcccC
Q psy1119 1357 VLDNIKSAQIIMHEDSTDF 1375 (1392)
Q Consensus 1357 ml~~~~~~~i~~~l~~~L~ 1375 (1392)
+++++. .+...+.+.|+
T Consensus 273 ~~~~p~--~~~~~i~~fl~ 289 (293)
T 3hss_A 273 FFERPE--AVNTAMLKFFA 289 (293)
T ss_dssp HHHSHH--HHHHHHHHHHH
T ss_pred hhhCHH--HHHHHHHHHHH
Confidence 998875 33344444443
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=98.95 E-value=3.2e-08 Score=113.26 Aligned_cols=94 Identities=17% Similarity=0.258 Sum_probs=76.4
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCC------CCCHHHHHHHHHHHHhhhccCCCCcEEE
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNP------PDTIPEMADSLLPHFKKRLVHGTDEIKL 1222 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~------~~sieelA~~y~~~I~~~q~qp~gPy~L 1222 (1392)
|.++||+|+|+.+++...|.+++..|.....|+.++ ...+ .-|++++|+++.+.|... +-.+++|
T Consensus 27 G~g~~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~ll~~l---~~~~~~l 103 (294)
T 1ehy_A 27 GAGPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAADDQAALLDAL---GIEKAYV 103 (294)
T ss_dssp ECSSEEEEECCSSCCGGGGHHHHHHHHTTSEEEEECCTTSTTSCCCCTTCGGGGCHHHHHHHHHHHHHHT---TCCCEEE
T ss_pred CCCCEEEEECCCCcchhhHHHHHHHHhhcCEEEecCCCCCCCCCCCccccccCcCHHHHHHHHHHHHHHc---CCCCEEE
Confidence 356899999999999999999999998778888886 2222 248999999998888743 3468999
Q ss_pred EeechhHHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1223 VGFSFGGMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1223 ~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
+||||||.||.++|.+-- +.+ .|+++|+.
T Consensus 104 vGhS~Gg~va~~~A~~~P---~~v~~lvl~~~~ 133 (294)
T 1ehy_A 104 VGHDFAAIVLHKFIRKYS---DRVIKAAIFDPI 133 (294)
T ss_dssp EEETHHHHHHHHHHHHTG---GGEEEEEEECCS
T ss_pred EEeChhHHHHHHHHHhCh---hheeEEEEecCC
Confidence 999999999999998642 346 89999974
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=98.94 E-value=1.3e-08 Score=112.89 Aligned_cols=189 Identities=14% Similarity=0.143 Sum_probs=115.8
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC-------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD-------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~-------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
|.++||+|+|+.+|+...|.++++.|.....++.++ ..++..+++++++++.+.++.. + .|++|+||||
T Consensus 21 g~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~~~~~~~l---~-~~~~l~G~S~ 96 (262)
T 3r0v_A 21 GSGPPVVLVGGALSTRAGGAPLAERLAPHFTVICYDRRGRGDSGDTPPYAVEREIEDLAAIIDAA---G-GAAFVFGMSS 96 (262)
T ss_dssp ECSSEEEEECCTTCCGGGGHHHHHHHTTTSEEEEECCTTSTTCCCCSSCCHHHHHHHHHHHHHHT---T-SCEEEEEETH
T ss_pred CCCCcEEEECCCCcChHHHHHHHHHHhcCcEEEEEecCCCcCCCCCCCCCHHHHHHHHHHHHHhc---C-CCeEEEEEcH
Confidence 346899999999999999999999998778888876 1223568999999998888733 4 7999999999
Q ss_pred hHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCCh-------------HHHHHHHHhcCCccccCCHHHHHHH
Q psy1119 1228 GGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDW-------------NAKLNYFLDLMPEDATHSRTYQRNL 1293 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~-------------~~~l~~~~~~~~~~~~~~~~~l~~~ 1293 (1392)
||.+|+.+|.+ .. .+ .++++++..............+ ...+..+.... ...+++..+.+
T Consensus 97 Gg~ia~~~a~~---~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 169 (262)
T 3r0v_A 97 GAGLSLLAAAS---GL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGRRGDAVTYFMTEG---VGVPPDLVAQM 169 (262)
T ss_dssp HHHHHHHHHHT---TC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTTCHHHHHHHHHHHT---SCCCHHHHHHH
T ss_pred HHHHHHHHHHh---CC-CcceEEEEcCCcccccccchhhhHHHHHHHHHhhccchhhHHHHHhhcc---cCCCHHHHHHH
Confidence 99999999986 22 45 7888887543321111111111 22222222221 01122222222
Q ss_pred H------------HHHHHHHHhhccccC--CCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-Ccc
Q psy1119 1294 A------------HAAYKRITSILKYTD--PKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHF 1355 (1392)
Q Consensus 1294 ~------------~~~~~~~~~~~~y~~--~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~ 1355 (1392)
. ..+..+......+.. .....+++|++++.++.|. ........+.+... ..+++.++| +|+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~ 246 (262)
T 3r0v_A 170 QQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAWIRHTAQELADTIP-NARYVTLENQTHT 246 (262)
T ss_dssp HTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHHHHHHHHHHHHHST-TEEEEECCCSSSS
T ss_pred HhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCCCHHHHHHHHHhCC-CCeEEEecCCCcc
Confidence 1 111111111111111 1124678999999999887 43334444555443 468999996 993
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=6.6e-09 Score=117.26 Aligned_cols=200 Identities=14% Similarity=0.170 Sum_probs=118.5
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCC------CCCHHHHHHHHHHHHhhhccCCCCcEEEEe
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNP------PDTIPEMADSLLPHFKKRLVHGTDEIKLVG 1224 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~------~~sieelA~~y~~~I~~~q~qp~gPy~L~G 1224 (1392)
++||+|+|+.+++...|.+++..|.....|+.++ ...+ ..+++++|+++.+.++.. ...|++|+|
T Consensus 20 ~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~lvG 96 (271)
T 1wom_A 20 KASIMFAPGFGCDQSVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEAL---DLKETVFVG 96 (271)
T ss_dssp SSEEEEECCTTCCGGGGTTTGGGGTTTSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHHHHHT---TCSCEEEEE
T ss_pred CCcEEEEcCCCCchhhHHHHHHHHHhcCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHHHHHc---CCCCeEEEE
Confidence 3689999999999999999999998888888886 1111 248999999998888743 346899999
Q ss_pred echhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccc--cC-CCC--ChHHHHHHHHh-------cCCc---cccCCHH
Q psy1119 1225 FSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTS--LR-KLP--DWNAKLNYFLD-------LMPE---DATHSRT 1288 (1392)
Q Consensus 1225 ~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~--l~-~~~--~~~~~l~~~~~-------~~~~---~~~~~~~ 1288 (1392)
|||||.||.++|.+-. +.+ .|+++++.|...... .. ... ..+..+..+.. .... .....++
T Consensus 97 hS~GG~va~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (271)
T 1wom_A 97 HSVGALIGMLASIRRP---ELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPE 173 (271)
T ss_dssp ETHHHHHHHHHHHHCG---GGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCTTCHH
T ss_pred eCHHHHHHHHHHHhCH---HhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCchH
Confidence 9999999999987532 235 889998865432111 00 000 01111111100 0000 0001222
Q ss_pred HHHHHHHHHHH--------HHHhhccccCC-CCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEc-cCcccc
Q psy1119 1289 YQRNLAHAAYK--------RITSILKYTDP-KHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVD-GNHFTV 1357 (1392)
Q Consensus 1289 ~l~~~~~~~~~--------~~~~~~~y~~~-~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~-G~H~~m 1357 (1392)
..+.+...+.. ........... ....+++|++++.+++|. ........+.+... ..+++.++ ++|+.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~ 252 (271)
T 1wom_A 174 IKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLP-YSSLKQMEARGHCPH 252 (271)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHSS-SEEEEEEEEESSCHH
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHCC-CCEEEEeCCCCcCcc
Confidence 22222211110 01111111111 124688999999999887 33333333344433 37888998 599999
Q ss_pred ccChHH
Q psy1119 1358 LDNIKS 1363 (1392)
Q Consensus 1358 l~~~~~ 1363 (1392)
+++|..
T Consensus 253 ~e~p~~ 258 (271)
T 1wom_A 253 MSHPDE 258 (271)
T ss_dssp HHCHHH
T ss_pred ccCHHH
Confidence 998753
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.94 E-value=5.5e-09 Score=116.39 Aligned_cols=94 Identities=18% Similarity=0.259 Sum_probs=76.7
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecC------C--CCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechh
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------H--TNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFG 1228 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~--e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~G 1228 (1392)
+++|+|+|+.+++...|.++++.|.....++.++ . .....+++++++++.+.++.. ...|++|+|||||
T Consensus 21 ~~~vv~lHG~~~~~~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~lvGhS~G 97 (264)
T 3ibt_A 21 APTLFLLSGWCQDHRLFKNLAPLLARDFHVICPDWRGHDAKQTDSGDFDSQTLAQDLLAFIDAK---GIRDFQMVSTSHG 97 (264)
T ss_dssp SCEEEEECCTTCCGGGGTTHHHHHTTTSEEEEECCTTCSTTCCCCSCCCHHHHHHHHHHHHHHT---TCCSEEEEEETTH
T ss_pred CCeEEEEcCCCCcHhHHHHHHHHHHhcCcEEEEccccCCCCCCCccccCHHHHHHHHHHHHHhc---CCCceEEEecchh
Confidence 5799999999999999999999998878888876 1 123458999999999888743 3468999999999
Q ss_pred HHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1229 GMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1229 g~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
|.+|+++|.+.. ...+ .++++++.+
T Consensus 98 g~ia~~~a~~~~--p~~v~~lvl~~~~~ 123 (264)
T 3ibt_A 98 CWVNIDVCEQLG--AARLPKTIIIDWLL 123 (264)
T ss_dssp HHHHHHHHHHSC--TTTSCEEEEESCCS
T ss_pred HHHHHHHHHhhC--hhhhheEEEecCCC
Confidence 999999997640 2345 899999865
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=98.92 E-value=6.3e-09 Score=119.77 Aligned_cols=149 Identities=15% Similarity=0.096 Sum_probs=107.7
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhC-CceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRG-ARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~G-Ar~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.++++||||+|+||.++++.|+++| ++ |+.++|+..... . +.+...| +.++.+|++|++++.++++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~-V~~~~R~~~~~~-~----~~l~~~~--~~~~~~D~~d~~~l~~~~~----- 71 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFK-VRVVTRNPRKKA-A----KELRLQG--AEVVQGDQDDQVIMELALN----- 71 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSE-EEEEESCTTSHH-H----HHHHHTT--CEEEECCTTCHHHHHHHHT-----
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCce-EEEEEcCCCCHH-H----HHHHHCC--CEEEEecCCCHHHHHHHHh-----
Confidence 4789999999999999999999999 65 888889854321 1 2233345 4567899999999887764
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC---CChhHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA---GQTNYGMANS 936 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~---gq~~Yaaana 936 (1392)
.+|.|||+|+..... ....++.++.++.+++... ..++||+.|| .+..+.. ....|+.+|.
T Consensus 72 -~~d~vi~~a~~~~~~------------~~~~~~~~~~~~~~aa~~~--gv~~iv~~S~-~~~~~~~~~~~~~~y~~sK~ 135 (299)
T 2wm3_A 72 -GAYATFIVTNYWESC------------SQEQEVKQGKLLADLARRL--GLHYVVYSGL-ENIKKLTAGRLAAAHFDGKG 135 (299)
T ss_dssp -TCSEEEECCCHHHHT------------CHHHHHHHHHHHHHHHHHH--TCSEEEECCC-CCHHHHTTTSCCCHHHHHHH
T ss_pred -cCCEEEEeCCCCccc------------cchHHHHHHHHHHHHHHHc--CCCEEEEEcC-ccccccCCCcccCchhhHHH
Confidence 489999999853110 1234566888887776553 4578998555 4433322 2578999999
Q ss_pred HHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 937 IMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
.++.+.+. .|++...+..|.+-
T Consensus 136 ~~e~~~~~---~gi~~~ilrp~~~~ 157 (299)
T 2wm3_A 136 EVEEYFRD---IGVPMTSVRLPCYF 157 (299)
T ss_dssp HHHHHHHH---HTCCEEEEECCEEG
T ss_pred HHHHHHHH---CCCCEEEEeecHHh
Confidence 99998864 58999888887653
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=98.92 E-value=1.2e-08 Score=116.80 Aligned_cols=202 Identities=12% Similarity=0.128 Sum_probs=119.8
Q ss_pred CCCceeEeecCCC---ccccccHHHHhhcCCceEEEecC------CCCC--CCCHHHHHHHHHHHHhhhccCCCCcEEEE
Q psy1119 1155 GNNNTIFMVPGIE---GIATVLEPLAKNINAQVLVFQFD------HTNP--PDTIPEMADSLLPHFKKRLVHGTDEIKLV 1223 (1392)
Q Consensus 1155 g~~~pLF~vp~ag---G~~~~y~~La~~L~~~~~v~~l~------~e~~--~~sieelA~~y~~~I~~~q~qp~gPy~L~ 1223 (1392)
|.++||+|+|+.+ ++...|.+++..|.....|+.++ ..+. ..+++++++++.+.++.. ...+|+.|+
T Consensus 34 g~g~~vvllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~dl~~~l~~l--~~~~~~~lv 111 (296)
T 1j1i_A 34 GKGQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRIRHLHDFIKAM--NFDGKVSIV 111 (296)
T ss_dssp CCSSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHHS--CCSSCEEEE
T ss_pred CCCCeEEEECCCCCCcchHHHHHHHHHHHhhcCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc--CCCCCeEEE
Confidence 3457999999998 66677888888887778888876 1211 358999999998888743 222689999
Q ss_pred eechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCc-----cccCC-CCChHHHHHHHHhcC-CccccCCHHHHHHHHH
Q psy1119 1224 GFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVL-----TSLRK-LPDWNAKLNYFLDLM-PEDATHSRTYQRNLAH 1295 (1392)
Q Consensus 1224 G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~-----~~l~~-~~~~~~~l~~~~~~~-~~~~~~~~~~l~~~~~ 1295 (1392)
||||||.||+++|.+.. ..+ .|+++++.+.... ..+.. .+..+ .+..++... ......+.+.......
T Consensus 112 GhS~Gg~ia~~~A~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (296)
T 1j1i_A 112 GNSMGGATGLGVSVLHS---ELVNALVLMGSAGLVVEIHEDLRPIINYDFTRE-GMVHLVKALTNDGFKIDDAMINSRYT 187 (296)
T ss_dssp EEHHHHHHHHHHHHHCG---GGEEEEEEESCCBCCCC----------CCSCHH-HHHHHHHHHSCTTCCCCHHHHHHHHH
T ss_pred EEChhHHHHHHHHHhCh---HhhhEEEEECCCCCCCCCCchHHHHhcccCCch-HHHHHHHHhccCcccccHHHHHHHHH
Confidence 99999999999997542 345 7888887542110 00000 11211 222222211 1111112222221111
Q ss_pred ---------HHHHHHHhh---c-cccC-CCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEc-cCcccccc
Q psy1119 1296 ---------AAYKRITSI---L-KYTD-PKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVD-GNHFTVLD 1359 (1392)
Q Consensus 1296 ---------~~~~~~~~~---~-~y~~-~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~-G~H~~ml~ 1359 (1392)
.+...+... . .+.. .....+++|++++.+++|. ........|.+... ..+++.++ ++|+.+++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e 266 (296)
T 1j1i_A 188 YATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLID-DSWGYIIPHCGHWAMIE 266 (296)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCT-TEEEEEESSCCSCHHHH
T ss_pred HhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCHHHHHHHHHHCC-CCEEEEECCCCCCchhc
Confidence 111111111 1 1111 1124688999999999987 44444455666553 46788898 59999998
Q ss_pred ChHH
Q psy1119 1360 NIKS 1363 (1392)
Q Consensus 1360 ~~~~ 1363 (1392)
+|..
T Consensus 267 ~p~~ 270 (296)
T 1j1i_A 267 HPED 270 (296)
T ss_dssp SHHH
T ss_pred CHHH
Confidence 8753
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.92 E-value=4.3e-09 Score=120.09 Aligned_cols=93 Identities=22% Similarity=0.286 Sum_probs=76.1
Q ss_pred CCceeEeecCCCcccc-ccHHHHhhcCCceEEEecC------CCC-C----CCCHHHHHHHHHHHHhhhccCCCCcEEEE
Q psy1119 1156 NNNTIFMVPGIEGIAT-VLEPLAKNINAQVLVFQFD------HTN-P----PDTIPEMADSLLPHFKKRLVHGTDEIKLV 1223 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~-~y~~La~~L~~~~~v~~l~------~e~-~----~~sieelA~~y~~~I~~~q~qp~gPy~L~ 1223 (1392)
.++||+|+|+.+|+.. .|.+++..|.....|+.++ ... + ..+++++|+++.+.+... +..+++|+
T Consensus 24 ~~~~vvllHG~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~a~dl~~ll~~l---~~~~~~lv 100 (286)
T 2yys_A 24 EGPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGSGRSLELPQDPRLFTVDALVEDTLLLAEAL---GVERFGLL 100 (286)
T ss_dssp TSCEEEEECCTTTCCSHHHHHHHGGGCTTSEEEEECCTTSTTSCCCCSCGGGCCHHHHHHHHHHHHHHT---TCCSEEEE
T ss_pred CCCEEEEECCCCCcchhHHHHHHHHhcCCCEEEEECCCCCCCCCCCccCcccCcHHHHHHHHHHHHHHh---CCCcEEEE
Confidence 4579999999999999 8999999998788888886 222 2 358999999998888743 34689999
Q ss_pred eechhHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1224 GFSFGGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1224 G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
||||||.||.++|.+ ..+ + .|+++++.+
T Consensus 101 GhS~Gg~ia~~~a~~---~p~-v~~lvl~~~~~ 129 (286)
T 2yys_A 101 AHGFGAVVALEVLRR---FPQ-AEGAILLAPWV 129 (286)
T ss_dssp EETTHHHHHHHHHHH---CTT-EEEEEEESCCC
T ss_pred EeCHHHHHHHHHHHh---Ccc-hheEEEeCCcc
Confidence 999999999999976 334 6 899998865
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=98.92 E-value=2.3e-08 Score=112.43 Aligned_cols=97 Identities=20% Similarity=0.174 Sum_probs=74.8
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCc-eEEEecC------CC--CCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQ-VLVFQFD------HT--NPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~-~~v~~l~------~e--~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
.++||+|+|+.+++...|.++++.|... ..|+.++ .. ....+++++++++.+.+... ...+++|+|||
T Consensus 18 ~~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l---~~~~~~lvGhS 94 (273)
T 1a8s_A 18 SGQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLAQLIEHL---DLRDAVLFGFS 94 (273)
T ss_dssp CSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHT---TCCSEEEEEET
T ss_pred CCCEEEEECCCCCcHHHHhhHHhhHhhCCcEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCeEEEEeC
Confidence 4579999999999999999999999764 8888876 11 12358999999998888743 34689999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCC
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSAPDY 1257 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~ 1257 (1392)
|||.+|..+|.+. ....+ .++++++.++.
T Consensus 95 ~Gg~ia~~~a~~~--~p~~v~~lvl~~~~~~~ 124 (273)
T 1a8s_A 95 TGGGEVARYIGRH--GTARVAKAGLISAVPPL 124 (273)
T ss_dssp HHHHHHHHHHHHH--CSTTEEEEEEESCCCSC
T ss_pred hHHHHHHHHHHhc--CchheeEEEEEcccCcc
Confidence 9999998876543 12345 88999886543
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=3.5e-09 Score=120.87 Aligned_cols=139 Identities=14% Similarity=0.146 Sum_probs=102.7
Q ss_pred eEEEEcCcchHHHHHHHHHHHh--CCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 783 SYIICGGLGGFGLELADWLVLR--GARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~--GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
+++||||+|+||.++++.|+++ |++ |+.++|+...... +...+ +.++.+|++|++++.++++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~~-------~~~~~--~~~~~~D~~d~~~~~~~~~------ 64 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQ-IVAIVRNPAKAQA-------LAAQG--ITVRQADYGDEAALTSALQ------ 64 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGG-EEEEESCTTTCHH-------HHHTT--CEEEECCTTCHHHHHHHTT------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCce-EEEEEcChHhhhh-------hhcCC--CeEEEcCCCCHHHHHHHHh------
Confidence 3799999999999999999998 886 7778887543321 12234 4567899999998887654
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHH
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMER 940 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~ 940 (1392)
.+|.|||+|+... ..++.++.++.+++... ..++||++||.++. .....|+.+|...+.
T Consensus 65 ~~d~vi~~a~~~~----------------~~~~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~ 123 (286)
T 2zcu_A 65 GVEKLLLISSSEV----------------GQRAPQHRNVINAAKAA--GVKFIAYTSLLHAD---TSPLGLADEHIETEK 123 (286)
T ss_dssp TCSEEEECC------------------------CHHHHHHHHHHHH--TCCEEEEEEETTTT---TCCSTTHHHHHHHHH
T ss_pred CCCEEEEeCCCCc----------------hHHHHHHHHHHHHHHHc--CCCEEEEECCCCCC---CCcchhHHHHHHHHH
Confidence 5799999998521 13567888888877654 45799999998765 234589999999999
Q ss_pred HHHHHHHcCCCeEEEEccccC
Q psy1119 941 ICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 941 la~~r~~~Glp~~ai~~g~~~ 961 (1392)
+++. .|++...+..|.++
T Consensus 124 ~~~~---~~~~~~ilrp~~~~ 141 (286)
T 2zcu_A 124 MLAD---SGIVYTLLRNGWYS 141 (286)
T ss_dssp HHHH---HCSEEEEEEECCBH
T ss_pred HHHH---cCCCeEEEeChHHh
Confidence 9864 68998888877654
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=1.2e-08 Score=120.53 Aligned_cols=148 Identities=14% Similarity=0.042 Sum_probs=110.4
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEecc-CCCHHHHHHHHHHHhhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDD-ITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~D-v~~~~~v~~l~~~~~~~ 859 (1392)
.++++||||+|+||.++++.|+++|.+ |+.+.|+..... .+.+... ..+.++.+| ++|++++.++++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~-----~~~l~~~-~~v~~v~~D~l~d~~~l~~~~~----- 72 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHH-VRAQVHSLKGLI-----AEELQAI-PNVTLFQGPLLNNVPLMDTLFE----- 72 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCSCSHH-----HHHHHTS-TTEEEEESCCTTCHHHHHHHHT-----
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCE-EEEEECCCChhh-----HHHHhhc-CCcEEEECCccCCHHHHHHHHh-----
Confidence 468999999999999999999999986 777788754321 1223322 236678999 999999887764
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC-CCeEEEecccc-cccCCCCChhHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT-LGQFVVFSSVS-CGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~-l~~fV~~SS~s-~~~G~~gq~~Yaaana~ 937 (1392)
.+|.|||+++.... ..++.+ .++.+++... . .++||++||.+ +..+......|+.+|..
T Consensus 73 -~~d~Vi~~a~~~~~---------------~~~~~~-~~l~~aa~~~--g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~ 133 (352)
T 1xgk_A 73 -GAHLAFINTTSQAG---------------DEIAIG-KDLADAAKRA--GTIQHYIYSSMPDHSLYGPWPAVPMWAPKFT 133 (352)
T ss_dssp -TCSEEEECCCSTTS---------------CHHHHH-HHHHHHHHHH--SCCSEEEEEECCCGGGTSSCCCCTTTHHHHH
T ss_pred -cCCEEEEcCCCCCc---------------HHHHHH-HHHHHHHHHc--CCccEEEEeCCccccccCCCCCccHHHHHHH
Confidence 47999999975320 124455 7776766543 3 57999999987 45666677899999999
Q ss_pred HHHHHHHHHHcCCCeEEEEccccCc
Q psy1119 938 MERICEARRAEGLPGLAVEWGAVGE 962 (1392)
Q Consensus 938 ld~la~~r~~~Glp~~ai~~g~~~~ 962 (1392)
.+.+++. .|++.+.+..|.+++
T Consensus 134 ~E~~~~~---~gi~~~ivrpg~~g~ 155 (352)
T 1xgk_A 134 VENYVRQ---LGLPSTFVYAGIYNN 155 (352)
T ss_dssp HHHHHHT---SSSCEEEEEECEEGG
T ss_pred HHHHHHH---cCCCEEEEecceecC
Confidence 9999875 489998888776553
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=98.90 E-value=1.7e-09 Score=123.83 Aligned_cols=144 Identities=15% Similarity=0.081 Sum_probs=107.1
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
.+++|||| +|.||.++++.|+++|.+ |+.++|+.... ...+.++.+|++|.+++.++++ +
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~-V~~~~r~~~~~-------------~~~~~~~~~Dl~d~~~~~~~~~-----~ 62 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLTAQGHE-VTGLRRSAQPM-------------PAGVQTLIADVTRPDTLASIVH-----L 62 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTTCC-EEEEECTTSCC-------------CTTCCEEECCTTCGGGCTTGGG-----G
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCE-EEEEeCCcccc-------------ccCCceEEccCCChHHHHHhhc-----C
Confidence 46799999 599999999999999996 88888875331 1245678999999988776554 3
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC-----------CCh
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA-----------GQT 929 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~-----------gq~ 929 (1392)
++|.|||+|+.. ..++...++.|+.|+.++.+++... ....||++||.+..-+.. ...
T Consensus 63 ~~d~vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~ 131 (286)
T 3gpi_A 63 RPEILVYCVAAS---------EYSDEHYRLSYVEGLRNTLSALEGA--PLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKD 131 (286)
T ss_dssp CCSEEEECHHHH---------HHC-----CCSHHHHHHHHHHTTTS--CCCEEEEEEEGGGCCCCCSSEECTTSCCCCCS
T ss_pred CCCEEEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHHhhC--CCCEEEEEcccEEEcCCCCCCCCCCCCCCCCC
Confidence 699999999862 2456677889999999999887642 457999999986532222 257
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCeEEEEcccc
Q psy1119 930 NYGMANSIMERICEARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~Glp~~ai~~g~~ 960 (1392)
.|+.+|...+.+ .. . ++.+.+..+.+
T Consensus 132 ~Y~~sK~~~E~~-~~--~--~~~~ilR~~~v 157 (286)
T 3gpi_A 132 FSGKRMLEAEAL-LA--A--YSSTILRFSGI 157 (286)
T ss_dssp HHHHHHHHHHHH-GG--G--SSEEEEEECEE
T ss_pred hhhHHHHHHHHH-Hh--c--CCeEEEecccc
Confidence 899999999999 43 2 88888877765
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=98.90 E-value=2e-08 Score=115.45 Aligned_cols=198 Identities=18% Similarity=0.213 Sum_probs=120.4
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC--------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD--------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~--------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
+.+++|+|+|+.+|+...|.++++.|.....++.++ ......+++++++.+...++.. ..+|+.|+|||
T Consensus 66 g~~p~vv~lhG~~~~~~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvG~S 142 (314)
T 3kxp_A 66 GSGPLMLFFHGITSNSAVFEPLMIRLSDRFTTIAVDQRGHGLSDKPETGYEANDYADDIAGLIRTL---ARGHAILVGHS 142 (314)
T ss_dssp CCSSEEEEECCTTCCGGGGHHHHHTTTTTSEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH---TSSCEEEEEET
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHcCCeEEEEeCCCcCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCcEEEEEC
Confidence 346899999999999999999999998888888876 1223458999999988887744 34689999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCcc-----------ccCCCCChHHHHHHHHhcCCccccCCHHHHHHHH
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLT-----------SLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLA 1294 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~-----------~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~ 1294 (1392)
|||.+|.++|.+..+ .+ .++++++.+..... .......+......+....+. ...+......
T Consensus 143 ~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 216 (314)
T 3kxp_A 143 LGARNSVTAAAKYPD---LVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDIKAVEAYLAGRYPN---IPADAIRIRA 216 (314)
T ss_dssp HHHHHHHHHHHHCGG---GEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSSHHHHHHHHHHHSTT---SCHHHHHHHH
T ss_pred chHHHHHHHHHhChh---heeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcCHHHHHHHHHhhccc---CchHHHHHHh
Confidence 999999999987532 35 78888876543210 000111122222211111111 0111111111
Q ss_pred HH----------------HHHHHHhhccccC-CCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-Ccc
Q psy1119 1295 HA----------------AYKRITSILKYTD-PKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHF 1355 (1392)
Q Consensus 1295 ~~----------------~~~~~~~~~~y~~-~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~ 1355 (1392)
.. ....+........ ....++++|++++.+++|. ........|.+.. ...+++.++| +|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~g~gH~ 295 (314)
T 3kxp_A 217 ESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRLR-PDLPVVVVPGADHY 295 (314)
T ss_dssp HHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHC-TTSCEEEETTCCSC
T ss_pred hhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEEEecCCCccCCHHHHHHHHHhC-CCceEEEcCCCCCc
Confidence 00 0000000000010 0123578999999999987 4444444555544 3468899996 999
Q ss_pred ccccChH
Q psy1119 1356 TVLDNIK 1362 (1392)
Q Consensus 1356 ~ml~~~~ 1362 (1392)
.+++++.
T Consensus 296 ~~~e~~~ 302 (314)
T 3kxp_A 296 VNEVSPE 302 (314)
T ss_dssp HHHHCHH
T ss_pred chhhCHH
Confidence 9888875
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=98.89 E-value=2.9e-08 Score=111.65 Aligned_cols=202 Identities=13% Similarity=0.063 Sum_probs=117.1
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCc-eEEEecC------CC--CCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQ-VLVFQFD------HT--NPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~-~~v~~l~------~e--~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
.++||+|+|+.+++...|.+++..|... ..|+.++ .. ....+++++++++.+.+... ...+++|+|||
T Consensus 20 ~~~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l---~~~~~~lvGhS 96 (275)
T 1a88_A 20 DGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAADVAALTEAL---DLRGAVHIGHS 96 (275)
T ss_dssp TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH---TCCSEEEEEET
T ss_pred CCceEEEECCCCCchhhHHHHHHHHHHCCceEEEEcCCcCCCCCCCCCCCCHHHHHHHHHHHHHHc---CCCceEEEEec
Confidence 3478999999999999999999999764 8888876 11 12358999999988887744 34589999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccC---CCCC--hHHH-----------HHHHHh-c-CCc---ccc
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLR---KLPD--WNAK-----------LNYFLD-L-MPE---DAT 1284 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~---~~~~--~~~~-----------l~~~~~-~-~~~---~~~ 1284 (1392)
|||.+|..+|.+. .-..+ .++++++.++....... .... ++.. +..+.. . ... ...
T Consensus 97 ~Gg~ia~~~a~~~--~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (275)
T 1a88_A 97 TGGGEVARYVARA--EPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGAT 174 (275)
T ss_dssp HHHHHHHHHHHHS--CTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCC
T ss_pred cchHHHHHHHHHh--CchheEEEEEecCCCcccccCccCcccCCHHHHHHHHHHHhhhHHHHHHhhhccccccccCcccc
Confidence 9999998866542 12345 88999986543211100 0000 0000 111111 0 000 001
Q ss_pred CCHHHHHHHHHH--------HHHHHHhhccccCC-CCCcccceEEEEeeCCCC-CCChhhcCc-ccccCCCeEEEEEcc-
Q psy1119 1285 HSRTYQRNLAHA--------AYKRITSILKYTDP-KHKAFGGNITLLRPTEQA-LPTAEDYGL-SKVCKKPVKVHFVDG- 1352 (1392)
Q Consensus 1285 ~~~~~l~~~~~~--------~~~~~~~~~~y~~~-~~~~~~~pi~l~~a~~~~-~~~~~~~~W-~~~~~g~v~v~~v~G- 1352 (1392)
.+++....+... ....+.....+... ...++++|++++.+++|. ........| .+.. ...+++.++|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 253 (275)
T 1a88_A 175 VSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELL-ANATLKSYEGL 253 (275)
T ss_dssp CCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHS-TTEEEEEETTC
T ss_pred cCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccccccCCCCEEEEecCCCccCCcHHHHHHHHhhC-CCcEEEEcCCC
Confidence 123332222111 11111111111111 123678999999999986 333322222 2332 4678999996
Q ss_pred CccccccChHH
Q psy1119 1353 NHFTVLDNIKS 1363 (1392)
Q Consensus 1353 ~H~~ml~~~~~ 1363 (1392)
+|+.++++|..
T Consensus 254 gH~~~~e~p~~ 264 (275)
T 1a88_A 254 PHGMLSTHPEV 264 (275)
T ss_dssp CTTHHHHCHHH
T ss_pred CccHHHhCHHH
Confidence 89999888753
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=98.88 E-value=4.7e-09 Score=116.93 Aligned_cols=205 Identities=17% Similarity=0.136 Sum_probs=122.3
Q ss_pred CceeEeecCCCccccc--cHHHHhhcC-CceEEEecC--------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1157 NNTIFMVPGIEGIATV--LEPLAKNIN-AQVLVFQFD--------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~--y~~La~~L~-~~~~v~~l~--------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
+++|+|+|+.+|+... +..+++.+. ..+.++.++ ......+++++++++.+.++.. ..+|+.|+||
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~~~~l---~~~~~~l~G~ 113 (270)
T 3llc_A 37 RPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGAFRDGTISRWLEEALAVLDHF---KPEKAILVGS 113 (270)
T ss_dssp SCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSCGGGCCHHHHHHHHHHHHHHH---CCSEEEEEEE
T ss_pred CCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCccccccHHHHHHHHHHHHHHh---ccCCeEEEEe
Confidence 5789999999998544 555777773 346677765 1223468999999998888744 3578999999
Q ss_pred chhHHHHHHHHHHHHHcC---Ccc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcC----Cccc-----cCCHHHHHH
Q psy1119 1226 SFGGMVALELAIKLEQLG---TKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLM----PEDA-----THSRTYQRN 1292 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G---~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~----~~~~-----~~~~~~l~~ 1292 (1392)
||||.+|+++|.+|++.. ..+ .++++++.+............ ......+.... .... ........
T Consensus 114 S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 191 (270)
T 3llc_A 114 SMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIEPLLG-DRERAELAENGYFEEVSEYSPEPNIFTRALME- 191 (270)
T ss_dssp THHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTTGGGCC-HHHHHHHHHHSEEEECCTTCSSCEEEEHHHHH-
T ss_pred ChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhhhhhhh-hhhhhhhhccCcccChhhcccchhHHHHHHHh-
Confidence 999999999999998876 666 677777654322111000111 11222221110 1100 01111111
Q ss_pred HHHHHHHHHHhhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCC-CeEEEEEc-cCccccccChHHHHHHHh
Q psy1119 1293 LAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKK-PVKVHFVD-GNHFTVLDNIKSAQIIMH 1369 (1392)
Q Consensus 1293 ~~~~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g-~v~v~~v~-G~H~~ml~~~~~~~i~~~ 1369 (1392)
....... .....++++|++++.+++|. ........|.+...+ ..+++.++ ++|+.. ..+....+...
T Consensus 192 -------~~~~~~~--~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~~~ 261 (270)
T 3llc_A 192 -------DGRANRV--MAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPADDVVLTLVRDGDHRLS-RPQDIDRMRNA 261 (270)
T ss_dssp -------HHHHTCC--TTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTSCSSSEEEEEETTCCSSCC-SHHHHHHHHHH
T ss_pred -------hhhhhhh--hhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCCCeeEEEeCCCccccc-ccccHHHHHHH
Confidence 1111111 12234688999999999987 554555556555443 48999998 588533 33344455555
Q ss_pred hhcccCC
Q psy1119 1370 EDSTDFK 1376 (1392)
Q Consensus 1370 l~~~L~~ 1376 (1392)
+.+.|++
T Consensus 262 i~~fl~~ 268 (270)
T 3llc_A 262 IRAMIEP 268 (270)
T ss_dssp HHHHHC-
T ss_pred HHHHhcC
Confidence 6555543
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=98.87 E-value=3.3e-08 Score=112.62 Aligned_cols=200 Identities=14% Similarity=0.139 Sum_probs=118.5
Q ss_pred CCCceeEeecCCC---ccccccHHHH-hhcCCceEEEecC------CCCC---CCCHHHHHHHHHHHHhhhccCCCCcEE
Q psy1119 1155 GNNNTIFMVPGIE---GIATVLEPLA-KNINAQVLVFQFD------HTNP---PDTIPEMADSLLPHFKKRLVHGTDEIK 1221 (1392)
Q Consensus 1155 g~~~pLF~vp~ag---G~~~~y~~La-~~L~~~~~v~~l~------~e~~---~~sieelA~~y~~~I~~~q~qp~gPy~ 1221 (1392)
|.++||+|+|+.+ ++...|.+++ ..|.....|+.++ ...+ ..+++++|+++.+.+... .-.+++
T Consensus 31 G~g~~vvllHG~~~~~~~~~~w~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~ 107 (286)
T 2puj_A 31 GNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL---DIDRAH 107 (286)
T ss_dssp CCSSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHHT---TCCCEE
T ss_pred CCCCcEEEECCCCCCCCcHHHHHHHHHHHHhccCEEEEECCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHh---CCCceE
Confidence 3457999999998 7777888888 8887778888876 1112 357999999998888643 346899
Q ss_pred EEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCC--------------CCChHHHHHHHHhc-CCccccC
Q psy1119 1222 LVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRK--------------LPDWNAKLNYFLDL-MPEDATH 1285 (1392)
Q Consensus 1222 L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~--------------~~~~~~~l~~~~~~-~~~~~~~ 1285 (1392)
|+||||||.||.++|.+- .+.+ .|+++++.+.... .... .+.++ .+..++.. .......
T Consensus 108 lvGhS~GG~va~~~A~~~---p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 182 (286)
T 2puj_A 108 LVGNAMGGATALNFALEY---PDRIGKLILMGPGGLGPS-MFAPMPMEGIKLLFKLYAEPSYE-TLKQMLQVFLYDQSLI 182 (286)
T ss_dssp EEEETHHHHHHHHHHHHC---GGGEEEEEEESCSCCCCC-SSSCSSCHHHHHHHHHHHSCCHH-HHHHHHHHHCSCGGGC
T ss_pred EEEECHHHHHHHHHHHhC---hHhhheEEEECccccCCC-cccccchhhHHHHHHHhhCCcHH-HHHHHHHHHhcCCccC
Confidence 999999999999999863 2345 8899987542110 0000 01111 11112111 1111111
Q ss_pred CHHHHHHHHH------H-HHHHHHhh-----ccccC-CCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEc
Q psy1119 1286 SRTYQRNLAH------A-AYKRITSI-----LKYTD-PKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVD 1351 (1392)
Q Consensus 1286 ~~~~l~~~~~------~-~~~~~~~~-----~~y~~-~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~ 1351 (1392)
+++....... . +....... ..+.. .....+++|++++.+++|. ........+.+... ..+++.++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~-~~~~~~i~ 261 (286)
T 2puj_A 183 TEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNID-DARLHVFS 261 (286)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSS-SEEEEEES
T ss_pred CHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCHHHHHHHHHHCC-CCeEEEeC
Confidence 2232222111 0 01111100 01111 1234688999999999987 44444444545443 46888998
Q ss_pred c-CccccccChHH
Q psy1119 1352 G-NHFTVLDNIKS 1363 (1392)
Q Consensus 1352 G-~H~~ml~~~~~ 1363 (1392)
| +|+.++++|..
T Consensus 262 ~~gH~~~~e~p~~ 274 (286)
T 2puj_A 262 KCGAWAQWEHADE 274 (286)
T ss_dssp SCCSCHHHHTHHH
T ss_pred CCCCCccccCHHH
Confidence 5 99999988753
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=98.87 E-value=5.9e-08 Score=109.92 Aligned_cols=203 Identities=15% Similarity=0.159 Sum_probs=117.5
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCC-ceEEEecC------CCC--CCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD------HTN--PPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~------~e~--~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
|.++||+|+|+.+|+...|..++..|.. ...|+.++ ... ..-+++++|+++.+.+... .-.+++|+||
T Consensus 25 G~g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l---~~~~~~lvGh 101 (281)
T 3fob_A 25 GTGKPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGYEYDTFTSDLHQLLEQL---ELQNVTLVGF 101 (281)
T ss_dssp SSSEEEEEECCTTCCGGGGTTTHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHT---TCCSEEEEEE
T ss_pred CCCCeEEEECCCCCcHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCccccCHHHHHHHHHHHHHHc---CCCcEEEEEE
Confidence 4568999999999999999998888854 48888876 111 2358999999988887743 3468999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccC---CCCC---hHH-----------HHHHHHhc-CCc---cc
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLR---KLPD---WNA-----------KLNYFLDL-MPE---DA 1283 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~---~~~~---~~~-----------~l~~~~~~-~~~---~~ 1283 (1392)
||||.+|...|.+. .-..+ .|+++++.++....... .... .+. .+..+... ... ..
T Consensus 102 S~GG~i~~~~~a~~--~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (281)
T 3fob_A 102 SMGGGEVARYISTY--GTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLAFLDEFTKGFFAAGDRTD 179 (281)
T ss_dssp TTHHHHHHHHHHHH--CSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCC
T ss_pred CccHHHHHHHHHHc--cccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhHHHHHHHHHHHhcccccccc
Confidence 99999877665543 12345 78899886654311100 0111 000 01111111 110 01
Q ss_pred cCCHHHHHHHH--------HHHHHHHHhhccccCC-CCCcccceEEEEeeCCCC-CCChhhcC-cccccCCCeEEEEEcc
Q psy1119 1284 THSRTYQRNLA--------HAAYKRITSILKYTDP-KHKAFGGNITLLRPTEQA-LPTAEDYG-LSKVCKKPVKVHFVDG 1352 (1392)
Q Consensus 1284 ~~~~~~l~~~~--------~~~~~~~~~~~~y~~~-~~~~~~~pi~l~~a~~~~-~~~~~~~~-W~~~~~g~v~v~~v~G 1352 (1392)
...+....... ......+.....+... ...++++|++++.+++|. ...+.... +.+.. ...+++.++|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~-p~~~~~~i~~ 258 (281)
T 3fob_A 180 LVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAI-PNSKVALIKG 258 (281)
T ss_dssp SSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHS-TTCEEEEETT
T ss_pred cchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEEEecCCCCCcCHHHHHHHHHHhC-CCceEEEeCC
Confidence 11222221111 0111112222222111 124688999999999987 33332212 23333 4578999985
Q ss_pred -CccccccChHH
Q psy1119 1353 -NHFTVLDNIKS 1363 (1392)
Q Consensus 1353 -~H~~ml~~~~~ 1363 (1392)
+|+.++++|..
T Consensus 259 ~gH~~~~e~p~~ 270 (281)
T 3fob_A 259 GPHGLNATHAKE 270 (281)
T ss_dssp CCTTHHHHTHHH
T ss_pred CCCchhhhhHHH
Confidence 89999988864
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=98.87 E-value=5.9e-08 Score=108.92 Aligned_cols=98 Identities=18% Similarity=0.239 Sum_probs=73.4
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCC-ceEEEecC------CC--CCCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD------HT--NPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~------~e--~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
|.++||+|+|+.+++...|.+++..|.. .+.|+.++ .. ....+++++|+++.+.+... +..+++|+||
T Consensus 17 G~g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~d~~~~l~~l---~~~~~~lvGh 93 (271)
T 3ia2_A 17 GSGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEHL---DLKEVTLVGF 93 (271)
T ss_dssp SSSSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH---TCCSEEEEEE
T ss_pred CCCCeEEEECCCCCcHHHHHHHHHHHHhCCceEEEecCCCCccCCCCCCCCCHHHHHHHHHHHHHHh---CCCCceEEEE
Confidence 4568999999999999999999999864 57888876 11 12468999999988887743 3568999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCC
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAPDY 1257 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~ 1257 (1392)
||||.++..++.+. .-..+ .|+++++.++.
T Consensus 94 S~GG~~~~~~~a~~--~p~~v~~lvl~~~~~~~ 124 (271)
T 3ia2_A 94 SMGGGDVARYIARH--GSARVAGLVLLGAVTPL 124 (271)
T ss_dssp TTHHHHHHHHHHHH--CSTTEEEEEEESCCCSB
T ss_pred cccHHHHHHHHHHh--CCcccceEEEEccCCcc
Confidence 99998666554432 12345 88899876543
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=98.87 E-value=2.3e-08 Score=115.37 Aligned_cols=147 Identities=18% Similarity=0.167 Sum_probs=103.3
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCC-cc-cH-HHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSG-VK-NG-YQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~-~~-~~-~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
.++++||||+|+||.++++.|+++|.+ |+.++|+. .. .+ .....++.+...| +.++.+|++|.+++.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~~~l~~~~--v~~v~~D~~d~~~l~~~~~--- 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNP-TYALVRKTITAANPETKEELIDNYQSLG--VILLEGDINDHETLVKAIK--- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCC-EEEEECCSCCSSCHHHHHHHHHHHHHTT--CEEEECCTTCHHHHHHHHT---
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCc-EEEEECCCcccCChHHHHHHHHHHHhCC--CEEEEeCCCCHHHHHHHHh---
Confidence 357999999999999999999999986 77778875 11 11 2222234444556 4567899999998887765
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC-CCeEEEecccccc-----cCCCCChhH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT-LGQFVVFSSVSCG-----RGNAGQTNY 931 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~-l~~fV~~SS~s~~-----~G~~gq~~Y 931 (1392)
.+|+|||+|+... +.++.++.+++... . ..+|| +|+.... .+.++...|
T Consensus 76 ---~~d~vi~~a~~~~-------------------~~~~~~l~~aa~~~--g~v~~~v-~S~~g~~~~~~~~~~p~~~~y 130 (307)
T 2gas_A 76 ---QVDIVICAAGRLL-------------------IEDQVKIIKAIKEA--GNVKKFF-PSEFGLDVDRHDAVEPVRQVF 130 (307)
T ss_dssp ---TCSEEEECSSSSC-------------------GGGHHHHHHHHHHH--CCCSEEE-CSCCSSCTTSCCCCTTHHHHH
T ss_pred ---CCCEEEECCcccc-------------------cccHHHHHHHHHhc--CCceEEe-ecccccCcccccCCCcchhHH
Confidence 5999999998642 34566777766543 3 56777 3443211 123446789
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEEEccccCc
Q psy1119 932 GMANSIMERICEARRAEGLPGLAVEWGAVGE 962 (1392)
Q Consensus 932 aaana~ld~la~~r~~~Glp~~ai~~g~~~~ 962 (1392)
.+|..++.+.+ ..|++.+.+..|.+.+
T Consensus 131 -~sK~~~e~~~~---~~~i~~~~lrp~~~~~ 157 (307)
T 2gas_A 131 -EEKASIRRVIE---AEGVPYTYLCCHAFTG 157 (307)
T ss_dssp -HHHHHHHHHHH---HHTCCBEEEECCEETT
T ss_pred -HHHHHHHHHHH---HcCCCeEEEEcceeec
Confidence 99999998875 4689999998877654
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.87 E-value=3e-08 Score=112.81 Aligned_cols=209 Identities=12% Similarity=0.131 Sum_probs=118.6
Q ss_pred Cc-eeEeecCCC---ccccccHHHH-hhcCCceEEEecC------CCCC---CCCHHHHHHHHHHHHhhhccCCCCcEEE
Q psy1119 1157 NN-TIFMVPGIE---GIATVLEPLA-KNINAQVLVFQFD------HTNP---PDTIPEMADSLLPHFKKRLVHGTDEIKL 1222 (1392)
Q Consensus 1157 ~~-pLF~vp~ag---G~~~~y~~La-~~L~~~~~v~~l~------~e~~---~~sieelA~~y~~~I~~~q~qp~gPy~L 1222 (1392)
++ ||+|+|+.+ ++...|.++. ..|.....|+.++ ...+ ..+++++++.+.+.+... ...+++|
T Consensus 35 g~~~vvllHG~~~~~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~l 111 (289)
T 1u2e_A 35 GDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARILKSVVDQL---DIAKIHL 111 (289)
T ss_dssp CSSEEEEECCCSTTCCHHHHTTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHHT---TCCCEEE
T ss_pred CCceEEEECCCCcccchhHHHHHhhhHHHhcCCeEEEEcCCCCCCCCCCCccccCHHHHHHHHHHHHHHh---CCCceEE
Confidence 45 899999998 5566777766 7777667888876 1111 357889998887777633 3468999
Q ss_pred EeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCC--------------CChHHHHHHHHhcCC-ccccCC
Q psy1119 1223 VGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKL--------------PDWNAKLNYFLDLMP-EDATHS 1286 (1392)
Q Consensus 1223 ~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~--------------~~~~~~l~~~~~~~~-~~~~~~ 1286 (1392)
+||||||.+|+++|.+-. +.+ .++++++.+.... ..... +.. +.+..++.... ......
T Consensus 112 vGhS~GG~ia~~~a~~~p---~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 186 (289)
T 1u2e_A 112 LGNSMGGHSSVAFTLKWP---ERVGKLVLMGGGTGGMS-LFTPMPTEGIKRLNQLYRQPTI-ENLKLMMDIFVFDTSDLT 186 (289)
T ss_dssp EEETHHHHHHHHHHHHCG---GGEEEEEEESCSCCCCC-SSSCSSCHHHHHHHHHHHSCCH-HHHHHHHHTTSSCTTSCC
T ss_pred EEECHhHHHHHHHHHHCH---HhhhEEEEECCCccccc-cccccchhhHHHHHHHHhcchH-HHHHHHHHHhhcCcccCC
Confidence 999999999999997643 245 7888887542110 00000 111 11122222111 111112
Q ss_pred HHHHHHHHH-------HHHHHHHhh-----ccccC-CCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc
Q psy1119 1287 RTYQRNLAH-------AAYKRITSI-----LKYTD-PKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG 1352 (1392)
Q Consensus 1287 ~~~l~~~~~-------~~~~~~~~~-----~~y~~-~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G 1352 (1392)
++....... .+...+... ..+.. .....+++|++++.+++|. ........+.+... ..+++.++|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~ 265 (289)
T 1u2e_A 187 DALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIA-GSELHIFRD 265 (289)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHST-TCEEEEESS
T ss_pred HHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhhCC-CcEEEEeCC
Confidence 222221111 011111111 11111 1234678999999999987 44444444555443 468888984
Q ss_pred -CccccccChHHHHHHHhhhcccCC
Q psy1119 1353 -NHFTVLDNIKSAQIIMHEDSTDFK 1376 (1392)
Q Consensus 1353 -~H~~ml~~~~~~~i~~~l~~~L~~ 1376 (1392)
+|+.++++|.. ....+.+.|.+
T Consensus 266 ~gH~~~~e~p~~--~~~~i~~fl~~ 288 (289)
T 1u2e_A 266 CGHWAQWEHADA--FNQLVLNFLAR 288 (289)
T ss_dssp CCSCHHHHTHHH--HHHHHHHHHTC
T ss_pred CCCchhhcCHHH--HHHHHHHHhcC
Confidence 99999988753 33444444443
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=1.8e-08 Score=112.14 Aligned_cols=96 Identities=13% Similarity=0.125 Sum_probs=77.0
Q ss_pred CCceeEeecCCCccccccHHHHhhcCC-ceEEEecC------CCCC---CCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD------HTNP---PDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~------~e~~---~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
.+++|+|+|+.+|+...|.++++.|.. ...|+.++ ...+ ..+++++++.+.+.++.. .+.+|++|+||
T Consensus 11 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~l~~l--~~~~~~~lvGh 88 (267)
T 3sty_A 11 VKKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASL--PANEKIILVGH 88 (267)
T ss_dssp CCCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHTS--CTTSCEEEEEE
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccccCCCCCCcCCccCCHHHHHHHHHHHHHhc--CCCCCEEEEEE
Confidence 357999999999999999999999976 47888876 1111 369999999999988743 24679999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
||||.+|+++|.+.. ..+ .++++++..+
T Consensus 89 S~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~ 117 (267)
T 3sty_A 89 ALGGLAISKAMETFP---EKISVAVFLSGLMP 117 (267)
T ss_dssp TTHHHHHHHHHHHSG---GGEEEEEEESCCCC
T ss_pred cHHHHHHHHHHHhCh---hhcceEEEecCCCC
Confidence 999999999997643 345 7888988554
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=98.87 E-value=6.3e-09 Score=116.29 Aligned_cols=200 Identities=13% Similarity=0.158 Sum_probs=119.4
Q ss_pred CCCceeEeecCCCccccccHHHHhh-cCCceEEEecC----C--CCC-----CCCHHHHHHHHHHHHhhhccCCCCcEEE
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKN-INAQVLVFQFD----H--TNP-----PDTIPEMADSLLPHFKKRLVHGTDEIKL 1222 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~-L~~~~~v~~l~----~--e~~-----~~sieelA~~y~~~I~~~q~qp~gPy~L 1222 (1392)
+.++||+|+|+.+|+...|.+++.. +.....++.++ + ..+ ..+++++++.+.+.++.. +..|++|
T Consensus 22 ~~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l 98 (279)
T 4g9e_A 22 GEGAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSYSMEGYADAMTEVMQQL---GIADAVV 98 (279)
T ss_dssp CCEEEEEEECCTTCCGGGGHHHHHSHHHHHEEEEEECCTTSTTSCCCSCHHHHSSHHHHHHHHHHHHHHH---TCCCCEE
T ss_pred CCCCeEEEECCCCCchhHHHHHHhHHHhcCCeEEeecCCCCCCCCCCCCcccCCCHHHHHHHHHHHHHHh---CCCceEE
Confidence 4457899999999999999999999 66778888876 1 111 248999999988888743 3468999
Q ss_pred EeechhHHHHHHHHHHHHHcCCccEEEEEeCCCCCCcc-------------ccCCCCChHHHHHHHHhcCCccccCCHHH
Q psy1119 1223 VGFSFGGMVALELAIKLEQLGTKCHLYLVDSAPDYVLT-------------SLRKLPDWNAKLNYFLDLMPEDATHSRTY 1289 (1392)
Q Consensus 1223 ~G~S~Gg~VA~EmA~~Le~~G~~v~LvLiD~~p~~~~~-------------~l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1289 (1392)
+||||||.+|+.+|.+.. ....++++++++..... ....... ...+..+....... .....+
T Consensus 99 vG~S~Gg~~a~~~a~~~p---~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~ 173 (279)
T 4g9e_A 99 FGWSLGGHIGIEMIARYP---EMRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFS-ERDVESYARSTCGE-PFEASL 173 (279)
T ss_dssp EEETHHHHHHHHHTTTCT---TCCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCCC-HHHHHHHHHHHHCS-SCCHHH
T ss_pred EEECchHHHHHHHHhhCC---cceeEEEecCCCCCCCccchhhccchhhhhcCccccc-HHHHHHHHHhhccC-cccHHH
Confidence 999999999999987642 23488888876543210 0000111 11222222111100 011122
Q ss_pred HHHHH-------HHHHHHHHhhccccCC-CCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-Ccccccc
Q psy1119 1290 QRNLA-------HAAYKRITSILKYTDP-KHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHFTVLD 1359 (1392)
Q Consensus 1290 l~~~~-------~~~~~~~~~~~~y~~~-~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~~ml~ 1359 (1392)
...+. ..+...+.....+... ...++++|++++.++.|. ........+..-.....+++.++| +|+.+++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 253 (279)
T 4g9e_A 174 LDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVELDFVSKVKFGNLWEGKTHVIDNAGHAPFRE 253 (279)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTCSSBCHHHHTTCCCSSBGGGSCEEETTCCSCHHHH
T ss_pred HHHHHhhhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCCcccchHHHHHHhhccCCCCeEEEECCCCcchHHh
Confidence 21111 1111122221222111 123578999999999987 444444444411223467889996 9999988
Q ss_pred ChH
Q psy1119 1360 NIK 1362 (1392)
Q Consensus 1360 ~~~ 1362 (1392)
++.
T Consensus 254 ~p~ 256 (279)
T 4g9e_A 254 APA 256 (279)
T ss_dssp SHH
T ss_pred CHH
Confidence 875
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=3.4e-08 Score=116.28 Aligned_cols=244 Identities=14% Similarity=0.084 Sum_probs=151.0
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
.++++||||+|.||.++++.|+++|.+ |++++|+..........++.+...| +.++.+|++|.+++.+++++.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~~~~~~~~~~~~~l~~~~--v~~~~~Dl~d~~~l~~~~~~~---- 82 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRP-TYILARPGPRSPSKAKIFKALEDKG--AIIVYGLINEQEAMEKILKEH---- 82 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHHHHHHTT--CEEEECCTTCHHHHHHHHHHT----
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCC-EEEEECCCCCChhHHHHHHHHHhCC--cEEEEeecCCHHHHHHHHhhC----
Confidence 468999999999999999999999976 8888887644444444455566555 456789999999999888753
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccC----CCCChhHHHHHH
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRG----NAGQTNYGMANS 936 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G----~~gq~~Yaaana 936 (1392)
.+|.|||+|+. .++.++.+|.+++.... ...+||. |+...... ......|+.+|.
T Consensus 83 ~~d~Vi~~a~~-------------------~n~~~~~~l~~aa~~~g-~v~~~v~-S~~g~~~~e~~~~~p~~~y~~sK~ 141 (346)
T 3i6i_A 83 EIDIVVSTVGG-------------------ESILDQIALVKAMKAVG-TIKRFLP-SEFGHDVNRADPVEPGLNMYREKR 141 (346)
T ss_dssp TCCEEEECCCG-------------------GGGGGHHHHHHHHHHHC-CCSEEEC-SCCSSCTTTCCCCTTHHHHHHHHH
T ss_pred CCCEEEECCch-------------------hhHHHHHHHHHHHHHcC-CceEEee-cccCCCCCccCcCCCcchHHHHHH
Confidence 69999999986 26778889888876541 2567774 54332211 134568999999
Q ss_pred HHHHHHHHHHHcCCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccCCCeEEehhhhhhhcCC
Q psy1119 937 IMERICEARRAEGLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKKAGS 1016 (1392)
Q Consensus 937 ~ld~la~~r~~~Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~ 1016 (1392)
.++.+.+. .|++.+.+..|.+.+.... .... . . ......... ....-......-
T Consensus 142 ~~e~~l~~---~g~~~tivrpg~~~g~~~~-~~~~---~-----------------~-~~~~~~~~~-~~~g~g~~~~~~ 195 (346)
T 3i6i_A 142 RVRQLVEE---SGIPFTYICCNSIASWPYY-NNIH---P-----------------S-EVLPPTDFF-QIYGDGNVKAYF 195 (346)
T ss_dssp HHHHHHHH---TTCCBEEEECCEESSCCCS-CC--------------------------CCCCSSCE-EEETTSCCCEEE
T ss_pred HHHHHHHH---cCCCEEEEEecccccccCc-cccc---c-----------------c-cccCCCceE-EEccCCCceEEe
Confidence 99988764 7999999998766442110 0000 0 0 000000000 000000000000
Q ss_pred CCcchHHHHHHHHhCCCCCcccCcCcchhhcC-cchhhHHHHHHHHHHHhCCccChhhhccCCHHHHHHH
Q psy1119 1017 GGATNIVDAVINILGLRDLKTVSLHSTLAELG-MDSMMAVEIKQTLEREFEVFLTPQDIRGLTFAKLQDI 1085 (1392)
Q Consensus 1017 ~~~~~l~~~~a~~l~~~~~~~i~~~~~l~~lG-~DSL~avel~~~l~~~~~~~l~~~~i~~~ti~~La~~ 1085 (1392)
-..+.+++.++.++.- .+.. ...+.-.| .+.+.--|+...+.+.+|..++.. ..+..++.+.
T Consensus 196 i~~~Dva~~~~~~l~~--~~~~--~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~---~~~~~~~~~~ 258 (346)
T 3i6i_A 196 VAGTDIGKFTMKTVDD--VRTL--NKSVHFRPSCNCLNINELASVWEKKIGRTLPRV---TVTEDDLLAA 258 (346)
T ss_dssp ECHHHHHHHHHHHTTC--GGGT--TEEEECCCGGGEECHHHHHHHHHHHHTSCCCEE---EECHHHHHHH
T ss_pred cCHHHHHHHHHHHHhC--cccc--CeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceE---ecCHHHHHHH
Confidence 0124577777777653 1211 22233234 578888999999999999876543 3355555443
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=98.86 E-value=3.2e-09 Score=117.70 Aligned_cols=94 Identities=22% Similarity=0.271 Sum_probs=75.3
Q ss_pred ceeEeecCCCccccccHHHHhhcCCc-eEEEecC------CCCC---CCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1158 NTIFMVPGIEGIATVLEPLAKNINAQ-VLVFQFD------HTNP---PDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~~y~~La~~L~~~-~~v~~l~------~e~~---~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
+||+|+|+.+|+...|.++++.|... ..++.++ ...+ ..+++++++.+.+.++.. ...+|++|+||||
T Consensus 5 ~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l--~~~~~~~lvGhS~ 82 (258)
T 3dqz_A 5 HHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLKSL--PENEEVILVGFSF 82 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSSCGGGCCSHHHHHHHHHHHHHTS--CTTCCEEEEEETT
T ss_pred CcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCCCcCCCCCCCccccHHHhHHHHHHHHHHh--cccCceEEEEeCh
Confidence 79999999999999999999999764 7888876 1111 369999999999988743 2347999999999
Q ss_pred hHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1228 GGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
||.+|.++|.+.. ..+ .++++++..+
T Consensus 83 Gg~~a~~~a~~~p---~~v~~lvl~~~~~~ 109 (258)
T 3dqz_A 83 GGINIALAADIFP---AKIKVLVFLNAFLP 109 (258)
T ss_dssp HHHHHHHHHTTCG---GGEEEEEEESCCCC
T ss_pred hHHHHHHHHHhCh---HhhcEEEEecCCCC
Confidence 9999999987532 345 7888988544
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=98.86 E-value=3.7e-08 Score=111.21 Aligned_cols=96 Identities=13% Similarity=0.194 Sum_probs=76.3
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCC--C----CCHHHHHHHHHHHHhhhccCCC-CcEE
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNP--P----DTIPEMADSLLPHFKKRLVHGT-DEIK 1221 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~--~----~sieelA~~y~~~I~~~q~qp~-gPy~ 1221 (1392)
|.++||+|+|+.+|+...|.++++.|.....|+.++ ...+ . .+++++++.+.+.++.. .. .|++
T Consensus 26 g~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~ 102 (297)
T 2qvb_A 26 GKGDAIVFQHGNPTSSYLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDRYSYGEQRDFLFALWDAL---DLGDHVV 102 (297)
T ss_dssp SSSSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHHHHHHHHHHHHT---TCCSCEE
T ss_pred CCCCeEEEECCCCchHHHHHHHHHHHhhcCeEEEEcCCCCCCCCCCCCccccCcCHHHHHHHHHHHHHHc---CCCCceE
Confidence 345899999999999999999999998777888875 1111 2 58999999998888743 33 7899
Q ss_pred EEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1222 LVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1222 L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
|+||||||.+|+++|.+.. ..+ .++++++.+.
T Consensus 103 lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~ 135 (297)
T 2qvb_A 103 LVLHDWGSALGFDWANQHR---DRVQGIAFMEAIVT 135 (297)
T ss_dssp EEEEEHHHHHHHHHHHHSG---GGEEEEEEEEECCS
T ss_pred EEEeCchHHHHHHHHHhCh---HhhheeeEeccccC
Confidence 9999999999999997643 235 7888887553
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.85 E-value=2.3e-08 Score=113.82 Aligned_cols=94 Identities=21% Similarity=0.308 Sum_probs=74.7
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCc-eEEEecC------CCC---CCCCHHHHHHHHHHHHhhhccCCCCcEEEEe
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQ-VLVFQFD------HTN---PPDTIPEMADSLLPHFKKRLVHGTDEIKLVG 1224 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~-~~v~~l~------~e~---~~~sieelA~~y~~~I~~~q~qp~gPy~L~G 1224 (1392)
+.+++|+|+|+.+|+...|..+++.|... ..++.++ ... ...+++++++.+.+.++.. +..|+.|+|
T Consensus 44 ~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G 120 (315)
T 4f0j_A 44 ANGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSFQQLAANTHALLERL---GVARASVIG 120 (315)
T ss_dssp CCSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCCCHHHHHHHHHHHHHHT---TCSCEEEEE
T ss_pred CCCCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCCCCCCCCCCccccCHHHHHHHHHHHHHHh---CCCceEEEE
Confidence 45689999999999999999999999864 7888876 111 1568999999998888743 345899999
Q ss_pred echhHHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1225 FSFGGMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1225 ~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
|||||.+|+.+|.+.. ..+ .++++++.
T Consensus 121 ~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~ 148 (315)
T 4f0j_A 121 HSMGGMLATRYALLYP---RQVERLVLVNPI 148 (315)
T ss_dssp ETHHHHHHHHHHHHCG---GGEEEEEEESCS
T ss_pred ecHHHHHHHHHHHhCc---HhhheeEEecCc
Confidence 9999999999998643 235 77888764
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.85 E-value=2.5e-08 Score=115.38 Aligned_cols=151 Identities=14% Similarity=0.145 Sum_probs=106.9
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCccc-HHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKN-GYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~-~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.++++||||+|+||.++++.|+++|.+ |++++|+.... +.....++.+...| +.++.+|++|++++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~~~~~~--~~~~~~D~~d~~~l~~~~~----- 75 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHP-TYVLFRPEVVSNIDKVQMLLYFKQLG--AKLIEASLDDHQRLVDALK----- 75 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCSCCSSCHHHHHHHHHHHTTT--CEEECCCSSCHHHHHHHHT-----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCc-EEEEECCCcccchhHHHHHHHHHhCC--eEEEeCCCCCHHHHHHHHh-----
Confidence 467999999999999999999999986 78888875332 22222334444455 5567899999998887764
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccC------CCCChhHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRG------NAGQTNYGM 933 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G------~~gq~~Yaa 933 (1392)
.+|.|||+|+..... .++.++.++.+++... ....+||. |+...... .++...| .
T Consensus 76 -~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa~~~-g~v~~~v~-S~~g~~~~~~~~~~~p~~~~y-~ 136 (313)
T 1qyd_A 76 -QVDVVISALAGGVLS---------------HHILEQLKLVEAIKEA-GNIKRFLP-SEFGMDPDIMEHALQPGSITF-I 136 (313)
T ss_dssp -TCSEEEECCCCSSSS---------------TTTTTHHHHHHHHHHS-CCCSEEEC-SCCSSCTTSCCCCCSSTTHHH-H
T ss_pred -CCCEEEECCccccch---------------hhHHHHHHHHHHHHhc-CCCceEEe-cCCcCCccccccCCCCCcchH-H
Confidence 589999999975431 2466778887777653 11567873 44322111 2456788 9
Q ss_pred HHHHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 934 ANSIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 934 ana~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
+|..++.+.+ ..|++.+.+..|.+.
T Consensus 137 sK~~~e~~~~---~~g~~~~ilrp~~~~ 161 (313)
T 1qyd_A 137 DKRKVRRAIE---AASIPYTYVSSNMFA 161 (313)
T ss_dssp HHHHHHHHHH---HTTCCBCEEECCEEH
T ss_pred HHHHHHHHHH---hcCCCeEEEEeceec
Confidence 9999998875 468998888876654
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=98.85 E-value=4.1e-08 Score=112.33 Aligned_cols=206 Identities=14% Similarity=0.113 Sum_probs=120.6
Q ss_pred ceeEeecCCC---ccccccHHHHhhcCCceEEEecC------CCCC---CCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1158 NTIFMVPGIE---GIATVLEPLAKNINAQVLVFQFD------HTNP---PDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1158 ~pLF~vp~ag---G~~~~y~~La~~L~~~~~v~~l~------~e~~---~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
+||+|+|+.+ ++...|.+++..|.....|+.++ ...+ ..+++++|+++.+.++.. .-.+++|+||
T Consensus 37 ~~vvllHG~~pg~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~lvGh 113 (291)
T 2wue_A 37 QTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEHGQFNRYAAMALKGLFDQL---GLGRVPLVGN 113 (291)
T ss_dssp SEEEEECCCCTTCCHHHHTTTTHHHHTTTSEEEEECCTTSTTSCCCSCCSSHHHHHHHHHHHHHHHH---TCCSEEEEEE
T ss_pred CcEEEECCCCCccchHHHHHHHHHHHHhcCEEEEECCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHh---CCCCeEEEEE
Confidence 4999999998 77778888888888778888876 1222 357999999998888744 3468999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCC--------------CCChHHHHHHHHhcCC-ccccCCHHH
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRK--------------LPDWNAKLNYFLDLMP-EDATHSRTY 1289 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~--------------~~~~~~~l~~~~~~~~-~~~~~~~~~ 1289 (1392)
||||.||.++|.+- -+.+ .|+++++.+.... .... .+.+ +.+..++.... .....+++.
T Consensus 114 S~Gg~ia~~~A~~~---p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 188 (291)
T 2wue_A 114 ALGGGTAVRFALDY---PARAGRLVLMGPGGLSIN-LFAPDPTEGVKRLSKFSVAPTR-ENLEAFLRVMVYDKNLITPEL 188 (291)
T ss_dssp THHHHHHHHHHHHS---TTTEEEEEEESCSSSCCC-SSSCSSCHHHHHHHHHHHSCCH-HHHHHHHHTSCSSGGGSCHHH
T ss_pred ChhHHHHHHHHHhC---hHhhcEEEEECCCCCCcc-ccccccchhhHHHHHHhccCCH-HHHHHHHHHhccCcccCCHHH
Confidence 99999999999863 3346 8899987542110 0000 0111 11222222111 111112222
Q ss_pred HHHHHHH------HHHHHHh---hc---cccC---CCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-
Q psy1119 1290 QRNLAHA------AYKRITS---IL---KYTD---PKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG- 1352 (1392)
Q Consensus 1290 l~~~~~~------~~~~~~~---~~---~y~~---~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G- 1352 (1392)
....... +...+.. .. .+.. .....+++|++++.+++|. ........+.+... ..+++.++|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~p-~~~~~~i~~~ 267 (291)
T 2wue_A 189 VDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKTIP-RAQLHVFGQC 267 (291)
T ss_dssp HHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSSSCGGGGHHHHHHST-TEEEEEESSC
T ss_pred HHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecCCCCCCCHHHHHHHHHHCC-CCeEEEeCCC
Confidence 2211110 0111111 11 1111 2234688999999999987 43333334444443 468899985
Q ss_pred CccccccChHHHHHHHhhhccc
Q psy1119 1353 NHFTVLDNIKSAQIIMHEDSTD 1374 (1392)
Q Consensus 1353 ~H~~ml~~~~~~~i~~~l~~~L 1374 (1392)
+|+.++++|.. ....+.+.|
T Consensus 268 gH~~~~e~p~~--~~~~i~~fl 287 (291)
T 2wue_A 268 GHWVQVEKFDE--FNKLTIEFL 287 (291)
T ss_dssp CSCHHHHTHHH--HHHHHHHHT
T ss_pred CCChhhhCHHH--HHHHHHHHH
Confidence 89999988753 333344444
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=7.2e-08 Score=108.74 Aligned_cols=195 Identities=17% Similarity=0.151 Sum_probs=113.9
Q ss_pred CceeEeecCCCccccccHHHHhhcCC-ceEEEecC----C-----CCCCCCHHHHHHHHHHHHhhhc-cCCCCcEEEEee
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD----H-----TNPPDTIPEMADSLLPHFKKRL-VHGTDEIKLVGF 1225 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~----~-----e~~~~sieelA~~y~~~I~~~q-~qp~gPy~L~G~ 1225 (1392)
+++|+|+|+.+++...|..+++.|.. .+.++.++ + .....+++++++++.+.+.... ..+.+|+.|+||
T Consensus 42 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~l~G~ 121 (303)
T 3pe6_A 42 KALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGH 121 (303)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCSSTTCCSSTHHHHHHHHHHHHHHHHHSTTCCEEEEEE
T ss_pred CeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhccCCceEEEEEe
Confidence 46799999999999999999999976 57788775 1 1123578888887776665321 124568999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccC-------------------------CCCChHHHHHHHHhc-
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLR-------------------------KLPDWNAKLNYFLDL- 1278 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~-------------------------~~~~~~~~l~~~~~~- 1278 (1392)
||||.+|..+|.+.. ..+ .++++++.......... ...........+...
T Consensus 122 S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (303)
T 3pe6_A 122 SMGGAIAILTAAERP---GHFAGMVLISPLVLANPESATTFKVLAAKVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDP 198 (303)
T ss_dssp THHHHHHHHHHHHST---TTCSEEEEESCSSSBCHHHHHHHHHHHHHHHHTTCCSCCCCCCCGGGTCSCHHHHHHHHTCT
T ss_pred CHHHHHHHHHHHhCc---ccccEEEEECccccCchhccHHHHHHHHHHHHHhcccccCCccchhhhhcchhHHHHhccCc
Confidence 999999999997642 335 78888764322100000 000000111111100
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHhhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCC-CeEEEEEcc-Ccc
Q psy1119 1279 MPEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKK-PVKVHFVDG-NHF 1355 (1392)
Q Consensus 1279 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g-~v~v~~v~G-~H~ 1355 (1392)
.................... ++ . ....++++|++++.+.+|. ........|.+...+ ..+++.++| +|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~-~~---~----~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 270 (303)
T 3pe6_A 199 LICRAGLKVCFGIQLLNAVS-RV---E----RALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHV 270 (303)
T ss_dssp TSCCSCCCHHHHHHHHHHHH-HH---H----HHGGGCCSCEEEEEETTCSSBCHHHHHHHHHHCCCSSEEEEEETTCCSC
T ss_pred cccccchhhhhHHHHHHHHH-HH---H----HHhhcCCCCEEEEeeCCCCCCChHHHHHHHHhcccCCceEEEeCCCccc
Confidence 00000001111111111110 10 0 0112578999999999987 444444455555443 588999997 899
Q ss_pred ccccChH
Q psy1119 1356 TVLDNIK 1362 (1392)
Q Consensus 1356 ~ml~~~~ 1362 (1392)
.+++++.
T Consensus 271 ~~~~~p~ 277 (303)
T 3pe6_A 271 LHKELPE 277 (303)
T ss_dssp GGGSCHH
T ss_pred eeccchH
Confidence 9999874
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=98.85 E-value=4.5e-08 Score=110.41 Aligned_cols=97 Identities=18% Similarity=0.148 Sum_probs=74.8
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCc-eEEEecC------CCC--CCCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQ-VLVFQFD------HTN--PPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~-~~v~~l~------~e~--~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
.++||+|+|+.+++...|.+++..|... ..|+.++ ... ...+++++++++.+.+... ...+++|+|||
T Consensus 21 ~~~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d~~~~l~~l---~~~~~~lvGhS 97 (276)
T 1zoi_A 21 DAPVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWDGHDMDHYADDVAAVVAHL---GIQGAVHVGHS 97 (276)
T ss_dssp TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH---TCTTCEEEEET
T ss_pred CCCeEEEECCCCcchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCceEEEEEC
Confidence 3478999999999999999999999764 8888876 111 2358999999988887744 34579999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCC
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSAPDY 1257 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~ 1257 (1392)
|||.||.++|.+. .-..+ .|+++++.++.
T Consensus 98 ~Gg~ia~~~a~~~--~p~~v~~lvl~~~~~~~ 127 (276)
T 1zoi_A 98 TGGGEVVRYMARH--PEDKVAKAVLIAAVPPL 127 (276)
T ss_dssp HHHHHHHHHHHHC--TTSCCCCEEEESCCCSC
T ss_pred ccHHHHHHHHHHh--CHHheeeeEEecCCCcc
Confidence 9999999877542 12345 89999986543
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=98.85 E-value=3.3e-08 Score=112.47 Aligned_cols=212 Identities=14% Similarity=0.207 Sum_probs=120.6
Q ss_pred CCCceeEeecCCCcccc---ccHHHHhhcCCceEEEecC------CCCC---CCCHHHHHHHHHHHHhhhccCCCCcEEE
Q psy1119 1155 GNNNTIFMVPGIEGIAT---VLEPLAKNINAQVLVFQFD------HTNP---PDTIPEMADSLLPHFKKRLVHGTDEIKL 1222 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~---~y~~La~~L~~~~~v~~l~------~e~~---~~sieelA~~y~~~I~~~q~qp~gPy~L 1222 (1392)
|.++||+|+|+.++... .|..+...|.....|+.++ ...+ ..+++++|+++.+.+... .-.+++|
T Consensus 23 G~g~~vvllHG~~~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~l 99 (282)
T 1iup_A 23 GEGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHIIGIMDAL---EIEKAHI 99 (282)
T ss_dssp CCSSEEEEECCCCTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTTCCCCHHHHHHHHHHHHHHT---TCCSEEE
T ss_pred CCCCeEEEECCCCCCccHHHHHHHHHHhhccCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCceEE
Confidence 44679999999876554 5666667777778888876 1112 348999999998888743 3468999
Q ss_pred EeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCC--cc---ccCC-CCChHHHHHHHHhcC-CccccCCHHHHHHHH
Q psy1119 1223 VGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYV--LT---SLRK-LPDWNAKLNYFLDLM-PEDATHSRTYQRNLA 1294 (1392)
Q Consensus 1223 ~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~--~~---~l~~-~~~~~~~l~~~~~~~-~~~~~~~~~~l~~~~ 1294 (1392)
+||||||.||.++|.+-- +.+ .|+++++.+... .. .+.. .+.. +.+..++... ........+......
T Consensus 100 vGhS~GG~ia~~~A~~~P---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (282)
T 1iup_A 100 VGNAFGGGLAIATALRYS---ERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSI-ENMRNLLDIFAYDRSLVTDELARLRY 175 (282)
T ss_dssp EEETHHHHHHHHHHHHSG---GGEEEEEEESCCCSCCCCCHHHHHHHTCCSCH-HHHHHHHHHHCSSGGGCCHHHHHHHH
T ss_pred EEECHhHHHHHHHHHHCh---HHHHHHHeeCCccCCCCCCHHHHHHhcCCCcH-HHHHHHHHHhhcCcccCCHHHHHHHH
Confidence 999999999999998542 346 888988754211 00 0000 1111 1222222211 111111222222111
Q ss_pred HH-----HHHHHHhh---------cccc--CCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-Cccc
Q psy1119 1295 HA-----AYKRITSI---------LKYT--DPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHFT 1356 (1392)
Q Consensus 1295 ~~-----~~~~~~~~---------~~y~--~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~~ 1356 (1392)
.. ....+... ..+. ......+++|++++.+++|. ........+.+... ..+++.++| +|+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~~-~~~~~~i~~~gH~~ 254 (282)
T 1iup_A 176 EASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELID-RAQLHVFGRCGHWT 254 (282)
T ss_dssp HHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCT-TEEEEEESSCCSCH
T ss_pred hhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHhCC-CCeEEEECCCCCCc
Confidence 00 00001000 0010 01224688999999999987 43333334444443 468899985 9999
Q ss_pred cccChHHHHHHHhhhcccCC
Q psy1119 1357 VLDNIKSAQIIMHEDSTDFK 1376 (1392)
Q Consensus 1357 ml~~~~~~~i~~~l~~~L~~ 1376 (1392)
++++|.. ....+...|..
T Consensus 255 ~~e~p~~--~~~~i~~fl~~ 272 (282)
T 1iup_A 255 QIEQTDR--FNRLVVEFFNE 272 (282)
T ss_dssp HHHSHHH--HHHHHHHHHHT
T ss_pred cccCHHH--HHHHHHHHHhc
Confidence 9988753 33444455544
|
| >4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus} | Back alignment and structure |
|---|
Probab=98.83 E-value=3.8e-09 Score=99.40 Aligned_cols=68 Identities=24% Similarity=0.269 Sum_probs=63.1
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhccc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSFE 1090 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~~ 1090 (1392)
+.|.+.|+++|++ ++|+.+++||++|+|||+|++|.++|+++||+.+++.++ .++|+++|++++....
T Consensus 19 ~~l~~i~~~vL~~---~~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~la~~l~~~~ 87 (93)
T 4i4d_A 19 RDIAAIWAETLGR---DSVGPHEDFAALGGNSIHAIXITNRVEELVDAELSIRVLLETRTVAGMTDHVHATL 87 (93)
T ss_dssp HHHHHHHHHHHTC---SCCCTTCCTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCC---CCCCCCCCHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHHHHHHHHHc
Confidence 4688999999998 579999999999999999999999999999999999999 8999999999887653
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=98.83 E-value=3.3e-08 Score=108.07 Aligned_cols=189 Identities=14% Similarity=0.181 Sum_probs=117.2
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCceEEEecC-------CCCCCCCHHHHHHHHHHHH------hhhccCCCCcEEE
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD-------HTNPPDTIPEMADSLLPHF------KKRLVHGTDEIKL 1222 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~-------~e~~~~sieelA~~y~~~I------~~~q~qp~gPy~L 1222 (1392)
.+++|+|+|+.+|+...|. +...|.....++.++ ......+++++++.+.+.+ +.. + ++.|
T Consensus 15 ~~~~vv~~hG~~~~~~~~~-~~~~l~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~l 88 (245)
T 3e0x_A 15 SPNTLLFVHGSGCNLKIFG-ELEKYLEDYNCILLDLKGHGESKGQCPSTVYGYIDNVANFITNSEVTKHQ---K--NITL 88 (245)
T ss_dssp CSCEEEEECCTTCCGGGGT-TGGGGCTTSEEEEECCTTSTTCCSCCCSSHHHHHHHHHHHHHHCTTTTTC---S--CEEE
T ss_pred CCCEEEEEeCCcccHHHHH-HHHHHHhCCEEEEecCCCCCCCCCCCCcCHHHHHHHHHHHHHhhhhHhhc---C--ceEE
Confidence 3578999999999999999 888888778888876 2223458999999998888 522 2 8999
Q ss_pred EeechhHHHHHHHHHH-HHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCcc-------ccCCHHHHHHH
Q psy1119 1223 VGFSFGGMVALELAIK-LEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPED-------ATHSRTYQRNL 1293 (1392)
Q Consensus 1223 ~G~S~Gg~VA~EmA~~-Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~-------~~~~~~~l~~~ 1293 (1392)
+||||||.+|.++|.+ .. . + .++++++.+.... .....+..+....... .....+....+
T Consensus 89 ~G~S~Gg~~a~~~a~~~~p---~-v~~lvl~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (245)
T 3e0x_A 89 IGYSMGGAIVLGVALKKLP---N-VRKVVSLSGGARFDK-------LDKDFMEKIYHNQLDNNYLLECIGGIDNPLSEKY 157 (245)
T ss_dssp EEETHHHHHHHHHHTTTCT---T-EEEEEEESCCSBCTT-------SCHHHHHHHHTTCCCHHHHHHHHTCSCSHHHHHH
T ss_pred EEeChhHHHHHHHHHHhCc---c-ccEEEEecCCCcccc-------ccHHHHHHHHHHHHHhhcCcccccccchHHHHHH
Confidence 9999999999999875 32 2 6 7888877543210 0011111111100000 00000000000
Q ss_pred -------HHHHHHHHHhhccccCC-CCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEc-cCccccccChH
Q psy1119 1294 -------AHAAYKRITSILKYTDP-KHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVD-GNHFTVLDNIK 1362 (1392)
Q Consensus 1294 -------~~~~~~~~~~~~~y~~~-~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~-G~H~~ml~~~~ 1362 (1392)
...+...+.....+... ....+++|++++.+++|. ........|.+... ..+++.++ ++|+.+++++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~ 235 (245)
T 3e0x_A 158 FETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVE-NSELKIFETGKHFLLVVNAK 235 (245)
T ss_dssp HTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSS-SEEEEEESSCGGGHHHHTHH
T ss_pred HHHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHcC-CceEEEeCCCCcceEEecHH
Confidence 11122233333333322 234678999999999987 44444455655544 47899998 79999988765
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.83 E-value=3.6e-08 Score=114.52 Aligned_cols=203 Identities=19% Similarity=0.291 Sum_probs=119.6
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC------C---CCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------H---TNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~---e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
+.+++|+|+|+.+++...|..++..|+. .|+.++ . .....+++++++++.+.++.. ...|++|+||
T Consensus 79 ~~~~~vv~~hG~~~~~~~~~~~~~~lg~--~Vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---~~~~v~lvGh 153 (330)
T 3p2m_A 79 GSAPRVIFLHGGGQNAHTWDTVIVGLGE--PALAVDLPGHGHSAWREDGNYSPQLNSETLAPVLREL---APGAEFVVGM 153 (330)
T ss_dssp SSCCSEEEECCTTCCGGGGHHHHHHSCC--CEEEECCTTSTTSCCCSSCBCCHHHHHHHHHHHHHHS---STTCCEEEEE
T ss_pred CCCCeEEEECCCCCccchHHHHHHHcCC--eEEEEcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCcEEEEE
Confidence 3457899999999999999999999954 455544 1 112358999999998888743 3468999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCc----------------cccCCCCChHHHHHHHHhcCCccccCCHH
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVL----------------TSLRKLPDWNAKLNYFLDLMPEDATHSRT 1288 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~----------------~~l~~~~~~~~~l~~~~~~~~~~~~~~~~ 1288 (1392)
||||.+|+++|.+- ...+ .++++++.+.... ........+...+.......+.. ..+
T Consensus 154 S~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 227 (330)
T 3p2m_A 154 SLGGLTAIRLAAMA---PDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHR---DVK 227 (330)
T ss_dssp THHHHHHHHHHHHC---TTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBSCHHHHHHHHHHHCTTS---CHH
T ss_pred CHhHHHHHHHHHhC---hhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccccCHHHHHHHHHhcCCCC---CHH
Confidence 99999999999863 3345 8899987543110 00011122222222222111110 111
Q ss_pred HHHHHHHHHHHHHHh------------hccccC-----CCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeE-EEE
Q psy1119 1289 YQRNLAHAAYKRITS------------ILKYTD-----PKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVK-VHF 1349 (1392)
Q Consensus 1289 ~l~~~~~~~~~~~~~------------~~~y~~-----~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~-v~~ 1349 (1392)
.+. ..+...... ...+.. .....+++|++++.+++|. ...+....+.+...+ .+ ++.
T Consensus 228 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~~~~-~~~~~~ 303 (330)
T 3p2m_A 228 SLR---RGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRATH-FRGVHI 303 (330)
T ss_dssp HHH---HHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHCSS-EEEEEE
T ss_pred HHH---HHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeeEEE
Confidence 111 011100000 000000 0112578999999999987 444444556565544 56 899
Q ss_pred Ecc-CccccccChHHHHHHHhhhccc
Q psy1119 1350 VDG-NHFTVLDNIKSAQIIMHEDSTD 1374 (1392)
Q Consensus 1350 v~G-~H~~ml~~~~~~~i~~~l~~~L 1374 (1392)
++| +|+.+++++.. +...+.+.|
T Consensus 304 i~~~gH~~~~e~p~~--~~~~i~~fl 327 (330)
T 3p2m_A 304 VEKSGHSVQSDQPRA--LIEIVRGVL 327 (330)
T ss_dssp ETTCCSCHHHHCHHH--HHHHHHHHT
T ss_pred eCCCCCCcchhCHHH--HHHHHHHHH
Confidence 996 99999988753 333444444
|
| >1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A | Back alignment and structure |
|---|
Probab=98.82 E-value=4.5e-09 Score=98.45 Aligned_cols=67 Identities=16% Similarity=0.305 Sum_probs=61.9
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
+.+.+.|+++|++ ++|+++++||++|+|||+|++|.++|+++||+.+++.++ .++|+++|++++...
T Consensus 17 ~~l~~i~~~vL~~---~~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~~Ti~~la~~i~~~ 84 (91)
T 1dny_A 17 SKLAEIWERVLGV---SGIGILDNFFQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVATR 84 (91)
T ss_dssp HHHHHHHHHHHTC---SSCCSSCCTTSSCCSSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHHHHHHHC-
T ss_pred HHHHHHHHHHhCC---CCCCCCCCHHHcCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHh
Confidence 5689999999998 579999999999999999999999999999999999999 899999999988653
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=98.82 E-value=6.6e-08 Score=109.69 Aligned_cols=200 Identities=15% Similarity=0.232 Sum_probs=117.4
Q ss_pred CCce-eEeecCCC---ccccccHHHHhhcCCceEEEecC------CCCC---CCCHHHH----HHHHHHHHhhhccCCCC
Q psy1119 1156 NNNT-IFMVPGIE---GIATVLEPLAKNINAQVLVFQFD------HTNP---PDTIPEM----ADSLLPHFKKRLVHGTD 1218 (1392)
Q Consensus 1156 ~~~p-LF~vp~ag---G~~~~y~~La~~L~~~~~v~~l~------~e~~---~~sieel----A~~y~~~I~~~q~qp~g 1218 (1392)
.++| |+|+|+.+ ++...|.++++.|.....|+.++ ...+ ..+++++ ++.+.+.++.. ...
T Consensus 27 ~g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~ 103 (285)
T 1c4x_A 27 PQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHF---GIE 103 (285)
T ss_dssp TTSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCSSHHHHHHHHHHHHHHHHHHH---TCS
T ss_pred CCCCEEEEEeCCCCCCcchhhHHHHHHHHhhCcEEEEecCCCCCCCCCCCCcccchhhhhhhHHHHHHHHHHHh---CCC
Confidence 3467 99999998 66678888888887678888876 1112 3589999 98888777643 346
Q ss_pred cEEEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCcc------ccC---CCCChHHHHHHHHhcCCcc-ccC--
Q psy1119 1219 EIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLT------SLR---KLPDWNAKLNYFLDLMPED-ATH-- 1285 (1392)
Q Consensus 1219 Py~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~------~l~---~~~~~~~~l~~~~~~~~~~-~~~-- 1285 (1392)
+++|+||||||.||+++|.+.. +.+ .|+++++.+..... .+. ..+.. +.+..++...... ...
T Consensus 104 ~~~lvGhS~Gg~va~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 179 (285)
T 1c4x_A 104 KSHIVGNSMGGAVTLQLVVEAP---ERFDKVALMGSVGAPMNARPPELARLLAFYADPRL-TPYRELIHSFVYDPENFPG 179 (285)
T ss_dssp SEEEEEETHHHHHHHHHHHHCG---GGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCH-HHHHHHHHTTSSCSTTCTT
T ss_pred ccEEEEEChHHHHHHHHHHhCh---HHhheEEEeccCCCCCCccchhHHHHHHHhccccH-HHHHHHHHHhhcCcccccC
Confidence 8999999999999999997643 345 78888875321100 000 01121 1222222221111 111
Q ss_pred CHHHHHHHHHH-----HHHHH-Hhh---cccc-----C-CCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEE
Q psy1119 1286 SRTYQRNLAHA-----AYKRI-TSI---LKYT-----D-PKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHF 1349 (1392)
Q Consensus 1286 ~~~~l~~~~~~-----~~~~~-~~~---~~y~-----~-~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~ 1349 (1392)
..+........ ....+ .+. ..+. . .....+++|++++.+++|. ........+.+... ..+++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~~-~~~~~~ 258 (285)
T 1c4x_A 180 MEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLK-HAELVV 258 (285)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCS-SEEEEE
T ss_pred cHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeCCCeeeCHHHHHHHHHhCC-CceEEE
Confidence 12222211110 01111 111 1111 1 1124678999999999987 45444445555543 468899
Q ss_pred Ecc-CccccccChHH
Q psy1119 1350 VDG-NHFTVLDNIKS 1363 (1392)
Q Consensus 1350 v~G-~H~~ml~~~~~ 1363 (1392)
++| +|+.++++|..
T Consensus 259 i~~~gH~~~~e~p~~ 273 (285)
T 1c4x_A 259 LDRCGHWAQLERWDA 273 (285)
T ss_dssp ESSCCSCHHHHSHHH
T ss_pred eCCCCcchhhcCHHH
Confidence 985 99999988753
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=98.82 E-value=1.5e-08 Score=113.29 Aligned_cols=197 Identities=9% Similarity=0.119 Sum_probs=119.4
Q ss_pred ceeEeecCCCccccccHHHHhhcCCceEEEecC------CCC------CCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1158 NTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTN------PPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~------~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
++|+|+|+.+|+...|..+++.|.....++.++ ... ...+++++++.+.+.++.. +..|+.|+||
T Consensus 29 ~~vv~lHG~~~~~~~~~~~~~~l~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvG~ 105 (282)
T 3qvm_A 29 KTVLLAHGFGCDQNMWRFMLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVAL---DLVNVSIIGH 105 (282)
T ss_dssp CEEEEECCTTCCGGGGTTTHHHHHTTSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHHHHHT---TCCSEEEEEE
T ss_pred CeEEEECCCCCCcchHHHHHHHHhcCceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHHHHHc---CCCceEEEEe
Confidence 789999999999999999999998888888876 111 1238999999998888743 4578999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCcc--ccCCCCC---hHHHHHH-----------HHhcCCccccCCHH
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLT--SLRKLPD---WNAKLNY-----------FLDLMPEDATHSRT 1288 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~--~l~~~~~---~~~~l~~-----------~~~~~~~~~~~~~~ 1288 (1392)
||||.+|+++|.+..+ .+ .++++++.+..... ....... ....+.. +..... ......+
T Consensus 106 S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 181 (282)
T 3qvm_A 106 SVSSIIAGIASTHVGD---RISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVM-GASHSSE 181 (282)
T ss_dssp THHHHHHHHHHHHHGG---GEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHH-CTTSCHH
T ss_pred cccHHHHHHHHHhCch---hhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhcc-CCccchh
Confidence 9999999999987532 35 78888876543211 0000000 0111100 000000 0011222
Q ss_pred HHHHHHHHHH--------HHHHhhccccC-CCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-Ccccc
Q psy1119 1289 YQRNLAHAAY--------KRITSILKYTD-PKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHFTV 1357 (1392)
Q Consensus 1289 ~l~~~~~~~~--------~~~~~~~~y~~-~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~~m 1357 (1392)
....+...+. ........+.. ....++++|++++.++.|. ........+.+... ..+++.++| +|+.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~ 260 (282)
T 3qvm_A 182 LIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIP-NSQLELIQAEGHCLH 260 (282)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHSS-SEEEEEEEEESSCHH
T ss_pred hHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhCC-CCcEEEecCCCCccc
Confidence 2222221111 11111111111 1224688999999999987 44444445555443 468999985 99999
Q ss_pred ccChH
Q psy1119 1358 LDNIK 1362 (1392)
Q Consensus 1358 l~~~~ 1362 (1392)
++++.
T Consensus 261 ~~~~~ 265 (282)
T 3qvm_A 261 MTDAG 265 (282)
T ss_dssp HHCHH
T ss_pred ccCHH
Confidence 98865
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=98.82 E-value=1.9e-08 Score=114.26 Aligned_cols=96 Identities=13% Similarity=0.170 Sum_probs=76.2
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCC--C----CCHHHHHHHHHHHHhhhccCCC-CcEE
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNP--P----DTIPEMADSLLPHFKKRLVHGT-DEIK 1221 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~--~----~sieelA~~y~~~I~~~q~qp~-gPy~ 1221 (1392)
|.++||+|+|+.+|+...|.++++.|.....++.++ ...+ . .+++++++.+.+.++.. .. +|+.
T Consensus 27 g~~~~vv~lHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~~ 103 (302)
T 1mj5_A 27 GTGDPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEHRDYLDALWEAL---DLGDRVV 103 (302)
T ss_dssp SCSSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHHHHHHHHHHHHT---TCTTCEE
T ss_pred CCCCEEEEECCCCCchhhhHHHHHHhccCCeEEEEcCCCCCCCCCCCCCCcccccHHHHHHHHHHHHHHh---CCCceEE
Confidence 346899999999999999999999998777888875 1111 1 58999999998888743 33 7899
Q ss_pred EEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1222 LVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1222 L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
|+||||||.+|+++|.+.. ..+ .++++++.++
T Consensus 104 lvG~S~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~ 136 (302)
T 1mj5_A 104 LVVHDWGSALGFDWARRHR---ERVQGIAYMEAIAM 136 (302)
T ss_dssp EEEEHHHHHHHHHHHHHTG---GGEEEEEEEEECCS
T ss_pred EEEECCccHHHHHHHHHCH---HHHhheeeecccCC
Confidence 9999999999999998643 235 7888887653
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.81 E-value=3.6e-08 Score=113.71 Aligned_cols=147 Identities=18% Similarity=0.204 Sum_probs=103.1
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCccc--HHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKN--GYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~--~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
.++++||||+|+||.++++.|+++|.+ |+.++|+.... +.....++.+...| +.++.+|++|++++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~~~~~~~~~~~~~~~l~~~~--v~~v~~D~~d~~~l~~~~~---- 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHP-TFLLVRESTASSNSEKAQLLESFKASG--ANIVHGSIDDHASLVEAVK---- 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCCCCTTTTHHHHHHHHHHHTTT--CEEECCCTTCHHHHHHHHH----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCC-EEEEECCcccccCHHHHHHHHHHHhCC--CEEEEeccCCHHHHHHHHc----
Confidence 467999999999999999999999976 77788875432 22333344555556 4567899999999888775
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccC-----CCCChhHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRG-----NAGQTNYGM 933 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G-----~~gq~~Yaa 933 (1392)
.+|+|||+|+... +.++.++.+++... ....+|| +|+...... .++...| .
T Consensus 77 --~~d~vi~~a~~~~-------------------~~~~~~l~~aa~~~-g~v~~~v-~S~~g~~~~~~~~~~p~~~~y-~ 132 (308)
T 1qyc_A 77 --NVDVVISTVGSLQ-------------------IESQVNIIKAIKEV-GTVKRFF-PSEFGNDVDNVHAVEPAKSVF-E 132 (308)
T ss_dssp --TCSEEEECCCGGG-------------------SGGGHHHHHHHHHH-CCCSEEE-CSCCSSCTTSCCCCTTHHHHH-H
T ss_pred --CCCEEEECCcchh-------------------hhhHHHHHHHHHhc-CCCceEe-ecccccCccccccCCcchhHH-H
Confidence 4899999998632 33556676666543 1256777 454332211 2335678 9
Q ss_pred HHHHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 934 ANSIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 934 ana~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
+|..++.+.+ ..|++.+.+..|.+.
T Consensus 133 sK~~~e~~~~---~~~~~~~~~r~~~~~ 157 (308)
T 1qyc_A 133 VKAKVRRAIE---AEGIPYTYVSSNCFA 157 (308)
T ss_dssp HHHHHHHHHH---HHTCCBEEEECCEEH
T ss_pred HHHHHHHHHH---hcCCCeEEEEeceec
Confidence 9999988875 368998888776553
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=98.81 E-value=2.5e-09 Score=124.07 Aligned_cols=155 Identities=16% Similarity=0.096 Sum_probs=105.3
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
.+++|||||+|.||.++++.|+++|.+ |+.++|+..........+..+. ....+.++.+|++
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~---------------- 68 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEE-VTVLDDLRVPPMIPPEGTGKFL-EKPVLELEERDLS---------------- 68 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCC-EEEECCCSSCCSSCCTTSSEEE-CSCGGGCCHHHHT----------------
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCE-EEEEecCCcccccchhhhhhhc-cCCCeeEEeCccc----------------
Confidence 578999999999999999999999986 7888887541000000000000 0112333445554
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC-----------Ch
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG-----------QT 929 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g-----------q~ 929 (1392)
.+|.|||+|+........+. ....+. |+.|+.++.+++... ....||++||.+..-+..+ ..
T Consensus 69 ~~d~vi~~a~~~~~~~~~~~----~~~~~~-n~~~~~~ll~a~~~~--~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~ 141 (321)
T 3vps_A 69 DVRLVYHLASHKSVPRSFKQ----PLDYLD-NVDSGRHLLALCTSV--GVPKVVVGSTCEVYGQADTLPTPEDSPLSPRS 141 (321)
T ss_dssp TEEEEEECCCCCCHHHHTTS----TTTTHH-HHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred cCCEEEECCccCChHHHHhC----HHHHHH-HHHHHHHHHHHHHHc--CCCeEEEecCHHHhCCCCCCCCCCCCCCCCCC
Confidence 79999999997542211111 223445 899999999888665 3579999999875433222 57
Q ss_pred hHHHHHHHHHHHHHHHHHc-CC-CeEEEEcccc
Q psy1119 930 NYGMANSIMERICEARRAE-GL-PGLAVEWGAV 960 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~-Gl-p~~ai~~g~~ 960 (1392)
.|+.+|...+.+++....+ |+ +.+.+..+.+
T Consensus 142 ~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v 174 (321)
T 3vps_A 142 PYAASKVGLEMVAGAHQRASVAPEVGIVRFFNV 174 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEE
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCceEEEEeccc
Confidence 8999999999999887664 88 8888877755
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=6.8e-08 Score=109.00 Aligned_cols=96 Identities=18% Similarity=0.237 Sum_probs=75.4
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCc-eEEEecC------CC--CCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQ-VLVFQFD------HT--NPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~-~~v~~l~------~e--~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
.++||+|+|+.+++...|.++++.|... ..|+.++ .. ....+++++++++.+.+... ...|++|+|||
T Consensus 22 ~~~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l---~~~~~~lvGhS 98 (279)
T 1hkh_A 22 SGQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLETL---DLRDVVLVGFS 98 (279)
T ss_dssp SSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH---TCCSEEEEEET
T ss_pred CCCcEEEEcCCCchhhHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc---CCCceEEEEeC
Confidence 4578999999999999999999999764 8888876 11 12358999999988888743 34689999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
|||.+|.++|.+..+ ..+ .++++++.++
T Consensus 99 ~Gg~va~~~a~~~p~--~~v~~lvl~~~~~~ 127 (279)
T 1hkh_A 99 MGTGELARYVARYGH--ERVAKLAFLASLEP 127 (279)
T ss_dssp HHHHHHHHHHHHHCS--TTEEEEEEESCCCS
T ss_pred hhHHHHHHHHHHcCc--cceeeEEEEccCCc
Confidence 999999999876421 145 8889987554
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=98.30 E-value=5e-10 Score=127.11 Aligned_cols=96 Identities=18% Similarity=0.283 Sum_probs=74.4
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC------CC-------CCCCCHHHHHHHHHHHHhhhccCCCCcEE
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HT-------NPPDTIPEMADSLLPHFKKRLVHGTDEIK 1221 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e-------~~~~sieelA~~y~~~I~~~q~qp~gPy~ 1221 (1392)
|.++||+|+|+.+|+...|.++++.|.....++.++ .. ....+++++++.+.+.++.. ..+|++
T Consensus 23 g~~p~vv~lHG~~~~~~~~~~~~~~l~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~ 99 (304)
T 3b12_A 23 GSGPALLLLHGFPQNLHMWARVAPLLANEYTVVCADLRGYGGSSKPVGAPDHANYSFRAMASDQRELMRTL---GFERFH 99 (304)
Confidence 356899999999999999999999998667777765 11 22457888888888777643 346899
Q ss_pred EEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1222 LVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1222 L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
|+||||||.+|+++|.+..+ .+ .++++++.++
T Consensus 100 lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~ 132 (304)
T 3b12_A 100 LVGHARGGRTGHRMALDHPD---SVLSLAVLDIIPT 132 (304)
Confidence 99999999999999987643 35 7788877543
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=98.80 E-value=6.5e-08 Score=109.78 Aligned_cols=95 Identities=11% Similarity=0.163 Sum_probs=75.8
Q ss_pred CCCceeEeecCCCccccccHHHHhh-cCCceEEEecC--------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKN-INAQVLVFQFD--------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~-L~~~~~v~~l~--------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
|.++||+|+|+.+|+...|.+++.. +.....|+.++ ......+++++++.+.+.++.. +..|++|+||
T Consensus 27 g~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvGh 103 (309)
T 3u1t_A 27 GSGQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDIEYRLQDHVAYMDGFIDAL---GLDDMVLVIH 103 (309)
T ss_dssp ECSSEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHHH---TCCSEEEEEE
T ss_pred CCCCEEEEECCCcchhhhHHHHHHHHHhCCCEEEEEccCCCCCCCCCCcccCHHHHHHHHHHHHHHc---CCCceEEEEe
Confidence 4468999999999999999999999 67778888876 1112468999999998888743 3468999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
||||.+|.++|.+. ...+ .++++++..
T Consensus 104 S~Gg~~a~~~a~~~---p~~v~~lvl~~~~~ 131 (309)
T 3u1t_A 104 DWGSVIGMRHARLN---PDRVAAVAFMEALV 131 (309)
T ss_dssp EHHHHHHHHHHHHC---TTTEEEEEEEEESC
T ss_pred CcHHHHHHHHHHhC---hHhheEEEEeccCC
Confidence 99999999999864 2345 788888754
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=1.3e-08 Score=120.42 Aligned_cols=152 Identities=16% Similarity=0.092 Sum_probs=109.1
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhC-----CceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRG-----ARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~G-----Ar~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
++++||||+|.||.++++.|+++| .+ |+.++|+..... + .+.++.++.+|++|.+++.++++.
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~-V~~~~r~~~~~~--------~--~~~~~~~~~~Dl~d~~~~~~~~~~- 69 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWK-VYGVARRTRPAW--------H--EDNPINYVQCDISDPDDSQAKLSP- 69 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEE-EEEEESSCCCSC--------C--CSSCCEEEECCTTSHHHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceE-EEEEeCCCCccc--------c--ccCceEEEEeecCCHHHHHHHHhc-
Confidence 579999999999999999999999 65 888888754322 1 123467789999999988877653
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEE-------EecccccccCC----
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFV-------VFSSVSCGRGN---- 925 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV-------~~SS~s~~~G~---- 925 (1392)
..++|.|||+|+... +++...+++|+.|+.++.+++...++...+|| ++||.+. .|.
T Consensus 70 --~~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~v-yg~~~~~ 137 (364)
T 2v6g_A 70 --LTDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFES-YGKIESH 137 (364)
T ss_dssp --CTTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGG-TTTSCCC
T ss_pred --CCCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhh-ccccccC
Confidence 235999999999652 24667889999999999998876533566787 5777643 222
Q ss_pred -----------CCChhHHHHHHHHHHHHHHHH-HcC-CCeEEEEccccC
Q psy1119 926 -----------AGQTNYGMANSIMERICEARR-AEG-LPGLAVEWGAVG 961 (1392)
Q Consensus 926 -----------~gq~~Yaaana~ld~la~~r~-~~G-lp~~ai~~g~~~ 961 (1392)
+....|.++ +.+++... ..| ++.+.+..+.+-
T Consensus 138 ~~~~~E~~~~~~~~~~y~~~----E~~~~~~~~~~~~~~~~ilRp~~v~ 182 (364)
T 2v6g_A 138 DPPYTEDLPRLKYMNFYYDL----EDIMLEEVEKKEGLTWSVHRPGNIF 182 (364)
T ss_dssp CSSBCTTSCCCSSCCHHHHH----HHHHHHHHTTSTTCEEEEEEESSEE
T ss_pred CCCCCccccCCccchhhHHH----HHHHHHHhhcCCCceEEEECCCcee
Confidence 224568544 44443332 345 898888887653
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=98.80 E-value=3.9e-08 Score=111.19 Aligned_cols=95 Identities=9% Similarity=0.144 Sum_probs=75.7
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecC--------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechh
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD--------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFG 1228 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~--------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~G 1228 (1392)
++||+|+|+.+|+...|.++++.|.....++.++ ......+++++++++.+.++.. ...+++|+|||||
T Consensus 32 ~~~vl~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvG~S~G 108 (299)
T 3g9x_A 32 GTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDHVRYLDAFIEAL---GLEEVVLVIHDWG 108 (299)
T ss_dssp SCCEEEECCTTCCGGGGTTTHHHHTTTSCEEEECCTTSTTSCCCCCCCCHHHHHHHHHHHHHHT---TCCSEEEEEEHHH
T ss_pred CCEEEEECCCCccHHHHHHHHHHHccCCEEEeeCCCCCCCCCCCCCcccHHHHHHHHHHHHHHh---CCCcEEEEEeCcc
Confidence 5789999999999999999999998777777775 1122568999999988888743 3458999999999
Q ss_pred HHHHHHHHHHHHHcCCcc-EEEEEeCCCCC
Q psy1119 1229 GMVALELAIKLEQLGTKC-HLYLVDSAPDY 1257 (1392)
Q Consensus 1229 g~VA~EmA~~Le~~G~~v-~LvLiD~~p~~ 1257 (1392)
|.+|.++|.+.. ..+ .++++++.++.
T Consensus 109 g~~a~~~a~~~p---~~v~~lvl~~~~~~~ 135 (299)
T 3g9x_A 109 SALGFHWAKRNP---ERVKGIACMEFIRPF 135 (299)
T ss_dssp HHHHHHHHHHSG---GGEEEEEEEEECCCB
T ss_pred HHHHHHHHHhcc---hheeEEEEecCCcch
Confidence 999999998642 235 78888865543
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-07 Score=105.73 Aligned_cols=194 Identities=18% Similarity=0.234 Sum_probs=111.5
Q ss_pred ceeEeecCCCcc-ccccHHHHhhcCCc-eEEEecC------CCCC--CCC---HHHHHHHHHHHHhhhccCCCCcEEEEe
Q psy1119 1158 NTIFMVPGIEGI-ATVLEPLAKNINAQ-VLVFQFD------HTNP--PDT---IPEMADSLLPHFKKRLVHGTDEIKLVG 1224 (1392)
Q Consensus 1158 ~pLF~vp~agG~-~~~y~~La~~L~~~-~~v~~l~------~e~~--~~s---ieelA~~y~~~I~~~q~qp~gPy~L~G 1224 (1392)
+||+++|+.+|+ ...|.++++.|... ..|+.++ ...+ .-+ +++.++..++.++.. +..|+.|+|
T Consensus 24 ~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~l~G 100 (254)
T 2ocg_A 24 HAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKAL---KFKKVSLLG 100 (254)
T ss_dssp EEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSCCCCCTTHHHHHHHHHHHHHHHT---TCSSEEEEE
T ss_pred CeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHh---CCCCEEEEE
Confidence 589999999888 67899999999876 8888876 1111 124 788888888877643 346899999
Q ss_pred echhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCcc------ccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHH
Q psy1119 1225 FSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLT------SLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAA 1297 (1392)
Q Consensus 1225 ~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~------~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 1297 (1392)
|||||.+|.++|.+- .+.+ .|+++++.+..... .+.....|...+...+.. ....+........+
T Consensus 101 hS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 172 (254)
T 2ocg_A 101 WSDGGITALIAAAKY---PSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEA-----LYGYDYFARTCEKW 172 (254)
T ss_dssp ETHHHHHHHHHHHHC---TTTEEEEEEESCCSBCCHHHHHHHHTTSCGGGSCHHHHHHHHH-----HHCHHHHHHHHHHH
T ss_pred ECHhHHHHHHHHHHC---hHHhhheeEeccccccChhhHHHHHHHHHHHHHHHHhHHHHHH-----HhcchhhHHHHHHH
Confidence 999999999999753 3445 78888764321100 000000010111000000 00011111111111
Q ss_pred HHHHHhhcc----cc-CCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEc-cCccccccChHH
Q psy1119 1298 YKRITSILK----YT-DPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVD-GNHFTVLDNIKS 1363 (1392)
Q Consensus 1298 ~~~~~~~~~----y~-~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~-G~H~~ml~~~~~ 1363 (1392)
...+..... .. .....++++|++++.+++|. ........+.+... ..+++.++ ++|+.++++|..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~ 244 (254)
T 2ocg_A 173 VDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVK-GSRLHLMPEGKHNLHLRFADE 244 (254)
T ss_dssp HHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHST-TCEEEEETTCCTTHHHHTHHH
T ss_pred HHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCC-CCEEEEcCCCCCchhhhCHHH
Confidence 111111111 00 11234689999999999987 44333333444443 36788887 589998888753
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-08 Score=117.44 Aligned_cols=197 Identities=13% Similarity=0.180 Sum_probs=116.0
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCceEEEecC--CC-------CCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD--HT-------NPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~--~e-------~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
.++||+|+|+.+|+...|.++++.|.....|+.++ +. ....+++++++.+.+.++.. +..|+.|+|||
T Consensus 66 ~~~~vv~lHG~~~~~~~~~~~~~~L~~g~~vi~~D~~G~gG~s~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~lvG~S 142 (306)
T 2r11_A 66 DAPPLVLLHGALFSSTMWYPNIADWSSKYRTYAVDIIGDKNKSIPENVSGTRTDYANWLLDVFDNL---GIEKSHMIGLS 142 (306)
T ss_dssp TSCEEEEECCTTTCGGGGTTTHHHHHHHSEEEEECCTTSSSSCEECSCCCCHHHHHHHHHHHHHHT---TCSSEEEEEET
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc---CCCceeEEEEC
Confidence 45899999999999999999999987777788775 21 13468999999988887643 34689999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccc-------cCC-CCChHHHHHHHHhcCCccccCCHHHHHHHHHHH
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTS-------LRK-LPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAA 1297 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~-------l~~-~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 1297 (1392)
|||.+|+++|.+.. ..+ .++++++.+...... +.. ...+...+...+ .........+........
T Consensus 143 ~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 216 (306)
T 2r11_A 143 LGGLHTMNFLLRMP---ERVKSAAILSPAETFLPFHHDFYKYALGLTASNGVETFLNWM---MNDQNVLHPIFVKQFKAG 216 (306)
T ss_dssp HHHHHHHHHHHHCG---GGEEEEEEESCSSBTSCCCHHHHHHHHTTTSTTHHHHHHHHH---TTTCCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc---cceeeEEEEcCccccCcccHHHHHHHhHHHHHHHHHHHHHHh---hCCccccccccccccHHH
Confidence 99999999998643 235 788888754321000 000 001111111111 110011111111111111
Q ss_pred HHHHHhhcccc-----------CCCCCcccceEEEEeeCCCC-CCChhhcC-cccccCCCeEEEEEcc-CccccccChH
Q psy1119 1298 YKRITSILKYT-----------DPKHKAFGGNITLLRPTEQA-LPTAEDYG-LSKVCKKPVKVHFVDG-NHFTVLDNIK 1362 (1392)
Q Consensus 1298 ~~~~~~~~~y~-----------~~~~~~~~~pi~l~~a~~~~-~~~~~~~~-W~~~~~g~v~v~~v~G-~H~~ml~~~~ 1362 (1392)
.........|. .....++++|++++.+++|. ........ +++.. ...+++.++| +|+.+++++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~ 294 (306)
T 2r11_A 217 VMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFV-PDIEAEVIKNAGHVLSMEQPT 294 (306)
T ss_dssp HHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHHHHHHHHHHHS-TTCEEEEETTCCTTHHHHSHH
T ss_pred HHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHHHHHHHHHHHC-CCCEEEEeCCCCCCCcccCHH
Confidence 10001111121 00113578899999999987 44333332 33333 4578999995 9999988874
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=98.78 E-value=2.2e-08 Score=116.35 Aligned_cols=145 Identities=17% Similarity=0.100 Sum_probs=101.6
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCC-cc-cHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSG-VK-NGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~-~~-~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
.++++||||+|+||.++++.|+++|++ |++++|+. .. .......++.+...| +.++.+|++|.+++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~l~~~~~~~--v~~v~~D~~d~~~l~~a~~---- 76 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHP-TFIYARPLTPDSTPSSVQLREEFRSMG--VTIIEGEMEEHEKMVSVLK---- 76 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCC-EEEEECCCCTTCCHHHHHHHHHHHHTT--CEEEECCTTCHHHHHHHHT----
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCc-EEEEECCcccccChHHHHHHHHhhcCC--cEEEEecCCCHHHHHHHHc----
Confidence 357999999999999999999999986 77788875 21 122222333444455 4567899999998887765
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC-CCeEEEecccccc------cCCCCChhH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT-LGQFVVFSSVSCG------RGNAGQTNY 931 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~-l~~fV~~SS~s~~------~G~~gq~~Y 931 (1392)
.+|+|||+|+... +.++.++.+++... . ..+|| + |..+. ...++...|
T Consensus 77 --~~d~vi~~a~~~~-------------------~~~~~~l~~aa~~~--g~v~~~v-~-S~~g~~~~~~~~~~p~~~~y 131 (321)
T 3c1o_A 77 --QVDIVISALPFPM-------------------ISSQIHIINAIKAA--GNIKRFL-P-SDFGCEEDRIKPLPPFESVL 131 (321)
T ss_dssp --TCSEEEECCCGGG-------------------SGGGHHHHHHHHHH--CCCCEEE-C-SCCSSCGGGCCCCHHHHHHH
T ss_pred --CCCEEEECCCccc-------------------hhhHHHHHHHHHHh--CCccEEe-c-cccccCccccccCCCcchHH
Confidence 4899999998642 44566777766543 3 56787 3 33331 111235679
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 932 GMANSIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 932 aaana~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
.+|..++.+++ ..|++.+.+..|.+.
T Consensus 132 -~sK~~~e~~~~---~~~~~~~~lrp~~~~ 157 (321)
T 3c1o_A 132 -EKKRIIRRAIE---AAALPYTYVSANCFG 157 (321)
T ss_dssp -HHHHHHHHHHH---HHTCCBEEEECCEEH
T ss_pred -HHHHHHHHHHH---HcCCCeEEEEeceec
Confidence 99999998885 458998888776654
|
| >2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A | Back alignment and structure |
|---|
Probab=98.76 E-value=5.9e-09 Score=98.43 Aligned_cols=69 Identities=20% Similarity=0.269 Sum_probs=62.8
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVS 1088 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~ 1088 (1392)
..+.+.|+++|+..+.++|+.+++|+++|+|||++++|++||+++||++++..++ .++|+.+|++++..
T Consensus 23 ~~l~~~~~~~l~~~~~~~i~~~~~f~~lG~DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~ 92 (95)
T 2ju1_A 23 RLVRTSTATVLGHDDPKAVRATTPFKELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDA 92 (95)
T ss_dssp HHHHHHHHHHTTCCCGGGCCSSSCHHHHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCChhhCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHHHHHHHHH
Confidence 4578999999994356889999999999999999999999999999999999998 89999999988764
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=98.76 E-value=6.7e-08 Score=106.04 Aligned_cols=197 Identities=12% Similarity=0.084 Sum_probs=110.2
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCC-ceEEEecC----CCC-CC----C-CHHHHHHHHHHHHhhhccCCCCcEEEE
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD----HTN-PP----D-TIPEMADSLLPHFKKRLVHGTDEIKLV 1223 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~----~e~-~~----~-sieelA~~y~~~I~~~q~qp~gPy~L~ 1223 (1392)
+.+++|+++|+.+|+...|..+++.|.. .+.++.++ +.. .. . +++++++++.+.++....+ ..++.|+
T Consensus 20 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~l~ 98 (251)
T 3dkr_A 20 GTDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAK-YAKVFVF 98 (251)
T ss_dssp CSSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTT-CSEEEEE
T ss_pred CCCceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHHh-cCCeEEE
Confidence 4557899999999999999999999974 47888876 111 11 1 7777777766555533212 5689999
Q ss_pred eechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHHHHHHH
Q psy1119 1224 GFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRIT 1302 (1392)
Q Consensus 1224 G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 1302 (1392)
||||||.+|+.+|.+. ...+ .++++++......... ..+......+........ ....+.......+.....
T Consensus 99 G~S~Gg~~a~~~a~~~---p~~~~~~i~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 171 (251)
T 3dkr_A 99 GLSLGGIFAMKALETL---PGITAGGVFSSPILPGKHHLV---PGFLKYAEYMNRLAGKSD-ESTQILAYLPGQLAAIDQ 171 (251)
T ss_dssp ESHHHHHHHHHHHHHC---SSCCEEEESSCCCCTTCBCHH---HHHHHHHHHHHHHHTCCC-CHHHHHHHHHHHHHHHHH
T ss_pred EechHHHHHHHHHHhC---ccceeeEEEecchhhccchhh---HHHHHHHHHHHhhcccCc-chhhHHhhhHHHHHHHHH
Confidence 9999999999999862 2334 3444333221111100 001111111111111110 111111122222221111
Q ss_pred hhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCC--CeEEEEEcc-CccccccC
Q psy1119 1303 SILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKK--PVKVHFVDG-NHFTVLDN 1360 (1392)
Q Consensus 1303 ~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g--~v~v~~v~G-~H~~ml~~ 1360 (1392)
...... .....+++|++++.+..|. ........+.+...+ .++++.++| +|+.+++.
T Consensus 172 ~~~~~~-~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 232 (251)
T 3dkr_A 172 FATTVA-ADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVNS 232 (251)
T ss_dssp HHHHHH-HTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEEEETTCCSCTTTST
T ss_pred HHHHHh-ccccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEEEeCCCCccccccc
Confidence 111111 1123678999999999987 444444444444444 689999995 89887774
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=98.75 E-value=1.8e-08 Score=107.13 Aligned_cols=176 Identities=13% Similarity=0.103 Sum_probs=110.1
Q ss_pred ce-eEeecCCCcccc-ccHHHH-hhc-CCceEEEecC-CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHH
Q psy1119 1158 NT-IFMVPGIEGIAT-VLEPLA-KNI-NAQVLVFQFD-HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVA 1232 (1392)
Q Consensus 1158 ~p-LF~vp~agG~~~-~y~~La-~~L-~~~~~v~~l~-~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA 1232 (1392)
+| |+|+|+.+|+.. .|..+. ..| ...+.++.++ ......+++++++.+.+.++ . . ..|+.|+||||||.+|
T Consensus 4 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~-~-~--~~~~~l~G~S~Gg~~a 79 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPRLEDWLDTLSLYQH-T-L--HENTYLVAHSLGCPAI 79 (192)
T ss_dssp CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSCCHHHHHHHHHTTGG-G-C--CTTEEEEEETTHHHHH
T ss_pred CCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCCCCCCCCHHHHHHHHHHHHH-h-c--cCCEEEEEeCccHHHH
Confidence 45 999999999998 777765 457 4567777775 22223478888888877776 2 2 4689999999999999
Q ss_pred HHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHHHHHHHhhccccCCC
Q psy1119 1233 LELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDPK 1311 (1392)
Q Consensus 1233 ~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~y~~~~ 1311 (1392)
+++|.+..... .+ .++++++..+.. . .+.+ +...... ..+ + ..
T Consensus 80 ~~~a~~~~~~~-~v~~~v~~~~~~~~~-~------~~~~----~~~~~~~--~~~--------------------~--~~ 123 (192)
T 1uxo_A 80 LRFLEHLQLRA-ALGGIILVSGFAKSL-P------TLQM----LDEFTQG--SFD--------------------H--QK 123 (192)
T ss_dssp HHHHHTCCCSS-CEEEEEEETCCSSCC-T------TCGG----GGGGTCS--CCC--------------------H--HH
T ss_pred HHHHHHhcccC-CccEEEEeccCCCcc-c------cchh----hhhhhhc--CCC--------------------H--HH
Confidence 99987542211 45 777776643321 0 1100 0000000 000 0 00
Q ss_pred CCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-CccccccChH-HHHHHHhhhcccC
Q psy1119 1312 HKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHFTVLDNIK-SAQIIMHEDSTDF 1375 (1392)
Q Consensus 1312 ~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~~ml~~~~-~~~i~~~l~~~L~ 1375 (1392)
..++.+|++++.+++|. ........|.+.. ..+++.++| +|+.+.+.+. ...+...+.+.|.
T Consensus 124 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~l~ 188 (192)
T 1uxo_A 124 IIESAKHRAVIASKDDQIVPFSFSKDLAQQI--DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFS 188 (192)
T ss_dssp HHHHEEEEEEEEETTCSSSCHHHHHHHHHHT--TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHH
T ss_pred HHhhcCCEEEEecCCCCcCCHHHHHHHHHhc--CceEEEeCCCcCcccccccccHHHHHHHHHHHHH
Confidence 12456799999999987 5545555666655 568899996 9999888753 2234444554443
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=98.75 E-value=4.6e-08 Score=103.21 Aligned_cols=162 Identities=15% Similarity=0.171 Sum_probs=104.1
Q ss_pred CceeEeecCCCccccccHHHHhhcCCc-e---EEEecCC----CCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechh
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQ-V---LVFQFDH----TNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFG 1228 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~-~---~v~~l~~----e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~G 1228 (1392)
+++++|+|+.+|+...|.++++.|... . .++.++. .....+++++++.+.+.++.. +..++.|+|||||
T Consensus 3 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~---~~~~~~lvG~S~G 79 (181)
T 1isp_A 3 HNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPVLSRFVQKVLDET---GAKKVDIVAHSMG 79 (181)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHHHHHHHHHHHHHHHHHHH---CCSCEEEEEETHH
T ss_pred CCeEEEECCcCCCHhHHHHHHHHHHHcCCCCccEEEEecCCCCCchhhhHHHHHHHHHHHHHHc---CCCeEEEEEECcc
Confidence 478999999999999999999999753 2 3666551 112235677777766666533 4568999999999
Q ss_pred HHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHHHHHHHhhccc
Q psy1119 1229 GMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKY 1307 (1392)
Q Consensus 1229 g~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~y 1307 (1392)
|.+|+++|.+.... ..+ .++++++++..... ..++
T Consensus 80 g~~a~~~~~~~~~~-~~v~~~v~~~~~~~~~~~----------------~~~~--------------------------- 115 (181)
T 1isp_A 80 GANTLYYIKNLDGG-NKVANVVTLGGANRLTTG----------------KALP--------------------------- 115 (181)
T ss_dssp HHHHHHHHHHSSGG-GTEEEEEEESCCGGGTCS----------------BCCC---------------------------
T ss_pred HHHHHHHHHhcCCC-ceEEEEEEEcCccccccc----------------ccCC---------------------------
Confidence 99999999876222 234 77787765321100 0000
Q ss_pred cCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-CccccccChHHHHHHHhhhcccCC
Q psy1119 1308 TDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHFTVLDNIKSAQIIMHEDSTDFK 1376 (1392)
Q Consensus 1308 ~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~~ml~~~~~~~i~~~l~~~L~~ 1376 (1392)
......+.|++++.++.|. ..... .++ ...+.+.++| +|+.+++++. ....+...|.+
T Consensus 116 --~~~~~~~~p~l~i~G~~D~~v~~~~----~~~--~~~~~~~~~~~gH~~~~~~~~---~~~~i~~fl~~ 175 (181)
T 1isp_A 116 --GTDPNQKILYTSIYSSADMIVMNYL----SRL--DGARNVQIHGVGHIGLLYSSQ---VNSLIKEGLNG 175 (181)
T ss_dssp --CSCTTCCCEEEEEEETTCSSSCHHH----HCC--BTSEEEEESSCCTGGGGGCHH---HHHHHHHHHTT
T ss_pred --CCCCccCCcEEEEecCCCccccccc----ccC--CCCcceeeccCchHhhccCHH---HHHHHHHHHhc
Confidence 0001234689999999887 33222 111 2357788876 9999998864 44445555554
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=98.73 E-value=7.6e-08 Score=110.09 Aligned_cols=97 Identities=15% Similarity=0.282 Sum_probs=70.4
Q ss_pred CCCCceeEeecCCCccccccHHHHhhcCCc---eEEEecC--C-----CCCCCCHHHHHHHHHHHHhhhccCCCCcEEEE
Q psy1119 1154 VGNNNTIFMVPGIEGIATVLEPLAKNINAQ---VLVFQFD--H-----TNPPDTIPEMADSLLPHFKKRLVHGTDEIKLV 1223 (1392)
Q Consensus 1154 ~g~~~pLF~vp~agG~~~~y~~La~~L~~~---~~v~~l~--~-----e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~ 1223 (1392)
.+.++||+|+|+.+|+...|.++++.|... +.++.++ + .+...+++++++.+.+.+. . . ..|++|+
T Consensus 33 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~l~~~~~-~-~--~~~~~lv 108 (302)
T 1pja_A 33 RASYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREAVVPIMA-K-A--PQGVHLI 108 (302)
T ss_dssp --CCCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHHHHHHHHHHHHHHHHH-H-C--TTCEEEE
T ss_pred cCCCCeEEEECCCCCChhHHHHHHHHHHhcCCCcEEEEeccCCCccchhhHHHHHHHHHHHHHHHhh-c-C--CCcEEEE
Confidence 345689999999999999999999999764 7777775 1 1122356666666655554 2 2 4689999
Q ss_pred eechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1224 GFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1224 G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
||||||.+|.++|.+..+ ..+ .++++++++.
T Consensus 109 GhS~Gg~ia~~~a~~~p~--~~v~~lvl~~~~~~ 140 (302)
T 1pja_A 109 CYSQGGLVCRALLSVMDD--HNVDSFISLSSPQM 140 (302)
T ss_dssp EETHHHHHHHHHHHHCTT--CCEEEEEEESCCTT
T ss_pred EECHHHHHHHHHHHhcCc--cccCEEEEECCCcc
Confidence 999999999999986432 136 7888887543
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=98.73 E-value=3.3e-08 Score=111.96 Aligned_cols=199 Identities=12% Similarity=0.064 Sum_probs=114.0
Q ss_pred CCceeEeecCCCccccc-cHH-----HHhhcCCceEEEecC--C------CCC-C---CCHHHHHHHHHHHHhhhccCCC
Q psy1119 1156 NNNTIFMVPGIEGIATV-LEP-----LAKNINAQVLVFQFD--H------TNP-P---DTIPEMADSLLPHFKKRLVHGT 1217 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~-y~~-----La~~L~~~~~v~~l~--~------e~~-~---~sieelA~~y~~~I~~~q~qp~ 1217 (1392)
.+++|+|+|+.+|+... |.+ +++.|.....|+.++ + ..+ . .+++++++.+.+.++.. +.
T Consensus 34 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l---~~ 110 (286)
T 2qmq_A 34 KRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYL---NF 110 (286)
T ss_dssp TCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHTTSCEEEEECTTTSTTCCCCCTTCCCCCHHHHHHTHHHHHHHH---TC
T ss_pred CCCeEEEeCCCCCCchhhhhhhhhhchhHHHhcCCCEEEecCCCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh---CC
Confidence 35789999999999874 665 677787666677664 1 112 1 28999999998888744 34
Q ss_pred CcEEEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccc--c-----CCCCChHHHHHHHHh-cCCccc-cCCH
Q psy1119 1218 DEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTS--L-----RKLPDWNAKLNYFLD-LMPEDA-THSR 1287 (1392)
Q Consensus 1218 gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~--l-----~~~~~~~~~l~~~~~-~~~~~~-~~~~ 1287 (1392)
.|+.|+||||||.+|+++|.+.. ..+ .++++++.+...... . ...... ...+.. .+.... ..++
T Consensus 111 ~~~~lvG~S~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 184 (286)
T 2qmq_A 111 STIIGVGVGAGAYILSRYALNHP---DTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSI---PDMILGHLFSQEELSGNS 184 (286)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCG---GGEEEEEEESCCCCCCCHHHHHHHHHHHTTSCH---HHHHHHHHSCHHHHHTTC
T ss_pred CcEEEEEEChHHHHHHHHHHhCh---hheeeEEEECCCCcccchhhhhhhhhccccccc---hHHHHHHHhcCCCCCcch
Confidence 58999999999999999997532 245 788888765321000 0 000000 001110 111100 0011
Q ss_pred HHHHHHH------------HHHHHHHHhhccccC--CCCCcccceEEEEeeCCCCCCChhhcCcccccCCCeEEEEEcc-
Q psy1119 1288 TYQRNLA------------HAAYKRITSILKYTD--PKHKAFGGNITLLRPTEQALPTAEDYGLSKVCKKPVKVHFVDG- 1352 (1392)
Q Consensus 1288 ~~l~~~~------------~~~~~~~~~~~~y~~--~~~~~~~~pi~l~~a~~~~~~~~~~~~W~~~~~g~v~v~~v~G- 1352 (1392)
+..+.+. ..+...+.....+.. .....+++|++++.+++|.........+.+......+++.++|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (286)
T 2qmq_A 185 ELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADS 264 (286)
T ss_dssp HHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTHHHHHHHHHHSCGGGEEEEEETTC
T ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCccccHHHHHHHHhcCCCceEEEeCCC
Confidence 1111111 111222222222221 1224678999999999987222222334444333588999986
Q ss_pred CccccccChHH
Q psy1119 1353 NHFTVLDNIKS 1363 (1392)
Q Consensus 1353 ~H~~ml~~~~~ 1363 (1392)
+|+.+++++..
T Consensus 265 gH~~~~e~p~~ 275 (286)
T 2qmq_A 265 GGQPQLTQPGK 275 (286)
T ss_dssp TTCHHHHCHHH
T ss_pred CCcccccChHH
Confidence 99999988753
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.71 E-value=4.7e-07 Score=105.15 Aligned_cols=200 Identities=15% Similarity=0.156 Sum_probs=115.4
Q ss_pred CCceeEeecCCCccccccHHHHhhcCC-ceEEEecC------C---CCCCCCHHHHHHHHHHHHhhhc-cCCCCcEEEEe
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD------H---TNPPDTIPEMADSLLPHFKKRL-VHGTDEIKLVG 1224 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~------~---e~~~~sieelA~~y~~~I~~~q-~qp~gPy~L~G 1224 (1392)
.+++|+|+|+.+++...|..+++.|.. .+.|+.++ . .....+++++++++.+.|.... ..+..|+.|+|
T Consensus 59 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~v~l~G 138 (342)
T 3hju_A 59 PKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLG 138 (342)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHHHTTTEEEEEECCTTSTTSCSSTTCCSCTHHHHHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred CCcEEEEECCCCcccchHHHHHHHHHhCCCeEEEEcCCCCcCCCCcCCCcCcHHHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 346799999999999999999999976 58888876 1 1134578888887776665321 12456899999
Q ss_pred echhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhc----CC-----cc-ccCCHHHHHHH
Q psy1119 1225 FSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDL----MP-----ED-ATHSRTYQRNL 1293 (1392)
Q Consensus 1225 ~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~----~~-----~~-~~~~~~~l~~~ 1293 (1392)
|||||.+|+.+|.+.. ..+ .++++++....... ....+......+... .. .. .....+....+
T Consensus 139 ~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (342)
T 3hju_A 139 HSMGGAIAILTAAERP---GHFAGMVLISPLVLANPE---SATTFKVLAAKVLNLVLPNLSLGPIDSSVLSRNKTEVDIY 212 (342)
T ss_dssp ETHHHHHHHHHHHHST---TTCSEEEEESCCCSCCTT---TTSHHHHHHHHHHHHHCTTCBCCCCCGGGSCSCHHHHHHH
T ss_pred eChHHHHHHHHHHhCc---cccceEEEECcccccchh---hhhHHHHHHHHHHHHhccccccCcccccccccchHHHHHH
Confidence 9999999999998642 345 78888764322100 001111111111111 00 00 00011111110
Q ss_pred HH------------HHHHHHHhhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCC-CeEEEEEcc-Cccccc
Q psy1119 1294 AH------------AAYKRITSILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKK-PVKVHFVDG-NHFTVL 1358 (1392)
Q Consensus 1294 ~~------------~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g-~v~v~~v~G-~H~~ml 1358 (1392)
.. .....+.....+. ....++++|++++.+..|. ........+.+...+ ..+++.++| +|+.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 291 (342)
T 3hju_A 213 NSDPLICRAGLKVCFGIQLLNAVSRVE-RALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHK 291 (342)
T ss_dssp HTCTTCCCSCCBHHHHHHHHHHHHHHH-HHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEETTCCSCGGG
T ss_pred hcCcccccccccHHHHHHHHHHHHHHH-HHHHhCCcCEEEEEeCCCcccChHHHHHHHHHcCCCCceEEEECCCCchhhc
Confidence 00 0000000000110 1123678999999999987 444444455554443 588999997 899999
Q ss_pred cChH
Q psy1119 1359 DNIK 1362 (1392)
Q Consensus 1359 ~~~~ 1362 (1392)
+.+.
T Consensus 292 ~~~~ 295 (342)
T 3hju_A 292 ELPE 295 (342)
T ss_dssp SCHH
T ss_pred CChH
Confidence 9874
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.3e-07 Score=107.17 Aligned_cols=94 Identities=14% Similarity=0.255 Sum_probs=74.3
Q ss_pred CCceeEeec--CCCccccccHHHHhhcCCceEEEecC------C---CCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEe
Q psy1119 1156 NNNTIFMVP--GIEGIATVLEPLAKNINAQVLVFQFD------H---TNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVG 1224 (1392)
Q Consensus 1156 ~~~pLF~vp--~agG~~~~y~~La~~L~~~~~v~~l~------~---e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G 1224 (1392)
.+++|+|+| +..|+...|.++++.|.....++.++ . .....+++++++.+.+.+... ...|++|+|
T Consensus 40 ~~p~vv~lHG~G~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvG 116 (292)
T 3l80_A 40 GNPCFVFLSGAGFFSTADNFANIIDKLPDSIGILTIDAPNSGYSPVSNQANVGLRDWVNAILMIFEHF---KFQSYLLCV 116 (292)
T ss_dssp CSSEEEEECCSSSCCHHHHTHHHHTTSCTTSEEEEECCTTSTTSCCCCCTTCCHHHHHHHHHHHHHHS---CCSEEEEEE
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHHhhcCeEEEEcCCCCCCCCCCCcccccHHHHHHHHHHHHHHh---CCCCeEEEE
Confidence 347899999 55777889999999999888888876 1 122468999999999888743 345999999
Q ss_pred echhHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1225 FSFGGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1225 ~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
|||||.+|+++|.+. ...+ .++++++..
T Consensus 117 hS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~ 145 (292)
T 3l80_A 117 HSIGGFAALQIMNQS---SKACLGFIGLEPTT 145 (292)
T ss_dssp ETTHHHHHHHHHHHC---SSEEEEEEEESCCC
T ss_pred EchhHHHHHHHHHhC---chheeeEEEECCCC
Confidence 999999999998764 3346 888998643
|
| >2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A | Back alignment and structure |
|---|
Probab=98.70 E-value=2.3e-08 Score=92.75 Aligned_cols=68 Identities=18% Similarity=0.188 Sum_probs=62.7
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVS 1088 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~ 1088 (1392)
+.+.+.|+++|++. .++++.+.+|+++|+|||++++|+++|+++||+.++..++ .++|+++|++++..
T Consensus 17 ~~l~~~~~~~l~~~-~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~~~~i~~~~~~~~~ti~~la~~l~~ 85 (88)
T 2afd_A 17 SWLIDQFAQQLDVD-PDDIDMEESFDNYDLNSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKRLGE 85 (88)
T ss_dssp HHHHHHHHHHHTSC-GGGCCTTSCGGGTTCCSTHHHHHHHHHHHHTTSCCCGGGTTTCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCcC-HHHcCCCCCHHHcCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHH
Confidence 45789999999984 5889999999999999999999999999999999999999 89999999998764
|
| >2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.69 E-value=1.5e-08 Score=97.02 Aligned_cols=67 Identities=16% Similarity=0.193 Sum_probs=61.8
Q ss_pred chHHHHHHHHhC-CCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhC-CccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILG-LRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFE-VFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~-~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~-~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
..|+++|+++|+ + +.|+++++||++|+|||+|++|..+|+++|+ +.+++.+| .++|+++|++++...
T Consensus 28 ~~La~iW~~vL~~~---~~i~~~ddFF~lGG~SLla~rLv~~ir~~~g~v~l~l~~Lf~~pTl~~lA~~l~~~ 97 (110)
T 2cq8_A 28 EAVRSVWQRILPKV---LEVEDSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQLLVRK 97 (110)
T ss_dssp HHHHHHHHHHCSSC---SCCCTTCBHHHHHCCTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC---CCCCCCCCHHhcCChHHHHHHHHHHHHHHcCCCCcCHHHHHhCCCHHHHHHHHHHH
Confidence 468899999998 5 6799999999999999999999999999999 99999999 999999999988653
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.68 E-value=7.3e-08 Score=100.63 Aligned_cols=143 Identities=16% Similarity=0.212 Sum_probs=99.7
Q ss_pred CceeEeecCCCccccc--cHHHHhhcCC-ceEEEecC--------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1157 NNTIFMVPGIEGIATV--LEPLAKNINA-QVLVFQFD--------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~--y~~La~~L~~-~~~v~~l~--------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
+++++++|+.+|+... |..+++.|.. ...++.++ ......++++.++..++.++... +..++.|+||
T Consensus 4 ~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~ 81 (176)
T 2qjw_A 4 RGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVRGRLQRLLEIARAAT--EKGPVVLAGS 81 (176)
T ss_dssp SCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGCTTCCHHHHHHHHHHHHHHHH--TTSCEEEEEE
T ss_pred CcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC--CCCCEEEEEE
Confidence 4679999999998764 4489888865 47777765 12234678888888888887542 4578999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHHHHHHHhh
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSI 1304 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 1304 (1392)
||||.+|+.+|.+.. + .++++++..... . .+.
T Consensus 82 S~Gg~~a~~~a~~~~-----~~~~v~~~~~~~~~--~---~~~------------------------------------- 114 (176)
T 2qjw_A 82 SLGSYIAAQVSLQVP-----TRALFLMVPPTKMG--P---LPA------------------------------------- 114 (176)
T ss_dssp THHHHHHHHHHTTSC-----CSEEEEESCCSCBT--T---BCC-------------------------------------
T ss_pred CHHHHHHHHHHHhcC-----hhheEEECCcCCcc--c---cCc-------------------------------------
Confidence 999999999987532 5 667776543211 0 000
Q ss_pred ccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEccCcccc
Q psy1119 1305 LKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDGNHFTV 1357 (1392)
Q Consensus 1305 ~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G~H~~m 1357 (1392)
..++++|++++.++.|. ........|.+.. +.+++.++++|+..
T Consensus 115 -------~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~H~~~ 159 (176)
T 2qjw_A 115 -------LDAAAVPISIVHAWHDELIPAADVIAWAQAR--SARLLLVDDGHRLG 159 (176)
T ss_dssp -------CCCCSSCEEEEEETTCSSSCHHHHHHHHHHH--TCEEEEESSCTTCT
T ss_pred -------ccccCCCEEEEEcCCCCccCHHHHHHHHHhC--CceEEEeCCCcccc
Confidence 12678899999999987 4444444555444 45677779999973
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=98.67 E-value=5.9e-08 Score=115.24 Aligned_cols=130 Identities=18% Similarity=0.119 Sum_probs=102.2
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
+++||||+|.||.++++.|+++|.-.|+.++|+ +|.++++++++ .+
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------------------~d~~~l~~~~~------~~ 47 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------------------TKEEELESALL------KA 47 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------------------CCHHHHHHHHH------HC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------------------CCHHHHHHHhc------cC
Confidence 589999999999999999999998225555553 67788887776 38
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCC-eEEEecccccccCCCCChhHHHHHHHHHHH
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLG-QFVVFSSVSCGRGNAGQTNYGMANSIMERI 941 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~-~fV~~SS~s~~~G~~gq~~Yaaana~ld~l 941 (1392)
|.|||+|+..... ++...++.|+.++.+|.++++.. ... +||++||.+... ...|+.+|...+.+
T Consensus 48 d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~ 113 (369)
T 3st7_A 48 DFIVHLAGVNRPE--------HDKEFSLGNVSYLDHVLDILTRN--TKKPAILLSSSIQATQ----DNPYGESKLQGEQL 113 (369)
T ss_dssp SEEEECCCSBCTT--------CSTTCSSSCCBHHHHHHHHHTTC--SSCCEEEEEEEGGGGS----CSHHHHHHHHHHHH
T ss_pred CEEEECCcCCCCC--------CHHHHHHHHHHHHHHHHHHHHHh--CCCCeEEEeCchhhcC----CCCchHHHHHHHHH
Confidence 9999999976532 34456778999999999887653 233 899999987653 67999999999999
Q ss_pred HHHHHH-cCCCeEEEEcccc
Q psy1119 942 CEARRA-EGLPGLAVEWGAV 960 (1392)
Q Consensus 942 a~~r~~-~Glp~~ai~~g~~ 960 (1392)
++.... .|++.+.+..+.+
T Consensus 114 ~~~~~~~~g~~~~i~R~~~v 133 (369)
T 3st7_A 114 LREYAEEYGNTVYIYRWPNL 133 (369)
T ss_dssp HHHHHHHHCCCEEEEEECEE
T ss_pred HHHHHHHhCCCEEEEECCce
Confidence 887554 4999888877654
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.67 E-value=1.4e-07 Score=107.76 Aligned_cols=142 Identities=8% Similarity=0.039 Sum_probs=99.3
Q ss_pred eEEEEcCcchHHHHHHHHHHHh-CCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 783 SYIICGGLGGFGLELADWLVLR-GARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~-GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
+++||||+|+||.++++.|.++ |++ |+.++|+..... .+...+ +.++.+|++|++++.++++ .
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~-V~~~~R~~~~~~-------~~~~~~--v~~~~~D~~d~~~l~~~~~------~ 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDH-FHIGVRNVEKVP-------DDWRGK--VSVRQLDYFNQESMVEAFK------G 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTT-EEEEESSGGGSC-------GGGBTT--BEEEECCTTCHHHHHHHTT------T
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCc-EEEEECCHHHHH-------HhhhCC--CEEEEcCCCCHHHHHHHHh------C
Confidence 5899999999999999999998 887 888888854321 123334 5678899999998887664 6
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHHH
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERI 941 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~l 941 (1392)
+|.|||+|+..... ..++.++.++.+++... ..++||++||.......+.. +...+.+++
T Consensus 66 ~d~vi~~a~~~~~~--------------~~~~~~~~~l~~aa~~~--gv~~iv~~Ss~~~~~~~~~~--~~~~~~~~e-- 125 (289)
T 3e48_A 66 MDTVVFIPSIIHPS--------------FKRIPEVENLVYAAKQS--GVAHIIFIGYYADQHNNPFH--MSPYFGYAS-- 125 (289)
T ss_dssp CSEEEECCCCCCSH--------------HHHHHHHHHHHHHHHHT--TCCEEEEEEESCCSTTCCST--THHHHHHHH--
T ss_pred CCEEEEeCCCCccc--------------hhhHHHHHHHHHHHHHc--CCCEEEEEcccCCCCCCCCc--cchhHHHHH--
Confidence 89999999864321 23577888888877653 45799999997544333221 222222333
Q ss_pred HHHHHHcCCCeEEEEccccC
Q psy1119 942 CEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 942 a~~r~~~Glp~~ai~~g~~~ 961 (1392)
+..+..|++...+..|.+-
T Consensus 126 -~~~~~~g~~~~ilrp~~~~ 144 (289)
T 3e48_A 126 -RLLSTSGIDYTYVRMAMYM 144 (289)
T ss_dssp -HHHHHHCCEEEEEEECEES
T ss_pred -HHHHHcCCCEEEEeccccc
Confidence 3344679998888887653
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.66 E-value=2.2e-07 Score=98.99 Aligned_cols=162 Identities=16% Similarity=0.151 Sum_probs=101.2
Q ss_pred CceeEeecCCCccc---cccHH-HHhhcCC--ceEEEecC-CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhH
Q psy1119 1157 NNTIFMVPGIEGIA---TVLEP-LAKNINA--QVLVFQFD-HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGG 1229 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~---~~y~~-La~~L~~--~~~v~~l~-~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg 1229 (1392)
+++|+|+|+.+|+. ..|.. +++.|.. .+.++.++ ......++.+.++.+++.+. ...|+.|+||||||
T Consensus 4 ~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~~~~~~~~~~~~~~l~-----~~~~~~lvG~S~Gg 78 (194)
T 2qs9_A 4 PSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPITARESIWLPFMETELH-----CDEKTIIIGHSSGA 78 (194)
T ss_dssp CCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTTCCHHHHHHHHHHTSC-----CCTTEEEEEETHHH
T ss_pred CCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCcccHHHHHHHHHHHhC-----cCCCEEEEEcCcHH
Confidence 37899999999994 55665 8888876 67888876 22223344444444433321 23689999999999
Q ss_pred HHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHHHHHHHhhcccc
Q psy1119 1230 MVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYT 1308 (1392)
Q Consensus 1230 ~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~y~ 1308 (1392)
.+|+++|.+.. + .++++++.++.. ....+. ........ ...+ .+
T Consensus 79 ~ia~~~a~~~p-----v~~lvl~~~~~~~~-------~~~~~~---~~~~~~~~--~~~~-----------~~------- 123 (194)
T 2qs9_A 79 IAAMRYAETHR-----VYAIVLVSAYTSDL-------GDENER---ASGYFTRP--WQWE-----------KI------- 123 (194)
T ss_dssp HHHHHHHHHSC-----CSEEEEESCCSSCT-------TCHHHH---HTSTTSSC--CCHH-----------HH-------
T ss_pred HHHHHHHHhCC-----CCEEEEEcCCcccc-------chhhhH---HHhhhccc--ccHH-----------HH-------
Confidence 99999997632 5 788887754321 111111 11111100 0000 00
Q ss_pred CCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-CccccccChHHH
Q psy1119 1309 DPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHFTVLDNIKSA 1364 (1392)
Q Consensus 1309 ~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~~ml~~~~~~ 1364 (1392)
.....|++++.+++|. ........|.+.. ..+++.++| +|+.+++.+...
T Consensus 124 ----~~~~~p~lii~G~~D~~vp~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~ 175 (194)
T 2qs9_A 124 ----KANCPYIVQFGSTDDPFLPWKEQQEVADRL--ETKLHKFTDCGHFQNTEFHELI 175 (194)
T ss_dssp ----HHHCSEEEEEEETTCSSSCHHHHHHHHHHH--TCEEEEESSCTTSCSSCCHHHH
T ss_pred ----HhhCCCEEEEEeCCCCcCCHHHHHHHHHhc--CCeEEEeCCCCCccchhCHHHH
Confidence 1234689999999987 5545555566655 468899997 999999888644
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=6.6e-08 Score=112.24 Aligned_cols=233 Identities=12% Similarity=0.109 Sum_probs=137.3
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
++++||||+|+||.++++.|+++|.+ |+.++|+..... ..++.+...| +.++.+|++|++++.++++ .
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~~~~~---~~~~~l~~~~--v~~v~~Dl~d~~~l~~a~~------~ 79 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHP-TYVFTRPNSSKT---TLLDEFQSLG--AIIVKGELDEHEKLVELMK------K 79 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCC-EEEEECTTCSCH---HHHHHHHHTT--CEEEECCTTCHHHHHHHHT------T
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCc-EEEEECCCCchh---hHHHHhhcCC--CEEEEecCCCHHHHHHHHc------C
Confidence 57999999999999999999999986 777888754221 1223344456 4567899999999887765 4
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccC-----CCCChhHHHHHH
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRG-----NAGQTNYGMANS 936 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G-----~~gq~~Yaaana 936 (1392)
+|.|||+|+... +.++.++.+++... ....+|| +|+...... .++...| .+|.
T Consensus 80 ~d~vi~~a~~~~-------------------~~~~~~l~~aa~~~-g~v~~~v-~S~~g~~~~~~~~~~p~~~~y-~sK~ 137 (318)
T 2r6j_A 80 VDVVISALAFPQ-------------------ILDQFKILEAIKVA-GNIKRFL-PSDFGVEEDRINALPPFEALI-ERKR 137 (318)
T ss_dssp CSEEEECCCGGG-------------------STTHHHHHHHHHHH-CCCCEEE-CSCCSSCTTTCCCCHHHHHHH-HHHH
T ss_pred CCEEEECCchhh-------------------hHHHHHHHHHHHhc-CCCCEEE-eeccccCcccccCCCCcchhH-HHHH
Confidence 899999998532 34566776666543 1156777 354321111 1224568 9999
Q ss_pred HHHHHHHHHHHcCCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccCCCeEEehhhhhhhcCC
Q psy1119 937 IMERICEARRAEGLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEKKAGS 1016 (1392)
Q Consensus 937 ~ld~la~~r~~~Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~ 1016 (1392)
.++.+.+ ..|++.+.+..|.+.+..+ . .. .. ..+ ...+. ....-......-
T Consensus 138 ~~e~~~~---~~~~~~~~lr~~~~~~~~~-~-------~~-~~---------------~~~-~~~~~-~~~~~~~~~~~~ 188 (318)
T 2r6j_A 138 MIRRAIE---EANIPYTYVSANCFASYFI-N-------YL-LR---------------PYD-PKDEI-TVYGTGEAKFAM 188 (318)
T ss_dssp HHHHHHH---HTTCCBEEEECCEEHHHHH-H-------HH-HC---------------TTC-CCSEE-EEETTSCCEEEE
T ss_pred HHHHHHH---hcCCCeEEEEcceehhhhh-h-------hh-cc---------------ccC-CCCce-EEecCCCceeeE
Confidence 9988875 4789988887765532100 0 00 00 000 00000 000000000000
Q ss_pred CCcchHHHHHHHHhCCCCCcccCcCcchhhcC-cchhhHHHHHHHHHHHhCCccChhhhccCCHHHHHH
Q psy1119 1017 GGATNIVDAVINILGLRDLKTVSLHSTLAELG-MDSMMAVEIKQTLEREFEVFLTPQDIRGLTFAKLQD 1084 (1392)
Q Consensus 1017 ~~~~~l~~~~a~~l~~~~~~~i~~~~~l~~lG-~DSL~avel~~~l~~~~~~~l~~~~i~~~ti~~La~ 1084 (1392)
...+.+++.++.++.- + +. ....+.-.| .+.+.--|+...+.+.+|..++.. ..+..++.+
T Consensus 189 i~~~Dva~~~~~~l~~-~-~~--~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~---~~~~~~~~~ 250 (318)
T 2r6j_A 189 NYEQDIGLYTIKVATD-P-RA--LNRVVIYRPSTNIITQLELISRWEKKIGKKFKKI---HVPEEEIVA 250 (318)
T ss_dssp ECHHHHHHHHHHHTTC-G-GG--TTEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEE---EECHHHHHH
T ss_pred eeHHHHHHHHHHHhcC-c-cc--cCeEEEecCCCCccCHHHHHHHHHHHhCCCCcee---ecCHHHHHH
Confidence 0124577777777642 1 11 123344344 478888999999999999876543 334444443
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.1e-07 Score=101.76 Aligned_cols=152 Identities=16% Similarity=0.177 Sum_probs=107.9
Q ss_pred CCCceeEeecCCCccccccHH--HHhhcCCc-eEEEecC------C---CCC--CC-CHHHHHHHHHHHHhhhccCCCCc
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEP--LAKNINAQ-VLVFQFD------H---TNP--PD-TIPEMADSLLPHFKKRLVHGTDE 1219 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~--La~~L~~~-~~v~~l~------~---e~~--~~-sieelA~~y~~~I~~~q~qp~gP 1219 (1392)
+.+++++|+|+.+|+...|.. +++.|... ..++.++ . ..+ .. +++++++.+...++.. +..+
T Consensus 25 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 101 (207)
T 3bdi_A 25 SNRRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYGIDRGDLKHAAEFIRDYLKAN---GVAR 101 (207)
T ss_dssp TCCEEEEEECCTTCCGGGGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTTTCCTTCCHHHHHHHHHHHHHHT---TCSS
T ss_pred CCCCeEEEECCCCCCccccchHHHHHHHHhCCCeEEEEcCCcccccCcccCCCCCcchHHHHHHHHHHHHHHc---CCCc
Confidence 355789999999999999999 99999765 7777765 1 111 12 8899998888877643 3468
Q ss_pred EEEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHHH
Q psy1119 1220 IKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAY 1298 (1392)
Q Consensus 1220 y~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 1298 (1392)
+.|+|||+||.+|+.+|.+.. ..+ .++++++.... . + .
T Consensus 102 i~l~G~S~Gg~~a~~~a~~~~---~~~~~~v~~~~~~~~---~------~-----------------------------~ 140 (207)
T 3bdi_A 102 SVIMGASMGGGMVIMTTLQYP---DIVDGIIAVAPAWVE---S------L-----------------------------K 140 (207)
T ss_dssp EEEEEETHHHHHHHHHHHHCG---GGEEEEEEESCCSCG---G------G-----------------------------H
T ss_pred eEEEEECccHHHHHHHHHhCc---hhheEEEEeCCcccc---c------h-----------------------------h
Confidence 999999999999999987642 235 66777654211 0 0 0
Q ss_pred HHHHhhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-CccccccChH
Q psy1119 1299 KRITSILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHFTVLDNIK 1362 (1392)
Q Consensus 1299 ~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~~ml~~~~ 1362 (1392)
.. ..+++.|++++.+++|. ........|.+.. ...+++.++| +|+.+.+.+.
T Consensus 141 ~~-----------~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~~~~~ 194 (207)
T 3bdi_A 141 GD-----------MKKIRQKTLLVWGSKDHVVPIALSKEYASII-SGSRLEIVEGSGHPVYIEKPE 194 (207)
T ss_dssp HH-----------HTTCCSCEEEEEETTCTTTTHHHHHHHHHHS-TTCEEEEETTCCSCHHHHSHH
T ss_pred HH-----------HhhccCCEEEEEECCCCccchHHHHHHHHhc-CCceEEEeCCCCCCccccCHH
Confidence 00 01466899999999887 4444444555544 4578999997 9998887754
|
| >2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=98.66 E-value=2.8e-08 Score=92.55 Aligned_cols=68 Identities=21% Similarity=0.352 Sum_probs=62.9
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccCh--hhh-ccCCHHHHHHHHhc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTP--QDI-RGLTFAKLQDIAVS 1088 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~--~~i-~~~ti~~La~~~~~ 1088 (1392)
..+.+.|+++|++. .++++.+.+|+++|+|||++++|+++|+++||+.++. .++ .++|+.+|++++..
T Consensus 14 ~~l~~~~~~~l~~~-~~~i~~~~~~~~lG~DSL~~~~l~~~l~~~~g~~l~~~~~~l~~~~Tv~~la~~l~~ 84 (89)
T 2kr5_A 14 DAVMRVVSEESGIA-LEELTDDSNFADMGIDSLSSMVIGSRFREDLGLDLGPEFSLFIDCTTVRALKDFMLG 84 (89)
T ss_dssp HHHHHHHHHHHCCC-GGGCCTTCBHHHHTCCHHHHHHHHHHHHHTTCCCCCSSCCTTTSCCBHHHHHHHHHT
T ss_pred HHHHHHHHHHHCcC-HHHCCCCCCHHHcCccHHHHHHHHHHHHHHHCCCCCchHHHHHcCCCHHHHHHHHHH
Confidence 46889999999984 6889999999999999999999999999999999999 888 89999999998875
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=4.4e-07 Score=107.98 Aligned_cols=96 Identities=17% Similarity=0.116 Sum_probs=72.8
Q ss_pred CceeEeecCCCccccccHHHHhhcCC-----ce---EEEecC----------CC---CCCCCHHHHHHHHHHHHhhhcc-
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINA-----QV---LVFQFD----------HT---NPPDTIPEMADSLLPHFKKRLV- 1214 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~-----~~---~v~~l~----------~e---~~~~sieelA~~y~~~I~~~q~- 1214 (1392)
+++|+|+|+.+|+...|.+++..|.. .+ .|+.++ .. ....+++++++++.+.+... .
T Consensus 52 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~-~~ 130 (398)
T 2y6u_A 52 RLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCE-LG 130 (398)
T ss_dssp EEEEEEECCTTCCGGGGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHHHHTTTTBCSCCCHHHHHHHHHHHHHHH-TC
T ss_pred CCeEEEEcCCCCcHHHHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCCCCCccccCCCCCcchHHHHHHHHHHHh-cc
Confidence 36899999999999999999999982 24 677765 01 12568999999998888743 2
Q ss_pred ---CCCCcEEEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1215 ---HGTDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1215 ---qp~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
....|+.|+||||||.+|+++|.+. ...+ .++++++...
T Consensus 131 ~~~~~~~~~~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~ 173 (398)
T 2y6u_A 131 SIDSHPALNVVIGHSMGGFQALACDVLQ---PNLFHLLILIEPVVI 173 (398)
T ss_dssp SSTTCSEEEEEEEETHHHHHHHHHHHHC---TTSCSEEEEESCCCS
T ss_pred cccccCCceEEEEEChhHHHHHHHHHhC---chheeEEEEeccccc
Confidence 1233599999999999999998763 2345 8888887543
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=98.65 E-value=1.2e-08 Score=114.39 Aligned_cols=194 Identities=15% Similarity=0.110 Sum_probs=115.0
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCC-ceEEEecCC----C----CCCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFDH----T----NPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~~----e----~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
+.+++|+|+|+.+|+...|..+++.|.. .+.++.++. . ....+++++++++.+.++....+ ..++.|+||
T Consensus 38 g~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~i~l~G~ 116 (270)
T 3rm3_A 38 NGPVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVASVEEGYGWLKQR-CQTIFVTGL 116 (270)
T ss_dssp CSSEEEEEECCTTCCGGGTHHHHHHHHHTTCEEEECCCTTCSSCHHHHHTCCHHHHHHHHHHHHHHHHTT-CSEEEEEEE
T ss_pred CCCeEEEEECCCCCChhHHHHHHHHHHHCCCEEEEeCCCCCCCCccccccCCHHHHHHHHHHHHHHHHhh-CCcEEEEEE
Confidence 4568999999999999999999999976 477888761 1 12458899988888777643211 568999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCc--cccCCCCChHHHHHHHHhcCCcc----c---cCCHHHHHHHHH
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVL--TSLRKLPDWNAKLNYFLDLMPED----A---THSRTYQRNLAH 1295 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~--~~l~~~~~~~~~l~~~~~~~~~~----~---~~~~~~l~~~~~ 1295 (1392)
|+||.+|+.+|.+.. . + .++++++...... ........+...+..+....... . .........+..
T Consensus 117 S~Gg~~a~~~a~~~p---~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (270)
T 3rm3_A 117 SMGGTLTLYLAEHHP---D-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASLLQLAR 192 (270)
T ss_dssp THHHHHHHHHHHHCT---T-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCCCCCSEEEHHHHHHHHH
T ss_pred cHhHHHHHHHHHhCC---C-ccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHhhcccccChhHHHHHHH
Confidence 999999999998742 2 5 7788876432210 00000000000000000000000 0 001222222222
Q ss_pred HHHHHHHhhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccC-CCeEEEEEc-cCccccccCh
Q psy1119 1296 AAYKRITSILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCK-KPVKVHFVD-GNHFTVLDNI 1361 (1392)
Q Consensus 1296 ~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~-g~v~v~~v~-G~H~~ml~~~ 1361 (1392)
.... ... ...++++|++++.++.|. ........+.+... ..++++.++ ++|+.+++.+
T Consensus 193 ~~~~----~~~----~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 253 (270)
T 3rm3_A 193 LMAQ----TKA----KLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYD 253 (270)
T ss_dssp HHHH----HHH----TGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCCSSEEEEEESSCCSCGGGSTT
T ss_pred HHHH----HHh----hhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCCCcceEEEeCCCCcccccCcc
Confidence 2211 111 123578999999999987 45444444444443 356899998 6899988875
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=98.64 E-value=1.2e-07 Score=105.47 Aligned_cols=189 Identities=10% Similarity=0.109 Sum_probs=104.4
Q ss_pred CceeEeecCCCccccccHHHHhhcCC-ceEEEecC----CCC----CCCCHHHHHHHH---HHHHhhhccCCCCcEEEEe
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD----HTN----PPDTIPEMADSL---LPHFKKRLVHGTDEIKLVG 1224 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~----~e~----~~~sieelA~~y---~~~I~~~q~qp~gPy~L~G 1224 (1392)
++||+++|+.+|+...|..+++.|.. ...|+.++ +.. ...++++++++. ++.++.. +-.+++|+|
T Consensus 16 ~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~~~~~~~~~~~d~~~~~~~l~~~---~~~~~~lvG 92 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNK---GYEKIAVAG 92 (247)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHH---TCCCEEEEE
T ss_pred CcEEEEECCCCCChHHHHHHHHHHHHCCCEEEecccCCCCCCHHHhcCCCHHHHHHHHHHHHHHHHHc---CCCeEEEEE
Confidence 57899999999999999999999964 58888876 111 124677766544 3344422 345799999
Q ss_pred echhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCcc-ccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHHH----
Q psy1119 1225 FSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLT-SLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAY---- 1298 (1392)
Q Consensus 1225 ~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~---- 1298 (1392)
|||||.||.++|.+- ++ .|++++++...... ... .........+.... ..+.+........+.
T Consensus 93 ~SmGG~ia~~~a~~~-----pv~~lvl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 161 (247)
T 1tqh_A 93 LSLGGVFSLKLGYTV-----PIEGIVTMCAPMYIKSEETMY--EGVLEYAREYKKRE----GKSEEQIEQEMEKFKQTPM 161 (247)
T ss_dssp ETHHHHHHHHHHTTS-----CCSCEEEESCCSSCCCHHHHH--HHHHHHHHHHHHHH----TCCHHHHHHHHHHHTTSCC
T ss_pred eCHHHHHHHHHHHhC-----CCCeEEEEcceeecCcchhhh--HHHHHHHHHhhccc----ccchHHHHhhhhcccCCCH
Confidence 999999999998642 25 77776553221100 000 00000001110000 001111111000000
Q ss_pred ---HHHH-hhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCC-CeEEEEEcc-CccccccC
Q psy1119 1299 ---KRIT-SILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKK-PVKVHFVDG-NHFTVLDN 1360 (1392)
Q Consensus 1299 ---~~~~-~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g-~v~v~~v~G-~H~~ml~~ 1360 (1392)
..+. ...... .....+++|++++.+++|. ........+.+...+ ..+++.++| +|+.+++.
T Consensus 162 ~~~~~~~~~~~~~~-~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 229 (247)
T 1tqh_A 162 KTLKALQELIADVR-DHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQ 229 (247)
T ss_dssp TTHHHHHHHHHHHH-HTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGST
T ss_pred HHHHHHHHHHHHHH-hhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCCCceEEEEeCCCceeeccCc
Confidence 0000 000000 1123688999999999997 444444445454443 478899984 89988875
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=5.7e-07 Score=104.17 Aligned_cols=93 Identities=13% Similarity=0.173 Sum_probs=73.4
Q ss_pred CCceeEeecCCCccccccHHHHhhcCC-ceEEEecC------CCCC------CCCHHHHHHHHHHHHhhhccCC--CCcE
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD------HTNP------PDTIPEMADSLLPHFKKRLVHG--TDEI 1220 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~------~e~~------~~sieelA~~y~~~I~~~q~qp--~gPy 1220 (1392)
.++||+++|+.+++...|.+++..|.. ...|+.++ ...+ .-+++++|+++.+.+... . ..++
T Consensus 30 ~g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~~ 106 (328)
T 2cjp_A 30 EGPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHLVGDVVALLEAI---APNEEKV 106 (328)
T ss_dssp SSSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCGGGGSHHHHHHHHHHHHHHH---CTTCSSE
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCcccccHHHHHHHHHHHHHHh---cCCCCCe
Confidence 457999999999999999999999864 58888876 1112 237999999988887643 3 4689
Q ss_pred EEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1221 KLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1221 ~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
+|+||||||.||.++|.+-. +.+ .|++++++
T Consensus 107 ~lvGhS~Gg~ia~~~A~~~p---~~v~~lvl~~~~ 138 (328)
T 2cjp_A 107 FVVAHDWGALIAWHLCLFRP---DKVKALVNLSVH 138 (328)
T ss_dssp EEEEETHHHHHHHHHHHHCG---GGEEEEEEESCC
T ss_pred EEEEECHHHHHHHHHHHhCh---hheeEEEEEccC
Confidence 99999999999999998642 345 78888864
|
| >2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=3.6e-08 Score=93.63 Aligned_cols=69 Identities=16% Similarity=0.273 Sum_probs=63.0
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
+.+.+.|+++|++. .++++.+.+|++||+|||++++|++||+++||+.++..++ .++|+.+|++++...
T Consensus 24 ~~l~~~~~~~l~~~-~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~ 93 (99)
T 2liu_A 24 QVLKQQLAEALYTE-ESEIAEDQKFVDLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLELSGYIAQI 93 (99)
T ss_dssp HHHHHHHHHHTTSC-GGGCCSSSCHHHHTCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCcC-HHHcCCCCCHHHhCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHH
Confidence 45788999999984 5889999999999999999999999999999999999998 899999999987653
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=98.63 E-value=2e-07 Score=99.08 Aligned_cols=148 Identities=10% Similarity=0.089 Sum_probs=98.5
Q ss_pred CCceeEeecCCCccc-cccHHHHhh-cCCceEEEecCCCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHHH
Q psy1119 1156 NNNTIFMVPGIEGIA-TVLEPLAKN-INAQVLVFQFDHTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVAL 1233 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~-~~y~~La~~-L~~~~~v~~l~~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA~ 1233 (1392)
.+++++|+|+.+|+. ..|..+... +. ....+-+. .....+++++++.+.+.+... + .|+.|+||||||.+|.
T Consensus 16 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~-~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~---~-~~~~l~G~S~Gg~~a~ 89 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDDEHWQSHWERRFP-HWQRIRQR-EWYQADLDRWVLAIRRELSVC---T-QPVILIGHSFGALAAC 89 (191)
T ss_dssp TTCEEEEECCTTCCCTTSHHHHHHHHCT-TSEECCCS-CCSSCCHHHHHHHHHHHHHTC---S-SCEEEEEETHHHHHHH
T ss_pred CCceEEEECCCCCCchhhHHHHHHHhcC-CeEEEecc-CCCCcCHHHHHHHHHHHHHhc---C-CCeEEEEEChHHHHHH
Confidence 347899999999988 566665554 44 33222222 223568999999988887632 3 7899999999999999
Q ss_pred HHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHHHHHHHhhccccCCCC
Q psy1119 1234 ELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDPKH 1312 (1392)
Q Consensus 1234 EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~y~~~~~ 1312 (1392)
++|.+ ....+ .++++++..... .. ++.. ...
T Consensus 90 ~~a~~---~p~~v~~lvl~~~~~~~~-~~-----------------~~~~---------------------------~~~ 121 (191)
T 3bdv_A 90 HVVQQ---GQEGIAGVMLVAPAEPMR-FE-----------------IDDR---------------------------IQA 121 (191)
T ss_dssp HHHHT---TCSSEEEEEEESCCCGGG-GT-----------------CTTT---------------------------SCS
T ss_pred HHHHh---cCCCccEEEEECCCcccc-cc-----------------Cccc---------------------------ccc
Confidence 99876 23345 777777643211 00 0000 112
Q ss_pred CcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-Ccccccc
Q psy1119 1313 KAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHFTVLD 1359 (1392)
Q Consensus 1313 ~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~~ml~ 1359 (1392)
.++++|++++.+++|. ........|.+.. ..+++.++| +|+.+.+
T Consensus 122 ~~~~~P~lii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~ 168 (191)
T 3bdv_A 122 SPLSVPTLTFASHNDPLMSFTRAQYWAQAW--DSELVDVGEAGHINAEA 168 (191)
T ss_dssp SCCSSCEEEEECSSBTTBCHHHHHHHHHHH--TCEEEECCSCTTSSGGG
T ss_pred ccCCCCEEEEecCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCcccccc
Confidence 3688999999999887 4444444455544 567888885 8998884
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=98.63 E-value=5e-07 Score=110.51 Aligned_cols=202 Identities=14% Similarity=0.121 Sum_probs=119.8
Q ss_pred CCCceeEeecCCCccccccHHHHhhc-CCceEEEecC--------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNI-NAQVLVFQFD--------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L-~~~~~v~~l~--------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
|.++||+|+|+.+++...|.++++.| ...+.++.++ ......+++++++++.+.++.. ...|+.|+||
T Consensus 22 G~gp~VV~lHG~~~~~~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~~~~s~~~~a~dl~~~l~~l---~~~~v~LvGh 98 (456)
T 3vdx_A 22 GTGVPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETL---DLQDAVLVGF 98 (456)
T ss_dssp SSSEEEEEECCTTCCGGGGTTHHHHHHHHTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH---TCCSEEEEEE
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCeEEEEE
Confidence 45689999999999999999999999 5567888876 1123458999999998888744 3568999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCC--hHHH---------------HHHHHhc-CCc----c
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPD--WNAK---------------LNYFLDL-MPE----D 1282 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~--~~~~---------------l~~~~~~-~~~----~ 1282 (1392)
||||.+|..+|.+.. -..+ .++++++.++........... .... +..+... ... .
T Consensus 99 S~GG~ia~~~aa~~~--p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (456)
T 3vdx_A 99 SMGTGEVARYVSSYG--TARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLG 176 (456)
T ss_dssp GGGGHHHHHHHHHHC--SSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBT
T ss_pred CHHHHHHHHHHHhcc--hhheeEEEEeCCcccccccccccccccchHHHHHHHHHhhhccchHHHHHHHHHHhccccccc
Confidence 999999998887652 2335 778888765432111100000 0011 1111111 110 0
Q ss_pred ccCCHHHHHHHHHHHH-----HHHHhhcccc---CCCCCcccceEEEEeeCCCC-CCCh-hhcCcccccCCCeEEEEEcc
Q psy1119 1283 ATHSRTYQRNLAHAAY-----KRITSILKYT---DPKHKAFGGNITLLRPTEQA-LPTA-EDYGLSKVCKKPVKVHFVDG 1352 (1392)
Q Consensus 1283 ~~~~~~~l~~~~~~~~-----~~~~~~~~y~---~~~~~~~~~pi~l~~a~~~~-~~~~-~~~~W~~~~~g~v~v~~v~G 1352 (1392)
.....+.......... ........+. ......+++|++++.++.|. .... ....+.+.. ...+++.++|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~l~~~~-~~~~~~~i~g 255 (456)
T 3vdx_A 177 TRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKAL-PSAEYVEVEG 255 (456)
T ss_dssp TTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTTSTTCCSCCEEEEETTCSSSCGGGTHHHHHHHC-TTSEEEEETT
T ss_pred ccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHHhhhCCCCEEEEEeCCCCCcCHHHHHHHHHHHC-CCceEEEeCC
Confidence 1113333322221111 0111111111 11234678999999999987 4333 222333433 4578999996
Q ss_pred -CccccccChH
Q psy1119 1353 -NHFTVLDNIK 1362 (1392)
Q Consensus 1353 -~H~~ml~~~~ 1362 (1392)
+|+.+++++.
T Consensus 256 agH~~~~e~p~ 266 (456)
T 3vdx_A 256 APHGLLWTHAE 266 (456)
T ss_dssp CCSCTTTTTHH
T ss_pred CCCcchhhCHH
Confidence 8998888775
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.4e-07 Score=117.40 Aligned_cols=151 Identities=17% Similarity=0.072 Sum_probs=111.3
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
.+++|||||+|.||.++++.|+++|.+ |+.++|+..... .+.+|+.+.. ...+.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~-V~~l~R~~~~~~-----------------~v~~d~~~~~--------~~~l~ 200 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHE-VIQLVRKEPKPG-----------------KRFWDPLNPA--------SDLLD 200 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESSSCCTT-----------------CEECCTTSCC--------TTTTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCCCCcc-----------------ceeecccchh--------HHhcC
Confidence 468999999999999999999999996 888888854320 1567776421 13356
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc-C----------CCCCh
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR-G----------NAGQT 929 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~-G----------~~gq~ 929 (1392)
.+|.|||+|+..... ..+.+.+...+++|+.|+.+|.+++... .....||++||++..- . ..+..
T Consensus 201 ~~D~Vih~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a~~-~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~ 276 (516)
T 3oh8_A 201 GADVLVHLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVAES-TQCTTMISASAVGFYGHDRGDEILTEESESGDD 276 (516)
T ss_dssp TCSEEEECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHHHC-SSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSS
T ss_pred CCCEEEECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeCcceEecCCCCCCccCCCCCCCcC
Confidence 899999999975332 4456678889999999999999874322 2457899999976432 0 12456
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 930 NYGMANSIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
.|+..+...+.++.+.+..|++.+.+..|.+-
T Consensus 277 ~y~~~~~~~E~~~~~~~~~gi~~~ilRp~~v~ 308 (516)
T 3oh8_A 277 FLAEVCRDWEHATAPASDAGKRVAFIRTGVAL 308 (516)
T ss_dssp HHHHHHHHHHHTTHHHHHTTCEEEEEEECEEE
T ss_pred hHHHHHHHHHHHHHHHHhCCCCEEEEEeeEEE
Confidence 78888888888888878889999998887663
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.61 E-value=1.6e-07 Score=109.46 Aligned_cols=93 Identities=19% Similarity=0.269 Sum_probs=70.1
Q ss_pred CceeEeecCCCccccccHHHHhhcC--CceEEEecC------CCC--C----CCCHHHHHHHHHHHHhhhccCCCCcEEE
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNIN--AQVLVFQFD------HTN--P----PDTIPEMADSLLPHFKKRLVHGTDEIKL 1222 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~--~~~~v~~l~------~e~--~----~~sieelA~~y~~~I~~~q~qp~gPy~L 1222 (1392)
++||+|+|+.+|+...|......|. ....|+.++ ... + ..+++.+|+++.+.+... +-.+++|
T Consensus 54 g~plvllHG~~~~~~~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~~~~~~~~~~~a~dl~~ll~~l---g~~~~~l 130 (330)
T 3nwo_A 54 ALPLIVLHGGPGMAHNYVANIAALADETGRTVIHYDQVGCGNSTHLPDAPADFWTPQLFVDEFHAVCTAL---GIERYHV 130 (330)
T ss_dssp CCCEEEECCTTTCCSGGGGGGGGHHHHHTCCEEEECCTTSTTSCCCTTSCGGGCCHHHHHHHHHHHHHHH---TCCSEEE
T ss_pred CCcEEEECCCCCCchhHHHHHHHhccccCcEEEEECCCCCCCCCCCCCCccccccHHHHHHHHHHHHHHc---CCCceEE
Confidence 3589999999999888887777775 356777775 111 1 137899999988887743 3468999
Q ss_pred EeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1223 VGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1223 ~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
+||||||.||.++|.+ .-+.+ .|+++++++
T Consensus 131 vGhSmGG~va~~~A~~---~P~~v~~lvl~~~~~ 161 (330)
T 3nwo_A 131 LGQSWGGMLGAEIAVR---QPSGLVSLAICNSPA 161 (330)
T ss_dssp EEETHHHHHHHHHHHT---CCTTEEEEEEESCCS
T ss_pred EecCHHHHHHHHHHHh---CCccceEEEEecCCc
Confidence 9999999999999985 23445 788888754
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=98.61 E-value=3.9e-07 Score=105.60 Aligned_cols=93 Identities=14% Similarity=0.198 Sum_probs=73.3
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCC---CCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNP---PDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~---~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
++||+|+|+.+++...|.+++..|.....|+.++ ...+ .-+++++++.+.+.+... ....|++|+||||
T Consensus 43 ~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~GhG~S~~~~~~~~~~~~~a~dl~~ll~~l--~~~~~~~lvGhSm 120 (318)
T 2psd_A 43 ENAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKSGNGSYRLLDHYKYLTAWFELL--NLPKKIIFVGHDW 120 (318)
T ss_dssp TSEEEEECCTTCCGGGGTTTGGGTTTTSEEEEECCTTSTTCCCCTTSCCSHHHHHHHHHHHHTTS--CCCSSEEEEEEEH
T ss_pred CCeEEEECCCCCcHHHHHHHHHHhhhcCeEEEEeCCCCCCCCCCCCCccCHHHHHHHHHHHHHhc--CCCCCeEEEEECh
Confidence 3599999999999999999999998777888876 1112 247999999988888743 2226899999999
Q ss_pred hHHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1228 GGMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
||.||.++|.+- .+.+ .|+++|+.
T Consensus 121 Gg~ia~~~A~~~---P~~v~~lvl~~~~ 145 (318)
T 2psd_A 121 GAALAFHYAYEH---QDRIKAIVHMESV 145 (318)
T ss_dssp HHHHHHHHHHHC---TTSEEEEEEEEEC
T ss_pred hHHHHHHHHHhC---hHhhheEEEeccc
Confidence 999999999753 3456 88998863
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=98.60 E-value=2.7e-07 Score=105.23 Aligned_cols=139 Identities=13% Similarity=0.028 Sum_probs=98.7
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
++++|||+ |.||.++++.|+++|.+ |+.++|+.... ..+...+ +.++.+|++|.+ +..
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~~-V~~~~r~~~~~-------~~~~~~~--~~~~~~D~~d~~-----------~~~ 63 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGWR-IIGTSRNPDQM-------EAIRASG--AEPLLWPGEEPS-----------LDG 63 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTCE-EEEEESCGGGH-------HHHHHTT--EEEEESSSSCCC-----------CTT
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCCE-EEEEEcChhhh-------hhHhhCC--CeEEEecccccc-----------cCC
Confidence 57999998 99999999999999996 78888875322 1122234 677889999932 567
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC-----------Chh
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG-----------QTN 930 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g-----------q~~ 930 (1392)
+|.|||+|+..... . ..+.++.+++.........||++||.+..-...+ ...
T Consensus 64 ~d~vi~~a~~~~~~-----~------------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~ 126 (286)
T 3ius_A 64 VTHLLISTAPDSGG-----D------------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAA 126 (286)
T ss_dssp CCEEEECCCCBTTB-----C------------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSH
T ss_pred CCEEEECCCccccc-----c------------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCH
Confidence 99999999975432 0 0124555555442224578999999754322222 347
Q ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEEccccC
Q psy1119 931 YGMANSIMERICEARRAEGLPGLAVEWGAVG 961 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~Glp~~ai~~g~~~ 961 (1392)
|+.+|...+.+++.. .|++.+.+..+.+-
T Consensus 127 Y~~sK~~~E~~~~~~--~~~~~~ilRp~~v~ 155 (286)
T 3ius_A 127 RGRWRVMAEQQWQAV--PNLPLHVFRLAGIY 155 (286)
T ss_dssp HHHHHHHHHHHHHHS--TTCCEEEEEECEEE
T ss_pred HHHHHHHHHHHHHhh--cCCCEEEEeccceE
Confidence 999999999999875 68998888887653
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=98.59 E-value=2e-07 Score=109.26 Aligned_cols=94 Identities=21% Similarity=0.304 Sum_probs=69.9
Q ss_pred CceeEeecCCCcccc-------------ccHHHHh---hc-CCceEEEecC--C--C---CC----------------CC
Q psy1119 1157 NNTIFMVPGIEGIAT-------------VLEPLAK---NI-NAQVLVFQFD--H--T---NP----------------PD 1196 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~-------------~y~~La~---~L-~~~~~v~~l~--~--e---~~----------------~~ 1196 (1392)
++||+|+|+.+|+.. .|.+++. .| .....|+.++ + . .+ ..
T Consensus 46 ~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~~~~~~~~~~~~~~~~~~ 125 (366)
T 2pl5_A 46 NNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFV 125 (366)
T ss_dssp CCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCC
T ss_pred CceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCCCCCCCCCccccCCCCcc
Confidence 578999999999998 6788774 34 5567777775 3 1 01 24
Q ss_pred CHHHHHHHHHHHHhhhccCCCCcE-EEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1197 TIPEMADSLLPHFKKRLVHGTDEI-KLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1197 sieelA~~y~~~I~~~q~qp~gPy-~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
+++++++++.+.++.. ...++ +|+||||||.+|+++|.+. ...+ .++++++.+.
T Consensus 126 ~~~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~ 181 (366)
T 2pl5_A 126 SIQDMVKAQKLLVESL---GIEKLFCVAGGSMGGMQALEWSIAY---PNSLSNCIVMASTAE 181 (366)
T ss_dssp CHHHHHHHHHHHHHHT---TCSSEEEEEEETHHHHHHHHHHHHS---TTSEEEEEEESCCSB
T ss_pred cHHHHHHHHHHHHHHc---CCceEEEEEEeCccHHHHHHHHHhC---cHhhhheeEeccCcc
Confidence 8999999998888643 34566 8999999999999999753 2345 7888887653
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=5.1e-07 Score=111.96 Aligned_cols=94 Identities=13% Similarity=0.272 Sum_probs=74.0
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCc-eEEEecC------CCCC----CCCHHHHHHHHHHHHhhhccCCCCcEEEE
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQ-VLVFQFD------HTNP----PDTIPEMADSLLPHFKKRLVHGTDEIKLV 1223 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~-~~v~~l~------~e~~----~~sieelA~~y~~~I~~~q~qp~gPy~L~ 1223 (1392)
|.++||+++|+.+|+...|.++++.|... ..|+.++ ...+ ..+++++++.+.+.++.. +..|+.|+
T Consensus 256 g~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~d~~~~~~~l---~~~~~~lv 332 (555)
T 3i28_A 256 GSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKL---GLSQAVFI 332 (555)
T ss_dssp CSSSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTSCCCSCGGGGSHHHHHHHHHHHHHHH---TCSCEEEE
T ss_pred CCCCEEEEEeCCCCchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCcccccHHHHHHHHHHHHHHc---CCCcEEEE
Confidence 45689999999999999999999999764 7888876 1111 236899999988888744 45689999
Q ss_pred eechhHHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1224 GFSFGGMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1224 G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
||||||.+|+++|.+.. ..+ .+++++++
T Consensus 333 GhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~ 361 (555)
T 3i28_A 333 GHDWGGMLVWYMALFYP---ERVRAVASLNTP 361 (555)
T ss_dssp EETHHHHHHHHHHHHCG---GGEEEEEEESCC
T ss_pred EecHHHHHHHHHHHhCh---HheeEEEEEccC
Confidence 99999999999998642 235 77888764
|
| >1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A | Back alignment and structure |
|---|
Probab=98.58 E-value=8.3e-08 Score=86.91 Aligned_cols=69 Identities=22% Similarity=0.330 Sum_probs=62.6
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchh-hcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLA-ELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~-~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
+.+.+.|++++++ +.++++++.+|+ ++|+|||.+++|..+|+++||+.++..++ ..+|++++++++...
T Consensus 6 ~~l~~~~~~~l~~-~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~ 76 (78)
T 1l0i_A 6 ERVKKIIGEQLGV-KQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKMTTVQAAIDYINGH 76 (78)
T ss_dssp HHHHHHHHHHHTC-CGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCC-CHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHh
Confidence 4688899999998 458899999996 99999999999999999999999999999 789999999988654
|
| >2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A | Back alignment and structure |
|---|
Probab=98.57 E-value=7.9e-08 Score=86.67 Aligned_cols=69 Identities=19% Similarity=0.340 Sum_probs=62.9
Q ss_pred chHHHHHHHHhCCCCCcccCcCcch-hhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTL-AELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l-~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
+.+.+.|++++++ +.++++++.+| +++|+|||.+++|..+++++||+.++..++ ..+|+++|++++...
T Consensus 4 ~~l~~~~~~~l~~-~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~~gi~i~~~~~~~~~tv~~l~~~i~~~ 74 (77)
T 2ehs_A 4 ERVKEIIAEQLGV-EKEKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEIPDEDAEKIQTVGDVINYLKEK 74 (77)
T ss_dssp HHHHHHHHHHHCC-CGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-ChhhCCCccchhhccCCCHHHHHHHHHHHHHHhCCccCHHHHHHcCCHHHHHHHHHHH
Confidence 4578899999998 45789999999 999999999999999999999999999999 889999999988654
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=1.1e-06 Score=99.41 Aligned_cols=93 Identities=18% Similarity=0.118 Sum_probs=72.9
Q ss_pred CceeEeecCCCccccccHHHHhhcC-CceEEEecC----C--CC-C--CCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNIN-AQVLVFQFD----H--TN-P--PDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~-~~~~v~~l~----~--e~-~--~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
++||+|+|+.+++...|.+++..|. ....|+.++ + .. + ..+++++|+++.+.+... ....|++|+|||
T Consensus 4 ~~~vvllHG~~~~~~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l--~~~~~~~lvGhS 81 (273)
T 1xkl_A 4 GKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESL--SADEKVILVGHS 81 (273)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTS--CSSSCEEEEEET
T ss_pred CCeEEEECCCCCCcchHHHHHHHHHhCCCEEEEecCCCCCCCccCcccccCHHHHHHHHHHHHHHh--ccCCCEEEEecC
Confidence 4789999999999999999999996 458888876 1 11 1 258999999998888633 113689999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
|||.||.++|.+- .+.+ .|+++++.
T Consensus 82 mGG~va~~~a~~~---P~~v~~lvl~~~~ 107 (273)
T 1xkl_A 82 LGGMNLGLAMEKY---PQKIYAAVFLAAF 107 (273)
T ss_dssp THHHHHHHHHHHC---GGGEEEEEEESCC
T ss_pred HHHHHHHHHHHhC---hHhheEEEEEecc
Confidence 9999999998753 3346 88999875
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=1.5e-06 Score=99.21 Aligned_cols=94 Identities=19% Similarity=0.298 Sum_probs=73.9
Q ss_pred CCceeEeecCCCccccccHH-HHhhcCCc-eEEEecC------CCC-----CCCCHHHHHHHHHHHHhhhccCCCCcEEE
Q psy1119 1156 NNNTIFMVPGIEGIATVLEP-LAKNINAQ-VLVFQFD------HTN-----PPDTIPEMADSLLPHFKKRLVHGTDEIKL 1222 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~-La~~L~~~-~~v~~l~------~e~-----~~~sieelA~~y~~~I~~~q~qp~gPy~L 1222 (1392)
.++||+++|+.+++...|.+ ++..|... ..|+.++ ... ...+++++|+++.+.+... ...+++|
T Consensus 22 ~~~~vvllHG~~~~~~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~l 98 (298)
T 1q0r_A 22 ADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVAVLDGW---GVDRAHV 98 (298)
T ss_dssp TSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHHHHHHHHHHHT---TCSSEEE
T ss_pred CCCeEEEEcCCCCCccchHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCCcCCcCHHHHHHHHHHHHHHh---CCCceEE
Confidence 35799999999999999976 77888765 8888876 111 1358999999998888743 3468999
Q ss_pred EeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1223 VGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1223 ~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
+||||||.||.++|.+- .+.+ .|+++++.+
T Consensus 99 vGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~ 129 (298)
T 1q0r_A 99 VGLSMGATITQVIALDH---HDRLSSLTMLLGGG 129 (298)
T ss_dssp EEETHHHHHHHHHHHHC---GGGEEEEEEESCCC
T ss_pred EEeCcHHHHHHHHHHhC---chhhheeEEecccC
Confidence 99999999999999753 2346 889998865
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=7.1e-07 Score=105.01 Aligned_cols=94 Identities=14% Similarity=0.192 Sum_probs=73.3
Q ss_pred CCceeEeecCCCccccccHHHHhhcCC-ceEEEecC------CCCC----CCCHHHHHHHHHHHHhhhccCCCCcEEEEe
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD------HTNP----PDTIPEMADSLLPHFKKRLVHGTDEIKLVG 1224 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~------~e~~----~~sieelA~~y~~~I~~~q~qp~gPy~L~G 1224 (1392)
.++||+|+|+.+|+...|.+++..|.. ...++.++ ...+ ..+++++++.+.+.+... +..+++|+|
T Consensus 26 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~l~G 102 (356)
T 2e3j_A 26 QGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKELVGDVVGVLDSY---GAEQAFVVG 102 (356)
T ss_dssp CSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCCSGGGGSHHHHHHHHHHHHHHT---TCSCEEEEE
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHc---CCCCeEEEE
Confidence 457999999999999999999998865 47777775 1112 248999999998888743 346899999
Q ss_pred echhHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1225 FSFGGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1225 ~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
|||||.+|+++|.+.. ..+ .++++++++
T Consensus 103 ~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 103 HDWGAPVAWTFAWLHP---DRCAGVVGISVPF 131 (356)
T ss_dssp ETTHHHHHHHHHHHCG---GGEEEEEEESSCC
T ss_pred ECHhHHHHHHHHHhCc---HhhcEEEEECCcc
Confidence 9999999999997643 235 788888754
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=98.53 E-value=8.1e-07 Score=100.79 Aligned_cols=94 Identities=22% Similarity=0.320 Sum_probs=66.6
Q ss_pred ceeEeecCCCcccc-ccHHHHhhcCCceEEEecC------CCCCC---CCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1158 NTIFMVPGIEGIAT-VLEPLAKNINAQVLVFQFD------HTNPP---DTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~-~y~~La~~L~~~~~v~~l~------~e~~~---~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
+||+|+|+..|+.. .|..++..+.....|+.++ ...+. .+++++++++.+.+... ....|++|+||||
T Consensus 29 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~dl~~~~~~l--~~~~~~~lvGhS~ 106 (293)
T 1mtz_A 29 AKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKL--FGNEKVFLMGSSY 106 (293)
T ss_dssp EEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHHHHHHHHHHH--HTTCCEEEEEETH
T ss_pred CeEEEEeCCCCcchhHHHHHHHHHhcCcEEEEecCCCCccCCCCCCCcccHHHHHHHHHHHHHHh--cCCCcEEEEEecH
Confidence 78999999766654 4455655554458888876 12222 58899998877766533 0235899999999
Q ss_pred hHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1228 GGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
||.||+++|.+-. ..+ .|+++++.+.
T Consensus 107 Gg~va~~~a~~~p---~~v~~lvl~~~~~~ 133 (293)
T 1mtz_A 107 GGALALAYAVKYQ---DHLKGLIVSGGLSS 133 (293)
T ss_dssp HHHHHHHHHHHHG---GGEEEEEEESCCSB
T ss_pred HHHHHHHHHHhCc---hhhheEEecCCccC
Confidence 9999999998653 235 7888887543
|
| >2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C* | Back alignment and structure |
|---|
Probab=98.53 E-value=1.1e-07 Score=86.92 Aligned_cols=69 Identities=28% Similarity=0.358 Sum_probs=62.1
Q ss_pred chHHHHHHHHhCCCCCc-ccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGLRDLK-TVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~-~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
..+.+.|+++++++ .+ +++++.+|+++|+|||++++|..+|+++||+.++..++ ..+|+++|++++...
T Consensus 7 ~~l~~i~~~~l~~~-~~~~i~~~~~l~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 77 (82)
T 2ava_A 7 DKVSDIVKEKLALG-ADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEGL 77 (82)
T ss_dssp HHHHHHHHHHTTCS-SSSCCCSSCCSCCCTTCCSCHHHHHHHHHHHTTCCCCGGGSSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC-cccccCCCCchhhcCCCHHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHH
Confidence 45788999999984 34 89999999999999999999999999999999999998 789999999987653
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=98.52 E-value=2.6e-07 Score=105.17 Aligned_cols=186 Identities=13% Similarity=0.138 Sum_probs=108.8
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCC-ceEEEecC----CCC----CCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD----HTN----PPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~----~e~----~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
|.+++++|+|+.+|+...|.+|++.|.. .+.|+.++ +.. ...++++++++..+.+... .+...+..|+||
T Consensus 49 G~~~~VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~~~l-~~~~~~v~lvG~ 127 (281)
T 4fbl_A 49 GSRIGVLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDWTADIVAAMRWL-EERCDVLFMTGL 127 (281)
T ss_dssp CSSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTSSSCHHHHHTCCHHHHHHHHHHHHHHH-HHHCSEEEEEEE
T ss_pred CCCceEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCccccCCCHHHHHHHHHHHHHHH-HhCCCeEEEEEE
Confidence 4556799999999999999999999975 48888876 111 2357777777766665432 112358999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCC-------c--------cccC---C
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMP-------E--------DATH---S 1286 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~-------~--------~~~~---~ 1286 (1392)
||||.+|..+|.+. ...+ .+++++++.... ........+....+ . .... .
T Consensus 128 S~GG~ia~~~a~~~---p~~v~~lvl~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (281)
T 4fbl_A 128 SMGGALTVWAAGQF---PERFAGIMPINAALRME--------SPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTP 196 (281)
T ss_dssp THHHHHHHHHHHHS---TTTCSEEEEESCCSCCC--------CHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEEE
T ss_pred CcchHHHHHHHHhC---chhhhhhhcccchhccc--------chhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccCc
Confidence 99999999998753 3345 778886643211 10000000000000 0 0000 0
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCCcccceEEEEeeCCCC-CCChhhcCccccc-CCCeEEEEEcc-CccccccC
Q psy1119 1287 RTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVC-KKPVKVHFVDG-NHFTVLDN 1360 (1392)
Q Consensus 1287 ~~~l~~~~~~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~-~g~v~v~~v~G-~H~~ml~~ 1360 (1392)
...+..+.... .. ... ...++++|++++.+++|. ........+.+.. ....+++.+|| +|+.+++.
T Consensus 197 ~~~~~~~~~~~-~~---~~~----~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~~e~ 265 (281)
T 4fbl_A 197 VPAIKHLITIG-AV---AEM----LLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVATLDN 265 (281)
T ss_dssp GGGHHHHHHHH-HH---HHH----HGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEESSCCSCGGGST
T ss_pred hHHHHHHHHhh-hh---ccc----cccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEECCCCCcCcccc
Confidence 01111111111 11 111 112688999999999987 5544444444433 34578889985 89877764
|
| >2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.51 E-value=1.6e-07 Score=89.24 Aligned_cols=72 Identities=21% Similarity=0.268 Sum_probs=63.8
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchh-hcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcccCC
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLA-ELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSFEND 1092 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~-~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~~~~ 1092 (1392)
+.+.+.|++++++ +.++|+++.+|+ ++|+|||.+++|..+|+++||++++..++ ...|+.+|++++......
T Consensus 18 ~~l~~~l~~~l~~-~~~~i~~d~~l~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~~~ 91 (99)
T 2dnw_A 18 DRVLYVLKLYDKI-DPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIADKKDV 91 (99)
T ss_dssp HHHHHHHHHCTTS-CTTTCCTTCCCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCSHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHhCC-CHhhCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHHHhcc
Confidence 4577888888998 458899999994 99999999999999999999999999999 789999999998876543
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=98.50 E-value=8.7e-07 Score=99.87 Aligned_cols=190 Identities=16% Similarity=0.214 Sum_probs=103.4
Q ss_pred CCceeEeecCCC-----ccccccHHHHhhc-----CCceEEEecC-CC----CCCCCHHHHHHHHHHHHhhhccCCCCcE
Q psy1119 1156 NNNTIFMVPGIE-----GIATVLEPLAKNI-----NAQVLVFQFD-HT----NPPDTIPEMADSLLPHFKKRLVHGTDEI 1220 (1392)
Q Consensus 1156 ~~~pLF~vp~ag-----G~~~~y~~La~~L-----~~~~~v~~l~-~e----~~~~sieelA~~y~~~I~~~q~qp~gPy 1220 (1392)
..++|+++|++| |+...|..+++.| ...+.|+.++ .. .....++++++.+...+. . . +..++
T Consensus 40 ~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~-~-~-~~~~i 116 (273)
T 1vkh_A 40 TREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNPRNLYDAVSNITRLVK-E-K-GLTNI 116 (273)
T ss_dssp CCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTTHHHHHHHHHHHHHHH-H-H-TCCCE
T ss_pred CCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCCCCcHHHHHHHHHHHHHH-h-C-CcCcE
Confidence 346789999976 5677899999988 5667777776 11 122344555554433333 2 2 34689
Q ss_pred EEEeechhHHHHHHHHHHHHHc--------------CCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccC
Q psy1119 1221 KLVGFSFGGMVALELAIKLEQL--------------GTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATH 1285 (1392)
Q Consensus 1221 ~L~G~S~Gg~VA~EmA~~Le~~--------------G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~ 1285 (1392)
.|+||||||.+|.++|.++... ...+ .++++.+..+.. ........+...+...+.........
T Consensus 117 ~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (273)
T 1vkh_A 117 NMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLK-ELLIEYPEYDCFTRLAFPDGIQMYEE 195 (273)
T ss_dssp EEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHH-HHHHHCGGGHHHHHHHCTTCGGGCCC
T ss_pred EEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHH-HhhhhcccHHHHHHHHhcccccchhh
Confidence 9999999999999999875221 1234 566665532211 00000111222222221111111110
Q ss_pred CHHHHHHHHHHHHHHHHhhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccc---cCCCeEEEEEc-cCccccccC
Q psy1119 1286 SRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKV---CKKPVKVHFVD-GNHFTVLDN 1360 (1392)
Q Consensus 1286 ~~~~l~~~~~~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~---~~g~v~v~~v~-G~H~~ml~~ 1360 (1392)
.... ..+.+.... ..+.+|++++.+++|. ........+.+. ...+++++.++ ++|..++++
T Consensus 196 ~~~~---~~~~~~~~~-----------~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~ 261 (273)
T 1vkh_A 196 EPSR---VMPYVKKAL-----------SRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN 261 (273)
T ss_dssp CHHH---HHHHHHHHH-----------HHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC
T ss_pred cccc---cChhhhhcc-----------cccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCcccccccC
Confidence 1111 111111000 1266899999999887 444433333332 23468899998 589998888
Q ss_pred hHH
Q psy1119 1361 IKS 1363 (1392)
Q Consensus 1361 ~~~ 1363 (1392)
+.+
T Consensus 262 ~~~ 264 (273)
T 1vkh_A 262 GKV 264 (273)
T ss_dssp HHH
T ss_pred hHH
Confidence 443
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=98.50 E-value=1.6e-06 Score=97.06 Aligned_cols=94 Identities=20% Similarity=0.153 Sum_probs=74.2
Q ss_pred CceeEeecCCCccccccHHHHhhcCC-ceEEEecC------CCCC---CCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD------HTNP---PDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~------~e~~---~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
++||+|+|+.+++.++|.+++..|.. ...|+.++ ...+ ..+++++|+++.+.|... ....|.+|+|||
T Consensus 3 ~~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l--~~~~~~~lvGhS 80 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEAL--PPGEKVILVGES 80 (257)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHTS--CTTCCEEEEEEE
T ss_pred CCcEEEEcCCccCcCCHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcccccCHHHHHHHHHHHHHhc--cccCCeEEEEEC
Confidence 47899999999999999999999964 58888876 1111 258999999998888733 123589999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
|||.||.++|.+.- +.+ .|+++++.+
T Consensus 81 mGG~va~~~a~~~p---~~v~~lVl~~~~~ 107 (257)
T 3c6x_A 81 CGGLNIAIAADKYC---EKIAAAVFHNSVL 107 (257)
T ss_dssp THHHHHHHHHHHHG---GGEEEEEEEEECC
T ss_pred cchHHHHHHHHhCc---hhhheEEEEeccc
Confidence 99999999997653 245 899999854
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=98.50 E-value=1.4e-08 Score=133.95 Aligned_cols=100 Identities=33% Similarity=0.489 Sum_probs=0.0
Q ss_pred CceeEeeccccCCCC-cccccccchh-hHH----HHHHHHHHHHHHHcCCCCccCCEEeeeeeeeeeeeeCCCCeEEEEE
Q psy1119 33 GLVQLKNSFRSLSAS-PKRLASTALD-RVY----QRFQMAWETVSLMRGELYTEVPVVFENIKFMRATNVPKEGSVEFIV 106 (1392)
Q Consensus 33 ~~~~~~~~~~~~~~~-~~~l~gh~id-r~l----~yl~l~W~t~a~~~~~~~~~~pv~fe~v~~~rat~l~~~~~v~~~v 106 (1392)
+...++++++ .++ ..||.||+|+ ++| ||+.++|++++.+.+......|+.|+|++|+++.+||+++.+++.|
T Consensus 860 ~~~~~~~~~~--~~~~~pwl~~H~v~g~~~~P~a~y~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~v 937 (965)
T 3hhd_A 860 SAAIYNIDTS--SESPDHYLVDHTLDGRVLFPATGYLSIVWKTLARALGLGVEQLPVVFEDVVLHQATILPKTGTVSLEV 937 (965)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEeecC--ccccCccccCceeCCeEecCcHHHHHHHHHHHHHHhCCCcccCceEEEeeEecCCEEecCCCcEEEEE
Confidence 4566777777 555 3499999999 999 9999999999988888888889999999999999999999999999
Q ss_pred EEEeccccEEEeeCCcEEEEEEEEccCC
Q psy1119 107 MVQKGSGNFEIVEGGAAIVTGKVYIPAD 134 (1392)
Q Consensus 107 ~i~~~sg~Fei~~~~~~vvsG~i~~~~~ 134 (1392)
.+.+++|.|||.++++++|||+|+++++
T Consensus 938 ~~~~~~~~feI~s~~~~h~tG~i~~~~~ 965 (965)
T 3hhd_A 938 RLLEASRAFEVSENGNLVVSGKVYQWDD 965 (965)
T ss_dssp ----------------------------
T ss_pred EEecCCCcEEEEECCEEEEEEEEEecCC
Confidence 9999999999999999999999998764
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.50 E-value=9.4e-07 Score=98.08 Aligned_cols=93 Identities=14% Similarity=0.129 Sum_probs=64.0
Q ss_pred CCceeEeecCCC---cccccc-HHHHhhcCCceEEEecC-CCCCCCCHHHHHHHHHHH---HhhhccCCCCcEEEEeech
Q psy1119 1156 NNNTIFMVPGIE---GIATVL-EPLAKNINAQVLVFQFD-HTNPPDTIPEMADSLLPH---FKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1156 ~~~pLF~vp~ag---G~~~~y-~~La~~L~~~~~v~~l~-~e~~~~sieelA~~y~~~---I~~~q~qp~gPy~L~G~S~ 1227 (1392)
.+++|+++|+.+ |+...| ..+++.|...+.++.++ ...+..+.+...+++.+. ++.. .+..|..|+||||
T Consensus 28 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~ 105 (275)
T 3h04_A 28 TKGVIVYIHGGGLMFGKANDLSPQYIDILTEHYDLIQLSYRLLPEVSLDCIIEDVYASFDAIQSQ--YSNCPIFTFGRSS 105 (275)
T ss_dssp CSEEEEEECCSTTTSCCTTCSCHHHHHHHTTTEEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHT--TTTSCEEEEEETH
T ss_pred CCCEEEEEECCcccCCchhhhHHHHHHHHHhCceEEeeccccCCccccchhHHHHHHHHHHHHhh--CCCCCEEEEEecH
Confidence 346789999988 766544 48888887777777776 222334555555544433 3322 2457999999999
Q ss_pred hHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1228 GGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
||.+|+.+|.+ ..+ .++++.+..
T Consensus 106 Gg~~a~~~a~~-----~~v~~~v~~~~~~ 129 (275)
T 3h04_A 106 GAYLSLLIARD-----RDIDGVIDFYGYS 129 (275)
T ss_dssp HHHHHHHHHHH-----SCCSEEEEESCCS
T ss_pred HHHHHHHHhcc-----CCccEEEeccccc
Confidence 99999999998 345 777776543
|
| >1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.49 E-value=1.6e-07 Score=85.34 Aligned_cols=68 Identities=21% Similarity=0.331 Sum_probs=62.1
Q ss_pred chHHHHHHHHhCCCCCcccCcCcch-hhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTL-AELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVS 1088 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l-~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~ 1088 (1392)
..+.+.|++++++ +.++++++.+| .++|+|||.+++|..+|+++||+.++..++ ..+|+++|++++..
T Consensus 8 ~~l~~~i~~~l~~-~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 77 (80)
T 1x3o_A 8 EKVKAVIADKLQV-EPEKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEISDEEAEKIRTVKDAVEYIKA 77 (80)
T ss_dssp HHHHHHHHHHHTC-CGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCBHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CHHHCCCcCcHHhhcCccHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHH
Confidence 4578899999998 45889999999 999999999999999999999999999999 78999999998765
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=98.49 E-value=3.3e-07 Score=108.08 Aligned_cols=94 Identities=19% Similarity=0.282 Sum_probs=71.9
Q ss_pred CceeEeecCCCccccc---------cHHHHh---hc-CCceEEEecC--C-----CCC----------------CCCHHH
Q psy1119 1157 NNTIFMVPGIEGIATV---------LEPLAK---NI-NAQVLVFQFD--H-----TNP----------------PDTIPE 1200 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~---------y~~La~---~L-~~~~~v~~l~--~-----e~~----------------~~siee 1200 (1392)
++||+|+|+.+|+... |.+++. .| .....|+.++ + ..+ ..++++
T Consensus 59 ~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~~~~g~~~~~~~~~~~~~~ 138 (377)
T 2b61_A 59 NNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQD 138 (377)
T ss_dssp CCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHH
T ss_pred CCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccCccccccccccCCcccHHH
Confidence 5799999999999998 898885 48 6677888765 3 112 248999
Q ss_pred HHHHHHHHHhhhccCCCCcEE-EEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1201 MADSLLPHFKKRLVHGTDEIK-LVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1201 lA~~y~~~I~~~q~qp~gPy~-L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
+++.+.+.++.. ...+.. |+||||||.+|+++|.+. ...+ .++++++.+.
T Consensus 139 ~~~~l~~~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~ 190 (377)
T 2b61_A 139 IVKVQKALLEHL---GISHLKAIIGGSFGGMQANQWAIDY---PDFMDNIVNLCSSIY 190 (377)
T ss_dssp HHHHHHHHHHHT---TCCCEEEEEEETHHHHHHHHHHHHS---TTSEEEEEEESCCSS
T ss_pred HHHHHHHHHHHc---CCcceeEEEEEChhHHHHHHHHHHC---chhhheeEEeccCcc
Confidence 999998888643 334666 999999999999999764 2345 7888887643
|
| >2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str} | Back alignment and structure |
|---|
Probab=98.48 E-value=2.5e-07 Score=84.41 Aligned_cols=69 Identities=17% Similarity=0.256 Sum_probs=62.2
Q ss_pred chHHHHHHHHhCCCCCcccCcCcch-hhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTL-AELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l-~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
..+.+.|++++++ +.++++++.+| .++|+|||.+++|..+|+++||+.++..++ ..+|++++++++...
T Consensus 9 ~~l~~ii~~~l~~-~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 79 (81)
T 2lol_A 9 QKVIEMVAEKLNK-DKAIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDIPDDEATKIKTVSDVIKYIKER 79 (81)
T ss_dssp HHHHHHHHHHSCC-CTTTCCTTCCHHHHTTCCHHHHHHHHHHHHHHHCCCCCGGGGGGSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCC-ChhhCCCCCcHHHhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHh
Confidence 4578899999998 45889999999 599999999999999999999999999999 789999999987653
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=4e-07 Score=101.60 Aligned_cols=194 Identities=16% Similarity=0.184 Sum_probs=113.1
Q ss_pred CceeEeecCCCcc--ccccHHHHhhcCCc-eEEEecC--------CCCCCCCHHHHHHHHHHHHhhhcc-CCCCcEEEEe
Q psy1119 1157 NNTIFMVPGIEGI--ATVLEPLAKNINAQ-VLVFQFD--------HTNPPDTIPEMADSLLPHFKKRLV-HGTDEIKLVG 1224 (1392)
Q Consensus 1157 ~~pLF~vp~agG~--~~~y~~La~~L~~~-~~v~~l~--------~e~~~~sieelA~~y~~~I~~~q~-qp~gPy~L~G 1224 (1392)
+++|+|+|+.+|+ ...|..+++.|... +.++.++ ......+++++++++.+.+....- .+..|+.|+|
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G 125 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFENMTVLNEIEDANAILNYVKTDPHVRNIYLVG 125 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGCCHHHHHHHHHHHHHHHHTCTTEEEEEEEE
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCCCccCHHHHHHhHHHHHHHHHhCcCCCeEEEEE
Confidence 4679999999998 56689999998643 7777765 112235788888877766653311 1346899999
Q ss_pred echhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHH-------hcCCccc-----cCCHHHHH
Q psy1119 1225 FSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFL-------DLMPEDA-----THSRTYQR 1291 (1392)
Q Consensus 1225 ~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~-------~~~~~~~-----~~~~~~l~ 1291 (1392)
|||||.+|+.+|.+. ...+ .++++++...... ....... ...+... .....+..
T Consensus 126 ~S~Gg~~a~~~a~~~---p~~v~~~v~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (270)
T 3pfb_A 126 HAQGGVVASMLAGLY---PDLIKKVVLLAPAATLKG----------DALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLR 192 (270)
T ss_dssp ETHHHHHHHHHHHHC---TTTEEEEEEESCCTHHHH----------HHHHTEETTEECCTTSCCSEEEETTEEEEHHHHH
T ss_pred eCchhHHHHHHHHhC---chhhcEEEEeccccccch----------hhhhhhhhccccCcccccccccccccccchhHhh
Confidence 999999999998763 2335 6777765432110 0000000 0000000 00111111
Q ss_pred HHHHHHHHHHHhhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-CccccccChHHHHHHHh
Q psy1119 1292 NLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHFTVLDNIKSAQIIMH 1369 (1392)
Q Consensus 1292 ~~~~~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~~ml~~~~~~~i~~~ 1369 (1392)
. ....... .....+++|++++.++.|. ........|.+.. ...+++.++| +|+.+.+++ ......
T Consensus 193 ~--------~~~~~~~--~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~--~~~~~~ 259 (270)
T 3pfb_A 193 I--------AQQLPIY--EVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIY-QNSTLHLIEGADHCFSDSYQ--KNAVNL 259 (270)
T ss_dssp H--------HHHCCHH--HHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHC-SSEEEEEETTCCTTCCTHHH--HHHHHH
T ss_pred c--------ccccCHH--HHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhC-CCCeEEEcCCCCcccCccch--HHHHHH
Confidence 1 1000000 0112678999999999997 5555555566554 3578999996 898775433 345555
Q ss_pred hhcccCC
Q psy1119 1370 EDSTDFK 1376 (1392)
Q Consensus 1370 l~~~L~~ 1376 (1392)
+...|..
T Consensus 260 i~~fl~~ 266 (270)
T 3pfb_A 260 TTDFLQN 266 (270)
T ss_dssp HHHHHC-
T ss_pred HHHHHhh
Confidence 5555554
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=98.47 E-value=1.3e-06 Score=97.91 Aligned_cols=99 Identities=18% Similarity=0.184 Sum_probs=66.9
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEE--------------EecC---------------CCCCCCCHHHHHHHHHH
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLV--------------FQFD---------------HTNPPDTIPEMADSLLP 1207 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v--------------~~l~---------------~e~~~~sieelA~~y~~ 1207 (1392)
++|++++|+.+|+...|..+++.|.....+ +.+. .+....+++++++.+.+
T Consensus 3 ~~pvvllHG~~~~~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~ 82 (254)
T 3ds8_A 3 QIPIILIHGSGGNASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLKI 82 (254)
T ss_dssp CCCEEEECCTTCCTTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCcchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHHH
Confidence 479999999999999999999998643211 1111 11123588888887754
Q ss_pred HHhhhc-cCCCCcEEEEeechhHHHHHHHHHHHHHcC--Ccc-EEEEEeCCC
Q psy1119 1208 HFKKRL-VHGTDEIKLVGFSFGGMVALELAIKLEQLG--TKC-HLYLVDSAP 1255 (1392)
Q Consensus 1208 ~I~~~q-~qp~gPy~L~G~S~Gg~VA~EmA~~Le~~G--~~v-~LvLiD~~p 1255 (1392)
.+...+ ..+-.|+.|+||||||++|..+|.+..... ..+ .+++++++.
T Consensus 83 ~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~ 134 (254)
T 3ds8_A 83 AMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPF 134 (254)
T ss_dssp HHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCT
T ss_pred HHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCc
Confidence 443211 113468999999999999999887653322 145 788887754
|
| >1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=98.47 E-value=1.4e-07 Score=86.59 Aligned_cols=69 Identities=22% Similarity=0.326 Sum_probs=62.5
Q ss_pred chHHHHHHHHhCCCCCc-ccC--cCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGLRDLK-TVS--LHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~-~i~--~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
..+.+.|++.+++.. + +++ ++.+|.++|+|||.+++|..+|+++||+.+|..++ ..+|++++++++...
T Consensus 7 ~~l~~~l~~~l~~~~-~~~i~~~~~~~~~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 79 (83)
T 1or5_A 7 DDLKKLLAETAGEDD-SVDLAGELDTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTT 79 (83)
T ss_dssp HHHHHHHHHHSCCCS-SCCGGGCSSSCHHHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCc-ccccCCCCCCcHHHhCCCHHHHHHHHHHHHHHHCCccCHHHHhccCCHHHHHHHHHHH
Confidence 568899999999853 4 788 99999999999999999999999999999999998 789999999998654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1392 | ||||
| d1pqwa_ | 183 | c.2.1.1 (A:) Putative enoyl reductase domain of po | 5e-27 | |
| d1gu7a2 | 189 | c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea | 4e-23 | |
| d1qora2 | 179 | c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher | 7e-19 | |
| d2fr1a1 | 259 | c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI | 2e-18 | |
| d1xkta_ | 286 | c.69.1.22 (A:) Fatty acid synthase {Human (Homo sa | 8e-16 | |
| d1xa0a2 | 176 | c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba | 4e-15 | |
| d1mo2a_ | 255 | c.69.1.22 (A:) Erythromycin polyketide synthase {S | 2e-14 | |
| d2pnga1 | 76 | a.28.1.1 (A:1-76) Type I fatty acid synthase ACP d | 3e-14 | |
| d1kola2 | 195 | c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps | 4e-14 | |
| d2jhfa2 | 176 | c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse ( | 6e-14 | |
| d1jmkc_ | 230 | c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillu | 7e-14 | |
| d1h2ba2 | 172 | c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo | 5e-13 | |
| d2fzwa2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 5e-13 | |
| d1iz0a2 | 171 | c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus | 6e-13 | |
| d1yb5a2 | 174 | c.2.1.1 (A:121-294) Quinone oxidoreductase {Human | 6e-13 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 2e-12 | |
| d1v3va2 | 182 | c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd | 2e-12 | |
| d1vj0a2 | 182 | c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T | 4e-12 | |
| d1jqba2 | 174 | c.2.1.1 (A:1140-1313) Bacterial secondary alcohol | 4e-12 | |
| d1tt7a2 | 167 | c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac | 8e-12 | |
| d1f8fa2 | 174 | c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase { | 8e-12 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 1e-11 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 6e-11 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 7e-11 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 1e-10 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 1e-10 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 1e-10 | |
| d1o8ca2 | 77 | c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc | 2e-10 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 2e-10 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 3e-10 | |
| d1cdoa2 | 175 | c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga | 5e-10 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 5e-10 | |
| d1p0fa2 | 174 | c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog | 6e-10 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 8e-10 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 1e-09 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 2e-09 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 3e-09 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 5e-09 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 5e-09 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 5e-09 | |
| d1o89a2 | 177 | c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc | 6e-09 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 7e-09 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 7e-09 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 1e-08 | |
| d1tt7a1 | 162 | b.35.1.2 (A:2-127,A:295-330) Hypothetical protein | 2e-08 | |
| d2h7xa1 | 283 | c.69.1.22 (A:9-291) Picromycin polyketide synthase | 2e-08 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 2e-08 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 2e-08 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 3e-08 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 3e-08 | |
| d1rjwa2 | 168 | c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu | 4e-08 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 4e-08 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 5e-08 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 6e-08 | |
| d1e3ia2 | 174 | c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse ( | 6e-08 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 6e-08 | |
| d1cdoa1 | 199 | b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase | 7e-08 | |
| d1d1ta2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 1e-07 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 1e-07 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 2e-07 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 2e-07 | |
| d1uufa2 | 168 | c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc | 2e-07 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 2e-07 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 5e-07 | |
| d1gu7a1 | 175 | b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu | 5e-07 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 1e-06 | |
| d1vj1a2 | 187 | c.2.1.1 (A:125-311) Putative zinc-binding alcohol | 1e-06 | |
| d2bd0a1 | 240 | c.2.1.2 (A:2-241) Bacterial sepiapterin reductase | 2e-06 | |
| d1kola1 | 201 | b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog | 2e-06 | |
| d1pl8a2 | 171 | c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh | 2e-06 | |
| d1iz0a1 | 131 | b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase | 2e-06 | |
| d1xa0a1 | 152 | b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo | 2e-06 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 3e-06 | |
| d1dhra_ | 236 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 3e-06 | |
| d1llua2 | 166 | c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom | 4e-06 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 5e-06 | |
| d1jvba2 | 170 | c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo | 7e-06 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 8e-06 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 9e-06 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 1e-05 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-05 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 2e-05 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 2e-05 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 2e-05 | |
| d1uaya_ | 241 | c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena | 5e-05 | |
| d2ag5a1 | 245 | c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami | 7e-05 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 1e-04 | |
| d1piwa2 | 168 | c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase | 2e-04 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 2e-04 | |
| d1pl8a1 | 185 | b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor | 2e-04 | |
| d1e3ja1 | 178 | b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor | 3e-04 | |
| d1yb5a1 | 150 | b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas | 5e-04 | |
| d1q7ba_ | 243 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 5e-04 | |
| d1ulua_ | 256 | c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph | 0.001 | |
| d1h2ba1 | 171 | b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas | 0.001 | |
| d1dv5a_ | 80 | a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactob | 0.001 | |
| d1mxha_ | 266 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 0.001 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 0.002 | |
| d2jq4a1 | 83 | a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Ag | 0.002 | |
| d2fzwa1 | 197 | b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase | 0.003 | |
| d1klpa_ | 115 | a.28.1.1 (A:) Acyl carrier protein {Mycobacterium | 0.003 |
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 107 bits (267), Expect = 5e-27
Identities = 64/184 (34%), Positives = 103/184 (55%), Gaps = 4/184 (2%)
Query: 541 EDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTP 600
+AAT Y TA +++ G++ GE +LIH+ +GGVG AA+++A+ + A I+TT G+
Sbjct: 1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD 60
Query: 601 EKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQ 660
R+ + E +G+SR F +++ T G GVD+VLNSLA E +Q V+ LA
Sbjct: 61 ----AKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAP 116
Query: 661 GGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGA 720
GGRF+E+GK D+ + LG+ + SF V LD + L + + + + G
Sbjct: 117 GGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGK 176
Query: 721 VQPL 724
++ L
Sbjct: 177 LEVL 180
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Score = 96.2 bits (238), Expect = 4e-23
Identities = 25/187 (13%), Positives = 56/187 (29%), Gaps = 6/187 (3%)
Query: 539 TLEDAATVPCVYATAVYAMFICGQMQKGESILIH-AGSGGVGQAAINLARYMDAEIFTTV 597
T+ AT+ TA + ++ G+ I G+ VG+ A + + ++ + +
Sbjct: 2 TINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVI 61
Query: 598 GTPEKREFIRKTFPFIKEENIGNSRDTSFEQLV-----MKRTKGRGVDLVLNSLAEEKLQ 652
+ + + + + + + + G L LN + +
Sbjct: 62 RDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSST 121
Query: 653 ASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKAL 712
R L G L G + + + G + +E K S +
Sbjct: 122 GIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQI 181
Query: 713 QKAIDAG 719
+ G
Sbjct: 182 IAWYEEG 188
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Score = 83.5 bits (205), Expect = 7e-19
Identities = 39/181 (21%), Positives = 74/181 (40%), Gaps = 4/181 (2%)
Query: 539 TLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVG 598
+ E AA T Y + +++ E L HA +GGVG A A+ + A++ TVG
Sbjct: 2 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG 61
Query: 599 TPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCL 658
T +K + K + + N R+ + + + T G+ V +V +S+ + + S+ CL
Sbjct: 62 TAQKAQSALKAGAW----QVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCL 117
Query: 659 AQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDA 718
+ G + G A + + + + + + +E L I +
Sbjct: 118 QRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIAS 177
Query: 719 G 719
G
Sbjct: 178 G 178
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 84.7 bits (208), Expect = 2e-18
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Query: 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLI 838
+ ++ GG GG G ++A WL RGA L+L SRSG + ++ + +
Sbjct: 7 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTV 66
Query: 839 STDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
+ D+T V LL P+ +F+ A L D + T E + K +
Sbjct: 67 AACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARN 126
Query: 899 FDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWG 958
+ +R + T FV+FSS + G G Y N+ ++ + + RR++GLP AV WG
Sbjct: 127 LHELTRELDLT--AFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWG 184
Query: 959 AVGEVGLVADMAEDNLE 975
G+ D
Sbjct: 185 TWAGSGMAEGPVADRFR 201
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.5 bits (189), Expect = 8e-16
Identities = 54/265 (20%), Positives = 93/265 (35%), Gaps = 51/265 (19%)
Query: 1150 VEEPVGNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTNPPDTIPEMADSLLPHF 1209
+ + +F+V IEG TV LA ++ Q P D+I +A +
Sbjct: 18 LNSVQSSERPLFLVHPIEGSTTVFHSLASRLSIPTYGLQCTRAAPLDSIHSLAAYYIDCI 77
Query: 1210 KKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTK------------------------ 1245
++ G ++ G+S+G VA E+ +L+ +
Sbjct: 78 RQVQPEGP--YRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPTYVLAYTQSY 135
Query: 1246 -------------------CHLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATH- 1285
D + VL +L L ++ +DL+ +
Sbjct: 136 RAKLTPGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLKGLEERVAAAVDLIIKSHQGL 195
Query: 1286 SRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTE---QALPTAEDYGLSKVCK 1342
R A + Y ++ + +YT + GN+ LLR DY LS+VC
Sbjct: 196 DRQELSFAARSFYYKLRAAEQYTPKAK--YYGNVMLLRAKTGGAYGEDLGADYNLSQVCD 253
Query: 1343 KPVKVHFVDGNHFTVLDNIKSAQII 1367
V VH ++G+H T+L+ II
Sbjct: 254 GKVSVHVIEGDHRTLLEGSGLESII 278
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Score = 72.6 bits (177), Expect = 4e-15
Identities = 23/168 (13%), Positives = 55/168 (32%), Gaps = 9/168 (5%)
Query: 539 TLEDAATVPCVYATA---VYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFT 595
TL++A + TA ++ + G + +L+ +GGVG A+++ +
Sbjct: 2 TLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEA 61
Query: 596 TVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASV 655
+ G + +++R +R+ + + + ++ + L +
Sbjct: 62 STGKAAEHDYLRVLGAKEV-----LAREDVMAERIRP-LDKQRWAAAVDPVGGRTLATVL 115
Query: 656 RCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQE 703
+ GG G A +R S G+ +
Sbjct: 116 SRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRL 163
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 72.5 bits (177), Expect = 2e-14
Identities = 38/210 (18%), Positives = 64/210 (30%), Gaps = 23/210 (10%)
Query: 1159 TIFMVPGIEGIATVLE--PLAKNINAQVLVF------QFDHTNPPDTIPEMADSLLPHFK 1210
T+ G I+ E LA + V + P ++ +A
Sbjct: 44 TVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPLPSSMAAVAAVQADAVI 103
Query: 1211 KRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTK-CHLYLVDSAPDYVLTSLRKLPDWN 1269
+ + G S G ++A LA +L G + L+D P + W
Sbjct: 104 RTQGDK--PFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYP---PGHQDAMNAWL 158
Query: 1270 AKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQAL 1329
+L + + T R A AY R+T + + G L+ E +
Sbjct: 159 EEL---TATLFDRETVRMDDTRLTALGAYDRLTG-----QWRPRETGLPTLLVSAGE-PM 209
Query: 1330 PTAEDYGLSKVCKKPVKVHFVDGNHFTVLD 1359
D V G+HFT++
Sbjct: 210 GPWPDDSWKPTWPFEHDTVAVPGDHFTMVQ 239
|
| >d2pnga1 a.28.1.1 (A:1-76) Type I fatty acid synthase ACP domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Type I fatty acid synthase ACP domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 66.8 bits (163), Expect = 3e-14
Identities = 35/73 (47%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 1015 GSGGA-TNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQD 1073
G G A ++V AV +ILG+RDL ++L S+LA+LG+DS+M VE++Q LERE ++ L ++
Sbjct: 1 GDGEAQRDLVKAVAHILGIRDLAGINLDSSLADLGLDSLMGVEVRQILEREHDLVLPIRE 60
Query: 1074 IRGLTFAKLQDIA 1086
+R LT KLQ+++
Sbjct: 61 VRQLTLRKLQEMS 73
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Score = 70.3 bits (171), Expect = 4e-14
Identities = 27/171 (15%), Positives = 53/171 (30%), Gaps = 21/171 (12%)
Query: 540 LEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599
+ D + + T + G + G ++ + G+G VG AA AR + A +
Sbjct: 1 IRDLTCLSDILPTGYHGAVTAG-VGPGSTVYVA-GAGPVGLAAAASARLLGAAVVIVGDL 58
Query: 600 PEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEK--------- 650
R K F E S DT + + VD ++++ E
Sbjct: 59 NPARLAHAKAQGF---EIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAK 115
Query: 651 -------LQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVML 694
L + ++ G+ G + + + + S +
Sbjct: 116 HEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLG 166
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Score = 69.2 bits (168), Expect = 6e-14
Identities = 21/158 (13%), Positives = 47/158 (29%), Gaps = 1/158 (0%)
Query: 540 LEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599
LE + C ++T + ++ +G + + G + A I
Sbjct: 3 LEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDIN 62
Query: 600 PEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLA 659
+K K + N + + E L G + + + A C
Sbjct: 63 KDKFAKA-KEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE 121
Query: 660 QGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNF 697
G + +G + N + + + ++ G + F
Sbjct: 122 AYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGF 159
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Score = 70.5 bits (171), Expect = 7e-14
Identities = 27/206 (13%), Positives = 57/206 (27%), Gaps = 8/206 (3%)
Query: 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTNPPDTIPEMADSLLPHFKKRLV 1214
IF P + G + + L+ + + L + D +K +
Sbjct: 15 DQEQIIFAFPPVLGYGLMYQNLSSRLPSYKLCAFDFIE-----EEDRLDRYADLIQK--L 67
Query: 1215 HGTDEIKLVGFSFGGMVALELAIKLEQLGTKCHLYLVDSAPDYVLTSLRKLPDWNAKLNY 1274
+ L G+S G +A E A KLE G ++ + S + +
Sbjct: 68 QPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEA 127
Query: 1275 FLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQALPTAED 1334
+++ ++ + ++ S +I LL
Sbjct: 128 LMNVNRDNEALNSEAVKHGLKQKTHAFYSY-YVNLISTGQVKADIDLLTSGADFDIPEWL 186
Query: 1335 YGLSKVCKKPVKVHFVDGNHFTVLDN 1360
+ ++ G H +L
Sbjct: 187 ASWEEATTGAYRMKRGFGTHAEMLQG 212
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Score = 66.5 bits (161), Expect = 5e-13
Identities = 28/155 (18%), Positives = 64/155 (41%), Gaps = 7/155 (4%)
Query: 540 LEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599
L + A + TA A+ + + + G GG+G A+ L + M +
Sbjct: 6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDV 65
Query: 600 PEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLA-EEKLQASVRCL 658
E++ + + +++ ++R +Q++ +GRGV++ ++ + + + + L
Sbjct: 66 KEEKLKLAERLGA---DHVVDARRDPVKQVMELT-RGRGVNVAMDFVGSQATVDYTPYLL 121
Query: 659 AQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVM 693
+ GR + +G + V E SF G +
Sbjct: 122 GRMGRLIIVGYGGELRFPT--IRVISSEVSFEGSL 154
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 66.5 bits (161), Expect = 5e-13
Identities = 20/156 (12%), Positives = 42/156 (26%), Gaps = 5/156 (3%)
Query: 540 LEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599
L+ + C +T A +++ G + G + + I
Sbjct: 3 LDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDIN 62
Query: 600 PEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLA 659
+K ++ F E I + Q V+ GVD + K+ +
Sbjct: 63 KDKFARAKE---FGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEAC 119
Query: 660 QGGRFLE--IGKFDLANNNMLGMEVFMRETSFHGVM 693
G + +G + ++ G
Sbjct: 120 HKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTA 155
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Score = 66.2 bits (160), Expect = 6e-13
Identities = 39/181 (21%), Positives = 71/181 (39%), Gaps = 12/181 (6%)
Query: 539 TLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVG 598
+ E+AA P + TA A+ Q + GE +L+ A +G +G AA+ +AR M +
Sbjct: 2 SPEEAAAFPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS 60
Query: 599 TPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCL 658
PEK + + V +R K G ++ + ++++ S+ L
Sbjct: 61 RPEKLALPLALGAE----------EAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGLL 110
Query: 659 AQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDA 718
A GGR + IG + + + + R + G L + +L L +
Sbjct: 111 AHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGF-LLPRLGR 169
Query: 719 G 719
Sbjct: 170 E 170
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.2 bits (160), Expect = 6e-13
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 9/181 (4%)
Query: 539 TLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVG 598
+ A + Y TA A+ ++ GES+L+H SGGVG AA +AR +I
Sbjct: 2 DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKIL---- 57
Query: 599 TPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCL 658
E +K + N R+ ++ + K +G+D+++ LA L + L
Sbjct: 58 GTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLL 117
Query: 659 AQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDA 718
+ GGR + +G N + +E+S GV L F + +E ALQ ++
Sbjct: 118 SHGGRVIVVGSRGTIEINP--RDTMAKESSIIGVTL---FSSTKEEFQQYAAALQAGMEI 172
Query: 719 G 719
G
Sbjct: 173 G 173
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 66.8 bits (163), Expect = 2e-12
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 17/185 (9%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+K +I GG G G +A+ + GA + + A+R + +VL
Sbjct: 4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIR-----NLGRRVLTV 57
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D++ V + + G D + N A + F+ T E + + ++
Sbjct: 58 KCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFL 117
Query: 899 FDKYSRTMCPT--LGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVE 956
K G+ + +S + T+Y + A LA +
Sbjct: 118 MAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRA--------LASD 169
Query: 957 WGAVG 961
G G
Sbjct: 170 LGKDG 174
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Score = 64.7 bits (156), Expect = 2e-12
Identities = 30/192 (15%), Positives = 71/192 (36%), Gaps = 16/192 (8%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
+P L T+ TA + + ++ GE++L+ A +G VG +A+ ++
Sbjct: 1 LPLSLAL---GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKV 57
Query: 594 FTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQA 653
G+ EK ++++ N + + + +K+ G D +++ E L
Sbjct: 58 VGAAGSDEKIAYLKQIGFD----AAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNT 113
Query: 654 SVRCLAQGGRFLEIGKFDLANNNM------LGMEVFMRETSFHGVMLDNFFFAEQEWKMS 707
+ + G+ G + N + ++ G ++ + +E +
Sbjct: 114 VLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKAL- 172
Query: 708 LQKALQKAIDAG 719
+ L K + G
Sbjct: 173 --RDLMKWVLEG 182
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Score = 64.2 bits (155), Expect = 4e-12
Identities = 33/165 (20%), Positives = 61/165 (36%), Gaps = 12/165 (7%)
Query: 540 LEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599
L+ A C ATA +A + G++++I G+G +G + +AR + AE +
Sbjct: 3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQ-GAGPLGLFGVVIARSLGAENVIVIAG 61
Query: 600 PEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSL-AEEKLQASVRCL 658
R + + N + + +M T GRG D +L + L L
Sbjct: 62 SPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELL 121
Query: 659 AQGGRFLEIG------KFDLANNNMLGMEVFMRETSFHGVMLDNF 697
+GG + G L ++ +F G+ + +
Sbjct: 122 RRGGFYSVAGVAVPQDPVPFKVYEWL----VLKNATFKGIWVSDT 162
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Score = 64.2 bits (155), Expect = 4e-12
Identities = 36/158 (22%), Positives = 60/158 (37%), Gaps = 9/158 (5%)
Query: 540 LEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599
LE+A + + T + + ++ G S+++ G G VG I A+ A VG+
Sbjct: 3 LENAVMITDMMTTGFHGAEL-ADIEMGSSVVVI-GIGAVGLMGIAGAKLRGAGRIIGVGS 60
Query: 600 PEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSL-AEEKLQASVRCL 658
K + N ++ E VMK T G+GVD V+ + E L +V+ +
Sbjct: 61 RPICVEAAKFYGATDILNY---KNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMV 117
Query: 659 AQGGRFLEIGKF---DLANNNMLGMEVFMRETSFHGVM 693
GG I D + M + G +
Sbjct: 118 KPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGL 155
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Score = 63.1 bits (152), Expect = 8e-12
Identities = 21/144 (14%), Positives = 53/144 (36%), Gaps = 6/144 (4%)
Query: 551 ATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTF 610
A +V+ + G + S+L+ +GGVG A+++ ++ + G E +++++
Sbjct: 9 ALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLG 68
Query: 611 PFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKF 670
+ + D +K + ++ + ++L + + + GG G
Sbjct: 69 A----SEVISRED--VYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLT 122
Query: 671 DLANNNMLGMEVFMRETSFHGVML 694
+R S G+
Sbjct: 123 GGGEVPATVYPFILRGVSLLGIDS 146
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 63.0 bits (152), Expect = 8e-12
Identities = 29/159 (18%), Positives = 57/159 (35%), Gaps = 5/159 (3%)
Query: 540 LEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599
+E + C T A ++ S + G VG +A+ A+ A I V
Sbjct: 3 IELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDI 61
Query: 600 PEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLA 659
E R + K ++ NS+ + + T G + ++ + E L+ V L
Sbjct: 62 VESRLELAKQLGA---THVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALG 118
Query: 660 QGGRFLEIGKFDLANNNMLGM-EVFMRETSFHGVMLDNF 697
G+ +G L + ++ + + GV+ +
Sbjct: 119 ILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSG 157
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 64.6 bits (157), Expect = 1e-11
Identities = 36/189 (19%), Positives = 64/189 (33%), Gaps = 16/189 (8%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ K II G G G A GA K+ +T R + +I + V
Sbjct: 4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSV 62
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVL----KDALFENQTPEDFNASLGPKAN 894
D+TT+AG +L+ K G +D + N A + Q+ E ++A+L
Sbjct: 63 VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 122
Query: 895 ATKYFDKYSRTMCPTLG--QFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPG 952
+ K + + + S S Y +A + +++
Sbjct: 123 SVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRN-------- 174
Query: 953 LAVEWGAVG 961
A++ G
Sbjct: 175 TAIDLIQHG 183
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.3 bits (151), Expect = 6e-11
Identities = 35/219 (15%), Positives = 77/219 (35%), Gaps = 16/219 (7%)
Query: 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIST 840
++ ++ G GG G +A LV +G K+V +R+ V N + Y ++
Sbjct: 10 DRLALVTGASGGIGAAVARALVQQGL-KVVGCART-VGNIEELAAECKSAGYPGTLIPYR 67
Query: 841 DDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPED----FNASLGPKANA 895
D++ E ++++ + ++ VD N A + + + + FN ++ +
Sbjct: 68 CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSIC 127
Query: 896 TKYFDKYSRTMCPTLGQFVVFSSVS--CGRGNAGQTNYGMANSIMERICEARRAEGLPG- 952
T+ + + G + +S+S + Y + + E R E
Sbjct: 128 TREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQ 187
Query: 953 -----LAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRI 986
+ G V E + + + E Q +
Sbjct: 188 THIRATCISPGVV-ETQFAFKLHDKDPEKAAATYEQMKC 225
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 61.8 bits (150), Expect = 7e-11
Identities = 32/185 (17%), Positives = 57/185 (30%), Gaps = 21/185 (11%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ K ++ GG G G +A GA + R K +A+ QV
Sbjct: 4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAF-----FQV--- 55
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+ E V + EA LG VD + N A + ++ L A +
Sbjct: 56 --DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMH 113
Query: 899 FDKYSRTMCPTLGQFVVF--SSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVE 956
+ +G + +SV Y + + + + LA++
Sbjct: 114 LSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRS--------LALD 165
Query: 957 WGAVG 961
+
Sbjct: 166 LAPLR 170
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 61.5 bits (149), Expect = 1e-10
Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 17/184 (9%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K ++ GG G GLE+ L+ GA K+ + + +A ++ + +
Sbjct: 5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDIN------EAAGQQLAAELGERSMFV 57
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+++EA ++ +LG ++ + N A +L E EDF+ L +
Sbjct: 58 RHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFI 117
Query: 899 FDKYS-RTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEW 957
+ M T G + +SVS Y + + + + A A+
Sbjct: 118 GCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRA--------AALSC 169
Query: 958 GAVG 961
G
Sbjct: 170 RKQG 173
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 61.6 bits (149), Expect = 1e-10
Identities = 40/195 (20%), Positives = 67/195 (34%), Gaps = 19/195 (9%)
Query: 774 PRYYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYD 833
PR+ SNK+ II G G G A GA + +T RS + I +
Sbjct: 1 PRF---SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSE 56
Query: 834 VQVLISTDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFEN----QTPEDFNAS 888
QV D+TTE G ++ + G +D + N A F Q + ++ +
Sbjct: 57 KQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKT 116
Query: 889 LGPKANATKYFDKYSRTMCPTL--GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARR 946
L A K + V S V+ + Y +A + +++ +
Sbjct: 117 LKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRS-- 174
Query: 947 AEGLPGLAVEWGAVG 961
A++ G
Sbjct: 175 ------TAIDLAKFG 183
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 61.3 bits (148), Expect = 1e-10
Identities = 41/221 (18%), Positives = 69/221 (31%), Gaps = 17/221 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
NK+ I+ GG G GL + GA + + RS + K+ K + V+
Sbjct: 8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADA--VEVTEKVGKEFGVKTKAY 64
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D++ V + + LGP+ G+ A V T EDF
Sbjct: 65 QCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFN 124
Query: 899 FDKYS--RTMCPTLGQFVVFSSVSCG--------RGNAGQTNYGMANSIMERICEARRAE 948
+ + +V +S G+ Q Y + + + + AE
Sbjct: 125 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 184
Query: 949 GLP-GLAVEWGAVGEV--GLVADMAEDNLEVVIGGTLQQRI 986
G+ V + G V A M + + R
Sbjct: 185 WASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRF 225
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Score = 56.1 bits (135), Expect = 2e-10
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Query: 539 TLEDAATVPCVYATA---VYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFT 595
A + TA V A+ G + I++ SGGVG A+ L + ++
Sbjct: 2 DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVA 61
Query: 596 TVGTPEKREFIRK 608
G E+++
Sbjct: 62 VSGRESTHEYLKS 74
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.2 bits (148), Expect = 2e-10
Identities = 36/186 (19%), Positives = 71/186 (38%), Gaps = 13/186 (6%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRS--GVKNGYQALRIKIWKSYDVQVL 837
+ I+ GG G G + L+ G+ +V+ SR +K+ L+ + + +V+
Sbjct: 11 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVI 69
Query: 838 ISTDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANAT 896
+I E V NL+ + G ++ + N + E+ + + ++A L T
Sbjct: 70 PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGT 129
Query: 897 KYFDKYSRTMCPTLGQ-FVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAV 955
Y K + +V V G + G A + + + ++ LA+
Sbjct: 130 FYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKS--------LAL 181
Query: 956 EWGAVG 961
EW G
Sbjct: 182 EWACSG 187
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 60.4 bits (146), Expect = 3e-10
Identities = 46/252 (18%), Positives = 79/252 (31%), Gaps = 25/252 (9%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+NK+ I LGG GL+ + LV R + V+ R AL + V +
Sbjct: 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRV---ENPTALAELKAINPKVNITFH 60
Query: 840 TDDITTEAGVVNLLTEA--NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATK 897
T D+T L + ++L VD + N A +L D E +F + N T
Sbjct: 61 TYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLV----NTTT 116
Query: 898 YFDKYSRTMCPTLGQFVVF-SSVSCGRGNAGQTNYGMA----NSIMERICEARRAEGLPG 952
+ G + SV+ Y + S + + G+
Sbjct: 117 AILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTA 176
Query: 953 LAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPIVASMVVAEK 1012
++ G + + ++E + L Q+ V
Sbjct: 177 YSINPGITRTPLVHTFNSWLDVEPRVAELLLSH-----------PTQTSEQCGQNFVKAI 225
Query: 1013 KAGSGGATNIVD 1024
+A GA +D
Sbjct: 226 EANKNGAIWKLD 237
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 58.1 bits (139), Expect = 5e-10
Identities = 20/159 (12%), Positives = 50/159 (31%), Gaps = 4/159 (2%)
Query: 540 LEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599
L+ + C +T A +++ G + + A + I
Sbjct: 3 LDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLN 62
Query: 600 PEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKL-QASVRCL 658
P+K E + F + + + + V+ + GVD L + + + ++
Sbjct: 63 PDKFEKAKV---FGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESC 119
Query: 659 AQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNF 697
+G + + ++ + ++ G M F
Sbjct: 120 LKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGF 158
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 59.2 bits (143), Expect = 5e-10
Identities = 36/185 (19%), Positives = 58/185 (31%), Gaps = 22/185 (11%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
S ++ G G G + L GA K+V +R+ + +L + V V
Sbjct: 4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRT--NSDLVSLAKECPGIEPVCV--- 57
Query: 840 TDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYF 899
D+ L +GPVD + N A ++ F T E F+ S +
Sbjct: 58 --DLGDWDATEKAL---GGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQV 112
Query: 900 DKY---SRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVE 956
+ G V SS+ Y M + +A +A+E
Sbjct: 113 SQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKA--------MAME 164
Query: 957 WGAVG 961
G
Sbjct: 165 LGPHK 169
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 57.6 bits (138), Expect = 6e-10
Identities = 30/154 (19%), Positives = 55/154 (35%), Gaps = 5/154 (3%)
Query: 542 DAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPE 601
++ + C +AT A ++ G + + G GGVG +AI + A VGT +
Sbjct: 4 ESCLIGCGFATGYGAAVNTAKVTPGSTCAVF-GLGGVGFSAIVGCKAAGASRIIGVGTHK 62
Query: 602 KREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVL--NSLAEEKLQASVRCLA 659
+ + N D +++ ++T G GVD + E + A
Sbjct: 63 DKFPKAIELGATECLN-PKDYDKPIYEVICEKTNG-GVDYAVECAGRIETMMNALQSTYC 120
Query: 660 QGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVM 693
G + +G L + + S G +
Sbjct: 121 GSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSV 154
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 58.5 bits (141), Expect = 8e-10
Identities = 45/222 (20%), Positives = 72/222 (32%), Gaps = 34/222 (15%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRS--GVKNGYQALRIKIWKSYDVQVL 837
+K+ +I G G G + GA +LV ++ +A+
Sbjct: 4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVM------ 56
Query: 838 ISTDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANAT 896
D+ A V EA LG +DG+ + A + +D ED+ L +
Sbjct: 57 ----DVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGS 112
Query: 897 KYF-DKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAV 955
S M +V ++ GN GQ NY + + + + LA+
Sbjct: 113 FLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRT--------LAL 164
Query: 956 EWGAVG-----------EVGLVADMAEDNLEVVIGGTLQQRI 986
E G G E + A + E E I T R
Sbjct: 165 ELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRA 206
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 58.5 bits (141), Expect = 1e-09
Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 14/187 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
S KS II G G G A GA ++ +T R+ + +I ++
Sbjct: 3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAV 61
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLA--VVLKDALFENQTPEDFNASLGPKANAT 896
D+T +G +++ K G +D + N A + +Q E + + A
Sbjct: 62 VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 121
Query: 897 KYFDKYSRTMCPTLGQFV--VFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLA 954
+ ++ + V S V+ + ++G Y A + +++ A
Sbjct: 122 IEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRC--------TA 173
Query: 955 VEWGAVG 961
++ G
Sbjct: 174 IDLIQHG 180
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 57.8 bits (139), Expect = 2e-09
Identities = 45/186 (24%), Positives = 70/186 (37%), Gaps = 14/186 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+++ +I GG G G A L GA KL L S + + D +VL +
Sbjct: 3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLE-TAPDAEVLTT 60
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLA-VVLKDALFENQTPEDFNASLGPKANATK 897
D++ EA V +T + G +DG FN A + K E+ T +F+ +
Sbjct: 61 VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 120
Query: 898 YFDKYSRTMCPTL--GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAV 955
+ + G V +SV RG Q+ Y A + + AV
Sbjct: 121 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRN--------SAV 172
Query: 956 EWGAVG 961
E+G G
Sbjct: 173 EYGRYG 178
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.3 bits (138), Expect = 3e-09
Identities = 33/183 (18%), Positives = 65/183 (35%), Gaps = 14/183 (7%)
Query: 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIST 840
K ++ G G G A+ L+L+GA K+ L + ++ G Q + + L
Sbjct: 3 GKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWN-LEAGVQCKAALHEQFEPQKTLFIQ 60
Query: 841 DDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYF 899
D+ + + + + + G +D + N A V + +E + + + + T
Sbjct: 61 CDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVI----SGTYLG 116
Query: 900 DKY-SRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWG 958
Y S+ G + SS++ A Q Y + + + LA
Sbjct: 117 LDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRS------AALAANLM 170
Query: 959 AVG 961
G
Sbjct: 171 NSG 173
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 56.2 bits (135), Expect = 5e-09
Identities = 34/186 (18%), Positives = 60/186 (32%), Gaps = 15/186 (8%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ ++ GG G G +A L G +V+ SR+ + K+ + Y V+ +
Sbjct: 4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEA--SEAAQKLTEKYGVETMAF 60
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D++ V LL K G +D + N A + + E ++F
Sbjct: 61 RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEF--------RQVIE 112
Query: 899 FDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLP---GLAV 955
+ + ++ S + N G A + LA
Sbjct: 113 VNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAK 172
Query: 956 EWGAVG 961
EWG G
Sbjct: 173 EWGRYG 178
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.1 bits (135), Expect = 5e-09
Identities = 30/191 (15%), Positives = 54/191 (28%), Gaps = 21/191 (10%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ + +I G G G A ++ LVL + K+G + K K +V
Sbjct: 6 TGEIVLITGAGHGIGRLTAYEFAKLKSK-LVLWDIN--KHGLEETAAKC-KGLGAKVHTF 61
Query: 840 TDDITTEAGVVNLLTE-ANKLGPVDGIFNLAVVLKDALFENQTPEDFNASL-----GPKA 893
D + + + + ++G V + N A V+ + +
Sbjct: 62 VVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAH-F 120
Query: 894 NATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGL 953
TK F G V +S + Y + + L
Sbjct: 121 WTTKAFLPAMTKNNH--GHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKT--------L 170
Query: 954 AVEWGAVGEVG 964
E A+ G
Sbjct: 171 TDELAALQITG 181
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 56.3 bits (135), Expect = 5e-09
Identities = 37/186 (19%), Positives = 63/186 (33%), Gaps = 15/186 (8%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K +I G G G +A A K+V+ RS L + K + +
Sbjct: 6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVL--EEIKKVGGEAIAV 62
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+T E+ V+NL+ A + G +D + N A + + D+N +
Sbjct: 63 KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFL 122
Query: 899 FDKY---SRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAV 955
+ G + SSV +Y + M+ + E LA+
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTET--------LAL 174
Query: 956 EWGAVG 961
E+ G
Sbjct: 175 EYAPKG 180
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Score = 54.5 bits (130), Expect = 6e-09
Identities = 27/168 (16%), Positives = 52/168 (30%), Gaps = 11/168 (6%)
Query: 539 TLEDAATVPCVYATA---VYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFT 595
A + TA V A+ G + I++ SGGVG A+ L + ++
Sbjct: 2 DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVA 61
Query: 596 TVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASV 655
G E+++ + + + + + K+ +D V ++ L +
Sbjct: 62 VSGRESTHEYLKSLGA----SRVLPRDEFAESRPLEKQVWAGAIDTV----GDKVLAKVL 113
Query: 656 RCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFAEQE 703
+ GG G M +R GV +
Sbjct: 114 AQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRA 161
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 56.2 bits (135), Expect = 7e-09
Identities = 29/186 (15%), Positives = 65/186 (34%), Gaps = 16/186 (8%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K+ ++ GG G G + + GA + +R+ + + + QV S
Sbjct: 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAV-IHTCARNEYELNECLSKWQ---KKGFQVTGS 62
Query: 840 TDDITTEAGVVNLLTEANKL--GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATK 897
D + L+ + + G +D + N ++ + T EDF+ + +
Sbjct: 63 VCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAY 122
Query: 898 YFDKYSRTMCPTLGQFVVF--SSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAV 955
+ + + + G + SS++ + + Y + ++ LA
Sbjct: 123 HLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARN--------LAC 174
Query: 956 EWGAVG 961
EW + G
Sbjct: 175 EWASDG 180
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 56.5 bits (136), Expect = 7e-09
Identities = 38/184 (20%), Positives = 63/184 (34%), Gaps = 19/184 (10%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGY-------QALRIKIWKSY 832
+ ++ G GG G A RGA +V+ G G + +I +
Sbjct: 6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 64
Query: 833 DVQVLISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPK 892
V E V L + G +D + N A +L+D F + ED++
Sbjct: 65 GKAVANYDSVEAGEKLVKTAL---DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVH 121
Query: 893 ANATKYFDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRA 947
+ +R + G+ ++ +S S GN GQ NY A + +
Sbjct: 122 LRGSFQV---TRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVI 178
Query: 948 EGLP 951
EG
Sbjct: 179 EGRK 182
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.9 bits (132), Expect = 1e-08
Identities = 37/185 (20%), Positives = 70/185 (37%), Gaps = 19/185 (10%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ K ++ GG G G + V GA ++V+ + ++G +AL ++ + +
Sbjct: 5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKD--ESGGRALEQELPGAVFILC--- 58
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATK 897
D+T E V L++E + G +D + N A E + + F L T
Sbjct: 59 --DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTY 116
Query: 898 YFDKYS-RTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVE 956
K + + + G + SS+ G A Y + + +A LA++
Sbjct: 117 TLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKA--------LALD 168
Query: 957 WGAVG 961
G
Sbjct: 169 ESPYG 173
|
| >d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Score = 53.3 bits (127), Expect = 2e-08
Identities = 8/61 (13%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Query: 518 RSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGG 577
L+ + +P +L++A + + + + IL + G
Sbjct: 99 GGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVD-REVSLEETPGALKDILQNRIQGR 157
Query: 578 V 578
V
Sbjct: 158 V 158
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Score = 55.3 bits (132), Expect = 2e-08
Identities = 37/217 (17%), Positives = 63/217 (29%), Gaps = 29/217 (13%)
Query: 1159 TIFMVPGIEGIATVLE--PLAKNINAQVLVFQFD-----------HTNPPDTIPEMADSL 1205
+ G E L+ + + P + D+
Sbjct: 62 VLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQ 121
Query: 1206 LPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKC--HLYLVDSAPDYVLTSLR 1263
+ G + L+G S G ++A ELA +LE+ + LVD P +
Sbjct: 122 ARAILRAA--GDAPVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIE 179
Query: 1264 KLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLR 1323
+ + + R LA Y R P+ + L+R
Sbjct: 180 VWSRQ------LGEGLFAGELEPMSDARLLAMGRYARF-----LAGPRPGRSSAPVLLVR 228
Query: 1324 PTEQALPTAEDY-GLSKVCKKPVKVHFVDGNHFTVLD 1359
+E E+ P V V G+HFT++
Sbjct: 229 ASEPLGDWQEERGDWRAHWDLPHTVADVPGDHFTMMR 265
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 54.7 bits (131), Expect = 2e-08
Identities = 34/194 (17%), Positives = 65/194 (33%), Gaps = 20/194 (10%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
++ +I GG G G L D V GA K+ + +S + L ++ + VL
Sbjct: 4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSA-----ERLA-ELETDHGDNVLGI 56
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPED---------FNASL 889
D+ + + + G +D + A + + PE+ F+ ++
Sbjct: 57 VGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINV 116
Query: 890 GPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEG 949
+A K + + G + S + N G Y A + + E
Sbjct: 117 KGYIHAVKACLPA---LVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFEL 173
Query: 950 LPGLAVEWGAVGEV 963
P + V G +
Sbjct: 174 APYVRVNGVGSGGI 187
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 54.2 bits (130), Expect = 2e-08
Identities = 33/177 (18%), Positives = 59/177 (33%), Gaps = 9/177 (5%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K II GG G GL +A V GA K+++T R + + +Q
Sbjct: 5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVG--EKAAKSVGTPDQIQFF-- 59
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D + E G L GPV + N A + + E T ++ L + +
Sbjct: 60 QHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFF 119
Query: 899 FDKYS-RTMCPTL--GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPG 952
+ + M + SS+ G+ Y + + + ++ +
Sbjct: 120 GTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALK 176
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 54.0 bits (129), Expect = 3e-08
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 17/187 (9%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K ++ G G GL +A L +GA +VL + +R + + V+VL
Sbjct: 3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEI-EKVRAGLAAQHGVKVLYD 60
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D++ V L+ A ++G +D + N A + AL E+ E ++A N +
Sbjct: 61 GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAI--LALNLSAV 118
Query: 899 FDKYSRTMCPTL----GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLA 954
F + + G+ + +S +A ++ Y A + + A
Sbjct: 119 FHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKV--------TA 170
Query: 955 VEWGAVG 961
+E G
Sbjct: 171 LETAGQG 177
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 54.0 bits (129), Expect = 3e-08
Identities = 25/184 (13%), Positives = 63/184 (34%), Gaps = 13/184 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K ++ G G G E+A L RG K+++ + ++ + + K
Sbjct: 17 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVV--AAIKKNGSDAACV 73
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
++ +V + EA G +D + + + V+ ++ TPE+F+ +
Sbjct: 74 KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFF 133
Query: 899 FDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY-GMANSIMERICEARRAEGLPGLAVEW 957
+ + G+ ++ S++ + + +E +A++
Sbjct: 134 VAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARC--------MAIDM 185
Query: 958 GAVG 961
Sbjct: 186 ADKK 189
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Score = 52.4 bits (124), Expect = 4e-08
Identities = 24/155 (15%), Positives = 56/155 (36%), Gaps = 8/155 (5%)
Query: 539 TLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVG 598
+ E+AA + C T A+ + G + GE + I+ G A A+ M +
Sbjct: 2 SFEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIYGIGGLGHVAVQY-AKAMGLNVVAVDI 59
Query: 599 TPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCL 658
EK E ++ + + + ++ G V+ ++++ Q++ +
Sbjct: 60 GDEKLELAKELGADLVVNP----LKEDAAKFMKEKVGG-VHAAVVTAVSKPAFQSAYNSI 114
Query: 659 AQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVM 693
+GG + +G + + + G +
Sbjct: 115 RRGGACVLVGLPPEEMPIPI-FDTVLNGIKIIGSI 148
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 53.6 bits (128), Expect = 4e-08
Identities = 39/184 (21%), Positives = 68/184 (36%), Gaps = 13/184 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ K + G G G +A L RGA +V+ S K + + K Q +
Sbjct: 5 AGKVALTTGAGRGIGRGIAIELGRRGAS-VVVNYGSSSKAAEEVV--AELKKLGAQGVAI 61
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
DI+ + VV L +A + G +D + + + + T E F+ +
Sbjct: 62 QADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFF 121
Query: 899 FDKYSRTMCPTLGQFVVFSSVSCGR-GNAGQTNYGMANSIMERICEARRAEGLPGLAVEW 957
+ C G+ ++ SS++ G Y + + +E C A AV+
Sbjct: 122 VAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRA--------FAVDC 173
Query: 958 GAVG 961
GA G
Sbjct: 174 GAKG 177
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 54.0 bits (129), Expect = 5e-08
Identities = 36/186 (19%), Positives = 62/186 (33%), Gaps = 15/186 (8%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K I GG G G + L GA+ V+ SR + +A +I +V
Sbjct: 24 QGKVAFITGGGTGLGKGMTTLLSSLGAQ-CVIASRK--MDVLKATAEQISSQTGNKVHAI 80
Query: 840 TDDITTEAGVVNLLTE-ANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+ V N ++E G + + N A + E +P + N T +
Sbjct: 81 QCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAF 140
Query: 899 FDKYSRTMCP---TLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAV 955
F+ +++ G+ A + +E + ++ LA
Sbjct: 141 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKS--------LAA 192
Query: 956 EWGAVG 961
EWG G
Sbjct: 193 EWGKYG 198
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 53.2 bits (127), Expect = 6e-08
Identities = 39/219 (17%), Positives = 71/219 (32%), Gaps = 28/219 (12%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
S K+ ++ G G G D GA LV R + L + + + + +
Sbjct: 4 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDRE------ERLLAEAVAALEAEAIAV 56
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D++ V + EA + G + G+ + A V AL N E + L +
Sbjct: 57 VADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFL 116
Query: 899 FDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWG 958
+ + + G +V + G G G +Y + + LA+E
Sbjct: 117 VARKAGEVLEE-GGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLART--------LALELA 167
Query: 959 AVG-----------EVGLVADMAEDNLEVVIGGTLQQRI 986
G + + A + E +G + R
Sbjct: 168 RKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRA 206
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 51.9 bits (123), Expect = 6e-08
Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 4/149 (2%)
Query: 540 LEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599
LE + C +++ A ++ G + + G G VG +AI + A +
Sbjct: 3 LERVCLIGCGFSSGYGAAINTAKVTPGSTCAVF-GLGCVGLSAIIGCKIAGASRIIAIDI 61
Query: 600 PEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVL-NSLAEEKLQASVRCL 658
++ K N + + GVD L + + L+A+V C
Sbjct: 62 NGEKFPKAKALGATDCLNPRELDKPVQDV--ITELTAGGVDYSLDCAGTAQTLKAAVDCT 119
Query: 659 AQGGRFLEIGKFDLANNNMLGMEVFMRET 687
G + + + ++V + +
Sbjct: 120 VLGWGSCTVVGAKVDEMTIPTVDVILGRS 148
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 53.3 bits (127), Expect = 6e-08
Identities = 36/249 (14%), Positives = 77/249 (30%), Gaps = 31/249 (12%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ K ++ G G GL A L G + L + + + + + V+
Sbjct: 4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMN--REALEKAEASV-REKGVEARSY 59
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQT-PEDFNA--SLGPKANA 895
D+T+E V+ + G +D +FN A +DF ++
Sbjct: 60 VCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAF 119
Query: 896 TKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAV 955
+ + G+ V +S++ +G YG + + + E A+
Sbjct: 120 HVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTET--------AAL 171
Query: 956 EWGAVG------EVGLVA-DMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEPI----- 1003
+ G + + + Q S + + + +I S P+
Sbjct: 172 DLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGD 231
Query: 1004 ---VASMVV 1009
+ +V
Sbjct: 232 INEIPGVVA 240
|
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 52.2 bits (124), Expect = 7e-08
Identities = 8/86 (9%), Positives = 25/86 (29%)
Query: 486 ESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAAT 545
+ + R G++V+ + + + +I L++ T
Sbjct: 113 VKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFIT 172
Query: 546 VPCVYATAVYAMFICGQMQKGESILI 571
+ A+ + + ++L
Sbjct: 173 HRMPLESVNDAIDLMKHGKCIRTVLS 198
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 51.0 bits (121), Expect = 1e-07
Identities = 25/156 (16%), Positives = 49/156 (31%), Gaps = 5/156 (3%)
Query: 540 LEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599
E + C ++T A G+++ G + ++ G GGVG + I + A +
Sbjct: 4 PEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVF-GLGGVGLSVIMGCKSAGASRIIGIDL 62
Query: 600 PEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEK--LQASVRC 657
+ + E I T V+ G V + + + A C
Sbjct: 63 NKDKFEKAM--AVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASC 120
Query: 658 LAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVM 693
G + +G A + ++ G +
Sbjct: 121 HMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCV 156
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 52.3 bits (125), Expect = 1e-07
Identities = 36/184 (19%), Positives = 74/184 (40%), Gaps = 15/184 (8%)
Query: 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIST 840
NK ++ G G G E+A L + ++ SR+ + ++ +I KS+ +
Sbjct: 10 NKVALVTGAGRGIGREIAKMLAKSVS-HVICISRT--QKSCDSVVDEI-KSFGYESSGYA 65
Query: 841 DDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYF 899
D++ + + ++ + + VD + N A + +D LF +++ L N+ Y
Sbjct: 66 GDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYI 125
Query: 900 DKYSRTMCPTL--GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEW 957
+ G+ + SS+ GN GQ NY + + + ++ LA E
Sbjct: 126 TQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKS--------LAKEL 177
Query: 958 GAVG 961
+
Sbjct: 178 ASRN 181
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 52.0 bits (124), Expect = 2e-07
Identities = 38/183 (20%), Positives = 61/183 (33%), Gaps = 12/183 (6%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K II G G G E+A GA +V++ + + + +I + Q
Sbjct: 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDIN--ADAANHVVDEI-QQLGGQAFAC 65
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
DIT+E + L A +KLG VD + N A F+ DF + + +
Sbjct: 66 RCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFD-MPMADFRRAYELNVFSFFH 124
Query: 899 FDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWG 958
+ G V+ + S N A+S R +A + G
Sbjct: 125 LSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVR------NMAFDLG 178
Query: 959 AVG 961
Sbjct: 179 EKN 181
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 51.9 bits (124), Expect = 2e-07
Identities = 33/188 (17%), Positives = 66/188 (35%), Gaps = 20/188 (10%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ ++ GG G G + + L GA + SR+ + + W+S +V S
Sbjct: 7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRN--QKELNDC-LTQWRSKGFKVEAS 62
Query: 840 TDDITTEAGVVNLLTEANK--LGPVDGIFNLAVVLKDALFENQTPEDFNAS----LGPKA 893
D+++ + L+ G ++ + N A ++ ++ T ED++
Sbjct: 63 VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 122
Query: 894 NATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGL 953
+ + + + V SSVS + YG M+++ L
Sbjct: 123 HLSVLAHPFLKASERG--NVVFISSVSGALAVPYEAVYGATKGAMDQLTR--------CL 172
Query: 954 AVEWGAVG 961
A EW
Sbjct: 173 AFEWAKDN 180
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Score = 50.3 bits (119), Expect = 2e-07
Identities = 33/156 (21%), Positives = 57/156 (36%), Gaps = 12/156 (7%)
Query: 540 LEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599
L A + C T Y+ Q G+ + + G GG+G I LA M A + +
Sbjct: 6 LAAVAPLLCAGITT-YSPLRHWQAGPGKKVGVV-GIGGLGHMGIKLAHAMGAHVVAFTTS 63
Query: 600 PEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSL-AEEKLQASVRCL 658
KRE + + + NSR+ + D +LN++ A L L
Sbjct: 64 EAKREAAKALGA----DEVVNSRNADEMA-----AHLKSFDFILNTVAAPHNLDDFTTLL 114
Query: 659 AQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVML 694
+ G +G + + + M+ + G M+
Sbjct: 115 KRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMI 150
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 51.7 bits (123), Expect = 2e-07
Identities = 33/183 (18%), Positives = 72/183 (39%), Gaps = 16/183 (8%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ ++ GG G G + + L GAR + SR+ + ++IW+ + V S
Sbjct: 5 KGTTALVTGGSKGIGYAIVEELAGLGAR-VYTCSRNEKE---LDECLEIWREKGLNVEGS 60
Query: 840 TDDITTEAGVVNLLTEANKL--GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATK 897
D+ + L+ + G ++ + N A V+ ++ T +D+N +G A
Sbjct: 61 VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 120
Query: 898 YFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAV 955
+ + + + G + SS++ + Y + + ++ ++ LA
Sbjct: 121 HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKS--------LAC 172
Query: 956 EWG 958
EW
Sbjct: 173 EWA 175
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.5 bits (120), Expect = 5e-07
Identities = 27/184 (14%), Positives = 55/184 (29%), Gaps = 13/184 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K I+ G G G E+A L GA +V+T+RS K Q + +
Sbjct: 13 QGKKVIVTGASKGIGREMAYHLAKMGAH-VVVTARS--KETLQKVVSHCLELGAASAHYI 69
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
+ + +A +G +D + + + S+ +
Sbjct: 70 AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVV 129
Query: 899 FDKYS-RTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEW 957
+ + + G VV SS++ Y + ++ + + E+
Sbjct: 130 LTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSS--------IRKEY 181
Query: 958 GAVG 961
Sbjct: 182 SVSR 185
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Score = 49.0 bits (115), Expect = 5e-07
Identities = 5/64 (7%), Positives = 12/64 (18%), Gaps = 2/64 (3%)
Query: 522 NCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFIC-GQMQKGESILIH-AGSGGVG 579
I + A T ++ + + + G
Sbjct: 110 WRTHALGNDDDFIKLPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDG 169
Query: 580 QAAI 583
+ I
Sbjct: 170 KQLI 173
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.2 bits (117), Expect = 1e-06
Identities = 37/185 (20%), Positives = 58/185 (31%), Gaps = 22/185 (11%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ + ++ G G G L GAR +V SR+ + +L + V V
Sbjct: 6 AGRRVLVTGAGKGIGRGTVQALHATGAR-VVAVSRT--QADLDSLVRECPGIEPVCV--- 59
Query: 840 TDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYF 899
D+ L +GPVD + N A V F T E F+ S A
Sbjct: 60 --DLGDWEATERAL---GSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 900 DKYSRTMCPTLGQF---VVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVE 956
+ G V SS R + Y ++ + + +A+E
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKV--------MALE 166
Query: 957 WGAVG 961
G
Sbjct: 167 LGPHK 171
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 48.1 bits (113), Expect = 1e-06
Identities = 12/127 (9%), Positives = 43/127 (33%), Gaps = 5/127 (3%)
Query: 544 ATVPCVYATAVYAMFICGQMQKG--ESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPE 601
+ T++ + G + G +++++ +G G A + + + +
Sbjct: 7 GAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQ 66
Query: 602 KREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQG 661
E + + N + + + + + GVD+ +++ + + + +
Sbjct: 67 --EKCLFLTSELGFDAAVNYKTGNVAEQLREACP-GGVDVYFDNVGGDISNTVISQMNEN 123
Query: 662 GRFLEIG 668
+ G
Sbjct: 124 SHIILCG 130
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Score = 48.6 bits (115), Expect = 2e-06
Identities = 33/186 (17%), Positives = 63/186 (33%), Gaps = 20/186 (10%)
Query: 785 IICGGLGGFGLELADWLVLRGAR------KLVLTSRSGVKNGYQALRIKIWKSYDVQVLI 838
+I G G G +A LVL+SR+ + + ++ ++
Sbjct: 5 LITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT--AADLEKISLEC-RAEGALTDT 61
Query: 839 STDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATK 897
T DI+ A V L T + G +D + N A V + + T EDF+ ++ T
Sbjct: 62 ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 121
Query: 898 YFDKYSRTMCPTL--GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAV 955
+ + + G +SV+ + + Y M+ + E + +
Sbjct: 122 FLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVET--------MRL 173
Query: 956 EWGAVG 961
Sbjct: 174 YARKCN 179
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Score = 48.0 bits (113), Expect = 2e-06
Identities = 9/58 (15%), Positives = 19/58 (32%), Gaps = 6/58 (10%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA 591
+PD+ + + V V ++ GE +G + I+ + A
Sbjct: 150 LPDRDKAMEKINIAEVVGVQVISLDD-APRGYGE-----FDAGVPKKFVIDPHKTFSA 201
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.6 bits (112), Expect = 2e-06
Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 6/156 (3%)
Query: 539 TLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVG 598
T E+ A + + ++A G + G +L+ G+G +G + +A+ M A
Sbjct: 2 TFEEGALIEP-LSVGIHACRR-GGVTLGHKVLVC-GAGPIGMVTLLVAKAMGAAQVVVTD 58
Query: 599 TPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSL-AEEKLQASVRC 657
R K + ++ G ++ + AE +QA +
Sbjct: 59 LSATRLSKAKEIGA-DLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYA 117
Query: 658 LAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVM 693
GG + +G L + +RE GV
Sbjct: 118 TRSGGTLVLVGLGSEMTTVPL-LHAAIREVDIKGVF 152
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Score = 46.4 bits (109), Expect = 2e-06
Identities = 8/61 (13%), Positives = 15/61 (24%), Gaps = 2/61 (3%)
Query: 511 VMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESIL 570
L LA +P+ + A A+ G G+ ++
Sbjct: 72 YAALVPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRGHT--GKVVV 129
Query: 571 I 571
Sbjct: 130 R 130
|
| >d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Score = 46.8 bits (110), Expect = 2e-06
Identities = 15/122 (12%), Positives = 35/122 (28%), Gaps = 9/122 (7%)
Query: 457 NHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-DSGKRVMG-- 513
+ +++YSS+N++D + + S R G V+
Sbjct: 31 GDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSSQHPRFREGDEVIATG 90
Query: 514 ----LTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESI 569
+T + E +P A + + G+ +G ++
Sbjct: 91 YEIGVTHFGGYSEYARLHGEWLVPLPKGLE-RIAQEISLAELPQALKRILRGE-LRGRTV 148
Query: 570 LI 571
+
Sbjct: 149 VR 150
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 48.1 bits (114), Expect = 3e-06
Identities = 29/183 (15%), Positives = 56/183 (30%), Gaps = 14/183 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+ K ++ GG G G +V GA K+V + +A+ ++ + L
Sbjct: 5 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEG--KAMAAELADAARYVHL-- 59
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+T A + A G + + N A +L E+ ++ L
Sbjct: 60 --DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFL 117
Query: 899 FDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWG 958
+ G+ + + S +G + + A+E G
Sbjct: 118 GIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTK------STALELG 171
Query: 959 AVG 961
G
Sbjct: 172 PSG 174
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 47.9 bits (113), Expect = 3e-06
Identities = 21/169 (12%), Positives = 48/169 (28%), Gaps = 12/169 (7%)
Query: 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIST 840
+ ++ GG G G R + + ++ +K+ S+ Q
Sbjct: 2 ARRVLVYGGRGALGSRCVQAFRARNWW-VASIDVVENEEASASVIVKMTDSFTEQA---- 56
Query: 841 DDITTEAGVVNLLTEANKLGPVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYF 899
V + + VD I +A ++ + +
Sbjct: 57 ------DQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 110
Query: 900 DKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAE 948
+ G + + + G G YGMA + ++C++ +
Sbjct: 111 SHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGK 159
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 46.2 bits (108), Expect = 4e-06
Identities = 24/154 (15%), Positives = 52/154 (33%), Gaps = 8/154 (5%)
Query: 540 LEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599
+ A + C T + + G+ + I G GG+G A+ AR M +
Sbjct: 3 FAEIAPILCAGVTVYKGLKQTN-ARPGQWVAIS-GIGGLGHVAVQYARAMGLHVAAIDID 60
Query: 600 PEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLA 659
K E RK + + ++R G +++ +++ ++
Sbjct: 61 DAKLELARKLGASLT-----VNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMAR 115
Query: 660 QGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVM 693
+GG +G + +V ++ G +
Sbjct: 116 RGGTIALVG-LPPGDFPTPIFDVVLKGLHIAGSI 148
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 47.2 bits (111), Expect = 5e-06
Identities = 25/188 (13%), Positives = 59/188 (31%), Gaps = 20/188 (10%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
S+ I+ GG G G + ++ G ++ S + + K++ Q
Sbjct: 1 SSGKVIVYGGKGALGSAILEFFKKNGYT-VLNIDLSANDQADSNILVDGNKNWTEQE--- 56
Query: 840 TDDITTEAGVVNLLTEANKLGPVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKY 898
++ + + VDG+F +A + ++ + + ++
Sbjct: 57 -------QSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAI 109
Query: 899 FDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWG 958
K + T G + + + YGMA + + + LA +
Sbjct: 110 AAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTS--------SLAAKDS 161
Query: 959 AVGEVGLV 966
+ + V
Sbjct: 162 GLPDNSAV 169
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Score = 45.5 bits (106), Expect = 7e-06
Identities = 25/156 (16%), Positives = 58/156 (37%), Gaps = 4/156 (2%)
Query: 539 TLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVG 598
+AA + C T A+ + +++L+ GG+G A+ +A+ + V
Sbjct: 2 NAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD 60
Query: 599 TPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCL 658
E+ K I S ++ ++ + +E+ L + L
Sbjct: 61 VREEAVEAAKRAGADY--VINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKAL 118
Query: 659 AQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVML 694
A+ G+++ + A+ + + + E F G ++
Sbjct: 119 AKQGKYV-MVGLFGADLHYHAPLITLSEIQFVGSLV 153
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 46.3 bits (109), Expect = 8e-06
Identities = 37/214 (17%), Positives = 70/214 (32%), Gaps = 23/214 (10%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
++S ++ GG G GL +A L G K+ +T R +++
Sbjct: 6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGS-GAPKGLFGVEV----------- 52
Query: 840 TDDITTEAGVVNLLTEANKLG-PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+T V T + PV+ + + A + DA T E F +
Sbjct: 53 --DVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFR 110
Query: 899 FDKYSRTMCPT--LGQFVVFSSVSCGRGNAGQTNYGMANS----IMERICEARRAEGLPG 952
+ + G+ + SVS G Q NY + + + I +
Sbjct: 111 VAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTA 170
Query: 953 LAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRI 986
V G + + + + E + + +R+
Sbjct: 171 NVVAPGYI-DTDMTRALDERIQQGALQFIPAKRV 203
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 46.6 bits (110), Expect = 9e-06
Identities = 32/186 (17%), Positives = 61/186 (32%), Gaps = 17/186 (9%)
Query: 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIST 840
++ ++ G G GLE+A L G R + + +R + G + ++ + V+ T
Sbjct: 2 SEVALVTGATSGIGLEIARRLGKEGLR-VFVCARG--EEGLRTTLKEL-REAGVEADGRT 57
Query: 841 DDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYF 899
D+ + + L+ + GPVD + N A E + +
Sbjct: 58 CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRV 117
Query: 900 DKYSRTMCPTLGQ----FVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAV 955
K L + V +S +G Y + + +A L +
Sbjct: 118 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKA--------LGL 169
Query: 956 EWGAVG 961
E G
Sbjct: 170 ELARTG 175
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 46.6 bits (110), Expect = 1e-05
Identities = 38/188 (20%), Positives = 59/188 (31%), Gaps = 19/188 (10%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+K II GG GG G A V GA K+V+ + + Q + I + +
Sbjct: 5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIA--DDHGQKVCNNIGSPDVISFVHC 61
Query: 840 TDDITTEAGVVNLLTE-ANKLGPVDGIFNLAVV--LKDALFENQTPEDFNASLGPKANAT 896
D+T + V NL+ K G +D +F V EDF +
Sbjct: 62 --DVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGA 119
Query: 897 KYFDKYSRTMCPTLGQ---FVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGL 953
K++ + + S S G Y + + + L
Sbjct: 120 FLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTS--------L 171
Query: 954 AVEWGAVG 961
E G G
Sbjct: 172 CTELGEYG 179
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 45.9 bits (108), Expect = 1e-05
Identities = 39/190 (20%), Positives = 73/190 (38%), Gaps = 15/190 (7%)
Query: 785 IICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDIT 844
++ G G G +A L G + LV +RS + + +I ++Y Q + D++
Sbjct: 5 VVTGASRGIGKAIALSLGKAGCKVLVNYARS--AKAAEEVSKQI-EAYGGQAITFGGDVS 61
Query: 845 TEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKY- 902
EA V ++ A + G +D + N A + +D L ++ + +
Sbjct: 62 KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAA 121
Query: 903 SRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGAVG 961
++ M G+ + +SV GN GQ NY A + + + A E +
Sbjct: 122 TKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKT--------AAREGASRN 173
Query: 962 -EVGLVADMA 970
V +V
Sbjct: 174 INVNVVCPGF 183
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 45.9 bits (108), Expect = 2e-05
Identities = 29/183 (15%), Positives = 61/183 (33%), Gaps = 13/183 (7%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K+ +I G G G A+ V GAR + + + +A R
Sbjct: 4 DGKTALITGSARGIGRAFAEAYVREGAR-VAIADINL-----EAAR-ATAAEIGPAACAI 56
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+T +A + + E ++ G +D + N A + A T E ++ + T +
Sbjct: 57 ALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLF 116
Query: 899 FDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWG 958
+ G+ +++ G G+ G+ + + ++ +
Sbjct: 117 MMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQS-----AGLNLI 171
Query: 959 AVG 961
G
Sbjct: 172 RHG 174
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 45.4 bits (107), Expect = 2e-05
Identities = 31/184 (16%), Positives = 57/184 (30%), Gaps = 28/184 (15%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
+K ++ G G +AD L GA ++ + +R+ + L + Y V
Sbjct: 3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARN------EELLKRSGHRYVVC---- 51
Query: 840 TDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYF 899
D+ + ++ K+ VD + A K F+ T EDF ++
Sbjct: 52 --DLRKDLDLL-----FEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKI 104
Query: 900 DKYSRTMCPT--LGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEW 957
+ G+ V +S S A + + L+ E
Sbjct: 105 VRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKT--------LSFEV 156
Query: 958 GAVG 961
G
Sbjct: 157 APYG 160
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 45.7 bits (108), Expect = 2e-05
Identities = 42/185 (22%), Positives = 65/185 (35%), Gaps = 24/185 (12%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
S K+ II GG G G E A V GA ++VL +
Sbjct: 4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVL------DEEGAATARELGDAARYQ 56
Query: 840 TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
D+T E ++ A + G VDG+ N A + E ++ E F +
Sbjct: 57 HLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFI 116
Query: 899 FDKYSRTMCPTL-----GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGL 953
+T+ P + G V SS + G A ++YG + + + +
Sbjct: 117 G---MKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKL--------A 165
Query: 954 AVEWG 958
AVE G
Sbjct: 166 AVELG 170
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 44.0 bits (103), Expect = 5e-05
Identities = 32/184 (17%), Positives = 58/184 (31%), Gaps = 20/184 (10%)
Query: 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTD 841
+S ++ GG G G A L RG R +V+ + G + ++ + + V +
Sbjct: 2 RSALVTGGASGLGRAAALALKARGYR-VVVLDLR--REGEDLIYVEGDVTREEDVRRAVA 58
Query: 842 DITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDK 901
EA + +++ A G+ + + +L N +
Sbjct: 59 RAQEEAPLFAVVSAAG-----VGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAW 113
Query: 902 YSRTMCPTL----GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEW 957
R P G V +SV+ G GQ Y + + + A E
Sbjct: 114 AMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLP--------AAREL 165
Query: 958 GAVG 961
G
Sbjct: 166 AGWG 169
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.5 bits (102), Expect = 7e-05
Identities = 25/185 (13%), Positives = 59/185 (31%), Gaps = 23/185 (12%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K I+ G G A GA K++ T + ++ ++ K +Q +
Sbjct: 5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDIN------ESKLQELEKYPGIQTRVL 57
Query: 840 TDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYF 899
+ N++ +D +FN+A + + +D++ S+ +
Sbjct: 58 DVTKKKQIDQFA-----NEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLM 112
Query: 900 DKYSRTMCPTL---GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVE 956
K + S S +G + Y + + + ++ +A +
Sbjct: 113 IKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKS--------VAAD 164
Query: 957 WGAVG 961
+ G
Sbjct: 165 FIQQG 169
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 43.1 bits (101), Expect = 1e-04
Identities = 19/179 (10%), Positives = 44/179 (24%), Gaps = 18/179 (10%)
Query: 785 IICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDIT 844
I+ G+ A L G + S + ++ + Q+
Sbjct: 4 IVTNVKHFGGMGSALRLSEAGHT-VACHDESFKQ----KDELEAFAETYPQL-----KPM 53
Query: 845 TEAGVVNLLTEA-NKLGPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKY 902
+E L+ + G VD + + + + + ED+ ++
Sbjct: 54 SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNA 113
Query: 903 SRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGAVG 961
+ + S + ++ A L+ E G
Sbjct: 114 VASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANA------LSKELGEYN 166
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.5 bits (96), Expect = 2e-04
Identities = 31/161 (19%), Positives = 53/161 (32%), Gaps = 12/161 (7%)
Query: 534 IPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI 593
IP AA + C T + G G+ + I G GG+G +++ M AE
Sbjct: 1 IPS----HLAAPLLCGGLTVYSPLVRNG-CGPGKKVGIV-GLGGIGSMGTLISKAMGAET 54
Query: 594 FTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQA 653
+ + KRE K ++ + + T V +SL +
Sbjct: 55 YVISRSSRKREDAMKMGA----DHYIATLEEGDWGEKYFDTFDLIVV-CASSLTDIDFNI 109
Query: 654 SVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVML 694
+ + GGR + I + L ++ S L
Sbjct: 110 MPKAMKVGGRIVSISIPEQHEMLSL-KPYGLKAVSISYSAL 149
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 42.2 bits (98), Expect = 2e-04
Identities = 26/191 (13%), Positives = 47/191 (24%), Gaps = 25/191 (13%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGAR-KLVLTSRSGVKNGYQALRIKIWKSYDVQVLI 838
S S ++ G G GL L LV ++ T+R L+ V L
Sbjct: 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD--VEKATELKSIKDSRVHVLPLT 59
Query: 839 STDDITTEAGVVNLLTEANKLGPVDGIFNLA-VVLKDALFENQTPEDFNASL-------- 889
T D + + V+ + E + + N A V+L L
Sbjct: 60 VTCDKSLDT-FVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVV 118
Query: 890 ------------GPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSI 937
+ + + + G Y M+ +
Sbjct: 119 LLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAA 178
Query: 938 MERICEARRAE 948
+ +
Sbjct: 179 INMFGRTLAVD 189
|
| >d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.4 bits (96), Expect = 2e-04
Identities = 10/74 (13%), Positives = 20/74 (27%), Gaps = 3/74 (4%)
Query: 504 LRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQM 563
L S +L + + +++PD P A + F +
Sbjct: 112 LSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPLEKALEAFETF---KK 168
Query: 564 QKGESILIHAGSGG 577
G I++
Sbjct: 169 GLGLKIMLKCDPSD 182
|
| >d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Score = 40.7 bits (94), Expect = 3e-04
Identities = 6/53 (11%), Positives = 15/53 (28%), Gaps = 1/53 (1%)
Query: 522 NCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAG 574
+ ++PD ++ T V A + + +I +
Sbjct: 124 RYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFEA-ARKKADNTIKVMIS 175
|
| >d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.7 bits (91), Expect = 5e-04
Identities = 12/91 (13%), Positives = 24/91 (26%), Gaps = 10/91 (10%)
Query: 491 YQHCVIGFEYSGRLRDSGKRVMGLTSGRS----------LANCCETDVEMAWEIPDQWTL 540
G + +G + G G A +++P++
Sbjct: 59 LLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLKP 118
Query: 541 EDAATVPCVYATAVYAMFICGQMQKGESILI 571
+ P + I G G+ IL+
Sbjct: 119 VIGSQYPLEKVAEAHENIIHGSGATGKMILL 149
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Score = 40.9 bits (95), Expect = 5e-04
Identities = 46/187 (24%), Positives = 78/187 (41%), Gaps = 22/187 (11%)
Query: 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIS 839
K ++ G G G +A+ L RGA K++ T+ S +NG QA+ + + +L
Sbjct: 3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATS--ENGAQAISDYLGANGKGLML-- 57
Query: 840 TDDITTEAGVVN-LLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKY 898
++T A + + L + G VD + N A + +D L E++N + N +
Sbjct: 58 --NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDI--IETNLSSV 113
Query: 899 FDKYSRTMCPTL----GQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGLA 954
F M + G+ + SV GN GQ NY A + + ++ LA
Sbjct: 114 FRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKS--------LA 165
Query: 955 VEWGAVG 961
E + G
Sbjct: 166 REVASRG 172
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Score = 40.2 bits (93), Expect = 0.001
Identities = 26/188 (13%), Positives = 54/188 (28%), Gaps = 18/188 (9%)
Query: 780 SNKSYIICGGLG--GFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVL 837
S K ++ G G +A L GA + L+ ++ + +
Sbjct: 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAE-VALSYQAERLRPEAEKLAEALGGALLFRA 65
Query: 838 ISTDDITTEAGVVNLLTEANKLGPVDGIFNLAVVLKD----ALFENQTPEDFNASLGPKA 893
T D +A G +D + + + + +D+ +L A
Sbjct: 66 DVTQDEELDALFAG---VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSA 122
Query: 894 NATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEGLPGL 953
+ + + + G V + + + +A + +E L
Sbjct: 123 YSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRY--------L 174
Query: 954 AVEWGAVG 961
A E G G
Sbjct: 175 AYELGPKG 182
|
| >d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Score = 39.3 bits (90), Expect = 0.001
Identities = 15/145 (10%), Positives = 37/145 (25%), Gaps = 2/145 (1%)
Query: 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIE 486
+VR + + + W + + + + + I + + VI
Sbjct: 28 VIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVIL 87
Query: 487 SRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATV 546
+ + + GL A T ++P +E
Sbjct: 88 HPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHK 147
Query: 547 PCVYATAVYAMFICGQMQKGESILI 571
+ + + G ++LI
Sbjct: 148 LDEINDVLERLEKGEVL--GRAVLI 170
|
| >d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus casei [TaxId: 1582]} Length = 80 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: apo-D-alanyl carrier protein domain: apo-D-alanyl carrier protein species: Lactobacillus casei [TaxId: 1582]
Score = 36.8 bits (85), Expect = 0.001
Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Query: 1022 IVDAVINILGLRDLKT---VSLHSTLAEL-GMDSMMAVEIKQTLEREFEVFLTPQDIRGL 1077
I + V++IL +L L E +DSM V++ L+ +F V +
Sbjct: 5 IKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRK 64
Query: 1078 TFAKLQDIA 1086
+ I
Sbjct: 65 EWDTPNKII 73
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Score = 39.9 bits (92), Expect = 0.001
Identities = 18/108 (16%), Positives = 38/108 (35%), Gaps = 7/108 (6%)
Query: 785 IICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDIT 844
+I GG G +A L +G R +V+ R + Q L ++ + ++ D++
Sbjct: 5 VITGGARRIGHSIAVRLHQQGFR-VVVHYRHS-EGAAQRLVAELNAARAGSAVLCKGDLS 62
Query: 845 TEAGVVNLLTEA-----NKLGPVDGIFNLAVVLKDALFENQTPEDFNA 887
+ +++ + G D + N A + A
Sbjct: 63 LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAA 110
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 39.9 bits (92), Expect = 0.002
Identities = 29/170 (17%), Positives = 48/170 (28%), Gaps = 10/170 (5%)
Query: 1151 EEPVGNNNTIFMVPGIEGIATVLEPLAKNINAQ-VLVFQFDH---------TNPPDTIPE 1200
E NNTI + G LA+ ++ VF++D + T+
Sbjct: 26 ENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTT 85
Query: 1201 MADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKCHLYLVDSAPDYVLT 1260
+SL + GT I L+ S VA E+ LE + +V+
Sbjct: 86 GKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDLELSFLITAVGVVNLRDTLEKA 145
Query: 1261 SLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILKYTDP 1310
S + R+ + + S L
Sbjct: 146 LGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVAN 195
|
| >d2jq4a1 a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Agrobacterium tumefaciens [TaxId: 358]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Hypothetical protein Atu2571 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 36.5 bits (84), Expect = 0.002
Identities = 12/66 (18%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 1022 IVDAVINILGLR-DLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIRGLTFA 1080
I + + L + T++ + L G+ S +V++ +E F++ + +FA
Sbjct: 5 IREILAKFGQLPTPVDTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFA 64
Query: 1081 KLQDIA 1086
++ I
Sbjct: 65 SIKAIE 70
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 38.3 bits (88), Expect = 0.003
Identities = 8/86 (9%), Positives = 27/86 (31%)
Query: 486 ESRRLYQHCVIGFEYSGRLRDSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAAT 545
+ R+ Q + + + R GK ++ + + +I +++ T
Sbjct: 111 QKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVT 170
Query: 546 VPCVYATAVYAMFICGQMQKGESILI 571
+ A + + +++
Sbjct: 171 HNLSFDEINKAFELMHSGKSIRTVVK 196
|
| >d1klpa_ a.28.1.1 (A:) Acyl carrier protein {Mycobacterium tuberculosis [TaxId: 1773]} Length = 115 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 36.7 bits (84), Expect = 0.003
Identities = 18/100 (18%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 1022 IVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIRGLTFAK 1081
I + + + G+ + S + +L +DS+ VEI E ++ V + +D+ GL
Sbjct: 12 IAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRT-- 69
Query: 1082 LQDIAVSFENDDKSKPVSTEASGGQVTALSVEDIPDVGIQ 1121
+ D+ + ++ P + +A ++ + +Q
Sbjct: 70 VGDVVAYIQKLEEENPEAAQALRAKIES--ENPDAVANVQ 107
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1392 | |||
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 100.0 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 99.95 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.94 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.93 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.92 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.92 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.92 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.92 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.91 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.91 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.91 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.91 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.91 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.91 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.91 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.91 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.91 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.91 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.91 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.91 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.91 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.9 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.9 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.9 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.9 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.9 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.9 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.9 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.9 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.9 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.9 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.89 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.89 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.89 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.89 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.88 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.88 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.88 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.88 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.88 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.88 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.87 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.87 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.87 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.87 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.87 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.87 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.87 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.86 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.86 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.86 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.86 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.86 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.85 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.85 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.85 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.85 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.84 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.84 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.84 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.84 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.84 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.83 | |
| d1iz0a1 | 131 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.83 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.82 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.82 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.81 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 99.81 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 99.81 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 99.81 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.81 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.81 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.78 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 99.78 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.78 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 99.78 | |
| d1qora1 | 147 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.78 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.78 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.78 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 99.77 | |
| d1yb5a1 | 150 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.77 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 99.77 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.77 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.76 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.76 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 99.76 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.75 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.75 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 99.74 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.74 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 99.74 | |
| d1xa0a1 | 152 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.74 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 99.73 | |
| d1e3ja1 | 178 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 99.73 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.73 | |
| d1tt7a1 | 162 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.7 | |
| d1piwa1 | 192 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 99.7 | |
| d1h2ba1 | 171 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 99.69 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.69 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.68 | |
| d1o89a1 | 146 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.67 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.65 | |
| d1cdoa1 | 199 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 99.65 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.65 | |
| d1llua1 | 175 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 99.65 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.61 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.6 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.6 | |
| d1gu7a1 | 175 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.6 | |
| d1f8fa1 | 194 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 99.6 | |
| d2fzwa1 | 197 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.59 | |
| d1rjwa1 | 171 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.59 | |
| d1pl8a1 | 185 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 99.59 | |
| d1e3ia1 | 202 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 99.56 | |
| d1jvba1 | 177 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.53 | |
| d1vj0a1 | 184 | Hypothetical protein TM0436 {Thermotoga maritima [ | 99.53 | |
| d1kola1 | 201 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.49 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.44 | |
| d2jhfa1 | 198 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 99.36 | |
| d1uufa1 | 179 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.3 | |
| d1p0fa1 | 198 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 99.25 | |
| d2pnga1 | 76 | Type I fatty acid synthase ACP domain {Rat (Rattus | 99.25 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.25 | |
| d1jqba1 | 177 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.22 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.18 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.08 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.07 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.01 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 98.97 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 98.96 | |
| d2gdwa1 | 76 | Peptidyl carrier protein (PCP), thioester domain { | 98.95 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 98.94 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 98.93 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.89 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 98.88 | |
| d1vj1a1 | 166 | Putative zinc-binding alcohol dehydrogenase {Mouse | 98.88 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 98.87 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 98.87 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 98.86 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 98.84 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 98.82 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.81 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 98.8 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 98.79 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 98.79 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 98.79 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 98.77 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 98.77 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 98.73 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 98.71 | |
| d1v3va1 | 147 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 98.71 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 98.67 | |
| d2jq4a1 | 83 | Hypothetical protein Atu2571 {Agrobacterium tumefa | 98.67 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 98.65 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 98.64 | |
| d1vkua_ | 85 | Acyl carrier protein {Thermotoga maritima [TaxId: | 98.64 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 98.64 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 98.63 | |
| d2af8a_ | 86 | Actinorhodin polyketide synthase acyl carrier prot | 98.62 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 98.62 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 98.62 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 98.61 | |
| d1or5a_ | 82 | Frenolicin polyketide synthase acyl carrier protei | 98.6 | |
| d1nq4a_ | 95 | Oxytetracycline polyketide synthase acyl carrier { | 98.58 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 98.57 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 98.53 | |
| d1f80d_ | 74 | Acyl carrier protein {Bacillus subtilis [TaxId: 14 | 98.52 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.5 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 98.49 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 98.49 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 98.46 | |
| d1klpa_ | 115 | Acyl carrier protein {Mycobacterium tuberculosis [ | 98.46 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 98.46 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 98.45 | |
| d1dv5a_ | 80 | apo-D-alanyl carrier protein {Lactobacillus casei | 98.42 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 98.4 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.39 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 98.38 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 98.37 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 98.36 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 98.34 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 98.31 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 98.29 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 98.29 | |
| d1t8ka_ | 77 | Acyl carrier protein {Escherichia coli [TaxId: 562 | 98.27 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 98.27 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 98.25 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 98.2 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 98.08 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 98.08 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 98.06 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 98.03 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 97.86 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 97.79 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 97.77 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 97.76 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 97.71 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 97.67 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 97.64 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 97.62 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 97.59 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 97.57 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 97.57 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 97.55 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 97.45 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 97.37 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 97.36 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 97.28 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 97.24 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 97.19 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 97.09 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 96.94 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 96.75 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 96.73 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 96.61 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 96.54 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 96.54 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 96.48 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 96.45 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 96.36 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 96.29 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 96.23 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 96.22 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 96.2 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.19 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 96.19 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 96.17 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 96.16 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 96.14 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 96.14 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 96.12 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 96.1 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 96.08 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 96.05 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 96.0 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 95.95 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 95.93 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 95.91 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 95.88 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 95.86 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 95.85 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 95.75 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 95.69 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 95.65 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 95.64 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 95.51 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 95.49 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 95.49 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 95.47 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 95.46 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 95.45 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 95.45 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 95.43 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 95.39 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 95.38 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 95.37 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 95.34 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 95.29 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 95.28 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 95.28 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 95.26 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 95.21 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 95.18 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 95.17 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 95.17 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 95.1 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 95.1 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 95.08 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 95.01 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 94.97 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 94.97 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 94.96 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 94.93 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 94.9 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 94.89 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 94.88 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 94.73 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 94.71 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 94.69 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 94.68 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 94.66 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 94.66 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 94.57 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 94.51 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 94.28 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 94.19 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 94.16 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 94.13 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 94.12 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 94.07 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 94.04 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 93.98 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 93.98 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 93.87 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 93.85 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 93.82 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 93.72 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 93.7 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 93.67 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 93.67 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 93.64 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 93.54 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 93.48 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 93.47 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 93.31 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 93.25 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 93.22 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 93.19 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 93.19 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 93.13 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 93.05 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 93.03 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 92.98 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 92.94 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 92.9 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 92.59 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 92.58 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 92.49 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 92.43 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 92.25 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 92.24 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 92.18 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 92.15 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 92.1 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 91.93 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 91.89 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 91.64 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 91.6 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 91.58 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 91.27 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 91.24 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 90.9 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 90.87 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 90.72 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 90.65 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 90.47 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 90.42 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 90.32 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 90.29 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 90.18 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 90.1 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 90.08 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 89.59 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 89.4 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 89.22 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 89.22 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 88.77 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 88.76 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 88.73 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 88.66 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 88.57 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 87.69 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 87.6 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 87.37 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 87.16 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 86.82 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 86.79 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 86.67 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 86.3 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 86.13 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 85.86 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 85.77 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 85.76 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 85.7 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 85.68 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 85.59 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 85.56 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 85.36 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 85.3 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 85.3 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 85.06 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 84.98 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 84.91 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 84.75 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 84.47 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 84.42 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 84.33 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 84.3 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 84.06 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 84.02 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 83.82 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 83.81 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 83.67 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 83.56 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 83.43 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 83.42 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 83.23 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 82.93 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 82.9 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 82.85 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 82.68 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 82.34 | |
| d2fr1a2 | 209 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 82.21 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 82.13 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 82.13 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 82.09 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 82.03 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 81.96 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 81.82 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 81.71 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 81.68 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 81.45 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 81.17 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 80.68 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 80.64 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 80.55 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 80.5 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 80.44 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 80.39 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 80.22 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 80.14 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 80.11 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 80.09 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 80.03 |
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=100.00 E-value=3.8e-33 Score=314.28 Aligned_cols=223 Identities=25% Similarity=0.400 Sum_probs=195.1
Q ss_pred cccCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Q psy1119 776 YYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 776 ~~~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
..|+|++|||||||+||||+++|++|+++|+++|++++|++.+.+..++.+++++..|+++.++.||++|.++++++++.
T Consensus 4 ~~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~ 83 (259)
T d2fr1a1 4 DEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGG 83 (259)
T ss_dssp CCCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred cccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcc
Confidence 35899999999999999999999999999999999999998777777788888999999999999999999999999999
Q ss_pred HhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 856 ANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 856 ~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+.+.++|++||||||+..+.++.+++.++|+.++++|+.|+++|++++.+. +.++||++||+++..|++||++|+|+|
T Consensus 84 i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~--~~~~iv~~SS~a~~~g~~~~~~YaAak 161 (259)
T d2fr1a1 84 IGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL--DLTAFVLFSSFASAFGAPGLGGYAPGN 161 (259)
T ss_dssp SCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--CCSEEEEEEEHHHHTCCTTCTTTHHHH
T ss_pred ccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc--CCceEeeecchhhccCCcccHHHHHHH
Confidence 877789999999999999999999999999999999999999999987653 668999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccCCC
Q psy1119 936 SIMERICEARRAEGLPGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEP 1002 (1392)
Q Consensus 936 a~ld~la~~r~~~Glp~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~~ 1002 (1392)
+|+++|+++++.+|+++.+|+||+|.+.||..+... ..+...|..++.++++.+.++.++....+
T Consensus 162 a~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~~~--~~~~~~G~~~~~~~~~~~~l~~~l~~~~~ 226 (259)
T d2fr1a1 162 AYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPVA--DRFRRHGVIEMPPETACRALQNALDRAEV 226 (259)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEECCBC--------------CTTTTEECBCHHHHHHHHHHHHHTTCS
T ss_pred HhHHHHHHHHHhCCCCEEECCCCcccCCccccchHH--HHHHhcCCCCCCHHHHHHHHHHHHhCCCc
Confidence 999999999999999999999999999999765422 23345677788889999999988876654
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.95 E-value=1.8e-27 Score=252.96 Aligned_cols=182 Identities=36% Similarity=0.580 Sum_probs=168.8
Q ss_pred hhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceee
Q psy1119 541 EDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGN 620 (1392)
Q Consensus 541 e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~ 620 (1392)
||||++|++++|||++|++.+++++||+|||+||+|+||++++|+|+++|++|++++++++|++++++ ++++++++
T Consensus 1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~----~Ga~~vi~ 76 (183)
T d1pqwa_ 1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----LGVEYVGD 76 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----TCCSEEEE
T ss_pred CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeeccccccccccc----cccccccc
Confidence 58999999999999999999999999999999999999999999999999999999999999999986 78999999
Q ss_pred CCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhhhhh
Q psy1119 621 SRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNFFFA 700 (1392)
Q Consensus 621 s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~~~~ 700 (1392)
+++.++.+.+++.|+++|+|+|+|+++++.++.+++||+++||++.+|..+........+..+.+++++.++.+......
T Consensus 77 ~~~~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (183)
T d1pqwa_ 77 SRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKL 156 (183)
T ss_dssp TTCSTHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHHH
T ss_pred CCccCHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceecc
Confidence 99999999999999999999999999999999999999999999999987776666777778889999999998877777
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCcce
Q psy1119 701 EQEWKMSLQKALQKAIDAGAVQPLVR 726 (1392)
Q Consensus 701 ~~~~~~~~~~~~~~~l~~g~l~pl~~ 726 (1392)
.++..++.++.+.+++++|+++|+|.
T Consensus 157 ~~~~~~~~~~~v~~~i~~G~i~p~Pi 182 (183)
T d1pqwa_ 157 QPARYRQLLQHILQHVADGKLEVLPV 182 (183)
T ss_dssp CHHHHHHHHHHHHHHHHTTSSCCCCC
T ss_pred CHHHHHHHHHHHHHHHHCCCCceeCC
Confidence 77777788888889999999999764
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.94 E-value=9.5e-27 Score=260.86 Aligned_cols=207 Identities=17% Similarity=0.103 Sum_probs=160.2
Q ss_pred cCCCCCceeEeecC--CCccccccHHHHhhcCCceEEEecC------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEE
Q psy1119 1152 EPVGNNNTIFMVPG--IEGIATVLEPLAKNINAQVLVFQFD------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLV 1223 (1392)
Q Consensus 1152 ~~~g~~~pLF~vp~--agG~~~~y~~La~~L~~~~~v~~l~------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~ 1223 (1392)
+.++.++||||||| +||++..|.+|++.|..+++||+++ .++++.|+++||+.|+++|++. +|++||+|+
T Consensus 37 ~~g~~~~~l~c~~~~~~gg~~~~y~~La~~L~~~~~V~al~~pG~~~~e~~~~s~~~~a~~~~~~i~~~--~~~~P~~L~ 114 (255)
T d1mo2a_ 37 ADGPGEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPLPSSMAAVAAVQADAVIRT--QGDKPFVVA 114 (255)
T ss_dssp ECCSCSSEEEEECCCSSSCSGGGGHHHHHHHTTTCCEEEECCTTSSTTCCEESSHHHHHHHHHHHHHHT--TSSSCEEEE
T ss_pred cCCCCCCeEEEECCCCCCCCHHHHHHHHHhcCCCceEEEEeCCCcCCCCCCCCCHHHHHHHHHHHHHHh--CCCCCEEEE
Confidence 33455688999998 7899999999999999888888886 4667789999999999999854 489999999
Q ss_pred eechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccc--cCCHHHHHHHHHHHHHH
Q psy1119 1224 GFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDA--THSRTYQRNLAHAAYKR 1300 (1392)
Q Consensus 1224 G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~--~~~~~~l~~~~~~~~~~ 1300 (1392)
||||||.||||||++|+++|.++ .|+++|+++|..... .......+........ ..+.. .+..+..+
T Consensus 115 GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~----~l~a~~~~ 184 (255)
T d1mo2a_ 115 GHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDA------MNAWLEELTATLFDRETVRMDDT----RLTALGAY 184 (255)
T ss_dssp ECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSHHHH------HHHHHHHHHTTCC----CCCCHH----HHHHHHHH
T ss_pred EeCCcHHHHHHHHHhhHhcCCCccEEEEECCCCCCCccc------hhhHHHHHHHHhhccccccCCHH----HHHHHHHH
Confidence 99999999999999999999988 789999987653211 1222233333322211 12222 34566778
Q ss_pred HHhhccccCCCCCcccceEEEEeeCCCCCCChhhcCcccccCCCeEEEEEccCccccccChHHHHHHHhhhcccC
Q psy1119 1301 ITSILKYTDPKHKAFGGNITLLRPTEQALPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDSTDF 1375 (1392)
Q Consensus 1301 ~~~~~~y~~~~~~~~~~pi~l~~a~~~~~~~~~~~~W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~~~L~ 1375 (1392)
+++...|++. ++++|+++++++++.. .....+|+.++.+.++++.++|+||+|+++ +...++..|++.|.
T Consensus 185 ~~~~~~~~~~---~~~~p~l~v~a~~~~~-~~~~~~w~~~~~~~~~~~~v~G~H~~ml~~-~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 185 DRLTGQWRPR---ETGLPTLLVSAGEPMG-PWPDDSWKPTWPFEHDTVAVPGDHFTMVQE-HADAIARHIDAWLG 254 (255)
T ss_dssp HHHHHHCCCC---CCCCCEEEEECCSSSS-CCTTCCCCCCCCSSCEEEECCSCCSSCSSC-CHHHHHHHHHHHHT
T ss_pred HHHHhcCCCc---cccceEEEeecCCCCC-cchhhHHHHhCCCCcEEEEECCCCcccccc-cHHHHHHHHHHHhC
Confidence 8889999887 7999999999987742 234568999999999999999999999984 56777777777654
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.5e-25 Score=235.94 Aligned_cols=173 Identities=27% Similarity=0.421 Sum_probs=151.4
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCc
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEEN 617 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~ 617 (1392)
+||++||++|++++|||++|.+.+++++|++|||+||+|+||++++|+|+++|++|++++++++|++++++ +|+++
T Consensus 1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~----~Ga~~ 76 (174)
T d1yb5a2 1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ----NGAHE 76 (174)
T ss_dssp SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCSE
T ss_pred CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCcccccccccccccccccc----cCccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999987 78999
Q ss_pred eeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhh
Q psy1119 618 IGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNF 697 (1392)
Q Consensus 618 i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~ 697 (1392)
++|+++.++.+.+++.|+++|+|+|+|+++++.++.++++++++||++.+|.... .......++.|+++++|+.+..
T Consensus 77 vi~~~~~~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~--~~~~~~~~~~k~~~i~g~~~~~- 153 (174)
T d1yb5a2 77 VFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGT--IEINPRDTMAKESSIIGVTLFS- 153 (174)
T ss_dssp EEETTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCSC--EEECTHHHHTTTCEEEECCGGG-
T ss_pred ccccccccHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCCC--CCCCHHHHHHCCCEEEEEEecC-
Confidence 9999999999999999999999999999999999999999999999999996432 2222345678999999986543
Q ss_pred hhhCHHHHHHHHHHHHHHHHcC
Q psy1119 698 FFAEQEWKMSLQKALQKAIDAG 719 (1392)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~l~~g 719 (1392)
..++..+++.+.+.+.++.|
T Consensus 154 --~~~~~~~~~~~~l~~g~~~G 173 (174)
T d1yb5a2 154 --STKEEFQQYAAALQAGMEIG 173 (174)
T ss_dssp --CCHHHHHHHHHHHHHHHHHT
T ss_pred --CCHHHHHHHHHHHHHHHHcc
Confidence 33555666777777777655
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.92 E-value=9.2e-25 Score=243.37 Aligned_cols=181 Identities=20% Similarity=0.264 Sum_probs=160.8
Q ss_pred cccCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Q psy1119 776 YYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 776 ~~~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
+++..+|++|||||++|||+++|+.|+++|++ |++++|+. +..++..+++++.|.++..+.||++|++++++++++
T Consensus 5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~-V~~~~r~~---~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~ 80 (251)
T d2c07a1 5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSH-VICISRTQ---KSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINK 80 (251)
T ss_dssp CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSE-EEEEESSH---HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEECCH---HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 45678999999999999999999999999997 88899974 344556677888899999999999999999999999
Q ss_pred H-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHH
Q psy1119 856 A-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 856 ~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
+ +++|+||++|||||.....++.+++.++|+++++.|+.|++++.+++.+++ .+.+.||++||+++..|.++++.|+
T Consensus 81 ~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~ 160 (251)
T d2c07a1 81 ILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYS 160 (251)
T ss_dssp HHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHH
T ss_pred HHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHH
Confidence 8 789999999999999999999999999999999999999999999886655 3458999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 933 MANSIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 933 aana~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
++|+++.+|++..+.+. ..+.+|..|.+
T Consensus 161 asKaal~~ltr~lA~el~~~gIrVN~V~PG~v 192 (251)
T d2c07a1 161 SSKAGVIGFTKSLAKELASRNITVNAIAPGFI 192 (251)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEccCCE
Confidence 99999999999998774 44556665554
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=1e-24 Score=230.67 Aligned_cols=177 Identities=23% Similarity=0.258 Sum_probs=146.2
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCc
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEEN 617 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~ 617 (1392)
+||++||++|++++|||++|.+.+++++||+|||+||+|++|++++|+|+..||+|++++++++|++++++ +|+++
T Consensus 1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~----lGa~~ 76 (179)
T d1qora2 1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----AGAWQ 76 (179)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTCSE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh----cCCeE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999987 68999
Q ss_pred eeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCcccccccc-CCCcEEEEEechh
Q psy1119 618 IGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVF-MRETSFHGVMLDN 696 (1392)
Q Consensus 618 i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~-~k~~s~~g~~~~~ 696 (1392)
++|+++.++.++++++|+|+|+|+|+|+++++.+..++++++++||++.+|.............+. ...+.+....+..
T Consensus 77 vi~~~~~d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 156 (179)
T d1qora2 77 VINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQG 156 (179)
T ss_dssp EEETTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHH
T ss_pred EEECCCCCHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccCCccccchhhhhccceEEEEeeEEee
Confidence 999999999999999999999999999999999999999999999999998765443322211222 2334444333333
Q ss_pred hhhhCHHHHHHHHHHHHHHHHcC
Q psy1119 697 FFFAEQEWKMSLQKALQKAIDAG 719 (1392)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~l~~g 719 (1392)
+. ..++...+..+.+.+++++|
T Consensus 157 ~~-~~~~~~~~~~~~l~~lv~~G 178 (179)
T d1qora2 157 YI-TTREELTEASNELFSLIASG 178 (179)
T ss_dssp HC-CSHHHHHHHHHHHHHHHHTT
T ss_pred ec-CCHHHHHHHHHHHHHHHHCc
Confidence 22 23444455566677777776
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.92 E-value=6.4e-24 Score=237.64 Aligned_cols=180 Identities=19% Similarity=0.189 Sum_probs=159.5
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++|++|||||++|||+++|+.|+++|++ |++++|+.. +..+...+++++.|.++..++||++|+++++++++++ +
T Consensus 5 L~gK~alITGas~GIG~aia~~la~~G~~-Vv~~~r~~~--~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (261)
T d1geea_ 5 LEGKVVVITGSSTGLGKSMAIRFATEKAK-VVVNYRSKE--DEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK 81 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCH--HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999997 888999742 3345566778888999999999999999999999998 7
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--C-CCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--T-LGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~-l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
++|+||++|||||+....++.+++.++|+++++.|+.|++++.+++.+++. . .+.||++||+++..+.++++.|+++
T Consensus 82 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~as 161 (261)
T d1geea_ 82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAAS 161 (261)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccC
Confidence 799999999999999999999999999999999999999999998866542 2 3469999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++.+|++..+.+ |..+-+|..|.+.
T Consensus 162 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~v~ 192 (261)
T d1geea_ 162 KGGMKLMTETLALEYAPKGIRVNNIGPGAIN 192 (261)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred CccchhhHHHHHHHhhhhCcEEEEEeeCcCc
Confidence 99999999998877 5666777777663
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.92 E-value=5.7e-25 Score=230.08 Aligned_cols=172 Identities=16% Similarity=0.242 Sum_probs=136.5
Q ss_pred CCHhhHhhhhHHHHHHHHH---HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCC
Q psy1119 538 WTLEDAATVPCVYATAVYA---MFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIK 614 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~a---L~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~ 614 (1392)
+||+|||++|+++.|||++ |...+++++|++||||||+||||.+++|+|+++|++|++|+++++|.+++++ ++
T Consensus 1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~----lG 76 (176)
T d1xa0a2 1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----LG 76 (176)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----TT
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh----cc
Confidence 6999999999999999966 4567899999999999999999999999999999999999999999999987 79
Q ss_pred cCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEec
Q psy1119 615 EENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVML 694 (1392)
Q Consensus 615 ~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~ 694 (1392)
+++++|+++. + ++..+.++++|||+|||+++++.+..+++||+++||++.+|.............++.|+++++|++.
T Consensus 77 a~~vi~~~~~-~-~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv~~ 154 (176)
T d1xa0a2 77 AKEVLAREDV-M-AERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDS 154 (176)
T ss_dssp CSEEEECC-----------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCS
T ss_pred cceeeecchh-H-HHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEEeC
Confidence 9999997643 3 3455678888999999999999999999999999999999986544444444466789999999864
Q ss_pred hhhhhhCHHHHHHHHHHHHHHHHcCCCCC
Q psy1119 695 DNFFFAEQEWKMSLQKALQKAIDAGAVQP 723 (1392)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~l~~g~l~p 723 (1392)
.. .+++.+..+.+.+ .|.++|
T Consensus 155 ~~---~~~~~~~~~~~~l-----ag~lkP 175 (176)
T d1xa0a2 155 VY---CPMDLRLRIWERL-----AGDLKP 175 (176)
T ss_dssp SS---CCHHHHHHHHHHH-----HTTTCC
T ss_pred Cc---CCHHHHHHHHHHH-----hcccCC
Confidence 32 2334444433332 366776
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=3.8e-24 Score=238.82 Aligned_cols=177 Identities=20% Similarity=0.169 Sum_probs=155.4
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+|++|||||++|||+++|+.|+++||+ |++++|+. +..++..+++++.|.++.+++||++++++++++++++ +
T Consensus 9 L~gK~alITGas~GIG~aia~~la~~Ga~-V~~~~r~~---~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~ 84 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEIAITFATAGAS-VVVSDINA---DAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS 84 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCE-EEEEESCH---HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 37899999999999999999999999997 88889974 3445566778888999999999999999999999998 7
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||++|||||+....++ +++.++|++++++|+.|++++.+++.+++. ..+.+|++||+++..|.++++.|+++|
T Consensus 85 ~~g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asK 163 (255)
T d1fmca_ 85 KLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSK 163 (255)
T ss_dssp HHSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred HcCCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHH
Confidence 79999999999999888877 799999999999999999999988766543 356899999999999999999999999
Q ss_pred HHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 936 SIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
+++.+|++..+.+. ..+-+|..|.+
T Consensus 164 aal~~lt~~lA~el~~~gIrVN~I~PG~i 192 (255)
T d1fmca_ 164 AAASHLVRNMAFDLGEKNIRVNGIAPGAI 192 (255)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHHhCccCeEEEEeeeCcC
Confidence 99999999988773 44555655554
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.91 E-value=4.2e-24 Score=237.40 Aligned_cols=176 Identities=16% Similarity=0.146 Sum_probs=154.5
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+|++|||||++|||+++|+.|+++||+ |++++|+.. +.. .+.++..|.++..++||++|+++++++++++ +
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~Ga~-V~~~~~~~~--~~~---~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~ 76 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVEGAD-IAIADLVPA--PEA---EAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIS 76 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCC--HHH---HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCch--HHH---HHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999997 888898753 222 2345667889999999999999999999998 7
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||++|||||+....++.+++.++|+++++.|+.|++++.+++.+++. ..+.+|++||+++..|.++++.|+++|
T Consensus 77 ~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK 156 (247)
T d2ew8a1 77 TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTK 156 (247)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhh
Confidence 799999999999999999999999999999999999999999998877653 458999999999999999999999999
Q ss_pred HHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 936 SIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
+++.+|++..+.+. ..+-+|..|.+
T Consensus 157 aal~~ltk~lA~ela~~gIrVN~I~PG~i 185 (247)
T d2ew8a1 157 AANIGFTRALASDLGKDGITVNAIAPSLV 185 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCC
T ss_pred ccHHHHHHHHHHHhcccCeEEEEEeeCCC
Confidence 99999999988774 44555655554
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.91 E-value=9.9e-24 Score=233.21 Aligned_cols=211 Identities=19% Similarity=0.156 Sum_probs=170.8
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCc------eEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGAR------KLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr------~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
+++|||||++|||+++|+.|+++|++ .+++++|+. +..++..++++..|.++..++||++|++++++++++
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~---~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~ 78 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA---ADLEKISLECRAEGALTDTITADISDMADVRRLTTH 78 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH---HHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCH---HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 46899999999999999999999997 488889984 334556677788899999999999999999999999
Q ss_pred H-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHH
Q psy1119 856 A-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 856 ~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
+ +++|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+++. ..+.+|++||+++..|.++++.|+
T Consensus 79 ~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~ 158 (240)
T d2bd0a1 79 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYC 158 (240)
T ss_dssp HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred HHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHH
Confidence 8 7899999999999999999999999999999999999999999999877663 458999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCC----CeEEEEccccCccccccchhhhhHHHHHcCccccchhhhHHHHHHHHccCCC
Q psy1119 933 MANSIMERICEARRAEGL----PGLAVEWGAVGEVGLVADMAEDNLEVVIGGTLQQRISNCLECLNEFLIQSEP 1002 (1392)
Q Consensus 933 aana~ld~la~~r~~~Gl----p~~ai~~g~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~l~~~~~ 1002 (1392)
++|+++.+|++..+.+.. .+.+|..|.+. +.|..+...... .....+++..+.+-.+++++..
T Consensus 159 asK~al~~lt~~la~el~~~gIrvn~i~PG~v~-T~~~~~~~~~~~------~~~~~PedvA~~v~~l~s~~~~ 225 (240)
T d2bd0a1 159 MSKFGQRGLVETMRLYARKCNVRITDVQPGAVY-TPMWGKVDDEMQ------ALMMMPEDIAAPVVQAYLQPSR 225 (240)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBC-STTTCCCCSTTG------GGSBCHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHHHHHhCcCCeEEEEeeeCccc-CchhhhcCHhhH------hcCCCHHHHHHHHHHHHcCCcc
Confidence 999999999999888743 45566665542 233322211110 0123456666666666665543
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.91 E-value=3.9e-24 Score=237.14 Aligned_cols=175 Identities=20% Similarity=0.251 Sum_probs=153.4
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEe-cCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhc
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLT-SRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKL 859 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~-sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~ 859 (1392)
+++|||||++|||+++|+.|+++|++ |++. .|+. +..++..++++..|.++..++||++|+++++++++++ +++
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~-V~i~~~~~~---~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCK-VLVNYARSA---KAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW 77 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCH---HHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCCH---HHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 47999999999999999999999998 5554 5553 3345556667777899999999999999999999998 779
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
|+||++|||||.....++.+++.++|+++++.|+.|++++.+++.++| .+.+.||++||+++..|.++++.|+++|++
T Consensus 78 g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaa 157 (244)
T d1edoa_ 78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAG 157 (244)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred CCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999887765 356899999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+.+|++..+.+ |..+-+|..|.+
T Consensus 158 l~~ltk~lA~el~~~gIrvN~I~PG~i 184 (244)
T d1edoa_ 158 VIGFSKTAAREGASRNINVNVVCPGFI 184 (244)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEEECSB
T ss_pred HHHChHHHHHHHhhhCcEEEEEeccee
Confidence 99999999887 444556656554
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.91 E-value=5.6e-24 Score=238.11 Aligned_cols=178 Identities=19% Similarity=0.173 Sum_probs=157.4
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+|++|||||++|||+++|+.|+++|++ |++++|+. +..++..+++++.|.++..++||++|+++++++++++ ++
T Consensus 1 DgKValITGas~GIG~aia~~la~~Ga~-V~i~~r~~---~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~ 76 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEGLR-VFVCARGE---EGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER 76 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 3689999999999999999999999997 88899974 3345566777888999999999999999999999998 78
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC----CCCeEEEecccccccCCCCChhHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP----TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~----~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+|+||++|||||+....++.+++.++|++++++|+.|++++.+++.+++. ..+.+|++||+++..|.++++.|+++
T Consensus 77 ~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~as 156 (257)
T d2rhca1 77 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSAS 156 (257)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred hCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHH
Confidence 99999999999999999999999999999999999999999998866431 33789999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCC-eEEEEccccC
Q psy1119 935 NSIMERICEARRAEGLP-GLAVEWGAVG 961 (1392)
Q Consensus 935 na~ld~la~~r~~~Glp-~~ai~~g~~~ 961 (1392)
|+++.+|++..+.+..| .+.+|.-.+|
T Consensus 157 Kaal~~ltk~lA~el~~~gIrVN~I~PG 184 (257)
T d2rhca1 157 KHGVVGFTKALGLELARTGITVNAVCPG 184 (257)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEeeC
Confidence 99999999999998665 3555544444
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.91 E-value=5.8e-24 Score=237.62 Aligned_cols=175 Identities=17% Similarity=0.140 Sum_probs=154.5
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g 860 (1392)
|++|||||++|||+++|+.|+++|++ |++++|+. +..++..+++++.|.++..++||++|+++++++++++ +++|
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~-V~~~~r~~---~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFA-VAIADYND---ATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLG 77 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence 78999999999999999999999997 88999984 3345566777888999999999999999999999998 7799
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC---CCCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC---PTLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~---~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+||++|||||+...+++.+++.++|+++++.|+.|++++.+++.+++ ...+.+|++||+++..+.++++.|+++|++
T Consensus 78 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa 157 (255)
T d1gega_ 78 GFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFA 157 (255)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHH
Confidence 99999999999999999999999999999999999999998875532 234789999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+.+|++..+.+ |..+-+|..|.+
T Consensus 158 l~~ltk~lA~el~~~gIrVN~I~PG~i 184 (255)
T d1gega_ 158 VRGLTQTAARDLAPLGITVNGYCPGIV 184 (255)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHhhHHHHHHHhhhhCcEEEEEecCcc
Confidence 99999998877 444556666554
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.91 E-value=4.6e-24 Score=239.21 Aligned_cols=179 Identities=21% Similarity=0.196 Sum_probs=154.3
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHH-hcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIW-KSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l-~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
.++|++|||||++|||+++|+.|+++|++ |++++|+.. +..++..+++ +..|.++.+++||++|+++++++++++
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~-V~~~~r~~~--~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGAD-IVLNGFGDA--AEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAV 78 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEECCSCH--HHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCcH--HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 47899999999999999999999999996 899998742 2223333333 345889999999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+++|+||++|||||+...+++.+++.++|+++++.|+.|++++.+++.+++. ..+.+|++||+++..|.++++.|+++
T Consensus 79 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~as 158 (260)
T d1x1ta1 79 RQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAA 158 (260)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhh
Confidence 7799999999999999999999999999999999999999999998876653 45899999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCC----eEEEEcccc
Q psy1119 935 NSIMERICEARRAEGLP----GLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~Glp----~~ai~~g~~ 960 (1392)
|+++.+|++..+.+..| +.+|..|.+
T Consensus 159 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i 188 (260)
T d1x1ta1 159 KHGVVGFTKVTALETAGQGITANAICPGWV 188 (260)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEEECCB
T ss_pred hhhHHHhHHHHHHHhchhCcEEEEEecCCC
Confidence 99999999999887443 445555544
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.91 E-value=2.1e-23 Score=232.17 Aligned_cols=179 Identities=17% Similarity=0.217 Sum_probs=154.4
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHH-hcCCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIW-KSYDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l-~~~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
..+|++|||||++|||+++|+.|+++||+ |++++|+... ..+..+++ +..|.++..++||++++++++++++++
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~Ga~-V~i~~r~~~~---~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAGCS-VVVASRNLEE---ASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK 78 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHH---HHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 36899999999999999999999999997 8999998432 22333333 455889999999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccc-cCCCCChhHHH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCG-RGNAGQTNYGM 933 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~-~G~~gq~~Yaa 933 (1392)
+++|+||++|||||+....++.+++.++|+++++.|+.|++++.+++.+++. ..+.+|++||+++. .+.++++.|++
T Consensus 79 ~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~a 158 (251)
T d1vl8a_ 79 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAA 158 (251)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHH
Confidence 7799999999999999999999999999999999999999999998877664 34799999998765 47889999999
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 934 ANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 934 ana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+|+++.+|++..+.+ |..+-+|..|.+.
T Consensus 159 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~ 190 (251)
T d1vl8a_ 159 SKGGVASLTKALAKEWGRYGIRVNVIAPGWYR 190 (251)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred HHHhHHHHHHHHHHHhcccCeEEEEEeeCccc
Confidence 999999999998876 5566777777663
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.91 E-value=7.4e-24 Score=236.85 Aligned_cols=179 Identities=25% Similarity=0.272 Sum_probs=152.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+|++|||||++|||+++|+.|+++||+ |++++|+....+.....+.. ...+.++..++|||+|+++++++++++ ++
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~-V~i~~r~~~~l~~~~~~~~~-~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 80 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGAK-LSLVDVSSEGLEASKAAVLE-TAPDAEVLTTVADVSDEAQVEAYVTATTER 80 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHH-HCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHh-hCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence 6899999999999999999999999997 99999985333222222222 235678999999999999999999998 77
Q ss_pred cCCccEEEECcccC-CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~-~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+|+||++|||||+. ...++.+++.++|++++++|+.|++++.+++.+++. ..+.||++||+++..+.++++.|+++|
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK 160 (258)
T d1iy8a_ 81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAK 160 (258)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHH
Confidence 99999999999986 567899999999999999999999999998866543 568999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++.+|++..+.+ |..+.+|..|.+
T Consensus 161 aal~~lt~~lA~el~~~gIrVN~i~PG~v 189 (258)
T d1iy8a_ 161 HGVVGLTRNSAVEYGRYGIRINAIAPGAI 189 (258)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSB
T ss_pred HHHHHHHHHHHHHhCccCceEEEEeeCcc
Confidence 9999999998877 455666666655
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.91 E-value=6.7e-24 Score=237.72 Aligned_cols=177 Identities=19% Similarity=0.189 Sum_probs=156.5
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+|++|||||++|||+++|+.|+++||+ |++++|+. +..++..++++..|.++..+.||++++++++++++++ ++
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~-V~~~~r~~---~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGTA-IALLDMNR---EALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 79 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 6899999999999999999999999997 88899974 3345566777888999999999999999999999998 78
Q ss_pred cCCccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+|+||++|||||+.. .+++.+++.++|+++++.|+.|++++.+++.+++ ...+.+|++||+++..|.++++.|+++|
T Consensus 80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asK 159 (260)
T d1zema1 80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSK 159 (260)
T ss_dssp HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred hCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHH
Confidence 999999999999874 4789999999999999999999999999886654 3568999999999999999999999999
Q ss_pred HHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 936 SIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
+++.+|++..+.+. ..+.+|..|.+
T Consensus 160 aal~~ltk~lA~el~~~gIrVN~I~PG~v 188 (260)
T d1zema1 160 GAIIALTETAALDLAPYNIRVNAISPGYM 188 (260)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHHhhhhCCEEEEeccCcc
Confidence 99999999998874 34555655554
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.91 E-value=1.4e-23 Score=233.84 Aligned_cols=177 Identities=19% Similarity=0.243 Sum_probs=152.7
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+|++|||||++|||+++|+.|+++||+ |++++|+. +..++..+++.. +.++.+++||++|+++++++++++ +
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~-V~~~~r~~---~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGAK-VMITGRHS---DVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEK 78 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999997 88999974 334444555544 557899999999999999999998 7
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCC---CeEEEecccccccCCCCChhHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTL---GQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l---~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
++|+||++|||||....+++.+++.++|+++++.|+.|++++.+++.+++.+. +.+|++||+++..|.++++.|+++
T Consensus 79 ~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~as 158 (251)
T d1zk4a1 79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNAS 158 (251)
T ss_dssp HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHH
Confidence 79999999999999999999999999999999999999999999886655432 489999999999999999999999
Q ss_pred HHHHHHHHHHHHHc------CCCeEEEEcccc
Q psy1119 935 NSIMERICEARRAE------GLPGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~------Glp~~ai~~g~~ 960 (1392)
|+++.+|++..+.+ |..+-+|..|.+
T Consensus 159 Kaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i 190 (251)
T d1zk4a1 159 KGAVRIMSKSAALDCALKDYDVRVNTVHPGYI 190 (251)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEEECCB
T ss_pred HHHHhcchHHHHHHHhcCCCcEEEEEEeCCCC
Confidence 99999999987654 344556665554
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=8.8e-24 Score=234.10 Aligned_cols=174 Identities=22% Similarity=0.253 Sum_probs=151.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
++|++|||||++|||+++|+.|+++|++ |++++|+. +..++..+++ +.++..+.||++++++++++++++ ++
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~G~~-Vv~~~r~~---~~l~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAARGAK-VIGTATSE---NGAQAISDYL---GANGKGLMLNVTDPASIESVLEKIRAE 75 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESSH---HHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEeCCH---HHHHHHHHHh---CCCCcEEEEEecCHHHhhhhhhhhhcc
Confidence 6899999999999999999999999997 88889984 2233333444 556788999999999999999998 77
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|+||++|||||.....++.+++.++|+++++.|+.|++++.+++.+++. ..+.||++||+++..|.++++.|+++|+
T Consensus 76 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa 155 (243)
T d1q7ba_ 76 FGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKA 155 (243)
T ss_dssp TCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred cCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999998877652 4589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++.+|++..+.+ |..+-+|..|.+
T Consensus 156 al~~lt~~lA~ela~~gIrVN~I~PG~i 183 (243)
T d1q7ba_ 156 GLIGFSKSLAREVASRGITVNVVAPGFI 183 (243)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHhCccCeEEEEEecceE
Confidence 999999998877 444556666654
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.91 E-value=1.7e-23 Score=234.05 Aligned_cols=178 Identities=19% Similarity=0.204 Sum_probs=157.7
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+|++|||||++|||+++|+.|+++||+ |++++|+. +..++..++++..|.++.+++||++|+++++++++++ +
T Consensus 6 L~GK~alITGas~GIG~aia~~la~~Ga~-V~~~~r~~---~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGIVEELASLGAS-VYTCSRNQ---KELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVAN 81 (259)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999997 88899974 3445566778888999999999999999999999998 6
Q ss_pred hcC-CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KLG-PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~g-~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
+++ +||++|||||+....++.+++.|+|+++++.|+.|++++.+++.+++ ...+.+|++||+++..+.++++.|+++
T Consensus 82 ~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as 161 (259)
T d2ae2a_ 82 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGAT 161 (259)
T ss_dssp HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHH
Confidence 776 89999999999999999999999999999999999999999887765 345899999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCC----eEEEEcccc
Q psy1119 935 NSIMERICEARRAEGLP----GLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~Glp----~~ai~~g~~ 960 (1392)
|+++.+|++..+.+..| +-+|..|.+
T Consensus 162 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i 191 (259)
T d2ae2a_ 162 KGAMDQLTRCLAFEWAKDNIRVNGVGPGVI 191 (259)
T ss_dssp HHHHHHHHHHHHHHTGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHHHhCcCceEEEEeeeCcc
Confidence 99999999999887544 445555544
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.90 E-value=1.2e-23 Score=232.58 Aligned_cols=175 Identities=15% Similarity=0.109 Sum_probs=151.4
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++|++|||||++|||+++|+.|+++|++ |++++|+. +..++..++ .+.++..++||++|+++++++++++ +
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~-V~~~~r~~---~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 76 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGAK-VVFGDILD---EEGKAMAAE---LADAARYVHLDVTQPAQWKAAVDTAVT 76 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHH---TGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHH---hhCcceEEEeecCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999997 89999984 223333333 3567888999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||++|||||+....++.+++.++|+++++.|+.|++++.+.+.+++. ..+.||++||+++..|.++++.|+++|
T Consensus 77 ~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK 156 (244)
T d1nffa_ 77 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATK 156 (244)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred HhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHH
Confidence 799999999999999999999999999999999999999999987755543 458999999999999999999999999
Q ss_pred HHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 936 SIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
+++.+|++..+.+. ..+-+|..|.+
T Consensus 157 aal~~ltk~lA~el~~~gIrVN~I~PG~i 185 (244)
T d1nffa_ 157 FAVRGLTKSTALELGPSGIRVNSIHPGLV 185 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred HHHHHHHHHHHHHhcccCEEEEEEeeCCc
Confidence 99999999998774 44555555544
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.90 E-value=6.5e-24 Score=241.36 Aligned_cols=208 Identities=19% Similarity=0.148 Sum_probs=152.3
Q ss_pred CCCCceeEeecC--CCccccccHHHHhhcCCceEEEecC------CC-----CCCCCHHHHHHHHHHHHhhhccCCCCcE
Q psy1119 1154 VGNNNTIFMVPG--IEGIATVLEPLAKNINAQVLVFQFD------HT-----NPPDTIPEMADSLLPHFKKRLVHGTDEI 1220 (1392)
Q Consensus 1154 ~g~~~pLF~vp~--agG~~~~y~~La~~L~~~~~v~~l~------~e-----~~~~sieelA~~y~~~I~~~q~qp~gPy 1220 (1392)
++.++||||||+ ++|++++|.+|++.|..++.||+++ .+ +.+.|+++||+.|++.|++.+ +.+||
T Consensus 57 ~~~~~~l~c~~~~~~~g~~~~y~~la~~L~~~~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~~--~~~P~ 134 (283)
T d2h7xa1 57 AEGRAVLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAA--GDAPV 134 (283)
T ss_dssp -CCCCEEEEECCCCTTCSTTTTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHH--TTSCE
T ss_pred CCCCceEEEeCCCCCCCCHHHHHHHHHhcCCCceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHHHhc--CCCce
Confidence 455689999998 6789999999999999888888876 11 223699999999999998654 89999
Q ss_pred EEEeechhHHHHHHHHHHHHH-cCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHHH
Q psy1119 1221 KLVGFSFGGMVALELAIKLEQ-LGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAY 1298 (1392)
Q Consensus 1221 ~L~G~S~Gg~VA~EmA~~Le~-~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 1298 (1392)
+|+||||||+||||+|++|++ .|..| .|+|+|++++........ +.............. ..+... +..+.
T Consensus 135 vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~----l~a~~ 206 (283)
T d2h7xa1 135 VLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEV---WSRQLGEGLFAGELE-PMSDAR----LLAMG 206 (283)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHH---THHHHHHHHHHTCSS-CCCHHH----HHHHH
T ss_pred EEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhh---hhhhhHHHhhccccc-ccccHH----HHHHH
Confidence 999999999999999999976 57878 899999987653221111 111111111111111 112222 23345
Q ss_pred HHHHhhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEccCccccccChHHHHHHHhhhcccC
Q psy1119 1299 KRITSILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDSTDF 1375 (1392)
Q Consensus 1299 ~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~~~L~ 1375 (1392)
..+++...|++. ++++|++++++++|. ...+...+|++++.+.++++.++|+||+|+++ +...++..|+..|+
T Consensus 207 ~~~~~~~~~~~~---~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~~~~~~~~v~G~H~~ml~e-~~~~vA~~i~~~L~ 280 (283)
T d2h7xa1 207 RYARFLAGPRPG---RSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADVPGDHFTMMRD-HAPAVAEAVLSWLD 280 (283)
T ss_dssp HHHHHHHSCCCC---CCCSCEEEEEESSCSSCCCGGGCCCSCCCSSCSEEEEESSCTTHHHHT-THHHHHHHHHHHHH
T ss_pred HHHHHHhhcccc---ccCCCeEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEEcCCCcccccC-CHHHHHHHHHHHHH
Confidence 556677788776 799999999999987 56677789999999999999999999999874 44556666665553
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.90 E-value=1.4e-23 Score=233.69 Aligned_cols=175 Identities=24% Similarity=0.207 Sum_probs=153.1
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+|++|||||++|||+++|+.|+++||+ |++++|+. +..+ +..++.|.++.+++||++++++++++++++ +
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~-V~~~~r~~---~~~~---~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 75 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGAEAARQAVAAGAR-VVLADVLD---EEGA---ATARELGDAARYQHLDVTIEEDWQRVVAYARE 75 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHH---HHHHTTGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCE-EEEEECCH---HHHH---HHHHHhCCceEEEEcccCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999997 89999984 2222 333455778999999999999999999998 7
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||++|||||+....++.+++.++|+++++.|+.|++++.+++.+++. +.+.||++||+++..+.++++.|+++|
T Consensus 76 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asK 155 (254)
T d1hdca_ 76 EFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASK 155 (254)
T ss_dssp HHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred HcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHH
Confidence 799999999999999999999999999999999999999999998866542 458999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++.+|++..+.+ |..+-+|..|.+
T Consensus 156 aal~~lt~~lA~e~a~~gIrVN~I~PG~v 184 (254)
T d1hdca_ 156 WGVRGLSKLAAVELGTDRIRVNSVHPGMT 184 (254)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHHhCCCceEEEEeeeCcc
Confidence 9999999999877 444556665554
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.90 E-value=2.8e-24 Score=229.14 Aligned_cols=179 Identities=15% Similarity=0.229 Sum_probs=148.8
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEE-cCCchHHHHHHHHHHHcCCEEEEEecChhhH----HHHHHHCCC
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIH-AGSGGVGQAAINLARYMDAEIFTTVGTPEKR----EFIRKTFPF 612 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~-ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~----~~l~~~~p~ 612 (1392)
+|++|||++|++++|||++|...+++++|++|+|+ ||+|+||++++|+||++||+|+++++++++. +++++
T Consensus 1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~---- 76 (189)
T d1gu7a2 1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKE---- 76 (189)
T ss_dssp CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHH----
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhh----
Confidence 68999999999999999999999999999999986 7889999999999999999999999765544 45554
Q ss_pred CCcCceeeCCC---ccHHHHHHHHc--CCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCc
Q psy1119 613 IKEENIGNSRD---TSFEQLVMKRT--KGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRET 687 (1392)
Q Consensus 613 l~~~~i~~s~~---~~~~~~i~~~T--~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~ 687 (1392)
+|+++++++++ .++.+.+++.+ .|+|+|+|||+++++.+..++++|+++||+|.+|.............++.|++
T Consensus 77 lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~ 156 (189)
T d1gu7a2 77 LGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNF 156 (189)
T ss_dssp HTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCC
T ss_pred ccccEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCc
Confidence 78999998753 34566666654 46789999999999999999999999999999996543332222334556899
Q ss_pred EEEEEechhhhhhCHHHHHHHHHHHHHHHHcCC
Q psy1119 688 SFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGA 720 (1392)
Q Consensus 688 s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 720 (1392)
++.|+.+..+....++...+.++.+.+++++|+
T Consensus 157 ~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk 189 (189)
T d1gu7a2 157 TSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK 189 (189)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence 999999888888888888888888888888875
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.90 E-value=1.7e-23 Score=234.09 Aligned_cols=178 Identities=16% Similarity=0.213 Sum_probs=143.0
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++|++|||||++|||+++|+.|+++||+ |++++|+. +..++..++++..+.++..+.||++++++++++++++ +
T Consensus 6 LkgK~alVTGas~GIG~aiA~~la~~Ga~-V~~~~r~~---~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (259)
T d1xq1a_ 6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAV-IHTCARNE---YELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS 81 (259)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence 47999999999999999999999999996 88899984 3345556677778889999999999999999999998 6
Q ss_pred hc-CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KL-GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~-g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
++ |+||++|||||+....++.+++.++|+++++.|+.|++++.+++.+++. ..+.||++||+++..+.++++.|+++
T Consensus 82 ~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~as 161 (259)
T d1xq1a_ 82 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSAT 161 (259)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHH
T ss_pred HhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccccc
Confidence 67 7999999999999999999999999999999999999999998877653 45899999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
|+++.+|++..+.+ |..+-+|..|.+
T Consensus 162 Kaal~~lt~~lA~e~~~~gIrVN~V~PG~i 191 (259)
T d1xq1a_ 162 KGALNQLARNLACEWASDGIRANAVAPAVI 191 (259)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEECCSC
T ss_pred ccchhhhhHHHHHHhcccCeEEEEeccCcc
Confidence 99999999998877 455667766655
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=1.5e-23 Score=231.91 Aligned_cols=178 Identities=14% Similarity=0.032 Sum_probs=156.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+|++|||||++|||+++|+.|+++|++ |++++|+. +..++..++++..|.++..+.||++|+++++++++++ +
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la~~G~~-V~l~~r~~---~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~ 80 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFAKLKSK-LVLWDINK---HGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA 80 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 89999984 3344556667788999999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||++|||||......+.+.+.++|+++++.|+.|++++.+++.+.+. +.++||++||+++..|.++++.|+++|
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK 160 (244)
T d1yb1a_ 81 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK 160 (244)
T ss_dssp HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred HcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHH
Confidence 799999999999999999999999999999999999999999998866553 447899999999999999999999999
Q ss_pred HHHHHHHHHHHHc-------CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE-------GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~-------Glp~~ai~~g~~ 960 (1392)
+++.+|++..+.+ |....+|..|.+
T Consensus 161 aal~~~~~~La~El~~~~~~gI~V~~i~PG~v 192 (244)
T d1yb1a_ 161 FAAVGFHKTLTDELAALQITGVKTTCLCPNFV 192 (244)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCC
Confidence 9999999998875 455566666644
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.90 E-value=3.2e-23 Score=230.13 Aligned_cols=172 Identities=18% Similarity=0.138 Sum_probs=148.7
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++|++|||||++|||+++|+.|+++|++ |++++|+... .+..+. .+. .+++|||+|+++++++++++ +
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~-V~~~~~~~~~----~~~~~~---~~~--~~~~~Dv~~~~~v~~~~~~~~~ 72 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGAL-VALCDLRPEG----KEVAEA---IGG--AFFQVDLEDERERVRFVEEAAY 72 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSTTH----HHHHHH---HTC--EEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHH----HHHHHH---cCC--eEEEEeCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999997 8889998532 222222 233 45789999999999999998 7
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||++|||||+...+++.+++.|+|+++++.|+.|++++.+++.+++. +.+.||++||+++..|.++++.|+++|
T Consensus 73 ~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK 152 (248)
T d2d1ya1 73 ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASK 152 (248)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHH
T ss_pred hcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHH
Confidence 799999999999999999999999999999999999999999999877663 357999999999999999999999999
Q ss_pred HHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 936 SIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
+++.+|++..+.+. ..+-+|..|.+
T Consensus 153 aal~~ltk~lA~el~~~gIrVN~I~PG~v 181 (248)
T d2d1ya1 153 GGLVNLTRSLALDLAPLRIRVNAVAPGAI 181 (248)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEeeCCC
Confidence 99999999988774 44555655554
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.90 E-value=6.8e-24 Score=222.24 Aligned_cols=158 Identities=25% Similarity=0.380 Sum_probs=129.5
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCc
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEEN 617 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~ 617 (1392)
+|+||||++|++++|||+++. .++++|||+|||+||+|+||++++|+|+++||+|++++++++|++++++ +|+++
T Consensus 1 ls~eeAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~----lGa~~ 75 (171)
T d1iz0a2 1 LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----LGAEE 75 (171)
T ss_dssp CCHHHHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----TTCSE
T ss_pred CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc----cccce
Confidence 689999999999999999995 5899999999999999999999999999999999999999999999987 78999
Q ss_pred eeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhh
Q psy1119 618 IGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNF 697 (1392)
Q Consensus 618 i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~ 697 (1392)
++|+.+ .+.+.|.++|+|+|||+.| +.+..++++++++|+++.+|..+........+.++.|++++.|+.+..+
T Consensus 76 ~i~~~~-----~~~~~~~~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~~~ 149 (171)
T d1iz0a2 76 AATYAE-----VPERAKAWGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPL 149 (171)
T ss_dssp EEEGGG-----HHHHHHHTTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHH
T ss_pred eeehhh-----hhhhhhccccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCcCh
Confidence 998753 3456677889999999876 5789999999999999999976544434444567889999999987765
Q ss_pred hhhCHHHHHH
Q psy1119 698 FFAEQEWKMS 707 (1392)
Q Consensus 698 ~~~~~~~~~~ 707 (1392)
.+ .++..++
T Consensus 150 ~~-~~~~~~~ 158 (171)
T d1iz0a2 150 LR-EGALVEE 158 (171)
T ss_dssp TT-CHHHHHH
T ss_pred hh-hHHHHHH
Confidence 44 3433333
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.90 E-value=2.3e-23 Score=220.66 Aligned_cols=169 Identities=17% Similarity=0.269 Sum_probs=145.2
Q ss_pred hhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCC
Q psy1119 544 ATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRD 623 (1392)
Q Consensus 544 A~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~ 623 (1392)
++++++++|||++|.+.+++++||+||||||+|+||++++|+|+..||+||+|+++++|.+++++ +++++++++++
T Consensus 8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~----~Ga~~vi~~~~ 83 (182)
T d1v3va2 8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----IGFDAAFNYKT 83 (182)
T ss_dssp TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCSEEEETTS
T ss_pred HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh----hhhhhhccccc
Confidence 57889999999999999999999999999999999999999999999999999999999999987 78999999999
Q ss_pred ccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCc------cccccccCCCcEEEEEechhh
Q psy1119 624 TSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNN------MLGMEVFMRETSFHGVMLDNF 697 (1392)
Q Consensus 624 ~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~------~l~~~~~~k~~s~~g~~~~~~ 697 (1392)
+++.+.+++.+.++|+|+|||+++++.++.+++|++++|+++.+|........ .....++.|++++.|+.+..+
T Consensus 84 ~~~~~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~ 163 (182)
T d1v3va2 84 VNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRW 163 (182)
T ss_dssp CSCHHHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGC
T ss_pred ccHHHHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEecc
Confidence 99999999999999999999999999999999999999999999965432111 111245678999999875543
Q ss_pred hhhCHHHHHHHHHHHHHHHHcC
Q psy1119 698 FFAEQEWKMSLQKALQKAIDAG 719 (1392)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~l~~g 719 (1392)
.++..++.++.+.+++++|
T Consensus 164 ---~~~~~~~~~~~l~~~i~~G 182 (182)
T d1v3va2 164 ---QGDVREKALRDLMKWVLEG 182 (182)
T ss_dssp ---CHHHHHHHHHHHHHHHHTT
T ss_pred ---ChHHHHHHHHHHHHHHhCc
Confidence 3455566677777777765
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.90 E-value=3.1e-23 Score=231.65 Aligned_cols=175 Identities=18% Similarity=0.193 Sum_probs=150.6
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++|++|||||++|||+++|+.|+++|++ |++++|+. +..++..++ .|.++..++||++++++++++++++ +
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~-V~~~~r~~---~~l~~~~~~---~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 75 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVREGAR-VAIADINL---EAARATAAE---IGPAACAIALDVTDQASIDRCVAELLD 75 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHTTEE-EEEEESCH---HHHHHHHHH---HCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHH---hCCceEEEEeeCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999997 88899973 233333343 3778999999999999999999998 7
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhh-hCC--CCCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRT-MCP--TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~-~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
++|+||++|||||+...+++.+++.++|+++++.|+.|++++.+++.+ +++ ..+.||++||+++..|.++++.|+++
T Consensus 76 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as 155 (256)
T d1k2wa_ 76 RWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCAT 155 (256)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhh
Confidence 799999999999999999999999999999999999999999987644 332 35899999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCC----eEEEEcccc
Q psy1119 935 NSIMERICEARRAEGLP----GLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~Glp----~~ai~~g~~ 960 (1392)
|+++.+|++..+.+..| +-+|..|.+
T Consensus 156 Kaal~~lt~~lA~el~~~gIrVN~V~PG~i 185 (256)
T d1k2wa_ 156 KAAVISLTQSAGLNLIRHGINVNAIAPGVV 185 (256)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred hhHHHHHHHHHHHHhcccCeEEEEEecCCC
Confidence 99999999998877444 445555443
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.89 E-value=4.9e-23 Score=227.05 Aligned_cols=167 Identities=21% Similarity=0.277 Sum_probs=137.4
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+|++|||||++|||+++|+.|+++|++ |++++|+... ..++..++||++|+++++++++++ +
T Consensus 5 l~gK~~lITGas~GIG~aia~~la~~Ga~-V~~~~r~~~~--------------~~~~~~~~~Dv~~~~~v~~~~~~~~~ 69 (237)
T d1uzma1 5 FVSRSVLVTGGNRGIGLAIAQRLAADGHK-VAVTHRGSGA--------------PKGLFGVEVDVTDSDAVDRAFTAVEE 69 (237)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSSCC--------------CTTSEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCcch--------------hcCceEEEEecCCHHHHHHHHHHHHH
Confidence 37899999999999999999999999997 8889998532 224567899999999999999998 7
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
++|+||++|||||+....++.+++.|+|+++++.|+.|++++.+++.+++ .+.+.||++||+++..|.++++.|+++|
T Consensus 70 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 149 (237)
T d1uzma1 70 HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASK 149 (237)
T ss_dssp HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHH
T ss_pred hcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHH
Confidence 79999999999999999999999999999999999999999998776554 3447999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++.+|++..+.+ |..+-+|..|.+
T Consensus 150 aal~~lt~~lA~e~~~~gIrVN~I~PG~v 178 (237)
T d1uzma1 150 AGVIGMARSIARELSKANVTANVVAPGYI 178 (237)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHhhhhcCCceeeeeeeCcC
Confidence 9999999998876 444556666654
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.89 E-value=2.8e-22 Score=221.68 Aligned_cols=172 Identities=20% Similarity=0.184 Sum_probs=142.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+|++|||||++|||+++|+.|+++|++ |++++|+.. ..++.. +..+ +..++||++|+++++++++++ ++
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~G~~-V~~~~r~~~---~l~~~~---~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~ 74 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKEGAR-LVACDIEEG---PLREAA---EAVG--AHPVVMDVADPASVERGFAEALAH 74 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHH---HTTT--CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHH---HHHHHH---HHcC--CeEEEEecCCHHHHHHHHHHHHHh
Confidence 6899999999999999999999999997 888999832 222222 2333 456899999999999999998 77
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC-CCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT-LGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~-l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+|+||++|||||+...+++.+++.++|+++++.|+.|++++.+++.+++.+ .+-.|.++|.++..+.++++.|+++|++
T Consensus 75 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~~~~~Y~asKaa 154 (242)
T d1ulsa_ 75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAG 154 (242)
T ss_dssp HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTCHHHHHHHHH
T ss_pred cCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCCCCcchHHHHHH
Confidence 999999999999999999999999999999999999999999988766543 3344444444678899999999999999
Q ss_pred HHHHHHHHHHcCC----CeEEEEcccc
Q psy1119 938 MERICEARRAEGL----PGLAVEWGAV 960 (1392)
Q Consensus 938 ld~la~~r~~~Gl----p~~ai~~g~~ 960 (1392)
+.+|++..+.+.. .+-+|..|.+
T Consensus 155 l~~ltk~lA~ela~~gIrVN~I~PG~v 181 (242)
T d1ulsa_ 155 VVGLTRTLALELGRWGIRVNTLAPGFI 181 (242)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHhhhCcEEEEEeeCcc
Confidence 9999999887744 4555665555
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=5.8e-23 Score=228.19 Aligned_cols=173 Identities=20% Similarity=0.229 Sum_probs=148.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+|++|||||++|||+++|+.|+++||+ |++++|+. +..++ +.+...++.++.||++|+++++++++++ ++
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~Ga~-V~i~~r~~---~~~~~----~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~ 76 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFVNSGAR-VVICDKDE---SGGRA----LEQELPGAVFILCDVTQEDDVKTLVSETIRR 76 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHH----HHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCH---HHHHH----HHHhcCCCeEEEccCCCHHHHHHHHHHHHHh
Confidence 6899999999999999999999999997 88899873 22222 2222345788999999999999999998 78
Q ss_pred cCCccEEEECcccC-CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVL-KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~-~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
+|+||++|||||+. ...++++++.++|+++++.|+.|++++.+++.+++. ..+.+|++||+++..+.++++.|+++|+
T Consensus 77 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa 156 (250)
T d1ydea1 77 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKG 156 (250)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred cCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCcchhHHHHh
Confidence 99999999999976 456799999999999999999999999998877653 3489999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++.+|++..+.+ |..+-+|..|.+
T Consensus 157 al~~lt~~lA~e~a~~gIrVN~I~PG~i 184 (250)
T d1ydea1 157 AVTAMTKALALDESPYGVRVNCISPGNI 184 (250)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSB
T ss_pred hHHHHHHHHHHHhcccCeEEEEEeeCCC
Confidence 999999998877 455667776665
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.89 E-value=1.4e-22 Score=225.59 Aligned_cols=176 Identities=18% Similarity=0.196 Sum_probs=152.5
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++|++|||||++|||+++|+.|+++|++ |++++|+. +..++..+++ |.++..++||++++++++++++++ +
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~Ga~-V~~~~~~~---~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~ 76 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLEVVKLLLGEGAK-VAFSDINE---AAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQR 76 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEECSCH---HHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999997 88999874 2233333443 667888999999999999999998 7
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
++|+||++|||||+....++.+++.++|+++++.|+.|++++.+++.+++. ..+.||++||+++..+.++++.|+++|+
T Consensus 77 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa 156 (253)
T d1hxha_ 77 RLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKA 156 (253)
T ss_dssp HHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred HhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccccccccchhH
Confidence 799999999999999999999999999999999999999999998877664 4589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----C--CCeEEEEccccC
Q psy1119 937 IMERICEARRAE----G--LPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----G--lp~~ai~~g~~~ 961 (1392)
++.+|++..+.+ | ..+-+|..|.+.
T Consensus 157 al~~lt~~lA~e~~~~g~~IrVN~I~PG~i~ 187 (253)
T d1hxha_ 157 AVSALTRAAALSCRKQGYAIRVNSIHPDGIY 187 (253)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEEEESEEC
T ss_pred HHHHHHHHHHHHHhhcCCCEEEEEEeECCCc
Confidence 999999987765 3 345566666553
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=1.1e-21 Score=218.95 Aligned_cols=221 Identities=15% Similarity=0.145 Sum_probs=168.5
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCC--ceEEEEeccCCCHHHHHHHHHH
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYD--VQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G--~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
..++|++|||||++|||+++|+.|+++|++ |++++|+. +..++..+++++.| .++..++||++++++++++++.
T Consensus 7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~-Vv~~~r~~---~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~ 82 (257)
T d1xg5a_ 7 RWRDRLALVTGASGGIGAAVARALVQQGLK-VVGCARTV---GNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA 82 (257)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHH
Confidence 357999999999999999999999999996 88899984 33444556666554 6889999999999999999999
Q ss_pred H-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC----CCCCeEEEecccccccC--CCCC
Q psy1119 856 A-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC----PTLGQFVVFSSVSCGRG--NAGQ 928 (1392)
Q Consensus 856 ~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~----~~l~~fV~~SS~s~~~G--~~gq 928 (1392)
+ +++|+||++|||||.....++.+++.++|+.+++.++.|++++.+.+.+.+ ...+++|++||+++..+ .++.
T Consensus 83 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~ 162 (257)
T d1xg5a_ 83 IRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVT 162 (257)
T ss_dssp HHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGG
T ss_pred HHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCccc
Confidence 8 779999999999999999999999999999999999999999988775432 23589999999998754 5667
Q ss_pred hhHHHHHHHHHHHHHHHHHc------CCCeEEEEccccCccccccchhhhhHHH---HHcCccccchhhhHHHHHHHHcc
Q psy1119 929 TNYGMANSIMERICEARRAE------GLPGLAVEWGAVGEVGLVADMAEDNLEV---VIGGTLQQRISNCLECLNEFLIQ 999 (1392)
Q Consensus 929 ~~Yaaana~ld~la~~r~~~------Glp~~ai~~g~~~~~G~~~~~~~~~~~~---~~~g~~~~~~~~~l~~l~~~l~~ 999 (1392)
..|+++|+++.+|++..+.+ |..+.+|..|.+.. .+.........+. .........+++..+.+..+++.
T Consensus 163 ~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t-~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~ 241 (257)
T d1xg5a_ 163 HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVET-QFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLST 241 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCS-SHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCC-hhhhhcChhhHHHHHhcCCCCCCcCHHHHHHHHHHHhCC
Confidence 88999999999999988754 45566777776643 2322221111111 11112234566677766666655
Q ss_pred CCCe
Q psy1119 1000 SEPI 1003 (1392)
Q Consensus 1000 ~~~~ 1003 (1392)
+...
T Consensus 242 ~a~~ 245 (257)
T d1xg5a_ 242 PAHI 245 (257)
T ss_dssp CTTE
T ss_pred hhcC
Confidence 5433
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.88 E-value=2.9e-22 Score=218.43 Aligned_cols=213 Identities=15% Similarity=0.132 Sum_probs=158.2
Q ss_pred CCCCceeEeecCCCccccccHHHHhhcCCceEEEecCCCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHHH
Q psy1119 1154 VGNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVAL 1233 (1392)
Q Consensus 1154 ~g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA~ 1233 (1392)
++.+++|||||+++|++..|.+|+++|+ ...++..+ ..+.+++|++|++.|++. ++.+||+|+||||||.||+
T Consensus 14 ~~~~~~l~~lhg~~g~~~~~~~la~~L~-~~~v~~~~----~~g~~~~a~~~~~~i~~~--~~~~~~~lvGhS~GG~vA~ 86 (230)
T d1jmkc_ 14 QDQEQIIFAFPPVLGYGLMYQNLSSRLP-SYKLCAFD----FIEEEDRLDRYADLIQKL--QPEGPLTLFGYSAGCSLAF 86 (230)
T ss_dssp TTCSEEEEEECCTTCCGGGGHHHHHHCT-TEEEEEEC----CCCSTTHHHHHHHHHHHH--CCSSCEEEEEETHHHHHHH
T ss_pred CCCCCeEEEEcCCCCCHHHHHHHHHHCC-CCEEeccC----cCCHHHHHHHHHHHHHHh--CCCCcEEEEeeccChHHHH
Confidence 4556899999999999999999999996 45566654 235678999999999865 4889999999999999999
Q ss_pred HHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCc-cccCCHHHHHHHHHHHHHHHHhhccccCCC
Q psy1119 1234 ELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPE-DATHSRTYQRNLAHAAYKRITSILKYTDPK 1311 (1392)
Q Consensus 1234 EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~y~~~~ 1311 (1392)
|+|+++.+++..+ .|+++++.++.......... .......+.+.... ....++.....+...++..+.....+.+.
T Consensus 87 ~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 164 (230)
T d1jmkc_ 87 EAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRT-VESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYSYYVNLIST- 164 (230)
T ss_dssp HHHHHHHHTTCCEEEEEEESCCEECCCC---------CCHHHHHHHTTTCSGGGSHHHHHHHHHHHHHHHHHHHHCCCC-
T ss_pred HHHHhhhhhCccceeeecccccCccchhhhhhhh-hhhhhhhhhhccccccccccHHHHHHHHHHHHHHHHhhhccccc-
Confidence 9999999999988 66788876554322221111 01111222222221 22234555555556666665555555544
Q ss_pred CCcccceEEEEeeCCCCCCChhhcCcccccCCCeEEEEEccCccccccChHHHHHHHhhhcccCC
Q psy1119 1312 HKAFGGNITLLRPTEQALPTAEDYGLSKVCKKPVKVHFVDGNHFTVLDNIKSAQIIMHEDSTDFK 1376 (1392)
Q Consensus 1312 ~~~~~~pi~l~~a~~~~~~~~~~~~W~~~~~g~v~v~~v~G~H~~ml~~~~~~~i~~~l~~~L~~ 1376 (1392)
.++++|++++++++|.........|.+++.+.++++.++|+|+.|+++|+...++..|.+.|++
T Consensus 165 -~~i~~p~l~i~g~~D~~~~~~~~~w~~~~~~~~~~~~i~g~H~~ml~~~~~~~va~~I~~~L~~ 228 (230)
T d1jmkc_ 165 -GQVKADIDLLTSGADFDIPEWLASWEEATTGAYRMKRGFGTHAEMLQGETLDRNAGILLEFLNT 228 (230)
T ss_dssp -SCBSSEEEEEECSSCCCCCTTEECSGGGBSSCEEEEECSSCGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred -ccccCcceeeeecCCcccchhHHHHHHhccCCcEEEEEcCCChhhcCCccHHHHHHHHHHHHhh
Confidence 3899999999999988445677899999999999999999999999999999999999988876
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.88 E-value=6.7e-22 Score=221.47 Aligned_cols=179 Identities=23% Similarity=0.240 Sum_probs=150.6
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+|++|||||++|||+++|+.|+++||+ |++++|+........+ +..+..|.++..++||++++++++++++++ +
T Consensus 7 l~gK~alITGas~GIG~aia~~la~~Ga~-V~i~~r~~~~~~~~~~--~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (260)
T d1h5qa_ 7 FVNKTIIVTGGNRGIGLAFTRAVAAAGAN-VAVIYRSAADAVEVTE--KVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA 83 (260)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEE-EEEEESSCTTHHHHHH--HHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHH--HHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 9999998654333222 223456889999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC---CCCCeEEEeccccccc-------CCCC
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC---PTLGQFVVFSSVSCGR-------GNAG 927 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~---~~l~~fV~~SS~s~~~-------G~~g 927 (1392)
++|+||++|||||+....++.+++.++|+++++.|+.|++++.+++.+++ ...+.+++.||..... +.++
T Consensus 84 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~ 163 (260)
T d1h5qa_ 84 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLT 163 (260)
T ss_dssp HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECS
T ss_pred HhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCcc
Confidence 79999999999999999999999999999999999999999998876544 3457788888876553 4578
Q ss_pred ChhHHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 928 QTNYGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 928 q~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++.|+++|+++.+|++..+.+ |..+-+|..|.+
T Consensus 164 ~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i 200 (260)
T d1h5qa_ 164 QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYV 200 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred ccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcc
Confidence 999999999999999998766 455666666665
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.88 E-value=5.2e-22 Score=219.50 Aligned_cols=180 Identities=21% Similarity=0.265 Sum_probs=148.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+|++|||||++|||+++|+.|+++|++ |++++|+.. ...+..++.|.++.+++||++++++++++++++ +
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~-V~~~~r~~~------~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~ 75 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGAS-LVAVDREER------LLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALE 75 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHH------HHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHH------HHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 888999842 223445567889999999999999999999998 6
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
++|+||++|||||.....++.+++.++|+++++.++.+.+++.+++.+++.+.+.++++||. +..+.+++..|+++|++
T Consensus 76 ~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~-a~~~~~~~~~Y~~sK~a 154 (241)
T d2a4ka1 76 EFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV-AGLGAFGLAHYAAGKLG 154 (241)
T ss_dssp HHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC-TTCCHHHHHHHHHCSSH
T ss_pred HhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccc-ccccccCccccchhhHH
Confidence 79999999999999999999999999999999999999999999988887666666655554 55566899999999999
Q ss_pred HHHHHHHHHHc----CCCeEEEEccccCcccccc
Q psy1119 938 MERICEARRAE----GLPGLAVEWGAVGEVGLVA 967 (1392)
Q Consensus 938 ld~la~~r~~~----Glp~~ai~~g~~~~~G~~~ 967 (1392)
+++|+++.+.+ |..+-+|..|.+. +.|..
T Consensus 155 l~~lt~~lA~el~~~gIrvN~I~PG~v~-T~~~~ 187 (241)
T d2a4ka1 155 VVGLARTLALELARKGVRVNVLLPGLIQ-TPMTA 187 (241)
T ss_dssp HHHHHHHHHHHHTTTTCEEEEEEECSBC-CGGGT
T ss_pred HHHHHHHHHHHHhHhCCEEeeeccCcCC-CHHHH
Confidence 99999999887 4456677777663 34443
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.88 E-value=6.6e-22 Score=220.89 Aligned_cols=178 Identities=18% Similarity=0.245 Sum_probs=157.7
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+|++|||||++|||+++|+.|+++|++ |++++|+. +..++..++++..|..+.++.||++++++++++++++ +
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~-V~i~~r~~---~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~ 79 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGLGAR-VYTCSRNE---KELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH 79 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHH
Confidence 47999999999999999999999999996 99999984 3445566778888999999999999999999999998 5
Q ss_pred hc-CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KL-GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~-g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
++ +++|.+|||||.....++.+++.++|+++++.|+.+++++.+++.+.+ +..+.+|++||+++..|.+++..|+++
T Consensus 80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~s 159 (258)
T d1ae1a_ 80 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSAS 159 (258)
T ss_dssp HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHH
Confidence 67 699999999999999999999999999999999999999998876544 356899999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
|+++.+|++..+.+ |..+-+|..|.+
T Consensus 160 K~al~~lt~~lA~el~~~gIrvN~I~PG~i 189 (258)
T d1ae1a_ 160 KGAINQMTKSLACEWAKDNIRVNSVAPGVI 189 (258)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHHHhcCcCcEEEEEEeeCcc
Confidence 99999999999877 444556666555
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.88 E-value=2.7e-22 Score=226.20 Aligned_cols=179 Identities=23% Similarity=0.255 Sum_probs=148.8
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCC---ceEEEEeccCCCHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYD---VQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G---~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
..+|++|||||++|||+++|+.|+++|++ |++++|+.. ..++..+++++.| .++..++||+++++++++++++
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~-V~l~~r~~~---~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~ 78 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEGAN-VTITGRSSE---RLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINS 78 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCCCE-EEEEECCHH---HHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHH
Confidence 36899999999999999999999999997 999999843 3344455555543 5799999999999999999999
Q ss_pred H-hhcCCccEEEECcccCCCccc----cCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecc-cccccCCCCC
Q psy1119 856 A-NKLGPVDGIFNLAVVLKDALF----ENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSS-VSCGRGNAGQ 928 (1392)
Q Consensus 856 ~-~~~g~I~gvi~~Agv~~d~~~----~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS-~s~~~G~~gq 928 (1392)
+ +++|+||++|||||+.....+ .+++.++|+++++.|+.|++++.+++.+++. ..+.+|+++| .++..|.+++
T Consensus 79 ~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~ 158 (272)
T d1xkqa_ 79 TLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDF 158 (272)
T ss_dssp HHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSS
T ss_pred HHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCc
Confidence 8 779999999999999876655 5678889999999999999999998877653 3355555555 6778899999
Q ss_pred hhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 929 TNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 929 ~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+.|+++|+++.+|++..+.+ |..+-+|..|.+.
T Consensus 159 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~ 195 (272)
T d1xkqa_ 159 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVE 195 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBC
T ss_pred chhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCc
Confidence 99999999999999998876 5556677776653
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.87 E-value=4.5e-22 Score=224.44 Aligned_cols=177 Identities=20% Similarity=0.195 Sum_probs=150.8
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCC---ceEEEEeccCCCHHHHHHHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYD---VQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G---~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
++|++|||||++|||+++|+.|+++|++ |++++|+.. ..++..+++++.| .++.++.||++++++++++++++
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~-V~~~~r~~~---~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQ-VTITGRNED---RLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT 78 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHH---HHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHH
Confidence 6899999999999999999999999997 889999843 2344445555544 47899999999999999999998
Q ss_pred -hhcCCccEEEECcccCC--CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccccCCCCChhH
Q psy1119 857 -NKLGPVDGIFNLAVVLK--DALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~--d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
+++|+||++|||||... ...+.+++.|+|+++++.|+.|++++.+++.+++ ...+.++++||+++..+.++++.|
T Consensus 79 ~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y 158 (274)
T d1xhla_ 79 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYY 158 (274)
T ss_dssp HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHH
T ss_pred HHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCcee
Confidence 77999999999999753 3466788999999999999999999999887765 345788888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 932 GMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++|+++.+|++..+.+ |..+-+|..|.+
T Consensus 159 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i 191 (274)
T d1xhla_ 159 ACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAV 191 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCB
T ss_pred hhhhhHHHHHHHHHHHHHhHhCCceeeeccCCC
Confidence 99999999999988776 556667777765
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.87 E-value=3.2e-22 Score=228.19 Aligned_cols=177 Identities=19% Similarity=0.216 Sum_probs=151.5
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCc------ccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHH
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGV------KNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNL 852 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~------~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l 852 (1392)
.++|++|||||++|||+++|+.|+++||+ |++.+|+.. .....++..+++...+.. ..+|+++.++++++
T Consensus 5 l~gKvalITGas~GIG~aiA~~la~~Ga~-Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~ 80 (302)
T d1gz6a_ 5 FDGRVVLVTGAGGGLGRAYALAFAERGAL-VVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK---AVANYDSVEAGEKL 80 (302)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE---EEEECCCGGGHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEeCCchhhhhhhhHHHHHHHHHHHhhcccc---cccccchHHHHHHH
Confidence 36899999999999999999999999997 888877542 233455566666666544 46799999999999
Q ss_pred HHHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCCh
Q psy1119 853 LTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQT 929 (1392)
Q Consensus 853 ~~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~ 929 (1392)
++.+ +++|+||++|||||+..+++|.+++.++|++++++|+.|++++.+++.+++. ..+.||++||+++..|.++++
T Consensus 81 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~ 160 (302)
T d1gz6a_ 81 VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQA 160 (302)
T ss_dssp HHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCH
T ss_pred HHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcH
Confidence 9998 7899999999999999999999999999999999999999999998877663 458999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHcCCC----eEEEEccc
Q psy1119 930 NYGMANSIMERICEARRAEGLP----GLAVEWGA 959 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~Glp----~~ai~~g~ 959 (1392)
+|+++|+++.+|++..+.+..+ +.+|..|.
T Consensus 161 ~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~ 194 (302)
T d1gz6a_ 161 NYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNA 194 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCC
Confidence 9999999999999999988554 44454443
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.87 E-value=9.6e-22 Score=221.16 Aligned_cols=177 Identities=23% Similarity=0.225 Sum_probs=150.3
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+|++|||||++|||+++|+.|+++|++ |++++|+. +..++..+++...| .+.++.||++|+++++++++++ +
T Consensus 4 L~gKvalITGas~GIG~aia~~la~~Ga~-V~i~~r~~---~~~~~~~~~l~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (268)
T d2bgka1 4 LQDKVAIITGGAGGIGETTAKLFVRYGAK-VVIADIAD---DHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIA 78 (268)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHHhcCCC-ceEEEEccCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999997 88899974 33455566676655 4677899999999999999998 7
Q ss_pred hcCCccEEEECcccCCCc--cccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCCh-hHH
Q psy1119 858 KLGPVDGIFNLAVVLKDA--LFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQT-NYG 932 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~--~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~-~Ya 932 (1392)
++|+||++|||||+.... .+.+++.++|+++++.|+.|++++.+++.+++. ..+.+|++||+++..+.++.. .|+
T Consensus 79 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~ 158 (268)
T d2bgka1 79 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYT 158 (268)
T ss_dssp HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHH
T ss_pred HcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccc
Confidence 799999999999986654 589999999999999999999999998866553 457999999999999887764 899
Q ss_pred HHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 933 MANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 933 aana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++|+++.+|++..+.+ |..+-+|..|.+
T Consensus 159 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i 190 (268)
T d2bgka1 159 ATKHAVLGLTTSLCTELGEYGIRVNCVSPYIV 190 (268)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCC
T ss_pred hhHHHHHhCHHHHHHHhChhCeEEEecCCCCc
Confidence 9999999999998877 444556666654
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.87 E-value=5.2e-22 Score=222.88 Aligned_cols=178 Identities=21% Similarity=0.244 Sum_probs=142.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCC---ceEEEEeccCCCHHHHHHHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYD---VQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G---~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
.+|++|||||++|||+++|+.|+++|++ |++++|+... .++..+++++.| .++..++||++++++++++++++
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~-V~~~~r~~~~---l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~ 79 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGAK-VTITGRHAER---LEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT 79 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCE-EEEEECCHHH---HHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHH
Confidence 6899999999999999999999999997 8999998533 334445555443 46899999999999999999998
Q ss_pred -hhcCCccEEEECcccCC----CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccc-cccCCCCCh
Q psy1119 857 -NKLGPVDGIFNLAVVLK----DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVS-CGRGNAGQT 929 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~----d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s-~~~G~~gq~ 929 (1392)
+++|+||++|||||+.. ..++.+++.|+|+++++.|+.|++++.+++.+++. ..+.+|+++|++ +..+.++++
T Consensus 80 ~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~ 159 (264)
T d1spxa_ 80 LGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFP 159 (264)
T ss_dssp HHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSH
T ss_pred HHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCch
Confidence 78999999999999853 34577889999999999999999999998877653 336677777665 577999999
Q ss_pred hHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 930 NYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
.|+++|+++.+|++..+.+ |..+-+|..|.+.
T Consensus 160 ~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~ 195 (264)
T d1spxa_ 160 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVA 195 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred hhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCC
Confidence 9999999999999998877 5556677777653
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=1.1e-21 Score=222.29 Aligned_cols=180 Identities=18% Similarity=0.098 Sum_probs=155.2
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceE--EEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKL--VLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~l--vl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
.|++|||||++|||+++|+.|+++|++.+ ..+.|+........+..+++...|.++..+.||++|.++++++++++.+
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 47899999999999999999999999832 2345554344445555666777888999999999999999999988744
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana 936 (1392)
|+||.+|||||......+.+++.++|++++++|+.|++++.+++.+++. ..+.||++||+++..|.++++.|+++|+
T Consensus 82 -g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKa 160 (285)
T d1jtva_ 82 -GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKF 160 (285)
T ss_dssp -SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHH
T ss_pred -cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHH
Confidence 8999999999999999999999999999999999999999998877653 4589999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
++.+|++..+.+ |..+.+|..|.+.
T Consensus 161 al~~l~~~la~El~~~gIrVn~V~PG~v~ 189 (285)
T d1jtva_ 161 ALEGLCESLAVLLLPFGVHLSLIECGPVH 189 (285)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHhhccCcEEEEEecCCCC
Confidence 999999999887 5667777777664
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=4.1e-21 Score=213.44 Aligned_cols=217 Identities=27% Similarity=0.409 Sum_probs=150.3
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecCCCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHHHH
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALE 1234 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA~E 1234 (1392)
++++||||||+.+|++..|.+|+++|+.+++++.+.+..+..+++++|++|++++++. .+.+||+|+||||||.||++
T Consensus 23 ~~~~Pl~l~Hg~~gs~~~~~~l~~~L~~~v~~~d~~g~~~~~~~~~~a~~~~~~~~~~--~~~~~~~lvGhS~Gg~vA~~ 100 (286)
T d1xkta_ 23 SSERPLFLVHPIEGSTTVFHSLASRLSIPTYGLQCTRAAPLDSIHSLAAYYIDCIRQV--QPEGPYRVAGYSYGACVAFE 100 (286)
T ss_dssp CCSCCEEEECCTTCCCGGGHHHHHTCSSCEEEECCCTTSCCSCHHHHHHHHHHHHHHH--CCSSCCEEEEETHHHHHHHH
T ss_pred CCCCeEEEECCCCccHHHHHHHHHHcCCeEEEEeCCCCCCCCCHHHHHHHHHHHHHHh--cCCCceEEeecCCccHHHHH
Confidence 3458999999999999999999999976655555557777889999999999999865 48899999999999999999
Q ss_pred HHHHHHHcCCcc-EEEE---EeCCCCCCccc-------cCC-------------------CCChHHHHHHHH--------
Q psy1119 1235 LAIKLEQLGTKC-HLYL---VDSAPDYVLTS-------LRK-------------------LPDWNAKLNYFL-------- 1276 (1392)
Q Consensus 1235 mA~~Le~~G~~v-~LvL---iD~~p~~~~~~-------l~~-------------------~~~~~~~l~~~~-------- 1276 (1392)
+|+++.+++..+ .+.. .+..+...... ... ..........+.
T Consensus 101 ~A~~~p~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (286)
T d1xkta_ 101 MCSQLQAQQSPAPTHNSLFLFDGSPTYVLAYTQSYRAKLTPGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLKGLEER 180 (286)
T ss_dssp HHHHHHHC------CCEEEEESCCSCC-------------CCCHHHHHHHHHHHHHHHHSCCCHHHHHHHHTTSSSHHHH
T ss_pred HHHHHHHcCCCceeEEEeecccccccccchhhhhhhhhhhhhhhhhhHHHHHHHHHhhhccccHHHHHHHHHhhhhhhHH
Confidence 999999999876 2223 33333221000 000 000011111110
Q ss_pred -----hcC-CccccCCHHHHHHHHHHHHHHHHhhccccCCCCCcccceEEEEeeCCCC---CCChhhcCcccccCCCeEE
Q psy1119 1277 -----DLM-PEDATHSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQA---LPTAEDYGLSKVCKKPVKV 1347 (1392)
Q Consensus 1277 -----~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~---~~~~~~~~W~~~~~g~v~v 1347 (1392)
... .................+++++.....|.... +.++++.++.+..+. .......+|++++.+.+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (286)
T d1xkta_ 181 VAAAVDLIIKSHQGLDRQELSFAARSFYYKLRAAEQYTPKA--KYYGNVMLLRAKTGGAYGEDLGADYNLSQVCDGKVSV 258 (286)
T ss_dssp HHHHHHHHHTTCTTSCHHHHHHHHHHHHHHHHHHTTCCCSS--CBCSCEEEEEESCC------CCSSTTGGGTBCSCEEE
T ss_pred HHHHHHHhhhcccccCHHHHHHHHHHHHHHhHHhhhhcccc--ccCcceeEEEeccCcccccChhHHHHHHHhCCCCCEE
Confidence 000 11112355666677788888888888877654 667777777776654 2345667899999999999
Q ss_pred EEEccCccccccChHHHHHHHhhhcccC
Q psy1119 1348 HFVDGNHFTVLDNIKSAQIIMHEDSTDF 1375 (1392)
Q Consensus 1348 ~~v~G~H~~ml~~~~~~~i~~~l~~~L~ 1375 (1392)
+.++|+|++|+++|+...++..|++.|+
T Consensus 259 ~~i~g~H~~~le~p~~~~va~~i~~~LA 286 (286)
T d1xkta_ 259 HVIEGDHRTLLEGSGLESIISIIHSSLA 286 (286)
T ss_dssp EEESSCTTTTTC-CHHHHHHHHHHHHCC
T ss_pred EEEcCCCccccCCccHHHHHHHHHHhcC
Confidence 9999999999999999999999998874
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.87 E-value=3.1e-21 Score=215.93 Aligned_cols=179 Identities=20% Similarity=0.210 Sum_probs=155.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
..+|++|||||++|||+++|+.|+++|++ |+++.|+. ....+...++++..|.++..+.||++|+++++++++++ +
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~~-Vvi~~~~~--~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGAS-VVVNYGSS--SKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS 80 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSC--HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEcCCC--hHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999998 56654442 23345566777888999999999999999999999998 7
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc-CCCCChhHHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR-GNAGQTNYGMANS 936 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~-G~~gq~~Yaaana 936 (1392)
++|+||++|||||.....++.+.+.++|+++++.|+.+.+++.+++.+++.+.+.+++++|.++.. |.+++..|+++|+
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~~~Y~asK~ 160 (259)
T d1ja9a_ 81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKA 160 (259)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHH
T ss_pred HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCchhHHHHHH
Confidence 799999999999999999999999999999999999999999999988777677888887776655 7899999999999
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 937 IMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
++.+|++..+.+ |..+-+|..|.+
T Consensus 161 al~~l~r~lA~e~~~~gIrvN~I~PG~i 188 (259)
T d1ja9a_ 161 AVEGFCRAFAVDCGAKGVTVNCIAPGGV 188 (259)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCB
T ss_pred HHHHHHHHHHHHHhhcCeEEeccCcCCc
Confidence 999999988876 566677777766
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=3e-21 Score=213.81 Aligned_cols=172 Identities=20% Similarity=0.165 Sum_probs=144.6
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
...+|++|||||++|||+++|+.|+++|++ |++++|+. +..++..+++. .+..+.+|++|++++++++ +
T Consensus 4 ~L~GK~~lITGas~GIG~aia~~la~~G~~-V~~~~r~~---~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~---~ 72 (244)
T d1pr9a_ 4 FLAGRRVLVTGAGKGIGRGTVQALHATGAR-VVAVSRTQ---ADLDSLVRECP----GIEPVCVDLGDWEATERAL---G 72 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHST----TCEEEECCTTCHHHHHHHH---T
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEECCH---HHHHHHHHhcC----CCeEEEEeCCCHHHHHHHH---H
Confidence 357899999999999999999999999997 88899984 22233333332 3567889999999998776 4
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhh-hC--CCCCeEEEecccccccCCCCChhHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRT-MC--PTLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~-~~--~~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
++|+||++|||||+....++.+++.++|+++++.|+.|++++.+++.+ ++ ...+.+|++||+++..+.++++.|+++
T Consensus 73 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~as 152 (244)
T d1pr9a_ 73 SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCST 152 (244)
T ss_dssp TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred HhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhh
Confidence 689999999999999999999999999999999999999999987755 33 245899999999999999999999999
Q ss_pred HHHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 935 NSIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
|+++.+|++..+.+. ..+-+|..|.+
T Consensus 153 Kaal~~lt~~lA~el~~~gIrvN~I~PG~v 182 (244)
T d1pr9a_ 153 KGALDMLTKVMALELGPHKIRVNAVNPTVV 182 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEeeCcC
Confidence 999999999998774 44555555554
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=1.7e-21 Score=221.83 Aligned_cols=178 Identities=18% Similarity=0.130 Sum_probs=149.5
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHh-----cCCceEEEEeccCCCHHHHHHH
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK-----SYDVQVLISTDDITTEAGVVNL 852 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~-----~~G~~v~~~~~Dv~~~~~v~~l 852 (1392)
...+|++|||||++|||+++|+.|+++||+ |++++|+..... ...++++ ..|.++..++||++|+++++++
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga~-Vvi~~r~~~~l~---~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~ 84 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGSN-VVIASRKLERLK---SAADELQANLPPTKQARVIPIQCNIRNEEEVNNL 84 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHH---HHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHH---HHHHHHHhhhccccCceEEEEeccCCCHHHHHHH
Confidence 468999999999999999999999999997 889999853332 2333333 3478999999999999999999
Q ss_pred HHHH-hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCCh
Q psy1119 853 LTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQT 929 (1392)
Q Consensus 853 ~~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~ 929 (1392)
++++ +++|+||++|||||+....++.+++.++|+++++.|+.|++++.+++.+.+. ..+.+|++|| ++..+.++++
T Consensus 85 ~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~ 163 (297)
T d1yxma1 85 VKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAV 163 (297)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCH
T ss_pred HHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccc
Confidence 9998 7799999999999999999999999999999999999999999998866553 3356776654 6777899999
Q ss_pred hHHHHHHHHHHHHHHHHHcCCC----eEEEEcccc
Q psy1119 930 NYGMANSIMERICEARRAEGLP----GLAVEWGAV 960 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~Glp----~~ai~~g~~ 960 (1392)
.|+++|+++.+|++..+.+..| +-+|..|.+
T Consensus 164 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i 198 (297)
T d1yxma1 164 HSGAARAGVYNLTKSLALEWACSGIRINCVAPGVI 198 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSB
T ss_pred cchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcC
Confidence 9999999999999999887544 445555544
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.86 E-value=2.5e-21 Score=214.06 Aligned_cols=171 Identities=19% Similarity=0.134 Sum_probs=143.2
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
..+|++|||||++|||+++|+.|+++|++ |++++|+. +..++..+++ ..+..+.||++|++++++++ ++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~Ga~-V~~~~r~~---~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~---~~ 71 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHASGAK-VVAVTRTN---SDLVSLAKEC----PGIEPVCVDLGDWDATEKAL---GG 71 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHHHS----TTCEEEECCTTCHHHHHHHH---TT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHHHhc----CCCeEEEEeCCCHHHHHHHH---HH
Confidence 36899999999999999999999999997 88889973 2223333332 23567889999999988765 46
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhh-C--CCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTM-C--PTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~-~--~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
+|+||++|||||+...+++.+++.++|+++++.|+.|++++.+++.+. + ...+.+|++||+++..+.++++.|+++|
T Consensus 72 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK 151 (242)
T d1cyda_ 72 IGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK 151 (242)
T ss_dssp CCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred cCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchH
Confidence 899999999999999999999999999999999999999999877543 2 2447999999999999999999999999
Q ss_pred HHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 936 SIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
+++.+|++..+.+. ..+-+|..|.+
T Consensus 152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i 180 (242)
T d1cyda_ 152 GAMTMLTKAMAMELGPHKIRVNSVNPTVV 180 (242)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred HHHHHHHHHHHHHhCccCeecccCCCCCc
Confidence 99999999998774 44556666554
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.86 E-value=1.5e-21 Score=220.25 Aligned_cols=174 Identities=18% Similarity=0.182 Sum_probs=145.9
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+|++|||||++|||+++|+.|+++||+ |++++|+. +..++.. +..|.++..+.||++++++++++++++ ++
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~-V~i~~r~~---~~l~~~~---~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 76 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAEGAK-VAVLDKSA---ERLAELE---TDHGDNVLGIVGDVRSLEDQKQAASRCVAR 76 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHH---HHHGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCH---HHHHHHH---HHcCCCeeEEecccccHHHHHHHHHHHHHH
Confidence 6899999999999999999999999996 88899983 2222222 334778999999999999999999998 77
Q ss_pred cCCccEEEECcccCCCc-----cccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-CCCCeEEEecccccccCCCCChhHH
Q psy1119 859 LGPVDGIFNLAVVLKDA-----LFENQTPEDFNASLGPKANATKYFDKYSRTMC-PTLGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~-----~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~~l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
+|+||++|||||+.... ...+.+.++|++++++|+.|++++.+++.+++ +..+.+|++||.++..+.++++.|+
T Consensus 77 ~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~~~~Y~ 156 (276)
T d1bdba_ 77 FGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYT 156 (276)
T ss_dssp HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSSCHHHH
T ss_pred hCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCCCchHH
Confidence 99999999999986543 33566677899999999999999999887665 3458999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCeE---EEEcccc
Q psy1119 933 MANSIMERICEARRAEGLPGL---AVEWGAV 960 (1392)
Q Consensus 933 aana~ld~la~~r~~~Glp~~---ai~~g~~ 960 (1392)
++|+++.+|++..+.+..|.+ +|..|.+
T Consensus 157 asKaal~~ltr~lA~ela~~IrVN~I~PG~i 187 (276)
T d1bdba_ 157 AAKHAIVGLVRELAFELAPYVRVNGVGSGGI 187 (276)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHhhcceEEcccCCCCE
Confidence 999999999999998854544 4444444
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.86 E-value=7.4e-21 Score=214.44 Aligned_cols=182 Identities=14% Similarity=0.196 Sum_probs=158.8
Q ss_pred ccCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 777 YADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 777 ~~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
.-..+|++|||||++|||+++|+.|+++|++ |++++|+. .+..+...++++..|.++.+++||++|+++++++++++
T Consensus 14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~-Vvi~~~~~--~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~ 90 (272)
T d1g0oa_ 14 ASLEGKVALVTGAGRGIGREMAMELGRRGCK-VIVNYANS--TESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA 90 (272)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSC--HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEeCCc--hHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHH
Confidence 3467999999999999999999999999998 77777763 23345566777888999999999999999999999998
Q ss_pred -hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc-CCCCChhHHHH
Q psy1119 857 -NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR-GNAGQTNYGMA 934 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~-G~~gq~~Yaaa 934 (1392)
+.+|+||++|||||.....++.+++.++|++.++.|+.|++++.+++.+++.+.+.+++++|+++.. +.++++.|+++
T Consensus 91 ~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~~~~Y~as 170 (272)
T d1g0oa_ 91 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGS 170 (272)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHH
T ss_pred HHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccchhhHHHH
Confidence 7799999999999999999999999999999999999999999999988887788899998887655 57888999999
Q ss_pred HHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 935 NSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 935 na~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
|+++++|++..+.+ |..+-+|..|.+.
T Consensus 171 Kaal~~ltk~lA~e~~~~gIrVN~I~PG~v~ 201 (272)
T d1g0oa_ 171 KGAIETFARCMAIDMADKKITVNVVAPGGIK 201 (272)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred HHHHHHHHHHHHHHhchhCeEEEEEccCCcC
Confidence 99999999988876 5556666666653
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.85 E-value=8.3e-21 Score=212.48 Aligned_cols=175 Identities=19% Similarity=0.170 Sum_probs=147.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHH---hCCceEEEecCCCcccHHHHHHHHHHh--cCCceEEEEeccCCCHHHHHHHHH
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVL---RGARKLVLTSRSGVKNGYQALRIKIWK--SYDVQVLISTDDITTEAGVVNLLT 854 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~---~GAr~lvl~sRs~~~~~~~~~~~~~l~--~~G~~v~~~~~Dv~~~~~v~~l~~ 854 (1392)
.+|++|||||++|||+++|+.|++ +|++ |++++|+... .++..++++ ..+.++..++||++++++++++++
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~-Vv~~~r~~~~---l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~ 80 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSV-MLVSARSESM---LRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLS 80 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCE-EEEEESCHHH---HHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCCE-EEEEECCHHH---HHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHH
Confidence 579999999999999999999997 6886 8899998533 334444443 357799999999999999999999
Q ss_pred HHhh-----cCCccEEEECcccCC---CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCC----CeEEEecccccc
Q psy1119 855 EANK-----LGPVDGIFNLAVVLK---DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTL----GQFVVFSSVSCG 922 (1392)
Q Consensus 855 ~~~~-----~g~I~gvi~~Agv~~---d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l----~~fV~~SS~s~~ 922 (1392)
.+.+ ++.++.+|||||+.. .+.+.+++.++|+++++.|+.|++++.+++.+++.+. +.+|++||+++.
T Consensus 81 ~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~ 160 (259)
T d1oaaa_ 81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL 160 (259)
T ss_dssp HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred HHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc
Confidence 8743 468999999999864 4568999999999999999999999999988777543 589999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHcCCCeEEEEccc
Q psy1119 923 RGNAGQTNYGMANSIMERICEARRAEGLPGLAVEWGA 959 (1392)
Q Consensus 923 ~G~~gq~~Yaaana~ld~la~~r~~~Glp~~ai~~g~ 959 (1392)
.+.++++.|+++|+++++|++..+.+ .+.+.+|.-.
T Consensus 161 ~~~~~~~~Y~asKaal~~lt~~la~e-~~gIrVn~v~ 196 (259)
T d1oaaa_ 161 QPYKGWGLYCAGKAARDMLYQVLAAE-EPSVRVLSYA 196 (259)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHH-CTTEEEEEEE
T ss_pred CCCccchHHHHHHHHHHHHHHHHHhC-CCCCEEEEEE
Confidence 99999999999999999999999988 3444444333
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.85 E-value=7.1e-21 Score=212.72 Aligned_cols=178 Identities=15% Similarity=0.146 Sum_probs=148.9
Q ss_pred CCCCeEEEEcCcc--hHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 779 DSNKSYIICGGLG--GFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 779 ~~~~~ylItGG~g--GiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
.++|++|||||+| |||+++|+.|+++||+ |++..|+....... ++....+..+..++||++|+++++++++.+
T Consensus 6 L~gK~alITGas~~~GIG~aiA~~la~~Ga~-V~i~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (256)
T d1ulua_ 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAE-VALSYQAERLRPEA----EKLAEALGGALLFRADVTQDEELDALFAGV 80 (256)
T ss_dssp CTTCEEEEESCCCSSSHHHHHHHHHHHTTCE-EEEEESSGGGHHHH----HHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCE-EEEEeCcHHHHHHH----HHhhhccCcccccccccCCHHHHHHHHHHH
Confidence 4789999999887 9999999999999997 88888874322222 222333446678999999999999999998
Q ss_pred -hhcCCccEEEECcccCC----CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhH
Q psy1119 857 -NKLGPVDGIFNLAVVLK----DALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~----d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
+++|+||++|||||+.. ...+.+.+.++|+.+++.|+.+++++.+++.+++.+.+.+|++||+++..+.++++.|
T Consensus 81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~~Y 160 (256)
T d1ulua_ 81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVM 160 (256)
T ss_dssp HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHH
T ss_pred HHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCchHH
Confidence 77999999999999754 3457889999999999999999999999887776667999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 932 GMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 932 aaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+++|+++.+|++..+.+ |..+-+|..|.+.
T Consensus 161 ~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~ 194 (256)
T d1ulua_ 161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVR 194 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-
T ss_pred HHHHHHHHHHHHHHHHHhcccCCEEeeeccceee
Confidence 99999999999998877 4555666666553
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=7.9e-21 Score=211.80 Aligned_cols=169 Identities=17% Similarity=0.151 Sum_probs=141.5
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHH-
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS--YDVQVLISTDDITTEAGVVNLLTEA- 856 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~--~G~~v~~~~~Dv~~~~~v~~l~~~~- 856 (1392)
.+|++|||||++|||+++|+.|+++|++ |++++|+..+ .++..+++.. .+.++.+++||++++++++++++.+
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~-V~i~~r~~~~---~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAK-VALVDWNLEA---GVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVV 77 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHH---HHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHH---HHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 4799999999999999999999999997 9999998432 3334444543 3678999999999999999999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC-----CCeEEEecccccccCCCCChhH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT-----LGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~-----l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
+++|+||++|||||+... ++|+++++.|+.+++++.+++.+++.+ .+.||++||+++..|.++++.|
T Consensus 78 ~~~G~iDilVnnAg~~~~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y 149 (254)
T d2gdza1 78 DHFGRLDILVNNAGVNNE--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVY 149 (254)
T ss_dssp HHHSCCCEEEECCCCCCS--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHH
T ss_pred HHcCCcCeeccccccccc--------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccch
Confidence 779999999999998643 468999999999999999888665532 3679999999999999999999
Q ss_pred HHHHHHHHHHHHH--HHH----cCCCeEEEEcccc
Q psy1119 932 GMANSIMERICEA--RRA----EGLPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~--r~~----~Glp~~ai~~g~~ 960 (1392)
+++|+++.+|++. ++. .|..+.+|..|.+
T Consensus 150 ~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i 184 (254)
T d2gdza1 150 CASKHGIVGFTRSAALAANLMNSGVRLNAICPGFV 184 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCB
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCC
Confidence 9999999999985 333 3556667777766
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.85 E-value=2.6e-21 Score=205.55 Aligned_cols=175 Identities=13% Similarity=0.164 Sum_probs=136.4
Q ss_pred CCCHhhHhhhhHHHHHHHHHHHHhcCCCCC--CEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHCCCC
Q psy1119 537 QWTLEDAATVPCVYATAVYAMFICGQMQKG--ESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTPEKREFIRKTFPFI 613 (1392)
Q Consensus 537 ~ls~e~AA~lp~~~~TA~~aL~~~a~l~~G--etVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ek~~~l~~~~p~l 613 (1392)
++|+.+.| +++++.|||++|...+++++| |+||||||+|+||++++|+||..||+ |++++++++++..+.+. +
T Consensus 1 ~~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~---~ 76 (187)
T d1vj1a2 1 HLSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSE---L 76 (187)
T ss_dssp CGGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHH---S
T ss_pred CccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhc---c
Confidence 46777765 778999999999999999988 99999999999999999999999996 55677788888877763 7
Q ss_pred CcCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCc-----cc----cccccC
Q psy1119 614 KEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNN-----ML----GMEVFM 684 (1392)
Q Consensus 614 ~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~-----~l----~~~~~~ 684 (1392)
++++++|++++++.+.+++.++ +|+|+|||+++++.++.+++|++++||++.+|........ .. ......
T Consensus 77 gad~vi~~~~~~~~~~~~~~~~-~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~ 155 (187)
T d1vj1a2 77 GFDAAVNYKTGNVAEQLREACP-GGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKE 155 (187)
T ss_dssp CCSEEEETTSSCHHHHHHHHCT-TCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHH
T ss_pred cceEEeeccchhHHHHHHHHhc-cCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHh
Confidence 8999999999999999999986 7999999999999999999999999999999964321110 00 112345
Q ss_pred CCcEEEEEechhhhhhCHHHHHHHHHHHHHHHHcCC
Q psy1119 685 RETSFHGVMLDNFFFAEQEWKMSLQKALQKAIDAGA 720 (1392)
Q Consensus 685 k~~s~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 720 (1392)
|++++.|+.+..+... ..+..+.+.+++++|+
T Consensus 156 k~i~~~g~~~~~~~~~----~~e~~~~l~~~i~~Gk 187 (187)
T d1vj1a2 156 RNITRERFTVLNYKDK----FEPGILQLSQWFKEGK 187 (187)
T ss_dssp TTCEEEECCGGGCGGG----HHHHHHHHHHHHHHTS
T ss_pred cceEEEEeEecchHHH----HHHHHHHHHHHHHCcC
Confidence 8899998765544322 2345556667777764
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.84 E-value=8.9e-21 Score=211.11 Aligned_cols=171 Identities=19% Similarity=0.157 Sum_probs=142.0
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCC-CHHHHHHHHHHH-
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDIT-TEAGVVNLLTEA- 856 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~-~~~~v~~l~~~~- 856 (1392)
.++|++|||||++|||+++|+.|+++|++ +++++|+..+.....+ +. ....+.++.++.||++ +.++++++++.+
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~G~~-vii~~r~~~~~~~~~~-~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 79 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKRNLK-NFVILDRVENPTALAE-LK-AINPKVNITFHTYDVTVPVAESKKLLKKIF 79 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCS-EEEEEESSCCHHHHHH-HH-HHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEECCcccHHHHHH-HH-hhCCCCCEEEEEeecCCCHHHHHHHHHHHH
Confidence 36899999999999999999999999998 6666666543322221 21 2345678999999998 678899999998
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-----CCCeEEEecccccccCCCCChhH
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-----TLGQFVVFSSVSCGRGNAGQTNY 931 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-----~l~~fV~~SS~s~~~G~~gq~~Y 931 (1392)
+++|+||++|||||.. +.++|++++++|+.|++++.+++.+.+. ..+.+|++||.++..|.++++.|
T Consensus 80 ~~~g~iDilvnnAG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y 151 (254)
T d1sbya1 80 DQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVY 151 (254)
T ss_dssp HHHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHH
T ss_pred HHcCCCCEEEeCCCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHH
Confidence 6799999999999964 5678999999999999999998876553 24789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 932 GMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 932 aaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++|+++.+|++..+.+ |..+.+|..|.+
T Consensus 152 ~asKaal~~~t~~la~el~~~gIrVn~I~PG~v 184 (254)
T d1sbya1 152 SASKAAVVSFTNSLAKLAPITGVTAYSINPGIT 184 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSE
T ss_pred HHHHHHHHHHHHHHHhhccccCeEEEEEEeCCC
Confidence 99999999999988876 566677777765
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.84 E-value=7e-21 Score=199.43 Aligned_cols=152 Identities=23% Similarity=0.279 Sum_probs=130.3
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcC
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEE 616 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~ 616 (1392)
+|+|+||.++++++|||+++ +.+++++||+|||+| +|+||++++|+|+.+|+ +|++++.+++|++++++ +|++
T Consensus 1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~G-aG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~----lGa~ 74 (174)
T d1jqba2 1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIG-IGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF----YGAT 74 (174)
T ss_dssp SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEEC-CSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH----HTCS
T ss_pred CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEc-CCcchhhhhhhhhcccccccccccchhhhHHHHHh----hCcc
Confidence 58999999999999999997 678999999999995 59999999999999998 68999999999999986 6899
Q ss_pred ceeeCCCccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccc---cccccCCCcEEEEE
Q psy1119 617 NIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNML---GMEVFMRETSFHGV 692 (1392)
Q Consensus 617 ~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l---~~~~~~k~~s~~g~ 692 (1392)
+++|+++.++.+.+++.|+|+|+|+|||+++. +.+++++++++++|+++.+|.........+ .+..+.+++++.+.
T Consensus 75 ~~i~~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~ 154 (174)
T d1jqba2 75 DILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGG 154 (174)
T ss_dssp EEECGGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEB
T ss_pred ccccccchhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEe
Confidence 99999999999999999999999999999975 578999999999999999997543322222 22334567888886
Q ss_pred ech
Q psy1119 693 MLD 695 (1392)
Q Consensus 693 ~~~ 695 (1392)
...
T Consensus 155 ~~~ 157 (174)
T d1jqba2 155 LCP 157 (174)
T ss_dssp CCC
T ss_pred cCC
Confidence 543
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.84 E-value=3.4e-21 Score=214.50 Aligned_cols=169 Identities=12% Similarity=0.038 Sum_probs=144.9
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hhcCC
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NKLGP 861 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~~g~ 861 (1392)
|+|||||++|||+++|+.|+++|++ |++++|+....++.+... .. ..+||+++.++++++++++ +++|+
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~-V~i~~r~~~~~~~~~~~~---~~------~~~~dv~~~~~~~~~~~~~~~~~G~ 71 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHT-VACHDESFKQKDELEAFA---ET------YPQLKPMSEQEPAELIEAVTSAYGQ 71 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCE-EEECCGGGGSHHHHHHHH---HH------CTTSEECCCCSHHHHHHHHHHHHSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHhhh---Cc------EEEeccCCHHHHHHHHHHHHHHcCC
Confidence 7999999999999999999999996 889999864433322211 11 2468999999999999998 78999
Q ss_pred ccEEEECcccCC-CccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 862 VDGIFNLAVVLK-DALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 862 I~gvi~~Agv~~-d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
||++|||||+.. .+++.+++.++|+++++.|+.|++++.+++.+++. ..+.||++||+++..+.++++.|+++|+++
T Consensus 72 iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal 151 (252)
T d1zmta1 72 VDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGA 151 (252)
T ss_dssp CCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHH
T ss_pred CCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccH
Confidence 999999999864 57899999999999999999999999998876653 458999999999999999999999999999
Q ss_pred HHHHHHHHHc----CCCeEEEEccccC
Q psy1119 939 ERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 939 d~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
.+|++..+.+ |..+-+|..|.+.
T Consensus 152 ~~lt~~lA~ela~~gIrVN~I~PG~i~ 178 (252)
T d1zmta1 152 CTLANALSKELGEYNIPVFAIGPNYLH 178 (252)
T ss_dssp HHHHHHHHHHHGGGTCCEEEEEESSBC
T ss_pred HHHHHHHHHHhcccCcEEEEEecCCCc
Confidence 9999998766 6777888888764
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=4.1e-21 Score=216.99 Aligned_cols=176 Identities=16% Similarity=0.091 Sum_probs=150.6
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHh-CCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLR-GARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~-GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+++|||||++|||+++|+.|+++ |++ |++++|+.. ..++..+++++.|.++.++.||++|.++++++++++ ++
T Consensus 3 ~rVAlVTGas~GIG~a~A~~la~~~g~~-Vi~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~ 78 (275)
T d1wmaa1 3 IHVALVTGGNKGIGLAIVRDLCRLFSGD-VVLTARDVT---RGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE 78 (275)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSE-EEEEESSHH---HHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CeEEEECCCCCHHHHHHHHHHHHhCCCE-EEEEECCHH---HHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHh
Confidence 357899999999999999999997 665 999999853 344556677788889999999999999999999998 67
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC------------
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA------------ 926 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~------------ 926 (1392)
+|+||++|||||+.....+.+.+.++|+.++++|+.|++++.+++.+++++.+.+|++||+++..+.+
T Consensus 79 ~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~ 158 (275)
T d1wmaa1 79 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRS 158 (275)
T ss_dssp HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred cCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcc
Confidence 99999999999999999999999999999999999999999999988877779999999988765432
Q ss_pred -----------------------------CChhHHHHHHHHHHHHHHHHHc--------CCCeEEEEcccc
Q psy1119 927 -----------------------------GQTNYGMANSIMERICEARRAE--------GLPGLAVEWGAV 960 (1392)
Q Consensus 927 -----------------------------gq~~Yaaana~ld~la~~r~~~--------Glp~~ai~~g~~ 960 (1392)
+.+.|+++|+++..|++..+.+ |..+.+|..|.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v 229 (275)
T d1wmaa1 159 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWV 229 (275)
T ss_dssp SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSB
T ss_pred cccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccc
Confidence 3457999999999998765433 566677777765
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=3.1e-20 Score=208.88 Aligned_cols=179 Identities=16% Similarity=0.115 Sum_probs=155.2
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHH-HhcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKI-WKSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~-l~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
+..+|++|||||++|||+++|+.|+++|++ |++++|+..+. ++..++ ....+..+..+.+|+++.+.+..+++.+
T Consensus 11 ~L~GK~alITGassGIG~aiA~~la~~G~~-Vil~~r~~~~l---~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 86 (269)
T d1xu9a_ 11 MLQGKKVIVTGASKGIGREMAYHLAKMGAH-VVVTARSKETL---QKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQA 86 (269)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESCHHHH---HHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHH---HHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHH
Confidence 468999999999999999999999999996 99999985332 222233 3456888999999999999999999998
Q ss_pred -hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-CCCeEEEecccccccCCCCChhHHHH
Q psy1119 857 -NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-TLGQFVVFSSVSCGRGNAGQTNYGMA 934 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-~l~~fV~~SS~s~~~G~~gq~~Yaaa 934 (1392)
..+|.+|.++||||......+.+.+.++|++++++|+.|++++.+++.+++. ..+.+|++||+++..|.++++.|+++
T Consensus 87 ~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~~~Y~as 166 (269)
T d1xu9a_ 87 GKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSAS 166 (269)
T ss_dssp HHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred HHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCchHHHHH
Confidence 6789999999999999999999999999999999999999999998876653 45899999999999999999999999
Q ss_pred HHHHHHHHHHHHHc----C--CCeEEEEcccc
Q psy1119 935 NSIMERICEARRAE----G--LPGLAVEWGAV 960 (1392)
Q Consensus 935 na~ld~la~~r~~~----G--lp~~ai~~g~~ 960 (1392)
|+++++|++..+.+ | ..+.+|..|.+
T Consensus 167 Kaal~~~~~~La~El~~~~~~I~V~~v~PG~v 198 (269)
T d1xu9a_ 167 KFALDGFFSSIRKEYSVSRVNVSITLCVLGLI 198 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCEEEEEEECCB
T ss_pred HHHHHHHHHHHHHHhhhcCCCEEEEEEecCcC
Confidence 99999999999876 3 33456666665
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=3.9e-21 Score=201.18 Aligned_cols=166 Identities=14% Similarity=0.181 Sum_probs=133.0
Q ss_pred CCHhhHhhhhHHHHHHHHHHH---HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCC
Q psy1119 538 WTLEDAATVPCVYATAVYAMF---ICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIK 614 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~---~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~ 614 (1392)
+|+.+||++|+++.|||++++ ..+...++++||||||+||||+++||+||.+||+|++|+++++|++++++ ++
T Consensus 1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~----lG 76 (177)
T d1o89a2 1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS----LG 76 (177)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH----HT
T ss_pred CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHh----hc
Confidence 589999999999999997754 44555567799999999999999999999999999999999999999987 78
Q ss_pred cCceeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEec
Q psy1119 615 EENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVML 694 (1392)
Q Consensus 615 ~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~ 694 (1392)
+++++|+++.++.+. ......|.|+|+++++.+..++++++++||++.+|..+........+.++.|++++.|++.
T Consensus 77 ad~vi~~~~~~~~~~----l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~~~ 152 (177)
T d1o89a2 77 ASRVLPRDEFAESRP----LEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDS 152 (177)
T ss_dssp EEEEEEGGGSSSCCS----SCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEECCS
T ss_pred cccccccccHHHHHH----HHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEEEec
Confidence 999999987765432 2334679999999999999999999999999999977554443334466789999999864
Q ss_pred hhhhhhCHHHHHHHHHHHHH
Q psy1119 695 DNFFFAEQEWKMSLQKALQK 714 (1392)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~ 714 (1392)
.. ..++...+.++.+.+
T Consensus 153 ~~---~~~~~~~~~~~~L~~ 169 (177)
T d1o89a2 153 VM---TPPERRAQAWQRLVA 169 (177)
T ss_dssp SS---CCHHHHHHHHHHHHH
T ss_pred cc---CCHHHHHHHHHHHHH
Confidence 32 234444444444433
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.83 E-value=6e-21 Score=189.52 Aligned_cols=126 Identities=16% Similarity=0.164 Sum_probs=111.8
Q ss_pred eeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
....+|.+ +++.+.+.|. |+++||+|||+|+|||++|++.+.|.++.. ...|.++|+|++|+|
T Consensus 5 ~~~~~G~~--l~~~e~~~p~--------p~~~eVlVkv~a~gin~~D~~~~~G~~~~~------~~~P~v~G~E~~G~V- 67 (131)
T d1iz0a1 5 VLKRLGGP--LELVDLPEPE--------AEEGEVVLRVEAVGLNFADHLMRLGAYLTR------LHPPFIPGMEVVGVV- 67 (131)
T ss_dssp EECSTTSC--EEEEECCCCC--------CCTTEEEEEEEEEEECHHHHHHHHTCSSSC------CCSSBCCCCEEEEEE-
T ss_pred EEccCCCC--CEEEEccCCC--------CCCCEEEEEEEEEecccccccccccccccc------ccceeEeeeeeEEee-
Confidence 44556653 8899999886 799999999999999999999999987543 124789999999998
Q ss_pred eCCCeEEEeecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEE
Q psy1119 506 DSGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILI 571 (1392)
Q Consensus 506 ~vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI 571 (1392)
+||+|+++..+|+|+||+.++++.++++|+++|+++||++++++.|||++|.+++ +.|++||+
T Consensus 68 -vGd~V~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~ 130 (131)
T d1iz0a1 68 -EGRRYAALVPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG--HTGKVVVR 130 (131)
T ss_dssp -TTEEEEEECSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT--CCBEEEEE
T ss_pred -ccceEEEEeccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc--cCCCEEEE
Confidence 5999999999999999999999999999999999999999999999999998776 45999987
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.82 E-value=3.9e-20 Score=193.32 Aligned_cols=152 Identities=19% Similarity=0.295 Sum_probs=132.7
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcC
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEE 616 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~ 616 (1392)
+|+.|||+++|++.|||+++ .++++++||+|+|+|++|++|++++|++++.|+ +|+++..+++|++++++ +|++
T Consensus 1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~----~Ga~ 75 (170)
T d1jvba2 1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----AGAD 75 (170)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----HTCS
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH----cCCc
Confidence 58899999999999999998 668999999999999899999999999999996 88899999999999987 6889
Q ss_pred ceeeCCCccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEech
Q psy1119 617 NIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLD 695 (1392)
Q Consensus 617 ~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~ 695 (1392)
+++|+++.++.+.+++.|.++++|+|+|+.++ +.++.++++++++|+++.+|..... .......++.|++++.|+...
T Consensus 76 ~~i~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~k~i~i~Gs~~~ 154 (170)
T d1jvba2 76 YVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGAD-LHYHAPLITLSEIQFVGSLVG 154 (170)
T ss_dssp EEEETTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCC-CCCCHHHHHHHTCEEEECCSC
T ss_pred eeeccCCcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCc-cccCHHHHHhCCcEEEEEecC
Confidence 99999999999999999999999999999986 5689999999999999999965322 222233566789999997653
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.82 E-value=1.5e-19 Score=198.78 Aligned_cols=163 Identities=18% Similarity=0.153 Sum_probs=136.1
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
++|++|||||++|||+++|+.|+++||+ |++++|+. +.+++.+.+ ++.||+++. ++.++ +++
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~-V~~~~r~~----------~~l~~~~~~--~~~~Dv~~~--~~~~~---~~~ 64 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAE-VTICARNE----------ELLKRSGHR--YVVCDLRKD--LDLLF---EKV 64 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCH----------HHHHHTCSE--EEECCTTTC--HHHHH---HHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCH----------HHHHhcCCc--EEEcchHHH--HHHHH---HHh
Confidence 5899999999999999999999999997 88899972 122334544 467999864 33222 578
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
|+||++|||||+....++.+++.++|+++++.|+.+++++.+++.+.+. ..+.+|++||+++..+.++...|+++|++
T Consensus 65 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaa 144 (234)
T d1o5ia_ 65 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMA 144 (234)
T ss_dssp CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHH
Confidence 9999999999999999999999999999999999999999998866553 45799999999999999999999999999
Q ss_pred HHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 938 MERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 938 ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
+.+|++..+.+. ..+-+|..|.+
T Consensus 145 l~~ltk~lA~ela~~gIrVN~I~PG~v 171 (234)
T d1o5ia_ 145 LTGFLKTLSFEVAPYGITVNCVAPGWT 171 (234)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHhcccCeEEeecccCcc
Confidence 999999988774 44455555554
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.81 E-value=6.3e-20 Score=203.88 Aligned_cols=174 Identities=16% Similarity=0.149 Sum_probs=144.3
Q ss_pred CeEEEEcCcchHHHHHHHHHH---HhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH--
Q psy1119 782 KSYIICGGLGGFGLELADWLV---LRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-- 856 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La---~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-- 856 (1392)
||+|||||++|||+++|+.|+ ++|++ |++++|+....+..+ ++...+.++.++.||++|+++++++++.+
T Consensus 3 KtilITGas~GIG~a~a~~l~~~a~~g~~-V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~ 77 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLNLPQPPQH-LFTTCRNREQAKELE----DLAKNHSNIHILEIDLRNFDAYDKLVADIEG 77 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSE-EEEEESCTTSCHHHH----HHHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHHhCCCE-EEEEECCHHHHHHHH----HHHhcCCcEEEEEEEeccHHHHHHHHhhhHH
Confidence 789999999999999999997 46886 888999976554332 23334668999999999999999999986
Q ss_pred -hhcCCccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-------------CCCeEEEeccccc
Q psy1119 857 -NKLGPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-------------TLGQFVVFSSVSC 921 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-------------~l~~fV~~SS~s~ 921 (1392)
.++++||++|||||+... ..+.+++.++|++++++|+.|++++.+++.+++. ..+.+|++||+++
T Consensus 78 ~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g 157 (248)
T d1snya_ 78 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG 157 (248)
T ss_dssp HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred HhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccc
Confidence 357999999999998654 5789999999999999999999999998866542 2478999999988
Q ss_pred ccC---CCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 922 GRG---NAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 922 ~~G---~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
.++ .++...|+++|+++.+|++..+.+ |..+.+|..|.+
T Consensus 158 ~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v 203 (248)
T d1snya_ 158 SIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWV 203 (248)
T ss_dssp CSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSB
T ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcc
Confidence 754 567889999999999999987755 666777777765
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=99.81 E-value=1.1e-19 Score=190.38 Aligned_cols=171 Identities=19% Similarity=0.241 Sum_probs=138.4
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEE-EEEecChhhHHHHHHHCCCCCcC
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEI-FTTVGTPEKREFIRKTFPFIKEE 616 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V-~~tv~s~ek~~~l~~~~p~l~~~ 616 (1392)
++++.||+++|++.|||+++.+.+++++|++|+|+|+ |++|++++|+|+++|+++ +++..+++|++++++ +|++
T Consensus 1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~----~Ga~ 75 (174)
T d1f8fa2 1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ----LGAT 75 (174)
T ss_dssp SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH----HTCS
T ss_pred CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHH----cCCe
Confidence 3678899999999999999999999999999999965 999999999999999965 566778889999887 6889
Q ss_pred ceeeCCCccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCcccc-ccccCCCcEEEEEec
Q psy1119 617 NIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLG-MEVFMRETSFHGVML 694 (1392)
Q Consensus 617 ~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~-~~~~~k~~s~~g~~~ 694 (1392)
+++|+++.++.+++++.|+| |+|+||||++. +.++.++++++++|+++.+|.........++ ..++.+++++.|+..
T Consensus 76 ~~i~~~~~~~~~~i~~~t~g-g~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~ 154 (174)
T d1f8fa2 76 HVINSKTQDPVAAIKEITDG-GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVE 154 (174)
T ss_dssp EEEETTTSCHHHHHHHHTTS-CEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSG
T ss_pred EEEeCCCcCHHHHHHHHcCC-CCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEe
Confidence 99999999999999999987 99999999975 5789999999999999999965333222233 356789999999865
Q ss_pred hhhhhhCHHHHHHHHHHHHHHHHcCC
Q psy1119 695 DNFFFAEQEWKMSLQKALQKAIDAGA 720 (1392)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~l~~g~ 720 (1392)
... .+ ++....+.+++++|+
T Consensus 155 g~~---~~---~~~~~~~~~l~~~Gk 174 (174)
T d1f8fa2 155 GSG---SP---KKFIPELVRLYQQGK 174 (174)
T ss_dssp GGS---CH---HHHHHHHHHHHHTTS
T ss_pred cCC---Ch---HHHHHHHHHHHHcCC
Confidence 432 11 122344556666664
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=99.81 E-value=1.2e-19 Score=191.90 Aligned_cols=153 Identities=24% Similarity=0.376 Sum_probs=129.8
Q ss_pred CHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCc
Q psy1119 539 TLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEEN 617 (1392)
Q Consensus 539 s~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~ 617 (1392)
+++.+|+++|+++|||+++.+.+++++||+|||+|+ |+||++++|+|+++|| +|+++..+++|++++++ +|+++
T Consensus 2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~ 76 (182)
T d1vj0a2 2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGADL 76 (182)
T ss_dssp CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTCSE
T ss_pred cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECC-Cccchhheeccccccccccccccccccccccccc----ccceE
Confidence 457789999999999999998899999999999965 9999999999999999 79999999999999987 78999
Q ss_pred eeeCCCccHH---HHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCcccc--ccccCCCcEEEE
Q psy1119 618 IGNSRDTSFE---QLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLG--MEVFMRETSFHG 691 (1392)
Q Consensus 618 i~~s~~~~~~---~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~--~~~~~k~~s~~g 691 (1392)
++|+++.++. +.+++.++++|+|+|||+++. ..++.++++++++|+++.+|........... ..++.|+++++|
T Consensus 77 vi~~~~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G 156 (182)
T d1vj0a2 77 TLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKG 156 (182)
T ss_dssp EEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEE
T ss_pred EEeccccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEE
Confidence 9999988754 457888999999999999986 5689999999999999999965333222222 235679999999
Q ss_pred Eechh
Q psy1119 692 VMLDN 696 (1392)
Q Consensus 692 ~~~~~ 696 (1392)
+....
T Consensus 157 ~~~~~ 161 (182)
T d1vj0a2 157 IWVSD 161 (182)
T ss_dssp CCCCC
T ss_pred EEeCC
Confidence 86543
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.81 E-value=1.3e-19 Score=188.52 Aligned_cols=150 Identities=16% Similarity=0.224 Sum_probs=128.0
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCc
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEEN 617 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~ 617 (1392)
+||++||+++|+++|||+++. ++++++||+|+|+|+ |++|++++|+|+.+|++|++++.+++|++++++ +|+++
T Consensus 1 v~f~~aA~l~ca~~Ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~----~Ga~~ 74 (166)
T d1llua2 1 VEFAEIAPILCAGVTVYKGLK-QTNARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARK----LGASL 74 (166)
T ss_dssp SCHHHHGGGGTHHHHHHHHHH-HHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCSE
T ss_pred CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhc----cCccc
Confidence 589999999999999999985 589999999999865 999999999999999999999999999999987 78999
Q ss_pred eeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEech
Q psy1119 618 IGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLD 695 (1392)
Q Consensus 618 i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~ 695 (1392)
++|+++.++.+.+++.+.| +.++|+++.+++.++.++++++++|+++.+|..... .....+.++.|++++.|+...
T Consensus 75 ~i~~~~~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~k~~~i~Gs~~~ 150 (166)
T d1llua2 75 TVNARQEDPVEAIQRDIGG-AHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGD-FPTPIFDVVLKGLHIAGSIVG 150 (166)
T ss_dssp EEETTTSCHHHHHHHHHSS-EEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSE-EEEEHHHHHHTTCEEEECCSC
T ss_pred cccccchhHHHHHHHhhcC-CcccccccccchHHHHHHHHhcCCcEEEEEEecCCC-ccCCHHHHHhCCcEEEEEeec
Confidence 9999999999999887764 556666677788899999999999999999965332 222224566799999997554
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.81 E-value=1.3e-19 Score=188.82 Aligned_cols=168 Identities=17% Similarity=0.252 Sum_probs=138.0
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCc
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEEN 617 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~ 617 (1392)
+|+|+||++||+++|||+++. .+++++|++|||+| +|++|++++|+|++.|++|++++.+++|++++++ +|+++
T Consensus 1 ls~eeAA~l~~~~~Ta~~al~-~~~~~~g~~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~----~Ga~~ 74 (168)
T d1rjwa2 1 LSFEEAAPIFCAGVTTYKALK-VTGAKPGEWVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----LGADL 74 (168)
T ss_dssp SCHHHHGGGGTHHHHHHHHHH-HHTCCTTCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCSE
T ss_pred CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEee-cccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh----cCcce
Confidence 689999999999999999985 67899999999995 5999999999999999999999999999999987 78999
Q ss_pred eeeCCCccHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEechhh
Q psy1119 618 IGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLDNF 697 (1392)
Q Consensus 618 i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~~~ 697 (1392)
++++++.++.+.+++.|++ +.|+|+++.+++.+..++++++++|+++.+|...... ......++.+++++.|+....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~-~~~~~~~~~~~~~i~gs~~~~- 151 (168)
T d1rjwa2 75 VVNPLKEDAAKFMKEKVGG-VHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEM-PIPIFDTVLNGIKIIGSIVGT- 151 (168)
T ss_dssp EECTTTSCHHHHHHHHHSS-EEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEE-EEEHHHHHHTTCEEEECCSCC-
T ss_pred ecccccchhhhhcccccCC-CceEEeecCCHHHHHHHHHHhccCCceEecccccCCC-CCCHHHHHHCCcEEEEEeeCC-
Confidence 9999999999999999975 4566677777788999999999999999998653322 222235567899999875432
Q ss_pred hhhCHHHHHHHHHHHHHHHHcCCCC
Q psy1119 698 FFAEQEWKMSLQKALQKAIDAGAVQ 722 (1392)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~l~~g~l~ 722 (1392)
.+ ..+.+.+++++|++|
T Consensus 152 ----~~----~~~~~l~l~~~Gkik 168 (168)
T d1rjwa2 152 ----RK----DLQEALQFAAEGKVK 168 (168)
T ss_dssp ----HH----HHHHHHHHHHTTSCC
T ss_pred ----HH----HHHHHHHHHHhCCCC
Confidence 11 123445677777765
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.81 E-value=1.6e-20 Score=194.63 Aligned_cols=141 Identities=15% Similarity=0.206 Sum_probs=118.1
Q ss_pred HHHHHHH---HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCc
Q psy1119 548 CVYATAV---YAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDT 624 (1392)
Q Consensus 548 ~~~~TA~---~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~ 624 (1392)
+++.||| ++|.+.+..++|++||||||+||||++++|+||++||+|++|+++++|.+++++ +++++++++++
T Consensus 3 ~aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~----lGad~vi~~~~- 77 (167)
T d1tt7a2 3 TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ----LGASEVISRED- 77 (167)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH----HTCSEEEEHHH-
T ss_pred ChHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh----hcccceEeccc-
Confidence 4556666 566677778889999999999999999999999999999999999999999987 68999988643
Q ss_pred cHHHHHHHHcCCCcceEEEecCchhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEec
Q psy1119 625 SFEQLVMKRTKGRGVDLVLNSLAEEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVML 694 (1392)
Q Consensus 625 ~~~~~i~~~T~g~GvDvVlds~~~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~ 694 (1392)
+....+..+.++|+|+|||+++++.+..+++||+++||++.+|.............++.|+++++|+..
T Consensus 78 -~~~~~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~ 146 (167)
T d1tt7a2 78 -VYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDS 146 (167)
T ss_dssp -HCSSCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCS
T ss_pred -hhchhhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEec
Confidence 333445567788999999999999999999999999999999987654444444567789999999864
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.78 E-value=7.6e-19 Score=184.47 Aligned_cols=171 Identities=15% Similarity=0.147 Sum_probs=129.0
Q ss_pred CHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCc
Q psy1119 539 TLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEEN 617 (1392)
Q Consensus 539 s~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~ 617 (1392)
++|+||.++|++.|||+++.+++++++||+|||+|+ ||+|++++|+|+++|+ +|+++.++++|++++++ +|+++
T Consensus 2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~----lGa~~ 76 (176)
T d2fzwa2 2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE----FGATE 76 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----HTCSE
T ss_pred CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHH----hCCcE
Confidence 589999999999999999988999999999999966 8999999999999997 57788888899999887 78999
Q ss_pred eeeCCC-ccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEccccccc-CccccccccCCCcEEEEEec
Q psy1119 618 IGNSRD-TSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLAN-NNMLGMEVFMRETSFHGVML 694 (1392)
Q Consensus 618 i~~s~~-~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~-~~~l~~~~~~k~~s~~g~~~ 694 (1392)
++|+++ .+....+.+.+.++|+|+|||+++. ..++.++.+++++|+++.++...... ........+.++.++.|+.+
T Consensus 77 ~i~~~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~ 156 (176)
T d2fzwa2 77 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAF 156 (176)
T ss_dssp EECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSG
T ss_pred EEeCCchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEee
Confidence 998864 3344455555566799999999986 45678889999998888775443222 22223334567889999865
Q ss_pred hhhhhhCHHHHHHHHHHHHHHHHcCC
Q psy1119 695 DNFFFAEQEWKMSLQKALQKAIDAGA 720 (1392)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~l~~g~ 720 (1392)
.+.. + .++ ...+.+++++|+
T Consensus 157 G~~~---~--~~d-~~~li~l~~~GK 176 (176)
T d2fzwa2 157 GGWK---S--VES-VPKLVSEYMSKK 176 (176)
T ss_dssp GGCC---H--HHH-HHHHHHHHHTTS
T ss_pred eCCc---H--HHH-HHHHHHHHHcCC
Confidence 5421 1 122 233446666664
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=99.78 E-value=7.7e-19 Score=183.52 Aligned_cols=151 Identities=21% Similarity=0.259 Sum_probs=123.5
Q ss_pred CHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCc
Q psy1119 539 TLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEEN 617 (1392)
Q Consensus 539 s~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~ 617 (1392)
++|+||.++|++.|+|+++.+.+++++||+|+|+ |+|+||++++|+|++.|+ +|+++..+++|++++++ +|+++
T Consensus 2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~-G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~----~Ga~~ 76 (174)
T d1e3ia2 2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVF-GLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGATD 76 (174)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCSE
T ss_pred CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEE-CCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHH----hCCCc
Confidence 5789999999999999999889999999999999 569999999999999999 57788889999999887 78999
Q ss_pred eeeCCC-ccHHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCC-eEEEEEcccccccCccccccccCCCcEEEEEec
Q psy1119 618 IGNSRD-TSFEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQG-GRFLEIGKFDLANNNMLGMEVFMRETSFHGVML 694 (1392)
Q Consensus 618 i~~s~~-~~~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~-Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~ 694 (1392)
++|++. ++..+.+.+.|.++|+|+||||++. +.++.++++++++ |+++.+|..... ..++...+..+.++.|...
T Consensus 77 ~i~~~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~--~~i~~~~~~~~k~i~Gs~~ 154 (174)
T d1e3ia2 77 CLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDE--MTIPTVDVILGRSINGTFF 154 (174)
T ss_dssp EECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSE--EEEEHHHHHTTCEEEECSG
T ss_pred ccCCccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCc--cccchHHHhccCEEEEEEe
Confidence 998754 3456667777788899999999976 5789999999996 999999975322 2222222234567888765
Q ss_pred hh
Q psy1119 695 DN 696 (1392)
Q Consensus 695 ~~ 696 (1392)
.+
T Consensus 155 Gs 156 (174)
T d1e3ia2 155 GG 156 (174)
T ss_dssp GG
T ss_pred eC
Confidence 54
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.78 E-value=1.4e-18 Score=197.97 Aligned_cols=179 Identities=17% Similarity=0.115 Sum_probs=149.9
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHH-hcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIW-KSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l-~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
-.++|++|||||++|||+++|+.|+++|++ |++++|+..+. .+..+++ +..|.++..+.||+++.++++++++.+
T Consensus 22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~-Vii~~r~~~~l---~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~ 97 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQ-CVIASRKMDVL---KATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL 97 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHH---HHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEECCHHHH---HHHHHHHHHhcCCceEEEEecccChHHHHHHhhhh
Confidence 457999999999999999999999999997 88999985332 2233333 345788999999999999999999998
Q ss_pred -hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhh-h--CCCCCeEEEecccccccCCCCChhHH
Q psy1119 857 -NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRT-M--CPTLGQFVVFSSVSCGRGNAGQTNYG 932 (1392)
Q Consensus 857 -~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~-~--~~~l~~fV~~SS~s~~~G~~gq~~Ya 932 (1392)
+++++||++|||||......+.+++.++|...+..+..+.+.+.+.... + ....+.++++||.++..+.++++.|+
T Consensus 98 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ys 177 (294)
T d1w6ua_ 98 IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA 177 (294)
T ss_dssp HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred hhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHH
Confidence 6799999999999999999999999999999999999999888655422 2 23457789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 933 MANSIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 933 aana~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
++|+++.+|+++.+.+. ..+-+|..|.+
T Consensus 178 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i 209 (294)
T d1w6ua_ 178 SAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPI 209 (294)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred HHHHHHHHHHHHHHHHHhHhCeEEEEEccCcc
Confidence 99999999999988774 44555555554
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=99.78 E-value=9.5e-19 Score=183.08 Aligned_cols=152 Identities=17% Similarity=0.183 Sum_probs=123.0
Q ss_pred HhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCce
Q psy1119 540 LEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENI 618 (1392)
Q Consensus 540 ~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i 618 (1392)
+.|||++.|++.|||+++.+.+++++||+|||+| +||+|++++|+|+++|+ +|+++..+++|++++++ +|++++
T Consensus 2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~G-aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~----lGa~~~ 76 (174)
T d1p0fa2 2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGATEC 76 (174)
T ss_dssp CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCSEE
T ss_pred HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CCchhHHHHHHHHHcCCceeeccCChHHHHHHHHH----cCCcEE
Confidence 4579999999999999998999999999999996 59999999999999998 68888889999999987 799999
Q ss_pred eeCCCcc-HHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccC-CeEEEEEcccccccCccccccccCCCcEEEEEech
Q psy1119 619 GNSRDTS-FEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQ-GGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLD 695 (1392)
Q Consensus 619 ~~s~~~~-~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~-~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~ 695 (1392)
+|+++.+ ..+.+.+.+.++|+|+|||+.+. +.+..++.++++ +|+++.+|........++....+.+++++.|+.+.
T Consensus 77 i~~~~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G 156 (174)
T d1p0fa2 77 LNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFG 156 (174)
T ss_dssp ECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGG
T ss_pred EcCCCchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeC
Confidence 9977644 34555566666799999999976 567788887766 59999999754433333333345578899998655
Q ss_pred h
Q psy1119 696 N 696 (1392)
Q Consensus 696 ~ 696 (1392)
.
T Consensus 157 ~ 157 (174)
T d1p0fa2 157 G 157 (174)
T ss_dssp G
T ss_pred C
Confidence 4
|
| >d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.78 E-value=3.6e-19 Score=181.07 Aligned_cols=132 Identities=17% Similarity=0.147 Sum_probs=114.3
Q ss_pred eEeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEE
Q psy1119 424 YINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGR 503 (1392)
Q Consensus 424 ~l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGv 503 (1392)
++...++|.++.|++.+.+.|. ++++||+|||.|+|||+.|++++.|.++.. ..|.++|+|++|+
T Consensus 3 ~i~~~~~G~pe~l~~~e~~~P~--------p~~~eVlVkv~a~~in~~D~~~~~G~~~~~-------~~p~~~G~e~~G~ 67 (147)
T d1qora1 3 RIEFHKHGGPEVLQAVEFTPAD--------PAENEIQVENKAIGINFIDTYIRSGLYPPP-------SLPSGLGTEAAGI 67 (147)
T ss_dssp EEEBSSCCSGGGCEEEECCCCC--------CCTTEEEEEEEEEECCHHHHHHHHTSSCCS-------SSSBCCCSCEEEE
T ss_pred EEEEcccCCCceeEEEEecCCC--------CCCCEEEEEEEEecccceeeeeecCCCCCC-------cceeeeccccccc
Confidence 4667789999999999999886 789999999999999999999999987643 2378999999999
Q ss_pred Ee---------eCCCeEEEee-cCCcccceEEecccceEEcCCCCCHh--hHhhhhHHHHHHHHHHHHhcCCCCCCEEEE
Q psy1119 504 LR---------DSGKRVMGLT-SGRSLANCCETDVEMAWEIPDQWTLE--DAATVPCVYATAVYAMFICGQMQKGESILI 571 (1392)
Q Consensus 504 V~---------~vGdrV~gl~-~~g~~a~~v~~~~~~~~~iPd~ls~e--~AA~lp~~~~TA~~aL~~~a~l~~GetVLI 571 (1392)
|. ++||||+... ..|+|++|+.++++.++++|++++++ +|+++|+.++|+++++.. +++++|++|||
T Consensus 68 V~~vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI 146 (147)
T d1qora1 68 VSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI 146 (147)
T ss_dssp EEEECTTCCSCCTTCEEEESCCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred eeeeeeecccccccceeeeeccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence 97 4789997543 46899999999999999999999887 445668888999999865 68999999998
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.78 E-value=1.2e-18 Score=193.79 Aligned_cols=174 Identities=15% Similarity=0.120 Sum_probs=141.1
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCc-eEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGAR-KLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr-~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.|++|||||++|||+++|+.|+++|+. +|++++|+..+..+ + -+..+.++.++.||+++.++++++++.+ +.
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~----l--~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 76 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE----L--KSIKDSRVHVLPLTVTCDKSLDTFVSKVGEI 76 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH----H--HTCCCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHH----H--HHhhCCceEEEEEecCCHHHHHHHHHHHHHH
Confidence 489999999999999999999999985 68888998643322 1 1334668899999999999999999998 45
Q ss_pred cC--CccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC-------------CCCeEEEecccccc
Q psy1119 859 LG--PVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCP-------------TLGQFVVFSSVSCG 922 (1392)
Q Consensus 859 ~g--~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~-------------~l~~fV~~SS~s~~ 922 (1392)
++ +||.+|||||+... .++.+.+.++|++++++|+.|++++.+++.+++. ..+.++++||..+.
T Consensus 77 ~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~ 156 (250)
T d1yo6a1 77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS 156 (250)
T ss_dssp HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred hCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccc
Confidence 55 59999999998754 6889999999999999999999999998866542 12678888887665
Q ss_pred cC-------CCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 923 RG-------NAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 923 ~G-------~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
.+ ..+...|+++|+++.+|++..+.+ |..+.+|..|.+
T Consensus 157 ~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v 205 (250)
T d1yo6a1 157 ITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWV 205 (250)
T ss_dssp STTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC
T ss_pred ccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCC
Confidence 43 334567999999999999998866 556677777765
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=3.7e-18 Score=189.47 Aligned_cols=181 Identities=23% Similarity=0.237 Sum_probs=147.6
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N 857 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~ 857 (1392)
.++|++|||||++|||+++|+.|+++|++ |++++|+....+ +..+++ +.......+|+.+.++++.....+ .
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~---~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQGAS-AVLLDLPNSGGE---AQAKKL---GNNCVFAPADVTSEKDVQTALALAKG 75 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECTTSSHH---HHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChHHHH---HHHHHh---CCCccccccccccccccccccccccc
Confidence 36899999999999999999999999997 889999864432 233333 567888999999999999999987 5
Q ss_pred hcCCccEEEECcccCCCc------cccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--------CCCeEEEeccccccc
Q psy1119 858 KLGPVDGIFNLAVVLKDA------LFENQTPEDFNASLGPKANATKYFDKYSRTMCP--------TLGQFVVFSSVSCGR 923 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~------~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--------~l~~fV~~SS~s~~~ 923 (1392)
.++.+|.+++++++...+ ++.+.+.++|+++++.|+.|++++.+++.+++. ..+.||++||+++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~ 155 (248)
T d2o23a1 76 KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE 155 (248)
T ss_dssp HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred ccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc
Confidence 678999999998876543 567788999999999999999999998855431 236899999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHcC----CCeEEEEccccCcccccc
Q psy1119 924 GNAGQTNYGMANSIMERICEARRAEG----LPGLAVEWGAVGEVGLVA 967 (1392)
Q Consensus 924 G~~gq~~Yaaana~ld~la~~r~~~G----lp~~ai~~g~~~~~G~~~ 967 (1392)
|.++++.|+++|+++++|++..+.+. ..+.+|..|.+. +.|..
T Consensus 156 ~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~-T~~~~ 202 (248)
T d2o23a1 156 GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFG-TPLLT 202 (248)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC-CC---
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCcee-cchhh
Confidence 99999999999999999999998874 445666666653 34433
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=99.77 E-value=1.9e-18 Score=180.60 Aligned_cols=150 Identities=22% Similarity=0.337 Sum_probs=124.9
Q ss_pred CHhhHhhhhHHHHHHHHHHHHhc-CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcC
Q psy1119 539 TLEDAATVPCVYATAVYAMFICG-QMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEE 616 (1392)
Q Consensus 539 s~e~AA~lp~~~~TA~~aL~~~a-~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~ 616 (1392)
.+.+||+++|+++|||+++.+.+ .+++|++|||+| +|++|++++|+|+++|+ .|+++..+++|++++++ ++++
T Consensus 5 ~l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~G-aG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~----~ga~ 79 (172)
T d1h2ba2 5 KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVG-VGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----LGAD 79 (172)
T ss_dssp HHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----TTCS
T ss_pred hHHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeC-CChHHHHHHHHHHhhcCcccccccchhHHHHHHhh----cccc
Confidence 36789999999999999998766 489999999996 59999999999999998 56677888899999987 6889
Q ss_pred ceeeCCCccHHHHHHHHcCCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEech
Q psy1119 617 NIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLD 695 (1392)
Q Consensus 617 ~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~ 695 (1392)
+++|+++. ..+.+++.|+++|+|+|+|++++. .++.++++++++||++.+|..+ ........++.|+++++|+...
T Consensus 80 ~~i~~~~~-~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~--~~~~~~~~l~~k~~~i~Gs~~~ 156 (172)
T d1h2ba2 80 HVVDARRD-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG--ELRFPTIRVISSEVSFEGSLVG 156 (172)
T ss_dssp EEEETTSC-HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS--CCCCCHHHHHHTTCEEEECCSC
T ss_pred eeecCccc-HHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc--cccCCHHHHHhCCcEEEEEEec
Confidence 99998765 456677899999999999999875 6899999999999999999532 2222234567899999998654
Q ss_pred h
Q psy1119 696 N 696 (1392)
Q Consensus 696 ~ 696 (1392)
.
T Consensus 157 ~ 157 (172)
T d1h2ba2 157 N 157 (172)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=4.1e-19 Score=181.07 Aligned_cols=134 Identities=13% Similarity=0.169 Sum_probs=117.9
Q ss_pred EeeccCCCCCCceEE-eCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEE
Q psy1119 425 INALVRGDMSSLTWE-QGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGR 503 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~-~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGv 503 (1392)
+.+.++|+++.|++. +.|.|. +++|||+|||.|+|||+.|++.+.|.++.. ...|.++|||++|+
T Consensus 6 v~~~~~G~p~~l~~~~~~~~P~--------~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~------~~~p~i~G~e~~G~ 71 (150)
T d1yb5a1 6 VRVFEFGGPEVLKLRSDIAVPI--------PKDHQVLIKVHACGVNPVETYIRSGTYSRK------PLLPYTPGSDVAGV 71 (150)
T ss_dssp EEESSCSSGGGEEEEEEEECCC--------CCTTEEEEEEEEEECCHHHHHHHHTCSSCC------CCSSBCCCSCEEEE
T ss_pred EEEEccCCcceEEEEeecCCCC--------CCCCeEEEEEEEecCcccchhhhcCCcCcc------ccccccCccceeee
Confidence 566778999999885 567775 689999999999999999999999987543 12477999999999
Q ss_pred Ee---------eCCCeEEEee-cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEE
Q psy1119 504 LR---------DSGKRVMGLT-SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIH 572 (1392)
Q Consensus 504 V~---------~vGdrV~gl~-~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ 572 (1392)
|+ ++||||++.. ..|+|+||+.++++.++++|+++|+++||++++++.|+|+++...+..++|++|||.
T Consensus 72 V~~vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL 150 (150)
T d1yb5a1 72 IEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL 150 (150)
T ss_dssp EEEECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred eEeecceeeccccCccccccccccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence 97 4789998764 458999999999999999999999999999999999999999999999999999983
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=99.77 E-value=2.5e-18 Score=180.55 Aligned_cols=153 Identities=16% Similarity=0.237 Sum_probs=124.4
Q ss_pred CHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCc
Q psy1119 539 TLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEEN 617 (1392)
Q Consensus 539 s~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~ 617 (1392)
++|+||+++|+++|||+++.+.+++++||+|||+|+ ||+|++++|+|+..|+ +|+++..+++|++++++ +++++
T Consensus 2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~----~Ga~~ 76 (176)
T d2jhfa2 2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGATE 76 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCSE
T ss_pred CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH----hCCee
Confidence 589999999999999999999999999999999976 8999999999999996 78899999999999887 68889
Q ss_pred eeeCCC-ccHHHHHHHHcCCCcceEEEecCchh-HHHHHHhcccCCe-EEEEEcccccccCccccccccCCCcEEEEEec
Q psy1119 618 IGNSRD-TSFEQLVMKRTKGRGVDLVLNSLAEE-KLQASVRCLAQGG-RFLEIGKFDLANNNMLGMEVFMRETSFHGVML 694 (1392)
Q Consensus 618 i~~s~~-~~~~~~i~~~T~g~GvDvVlds~~~~-~l~~s~~~La~~G-r~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~ 694 (1392)
++++++ .+..+.+++.+.++|+|+|||+.+.+ ....++.+++++| +++..+...........+..+.+++++.|+..
T Consensus 77 ~i~~~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~ 156 (176)
T d2jhfa2 77 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIF 156 (176)
T ss_dssp EECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSG
T ss_pred EEecCCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEE
Confidence 888755 34556666777778999999999764 6788899998875 55555544433334444566779999999865
Q ss_pred hh
Q psy1119 695 DN 696 (1392)
Q Consensus 695 ~~ 696 (1392)
.+
T Consensus 157 G~ 158 (176)
T d2jhfa2 157 GG 158 (176)
T ss_dssp GG
T ss_pred eC
Confidence 54
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.77 E-value=1.1e-18 Score=182.82 Aligned_cols=153 Identities=15% Similarity=0.205 Sum_probs=129.0
Q ss_pred CHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCc
Q psy1119 539 TLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEEN 617 (1392)
Q Consensus 539 s~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~ 617 (1392)
++|+||.++|++.|+|+|+.+.+++++||+|+|+| +||+|++++|+|+++|+ +|++++.+++|++++++ +|+++
T Consensus 3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~----~GA~~ 77 (176)
T d1d1ta2 3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA----VGATE 77 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----HTCSE
T ss_pred CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh----cCCcE
Confidence 58999999999999999998899999999999995 59999999999999996 79999999999999987 78999
Q ss_pred eeeCCCcc-HHHHHHHHcCCCcceEEEecCchh-HHHHHHhcccCC-eEEEEEcccccccCccccccccCCCcEEEEEec
Q psy1119 618 IGNSRDTS-FEQLVMKRTKGRGVDLVLNSLAEE-KLQASVRCLAQG-GRFLEIGKFDLANNNMLGMEVFMRETSFHGVML 694 (1392)
Q Consensus 618 i~~s~~~~-~~~~i~~~T~g~GvDvVlds~~~~-~l~~s~~~La~~-Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~ 694 (1392)
++|+++.+ ..+.+.+.|.++|+|+|+|+.+.. .++.++.++.++ |+++.+|.........+.+..+.++.++.|+..
T Consensus 78 ~in~~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~ 157 (176)
T d1d1ta2 78 CISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVF 157 (176)
T ss_dssp EECGGGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSG
T ss_pred EECccccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEE
Confidence 99987654 467788889999999999999864 577777766555 999999976554444444445567889999865
Q ss_pred hh
Q psy1119 695 DN 696 (1392)
Q Consensus 695 ~~ 696 (1392)
.+
T Consensus 158 G~ 159 (176)
T d1d1ta2 158 GG 159 (176)
T ss_dssp GG
T ss_pred eC
Confidence 54
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=4e-18 Score=188.49 Aligned_cols=170 Identities=17% Similarity=0.226 Sum_probs=139.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
..+|++|||||++|||+++|+.|+++|++ |++++|+.. .++++.+. ..+....+|+.+.+.++.+.+ .
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~-Vi~~~r~~~-------~l~~~~~~-~~~~~~~~d~~~~~~~~~~~~---~ 71 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAK-VIATDINES-------KLQELEKY-PGIQTRVLDVTKKKQIDQFAN---E 71 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHH-------HHGGGGGS-TTEEEEECCTTCHHHHHHHHH---H
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEeCCHH-------HHHHHHhc-cCCceeeeecccccccccccc---c
Confidence 46899999999999999999999999996 898999731 12333332 235667889998877665544 4
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEecccccc-cCCCCChhHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVFSSVSCG-RGNAGQTNYGMAN 935 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~SS~s~~-~G~~gq~~Yaaan 935 (1392)
++.||++|||||....+++.+++.++|+.++++++.+++++.+++.+++ ...+.+|++||+++. .|.++++.|+++|
T Consensus 72 ~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sK 151 (245)
T d2ag5a1 72 VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTK 151 (245)
T ss_dssp CSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHH
T ss_pred cccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHH
Confidence 6899999999999999999999999999999999999999999886643 245799999998775 5889999999999
Q ss_pred HHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 936 SIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+++++|++..+.+ |..+-+|..|.+
T Consensus 152 aal~~l~r~lA~e~~~~gIrvN~I~PG~i 180 (245)
T d2ag5a1 152 AAVIGLTKSVAADFIQQGIRCNCVCPGTV 180 (245)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEESCE
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEeecee
Confidence 9999999998877 455566666655
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.76 E-value=2.5e-18 Score=179.06 Aligned_cols=149 Identities=21% Similarity=0.306 Sum_probs=122.3
Q ss_pred CCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcC
Q psy1119 537 QWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEE 616 (1392)
Q Consensus 537 ~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~ 616 (1392)
+.+++++|.++|+..|+|+++ +.+++++||+|||+| +|+||++++|+|+++||++++++.+++|++++++ ++++
T Consensus 3 ~~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~G-aG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~----lGad 76 (168)
T d1uufa2 3 QEQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVG-IGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----LGAD 76 (168)
T ss_dssp GGGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTCS
T ss_pred cccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEec-cchHHHHHHHHhhcccccchhhccchhHHHHHhc----cCCc
Confidence 346888999999999999999 578999999999996 5999999999999999999999999999999987 7899
Q ss_pred ceeeCCCccHHHHHHHHcCCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEech
Q psy1119 617 NIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLD 695 (1392)
Q Consensus 617 ~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~ 695 (1392)
+++|+.+.+.. .+..+|+|+|||+++.. .+..++++++++|+++.+|...........+.++.+++++.|+...
T Consensus 77 ~~i~~~~~~~~-----~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~ 151 (168)
T d1uufa2 77 EVVNSRNADEM-----AAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIG 151 (168)
T ss_dssp EEEETTCHHHH-----HTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSC
T ss_pred EEEECchhhHH-----HHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeec
Confidence 99998876543 34557999999999864 6999999999999999999654333333334566799999998654
Q ss_pred h
Q psy1119 696 N 696 (1392)
Q Consensus 696 ~ 696 (1392)
.
T Consensus 152 ~ 152 (168)
T d1uufa2 152 G 152 (168)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.76 E-value=2e-18 Score=179.76 Aligned_cols=164 Identities=16% Similarity=0.167 Sum_probs=128.0
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCc
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEEN 617 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~ 617 (1392)
+++|.||++.|++.|||+++. ++++++||+|+|+|+ |++|++++|+|+++||+|++++.+++|++++++ +|+++
T Consensus 1 lp~e~AApl~cag~Ta~~al~-~~~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~----lGa~~ 74 (168)
T d1piwa2 1 IPSHLAAPLLCGGLTVYSPLV-RNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK----MGADH 74 (168)
T ss_dssp SCHHHHGGGGTHHHHHHHHHH-HTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTCSE
T ss_pred CCHHHHHHHHHHHHHHHHHHH-HhCcCCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc----cCCcE
Confidence 356889999999999999995 679999999999965 999999999999999999999999999999987 68899
Q ss_pred eeeCCCc-cHHHHHHHHcCCCcceEEEecCchh---HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEe
Q psy1119 618 IGNSRDT-SFEQLVMKRTKGRGVDLVLNSLAEE---KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVM 693 (1392)
Q Consensus 618 i~~s~~~-~~~~~i~~~T~g~GvDvVlds~~~~---~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~ 693 (1392)
++|+.+. ++.+ . . ..++|+++++.+.. .+..++++++++|+++.+|...... ......++.|++++.|+.
T Consensus 75 ~i~~~~~~~~~~---~-~-~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~k~~~i~Gs~ 148 (168)
T d1piwa2 75 YIATLEEGDWGE---K-Y-FDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHE-MLSLKPYGLKAVSISYSA 148 (168)
T ss_dssp EEEGGGTSCHHH---H-S-CSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSC-CEEECGGGCBSCEEEECC
T ss_pred EeeccchHHHHH---h-h-hcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccc-cccHHHHHhCCcEEEEEe
Confidence 9987654 3322 2 2 35899999987642 4678999999999999999654322 222345677899999976
Q ss_pred chhhhhhCHHHHHHHHHHHHHHHHcCCCC
Q psy1119 694 LDNFFFAEQEWKMSLQKALQKAIDAGAVQ 722 (1392)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~l~~g~l~ 722 (1392)
..+ ++. .+.+.+++++|++|
T Consensus 149 ~g~-----~~~----~~e~l~li~~gkIk 168 (168)
T d1piwa2 149 LGS-----IKE----LNQLLKLVSEKDIK 168 (168)
T ss_dssp CCC-----HHH----HHHHHHHHHHTTCC
T ss_pred eCC-----HHH----HHHHHHHHHhCCCC
Confidence 543 211 23445677778765
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.75 E-value=9e-18 Score=190.11 Aligned_cols=173 Identities=15% Similarity=0.111 Sum_probs=128.9
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-CCceEE-----------------EEeccCC
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-YDVQVL-----------------ISTDDIT 844 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-~G~~v~-----------------~~~~Dv~ 844 (1392)
++|||||++|||+++|+.|+++|++ |+++.|+.. ...+...+++.. .+..+. ...+|++
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga~-V~i~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~ 80 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGYA-VCLHYHRSA--AEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT 80 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCH--HHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCE-EEEEeCCCH--HHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCC
Confidence 7899999999999999999999998 666555432 223333334432 233333 3456799
Q ss_pred CHHHHHHHHHHH-hhcCCccEEEECcccCCCccccCCCHHHHH--------------HHHhhHhHHHHHHHHHHhhhC--
Q psy1119 845 TEAGVVNLLTEA-NKLGPVDGIFNLAVVLKDALFENQTPEDFN--------------ASLGPKANATKYFDKYSRTMC-- 907 (1392)
Q Consensus 845 ~~~~v~~l~~~~-~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~--------------~~~~~kv~g~~~L~~~~~~~~-- 907 (1392)
+.++++++++++ +++|+||++|||||+....++.+++.++|+ .++..|+.+++++.+...+.+
T Consensus 81 ~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 160 (284)
T d1e7wa_ 81 LFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG 160 (284)
T ss_dssp HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhh
Confidence 999999999998 779999999999999999999888887765 478999999999988754321
Q ss_pred ------CCCCeEEEecccccccCCCCChhHHHHHHHHHHHHHHHHHcC----CCeEEEEcc
Q psy1119 908 ------PTLGQFVVFSSVSCGRGNAGQTNYGMANSIMERICEARRAEG----LPGLAVEWG 958 (1392)
Q Consensus 908 ------~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~la~~r~~~G----lp~~ai~~g 958 (1392)
...+.+|+++|.++..+.++++.|+++|+++.+|++..+.+. ..+-+|..|
T Consensus 161 ~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG 221 (284)
T d1e7wa_ 161 TPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPG 221 (284)
T ss_dssp SCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred hHHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccc
Confidence 123679999999999999999999999999999999998774 334455444
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.75 E-value=4.9e-18 Score=186.91 Aligned_cols=167 Identities=13% Similarity=0.111 Sum_probs=138.6
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~ 858 (1392)
.+|++|||||++|||+++|+.|+++|++ |++++|+... .........+|.++.++++.+.+.+ +.
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~-V~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWW-VASIDVVENE-------------EASASVIVKMTDSFTEQADQVTAEVGKL 66 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCE-EEEEESSCCT-------------TSSEEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCccc-------------cccccceeecccCcHHHHHHHHHHHHHH
Confidence 3689999999999999999999999997 7777776421 1234456788999999988888776 33
Q ss_pred --cCCccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHH
Q psy1119 859 --LGPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMAN 935 (1392)
Q Consensus 859 --~g~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaan 935 (1392)
.++||++|||||.... .++.+.+.++|+++++.|+.+++++.+++.+++.+.+.||++||.++..+.++.+.|+++|
T Consensus 67 ~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asK 146 (236)
T d1dhra_ 67 LGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAK 146 (236)
T ss_dssp HTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred hCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccHHHH
Confidence 4589999999997554 5667788899999999999999999999888777779999999999999999999999999
Q ss_pred HHHHHHHHHHHHcC------CCeEEEEcccc
Q psy1119 936 SIMERICEARRAEG------LPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~G------lp~~ai~~g~~ 960 (1392)
+++.+|++..+.+- ..+.+|..|.+
T Consensus 147 aal~~lt~~la~El~~~~~gI~vn~v~PG~v 177 (236)
T d1dhra_ 147 GAVHQLCQSLAGKNSGMPSGAAAIAVLPVTL 177 (236)
T ss_dssp HHHHHHHHHHTSTTSSCCTTCEEEEEEESCE
T ss_pred HHHHHHHHHHHHHhccCCCcEEEEEEEeccC
Confidence 99999999998762 33455555543
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=99.74 E-value=1e-17 Score=175.63 Aligned_cols=153 Identities=17% Similarity=0.209 Sum_probs=123.2
Q ss_pred CHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCc
Q psy1119 539 TLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEEN 617 (1392)
Q Consensus 539 s~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~ 617 (1392)
++++||.++|++.|+|+++.+.+++++||+|+|+|+ ||+|++++++++..|+ +|+++.++++|++++++ +|+++
T Consensus 2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~----~GAd~ 76 (175)
T d1cdoa2 2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGATD 76 (175)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCCE
T ss_pred CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH----cCCcE
Confidence 589999999999999999999999999999999965 9999999999999888 68888889999999987 79999
Q ss_pred eeeCCCcc-HHHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEech
Q psy1119 618 IGNSRDTS-FEQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVMLD 695 (1392)
Q Consensus 618 i~~s~~~~-~~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~~~ 695 (1392)
++|+.+.+ ..+.+++.+.++|+|+|+|++++ ..+..++.+++++|..+.++...........+..+.+++++.|+.+.
T Consensus 77 ~in~~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G 156 (175)
T d1cdoa2 77 FVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFG 156 (175)
T ss_dssp EECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGG
T ss_pred EEcCCCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEe
Confidence 99987654 46778888888899999999986 46788889888875554444333232333334445678899998655
Q ss_pred h
Q psy1119 696 N 696 (1392)
Q Consensus 696 ~ 696 (1392)
.
T Consensus 157 ~ 157 (175)
T d1cdoa2 157 G 157 (175)
T ss_dssp G
T ss_pred C
Confidence 4
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.74 E-value=7.6e-18 Score=185.29 Aligned_cols=165 Identities=13% Similarity=0.154 Sum_probs=136.7
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-h--h
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-N--K 858 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~--~ 858 (1392)
+.+|||||++|||+++|+.|+++|++ |++++|+... .........+|+++.++.....+.+ . +
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~-V~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYT-VLNIDLSAND-------------QADSNILVDGNKNWTEQEQSILEQTASSLQ 68 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEE-EEEEESSCCT-------------TSSEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCchh-------------cccccceeccccCchhHHHHHHHHHHHHhc
Confidence 55799999999999999999999997 8888998532 1223456678999988888777765 2 4
Q ss_pred cCCccEEEECcccCCC-ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKD-ALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSI 937 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d-~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ 937 (1392)
+++||++|||||+... .++.+.+.++|+..++.|+.+++++.+++.+++.+.+.+|++||+++..+.++++.|+++|++
T Consensus 69 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa 148 (235)
T d1ooea_ 69 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAA 148 (235)
T ss_dssp TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred CCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchHHHHHH
Confidence 6999999999998655 456677778999999999999999999998877777999999999999999999999999999
Q ss_pred HHHHHHHHHHcC------CCeEEEEcccc
Q psy1119 938 MERICEARRAEG------LPGLAVEWGAV 960 (1392)
Q Consensus 938 ld~la~~r~~~G------lp~~ai~~g~~ 960 (1392)
+.+|++..+.+- ..+.+|..|.+
T Consensus 149 l~~l~~~la~e~~~~~~~i~v~~i~Pg~~ 177 (235)
T d1ooea_ 149 VHHLTSSLAAKDSGLPDNSAVLTIMPVTL 177 (235)
T ss_dssp HHHHHHHHHSTTSSCCTTCEEEEEEESCB
T ss_pred HHHHHHHHHHHhccCCCceEEEEEecCcC
Confidence 999999987662 22445555544
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=1.1e-17 Score=174.52 Aligned_cols=148 Identities=18% Similarity=0.266 Sum_probs=123.2
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcC
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEE 616 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~ 616 (1392)
+|+|+||.+. |+++||+++ +++++++||+|+|+|+ |++|++++|+|+++|+ +|+++..+++|++++++ +|++
T Consensus 1 vS~e~Aal~e-pla~a~~a~-~~~~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~----~Ga~ 73 (171)
T d1pl8a2 1 VTFEEGALIE-PLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGAD 73 (171)
T ss_dssp SCHHHHHHHH-HHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS
T ss_pred CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHH----hCCc
Confidence 5899999774 899999998 5689999999999965 9999999999999999 79999999999999986 7899
Q ss_pred ceeeCCCccHHHHHH--HHcCCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEEEe
Q psy1119 617 NIGNSRDTSFEQLVM--KRTKGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHGVM 693 (1392)
Q Consensus 617 ~i~~s~~~~~~~~i~--~~T~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g~~ 693 (1392)
++.+..+.++.+..+ ..+.|.|+|+|+|+++.+ .++.++++++++|+++.+|...... ......++.|++++.|+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~-~~~~~~~~~k~l~i~Gs~ 152 (171)
T d1pl8a2 74 LVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMT-TVPLLHAAIREVDIKGVF 152 (171)
T ss_dssp EEEECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCC-CCCHHHHHHTTCEEEECC
T ss_pred ccccccccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCC-ccCHHHHHHCCcEEEEEe
Confidence 999988877655444 345678999999999865 6899999999999999999764322 222235567899999874
|
| >d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.74 E-value=1.1e-18 Score=178.49 Aligned_cols=133 Identities=12% Similarity=0.097 Sum_probs=114.2
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
+.+.++|+...+.+.+.|.|+ +++|||+|||+|+|||++|++.+.|..+.. ...|.++|+|++|+|
T Consensus 7 ~v~~~~~~~~~~~i~~v~~P~--------~~~~eVlVkV~a~gin~~D~~~~~g~~~~~------~~~p~v~g~e~~G~v 72 (152)
T d1xa0a1 7 FVVNKTETEFTAGVQTISMDD--------LPEGDVLVRVHYSSVNYKDGLASIPDGKIV------KTYPFVPGIDLAGVV 72 (152)
T ss_dssp EEEEEETTEEEEEEEEEEGGG--------SCSCSEEEEEEEEECCHHHHHHTSGGGSSC------CSSSBCCCSEEEEEE
T ss_pred EEEEecCCceEEEEEEccCCC--------CCCCEEEEEEEEeCCChHHHHHHhhccccc------ccccceeeeeeeeee
Confidence 456667887788889999886 689999999999999999999998875432 124789999999998
Q ss_pred e-------eCCCeEEEee------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEE
Q psy1119 505 R-------DSGKRVMGLT------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILI 571 (1392)
Q Consensus 505 ~-------~vGdrV~gl~------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI 571 (1392)
. ++||+|++.. .+|+||||+.+|++.++++|+++|+ +||++++++.||++++..+++++ |++|||
T Consensus 73 ~~~~~~~~~~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~~~~iP~~l~~-~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~ 150 (152)
T d1xa0a1 73 VSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLER-IAQEISLAELPQALKRILRGELR-GRTVVR 150 (152)
T ss_dssp EECCSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTHHH-HEEEEEGGGHHHHHHHHHHTCCC-SEEEEE
T ss_pred eccCCCccccCCEEEEecCccccccCCCcceeeeehhhccccCCCCCCH-HHHHHHHHHHHHHHHHHHhcCCC-CCEEEE
Confidence 6 5899998764 3589999999999999999999985 78899999999999999999886 999999
Q ss_pred Ec
Q psy1119 572 HA 573 (1392)
Q Consensus 572 ~g 573 (1392)
.|
T Consensus 151 l~ 152 (152)
T d1xa0a1 151 LA 152 (152)
T ss_dssp CC
T ss_pred cC
Confidence 74
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=99.73 E-value=2e-17 Score=172.53 Aligned_cols=147 Identities=16% Similarity=0.202 Sum_probs=117.5
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCc
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEEN 617 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~ 617 (1392)
+|+|+||.+. |++|||+++ .++++++||+|+|+| +|++|++++|+|+++|++|++++.+++|++++++ +++++
T Consensus 1 VS~e~Aal~e-Pla~a~~a~-~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~----~ga~~ 73 (170)
T d1e3ja2 1 VSLEEGALLE-PLSVGVHAC-RRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGADV 73 (170)
T ss_dssp SCHHHHHTHH-HHHHHHHHH-HHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCSE
T ss_pred CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH----cCCcE
Confidence 5899999874 789999998 567899999999995 6999999999999999999999999999999987 56776
Q ss_pred eeeCC--CccHH---HHHHHHcCCCcceEEEecCchh-HHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEE
Q psy1119 618 IGNSR--DTSFE---QLVMKRTKGRGVDLVLNSLAEE-KLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHG 691 (1392)
Q Consensus 618 i~~s~--~~~~~---~~i~~~T~g~GvDvVlds~~~~-~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g 691 (1392)
.++.. +.+.. +.+. .+.|.|+|+|||+++++ .++.++++++++|+++.+|..... .......++.|++++.|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~-~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~-~~~~~~~~~~k~i~i~g 151 (170)
T d1e3ja2 74 TLVVDPAKEEESSIIERIR-SAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQM-VTVPLVNACAREIDIKS 151 (170)
T ss_dssp EEECCTTTSCHHHHHHHHH-HHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSC-CCCCHHHHHTTTCEEEE
T ss_pred EEeccccccccchhhhhhh-cccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCC-CCcCHHHHHHCCCEEEE
Confidence 65433 33333 3333 34567999999999875 689999999999999999976432 22222356789999998
Q ss_pred Ee
Q psy1119 692 VM 693 (1392)
Q Consensus 692 ~~ 693 (1392)
+.
T Consensus 152 s~ 153 (170)
T d1e3ja2 152 VF 153 (170)
T ss_dssp CC
T ss_pred EE
Confidence 74
|
| >d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=99.73 E-value=1.2e-18 Score=183.19 Aligned_cols=129 Identities=19% Similarity=0.229 Sum_probs=109.8
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-------- 505 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-------- 505 (1392)
..|++.+.|.|. ++++||+|||.|+|||++|++.+.|..... .....|.++|||++|+|+
T Consensus 11 ~~l~~~e~~~P~--------~~~~evlVkv~a~gic~sD~~~~~~~~~~~----~~~~~p~i~GhE~~G~Vv~vG~~v~~ 78 (178)
T d1e3ja1 11 NDLRLEQRPIPE--------PKEDEVLLQMAYVGICGSDVHYYEHGRIAD----FIVKDPMVIGHEASGTVVKVGKNVKH 78 (178)
T ss_dssp TEEEEEECCCCC--------CCTTEEEEEEEEEEECHHHHHHHHHSBSSS----CBCCSCEECCCEEEEEEEEECTTCCS
T ss_pred CcEEEEEeECCC--------CCCCEEEEEEEEEcccCchhhhhccCcccc----ccccCCeeeccccceEEEecCcccCC
Confidence 458999999986 799999999999999999999887654322 112347899999999997
Q ss_pred -eCCCeEEEe----------------------------ecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHH
Q psy1119 506 -DSGKRVMGL----------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYA 556 (1392)
Q Consensus 506 -~vGdrV~gl----------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~a 556 (1392)
++||||... ..+|+|+||+.+|++.++++|+++|+++||++++++.|||++
T Consensus 79 ~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a 158 (178)
T d1e3ja1 79 LKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDA 158 (178)
T ss_dssp CCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHH
T ss_pred CCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHH
Confidence 478888642 124899999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCEEEEEcCC
Q psy1119 557 MFICGQMQKGESILIHAGS 575 (1392)
Q Consensus 557 L~~~a~l~~GetVLI~ga~ 575 (1392)
+ +.+++++|++|+|.||+
T Consensus 159 ~-~~~~~~~g~~VlVig~C 176 (178)
T d1e3ja1 159 F-EAARKKADNTIKVMISC 176 (178)
T ss_dssp H-HHHHHCCTTCSEEEEEC
T ss_pred H-HHhCCCCCCEEEEEccc
Confidence 8 57899999999999876
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.73 E-value=2.6e-17 Score=175.03 Aligned_cols=125 Identities=17% Similarity=0.187 Sum_probs=114.4
Q ss_pred hhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCcee
Q psy1119 541 EDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIG 619 (1392)
Q Consensus 541 e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~ 619 (1392)
++.++++.+++|||+++ +.+++++||+|||+| +|++|++++|+|++.|+ +|++++.+++|++++++ +++++++
T Consensus 2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~G-aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~----~Ga~~~~ 75 (195)
T d1kola2 2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGFEIAD 75 (195)
T ss_dssp HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCEEEE
T ss_pred chHHhcccHHHHHHHHH-HHhCCCCCCEEEEEC-cCHHHHHHHHHHHhhcccceeeecccchhhHhhhh----ccccEEE
Confidence 57788899999999998 679999999999995 59999999999999999 68889999999999986 7899999
Q ss_pred eCCCccHHHHHHHHcCCCcceEEEecCch----------------hHHHHHHhcccCCeEEEEEcccc
Q psy1119 620 NSRDTSFEQLVMKRTKGRGVDLVLNSLAE----------------EKLQASVRCLAQGGRFLEIGKFD 671 (1392)
Q Consensus 620 ~s~~~~~~~~i~~~T~g~GvDvVlds~~~----------------~~l~~s~~~La~~Gr~v~iG~~~ 671 (1392)
++++.++.+.+++.|+|.|+|++||+++. +.++.++++++++||++.+|...
T Consensus 76 ~~~~~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~ 143 (195)
T d1kola2 76 LSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYV 143 (195)
T ss_dssp TTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCC
T ss_pred eCCCcCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecC
Confidence 99999999999999999999999999873 47999999999999999999754
|
| >d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.70 E-value=1.8e-19 Score=186.32 Aligned_cols=140 Identities=15% Similarity=0.122 Sum_probs=118.8
Q ss_pred eEeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEE
Q psy1119 424 YINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGR 503 (1392)
Q Consensus 424 ~l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGv 503 (1392)
.+.+.+.|+..+|++.+.+.|+ +++|||+|||+|+|||++|++.+.|.++... ..|.++|+|++|+
T Consensus 6 a~~~~~~g~~~~l~~~~v~~p~--------l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~------~~~~~~g~e~~G~ 71 (162)
T d1tt7a1 6 ALQAEKNADDVSVHVKTISTED--------LPKDGVLIKVAYSGINYKDGLAGKAGGNIVR------EYPLILGIDAAGT 71 (162)
T ss_dssp EEEECCGGGSCCCEEEEEESSS--------SCSSSEEEEECCEEECHHHHHHTSTTCTTCS------SCSEECCSEEEEE
T ss_pred EEEEEecCCCeEEEEEEcCCCC--------CCCCEEEEEEEEecccchhhheeeecccccc------cceeeeeeecccc
Confidence 4667788999999999999986 6899999999999999999999999876431 2367899999999
Q ss_pred Ee-------eCCCeEEEee------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEE
Q psy1119 504 LR-------DSGKRVMGLT------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESIL 570 (1392)
Q Consensus 504 V~-------~vGdrV~gl~------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVL 570 (1392)
|. ++|++|+... ..|+||||+.+|+++++++|+++|+++||++|+.++|||+++.. .+...+++||
T Consensus 72 v~~~~~~~~~~g~~v~~~~~~~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~-~~~~~~~~Vl 150 (162)
T d1tt7a1 72 VVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLE-ETPGALKDIL 150 (162)
T ss_dssp EEECSSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECST-THHHHHHHTT
T ss_pred cccccccccccceeeEeeeccceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCCCEEE
Confidence 87 5789997753 35899999999999999999999999999999999999987642 3344568899
Q ss_pred EEcCCchH
Q psy1119 571 IHAGSGGV 578 (1392)
Q Consensus 571 I~ga~GgV 578 (1392)
|+|++|++
T Consensus 151 i~ga~G~v 158 (162)
T d1tt7a1 151 QNRIQGRV 158 (162)
T ss_dssp TTCCSSEE
T ss_pred EECCcceE
Confidence 99998864
|
| >d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.70 E-value=2.2e-17 Score=174.77 Aligned_cols=134 Identities=16% Similarity=0.032 Sum_probs=110.6
Q ss_pred eeEeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEE
Q psy1119 423 AYINALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSG 502 (1392)
Q Consensus 423 ~~l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sG 502 (1392)
..+.+..+++...+++++.+.+. ++++||+|||.|+|||++|++.+.|.++.. ..|.++|||++|
T Consensus 8 ka~~~~~~~~~~~~~~~~~~p~p--------~~~~eVlVkv~a~giC~sDl~~~~g~~~~~-------~~P~i~GHE~~G 72 (192)
T d1piwa1 8 EGIAIQSHEDWKNPKKTKYDPKP--------FYDHDIDIKIEACGVCGSDIHCAAGHWGNM-------KMPLVVGHEIVG 72 (192)
T ss_dssp EEEEECCSSSTTSCEEEEECCCC--------CCTTEEEEEEEEEEECHHHHHHHTTTTSCC-------CSSEECCCCEEE
T ss_pred EEEEEeCCCcCCcceEeeccCCC--------CCCCeEEEEEeeeCCCcchHHHHcCCCCCC-------CCCcCccccccc
Confidence 34566778888888887765432 689999999999999999999999987643 247899999999
Q ss_pred EEe----------eCCCeEEE-----------------------------------eecCCcccceEEecccceEEcCCC
Q psy1119 503 RLR----------DSGKRVMG-----------------------------------LTSGRSLANCCETDVEMAWEIPDQ 537 (1392)
Q Consensus 503 vV~----------~vGdrV~g-----------------------------------l~~~g~~a~~v~~~~~~~~~iPd~ 537 (1392)
+|+ ++||||.. +...|+||+|++++++.++++|++
T Consensus 73 ~Vv~vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~ 152 (192)
T d1piwa1 73 KVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPEN 152 (192)
T ss_dssp EEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTT
T ss_pred chhhcccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCC
Confidence 987 36888842 122489999999999999999999
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEE
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIH 572 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ 572 (1392)
+++++||.+.+.+.|||+++ .++++++|++|+|.
T Consensus 153 l~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~ 186 (192)
T d1piwa1 153 IWVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGY 186 (192)
T ss_dssp CCEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence 99998877766678999998 57999999999986
|
| >d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=99.69 E-value=3.7e-17 Score=170.27 Aligned_cols=131 Identities=15% Similarity=0.099 Sum_probs=108.7
Q ss_pred eeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
....+|.+ |++.+.+.|.. ++++||+|||.|+|||++|++.+.|..+.... ...|.++|||++|+|+
T Consensus 4 ~~~~~g~p--l~i~~v~~P~~-------~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~----~~~P~v~GhE~~G~V~ 70 (171)
T d1h2ba1 4 RLHEYNKP--LRIEDVDYPRL-------EGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQ----PKLPYTLGHENVGYIE 70 (171)
T ss_dssp EESSTTSC--CEEECCCCCCC-------BTTBCEEEEEEEEECCHHHHHHHHTTTHHHHC----CCSSEECCCCEEEEEE
T ss_pred EEEeCCCC--CEEEEeeCCCC-------CCCCEEEEEEEecccceeeehccCCCcccccC----Cccccccceeeeeeee
Confidence 34455644 88899998862 36899999999999999999999998754311 2347899999999997
Q ss_pred ---------eCCCeEEEe---------------------------ecCCcccceEEecccceEEcCCCCCHhhHhhhhHH
Q psy1119 506 ---------DSGKRVMGL---------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCV 549 (1392)
Q Consensus 506 ---------~vGdrV~gl---------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~ 549 (1392)
++||||+.. ...|+|+||+.++++.++++|+++|++.||+++++
T Consensus 71 ~vG~~v~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~ 150 (171)
T d1h2ba1 71 EVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDE 150 (171)
T ss_dssp EECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGG
T ss_pred cccCCCCcCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHHHHHHhH
Confidence 468898753 23489999999999999999999999989999999
Q ss_pred HHHHHHHHHHhcCCCCCCEEEE
Q psy1119 550 YATAVYAMFICGQMQKGESILI 571 (1392)
Q Consensus 550 ~~TA~~aL~~~a~l~~GetVLI 571 (1392)
++|||+++ ..+.+ .|++|||
T Consensus 151 ~~ta~~al-~~~~~-~G~~VlI 170 (171)
T d1h2ba1 151 INDVLERL-EKGEV-LGRAVLI 170 (171)
T ss_dssp HHHHHHHH-HTTCC-SSEEEEE
T ss_pred HHHHHHHH-HhcCC-CCCEEEe
Confidence 99999998 56788 8999998
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.69 E-value=1.8e-16 Score=176.70 Aligned_cols=178 Identities=16% Similarity=0.154 Sum_probs=145.6
Q ss_pred cCCCCeEEEEcCcc--hHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Q psy1119 778 ADSNKSYIICGGLG--GFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 778 ~~~~~~ylItGG~g--GiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
+..+|++|||||++ |||.++|+.|+++|++ |++++|+...... .+++......+....+|+++..++..+++.
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~-V~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQNDKLKGR----VEEFAAQLGSDIVLQCDVAEDASIDTMFAE 76 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCE-EEEEESSTTTHHH----HHHHHHHTTCCCEEECCTTCHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCCE-EEEEeCCHHHHHH----HHHHHhhcCCcceeecccchHHHHHHHHHH
Confidence 35789999999998 8999999999999998 8888888432221 222223333566788999999999999999
Q ss_pred H-hhcCCccEEEECcccCCCc-----cccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCCh
Q psy1119 856 A-NKLGPVDGIFNLAVVLKDA-----LFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQT 929 (1392)
Q Consensus 856 ~-~~~g~I~gvi~~Agv~~d~-----~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~ 929 (1392)
+ ..++++|++||||+..... .....+.+.|...+..++.+.+.+.++..+++.+.+.+|++||.++..+.++++
T Consensus 77 ~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~ 156 (258)
T d1qsga_ 77 LGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYN 156 (258)
T ss_dssp HHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTT
T ss_pred hhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcH
Confidence 8 6789999999999875433 346778888999999999999999998887766667899999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHcCCC----eEEEEcccc
Q psy1119 930 NYGMANSIMERICEARRAEGLP----GLAVEWGAV 960 (1392)
Q Consensus 930 ~Yaaana~ld~la~~r~~~Glp----~~ai~~g~~ 960 (1392)
.|+++|+++++|++..+.+..| +-+|..|.+
T Consensus 157 ~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i 191 (258)
T d1qsga_ 157 VMGLAKASLEANVRYMANAMGPEGVRVNAISAGPI 191 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCceeeccccccc
Confidence 9999999999999998887444 455555554
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.68 E-value=6.8e-17 Score=186.62 Aligned_cols=179 Identities=12% Similarity=0.124 Sum_probs=140.7
Q ss_pred CCCeEEEEc--CcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCc-----------eEEEE-------
Q psy1119 780 SNKSYIICG--GLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDV-----------QVLIS------- 839 (1392)
Q Consensus 780 ~~~~ylItG--G~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~-----------~v~~~------- 839 (1392)
.+|++|||| +++|||+++|+.|+++||+ |++..|+......... ...++.+. .....
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~-V~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVK-IIFGIWPPVYNIFMKN--YKNGKFDNDMIIDKDKKMNILDMLPFDASFD 77 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCE-EEEEECGGGHHHHHHH--HHTTTTTGGGEETTTEECCEEEEEECCTTCS
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcCCE-EEEEeCchhhhhhhHH--HHHHhhhhHHHHHHHhhhhhhhcccccceeh
Confidence 378999999 6689999999999999998 8888876432111111 11111111 11222
Q ss_pred -------------eccCCCHHHHHHHHHHH-hhcCCccEEEECcccCC--CccccCCCHHHHHHHHhhHhHHHHHHHHHH
Q psy1119 840 -------------TDDITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLK--DALFENQTPEDFNASLGPKANATKYFDKYS 903 (1392)
Q Consensus 840 -------------~~Dv~~~~~v~~l~~~~-~~~g~I~gvi~~Agv~~--d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~ 903 (1392)
.+|+++.++++++++.+ +++|+||++|||||... .+++.+++.++|+++++.++.+.+++.+++
T Consensus 78 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~ 157 (329)
T d1uh5a_ 78 TANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYF 157 (329)
T ss_dssp SGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred hhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHH
Confidence 24677888899999998 67999999999999754 357899999999999999999999999998
Q ss_pred hhhCCCCCeEEEecccccccCCCC-ChhHHHHHHHHHHHHHHHHHc-----CCCeEEEEccccC
Q psy1119 904 RTMCPTLGQFVVFSSVSCGRGNAG-QTNYGMANSIMERICEARRAE-----GLPGLAVEWGAVG 961 (1392)
Q Consensus 904 ~~~~~~l~~fV~~SS~s~~~G~~g-q~~Yaaana~ld~la~~r~~~-----Glp~~ai~~g~~~ 961 (1392)
.+++.+.+.||++||.++..+.|+ .+.|+++|+++++|++....+ |..+-+|..|++.
T Consensus 158 ~~~m~~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~ 221 (329)
T d1uh5a_ 158 VNIMKPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK 221 (329)
T ss_dssp GGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred HhhcccccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence 888877799999999999999888 678999999999999988754 6666777777653
|
| >d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=9.3e-17 Score=162.26 Aligned_cols=119 Identities=12% Similarity=0.081 Sum_probs=99.2
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
+...++|.+..+++.+.+.|. +++|||+|||+|+|||++|++.+.|.++.. ...|.++|+|++|+|
T Consensus 4 ~v~~~~~~~~~l~i~~v~~p~--------~~~geVlVkV~a~gin~~D~~~~~G~~~~~------~~~p~v~G~e~~G~V 69 (146)
T d1o89a1 4 LLLEQQDGKTLASVQTLDESR--------LPEGDVTVDVHWSSLNYKDALAITGKGKII------RNFPMIPGIDFAGTV 69 (146)
T ss_dssp EEEECC---CEEEEEECCGGG--------SCSCSEEEEEEEEECCHHHHHHHHTCSSCC------CSSSBCCCSEEEEEE
T ss_pred EEEEcCCCceEEEEEEcCCCC--------CCCCEEEEEEeeccCccceeeEEEeecccc------cccceeccccccccc
Confidence 345678888889999999886 789999999999999999999999987543 124779999999999
Q ss_pred ee-------CCCeEEEee------cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHH
Q psy1119 505 RD-------SGKRVMGLT------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAM 557 (1392)
Q Consensus 505 ~~-------vGdrV~gl~------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL 557 (1392)
.+ +||+|+... ..|+||||+.+|++.++++|+++|+++||++|+++.||+.++
T Consensus 70 ~~~~~~~~~~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~~ 135 (146)
T d1o89a1 70 RTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIIN 135 (146)
T ss_dssp EEECSTTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHHT
T ss_pred eeeccCCccceeeEEeecccceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 73 678887643 358999999999999999999999999999999999986654
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.65 E-value=1.4e-15 Score=167.45 Aligned_cols=164 Identities=21% Similarity=0.179 Sum_probs=133.1
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
||++|||||++|||+++|+.|+++||+ |++++|+.. +.+.....+|+++...+..+........
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~-V~i~~~~~~---------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 64 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYR-VVVLDLRRE---------------GEDLIYVEGDVTREEDVRRAVARAQEEA 64 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEESSCC---------------SSSSEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCcc---------------cccceEeeccccchhhhHHHHHhhhccc
Confidence 689999999999999999999999997 888898742 3345678899999999999988875545
Q ss_pred CccEEEECcccCCC----ccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--------CCCCeEEEecccccccCCCCC
Q psy1119 861 PVDGIFNLAVVLKD----ALFENQTPEDFNASLGPKANATKYFDKYSRTMC--------PTLGQFVVFSSVSCGRGNAGQ 928 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d----~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--------~~l~~fV~~SS~s~~~G~~gq 928 (1392)
..+.+++++++... ......+.+.|+++++.++.+.+++.+.+.+.+ ...+.||++||+++..|.+++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~ 144 (241)
T d1uaya_ 65 PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ 144 (241)
T ss_dssp CEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTC
T ss_pred cccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCc
Confidence 66667777765433 345678889999999999999999887664331 123799999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHcC----CCeEEEEcccc
Q psy1119 929 TNYGMANSIMERICEARRAEG----LPGLAVEWGAV 960 (1392)
Q Consensus 929 ~~Yaaana~ld~la~~r~~~G----lp~~ai~~g~~ 960 (1392)
+.|+++|+++.+|++..+.+. ..+-+|..|.+
T Consensus 145 ~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i 180 (241)
T d1uaya_ 145 AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLF 180 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcc
Confidence 999999999999999998774 44455555554
|
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=99.65 E-value=9e-17 Score=171.56 Aligned_cols=122 Identities=15% Similarity=0.104 Sum_probs=106.9
Q ss_pred ceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---------e
Q psy1119 436 LTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR---------D 506 (1392)
Q Consensus 436 l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~---------~ 506 (1392)
|++.+.+.|. |+++||+|||.|+|||++|++.+.|..+.. ..|.++|||++|+|. +
T Consensus 21 l~i~ev~~P~--------p~~~eVlIkv~a~giCgsD~~~~~g~~~~~-------~~p~i~GhE~~G~v~~vG~~v~~~~ 85 (199)
T d1cdoa1 21 LVIEEIEVDV--------PHANEIRIKIIATGVCHTDLYHLFEGKHKD-------GFPVVLGHEGAGIVESVGPGVTEFQ 85 (199)
T ss_dssp CEEEEEEECC--------CCTTEEEEEEEEEECCHHHHHHHHTTCCTT-------SCSEECCCCEEEEEEEECTTCCSCC
T ss_pred cEEEEEECCC--------CCCCEEEEEEEEEEEecchhhhhhhccccc-------ccccccccccceEEEEEcCCCceec
Confidence 7888888875 799999999999999999999999966543 247899999999987 4
Q ss_pred CCCeEEEee------------------------------------------------cCCcccceEEecccceEEcCCCC
Q psy1119 507 SGKRVMGLT------------------------------------------------SGRSLANCCETDVEMAWEIPDQW 538 (1392)
Q Consensus 507 vGdrV~gl~------------------------------------------------~~g~~a~~v~~~~~~~~~iPd~l 538 (1392)
+||||.... ..|+||||+.++++.++++|+++
T Consensus 86 ~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP~~~ 165 (199)
T d1cdoa1 86 PGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSV 165 (199)
T ss_dssp TTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTS
T ss_pred CCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECCCCC
Confidence 678885531 12889999999999999999999
Q ss_pred CHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEE
Q psy1119 539 TLEDAATVPCVYATAVYAMFICGQMQKGESILIH 572 (1392)
Q Consensus 539 s~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ 572 (1392)
++++||++++++.|+++++...++.+.|++|||.
T Consensus 166 ~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~ 199 (199)
T d1cdoa1 166 KLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL 199 (199)
T ss_dssp CCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 9999999999999999999999999999999984
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.65 E-value=1.3e-15 Score=171.11 Aligned_cols=180 Identities=14% Similarity=0.112 Sum_probs=140.2
Q ss_pred cCCCCeEEEEcCcc--hHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Q psy1119 778 ADSNKSYIICGGLG--GFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 778 ~~~~~~ylItGG~g--GiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
+.++|++|||||+| |||+++|+.|+++|++ |++++|+.. ..+.++++.+.+..+.+..+|+++.+++++++++
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~-V~i~~r~~~----~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~ 76 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGAT-LAFTYLNES----LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNS 76 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCE-EEEEESSTT----THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCE-EEEEeCCHH----HHHHHHHHHhhCCceeEeeecccchhhHHHHHHH
Confidence 35799999999876 9999999999999997 889999842 2223444555566778899999999999999999
Q ss_pred H-hhcCCccEEEECcccCCCc----cccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChh
Q psy1119 856 A-NKLGPVDGIFNLAVVLKDA----LFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTN 930 (1392)
Q Consensus 856 ~-~~~g~I~gvi~~Agv~~d~----~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~ 930 (1392)
+ +.+|+||++|||||..... .+.+...+.+...+.....+...+.+...+.......++++||.+...+.+++..
T Consensus 77 ~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~ 156 (274)
T d2pd4a1 77 VKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNV 156 (274)
T ss_dssp HHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHH
T ss_pred HHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchh
Confidence 8 6799999999999976443 3445566667777766666666666655544344466788888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHc----CCCeEEEEccccCc
Q psy1119 931 YGMANSIMERICEARRAE----GLPGLAVEWGAVGE 962 (1392)
Q Consensus 931 Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~~ 962 (1392)
|+++|+++.+|++....+ |..+-+|..|++..
T Consensus 157 y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T 192 (274)
T d2pd4a1 157 MGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRT 192 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCC
T ss_pred hhHHHHHHHHHHHhhHHHhcCcCceecccccCcccC
Confidence 999999999999987765 66677888877643
|
| >d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.65 E-value=2.7e-16 Score=164.48 Aligned_cols=130 Identities=15% Similarity=0.068 Sum_probs=106.4
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRL 504 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV 504 (1392)
+....+|.+ |++.+.|.|. ++++||+|||.|+|||++|++.+.|.++.. ...|.++|||++|+|
T Consensus 9 ~v~~~~g~p--l~l~evp~P~--------~~~~evlVkv~a~gic~~D~~~~~G~~~~~------~~~P~i~GhE~~G~V 72 (175)
T d1llua1 9 AVVHAYGAP--LRIEEVKVPL--------PGPGQVLVKIEASGVCHTDLHAAEGDWPVK------PPLPFIPGHEGVGYV 72 (175)
T ss_dssp EEBCSTTSC--CEEEEEECCC--------CCTTCEEEEEEEEECCHHHHHHHHTCSSSC------CCSSBCCCSCEEEEE
T ss_pred EEEEeCCCC--CEEEEeECCC--------CCCCEEEEEEEEecCcccchhhhccCcccc------ccCCcCCCCcceEEE
Confidence 344556653 7888888875 799999999999999999999999987643 224789999999999
Q ss_pred e---------eCCCeEEEe----------------------------ecCCcccceEEecccceEEcCCCCCHhhHhhhh
Q psy1119 505 R---------DSGKRVMGL----------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVP 547 (1392)
Q Consensus 505 ~---------~vGdrV~gl----------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp 547 (1392)
+ ++||||+.. ..+|+|+||+.++++.++++|++++++.||++.
T Consensus 73 ~~~G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~ 152 (175)
T d1llua1 73 AAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKL 152 (175)
T ss_dssp EEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECG
T ss_pred EEeCCCccccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCCCChhHHHHHH
Confidence 7 468888642 123689999999999999999999999999888
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEE
Q psy1119 548 CVYATAVYAMFICGQMQKGESILIH 572 (1392)
Q Consensus 548 ~~~~TA~~aL~~~a~l~~GetVLI~ 572 (1392)
+++.|+++++ +.+ ..+|++|||.
T Consensus 153 ~~~~t~~~~~-~~g-~~~G~~VLVl 175 (175)
T d1llua1 153 DDINQILDQM-RAG-QIEGRIVLEM 175 (175)
T ss_dssp GGHHHHHHHH-HTT-CCSSEEEEEC
T ss_pred hHHHHHHHHH-HhC-CCCCCEEEeC
Confidence 9999999887 444 4579999984
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.61 E-value=1.6e-14 Score=161.24 Aligned_cols=175 Identities=16% Similarity=0.120 Sum_probs=131.5
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHh-cCCceEEEEeccCC----CHHHHHHHHHHH-
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK-SYDVQVLISTDDIT----TEAGVVNLLTEA- 856 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~-~~G~~v~~~~~Dv~----~~~~v~~l~~~~- 856 (1392)
++|||||++|||+++|+.|+++|++ |++++|+... ..++..+++. ..+.++....+|+. ..+.++++++.+
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~-Vvi~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFR-VVVHYRHSEG--AAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 79 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHH--HHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCchH--HHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHH
Confidence 7999999999999999999999996 8888988432 2233333333 34566776666554 467777888877
Q ss_pred hhcCCccEEEECcccCCCccccC-----------CCHHHHHHHHhhHhHHHHHHHHHHhhhC-------CCCCeEEEecc
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFEN-----------QTPEDFNASLGPKANATKYFDKYSRTMC-------PTLGQFVVFSS 918 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~-----------~t~e~~~~~~~~kv~g~~~L~~~~~~~~-------~~l~~fV~~SS 918 (1392)
+++|+||++|||||+.....+.+ ...+.|...+..++.+.+...+.....+ .....++.+||
T Consensus 80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (266)
T d1mxha_ 80 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD 159 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred HHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhh
Confidence 67999999999999876655433 3455677777778777777666553332 12367899999
Q ss_pred cccccCCCCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 919 VSCGRGNAGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 919 ~s~~~G~~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
.++..+.++++.|+++|+++++|++..+.+ |..+.+|..|.+
T Consensus 160 ~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i 205 (266)
T d1mxha_ 160 AMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLS 205 (266)
T ss_dssp GGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred ccccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcE
Confidence 999999999999999999999999998876 455566666654
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.60 E-value=3.6e-15 Score=169.55 Aligned_cols=181 Identities=13% Similarity=0.103 Sum_probs=134.1
Q ss_pred CCCCeEEEEcCcc--hHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhc-------CC--ceE-EEEecc----
Q psy1119 779 DSNKSYIICGGLG--GFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKS-------YD--VQV-LISTDD---- 842 (1392)
Q Consensus 779 ~~~~~ylItGG~g--GiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~-------~G--~~v-~~~~~D---- 842 (1392)
..+|++|||||+| |||+++|+.|+++||+ |++++|+........ ..+..+. .+ ... ....+|
T Consensus 6 L~gK~alVTGass~~GIG~aiA~~la~~Ga~-Vvi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (297)
T d1d7oa_ 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAE-ILVGTWVPALNIFET-SLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD 83 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTCE-EEEEEEHHHHHHHHH-HHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCE-EEEEeCchhhhhhHH-HHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence 4789999999876 9999999999999998 788888632211111 1111000 01 111 122222
Q ss_pred ----------------CCCHHHHHHHHHHH-hhcCCccEEEECcccCC--CccccCCCHHHHHHHHhhHhHHHHHHHHHH
Q psy1119 843 ----------------ITTEAGVVNLLTEA-NKLGPVDGIFNLAVVLK--DALFENQTPEDFNASLGPKANATKYFDKYS 903 (1392)
Q Consensus 843 ----------------v~~~~~v~~l~~~~-~~~g~I~gvi~~Agv~~--d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~ 903 (1392)
.++...++++++++ +++|+||++|||||... ..++.+++.++|++.+++|+.+.+++.++.
T Consensus 84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~ 163 (297)
T d1d7oa_ 84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF 163 (297)
T ss_dssp SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence 34556678899988 67999999999999854 568999999999999999999999999988
Q ss_pred hhhCCCCCeEEEeccccccc-CCCCChhHHHHHHHHHHHHHHHHHc-----CCCeEEEEccccC
Q psy1119 904 RTMCPTLGQFVVFSSVSCGR-GNAGQTNYGMANSIMERICEARRAE-----GLPGLAVEWGAVG 961 (1392)
Q Consensus 904 ~~~~~~l~~fV~~SS~s~~~-G~~gq~~Yaaana~ld~la~~r~~~-----Glp~~ai~~g~~~ 961 (1392)
.+++...+..+.++|.++.. ..+++..|+++|+++.++++....+ |..+-+|..|.+.
T Consensus 164 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~ 227 (297)
T d1d7oa_ 164 LPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLG 227 (297)
T ss_dssp GGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCB
T ss_pred HHHhhcCCcceeeeehhhcccccccccceecccccccccccccchhccccceEEeccccccccc
Confidence 77665667777777777664 4588889999999999998865443 6667788777764
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.60 E-value=8.1e-15 Score=163.98 Aligned_cols=176 Identities=16% Similarity=0.143 Sum_probs=140.0
Q ss_pred cCCCCeEEEEc--CcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Q psy1119 778 ADSNKSYIICG--GLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 778 ~~~~~~ylItG--G~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
+..+|++|||| |+.|||+++|+.|+++||+ |++++|+..+ ..+ +..+..|.++..+.||+++++++.++++.
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~-Vil~~~~~~~--~~~---~~~~~~~~~~~~~~~dv~~~~~~~~~~~~ 76 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQ-LVLTGFDRLR--LIQ---RITDRLPAKAPLLELDVQNEEHLASLAGR 76 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCE-EEEEECSCHH--HHH---HHHTTSSSCCCEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCE-EEEEeCChHH--HHH---HHHHHcCCceeeEeeecccccccccccch
Confidence 45789999999 5578999999999999997 8888887421 111 22245677888899999999999999888
Q ss_pred H-h---hcCCccEEEECcccC-----CCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC
Q psy1119 856 A-N---KLGPVDGIFNLAVVL-----KDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA 926 (1392)
Q Consensus 856 ~-~---~~g~I~gvi~~Agv~-----~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~ 926 (1392)
+ + .+++||+++||||.. ....+.+.+.++|...+..++.+.+.+.+....+.. ...+++++|.+...+.+
T Consensus 77 v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~~~~~~~p 155 (268)
T d2h7ma1 77 VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN-PGGSIVGMDFDPSRAMP 155 (268)
T ss_dssp HHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE-EEEEEEEEECCCSSCCT
T ss_pred hhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc-cccccccccccccccCc
Confidence 7 2 357899999999964 334678899999999999999999888877755432 24466677788888999
Q ss_pred CChhHHHHHHHHHHHHHHHHHc----CCCeEEEEcccc
Q psy1119 927 GQTNYGMANSIMERICEARRAE----GLPGLAVEWGAV 960 (1392)
Q Consensus 927 gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~ 960 (1392)
+...|+++|+++.+|+++.+.+ |..+-+|..|.+
T Consensus 156 ~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v 193 (268)
T d2h7ma1 156 AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPI 193 (268)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC
T ss_pred ccchhhccccchhhccccchhhhhccCCcceEEecCCC
Confidence 9999999999999999998887 444556666554
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.60 E-value=5.1e-18 Score=177.89 Aligned_cols=150 Identities=11% Similarity=-0.053 Sum_probs=115.0
Q ss_pred EeeccCCCCC-Cc--eEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhh---hhhhccccccccce
Q psy1119 425 INALVRGDMS-SL--TWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEV---IESRRLYQHCVIGF 498 (1392)
Q Consensus 425 l~~~~~G~l~-~l--~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~---~~~~~~~~p~~lG~ 498 (1392)
+....+|.+. .| +..+.|.|. ++++||+|||+|+|||++|++++.|..+... ........|.++|+
T Consensus 7 ~v~~~~G~p~~~l~l~~~~~p~p~--------~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~ 78 (175)
T d1gu7a1 7 VLYTQHGEPKDVLFTQSFEIDDDN--------LAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGN 78 (175)
T ss_dssp EEESSCSCHHHHCEEEEEEECTTS--------CCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCS
T ss_pred EEEccCCCcccccEEEEEECCCCC--------CCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccccc
Confidence 3445677763 34 445666554 7899999999999999999999999865431 11112345778999
Q ss_pred eeEEEEe---------eCCCeEEEee-cCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHH-hcCCCCCC
Q psy1119 499 EYSGRLR---------DSGKRVMGLT-SGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFI-CGQMQKGE 567 (1392)
Q Consensus 499 E~sGvV~---------~vGdrV~gl~-~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~-~a~l~~Ge 567 (1392)
|++|+|. ..|++|.... ..|+|+||+.+|++.++++|++++.+.| +++..+|||+++.. .+++++|+
T Consensus 79 e~~g~V~~~~~~~~~~~~g~~v~~~~~~~g~~aey~~v~~~~~~~iP~~~~~~~a--~~~~~~ta~~~l~~~~~~~~~g~ 156 (175)
T d1gu7a1 79 EGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKAN--GKPNGLTDAKSIETLYDGTKPLH 156 (175)
T ss_dssp CCEEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHT--TCSCCCCCCCCEEEECCSSSCHH
T ss_pred ccccccccccccccccccccceeccccccccccceeeehhhhccCCCccchhhhh--ccchHHHHHHHHHHHhcCCCCCC
Confidence 9999987 4678887643 3589999999999999999998754444 45678899998764 46899999
Q ss_pred EEEEEc-CCchHHHHHHH
Q psy1119 568 SILIHA-GSGGVGQAAIN 584 (1392)
Q Consensus 568 tVLI~g-a~GgVG~aaIq 584 (1392)
+|||+| |+||||+++||
T Consensus 157 ~vli~gaa~~gvG~~~iQ 174 (175)
T d1gu7a1 157 ELYQDGVANSKDGKQLIT 174 (175)
T ss_dssp HHHHHHHHTGGGSCEEEE
T ss_pred EEEEECccchhhhheEEe
Confidence 999998 56889999887
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=99.60 E-value=2.4e-15 Score=159.39 Aligned_cols=121 Identities=12% Similarity=0.177 Sum_probs=100.7
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR--------- 505 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~--------- 505 (1392)
.|++.+.|.|. |+++||+|||.|+|||++|++++.|.++.. .|.++|||++|+|+
T Consensus 15 ~l~l~~v~~P~--------p~~geVlVkv~a~gic~sD~~~~~G~~~~~--------~P~i~GHE~~G~V~~vG~~v~~~ 78 (194)
T d1f8fa1 15 DFELQALKIRQ--------PQGDEVLVKVVATGMCHTDLIVRDQKYPVP--------LPAVLGHEGSGIIEAIGPNVTEL 78 (194)
T ss_dssp CCEEEEEEECC--------CCTTEEEEEEEEEECCHHHHHHHTTSSCCC--------SSBCCCCEEEEEEEEECTTCCSC
T ss_pred CcEEEEeeCCC--------CCCCEEEEEEEEEEecCchHhhhhhccccc--------CCcccccceEEEeeecCccceeE
Confidence 47888888876 799999999999999999999999987643 48899999999997
Q ss_pred eCCCeEEEee-------------------------------------------------cCCcccceEEecccceEEcCC
Q psy1119 506 DSGKRVMGLT-------------------------------------------------SGRSLANCCETDVEMAWEIPD 536 (1392)
Q Consensus 506 ~vGdrV~gl~-------------------------------------------------~~g~~a~~v~~~~~~~~~iPd 536 (1392)
++||||+... ..|+|+||+.+++..++++|+
T Consensus 79 ~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~ 158 (194)
T d1f8fa1 79 QVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTK 158 (194)
T ss_dssp CTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECT
T ss_pred ccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECCC
Confidence 4789985421 016789999999999999999
Q ss_pred CCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q psy1119 537 QWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTV 597 (1392)
Q Consensus 537 ~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv 597 (1392)
++++++++ +| +|+|++|++|+|+|+.+|+..++++
T Consensus 159 ~i~~~~~~-------------------------~i-~g~g~~g~~aiq~a~~~g~~~iiaV 193 (194)
T d1f8fa1 159 DFPFDQLV-------------------------KF-YAFDEINQAAIDSRKGITLKPIIKI 193 (194)
T ss_dssp TCCGGGGE-------------------------EE-EEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred CCCcccEE-------------------------EE-eCcHHHHHHHHHHHHHcCCCEEEEe
Confidence 99887653 33 4779999999999999999866554
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.59 E-value=7e-16 Score=164.02 Aligned_cols=128 Identities=11% Similarity=0.051 Sum_probs=107.4
Q ss_pred ccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--
Q psy1119 428 LVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-- 505 (1392)
Q Consensus 428 ~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-- 505 (1392)
..+|.+ |++.+.|.|+ |+++||+|||.++|||++|++++.|.++.. ..|+++|||++|+|.
T Consensus 13 ~~~g~~--l~i~evp~P~--------p~~~eVLVkv~a~gic~sD~~~~~G~~~~~-------~~p~v~GhE~~G~V~~v 75 (197)
T d2fzwa1 13 WEAGKP--LSIEEIEVAP--------PKAHEVRIKIIATAVCHTDAYTLSGADPEG-------CFPVILGHLGAGIVESV 75 (197)
T ss_dssp CSTTSC--CEEEEEEECC--------CCTTEEEEEEEEEECCHHHHHHHHTCCTTC-------CSSBCCCCEEEEEEEEE
T ss_pred ccCCCC--CEEEEEECCC--------CCCCEEEEEEEEecCCCCcHHHHcCCcccc-------cccccCCcceeeEEEee
Confidence 345543 7888888886 799999999999999999999999976443 248899999999997
Q ss_pred -------eCCCeEEEee------------------------------------------------cCCcccceEEecccc
Q psy1119 506 -------DSGKRVMGLT------------------------------------------------SGRSLANCCETDVEM 530 (1392)
Q Consensus 506 -------~vGdrV~gl~------------------------------------------------~~g~~a~~v~~~~~~ 530 (1392)
++||||.... ..|+||||+++++..
T Consensus 76 G~~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~ 155 (197)
T d2fzwa1 76 GEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADIS 155 (197)
T ss_dssp CTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred cCCceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHH
Confidence 4688886421 027899999999999
Q ss_pred eEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEE
Q psy1119 531 AWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIH 572 (1392)
Q Consensus 531 ~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ 572 (1392)
++++|+++++++||++++++.|++.++.....-+.+++|||.
T Consensus 156 ~~~vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi 197 (197)
T d2fzwa1 156 VAKIDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 197 (197)
T ss_dssp EEECCTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred EEECCCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence 999999999999999999999999998766666789999984
|
| >d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.59 E-value=1.8e-15 Score=157.54 Aligned_cols=127 Identities=16% Similarity=0.161 Sum_probs=98.8
Q ss_pred eccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee
Q psy1119 427 ALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD 506 (1392)
Q Consensus 427 ~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~ 506 (1392)
...+|. .|++.+.|.|. +++|||+|||.|+|||++|++.+.+..... ...|.++|||++|+|++
T Consensus 6 ~~~~g~--pl~i~~v~~P~--------~~~~eVlVkv~a~gic~sD~~~~~~~~~~~------~~~p~v~GhE~~G~Vv~ 69 (171)
T d1rjwa1 6 VEQFKE--PLKIKEVEKPT--------ISYGEVLVRIKACGVCHTDLHAAHGDWPVK------PKLPLIPGHEGVGIVEE 69 (171)
T ss_dssp BSSTTS--CCEEEECCCCC--------CCTTEEEEEEEEEEECHHHHHHHHTCSSSC------CCSSBCCCSCEEEEEEE
T ss_pred EecCCC--CcEEEEeECCC--------CCCCeEEEEEEEeeccccceeeeecccccc------cccccccCCEEEEEEEE
Confidence 344553 38889998886 799999999999999999999887754322 22478999999999984
Q ss_pred ---------CCCeEEEe----------------------------ecCCcccceEEecccceEEcCCCCCHhhHhhhhHH
Q psy1119 507 ---------SGKRVMGL----------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCV 549 (1392)
Q Consensus 507 ---------vGdrV~gl----------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~ 549 (1392)
+||||+.- ..+|+||||+.+++++++++|++++++.|+. . +
T Consensus 70 vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~l-~-~ 147 (171)
T d1rjwa1 70 VGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPL-E-K 147 (171)
T ss_dssp ECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEEEEG-G-G
T ss_pred ecccccCceeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHHHHH-H-H
Confidence 57888531 1237899999999999999999999976654 3 3
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEEc
Q psy1119 550 YATAVYAMFICGQMQKGESILIHA 573 (1392)
Q Consensus 550 ~~TA~~aL~~~a~l~~GetVLI~g 573 (1392)
..++++++ ..+.+ +|++|||.|
T Consensus 148 ~~~~~~~~-~~~~~-~G~tVlViG 169 (171)
T d1rjwa1 148 INEVFDRM-LKGQI-NGRVVLTLE 169 (171)
T ss_dssp HHHHHHHH-HTTCC-SSEEEEECC
T ss_pred HHHHHHHH-HhcCC-CCCEEEEeC
Confidence 55777776 35666 599999985
|
| >d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=1.1e-15 Score=161.05 Aligned_cols=124 Identities=18% Similarity=0.176 Sum_probs=99.6
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-------- 505 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-------- 505 (1392)
..|++.+.|.|. ++++||+|||.|+|||++|++.+.|..... .....|.++|||++|+|+
T Consensus 17 ~~l~l~evp~P~--------p~~~eVlVkv~a~gic~sD~~~~~~~~~~~----~~~~~p~i~GhE~~G~V~~vG~~v~~ 84 (185)
T d1pl8a1 17 GDLRLENYPIPE--------PGPNEVLLRMHSVGICGSDVHYWEYGRIGN----FIVKKPMVLGHEASGTVEKVGSSVKH 84 (185)
T ss_dssp TEEEEEECCCCC--------CCTTEEEEEEEEEEECHHHHHHHHHSEETT----EECSSCEECCCEEEEEEEEECTTCCS
T ss_pred CeEEEEEeECCC--------CCCCEEEEEEEEEEeeCchhhhhccccccc----cCCCCCeeeeeeeeeeEEEeccceee
Confidence 458899999986 799999999999999999999987643211 112347899999999997
Q ss_pred -eCCCeEEEe----------------------------ecCCcccceEEecccceEEcCCCCCHhhHhhhhHHHHHHHHH
Q psy1119 506 -DSGKRVMGL----------------------------TSGRSLANCCETDVEMAWEIPDQWTLEDAATVPCVYATAVYA 556 (1392)
Q Consensus 506 -~vGdrV~gl----------------------------~~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~a 556 (1392)
++||||+.. ..+|+|+||+.+++++++++|+++++++|+++|+ ++|+++
T Consensus 85 ~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~pl--~~a~~a 162 (185)
T d1pl8a1 85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPL--EKALEA 162 (185)
T ss_dssp CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEEG--GGHHHH
T ss_pred ecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHHHH--HHHHHH
Confidence 478998642 1247899999999999999999999999988763 466666
Q ss_pred HHHhcCCCCCCEEEEE
Q psy1119 557 MFICGQMQKGESILIH 572 (1392)
Q Consensus 557 L~~~a~l~~GetVLI~ 572 (1392)
+ ...++++|++|||.
T Consensus 163 ~-~~~~~~~G~~VlIg 177 (185)
T d1pl8a1 163 F-ETFKKGLGLKIMLK 177 (185)
T ss_dssp H-HHHHTTCCSEEEEE
T ss_pred H-HHhCCCCCCEEEEE
Confidence 6 45678999999994
|
| >d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=99.56 E-value=2e-15 Score=161.48 Aligned_cols=126 Identities=20% Similarity=0.170 Sum_probs=105.1
Q ss_pred eeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
....+|.+ |++.+.|.|. |+++||+|||.|+|||++|++.+.|..+.. .|.++|||++|+|.
T Consensus 13 V~~~~g~p--l~i~evp~P~--------p~~geVlVkv~a~gic~sD~~~~~G~~~~~--------~P~v~GHE~~G~V~ 74 (202)
T d1e3ia1 13 IAWKTGSP--LCIEEIEVSP--------PKACEVRIQVIATCVCPTDINATDPKKKAL--------FPVVLGHECAGIVE 74 (202)
T ss_dssp EBCSTTSC--CEEEEEEECC--------CCTTEEEEEEEEEECCHHHHHTTCTTSCCC--------SSBCCCCEEEEEEE
T ss_pred EEccCCCC--CEEEEEECCC--------CCCCEEEEEEEEEEEeccccceeeeecccc--------cccccccccceEEe
Confidence 33445543 7888888876 799999999999999999999999977543 37899999999997
Q ss_pred ---------eCCCeEEEee----------------------------------------------------cCCcccceE
Q psy1119 506 ---------DSGKRVMGLT----------------------------------------------------SGRSLANCC 524 (1392)
Q Consensus 506 ---------~vGdrV~gl~----------------------------------------------------~~g~~a~~v 524 (1392)
++||||+... ..|+|+||+
T Consensus 75 ~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~ 154 (202)
T d1e3ia1 75 SVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYT 154 (202)
T ss_dssp EECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEE
T ss_pred eecCCceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEE
Confidence 4788986531 027899999
Q ss_pred EecccceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEE
Q psy1119 525 ETDVEMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIH 572 (1392)
Q Consensus 525 ~~~~~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ 572 (1392)
++++..++++|++++++.++++.+++.+++.++.. +++|++|.|.
T Consensus 155 ~v~~~~l~~lP~~~~~~~~~~~~~~~~~~~~a~~~---~k~G~~V~vi 199 (202)
T d1e3ia1 155 VVSEANLARVDDEFDLDLLVTHALPFESINDAIDL---MKEGKSIRTI 199 (202)
T ss_dssp EEEGGGEEECCTTSCGGGGEEEEEEGGGHHHHHHH---HHTTCCSEEE
T ss_pred EEehhhEEECCCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCEEEEE
Confidence 99999999999999999999999999999988843 4689999875
|
| >d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.53 E-value=1.3e-14 Score=151.92 Aligned_cols=135 Identities=11% Similarity=0.081 Sum_probs=100.2
Q ss_pred EeeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhh-hhccccccccceeeEEE
Q psy1119 425 INALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIE-SRRLYQHCVIGFEYSGR 503 (1392)
Q Consensus 425 l~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~-~~~~~~p~~lG~E~sGv 503 (1392)
+....+|.+ |++.+.|.|. ++++||+|||+|+|||+.|++++.|.++..... ......|.++|||++|+
T Consensus 4 ~~~~~~G~p--l~i~dv~~P~--------p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~ 73 (177)
T d1jvba1 4 VRLVEIGKP--LSLQEIGVPK--------PKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGK 73 (177)
T ss_dssp EEECSTTSC--CEEEECCCCC--------CCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEE
T ss_pred EEEEeCCCC--CEEEEeeCCC--------CCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEE
Confidence 344567755 8899999886 789999999999999999999999976533111 11234588999999999
Q ss_pred Ee---------eCCCeEEEee---------------------------cCCcccceEEeccc-ceEEcCCCCCHhhHhhh
Q psy1119 504 LR---------DSGKRVMGLT---------------------------SGRSLANCCETDVE-MAWEIPDQWTLEDAATV 546 (1392)
Q Consensus 504 V~---------~vGdrV~gl~---------------------------~~g~~a~~v~~~~~-~~~~iPd~ls~e~AA~l 546 (1392)
|. ++||||+... .+|+||||+.++.. .++++|+..+.+.|+..
T Consensus 74 V~~~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~ 153 (177)
T d1jvba1 74 IEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMK 153 (177)
T ss_dssp EEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCCCCEEEEE
T ss_pred EeeeccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCChHHHHHHH
Confidence 96 4789996531 23899999999765 46666665554444443
Q ss_pred hHHHHHHHHHHHHhcCCCCCCEEEE
Q psy1119 547 PCVYATAVYAMFICGQMQKGESILI 571 (1392)
Q Consensus 547 p~~~~TA~~aL~~~a~l~~GetVLI 571 (1392)
..++++|++++ ..+++ .|++|||
T Consensus 154 ~~~~~~a~~~~-~~~~~-~G~~VlI 176 (177)
T d1jvba1 154 LEEANEAIDNL-ENFKA-IGRQVLI 176 (177)
T ss_dssp GGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred HHHHHHHHHHH-Hhhcc-cCCceEC
Confidence 46888999998 56666 6999998
|
| >d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=99.53 E-value=5e-15 Score=155.10 Aligned_cols=123 Identities=10% Similarity=0.031 Sum_probs=98.1
Q ss_pred eeccCCCCCCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe
Q psy1119 426 NALVRGDMSSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR 505 (1392)
Q Consensus 426 ~~~~~G~l~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~ 505 (1392)
....+|.+ |++.+.|.|. ++++||+|||.|+|||++|++++.|..+.. ..|.++|||++|+|+
T Consensus 9 v~~~~~~p--l~i~ev~~P~--------~~~~evlVkv~a~gIC~sD~~~~~G~~~~~-------~~P~vlGHE~~G~V~ 71 (184)
T d1vj0a1 9 VLEKFNQP--LVYKEFEISD--------IPRGSILVEILSAGVCGSDVHMFRGEDPRV-------PLPIILGHEGAGRVV 71 (184)
T ss_dssp EBCSTTSC--CEEEEEEECC--------CCTTCEEEEEEEEEECHHHHHHHTTCCTTC-------CSSBCCCCEEEEEEE
T ss_pred EEecCCCC--cEEEEeeCCC--------CCCCEEEEEEEEECCCCCchhheeccCCcc-------ccccccceeeeeeee
Confidence 34445543 8888888876 789999999999999999999999987543 248899999999987
Q ss_pred e--------------CCCeEEEee------------------------------------cCCcccceEEec-ccceEEc
Q psy1119 506 D--------------SGKRVMGLT------------------------------------SGRSLANCCETD-VEMAWEI 534 (1392)
Q Consensus 506 ~--------------vGdrV~gl~------------------------------------~~g~~a~~v~~~-~~~~~~i 534 (1392)
+ +||+|.... ..|+||||+.++ +..++++
T Consensus 72 ~vG~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~i 151 (184)
T d1vj0a1 72 EVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKV 151 (184)
T ss_dssp EESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEE
T ss_pred EEeccccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEEC
Confidence 3 588886310 147999999995 5799999
Q ss_pred CCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEE
Q psy1119 535 PDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIH 572 (1392)
Q Consensus 535 Pd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ 572 (1392)
|++++++++ +++|++++ .++++++|++|||+
T Consensus 152 p~~l~~~~p------l~~A~~a~-~~~~~~~G~~VlI~ 182 (184)
T d1vj0a1 152 SEKITHRLP------LKEANKAL-ELMESREALKVILY 182 (184)
T ss_dssp CTTCCEEEE------GGGHHHHH-HHHHHTSCSCEEEE
T ss_pred CCCCCHHHH------HHHHHHHH-HHhCCCcCCEEEEe
Confidence 999997642 34677777 56789999999998
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.49 E-value=1.3e-16 Score=169.98 Aligned_cols=142 Identities=14% Similarity=0.072 Sum_probs=109.1
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR--------- 505 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~--------- 505 (1392)
.|++.+.|.|... ..-+.++++||+|||.|+|||.+|++++.|..+.. .|.++|||++|+|+
T Consensus 12 ~le~~e~~~P~~~-~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~~~--------~P~v~GHE~~G~Vv~vG~~V~~~ 82 (201)
T d1kola1 12 KVEVQKIDYPKMQ-DPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQ--------VGLVLGHEITGEVIEKGRDVENL 82 (201)
T ss_dssp EEEEEEECCCCSB-CTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCCC--------TTCBCCCCEEEEEEEECTTCCSC
T ss_pred ceEEEEecCCccc-CCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcccc--------cceeccceeeeeeeccccccccc
Confidence 5788888776421 00001467999999999999999999999987542 37899999999997
Q ss_pred eCCCeEEEe-------------------------------------ecCCcccceEEecc--cceEEcCCCCCHhhHhhh
Q psy1119 506 DSGKRVMGL-------------------------------------TSGRSLANCCETDV--EMAWEIPDQWTLEDAATV 546 (1392)
Q Consensus 506 ~vGdrV~gl-------------------------------------~~~g~~a~~v~~~~--~~~~~iPd~ls~e~AA~l 546 (1392)
++||||... ..+|+|+||+++|. ..+++|||+.+..+++++
T Consensus 83 ~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~~~~~~~ 162 (201)
T d1kola1 83 QIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINI 162 (201)
T ss_dssp CTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHHHTCCH
T ss_pred cccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCChHHHHHH
Confidence 578898521 11378999999985 369999998888888888
Q ss_pred hHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC
Q psy1119 547 PCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA 591 (1392)
Q Consensus 547 p~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga 591 (1392)
..+++|+++++. .++.+.|+ . |+|++|+.+||+||++||
T Consensus 163 ~~~~~~~~~a~~-~~~~~~g~----~-g~G~vG~~~i~~ak~~GA 201 (201)
T d1kola1 163 AEVVGVQVISLD-DAPRGYGE----F-DAGVPKKFVIDPHKTFSA 201 (201)
T ss_dssp HHHHTEEEECGG-GHHHHHHH----H-HHTCSCEEEECTTCSSCC
T ss_pred HHHHHHHHHHHH-hCCCCCeE----E-eeCHHHHHHHHHHHHcCC
Confidence 888888888763 34444453 3 679999999999999987
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.44 E-value=9.2e-14 Score=122.37 Aligned_cols=71 Identities=20% Similarity=0.352 Sum_probs=66.0
Q ss_pred CCHhhHhhhhHHHHHHHHHHH---HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q psy1119 538 WTLEDAATVPCVYATAVYAMF---ICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRK 608 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~---~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~ 608 (1392)
+|++||+++++++.|||.+++ .....++|++||||||+||||.+++|+|+.+|++|++|+++++|.+++++
T Consensus 1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~ 74 (77)
T d1o8ca2 1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS 74 (77)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHH
Confidence 689999999999999987765 45677899999999999999999999999999999999999999999987
|
| >d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=99.36 E-value=1.7e-13 Score=145.79 Aligned_cols=119 Identities=16% Similarity=0.167 Sum_probs=95.7
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR--------- 505 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~--------- 505 (1392)
.|++.+.|.|. |+++||+|||.++|||.+|++.+.|.++.. .|.++|||++|+|.
T Consensus 20 ~l~i~ev~~P~--------p~~~eVlVkV~a~giC~sDl~~~~G~~~~~--------~P~i~GHE~~G~Vv~vG~~v~~~ 83 (198)
T d2jhfa1 20 PFSIEEVEVAP--------PKAHEVRIKMVATGICRSDDHVVSGTLVTP--------LPVIAGHEAAGIVESIGEGVTTV 83 (198)
T ss_dssp CCEEEEEEECC--------CCTTEEEEEEEEEECCHHHHHHHHTSSCCC--------SSBCCCCSEEEEEEEECTTCCSC
T ss_pred CCEEEEEECCC--------CCCCEEEEEEEEEecccccceeecCCcccc--------cceecccceeEEEEecCccccCc
Confidence 48888888886 799999999999999999999999987643 47899999999997
Q ss_pred eCCCeEEEee------------------------------------------------cCCcccceEEecccceEEcCCC
Q psy1119 506 DSGKRVMGLT------------------------------------------------SGRSLANCCETDVEMAWEIPDQ 537 (1392)
Q Consensus 506 ~vGdrV~gl~------------------------------------------------~~g~~a~~v~~~~~~~~~iPd~ 537 (1392)
++||||.... ..|+|+||+++++..++++|+.
T Consensus 84 ~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p~~ 163 (198)
T d2jhfa1 84 RPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAA 163 (198)
T ss_dssp CTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTT
T ss_pred CCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEECCCC
Confidence 4688885411 0178999999999999999999
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEE
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIH 572 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ 572 (1392)
++++.+++..+++.+...+. ..+++|++|.|.
T Consensus 164 ~~~e~l~~~~~~~~~v~~g~---~~l~~G~~VaVi 195 (198)
T d2jhfa1 164 FALDPLITHVLPFEKINEGF---DLLRSGESIRTI 195 (198)
T ss_dssp SCCGGGEEEEEEGGGHHHHH---HHHHTTCCSEEE
T ss_pred CCHHHHHHHHHHHHhhhhCC---ceeeCCCEEEEE
Confidence 99988776655555444332 236789999886
|
| >d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.30 E-value=2.4e-12 Score=134.01 Aligned_cols=112 Identities=17% Similarity=0.051 Sum_probs=85.7
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe--------
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-------- 505 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-------- 505 (1392)
+.|++.+.|.|+ |+++||+|||.|+|||.+|++.+.|..+.. ..|.++|||++|+|+
T Consensus 11 ~pl~i~ev~~P~--------pg~geVlVkv~a~gic~sDl~~~~g~~~~~-------~~P~i~GhE~~G~V~~vG~~V~~ 75 (179)
T d1uufa1 11 QPLEPMDITRRE--------PGPNDVKIEIAYCGVCHSDLHQVRSEWAGT-------VYPCVPGHEIVGRVVAVGDQVEK 75 (179)
T ss_dssp SCCEEEECCCCC--------CCTTEEEEEEEEEECCHHHHHHHHCTTSCC-------CSSBCCCCCEEEEEEEECTTCCS
T ss_pred CCCEEEEecCCC--------CCCCEEEEEEEEECCCCCcceeeeeeeccc-------cccccccccccccchhhcccccc
Confidence 458999999987 799999999999999999999999976543 237899999999997
Q ss_pred -eCCCeEEEee------------------------------------cCCcccceEEecccceEEcCCCCCHhhHhhhhH
Q psy1119 506 -DSGKRVMGLT------------------------------------SGRSLANCCETDVEMAWEIPDQWTLEDAATVPC 548 (1392)
Q Consensus 506 -~vGdrV~gl~------------------------------------~~g~~a~~v~~~~~~~~~iPd~ls~e~AA~lp~ 548 (1392)
++||||.... ..|+|+||+.+++++++++|+......+| .
T Consensus 76 ~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~~~a---~ 152 (179)
T d1uufa1 76 YAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRA---D 152 (179)
T ss_dssp CCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEEECG---G
T ss_pred CCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcChhHh---c
Confidence 4788984210 12789999999999999999664332222 2
Q ss_pred HHHHHHHHHHHhcCCC
Q psy1119 549 VYATAVYAMFICGQMQ 564 (1392)
Q Consensus 549 ~~~TA~~aL~~~a~l~ 564 (1392)
++.++++++ .++.++
T Consensus 153 ~l~~a~~a~-~~a~v~ 167 (179)
T d1uufa1 153 QINEAYERM-LRGDVK 167 (179)
T ss_dssp GHHHHHHHH-HTTCSS
T ss_pred hhHHHHHHH-HHhCcc
Confidence 456777776 445553
|
| >d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=99.25 E-value=8.8e-13 Score=139.85 Aligned_cols=120 Identities=14% Similarity=0.111 Sum_probs=93.8
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEee--------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLRD-------- 506 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~~-------- 506 (1392)
.|++.+.|.|. |+++||+|||.|+|||.+|++++.|.++.. .|.++|||++|+|++
T Consensus 20 ~l~i~ev~~P~--------p~~~eVlVkv~a~gICgsDlh~~~G~~~~~--------~P~i~GHE~~G~Vv~~G~~v~~~ 83 (198)
T d1p0fa1 20 PLSLETITVAP--------PKAHEVRIKILASGICGSDSSVLKEIIPSK--------FPVILGHEAVGVVESIGAGVTCV 83 (198)
T ss_dssp CCEEEEEEECC--------CCTTEEEEEEEEEECCHHHHHHHTTSSCCC--------SSBCCCCCEEEEEEEECTTCCSC
T ss_pred CCEEEEEECCC--------CCCCEEEEEEEEEEEecccceeeeeccccc--------cccccceeeeeeeeecCcccccC
Confidence 48888888876 689999999999999999999999987543 488999999999974
Q ss_pred -CCCeEEEee------------------------------------------------cCCcccceEEecccceEEcCCC
Q psy1119 507 -SGKRVMGLT------------------------------------------------SGRSLANCCETDVEMAWEIPDQ 537 (1392)
Q Consensus 507 -vGdrV~gl~------------------------------------------------~~g~~a~~v~~~~~~~~~iPd~ 537 (1392)
+||||.... ..++|+||+.+++..++++|++
T Consensus 84 ~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~~ 163 (198)
T d1p0fa1 84 KPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPK 163 (198)
T ss_dssp CTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTT
T ss_pred cCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCCC
Confidence 688886411 0267899999999999999999
Q ss_pred CCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHH
Q psy1119 538 WTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQA 581 (1392)
Q Consensus 538 ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~a 581 (1392)
++++.++...+.+.+ +.++++|||.| +|++|++
T Consensus 164 ~~~~~~~~~~~~~~~----------v~~~~~vlv~G-~G~iGl~ 196 (198)
T d1p0fa1 164 INVNFLVSTKLTLDQ----------INKAFELLSSG-QGVRSIM 196 (198)
T ss_dssp SCGGGGEEEEECGGG----------HHHHHHHTTTS-SCSEEEE
T ss_pred CCHHHHHHhhcchhh----------cCCCCEEEEEC-CCcceEE
Confidence 998877655544333 33445677774 5887753
|
| >d2pnga1 a.28.1.1 (A:1-76) Type I fatty acid synthase ACP domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Type I fatty acid synthase ACP domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.25 E-value=1.4e-12 Score=115.48 Aligned_cols=71 Identities=45% Similarity=0.768 Sum_probs=65.5
Q ss_pred CCcchHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhhccCCHHHHHHHHh
Q psy1119 1017 GGATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDIRGLTFAKLQDIAV 1087 (1392)
Q Consensus 1017 ~~~~~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i~~~ti~~La~~~~ 1087 (1392)
...+.|.+.|+++||++++++|+++++|++||+|||+|++|++||+++||+++|+.+|.++|+++|+++++
T Consensus 4 ~~e~~l~~~va~~Lgi~~~~~I~~~~~f~~lG~DSl~a~el~~~i~~~~g~~l~~~~l~~~Ti~~L~el~a 74 (76)
T d2pnga1 4 EAQRDLVKAVAHILGIRDLAGINLDSSLADLGLDSLMGVEVRQILEREHDLVLPIREVRQLTLRKLQEMSS 74 (76)
T ss_dssp SCCCCGGGTHHHHHTCSSCTTSCSSSCHHHHTCSSHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHTSC
T ss_pred HHHHHHHHHHHHHhccCCHhhCCCCCCHHHhCCcHHHHHHHHHHHHHHhCCCCCHHHHHHhhHHHHHHHHh
Confidence 34567899999999997789999999999999999999999999999999999999998899999998754
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.25 E-value=3.6e-11 Score=132.84 Aligned_cols=152 Identities=16% Similarity=0.144 Sum_probs=110.4
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH-hh-c
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA-NK-L 859 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~-~~-~ 859 (1392)
|++|||||++|||+++|+.|+++|++ |++++|+..+ ..+|+++.+..+.....+ .+ .
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~-V~~~~~~~~~--------------------~~~d~~~~~~~~~~~~~~~~~~~ 60 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQ-IVGIDIRDAE--------------------VIADLSTAEGRKQAIADVLAKCS 60 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSSSS--------------------EECCTTSHHHHHHHHHHHHTTCT
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECChHH--------------------HHHHhcCHHHHHHHHHHHHHHhC
Confidence 68999999999999999999999997 8888887421 357999999998887765 33 5
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC--CCCCeEEEe---------------------
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC--PTLGQFVVF--------------------- 916 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~--~~l~~fV~~--------------------- 916 (1392)
+.+|+++||||+... .+.|......+..+...+.+...+.. ...+...++
T Consensus 61 ~~id~lv~~Ag~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (257)
T d1fjha_ 61 KGMDGLVLCAGLGPQ-------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEA 133 (257)
T ss_dssp TCCSEEEECCCCCTT-------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred CCCcEEEEcCCCCCc-------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccC
Confidence 689999999987432 24477778888888888766543321 122333333
Q ss_pred ------cccccccCC-CCChhHHHHHHHHHHHHHHHHHc----CCCeEEEEccccC
Q psy1119 917 ------SSVSCGRGN-AGQTNYGMANSIMERICEARRAE----GLPGLAVEWGAVG 961 (1392)
Q Consensus 917 ------SS~s~~~G~-~gq~~Yaaana~ld~la~~r~~~----Glp~~ai~~g~~~ 961 (1392)
+|+++..+. +++..|+++|+++++|+++.+.+ |..+-+|..|.+.
T Consensus 134 g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~ 189 (257)
T d1fjha_ 134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATE 189 (257)
T ss_dssp TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC--
T ss_pred CcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcC
Confidence 333333333 35678999999999999988665 6667777777663
|
| >d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.22 E-value=4.9e-12 Score=131.35 Aligned_cols=97 Identities=15% Similarity=0.136 Sum_probs=77.7
Q ss_pred CceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe---------
Q psy1119 435 SLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR--------- 505 (1392)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~--------- 505 (1392)
.+++.+.|.|. ++++||+|||.|+|||++|++...+..+.. ..|.++|||++|+|+
T Consensus 11 ~l~i~e~p~P~--------~~~~eVlIkv~a~gic~sD~~~~~~~~~~~-------~~P~i~GhE~~G~V~~vG~~v~~~ 75 (177)
T d1jqba1 11 KLGWIEKERPV--------AGSYDAIVRPLAVSPCTSDIHTVFEGALGD-------RKNMILGHEAVGEVVEVGSEVKDF 75 (177)
T ss_dssp EEEEEECCCCC--------CCTTCEEEEEEEECCCHHHHHHHHHCTTCC-------CSSEECCCCEEEEEEEECTTCCSC
T ss_pred CeEEEEeeCCC--------CCCCEEEEEEEEEecCCCcccccccCCCCC-------CCCccCcceeeEEeeeccccccee
Confidence 48999999886 799999999999999999997765433222 247899999999997
Q ss_pred eCCCeEEEe------------------------------ecCCcccceEEecc--cceEEcCCCCCHhhHhhh
Q psy1119 506 DSGKRVMGL------------------------------TSGRSLANCCETDV--EMAWEIPDQWTLEDAATV 546 (1392)
Q Consensus 506 ~vGdrV~gl------------------------------~~~g~~a~~v~~~~--~~~~~iPd~ls~e~AA~l 546 (1392)
++||||... ..+|+||||+++|. ..++++|+++++++++..
T Consensus 76 ~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~ 148 (177)
T d1jqba1 76 KPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTH 148 (177)
T ss_dssp CTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEE
T ss_pred cCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHH
Confidence 468898631 12389999999986 368999999999887754
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.18 E-value=8.4e-13 Score=139.53 Aligned_cols=152 Identities=13% Similarity=0.091 Sum_probs=105.8
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
..++|++|||||+||||+++|+.|+++|++ |++++|+..+..... +.+... ..+....+|+++.+++++++
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~-V~~~~r~~~~~~~~~---~~~~~~-~~~~~~~~d~~~~~~~~~~~---- 90 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGRKLDKAQAAA---DSVNKR-FKVNVTAAETADDASRAEAV---- 90 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHH---HHHHHH-HTCCCEEEECCSHHHHHHHT----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhccc-hhhcccchHHHHHHH---HHHHhc-cchhhhhhhcccHHHHHHHh----
Confidence 357999999999999999999999999997 899999854333332 232221 23445789999999887654
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHh-hhCCCCCeEEEeccccccc-CCCCChhHHHHH
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSR-TMCPTLGQFVVFSSVSCGR-GNAGQTNYGMAN 935 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~-~~~~~l~~fV~~SS~s~~~-G~~gq~~Yaaan 935 (1392)
+.+|.||||||+. +..++.++|+..+..|+.+.+++...+. ......+....+++..++- ...|...|+++|
T Consensus 91 --~~iDilin~Ag~g----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~y~~sk 164 (191)
T d1luaa1 91 --KGAHFVFTAGAIG----LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLHR 164 (191)
T ss_dssp --TTCSEEEECCCTT----CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTCEEEEETTEEEECHHHHHHHHHHHHH
T ss_pred --cCcCeeeecCccc----cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhccCcEEecceEEEeccCcCcHHHHHHH
Confidence 5799999999963 5678999999999999877766533221 1111123333333333221 123556899999
Q ss_pred HHHHHHHHH
Q psy1119 936 SIMERICEA 944 (1392)
Q Consensus 936 a~ld~la~~ 944 (1392)
+++..|++.
T Consensus 165 ~a~~~l~~s 173 (191)
T d1luaa1 165 ACIAKLFES 173 (191)
T ss_dssp HHHHHHTSC
T ss_pred HHHHHHHhc
Confidence 999887763
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.08 E-value=6.5e-10 Score=121.42 Aligned_cols=204 Identities=11% Similarity=0.103 Sum_probs=120.0
Q ss_pred CCCCceeEeecCCCcccc---ccHHHHhhcCCceEEEecC--------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEE
Q psy1119 1154 VGNNNTIFMVPGIEGIAT---VLEPLAKNINAQVLVFQFD--------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKL 1222 (1392)
Q Consensus 1154 ~g~~~pLF~vp~agG~~~---~y~~La~~L~~~~~v~~l~--------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L 1222 (1392)
.|+++||+|+|+.||... .|..++..|.....|+.++ ......+++.+++...+.|+. ...++|++|
T Consensus 19 ~G~g~~vvllHG~~~~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~i~~--l~~~~~~~l 96 (268)
T d1j1ia_ 19 AGKGQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRIRHLHDFIKA--MNFDGKVSI 96 (268)
T ss_dssp ECCSSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHH--SCCSSCEEE
T ss_pred EcCCCeEEEECCCCCCccHHHHHHHHHHHHhcCCEEEEEcccccccccCCccccccccccccchhhHHH--hhhccccee
Confidence 355689999999998764 4566677787778888875 123346899999988888864 335679999
Q ss_pred EeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCC--cc---ccCCCCChHHHHHHHHhcCC-ccccCCHHHH-----
Q psy1119 1223 VGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYV--LT---SLRKLPDWNAKLNYFLDLMP-EDATHSRTYQ----- 1290 (1392)
Q Consensus 1223 ~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~--~~---~l~~~~~~~~~l~~~~~~~~-~~~~~~~~~l----- 1290 (1392)
+||||||.+|+++|.+-. ..+ .++++++++... .. .+.................. .......+..
T Consensus 97 iG~S~Gg~ia~~~a~~~p---~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (268)
T d1j1ia_ 97 VGNSMGGATGLGVSVLHS---ELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYT 173 (268)
T ss_dssp EEEHHHHHHHHHHHHHCG---GGEEEEEEESCCBCCCC----------CCSCHHHHHHHHHHHSCTTCCCCHHHHHHHHH
T ss_pred eeccccccccchhhccCh---HhhheeeecCCCccccccchhhhhhhhhhhhhhhhHHHHHHHhhhhhhhhhhhhHHHHH
Confidence 999999999999997643 345 788888754321 11 11111111222222222111 1111111111
Q ss_pred --------HHHHHHHHHHHHhhccc-cCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-Ccccccc
Q psy1119 1291 --------RNLAHAAYKRITSILKY-TDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHFTVLD 1359 (1392)
Q Consensus 1291 --------~~~~~~~~~~~~~~~~y-~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~~ml~ 1359 (1392)
................+ .+....++++|++++.++.|. ...+....+.+... ..+++.++| +|+.+++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e 252 (268)
T d1j1ia_ 174 YATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLID-DSWGYIIPHCGHWAMIE 252 (268)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCT-TEEEEEESSCCSCHHHH
T ss_pred hhhhhhhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-CCEEEEECCCCCchHHh
Confidence 11111111111111111 111234688999999999887 44444555666554 478999986 8999998
Q ss_pred ChHH
Q psy1119 1360 NIKS 1363 (1392)
Q Consensus 1360 ~~~~ 1363 (1392)
+|+.
T Consensus 253 ~p~~ 256 (268)
T d1j1ia_ 253 HPED 256 (268)
T ss_dssp SHHH
T ss_pred CHHH
Confidence 8753
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.07 E-value=5.4e-10 Score=123.52 Aligned_cols=203 Identities=13% Similarity=0.169 Sum_probs=121.7
Q ss_pred CCCCceeEeecCCCccccccHHHHhhcCCceEEEecC----C--CC------CCCCHHHHHHHHHHHHhhhccCCCCcEE
Q psy1119 1154 VGNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD----H--TN------PPDTIPEMADSLLPHFKKRLVHGTDEIK 1221 (1392)
Q Consensus 1154 ~g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~----~--e~------~~~sieelA~~y~~~I~~~q~qp~gPy~ 1221 (1392)
.|+++||+|+|+.+++...|.+++..|.....|+.++ + .. ...+++++|+.+.+.++.. +..+++
T Consensus 25 ~G~gp~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~a~~~~~~~~~l---~~~~~~ 101 (293)
T d1ehya_ 25 EGAGPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAADDQAALLDAL---GIEKAY 101 (293)
T ss_dssp EECSSEEEEECCSSCCGGGGHHHHHHHHTTSEEEEECCTTSTTSCCCCTTCGGGGCHHHHHHHHHHHHHHT---TCCCEE
T ss_pred ECCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEecCCcccCCccccccccccccchhhhhHHHhhhhhc---Cccccc
Confidence 3567899999999999999999999998788888876 1 11 1247899999988877633 457899
Q ss_pred EEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccc---cC-----------CC--------CC---hHHHHHHH
Q psy1119 1222 LVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTS---LR-----------KL--------PD---WNAKLNYF 1275 (1392)
Q Consensus 1222 L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~---l~-----------~~--------~~---~~~~l~~~ 1275 (1392)
|+||||||.+|+++|.+-- ..+ .++++++..+..... .. .. .. ....+..+
T Consensus 102 lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (293)
T d1ehya_ 102 VVGHDFAAIVLHKFIRKYS---DRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHF 178 (293)
T ss_dssp EEEETHHHHHHHHHHHHTG---GGEEEEEEECCSCTTC-----------CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHH
T ss_pred cccccccccchhcccccCc---cccceeeeeeccCccccchhhhhhhhhhhhhhhhhccchhhhhhccchhHHHHHHHHh
Confidence 9999999999999987543 334 788888754431000 00 00 00 01111122
Q ss_pred HhcCC-ccccCCHHHHHHHHHHH---------HHHHHhhccccC-----CCCCcccceEEEEeeCCCC-CCChhhcC-cc
Q psy1119 1276 LDLMP-EDATHSRTYQRNLAHAA---------YKRITSILKYTD-----PKHKAFGGNITLLRPTEQA-LPTAEDYG-LS 1338 (1392)
Q Consensus 1276 ~~~~~-~~~~~~~~~l~~~~~~~---------~~~~~~~~~y~~-----~~~~~~~~pi~l~~a~~~~-~~~~~~~~-W~ 1338 (1392)
+.... .......+.+......+ ...++....... ....+++.|++++.++.|. ........ ++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~~~~~~~~~~~ 258 (293)
T d1ehya_ 179 FDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVP 258 (293)
T ss_dssp HHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHH
T ss_pred hhhcccccccccHHHHHhhhhccccchhhhhhhhhhhhccccchhhhhhhhhhccCCceEEEEeCCCCCcCHHHHHHHHH
Confidence 22111 11112233222222111 111222111111 1123577899999999887 44444333 33
Q ss_pred cccCCCeEEEEEcc-CccccccChHH
Q psy1119 1339 KVCKKPVKVHFVDG-NHFTVLDNIKS 1363 (1392)
Q Consensus 1339 ~~~~g~v~v~~v~G-~H~~ml~~~~~ 1363 (1392)
++. ...+++.++| +|+-++++|+.
T Consensus 259 ~~~-~~~~~~~i~~~gH~~~~e~Pe~ 283 (293)
T d1ehya_ 259 KYY-SNYTMETIEDCGHFLMVEKPEI 283 (293)
T ss_dssp HHB-SSEEEEEETTCCSCHHHHCHHH
T ss_pred HhC-CCCEEEEECCCCCchHHHCHHH
Confidence 443 4688999986 89999999864
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.01 E-value=2.1e-09 Score=124.47 Aligned_cols=169 Identities=17% Similarity=0.118 Sum_probs=118.1
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcc--cHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVK--NGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~--~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
|.+|||||+|=||..+++.|.++|.. |+.+.|.... ................++.++.+|++|.++++++++..
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYE-VHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV--- 77 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCE-EEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc---
Confidence 78999999999999999999999997 7777775321 11111111222223457888999999999999999875
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-CCCCeEEEecccccccCCC------------
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC-PTLGQFVVFSSVSCGRGNA------------ 926 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~~l~~fV~~SS~s~~~G~~------------ 926 (1392)
.+|.|||+|+...... +.++....++.|+.||.||-++++... .....||++||.+. .|.+
T Consensus 78 -~~d~v~h~aa~~~~~~----~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~v-YG~~~~~~~~E~~~~~ 151 (357)
T d1db3a_ 78 -QPDEVYNLGAMSHVAV----SFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSEL-YGLVQEIPQKETTPFY 151 (357)
T ss_dssp -CCSEEEECCCCCTTTT----TTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG-GTTCCSSSBCTTSCCC
T ss_pred -CCCEEEEeecccccch----hhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhh-hCCCCCCCcCCCCCCC
Confidence 5899999998754321 223445678999999999998887643 23357999998653 3321
Q ss_pred CChhHHHHHHHHHHHHHHHH-HcCCCeEEEEcccc
Q psy1119 927 GQTNYGMANSIMERICEARR-AEGLPGLAVEWGAV 960 (1392)
Q Consensus 927 gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~ 960 (1392)
....|+.+|.+.+.+++.-+ +.|++.+.+..+.+
T Consensus 152 P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~v 186 (357)
T d1db3a_ 152 PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNH 186 (357)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE
T ss_pred CCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccc
Confidence 25679999999999888644 45999988877543
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=98.97 E-value=3.1e-09 Score=116.15 Aligned_cols=202 Identities=15% Similarity=0.122 Sum_probs=117.4
Q ss_pred CCCceeEeecCCCccccccHHHHhhcC-CceEEEecC------C--CCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNIN-AQVLVFQFD------H--TNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~-~~~~v~~l~------~--e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
|.++||+|+|+.+++...|.+++..|. ....|+.++ . .....+++++|+++.+.++.. ...|++|+||
T Consensus 21 G~G~~ivllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l---~~~~~~lvGh 97 (277)
T d1brta_ 21 GTGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETL---DLQDAVLVGF 97 (277)
T ss_dssp CSSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH---TCCSEEEEEE
T ss_pred ccCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccccccchhhhhhhhhhhhhcc---Cccccccccc
Confidence 557899999999999999999998885 457778775 1 222358999999998888754 3468999999
Q ss_pred chhH-HHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccC--CCCChHHH---------------HHHHHhc-CCc--c-
Q psy1119 1226 SFGG-MVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLR--KLPDWNAK---------------LNYFLDL-MPE--D- 1282 (1392)
Q Consensus 1226 S~Gg-~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~--~~~~~~~~---------------l~~~~~~-~~~--~- 1282 (1392)
|||| .+|..+|.+- -..+ .++++++.++....... ........ ...+... ... .
T Consensus 98 S~G~~~~~~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (277)
T d1brta_ 98 STGTGEVARYVSSYG---TARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENL 174 (277)
T ss_dssp GGGHHHHHHHHHHHC---STTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHB
T ss_pred ccchhhhhHHHHHhh---hcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhccchhhhhhccccccccchhh
Confidence 9996 6677777532 2345 78899886654311110 00000010 0111110 000 0
Q ss_pred -ccCCHHHHHHHHHH-----HHHHHHhhccccC---CCCCcccceEEEEeeCCCC-CCChhh-cCcccccCCCeEEEEEc
Q psy1119 1283 -ATHSRTYQRNLAHA-----AYKRITSILKYTD---PKHKAFGGNITLLRPTEQA-LPTAED-YGLSKVCKKPVKVHFVD 1351 (1392)
Q Consensus 1283 -~~~~~~~l~~~~~~-----~~~~~~~~~~y~~---~~~~~~~~pi~l~~a~~~~-~~~~~~-~~W~~~~~g~v~v~~v~ 1351 (1392)
.....+........ +.........+.. ...+++++|++++.++.|. ...+.. ..+.+.. ...+++.++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~ 253 (277)
T d1brta_ 175 GTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKAL-PSAEYVEVE 253 (277)
T ss_dssp TTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHC-TTSEEEEET
T ss_pred hhhhhHHHhhhhhcccchhhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCCcCHHHHHHHHHHhC-CCCEEEEEC
Confidence 00122222111111 1111222222211 1234678999999999887 433322 2344443 347899998
Q ss_pred c-CccccccChHH
Q psy1119 1352 G-NHFTVLDNIKS 1363 (1392)
Q Consensus 1352 G-~H~~ml~~~~~ 1363 (1392)
| +|+.++++|+.
T Consensus 254 ~~gH~~~~e~p~~ 266 (277)
T d1brta_ 254 GAPHGLLWTHAEE 266 (277)
T ss_dssp TCCTTHHHHTHHH
T ss_pred CCCCchHHhCHHH
Confidence 5 99999988864
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=98.96 E-value=3.6e-09 Score=115.57 Aligned_cols=200 Identities=14% Similarity=0.233 Sum_probs=115.9
Q ss_pred CCCceeEeecCCCccccccHH---HHhhcCCceEEEecC------C---CCCCCCHHHHHHHHHHHHhhhccCCCCcEEE
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEP---LAKNINAQVLVFQFD------H---TNPPDTIPEMADSLLPHFKKRLVHGTDEIKL 1222 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~---La~~L~~~~~v~~l~------~---e~~~~sieelA~~y~~~I~~~q~qp~gPy~L 1222 (1392)
|+++||+|+|+.++++..|.. +++.|.....|+.++ . .....+++..++.+...++.. +..|++|
T Consensus 21 G~G~pvvllHG~~~~~~~~~~~~~~~~~l~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~l 97 (271)
T d1uk8a_ 21 GEGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHIIGIMDAL---EIEKAHI 97 (271)
T ss_dssp CCSSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTTCCCCHHHHHHHHHHHHHHT---TCCSEEE
T ss_pred eeCCeEEEECCCCCCccHHHHHHHHHHHHhCCCEEEEEeCCCCCCccccccccccccccchhhhhhhhhh---cCCCceE
Confidence 567899999999988777654 556666778888875 1 122357888888877666533 4568999
Q ss_pred EeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCcc------ccCCCCChHHHHHHHHhcC-CccccCCHHHHHHHH
Q psy1119 1223 VGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLT------SLRKLPDWNAKLNYFLDLM-PEDATHSRTYQRNLA 1294 (1392)
Q Consensus 1223 ~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~------~l~~~~~~~~~l~~~~~~~-~~~~~~~~~~l~~~~ 1294 (1392)
+||||||.+|.++|.+... .+ .++++++.+..... .....+... ....+.... ...........+...
T Consensus 98 vG~S~Gg~ia~~~a~~~p~---~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (271)
T d1uk8a_ 98 VGNAFGGGLAIATALRYSE---RVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIE-NMRNLLDIFAYDRSLVTDELARLRY 173 (271)
T ss_dssp EEETHHHHHHHHHHHHCGG---GEEEEEEESCCCSCCCCCHHHHHHHTCCSCHH-HHHHHHHHHCSCGGGCCHHHHHHHH
T ss_pred eeccccceeehHHHHhhhc---cchheeecccCCCcccchhhhhhhhhccchhH-HHHHHHHHHhhhcccchhHHHHHHH
Confidence 9999999999999976532 34 77888875533200 011112211 122222211 111111111111110
Q ss_pred H-----HHHHHHH------------hhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-Ccc
Q psy1119 1295 H-----AAYKRIT------------SILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHF 1355 (1392)
Q Consensus 1295 ~-----~~~~~~~------------~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~ 1355 (1392)
. .+...+. ..... .....++++|++++.++.|. ........+.+... ..+++.++| +|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~ 251 (271)
T d1uk8a_ 174 EASIQPGFQESFSSMFPEPRQRWIDALASS-DEDIKTLPNETLIIHGREDQVVPLSSSLRLGELID-RAQLHVFGRCGHW 251 (271)
T ss_dssp HHHTSTTHHHHHHTTSCSSTHHHHHHHCCC-HHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCT-TEEEEEESSCCSC
T ss_pred hhhhchhHHHHHHhhcchhhhhhhhhcccc-HHHHHhhccceeEEecCCCCCcCHHHHHHHHHhCC-CCEEEEECCCCCc
Confidence 0 0001110 00000 11124688999999999887 44444455666554 478999985 899
Q ss_pred ccccChHH
Q psy1119 1356 TVLDNIKS 1363 (1392)
Q Consensus 1356 ~ml~~~~~ 1363 (1392)
.++++|+.
T Consensus 252 ~~~e~p~~ 259 (271)
T d1uk8a_ 252 TQIEQTDR 259 (271)
T ss_dssp HHHHTHHH
T ss_pred hHHHCHHH
Confidence 99988863
|
| >d2gdwa1 a.28.1.2 (A:8-83) Peptidyl carrier protein (PCP), thioester domain {Bacillus brevis [TaxId: 1393]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Peptidyl carrier domain domain: Peptidyl carrier protein (PCP), thioester domain species: Bacillus brevis [TaxId: 1393]
Probab=98.95 E-value=3.4e-10 Score=99.83 Aligned_cols=66 Identities=17% Similarity=0.319 Sum_probs=61.7
Q ss_pred cchHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHh
Q psy1119 1019 ATNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAV 1087 (1392)
Q Consensus 1019 ~~~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~ 1087 (1392)
.+.|.+.|+++|++ +.++++++|+++|+|||+++++.++|+++|++.+++.++ .++|+++||++++
T Consensus 9 E~~l~~i~~~vL~~---~~i~~~~~f~~lG~dSl~a~~l~~~i~~~~~~~l~~~~l~~~pTi~~LA~~i~ 75 (76)
T d2gdwa1 9 ESKLAEIWERVLGV---SGIGILDNFFQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVA 75 (76)
T ss_dssp HHHHHHHHHHHTTS---SCCCTTTTSSTTTCTTHHHHHHHHHHHHTTSSCCTTHHHHHSCSHHHHHHHHS
T ss_pred HHHHHHHHHHHcCC---CCCCCCCCHHHcCCChHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHhc
Confidence 35689999999998 569999999999999999999999999999999999999 9999999999875
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=98.94 E-value=2e-08 Score=109.45 Aligned_cols=215 Identities=10% Similarity=0.031 Sum_probs=122.1
Q ss_pred CCCceeEeecCCCccccccHHHHhhcC-CceEEEecC--------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNIN-AQVLVFQFD--------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~-~~~~v~~l~--------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
|.++||+|+|+.+++...|.+++..|. ....|+.++ ......+++++++++.+.+... ..+|+.++||
T Consensus 17 G~g~~ivlvHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l---~~~~~~lvGh 93 (274)
T d1a8qa_ 17 GQGRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDLNDLLTDL---DLRDVTLVAH 93 (274)
T ss_dssp CSSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHT---TCCSEEEEEE
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccchhhHHHHHHHHHHh---hhhhhccccc
Confidence 556899999999999999999998884 457778775 1223468999999888888743 4568999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccC-CCCChHHH---------------HHHHHhc-CCcc---cc
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLR-KLPDWNAK---------------LNYFLDL-MPED---AT 1284 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~-~~~~~~~~---------------l~~~~~~-~~~~---~~ 1284 (1392)
||||.+|..+|.+- .-+.+ .++++++.++....... ........ ...+... .... ..
T Consensus 94 S~Gg~~~~~~~a~~--~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (274)
T d1a8qa_ 94 SMGGGELARYVGRH--GTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNK 171 (274)
T ss_dssp TTHHHHHHHHHHHH--CSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCC
T ss_pred ccccchHHHHHHHh--hhccceeEEEEeccCccchhhhhccchhhHHHHHHHHhhhhhhhHHHhhhhhhhhhhccccchh
Confidence 99999988866543 22345 77888876554211110 00000000 0011111 1110 11
Q ss_pred CCHHHHHHHH--------HHHHHHHHhhccccC-CCCCcccceEEEEeeCCCC-CCChhh-cCcccccCCCeEEEEEcc-
Q psy1119 1285 HSRTYQRNLA--------HAAYKRITSILKYTD-PKHKAFGGNITLLRPTEQA-LPTAED-YGLSKVCKKPVKVHFVDG- 1352 (1392)
Q Consensus 1285 ~~~~~l~~~~--------~~~~~~~~~~~~y~~-~~~~~~~~pi~l~~a~~~~-~~~~~~-~~W~~~~~g~v~v~~v~G- 1352 (1392)
.......... ............... .....+++|++++.+++|. ...+.. ..+.+.. ...+++.++|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~ 250 (274)
T d1a8qa_ 172 VTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQII-PNAELKVYEGS 250 (274)
T ss_dssp CCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHS-TTCEEEEETTC
T ss_pred hhhhHHHHHHHhhhccchhhhhhHHHHhhccchHHHHHhccceeeeeccCCCCCcCHHHHHHHHHHhC-CCCEEEEECCC
Confidence 1111111110 111111111111111 1124688999999999887 333322 2344443 3478999985
Q ss_pred CccccccChHHHHHHHhhhcccC
Q psy1119 1353 NHFTVLDNIKSAQIIMHEDSTDF 1375 (1392)
Q Consensus 1353 ~H~~ml~~~~~~~i~~~l~~~L~ 1375 (1392)
+|+.++..++-......+.+.|+
T Consensus 251 gH~~~~~~~~p~~~~~~i~~FL~ 273 (274)
T d1a8qa_ 251 SHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp CTTTTTSTTHHHHHHHHHHHHHT
T ss_pred CCcccccccCHHHHHHHHHHHHC
Confidence 89887765554455555555543
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=98.93 E-value=1.3e-08 Score=110.42 Aligned_cols=207 Identities=15% Similarity=0.144 Sum_probs=117.4
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecC-------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhH
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD-------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGG 1229 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~-------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg 1229 (1392)
++||+|+|+.+++...|.++++.|.....|+.++ ......++.++++.... . ...+.+|+||||||
T Consensus 11 ~~~lvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~d~~~~~~~----~---~~~~~~l~GhS~Gg 83 (256)
T d1m33a_ 11 NVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQ----Q---APDKAIWLGWSLGG 83 (256)
T ss_dssp SSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTCCSCCCCCHHHHHHHHHT----T---SCSSEEEEEETHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEeCCCCCCcccccccccccccccccc----c---cccceeeeecccch
Confidence 3789999999999999999999998888888876 22345677766654432 2 34679999999999
Q ss_pred HHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCCh------HH--------HHHHHHhcCCccccCCHHHHHHHH
Q psy1119 1230 MVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDW------NA--------KLNYFLDLMPEDATHSRTYQRNLA 1294 (1392)
Q Consensus 1230 ~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~------~~--------~l~~~~~~~~~~~~~~~~~l~~~~ 1294 (1392)
.+|.++|.+.. ..+ .+++++..|............. .. .+..+...............+.+.
T Consensus 84 ~ia~~~a~~~p---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (256)
T d1m33a_ 84 LVASQIALTHP---ERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALK 160 (256)
T ss_dssp HHHHHHHHHCG---GGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTTHHHHHHHHH
T ss_pred HHHHHHHHhCC---cccceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHhhhhhccccchhhHHHHHH
Confidence 99999997643 234 6788887654321111100000 00 011111111000000111111111
Q ss_pred -----------HHHHHHHHhhccccC-CCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-CccccccC
Q psy1119 1295 -----------HAAYKRITSILKYTD-PKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHFTVLDN 1360 (1392)
Q Consensus 1295 -----------~~~~~~~~~~~~y~~-~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~~ml~~ 1360 (1392)
..+...+.....+.. .....+++|++++.+++|. ...+......+... ..+++.++| +|+-++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~l~~~~~-~~~~~~i~~~gH~~~~e~ 239 (256)
T d1m33a_ 161 KTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP-HSESYIFAKAAHAPFISH 239 (256)
T ss_dssp HHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCT-TCEEEEETTCCSCHHHHS
T ss_pred HhhhhcchhhHHHHHhhhhhhcccchHHHHHhccCCccccccccCCCCCHHHHHHHHHHCC-CCEEEEECCCCCchHHHC
Confidence 111112222222222 1234688999999999887 44333444455443 468899986 89988988
Q ss_pred hHHHHHHHhhhcccCC
Q psy1119 1361 IKSAQIIMHEDSTDFK 1376 (1392)
Q Consensus 1361 ~~~~~i~~~l~~~L~~ 1376 (1392)
|+. .+..|.+.|++
T Consensus 240 p~~--~~~~l~~fl~~ 253 (256)
T d1m33a_ 240 PAE--FCHLLVALKQR 253 (256)
T ss_dssp HHH--HHHHHHHHHTT
T ss_pred HHH--HHHHHHHHHHH
Confidence 763 33444554443
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=98.89 E-value=1.2e-08 Score=117.08 Aligned_cols=163 Identities=16% Similarity=0.165 Sum_probs=116.5
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCcc
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVD 863 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~ 863 (1392)
+|||||+|=||..+++.|+++|.. |+.+.|............+.+.. .++.++++|++|.+.+.++++.. .+|
T Consensus 3 iLItG~tGfIG~~l~~~L~~~g~~-V~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~l~~~~~~~----~~d 75 (338)
T d1udca_ 3 VLVTGGSGYIGSHTCVQLLQNGHD-VIILDNLCNSKRSVLPVIERLGG--KHPTFVEGDIRNEALMTEILHDH----AID 75 (338)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCTTHHHHHHHHHT--SCCEEEECCTTCHHHHHHHHHHT----TCS
T ss_pred EEEECCCCHHHHHHHHHHHHCcCE-EEEEECCCCcchhhHHHHHhhcC--CCCEEEEeecCCHHHHHHHHhcc----CCC
Confidence 899999999999999999999987 66665532222222222333333 35677899999999998888753 589
Q ss_pred EEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC------------CCChhH
Q psy1119 864 GIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN------------AGQTNY 931 (1392)
Q Consensus 864 gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~------------~gq~~Y 931 (1392)
.|||+|+.... . .+.++....+++|+.|+.++.++++.. +...||++||.+...+. ..+..|
T Consensus 76 ~ViHlAa~~~~-~---~~~~~~~~~~~~Nv~gt~nlL~~~~~~--~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y 149 (338)
T d1udca_ 76 TVIHFAGLKAV-G---ESVQKPLEYYDNNVNGTLRLISAMRAA--NVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPY 149 (338)
T ss_dssp EEEECCSCCCH-H---HHHHCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHH
T ss_pred EEEECCCccch-h---hHHhCHHHHHHhHHHHHHHHHHHHHHh--CCCEEEecCcceEEccccccccccccccCCCcchH
Confidence 99999985321 1 122334578899999999999998765 45789999998765322 236789
Q ss_pred HHHHHHHHHHHH-HHHHc-CCCeEEEEccc
Q psy1119 932 GMANSIMERICE-ARRAE-GLPGLAVEWGA 959 (1392)
Q Consensus 932 aaana~ld~la~-~r~~~-Glp~~ai~~g~ 959 (1392)
+.+|.+.+.++. +.++. +.+...+..+.
T Consensus 150 ~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~ 179 (338)
T d1udca_ 150 GKSKLMVEQILTDLQKAQPDWSIALLRYFN 179 (338)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCEEEEEEECE
T ss_pred HHHHhhhhHHHHHHHhhccCCeEEEEeecc
Confidence 999999999887 34443 67766665544
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=98.88 E-value=7.5e-09 Score=113.99 Aligned_cols=201 Identities=14% Similarity=0.257 Sum_probs=114.4
Q ss_pred CCceeEeecCCCcccc---ccHHHHhhcCCceEEEecC------CCCC---C----CCHHHHHHHHHHHHhhhccCCCCc
Q psy1119 1156 NNNTIFMVPGIEGIAT---VLEPLAKNINAQVLVFQFD------HTNP---P----DTIPEMADSLLPHFKKRLVHGTDE 1219 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~---~y~~La~~L~~~~~v~~l~------~e~~---~----~sieelA~~y~~~I~~~q~qp~gP 1219 (1392)
++|||+|+|+.+++.. .|.++++.|.....|+.++ ...+ . .++++.++.+.+.|+.. ...|
T Consensus 25 ~~p~ivllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~i~~~---~~~~ 101 (281)
T d1c4xa_ 25 QSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHF---GIEK 101 (281)
T ss_dssp TSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCSSHHHHHHHHHHHHHHHHHHH---TCSS
T ss_pred CCCEEEEECCCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCCCccccccccccccchhhHHHhhhhcccccccc---cccc
Confidence 4589999999987654 4667778887778888875 1111 1 24567777777777643 3468
Q ss_pred EEEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCc---------cccCCCCChHHHHHHHHhcC--CccccCCH
Q psy1119 1220 IKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVL---------TSLRKLPDWNAKLNYFLDLM--PEDATHSR 1287 (1392)
Q Consensus 1220 y~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~---------~~l~~~~~~~~~l~~~~~~~--~~~~~~~~ 1287 (1392)
+.|+||||||.+|+++|.+- ...+ .++++++.+.... ......+........+.... +.......
T Consensus 102 ~~lvGhS~Gg~ia~~~a~~~---p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (281)
T d1c4xa_ 102 SHIVGNSMGGAVTLQLVVEA---PERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGME 178 (281)
T ss_dssp EEEEEETHHHHHHHHHHHHC---GGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCHHHHHHHHHTTSSCSTTCTTHH
T ss_pred ceeccccccccccccccccc---cccccceEEeccccCccccchhHHHHHHHhhhhcccchhhhhhhhhcccccccchhh
Confidence 99999999999999999753 2345 7889987543210 00111111111111111111 11111111
Q ss_pred HHHH------------HHHHHHHHHHHh-hccccC--CCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEc
Q psy1119 1288 TYQR------------NLAHAAYKRITS-ILKYTD--PKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVD 1351 (1392)
Q Consensus 1288 ~~l~------------~~~~~~~~~~~~-~~~y~~--~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~ 1351 (1392)
.... .....+...+.. ...+.. .....++.|++++.++.|. ...+....+.+... ..+++.++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~ 257 (281)
T d1c4xa_ 179 EIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLK-HAELVVLD 257 (281)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCS-SEEEEEES
T ss_pred hHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEeCCCCCcCHHHHHHHHHHCC-CCEEEEEC
Confidence 1111 111111111111 111111 1124678999999999887 55555555666554 46889999
Q ss_pred c-CccccccChHH
Q psy1119 1352 G-NHFTVLDNIKS 1363 (1392)
Q Consensus 1352 G-~H~~ml~~~~~ 1363 (1392)
| +|+-++++|+.
T Consensus 258 ~~gH~~~~e~p~~ 270 (281)
T d1c4xa_ 258 RCGHWAQLERWDA 270 (281)
T ss_dssp SCCSCHHHHSHHH
T ss_pred CCCCchHHhCHHH
Confidence 5 89999998853
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=98.87 E-value=6.5e-09 Score=113.80 Aligned_cols=98 Identities=18% Similarity=0.240 Sum_probs=73.6
Q ss_pred CCCCceeEeecCCCccccccHHHHhhc-CCceEEEecC--------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEe
Q psy1119 1154 VGNNNTIFMVPGIEGIATVLEPLAKNI-NAQVLVFQFD--------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVG 1224 (1392)
Q Consensus 1154 ~g~~~pLF~vp~agG~~~~y~~La~~L-~~~~~v~~l~--------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G 1224 (1392)
.|.++||+|+|+.+++...|.++++.| .....++.++ .....-+++++|+++.+.|+.. +..|++|+|
T Consensus 20 ~G~g~~illlHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~di~~~i~~l---~~~~~~lvG 96 (279)
T d1hkha_ 20 QGSGQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLETL---DLRDVVLVG 96 (279)
T ss_dssp ESSSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH---TCCSEEEEE
T ss_pred EccCCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEechhhCCccccccccchhhhhhhhhhhhhhc---CcCcccccc
Confidence 355689999999999999999999877 5668888876 1223458999999998888744 345899999
Q ss_pred echhH-HHHHHHHHHHHHcCCcc-EEEEEeCCCCC
Q psy1119 1225 FSFGG-MVALELAIKLEQLGTKC-HLYLVDSAPDY 1257 (1392)
Q Consensus 1225 ~S~Gg-~VA~EmA~~Le~~G~~v-~LvLiD~~p~~ 1257 (1392)
||||| .+|..+|++- -..+ .++++++.++.
T Consensus 97 hS~Gg~~~a~~~a~~~---p~~v~~lvli~~~~~~ 128 (279)
T d1hkha_ 97 FSMGTGELARYVARYG---HERVAKLAFLASLEPF 128 (279)
T ss_dssp ETHHHHHHHHHHHHHC---STTEEEEEEESCCCSB
T ss_pred ccccccchhhhhcccc---ccccceeEEeeccCCc
Confidence 99996 6666666532 2345 78888876544
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=98.87 E-value=1.9e-08 Score=110.25 Aligned_cols=97 Identities=12% Similarity=0.150 Sum_probs=73.6
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCC------CCCHHHHHHHHHHHHhhhccCCCCcEEE
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNP------PDTIPEMADSLLPHFKKRLVHGTDEIKL 1222 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~------~~sieelA~~y~~~I~~~q~qp~gPy~L 1222 (1392)
|.++||+|+|+.+|+...|.+++..|.....|+.++ ...+ .......++.....+... ....++.|
T Consensus 26 G~g~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l 103 (298)
T d1mj5a_ 26 GTGDPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEHRDYLDALWEAL--DLGDRVVL 103 (298)
T ss_dssp SCSSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHHHHHHHHHHHHT--TCTTCEEE
T ss_pred cCCCcEEEECCCCCCHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCccccccccccchhhhhhccccccc--cccccCeE
Confidence 566899999999999999999999999888888876 1111 234566666666666533 25678999
Q ss_pred EeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1223 VGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1223 ~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
+||||||.+|+++|.+-. ..+ .++++++.+.
T Consensus 104 vGhS~Gg~va~~~a~~~p---~~v~~l~~~~~~~~ 135 (298)
T d1mj5a_ 104 VVHDWGSALGFDWARRHR---ERVQGIAYMEAIAM 135 (298)
T ss_dssp EEEHHHHHHHHHHHHHTG---GGEEEEEEEEECCS
T ss_pred EEecccchhHHHHHHHHH---hhhheeeccccccc
Confidence 999999999999998643 345 7888887553
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=98.86 E-value=1.6e-08 Score=111.19 Aligned_cols=202 Identities=14% Similarity=0.146 Sum_probs=114.1
Q ss_pred CCCCceeEeecCCCccccccHHHHh----hcCCceEEEecC----C--C---CCCCCHHHHHHHHHHHHhhhccCCCCcE
Q psy1119 1154 VGNNNTIFMVPGIEGIATVLEPLAK----NINAQVLVFQFD----H--T---NPPDTIPEMADSLLPHFKKRLVHGTDEI 1220 (1392)
Q Consensus 1154 ~g~~~pLF~vp~agG~~~~y~~La~----~L~~~~~v~~l~----~--e---~~~~sieelA~~y~~~I~~~q~qp~gPy 1220 (1392)
.|.++||+|+|+.+++...|.++.+ .+.....|+.++ + . ....+...+++.+.+.++.. .-.|+
T Consensus 27 ~G~G~~ivllHG~~~~~~~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~i~~li~~l---~~~~~ 103 (283)
T d2rhwa1 27 AGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL---DIDRA 103 (283)
T ss_dssp ECCSSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHHH---TCCCE
T ss_pred EcCCCeEEEECCCCCChhHHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccccchhhhhcccccccc---ccccc
Confidence 4567899999999999887665444 445667788875 1 1 12245566676666666533 34589
Q ss_pred EEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCC--h-----------HHHHHHHH-hcCCccccC
Q psy1119 1221 KLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPD--W-----------NAKLNYFL-DLMPEDATH 1285 (1392)
Q Consensus 1221 ~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~--~-----------~~~l~~~~-~~~~~~~~~ 1285 (1392)
+|+||||||.+|.++|.+.. ..+ .++++++.+.... ....... . ........ .........
T Consensus 104 ~lvGhS~Gg~ia~~~a~~~p---~~v~~lil~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (283)
T d2rhwa1 104 HLVGNAMGGATALNFALEYP---DRIGKLILMGPGGLGPS-MFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLI 179 (283)
T ss_dssp EEEEETHHHHHHHHHHHHCG---GGEEEEEEESCSCCCCC-SSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGGC
T ss_pred ccccccchHHHHHHHHHHhh---hhcceEEEeCCCcCCcc-hhhhhhHHHHHHHHHHhhhhhhhhHHHHHHHhhcccccC
Confidence 99999999999999987643 345 7888886432110 0000000 0 00111111 111111222
Q ss_pred CHHHHHHHHHHHHH-----------HHHh-hccccCC-CCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEc
Q psy1119 1286 SRTYQRNLAHAAYK-----------RITS-ILKYTDP-KHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVD 1351 (1392)
Q Consensus 1286 ~~~~l~~~~~~~~~-----------~~~~-~~~y~~~-~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~ 1351 (1392)
.++........+.. .... ...+... ....+++|++++.+..|. ...+....+.+... ..+++.++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~ 258 (283)
T d2rhwa1 180 TEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNID-DARLHVFS 258 (283)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSS-SEEEEEES
T ss_pred cHHHHHHHHHHhhhhhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcCHHHHHHHHHhCC-CCEEEEEC
Confidence 33332222211111 1111 1111111 123678999999999987 55554445555543 47899998
Q ss_pred c-CccccccChHH
Q psy1119 1352 G-NHFTVLDNIKS 1363 (1392)
Q Consensus 1352 G-~H~~ml~~~~~ 1363 (1392)
| +|+.++++|+.
T Consensus 259 ~~gH~~~~e~p~~ 271 (283)
T d2rhwa1 259 KCGHWAQWEHADE 271 (283)
T ss_dssp SCCSCHHHHTHHH
T ss_pred CCCCchHHhCHHH
Confidence 6 89999988763
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.84 E-value=3.1e-08 Score=115.80 Aligned_cols=175 Identities=13% Similarity=0.036 Sum_probs=121.2
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEE--ecCCC----------cccHHHHHHHHHHhc-CCceEEEEeccCCCHH
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVL--TSRSG----------VKNGYQALRIKIWKS-YDVQVLISTDDITTEA 847 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl--~sRs~----------~~~~~~~~~~~~l~~-~G~~v~~~~~Dv~~~~ 847 (1392)
++.+|||||+|=||.+++++|.++|.+.+++ ++|+. .........+..++. .+.++.++.+|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 3678999999999999999999999984443 12210 001111122222222 2456788899999999
Q ss_pred HHHHHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC--
Q psy1119 848 GVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN-- 925 (1392)
Q Consensus 848 ~v~~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~-- 925 (1392)
.++++++.. .+|.|||+|+.. .......+.+.....+.+|+.|+.++-++++... ...+|++.||.+...+.
T Consensus 81 ~l~~~~~~~----~~d~ViHlAa~~-~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~~i~~ss~~~~~~~~~ 154 (393)
T d1i24a_ 81 FLAESFKSF----EPDSVVHFGEQR-SAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTPNI 154 (393)
T ss_dssp HHHHHHHHH----CCSEEEECCSCC-CHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCCSS
T ss_pred HHHHHHHhh----cchheecccccc-ccccccccccccccccccccccccHHHHHHHHhc-cccceeecccccccccccc
Confidence 999998875 689999999753 2334455667778889999999999988887652 22466666665543211
Q ss_pred ----------------------CCChhHHHHHHHHHHHHHHHH-HcCCCeEEEEccccC
Q psy1119 926 ----------------------AGQTNYGMANSIMERICEARR-AEGLPGLAVEWGAVG 961 (1392)
Q Consensus 926 ----------------------~gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~~ 961 (1392)
...+.|+++|.+.+.+++.-. ..|++...+.++.+-
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~ 213 (393)
T d1i24a_ 155 DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVY 213 (393)
T ss_dssp CBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE
T ss_pred ccccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeeccccccc
Confidence 112469999999999987544 559999888887653
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=98.82 E-value=6.3e-09 Score=114.69 Aligned_cols=95 Identities=9% Similarity=0.137 Sum_probs=74.7
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCceEEEecC------C--CCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------H--TNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~--e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
.++||+|+|+.+++...|.++++.|.....|+.++ . .....+++++++++.+.|+.. ...+++|+||||
T Consensus 28 ~~p~lvllHG~~~~~~~~~~~~~~L~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~lvGhS~ 104 (291)
T d1bn7a_ 28 DGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDHVRYLDAFIEAL---GLEEVVLVIHDW 104 (291)
T ss_dssp SSSCEEEECCTTCCGGGGTTTHHHHTTTSCEEEECCTTSTTSCCCSCCCCHHHHHHHHHHHHHHT---TCCSEEEEEEHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEEeCCCCccccccccccchhHHHHHHhhhhhhh---cccccccccccc
Confidence 45799999999999999999999998777788775 1 123468999999888777643 456899999999
Q ss_pred hHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1228 GGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
||.+|.++|.+-.+ .+ .++++++.+.
T Consensus 105 Gg~ia~~~a~~~p~---~~~~li~~~~~~~ 131 (291)
T d1bn7a_ 105 GSALGFHWAKRNPE---RVKGIACMEFIRP 131 (291)
T ss_dssp HHHHHHHHHHHCGG---GEEEEEEEEECCC
T ss_pred ccchhHHHHHhCCc---ceeeeeeeccccC
Confidence 99999999876543 34 6777776543
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.81 E-value=2.2e-08 Score=115.01 Aligned_cols=163 Identities=14% Similarity=0.137 Sum_probs=114.0
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
|++|||||+|=||..++++|.++|.+ |+.++|..............+... .+.++.+|++|.++++.+++.. .
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~-V~~~d~~~~~~~~~~~~~~~~~~~--~v~~~~~Dl~d~~~l~~~~~~~----~ 74 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYD-CVVADNLSNSTYDSVARLEVLTKH--HIPFYEVDLCDRKGLEKVFKEY----K 74 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCTHHHHHHHHHHTS--CCCEEECCTTCHHHHHHHHHHS----C
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCe-EEEEECCCCcchhHHHhHHhhccc--CCeEEEeecCCHHHHHHHHhcc----C
Confidence 68999999999999999999999997 555554322222222222333333 4567789999999999888753 6
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC---------------C
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN---------------A 926 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~---------------~ 926 (1392)
+|.|||+|+...... . .+.-......|+.|+.+|.++++.. ....||++||++..-.+ .
T Consensus 75 ~d~VihlAa~~~~~~-~---~~~~~~~~~~N~~~t~~ll~~~~~~--~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~ 148 (347)
T d1z45a2 75 IDSVIHFAGLKAVGE-S---TQIPLRYYHNNILGTVVLLELMQQY--NVSKFVFSSSATVYGDATRFPNMIPIPEECPLG 148 (347)
T ss_dssp CCEEEECCSCCCHHH-H---HHSHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCC
T ss_pred CCEEEEccccccccc-c---ccCcccccccchhhhHHHHHHHHhc--ccceEEeecceeeecCcccCCCCCccccccCCC
Confidence 899999998643211 1 1223456778999999999998765 55689999997654211 1
Q ss_pred CChhHHHHHHHHHHHHHHHHH---cCCCeEEEEc
Q psy1119 927 GQTNYGMANSIMERICEARRA---EGLPGLAVEW 957 (1392)
Q Consensus 927 gq~~Yaaana~ld~la~~r~~---~Glp~~ai~~ 957 (1392)
....|+.+|.+.+.+++..++ .+++...+..
T Consensus 149 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~ 182 (347)
T d1z45a2 149 PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRY 182 (347)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEE
T ss_pred CCChhHhHHHHHHHHHHHHHHhhccCCcEEEEee
Confidence 245699999999998876543 3566555543
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.80 E-value=2.4e-08 Score=111.84 Aligned_cols=95 Identities=13% Similarity=0.253 Sum_probs=73.1
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCC-ceEEEecC------CCCC----CCCHHHHHHHHHHHHhhhccCCCCcEEEE
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD------HTNP----PDTIPEMADSLLPHFKKRLVHGTDEIKLV 1223 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~------~e~~----~~sieelA~~y~~~I~~~q~qp~gPy~L~ 1223 (1392)
|+++||+|+|+.+++...|..+++.|.. ...|+.++ ...+ ..+++.+++...+.++.. ...+++|+
T Consensus 30 G~gp~vlllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~i~~l~~~l---~~~~~~lv 106 (322)
T d1zd3a2 30 GSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKL---GLSQAVFI 106 (322)
T ss_dssp CCSSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEEECTTSTTSCCCSCGGGGSHHHHHHHHHHHHHHH---TCSCEEEE
T ss_pred cCCCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEeccccccccccccccccccccccchhhhhhhhcc---cccccccc
Confidence 5668999999999999999999999954 47788765 1111 137888888877777643 35689999
Q ss_pred eechhHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1224 GFSFGGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1224 G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
||||||.+|+++|.+.. ..+ .++++++++
T Consensus 107 GhS~Gg~va~~~a~~~p---~~v~~lvl~~~~~ 136 (322)
T d1zd3a2 107 GHDWGGMLVWYMALFYP---ERVRAVASLNTPF 136 (322)
T ss_dssp EETHHHHHHHHHHHHCT---TTEEEEEEESCCC
T ss_pred cccchHHHHHHHHHhCC---ccccceEEEcccc
Confidence 99999999999997653 345 888888743
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=98.79 E-value=3.5e-09 Score=113.14 Aligned_cols=95 Identities=19% Similarity=0.135 Sum_probs=75.2
Q ss_pred CceeEeecCCCccccccHHHHhhcCCc-eEEEecC------CCC---CCCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQ-VLVFQFD------HTN---PPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~-~~v~~l~------~e~---~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
++|++++|+.+|++..|.+++..|... ..|+.++ .+. ...++++.+......+... ....++.++|||
T Consensus 2 G~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~lvghS 79 (258)
T d1xkla_ 2 GKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESL--SADEKVILVGHS 79 (258)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTS--CSSSCEEEEEET
T ss_pred CCcEEEECCCCCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCcchHHHHHHHhhhhhcc--cccccccccccc
Confidence 478999999999999999999999754 7888876 111 2358899998888888743 356799999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
|||.+|.++|.+... .+ .++++++..+
T Consensus 80 ~Gg~va~~~a~~~p~---~~~~lil~~~~~~ 107 (258)
T d1xkla_ 80 LGGMNLGLAMEKYPQ---KIYAAVFLAAFMP 107 (258)
T ss_dssp THHHHHHHHHHHCGG---GEEEEEEESCCCC
T ss_pred hhHHHHHHHhhhhcc---ccceEEEecccCC
Confidence 999999999886543 34 7888887544
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=98.79 E-value=4.9e-08 Score=107.97 Aligned_cols=95 Identities=19% Similarity=0.291 Sum_probs=71.3
Q ss_pred CCceeEeecCCCcccccc-HHHHhhcC-CceEEEecC----C--C-C----CCCCHHHHHHHHHHHHhhhccCCCCcEEE
Q psy1119 1156 NNNTIFMVPGIEGIATVL-EPLAKNIN-AQVLVFQFD----H--T-N----PPDTIPEMADSLLPHFKKRLVHGTDEIKL 1222 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y-~~La~~L~-~~~~v~~l~----~--e-~----~~~sieelA~~y~~~I~~~q~qp~gPy~L 1222 (1392)
+++||+++|+.+++...| ..+++.|. ..+.|+.++ + + + ..-+++++|++....++.. ...+++|
T Consensus 21 ~~p~vvl~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~d~~~ll~~l---~~~~~~l 97 (297)
T d1q0ra_ 21 ADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVAVLDGW---GVDRAHV 97 (297)
T ss_dssp TSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHHHHHHHHHHHT---TCSSEEE
T ss_pred CCCEEEEECCCCcChhHHHHHHHHHHHhCCCEEEEEeCCCCcccccccccccccccchhhhhhccccccc---cccceee
Confidence 457999999999988877 56877765 457888876 1 1 1 1238999999888777643 3568999
Q ss_pred EeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1223 VGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1223 ~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
+||||||.+|+++|.+- .+.+ .++++++.+.
T Consensus 98 vGhS~Gg~~a~~~a~~~---P~~v~~lvli~~~~~ 129 (297)
T d1q0ra_ 98 VGLSMGATITQVIALDH---HDRLSSLTMLLGGGL 129 (297)
T ss_dssp EEETHHHHHHHHHHHHC---GGGEEEEEEESCCCT
T ss_pred ccccccchhhhhhhccc---ccceeeeEEEccccc
Confidence 99999999999999853 3456 7888887554
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=98.79 E-value=4.7e-08 Score=106.21 Aligned_cols=205 Identities=15% Similarity=0.089 Sum_probs=117.2
Q ss_pred CCCCceeEeecCCCccccccHHHHhhcC-CceEEEecC------CC--CCCCCHHHHHHHHHHHHhhhccCCCCcEEEEe
Q psy1119 1154 VGNNNTIFMVPGIEGIATVLEPLAKNIN-AQVLVFQFD------HT--NPPDTIPEMADSLLPHFKKRLVHGTDEIKLVG 1224 (1392)
Q Consensus 1154 ~g~~~pLF~vp~agG~~~~y~~La~~L~-~~~~v~~l~------~e--~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G 1224 (1392)
.|+++||+|+|+.+++...|.+++..|. ....|+.++ .+ ....++++++++..+.++.. ...+..++|
T Consensus 16 ~G~g~pvvllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~lvg 92 (273)
T d1a8sa_ 16 WGSGQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLAQLIEHL---DLRDAVLFG 92 (273)
T ss_dssp ESCSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHT---TCCSEEEEE
T ss_pred ECCCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEechhcCccccccccccccchHHHHHHHHHhc---Cccceeeee
Confidence 3567899999999999999999999985 457777765 11 12358999999998888743 345788999
Q ss_pred echhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCC-----hHH-----------HHHHHHhc-C-C---cc
Q psy1119 1225 FSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPD-----WNA-----------KLNYFLDL-M-P---ED 1282 (1392)
Q Consensus 1225 ~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~-----~~~-----------~l~~~~~~-~-~---~~ 1282 (1392)
||+||.++..++.+. ....+ .++++++.|+........... ++. ....+... . . ..
T Consensus 93 ~s~gG~~~~~~~a~~--~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (273)
T d1a8sa_ 93 FSTGGGEVARYIGRH--GTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPG 170 (273)
T ss_dssp ETHHHHHHHHHHHHH--CSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTT
T ss_pred eccCCccchhhhhhh--hhhccceeEEEecccccccccccccccchhhhhhhHHHHHHHHHHHHHHHHhhhhhhhcccch
Confidence 999886665555432 23345 778888876543111111000 000 01111111 0 0 01
Q ss_pred ccCCHHHHHHHH--------HHHHHHHHhhccccCC-CCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc
Q psy1119 1283 ATHSRTYQRNLA--------HAAYKRITSILKYTDP-KHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG 1352 (1392)
Q Consensus 1283 ~~~~~~~l~~~~--------~~~~~~~~~~~~y~~~-~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G 1352 (1392)
........+... ............+... ...++++|++++.+++|. ........+.+-.....+++.+||
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (273)
T d1a8sa_ 171 AKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSG 250 (273)
T ss_dssp CCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETT
T ss_pred hhhhHHHHHHHHHhhcccchhhhhhhHHHhhhhhhhHHHHhhccceEEEecCCCCCCCHHHHHHHHHHhCCCCEEEEECC
Confidence 111222222211 1111112222222221 123678999999999987 433333333322234578899986
Q ss_pred -CccccccChHH
Q psy1119 1353 -NHFTVLDNIKS 1363 (1392)
Q Consensus 1353 -~H~~ml~~~~~ 1363 (1392)
+|+.++++|..
T Consensus 251 ~gH~~~~e~p~~ 262 (273)
T d1a8sa_ 251 APHGLTDTHKDQ 262 (273)
T ss_dssp CCSCHHHHTHHH
T ss_pred CCCchHHhCHHH
Confidence 89999998854
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=98.77 E-value=2.4e-08 Score=112.89 Aligned_cols=147 Identities=15% Similarity=0.144 Sum_probs=109.2
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
.|.+|||||+|=||..|++.|+++|...+++..|+ .+|+++.+.+..+++.-
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~------------------------~~~~~~~~~~~~~~~~~---- 53 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD------------------------ELNLLDSRAVHDFFASE---- 53 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT------------------------TCCTTCHHHHHHHHHHH----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch------------------------hccccCHHHHHHHHhhc----
Confidence 35689999999999999999999998755443332 26899999998887643
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC--------------
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA-------------- 926 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~-------------- 926 (1392)
.+|.|+|+|+........ .....+.+..|+.||.+|.+++... ....||++||.+..-+..
T Consensus 54 ~~d~v~~~a~~~~~~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~--~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~ 128 (315)
T d1e6ua_ 54 RIDQVYLAAAKVGGIVAN---NTYPADFIYQNMMIESNIIHAAHQN--DVNKLLFLGSSCIYPKLAKQPMAESELLQGTL 128 (315)
T ss_dssp CCSEEEECCCCCCCHHHH---HHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred CCCEEEEcchhccccccc---hhhHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEECCceEcCCCCCCCccCCccccCCC
Confidence 689999999765443322 2333445778999999998887654 456899999987543221
Q ss_pred --CChhHHHHHHHHHHHHHHHH-HcCCCeEEEEcccc
Q psy1119 927 --GQTNYGMANSIMERICEARR-AEGLPGLAVEWGAV 960 (1392)
Q Consensus 927 --gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~ 960 (1392)
.++.|+.+|.+.+.+++... ..|++.+.+..+.+
T Consensus 129 ~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~v 165 (315)
T d1e6ua_ 129 EPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNL 165 (315)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccE
Confidence 23569999999999998644 45999888886544
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.77 E-value=2.3e-08 Score=109.31 Aligned_cols=95 Identities=20% Similarity=0.302 Sum_probs=69.1
Q ss_pred CCceeEeecCCCccccccHHHHhhc-CCceEEEecC------CCCC---CCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNI-NAQVLVFQFD------HTNP---PDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L-~~~~~v~~l~------~e~~---~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
++++|+|+|+..|+...|......+ .....|+.++ ...+ .-+++.+++++.+.+... .+..+++|+||
T Consensus 24 ~~~~iv~lHG~~g~~~~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~ll~~l--~~~~~~~lvGh 101 (290)
T d1mtza_ 24 EKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKL--FGNEKVFLMGS 101 (290)
T ss_dssp CSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHHHHHHHHHHH--HTTCCEEEEEE
T ss_pred CCCeEEEECCCCCchHHHHHHHHHHHHCCCEEEEEeCCCCccccccccccccccchhhhhhhhhccc--ccccccceecc
Confidence 3478999999988887777655555 4568888876 1212 247899998877666533 24568999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
||||.+|..+|.+-. ..+ .++++++.+
T Consensus 102 S~Gg~ia~~~a~~~p---~~v~~lvl~~~~~ 129 (290)
T d1mtza_ 102 SYGGALALAYAVKYQ---DHLKGLIVSGGLS 129 (290)
T ss_dssp THHHHHHHHHHHHHG---GGEEEEEEESCCS
T ss_pred cccchhhhhhhhcCh---hhheeeeeccccc
Confidence 999999999998654 335 777777654
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=98.73 E-value=5.6e-09 Score=111.90 Aligned_cols=93 Identities=20% Similarity=0.169 Sum_probs=73.1
Q ss_pred eeEeecCCCccccccHHHHhhcCC-ceEEEecC------CCC---CCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechh
Q psy1119 1159 TIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD------HTN---PPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFG 1228 (1392)
Q Consensus 1159 pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~------~e~---~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~G 1228 (1392)
-.++||+.++++++|.++++.|.. ...|+.++ ... ...++++.++...+.+... ....|++|+|||||
T Consensus 4 ~~vliHG~~~~~~~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~lvGhS~G 81 (256)
T d3c70a1 4 HFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEAL--PPGEKVILVGESCG 81 (256)
T ss_dssp EEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHHS--CTTCCEEEEEETTH
T ss_pred cEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhhhh--ccccceeecccchH
Confidence 357899999999999999999975 47888875 111 2358999999988887643 35678999999999
Q ss_pred HHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1229 GMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1229 g~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
|.+|.++|.+... .+ .++++|+..+
T Consensus 82 g~ia~~~a~~~p~---~v~~lvl~~~~~~ 107 (256)
T d3c70a1 82 GLNIAIAADKYCE---KIAAAVFHNSVLP 107 (256)
T ss_dssp HHHHHHHHHHHGG---GEEEEEEESCCCC
T ss_pred HHHHHHHhhcCch---hhhhhheeccccC
Confidence 9999999887643 35 7888887544
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=98.71 E-value=1e-07 Score=108.36 Aligned_cols=157 Identities=18% Similarity=0.207 Sum_probs=109.5
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
.+|||||+|=||..+++.|.++|.+ |+.+.+-.... ....+..+... .++.++.+|+++.+.+.++++.. ++
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~-V~~id~~~~~~--~~~~~~~~~~~-~~~~~i~~Di~~~~~l~~~~~~~----~~ 73 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGID-LIVFDNLSRKG--ATDNLHWLSSL-GNFEFVHGDIRNKNDVTRLITKY----MP 73 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCCSTT--HHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHH----CC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCE-EEEEECCCccc--chhHHHHhhcc-CCcEEEEcccCCHHHHHHHHHhc----CC
Confidence 4799999999999999999999997 44443211111 11223333332 35677899999999999988765 58
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC----------------
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA---------------- 926 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~---------------- 926 (1392)
|.|||+|+..... ...++....+++|+.||.||.+++... ....+|++||.+...+.+
T Consensus 74 d~Vih~aa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~~~~--~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~ 147 (338)
T d1orra_ 74 DSCFHLAGQVAMT----TSIDNPCMDFEINVGGTLNLLEAVRQY--NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVD 147 (338)
T ss_dssp SEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETT
T ss_pred ceEEeeccccccc----ccccChHHHHHHHHHHHHHHHHhhhcc--cccccccccccccccccccccccccccccccccc
Confidence 9999999864321 122344678889999999999887654 445667777766554432
Q ss_pred ------------CChhHHHHHHHHHHHHHHHHH-cCCCeE
Q psy1119 927 ------------GQTNYGMANSIMERICEARRA-EGLPGL 953 (1392)
Q Consensus 927 ------------gq~~Yaaana~ld~la~~r~~-~Glp~~ 953 (1392)
....|+.+|...+.++..... .+....
T Consensus 148 ~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~ 187 (338)
T d1orra_ 148 KPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTV 187 (338)
T ss_dssp CTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred cccCcccCCccccccccccccchhhhhhhhhhhccCcccc
Confidence 357899999999988776543 355543
|
| >d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=98.71 E-value=4.4e-08 Score=97.47 Aligned_cols=114 Identities=11% Similarity=0.112 Sum_probs=81.7
Q ss_pred CCceEEeCCCCcccccccCCCCCCeEEEEEEEEecChhhHHHhcCCCChhhhhhhccccccccceeeEEEEe-------e
Q psy1119 434 SSLTWEQGPVNMKTWKKYSKDNINHDIAQIYYSSINFRDIMLTTAKLAPEVIESRRLYQHCVIGFEYSGRLR-------D 506 (1392)
Q Consensus 434 ~~l~~~~~~~~~~~~~~~~~~~~~evlV~V~a~gln~~Dv~~~~G~~~~~~~~~~~~~~p~~lG~E~sGvV~-------~ 506 (1392)
+.+++.+.+.|. +++|||+||+.|.|+++.--.. +..++ ..-+++.+.+|+|+ +
T Consensus 20 ~~f~l~e~~ip~--------~~~gevLvk~~~~svDp~~R~~-~~~~~----------~g~~~~g~~vg~Vv~S~~~~f~ 80 (147)
T d1v3va1 20 SDFELKTVELPP--------LKNGEVLLEALFLSVDPYMRIA-SKRLK----------EGAVMMGQQVARVVESKNSAFP 80 (147)
T ss_dssp GGEEEEEEECCC--------CCTTCEEEEEEEEECCTHHHHH-GGGSC----------TTSBCCCCEEEEEEEESCTTSC
T ss_pred cceEEEEEECCC--------CCCCEEEEEEEEEeEccccccc-ccccc----------cCCccccceEEEEEEeCCCccc
Confidence 468999988886 7999999999999998742211 11111 11244557788776 5
Q ss_pred CCCeEEEeecCCcccceEEecccceEEcCCCCCHh-----hHhhhhHHHHHHHH-HHHHhcCCCCCCEEEE
Q psy1119 507 SGKRVMGLTSGRSLANCCETDVEMAWEIPDQWTLE-----DAATVPCVYATAVY-AMFICGQMQKGESILI 571 (1392)
Q Consensus 507 vGdrV~gl~~~g~~a~~v~~~~~~~~~iPd~ls~e-----~AA~lp~~~~TA~~-aL~~~a~l~~GetVLI 571 (1392)
+||+|+|. ++|++|+++++..+.++|+.++.. ..+++....+|||| +|.. .-++||+|++
T Consensus 81 ~GD~V~g~---~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~~--~~k~Getvv~ 146 (147)
T d1v3va1 81 AGSIVLAQ---SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEMLN--GANLGKAVVT 146 (147)
T ss_dssp TTCEEEEC---CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHHHT--TCCSSEEEEE
T ss_pred CCCEEEEc---cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHhhC--CCCCCCEEEe
Confidence 89999985 579999999999999998765433 34556666777544 6644 4567999997
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=98.67 E-value=1.5e-07 Score=102.32 Aligned_cols=201 Identities=14% Similarity=0.081 Sum_probs=114.7
Q ss_pred CCceeEeecCCCccccccHHHHhhc-CCceEEEecC--------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNI-NAQVLVFQFD--------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L-~~~~~v~~l~--------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
+++||+|+|+.+++...|..++..| .....|+.++ ......+++++++++.+.++.. ..++.+++|||
T Consensus 20 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~~vg~s 96 (275)
T d1a88a_ 20 DGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAADVAALTEAL---DLRGAVHIGHS 96 (275)
T ss_dssp TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH---TCCSEEEEEET
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEecccccccccccccccccccccccccccccc---ccccccccccc
Confidence 3479999999999999999999988 4557788875 1123358999999998888744 23456777777
Q ss_pred h-hHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCC-----hHHHH-----------HHHH-hcC----Cccc
Q psy1119 1227 F-GGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPD-----WNAKL-----------NYFL-DLM----PEDA 1283 (1392)
Q Consensus 1227 ~-Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~-----~~~~l-----------~~~~-~~~----~~~~ 1283 (1392)
+ ||.+|..+|.+- -+.+ .++++++.++........... +.... .... ... ....
T Consensus 97 ~~G~~~~~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (275)
T d1a88a_ 97 TGGGEVARYVARAE---PGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGA 173 (275)
T ss_dssp HHHHHHHHHHHHSC---TTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTC
T ss_pred ccccchhhcccccC---cchhhhhhhhcccccccccchhhhhhhhhhhhhhhhhhhhhhhHHHHHhhhhhhhhhcccchh
Confidence 5 788888887542 2335 788998876543111111100 11110 0000 001 0111
Q ss_pred cCCHHHHHHHH--------HHHHHHHHhhccccCC-CCCcccceEEEEeeCCCC-CCChhh-cCcccccCCCeEEEEEcc
Q psy1119 1284 THSRTYQRNLA--------HAAYKRITSILKYTDP-KHKAFGGNITLLRPTEQA-LPTAED-YGLSKVCKKPVKVHFVDG 1352 (1392)
Q Consensus 1284 ~~~~~~l~~~~--------~~~~~~~~~~~~y~~~-~~~~~~~pi~l~~a~~~~-~~~~~~-~~W~~~~~g~v~v~~v~G 1352 (1392)
........... ...+............ ....+++|++++.+++|. ...... ..+.+.. ...+++.++|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~ 252 (275)
T d1a88a_ 174 TVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELL-ANATLKSYEG 252 (275)
T ss_dssp CCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHS-TTEEEEEETT
T ss_pred hHHHHHHHHHHHhhcccchHHHHHHHHHhhhhhhhHHHHhhccccceeecCCCCCcCHHHHHHHHHHhC-CCCEEEEECC
Confidence 11222222111 1111111222221111 123578999999999887 433332 2334444 3578999995
Q ss_pred -CccccccChHH
Q psy1119 1353 -NHFTVLDNIKS 1363 (1392)
Q Consensus 1353 -~H~~ml~~~~~ 1363 (1392)
+|+.++++|+.
T Consensus 253 ~gH~~~~e~p~~ 264 (275)
T d1a88a_ 253 LPHGMLSTHPEV 264 (275)
T ss_dssp CCTTHHHHCHHH
T ss_pred CCCchHHhCHHH
Confidence 89999998864
|
| >d2jq4a1 a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Hypothetical protein Atu2571 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.67 E-value=1.4e-08 Score=90.96 Aligned_cols=70 Identities=16% Similarity=0.251 Sum_probs=61.2
Q ss_pred chHHHHHHHHhCCC-CCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-c--cCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGLR-DLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-R--GLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~-~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~--~~ti~~La~~~~~~ 1089 (1392)
+.+.+.+++++++. ++++|+++++|+++|+|||++++|..+|+++||+.+|..++ . .+|++.|++++...
T Consensus 3 e~i~~il~~~~~l~~~~~~i~~~~~f~dlG~DSl~~~~l~~~le~~f~v~i~~~~l~~~~~~Ti~~la~~i~~~ 76 (83)
T d2jq4a1 3 ATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKLI 76 (83)
T ss_dssp HHHHHHHHHTSCCSSCGGGCCTTSCGGGGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCHHHcCCCCCHHHHhCccHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhHHHHHHHHHHH
Confidence 45788899987642 56889999999999999999999999999999999999998 3 38999999988764
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=98.65 E-value=2.5e-07 Score=99.86 Aligned_cols=211 Identities=13% Similarity=0.098 Sum_probs=116.1
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCC-ceEEEecC--------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD--------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~--------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
|+++||+|+|+.+|+...|..+++.|.. ...|+.++ ......+++++++.+.+.++.. ..++..++||
T Consensus 17 G~g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~vg~ 93 (271)
T d1va4a_ 17 GSGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEHL---DLKEVTLVGF 93 (271)
T ss_dssp SSSSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH---TCCSEEEEEE
T ss_pred cCCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccccccccccccccccceeeeeec---CCCcceeecc
Confidence 5568999999999999999999999954 57788775 1122458999999888777643 3457889999
Q ss_pred chhHHHHHH-HHHHHHHcCCcc-EEEEEeCCCCCCccc--cCCCCChH---HH-----------HHHHHh---cCCcccc
Q psy1119 1226 SFGGMVALE-LAIKLEQLGTKC-HLYLVDSAPDYVLTS--LRKLPDWN---AK-----------LNYFLD---LMPEDAT 1284 (1392)
Q Consensus 1226 S~Gg~VA~E-mA~~Le~~G~~v-~LvLiD~~p~~~~~~--l~~~~~~~---~~-----------l~~~~~---~~~~~~~ 1284 (1392)
|+||.++.. +|++ .-+.+ .++++++.++..... ........ .. +..+.. .......
T Consensus 94 s~gG~~~~~~~a~~---~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (271)
T d1va4a_ 94 SMGGGDVARYIARH---GSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQV 170 (271)
T ss_dssp TTHHHHHHHHHHHH---CSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCC
T ss_pred cccccccccccccc---ccceeeEEEeecccccccccchhhhhhhhhhHHHHHHHHhhhhhhhhhhhhcchhhcccchhh
Confidence 998866544 4432 22344 777887755432111 11100000 00 000000 0001111
Q ss_pred CCHHHHHHH--------HHHHHHHHHhhccccCC-CCCcccceEEEEeeCCCC-CCChhhcC-cccccCCCeEEEEEcc-
Q psy1119 1285 HSRTYQRNL--------AHAAYKRITSILKYTDP-KHKAFGGNITLLRPTEQA-LPTAEDYG-LSKVCKKPVKVHFVDG- 1352 (1392)
Q Consensus 1285 ~~~~~l~~~--------~~~~~~~~~~~~~y~~~-~~~~~~~pi~l~~a~~~~-~~~~~~~~-W~~~~~g~v~v~~v~G- 1352 (1392)
......... .......+.....+... ..+++++|++++.+++|. ........ ++++.. ..+++.+||
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 249 (271)
T d1va4a_ 171 VSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIK-GAELKVYKDA 249 (271)
T ss_dssp CCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCGGGTHHHHHHHST-TCEEEEETTC
T ss_pred hhhhHHHHHHhhhhhhhhhhhhhcccccchhhhhhhhhhcccceeecccCCCCCCCHHHHHHHHHHhCC-CCEEEEECCC
Confidence 111111111 11111122222222211 123578999999999887 33332222 344433 478889985
Q ss_pred CccccccChHHHHHHHhhhccc
Q psy1119 1353 NHFTVLDNIKSAQIIMHEDSTD 1374 (1392)
Q Consensus 1353 ~H~~ml~~~~~~~i~~~l~~~L 1374 (1392)
+|+.++++|+. .+..+.+.|
T Consensus 250 gH~~~~e~p~~--~~~~i~~fL 269 (271)
T d1va4a_ 250 PHGFAVTHAQQ--LNEDLLAFL 269 (271)
T ss_dssp CTTHHHHTHHH--HHHHHHHHH
T ss_pred CCchHHhCHHH--HHHHHHHHH
Confidence 89999988753 334444444
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.64 E-value=1.3e-07 Score=100.11 Aligned_cols=148 Identities=16% Similarity=0.073 Sum_probs=102.4
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
.+.++||||+|.||.++++.|.++|.+ |.++.|+..+.. .....+ +.++.+|++|.+++.++++
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~-V~~~~R~~~~~~-------~~~~~~--~~~~~gD~~d~~~l~~al~------ 66 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGYE-VTVLVRDSSRLP-------SEGPRP--AHVVVGDVLQAADVDKTVA------ 66 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCGGGSC-------SSSCCC--SEEEESCTTSHHHHHHHHT------
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCE-EEEEEcChhhcc-------cccccc--cccccccccchhhHHHHhc------
Confidence 367999999999999999999999986 888888754321 112233 5568899999998877654
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC----ChhHHHHHH
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG----QTNYGMANS 936 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g----q~~Yaaana 936 (1392)
..|.|||++|...+.... .....++.++.++.+.. ...+||++||......... ...|...+.
T Consensus 67 ~~d~vi~~~g~~~~~~~~-----------~~~~~~~~~l~~aa~~~--~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~ 133 (205)
T d1hdoa_ 67 GQDAVIVLLGTRNDLSPT-----------TVMSEGARNIVAAMKAH--GVDKVVACTSAFLLWDPTKVPPRLQAVTDDHI 133 (205)
T ss_dssp TCSEEEECCCCTTCCSCC-----------CHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCTTCSCGGGHHHHHHHH
T ss_pred CCCEEEEEeccCCchhhh-----------hhhHHHHHHHHHHHHhc--CCCeEEEEeeeeccCCCccccccccccchHHH
Confidence 579999999875432221 12345777777776654 5578999998765433222 235666666
Q ss_pred HHHHHHHHHHHcCCCeEEEEcccc
Q psy1119 937 IMERICEARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~Glp~~ai~~g~~ 960 (1392)
..+.+ .+..|++.+.|..|.+
T Consensus 134 ~~e~~---l~~~~~~~tiirp~~~ 154 (205)
T d1hdoa_ 134 RMHKV---LRESGLKYVAVMPPHI 154 (205)
T ss_dssp HHHHH---HHHTCSEEEEECCSEE
T ss_pred HHHHH---HHhcCCceEEEeccee
Confidence 66654 4467888777765544
|
| >d1vkua_ a.28.1.1 (A:) Acyl carrier protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Thermotoga maritima [TaxId: 2336]
Probab=98.64 E-value=1.8e-08 Score=90.86 Aligned_cols=69 Identities=28% Similarity=0.431 Sum_probs=63.7
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
+.+.+.++++|++ ++++|+++.+|++||+|||++++|...|+++||+.+|..++ ..+|+++|++++...
T Consensus 11 ~~l~~iv~~~l~~-~~~~i~~~~~~~dlG~DSl~~v~l~~~ie~~f~i~i~~~~~~~~~Tv~~l~~~i~~~ 80 (85)
T d1vkua_ 11 AKFVEIASEKMGK-DLETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKK 80 (85)
T ss_dssp HHHHHHHHHTTCC-CCCSCCTTSBTTTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCC-CHHHCCCCCCHHHhcCcchHHHHHHHHHHHHccCCCCHHHHHHcCCHHHHHHHHHHH
Confidence 4678899999998 56899999999999999999999999999999999999999 889999999988754
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.64 E-value=1.5e-07 Score=107.73 Aligned_cols=168 Identities=17% Similarity=0.077 Sum_probs=114.7
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCccc--HHHHHHHHHH-hcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKN--GYQALRIKIW-KSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~--~~~~~~~~~l-~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
|++|||||+|=||..+++.|.++|.+ |+.++|..... .......... ......+.++.+|++|.+.+.+++...
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~~-V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 78 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGYE-VHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-- 78 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcCE-EEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc--
Confidence 44599999999999999999999997 66667753211 1000000110 111246789999999999999988765
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhC-CCCCeEEEecccccccCCC-----------
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMC-PTLGQFVVFSSVSCGRGNA----------- 926 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~-~~l~~fV~~SS~s~~~G~~----------- 926 (1392)
..+.++|+|+..... .+.+.....+++|+.|+.+|.++++... .+..+||+.||.+. .|.+
T Consensus 79 --~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~v-yg~~~~~~~~E~~~~ 151 (347)
T d1t2aa_ 79 --KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSEL-YGKVQEIPQKETTPF 151 (347)
T ss_dssp --CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG-TCSCSSSSBCTTSCC
T ss_pred --ccceeeeeeeccccc----hhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchhe-ecCCCCCCCCCCCCC
Confidence 567788888753221 1233445567899999999999887653 23357999988653 3321
Q ss_pred -CChhHHHHHHHHHHHHHHH-HHcCCCeEEEEccc
Q psy1119 927 -GQTNYGMANSIMERICEAR-RAEGLPGLAVEWGA 959 (1392)
Q Consensus 927 -gq~~Yaaana~ld~la~~r-~~~Glp~~ai~~g~ 959 (1392)
.+..|+.+|.+.|.++... ++.|++.+.+..+.
T Consensus 152 ~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~ 186 (347)
T d1t2aa_ 152 YPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFN 186 (347)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 2457999999999998864 55689988777654
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=98.63 E-value=6.3e-08 Score=111.93 Aligned_cols=167 Identities=14% Similarity=0.142 Sum_probs=116.5
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
.+|||||+|=||..|+++|+++|...++.+.+...... . ..+..+.. ..++..+.+|++|.+.+..+++.. .+
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~-~-~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~~~----~~ 74 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-L-ESLSDISE-SNRYNFEHADICDSAEITRIFEQY----QP 74 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC-G-GGGTTTTT-CTTEEEEECCTTCHHHHHHHHHHH----CC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc-H-HHHHhhhh-cCCcEEEEccCCCHHHHHHHHHhC----CC
Confidence 47999999999999999999999986666554221110 0 01111211 235778899999999999888764 68
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCC-------CCeEEEecccccccCC----------
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPT-------LGQFVVFSSVSCGRGN---------- 925 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~-------l~~fV~~SS~s~~~G~---------- 925 (1392)
|.|||+|+..... .+.++-..++++|+.|+.++.+++...... ...||+.||.+..-..
T Consensus 75 d~VihlAa~~~~~----~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~ 150 (361)
T d1kewa_ 75 DAVMHLAAESHVD----RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV 150 (361)
T ss_dssp SEEEECCSCCCHH----HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred CEEEECccccchh----hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccccc
Confidence 9999999853321 122334568899999999998887543211 2479999997644211
Q ss_pred -----------CCChhHHHHHHHHHHHHHHHH-HcCCCeEEEEcccc
Q psy1119 926 -----------AGQTNYGMANSIMERICEARR-AEGLPGLAVEWGAV 960 (1392)
Q Consensus 926 -----------~gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~ 960 (1392)
...+.|+.+|...+.++...+ ..|++.+.+..+.+
T Consensus 151 ~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~v 197 (361)
T d1kewa_ 151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNN 197 (361)
T ss_dssp CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEE
T ss_pred CCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCce
Confidence 123559999999999998644 44999888887664
|
| >d2af8a_ a.28.1.1 (A:) Actinorhodin polyketide synthase acyl carrier protein, ACT ACP {Streptomyces coelicolor, A3(2) [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Actinorhodin polyketide synthase acyl carrier protein, ACT ACP species: Streptomyces coelicolor, A3(2) [TaxId: 1902]
Probab=98.62 E-value=7.7e-09 Score=93.33 Aligned_cols=68 Identities=24% Similarity=0.271 Sum_probs=58.7
Q ss_pred hHHHHHHH----HhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1021 NIVDAVIN----ILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1021 ~l~~~~a~----~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
.+.+.+.+ .+|+ ++++++.+.+|.+||+|||+++++.++|+++||+.+|...+ .++|+++|++++...
T Consensus 9 ~l~~~l~e~~~~~~g~-~~~~i~~d~~f~dlG~DSl~~~~l~~~l~~~~g~~l~~~~~~~~~Tv~~l~~~i~~~ 81 (86)
T d2af8a_ 9 DLRRALVECAGETDGT-DLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGA 81 (86)
T ss_dssp HHHHHHHHTTCCCSCC-CCSSCSCSSSHHHHTCSSHHHHHHHHHHHHHHTCCCCCSTTTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccccCC-CccccccCCCHHHcCCCHHHHHHHHHHHHHHHccCcCHHHHHcCCCHHHHHHHHHHH
Confidence 44555555 4565 56889999999999999999999999999999999999998 899999999988754
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.62 E-value=2.5e-07 Score=105.73 Aligned_cols=167 Identities=14% Similarity=0.085 Sum_probs=117.5
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHh--cCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK--SYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~--~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
-|+.|||||+|-||..++++|.++|.+ |+.+.|..............+. .....+.++.+|..|........
T Consensus 16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~----- 89 (341)
T d1sb8a_ 16 PKVWLITGVAGFIGSNLLETLLKLDQK-VVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC----- 89 (341)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH-----
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcCE-EEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc-----
Confidence 378999999999999999999999997 5556553222222111111111 11235788999999988655332
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC-----------C
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA-----------G 927 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~-----------g 927 (1392)
...+.++|.|+.... ..+.++....+..|+.|+.+|-+++... +...||+.||.+..-..+ .
T Consensus 90 -~~~~~v~~~~a~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p 162 (341)
T d1sb8a_ 90 -AGVDYVLHQAALGSV----PRSINDPITSNATNIDGFLNMLIAARDA--KVQSFTYAASSSTYGDHPGLPKVEDTIGKP 162 (341)
T ss_dssp -TTCSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTCCCSSBCTTCCCCC
T ss_pred -ccccccccccccccc----cccccCccchhheeehhHHHHHHHHHhc--CCceEEEcccceeeCCCCCCCccCCCCCCC
Confidence 357888888864322 1145667778999999999999888764 456899999987543222 2
Q ss_pred ChhHHHHHHHHHHHHHHHH-HcCCCeEEEEcccc
Q psy1119 928 QTNYGMANSIMERICEARR-AEGLPGLAVEWGAV 960 (1392)
Q Consensus 928 q~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~ 960 (1392)
.+.|+.+|...+.+++... ..|++.+.+..+.+
T Consensus 163 ~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v 196 (341)
T d1sb8a_ 163 LSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNV 196 (341)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCE
T ss_pred CCcchHHHHHHHHHHHHHHHHhCCCeEEEEecee
Confidence 3899999999999987654 44899998887754
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=98.62 E-value=1.4e-07 Score=100.52 Aligned_cols=85 Identities=16% Similarity=0.205 Sum_probs=58.0
Q ss_pred CCCCceeEeecCCCccccccHHHHhhcCC-ceEEEecC----C-CCC--CCC--HHHHHHHHHHHHhhhccCCCCcEEEE
Q psy1119 1154 VGNNNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD----H-TNP--PDT--IPEMADSLLPHFKKRLVHGTDEIKLV 1223 (1392)
Q Consensus 1154 ~g~~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~----~-e~~--~~s--ieelA~~y~~~I~~~q~qp~gPy~L~ 1223 (1392)
++.+|+|+|+|+.+|+...|.++++.|.. ...|+.++ + ... ..+ ....+...+..+. .....|+.|+
T Consensus 13 ~~~~P~ivllHG~~~~~~~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~lv 89 (264)
T d1r3da_ 13 TARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQAH---VTSEVPVILV 89 (264)
T ss_dssp BTTBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC-------CHHHHHHHHHHHTT---CCTTSEEEEE
T ss_pred CCCCCeEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEecccccccccccccccchhhhhhhhccccc---ccccCceeee
Confidence 44557899999999999999999999964 58888876 1 111 111 2222222222222 2356799999
Q ss_pred eechhHHHHHHHHHHHHH
Q psy1119 1224 GFSFGGMVALELAIKLEQ 1241 (1392)
Q Consensus 1224 G~S~Gg~VA~EmA~~Le~ 1241 (1392)
||||||.+|..+|.+...
T Consensus 90 GhS~Gg~ia~~~a~~~~~ 107 (264)
T d1r3da_ 90 GYSLGGRLIMHGLAQGAF 107 (264)
T ss_dssp EETHHHHHHHHHHHHTTT
T ss_pred eecchHHHHHHHHHhCch
Confidence 999999999998876543
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.61 E-value=1.9e-07 Score=105.61 Aligned_cols=164 Identities=16% Similarity=0.079 Sum_probs=114.3
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
|++|||||+|=||..+++.|.++|.+ |+.+.|....... ..++.+.. ..++.++.+|++|.+.+.+++... .
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~-V~~~~r~~~~~~~--~~l~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~----~ 72 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYR-VHGLVARRSSDTR--WRLRELGI-EGDIQYEDGDMADACSVQRAVIKA----Q 72 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCCSSCCC--HHHHHTTC-GGGEEEEECCTTCHHHHHHHHHHH----C
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCE-EEEEECCCCcccH--HHHHHhcc-cCCcEEEEccccChHHhhhhhccc----c
Confidence 68999999999999999999999998 6666665432211 12233322 235788999999999999888765 4
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC------------CCCh
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN------------AGQT 929 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~------------~gq~ 929 (1392)
.+.++|+|+........ ++....+..++.|+.++-+++.... ...+|++.||.+ ..|. ..+.
T Consensus 73 ~~~~~~~a~~~~~~~~~----~~~~~~~~~n~~g~~~~l~~~~~~~-~~~~~i~~Ss~~-~~~~~~~~~~~E~~~~~p~~ 146 (321)
T d1rpna_ 73 PQEVYNLAAQSFVGASW----NQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSE-MFGLIQAERQDENTPFYPRS 146 (321)
T ss_dssp CSEEEECCSCCCHHHHT----TSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGG-GGCSCSSSSBCTTSCCCCCS
T ss_pred ccccccccccccccccc----cchHHHHhhhhhchHHHHHHHHHhC-CCcccccccchh-hcCcccCCCCCCCCCccccC
Confidence 56788888654322211 2235678899999999988876541 224555555543 3322 1457
Q ss_pred hHHHHHHHHHHHHHH-HHHcCCCeEEEEccc
Q psy1119 930 NYGMANSIMERICEA-RRAEGLPGLAVEWGA 959 (1392)
Q Consensus 930 ~Yaaana~ld~la~~-r~~~Glp~~ai~~g~ 959 (1392)
.|+.+|.+.+.+++. ++..|++...+-.+.
T Consensus 147 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~ 177 (321)
T d1rpna_ 147 PYGVAKLYGHWITVNYRESFGLHASSGILFN 177 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
T ss_pred hhHHHHHHHHHHHHHHHhhcCCcEEEEEEec
Confidence 899999999999885 556699988777654
|
| >d1or5a_ a.28.1.1 (A:) Frenolicin polyketide synthase acyl carrier protein, Fren ACP {Streptomyces roseofulvus [TaxId: 33902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Frenolicin polyketide synthase acyl carrier protein, Fren ACP species: Streptomyces roseofulvus [TaxId: 33902]
Probab=98.60 E-value=2e-08 Score=89.49 Aligned_cols=71 Identities=21% Similarity=0.269 Sum_probs=60.6
Q ss_pred chHHHHHHHHhCCCCC--cccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhccc
Q psy1119 1020 TNIVDAVINILGLRDL--KTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSFE 1090 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~--~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~~ 1090 (1392)
+.|.+.+++.+|.... .+++.+.+|++||+|||+++||+++|+++||+.+|...+ .++|+++|++++....
T Consensus 6 e~l~~il~e~~g~~~~~~~~~d~d~~f~dlG~DSl~~~el~~~le~~~g~~l~~~~~~~~~Ti~~l~~~v~~~~ 79 (82)
T d1or5a_ 6 DDLKKLLAETAGEDDSVDLAGELDTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTTP 79 (82)
T ss_dssp HHHHHHHHHHSCCCSSCCGGGCSSSCHHHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTCC
T ss_pred HHHHHHHHHHhCCCcccccCCCcCcCHHHcCCChHhHHHHHHHHHHHHhCcCCHHHHHcCCCHHHHHHHHHhcc
Confidence 4678888888885321 136778899999999999999999999999999999998 8999999999987653
|
| >d1nq4a_ a.28.1.1 (A:) Oxytetracycline polyketide synthase acyl carrier {Streptomyces rimosus [TaxId: 1927]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Oxytetracycline polyketide synthase acyl carrier species: Streptomyces rimosus [TaxId: 1927]
Probab=98.58 E-value=1.6e-08 Score=92.97 Aligned_cols=67 Identities=18% Similarity=0.228 Sum_probs=58.5
Q ss_pred HHHHHHHHhCCCCCcccCcCcchhhcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhcc
Q psy1119 1022 IVDAVINILGLRDLKTVSLHSTLAELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1022 l~~~~a~~l~~~~~~~i~~~~~l~~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~ 1089 (1392)
+.+.+++.+++ +++++..+.+|++||+|||++++|.++|+++||+.++...+ .++|+++|++++...
T Consensus 13 lre~~~~~~~~-~~~~i~~d~~f~dlG~DSl~~~el~~~le~~~gv~l~~~~~~~~~Ti~~l~~~l~~~ 80 (95)
T d1nq4a_ 13 LRECAGEEESI-DLGGDVEDVAFDALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNAS 80 (95)
T ss_dssp HHHHHTCSSTT-CSCSCCSSSCHHHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHH
T ss_pred HHHHHhHHhCC-ChhhcccCCCHHHcCCcHHHHHHHHHHHHHHhcCCCCHHHHhcCCCHHHHHHHHHHh
Confidence 34445555666 56889999999999999999999999999999999999998 899999999988764
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=98.57 E-value=9.2e-08 Score=109.58 Aligned_cols=161 Identities=16% Similarity=0.093 Sum_probs=110.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
+++++|||||+|=||..+++.|.++|.+ |+.+.|+..+....... ......+-....+.+|+++.+.+..++
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~-V~~~vR~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~------ 81 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEHGYK-VRGTARSASKLANLQKR-WDAKYPGRFETAVVEDMLKQGAYDEVI------ 81 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHH-HHHHSTTTEEEEECSCTTSTTTTTTTT------
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHCcCE-EEEEeCCchhHHHHHHh-hhccccccccEEEeccccchhhhhhhc------
Confidence 5899999999999999999999999997 66677874322222211 122233444566789999988765544
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC------------
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG------------ 927 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g------------ 927 (1392)
..++.|+|+|+.... ..+ ....+.+++.|+.++-+++... .....||++||+++..+...
T Consensus 82 ~~~~~v~~~a~~~~~----~~~---~~~~~~~nv~gt~~ll~~~~~~-~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~ 153 (342)
T d1y1pa1 82 KGAAGVAHIASVVSF----SNK---YDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVSALIPKPNVEGIYLDEKSW 153 (342)
T ss_dssp TTCSEEEECCCCCSC----CSC---HHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGGTCCCCTTCCCCEECTTCC
T ss_pred ccchhhhhhcccccc----ccc---ccccccchhhhHHHHHHhhhcc-cccccccccccceeeccCCCCCCCcccccccc
Confidence 368999999986542 223 3455678999999998877543 34678999999865443211
Q ss_pred -------------------ChhHHHHHHHHHHHHHHHHHc-C--CCeEEEE
Q psy1119 928 -------------------QTNYGMANSIMERICEARRAE-G--LPGLAVE 956 (1392)
Q Consensus 928 -------------------q~~Yaaana~ld~la~~r~~~-G--lp~~ai~ 956 (1392)
...|+++|...+.++....+. + +...++.
T Consensus 154 ~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~ 204 (342)
T d1y1pa1 154 NLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVL 204 (342)
T ss_dssp CHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEE
T ss_pred ccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceec
Confidence 135999999999888644333 3 3345554
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=98.53 E-value=5.2e-08 Score=108.91 Aligned_cols=93 Identities=16% Similarity=0.234 Sum_probs=71.7
Q ss_pred CceeEeecCCCccccccHHHHhhcCC-ceEEEecC------CCCC----CCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD------HTNP----PDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~------~e~~----~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
.+.|+|+|+.+++...|..+...|.. ...|+.++ ...+ ..+++.+++.+.+.++.. ..+|++|+||
T Consensus 47 ~p~llllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~lvGh 123 (310)
T d1b6ga_ 47 EDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERL---DLRNITLVVQ 123 (310)
T ss_dssp SCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHHH---TCCSEEEEEC
T ss_pred CCEEEEECCCCCchHHHHHHHHHhhccCceEEEeeecCccccccccccccccccccccchhhhhhhc---cccccccccc
Confidence 35678999999999999999888864 46677775 1211 238999999998888744 4578999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
||||.+|+.+|.+-- +.+ +|+++|+..
T Consensus 124 S~Gg~ia~~~A~~~P---~~V~~lvl~~~~~ 151 (310)
T d1b6ga_ 124 DWGGFLGLTLPMADP---SRFKRLIIMNACL 151 (310)
T ss_dssp THHHHHHTTSGGGSG---GGEEEEEEESCCC
T ss_pred eecccccccchhhhc---cccceEEEEcCcc
Confidence 999999999996532 346 889998754
|
| >d1f80d_ a.28.1.1 (D:) Acyl carrier protein {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Bacillus subtilis [TaxId: 1423]
Probab=98.52 E-value=5.5e-08 Score=84.96 Aligned_cols=66 Identities=24% Similarity=0.435 Sum_probs=60.4
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchh-hcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHH
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLA-ELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIA 1086 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~-~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~ 1086 (1392)
+.+.+.+++.|++ ++++|+++.+|. +||+|||++++|...|+++||+.+|..++ ..+|++++++++
T Consensus 6 ~~v~~iia~~l~~-~~~~i~~~~~~~~DlG~DSl~~vel~~~le~~f~i~i~~~~~~~~~Tv~~l~~~i 73 (74)
T d1f80d_ 6 ERVTKIIVDRLGV-DEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYI 73 (74)
T ss_dssp HHHHHHHHHHSSC-CSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHC
T ss_pred HHHHHHHHHHHCc-CHHHcCCCccHHHhcCccHhHHHHHHHHHHHHhCCCCCHHHHhcCCCHHHHHHHH
Confidence 4578899999998 558999999997 69999999999999999999999999999 789999999875
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.50 E-value=8.3e-07 Score=101.41 Aligned_cols=165 Identities=13% Similarity=0.111 Sum_probs=115.2
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEec------CCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTS------RSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~s------Rs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
|.+|||||+|=||.+|+++|+++|.. |+.+. |+..........++.+. +-++.++.+|++|.+.+++++..
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~-V~~ld~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~ 79 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYL-PVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRLFKK 79 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCC-EEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHH
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCE-EEEEECCCccccccccchHHHHHHHHhc--CCCcEEEEeeccccccccccccc
Confidence 56899999999999999999999987 44442 22222223333344443 34577889999999999887765
Q ss_pred HhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccC-----------
Q psy1119 856 ANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRG----------- 924 (1392)
Q Consensus 856 ~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G----------- 924 (1392)
..++.++|+|+..... .+.++....++.|+.|+.++.+++... ....||++||....-.
T Consensus 80 ----~~~~~i~h~Aa~~~~~----~~~~~p~~~~~~Nv~gt~~l~~~~~~~--~v~~~i~~ss~~~~~~~~~~~~~~~~~ 149 (346)
T d1ek6a_ 80 ----YSFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMKAH--GVKNLVFSSSATVYGNPQYLPLDEAHP 149 (346)
T ss_dssp ----CCEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred ----cccccccccccccCcH----hhHhCHHHHHHhhhcccccccchhhhc--Ccccccccccceeeecccccccccccc
Confidence 3688899999864321 122334567889999999999887654 4567888887654321
Q ss_pred -CCCChhHHHHHHHHHHHHHHH-H-HcCCCeEEEEccc
Q psy1119 925 -NAGQTNYGMANSIMERICEAR-R-AEGLPGLAVEWGA 959 (1392)
Q Consensus 925 -~~gq~~Yaaana~ld~la~~r-~-~~Glp~~ai~~g~ 959 (1392)
......|+.+|.+.+..++.. + ..|++.+.+..+.
T Consensus 150 ~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~ 187 (346)
T d1ek6a_ 150 TGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFN 187 (346)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECE
T ss_pred ccccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecc
Confidence 123346999999999887743 3 3588887776544
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.49 E-value=5.4e-07 Score=102.50 Aligned_cols=167 Identities=16% Similarity=0.043 Sum_probs=112.2
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcc--cHH---HHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVK--NGY---QALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~--~~~---~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
|++|||||+|=||..+++.|.++|.+ |+.+.|.... ... ........ ....+.+..+|+++.+.+.+.++..
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Di~~~~~~~~~~~~~ 78 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYE-VHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDASSLRRWIDVI 78 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCE-EEEEECCCcccchhhhhhhhhhhhhc--cccceEEEEccccCHHHHHHHHhhh
Confidence 78999999999999999999999997 6666764321 100 00001111 1245778899999999999888764
Q ss_pred hhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC--CC-CeEEEecccccccCC--------
Q psy1119 857 NKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP--TL-GQFVVFSSVSCGRGN-------- 925 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~--~l-~~fV~~SS~s~~~G~-------- 925 (1392)
.+|.|||+|+..... .+.++-...+..++.|+.++.++++.... .. ..++..||. ...+.
T Consensus 79 ----~~D~Vih~Aa~~~~~----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~-~~~~~~~~~~~E~ 149 (339)
T d1n7ha_ 79 ----KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSS-EMFGSTPPPQSET 149 (339)
T ss_dssp ----CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG-GGGTTSCSSBCTT
T ss_pred ----ccchhhhcccccccc----ccccCccccccccccccchhhhhhhhcccccccceeeeecccc-eecccCCCCCCCC
Confidence 789999999864322 12344556788899999998877653211 11 234444443 33222
Q ss_pred ---CCChhHHHHHHHHHHHHHH-HHHcCCCeEEEEcccc
Q psy1119 926 ---AGQTNYGMANSIMERICEA-RRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 926 ---~gq~~Yaaana~ld~la~~-r~~~Glp~~ai~~g~~ 960 (1392)
...+.|+.+|.+-+.++.. ++..|++.+.+..+.+
T Consensus 150 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v 188 (339)
T d1n7ha_ 150 TPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNH 188 (339)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCE
T ss_pred CCCCCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccc
Confidence 1356899999999998765 4455999888887554
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=98.49 E-value=1e-06 Score=98.60 Aligned_cols=95 Identities=19% Similarity=0.126 Sum_probs=73.6
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCceEEEecC------CC----CCCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HT----NPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e----~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
.++||+|+|+..|+...|......+.....|+.++ .. ....+++++++++.+.+... +..+++|+||
T Consensus 33 ~g~pvvllHG~~g~~~~~~~~~~~l~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~~~~~l---~~~~~~lvGh 109 (313)
T d1azwa_ 33 HGKPVVMLHGGPGGGCNDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTWDLVADIERLRTHL---GVDRWQVFGG 109 (313)
T ss_dssp TSEEEEEECSTTTTCCCGGGGGGSCTTTEEEEEECCTTSTTSBSTTCCTTCCHHHHHHHHHHHHHHT---TCSSEEEEEE
T ss_pred CCCEEEEECCCCCCccchHHHhHHhhcCCEEEEEeccccCCCCccccccchhHHHHHHHHHHHHHhh---ccccceeEEe
Confidence 45899999999998888887777777788888886 11 12247999999988888743 4568999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
||||.+|+.+|.+.. ..+ .+++++..+.
T Consensus 110 S~Gg~ia~~~a~~~p---~~v~~lv~~~~~~~ 138 (313)
T d1azwa_ 110 SWGSTLALAYAQTHP---QQVTELVLRGIFLL 138 (313)
T ss_dssp THHHHHHHHHHHHCG---GGEEEEEEESCCCC
T ss_pred cCCcHHHHHHHHHhh---hceeeeeEeccccc
Confidence 999999999988643 345 7888877554
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=98.46 E-value=5.1e-07 Score=103.43 Aligned_cols=155 Identities=16% Similarity=0.117 Sum_probs=108.0
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
|-.+|.+|||||+|=||..+++.|+++|.. |..++|+..+.... .+..+ .-..+..+.+|++|.+.+.++++..
T Consensus 5 ~~~~KkILVTG~tGfIGs~lv~~Ll~~g~~-V~~~~r~~~~~~~~---~~~~~-~~~~i~~~~~Dl~d~~~l~~~~~~~- 78 (356)
T d1rkxa_ 5 FWQGKRVFVTGHTGFKGGWLSLWLQTMGAT-VKGYSLTAPTVPSL---FETAR-VADGMQSEIGDIRDQNKLLESIREF- 78 (356)
T ss_dssp HHTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCSSSSCH---HHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-
T ss_pred hhCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCCCccHHH---Hhhhh-cccCCeEEEeeccChHhhhhhhhhc-
Confidence 457899999999999999999999999997 77888876543322 12111 1123667899999999998887764
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC-----------
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA----------- 926 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~----------- 926 (1392)
.++.|+|+|+..... .+.+.....+.+++.|+.++.+++... ....+++..||.....+..
T Consensus 79 ---~~~~v~~~aa~~~~~----~~~~~~~~~~~~Nv~g~~n~l~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 150 (356)
T d1rkxa_ 79 ---QPEIVFHMAAQPLVR----LSYSEPVETYSTNVMGTVYLLEAIRHV-GGVKAVVNITSDKCYDNKEWIWGYRENEAM 150 (356)
T ss_dssp ---CCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHH-CCCCEEEEECCGGGBCCCCSSSCBCTTSCB
T ss_pred ---hhhhhhhhhcccccc----ccccCCccccccccccchhhhhhhhcc-cccccccccccccccccccccccccccccc
Confidence 688999999854321 123445677888999999998887654 2234455444443332111
Q ss_pred -CChhHHHHHHHHHHHHHHHH
Q psy1119 927 -GQTNYGMANSIMERICEARR 946 (1392)
Q Consensus 927 -gq~~Yaaana~ld~la~~r~ 946 (1392)
....|+..|...+.+++..+
T Consensus 151 ~p~~~y~~~k~~~e~~~~~~~ 171 (356)
T d1rkxa_ 151 GGYDPYSNSKGCAELVTSSYR 171 (356)
T ss_dssp CCSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCccccccccchhhhhHHh
Confidence 24569999998888776544
|
| >d1klpa_ a.28.1.1 (A:) Acyl carrier protein {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.46 E-value=1.4e-07 Score=90.06 Aligned_cols=70 Identities=19% Similarity=0.335 Sum_probs=63.8
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchh-hcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhccc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLA-ELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSFE 1090 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~-~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~~ 1090 (1392)
..+.+.|+++||+ +.++|+.+.+|+ |||+|||++++|.+.|+++||+.++..++ ..+|+++|++++....
T Consensus 10 ~~l~~iv~~~l~~-~~~~i~~~~~~~~dlG~DSl~~~~l~~~le~~f~i~i~~~~~~~~~Tv~~l~~~l~~~~ 81 (115)
T d1klpa_ 10 AGIAEIIEEVTGI-EPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKLE 81 (115)
T ss_dssp HHHHHHHHHHTCC-CTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCC-CccccCcccchhhhcccchhHHHHHHHHHHHHHCCCCCHHHHHhCccHHHHHHHHHHHh
Confidence 4578899999998 568999999997 69999999999999999999999999999 8999999999987654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=98.46 E-value=6.5e-07 Score=102.08 Aligned_cols=160 Identities=11% Similarity=0.038 Sum_probs=108.9
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
.+|||||+|=||..+++.|+++|.-.|+.+.+...... .+.. ..++.++.+|+++.+++.+.+.. .+
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~-------~~~~-~~~~~~i~~Di~~~~~~~~~~~~-----~~ 68 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS-------RFLN-HPHFHFVEGDISIHSEWIEYHVK-----KC 68 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGG-------GGTT-CTTEEEEECCTTTCSHHHHHHHH-----HC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchh-------hhcc-CCCeEEEECccCChHHHHHHHHh-----CC
Confidence 37999999999999999999999545776665432111 1111 24588899999987765543221 48
Q ss_pred cEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC---------------
Q psy1119 863 DGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG--------------- 927 (1392)
Q Consensus 863 ~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g--------------- 927 (1392)
|.|||+|+...... ..++-...+..++.|++++-+++... . -.+++.||.+...+...
T Consensus 69 d~Vih~a~~~~~~~----~~~~~~~~~~~nv~gt~~ll~~~~~~--~-~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~ 141 (342)
T d2blla1 69 DVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVKY--R-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPV 141 (342)
T ss_dssp SEEEECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHHT--T-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCT
T ss_pred Cccccccccccccc----cccCCccccccccccccccccccccc--c-cccccccccccccccccccccccccccccccc
Confidence 99999999644321 12233467889999999998887653 2 23455565554332211
Q ss_pred ---ChhHHHHHHHHHHHHHHHHH-cCCCeEEEEccccCc
Q psy1119 928 ---QTNYGMANSIMERICEARRA-EGLPGLAVEWGAVGE 962 (1392)
Q Consensus 928 ---q~~Yaaana~ld~la~~r~~-~Glp~~ai~~g~~~~ 962 (1392)
...|+.+|...+.++...++ .|++...+....+-.
T Consensus 142 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g 180 (342)
T d2blla1 142 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMG 180 (342)
T ss_dssp TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEEC
T ss_pred CCCcchhhhcccchhhhhhhhhcccCceeEEeecccccc
Confidence 25699999999999876544 489988877766543
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.45 E-value=1e-06 Score=101.32 Aligned_cols=164 Identities=15% Similarity=0.168 Sum_probs=116.6
Q ss_pred cccCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Q psy1119 776 YYADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE 855 (1392)
Q Consensus 776 ~~~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~ 855 (1392)
++...+..+|||||+|=||..++++|.++|.. |+.+.|+..... .. .. ....+..+|+.+.+++.++++
T Consensus 10 ~~~~~nMKILVTGgsGfIGs~lv~~L~~~g~~-V~~~d~~~~~~~-----~~--~~--~~~~~~~~D~~~~~~~~~~~~- 78 (363)
T d2c5aa1 10 YWPSENLKISITGAGGFIASHIARRLKHEGHY-VIASDWKKNEHM-----TE--DM--FCDEFHLVDLRVMENCLKVTE- 78 (363)
T ss_dssp SCTTSCCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCCSSS-----CG--GG--TCSEEEECCTTSHHHHHHHHT-
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHCcCE-EEEEeCCCccch-----hh--hc--ccCcEEEeechhHHHHHHHhh-
Confidence 45667888999999999999999999999987 555544322110 00 01 123456789999887766543
Q ss_pred HhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC----------
Q psy1119 856 ANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN---------- 925 (1392)
Q Consensus 856 ~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~---------- 925 (1392)
.+|.|||+|+.......... .....+.+++.|+.+|.+++... ...+||++||.+..-..
T Consensus 79 -----~~d~Vih~a~~~~~~~~~~~---~~~~~~~~n~~gt~~ll~~~~~~--~vk~~i~~SS~~~~~~~~~~~~~~~~~ 148 (363)
T d2c5aa1 79 -----GVDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMIEAARIN--GIKRFFYASSACIYPEFKQLETTNVSL 148 (363)
T ss_dssp -----TCSEEEECCCCCCCHHHHTT---CHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEGGGSCGGGSSSSSSCEE
T ss_pred -----cCCeEeeccccccccccccc---ccccccccccchhhHHHHhHHhh--Ccccccccccccccccccccccccccc
Confidence 58999999987654333222 34566788999999998887654 45689999997654321
Q ss_pred --------CCChhHHHHHHHHHHHHHHHHHc-CCCeEEEEcccc
Q psy1119 926 --------AGQTNYGMANSIMERICEARRAE-GLPGLAVEWGAV 960 (1392)
Q Consensus 926 --------~gq~~Yaaana~ld~la~~r~~~-Glp~~ai~~g~~ 960 (1392)
.....|+.+|...+.+++..+.. |++.+.+..+.+
T Consensus 149 ~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~v 192 (363)
T d2c5aa1 149 KESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNI 192 (363)
T ss_dssp CGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCE
T ss_pred ccccCCcCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeE
Confidence 12467999999999999865544 999888876554
|
| >d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: apo-D-alanyl carrier protein domain: apo-D-alanyl carrier protein species: Lactobacillus casei [TaxId: 1582]
Probab=98.42 E-value=9.5e-08 Score=84.79 Aligned_cols=69 Identities=23% Similarity=0.229 Sum_probs=61.2
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchhhcC-cchhhHHHHHHHHHHHhCCccChhhhc---cCCHHHHHHHHhcc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLAELG-MDSMMAVEIKQTLEREFEVFLTPQDIR---GLTFAKLQDIAVSF 1089 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~~lG-~DSL~avel~~~l~~~~~~~l~~~~i~---~~ti~~La~~~~~~ 1089 (1392)
..+.+.+++++|. +...++++.+|+++| +|||++++|..+|+++||+.+|..++. .+|+++|++++...
T Consensus 7 ~~v~~il~~~l~~-~~~~i~~d~~l~e~gglDSl~~vel~~~ie~~fgi~i~~~~l~~~~~~Tv~~l~~~v~~l 79 (80)
T d1dv5a_ 7 NGVLDILADLTGS-DDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQA 79 (80)
T ss_dssp HHHHHHHHHHHTS-SSTTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcc-chhhcCCCccccccCCCCHHHHHHHHHHHHHHHCCCCCHHHhhHHhCCCHHHHHHHHHHc
Confidence 4688999999998 558899999999986 799999999999999999999999982 47999999988653
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=98.40 E-value=3.1e-07 Score=94.81 Aligned_cols=94 Identities=19% Similarity=0.298 Sum_probs=62.2
Q ss_pred CceeEeecCCCccccccHHHHhhcCCc-eE---EEecCCCCCCC----CHHHHHHHHHHHHhhhccCCCCcEEEEeechh
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQ-VL---VFQFDHTNPPD----TIPEMADSLLPHFKKRLVHGTDEIKLVGFSFG 1228 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~-~~---v~~l~~e~~~~----sieelA~~y~~~I~~~q~qp~gPy~L~G~S~G 1228 (1392)
.+|++|+|+.+|+...|..+++.|... .. ++......... +.+.+++. ++++.... +..++.|+|||||
T Consensus 2 ~~PVv~vHG~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~-i~~~~~~~--~~~~v~lvGHSmG 78 (179)
T d1ispa_ 2 HNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPVLSRF-VQKVLDET--GAKKVDIVAHSMG 78 (179)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHHHHHHHHHHH-HHHHHHHH--CCSCEEEEEETHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHcCCeEEEEecCCccccccccchhhhhHHHH-HHHHHHhc--CCceEEEEeecCc
Confidence 479999999999999999999998643 22 22222222222 34444333 33333232 4568999999999
Q ss_pred HHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1229 GMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1229 g~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
|++|.+++.++... ..| +++++.++
T Consensus 79 G~va~~~~~~~~~~-~~V~~~V~l~~p 104 (179)
T d1ispa_ 79 GANTLYYIKNLDGG-NKVANVVTLGGA 104 (179)
T ss_dssp HHHHHHHHHHSSGG-GTEEEEEEESCC
T ss_pred CHHHHHHHHHcCCc-hhhCEEEEECCC
Confidence 99999998877432 235 78888653
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=98.39 E-value=2.7e-06 Score=98.51 Aligned_cols=169 Identities=15% Similarity=0.194 Sum_probs=115.1
Q ss_pred eEEEEcCcchHHHHHHHHHHHh-CCceEEEec---CCCc------ccHHHHHHHHHHh-----cCCceEEEEeccCCCHH
Q psy1119 783 SYIICGGLGGFGLELADWLVLR-GARKLVLTS---RSGV------KNGYQALRIKIWK-----SYDVQVLISTDDITTEA 847 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~-GAr~lvl~s---Rs~~------~~~~~~~~~~~l~-----~~G~~v~~~~~Dv~~~~ 847 (1392)
.+|||||+|=||..+++.|.++ |.. |+.+. ++.. ........+.... .....+.++.+|++|.+
T Consensus 4 KVLITG~tGfIGs~lv~~LL~~~~~~-V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~ 82 (383)
T d1gy8a_ 4 RVLVCGGAGYIGSHFVRALLRDTNHS-VVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED 82 (383)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCE-EEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHhCCCE-EEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence 5899999999999999999875 665 66543 2211 1111111111110 11235778899999999
Q ss_pred HHHHHHHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC--
Q psy1119 848 GVVNLLTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN-- 925 (1392)
Q Consensus 848 ~v~~l~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~-- 925 (1392)
.++++++. ..++|.|||+|+...... ..+.....+..|+.|+.++.++.+.. ....|+++||.+.....
T Consensus 83 ~l~~~~~~---~~~~d~ViH~Aa~~~~~~----~~~~~~~~~~~N~~~t~~~l~~~~~~--~~~~~~~~~s~~~~~~~~~ 153 (383)
T d1gy8a_ 83 FLNGVFTR---HGPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAMLLH--KCDKIIFSSSAAIFGNPTM 153 (383)
T ss_dssp HHHHHHHH---SCCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGTBSCCC
T ss_pred Hhhhhhhc---cceeehhhcccccccccc----cccccccccccccccccccchhhhcc--CCccccccccccccccccc
Confidence 98888865 458999999998644322 22334456778999999998887654 44567777666543211
Q ss_pred ----------------CCChhHHHHHHHHHHHHHHHHH-cCCCeEEEEccccC
Q psy1119 926 ----------------AGQTNYGMANSIMERICEARRA-EGLPGLAVEWGAVG 961 (1392)
Q Consensus 926 ----------------~gq~~Yaaana~ld~la~~r~~-~Glp~~ai~~g~~~ 961 (1392)
...+.|+.+|...+.+++.... .|++.+++..+.+-
T Consensus 154 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vy 206 (383)
T d1gy8a_ 154 GSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNAC 206 (383)
T ss_dssp -----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE
T ss_pred ccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceee
Confidence 1257799999999999987554 59998888877653
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=98.38 E-value=1.3e-06 Score=95.73 Aligned_cols=94 Identities=16% Similarity=0.125 Sum_probs=73.6
Q ss_pred CCceeEeecCCCccccccHHHHhhcCCceEEEecC----------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD----------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~----------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
.++||+|+|+.+|+...|..+...|.....|+.++ ......++..+++.....+... +..++.++||
T Consensus 33 ~g~pvvllHG~~~~~~~w~~~~~~l~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~~~~vg~ 109 (313)
T d1wm1a_ 33 NGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMA---GVEQWLVFGG 109 (313)
T ss_dssp TSEEEEEECCTTTCCCCGGGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSHHHHHHHHHHHHHHT---TCSSEEEEEE
T ss_pred CCCeEEEECCCCCcccchHHHHHHhhcCCEEEEEeCCCcccccccccccccchhhHHHHHHhhhhcc---CCCcceeEee
Confidence 45899999999999999999999999889999986 1122346888888887777633 5678999999
Q ss_pred chhHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
|+||.+++.+|..... .+ .+++++..+
T Consensus 110 s~g~~~~~~~a~~~~~---~v~~~v~~~~~~ 137 (313)
T d1wm1a_ 110 SWGSTLALAYAQTHPE---RVSEMVLRGIFT 137 (313)
T ss_dssp THHHHHHHHHHHHCGG---GEEEEEEESCCC
T ss_pred ecCCchhhHHHHHHhh---hheeeeeccccc
Confidence 9999999999876543 35 566666544
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.37 E-value=1.1e-06 Score=98.87 Aligned_cols=156 Identities=17% Similarity=0.200 Sum_probs=104.9
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
|.+|||||+|=||..+++.|.++|.. |+.+.|........ +..+. .-.++.....|+.+. .+..
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~-V~~~d~~~~~~~~~---~~~~~-~~~~~d~~~~~~~~~-----------~~~~ 65 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHE-VTVVDNFFTGRKRN---VEHWI-GHENFELINHDVVEP-----------LYIE 65 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCGGG---TGGGT-TCTTEEEEECCTTSC-----------CCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCE-EEEEeCCCcCCHHH---HHHhc-CCCceEEEehHHHHH-----------HHcC
Confidence 67899999999999999999999997 55555432111111 11111 122344455554321 2346
Q ss_pred ccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC----------------
Q psy1119 862 VDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN---------------- 925 (1392)
Q Consensus 862 I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~---------------- 925 (1392)
+|.|||+|+....... . ++....+++|+.|+.+|.++++... -.||++||.+.. |.
T Consensus 66 ~d~VihlAa~~~~~~~-~---~~~~~~~~~Nv~g~~~ll~~~~~~~---~k~I~~SS~~vy-~~~~~~~~~e~~~~~~~~ 137 (312)
T d2b69a1 66 VDQIYHLASPASPPNY-M---YNPIKTLKTNTIGTLNMLGLAKRVG---ARLLLASTSEVY-GDPEVHPQSEDYWGHVNP 137 (312)
T ss_dssp CSEEEECCSCCSHHHH-T---TCHHHHHHHHHHHHHHHHHHHHHHT---CEEEEEEEGGGG-BSCSSSSBCTTCCCBCCS
T ss_pred CCEEEECcccCCchhH-H---hCHHHHHHHHHHHHHHHHHHHHHcC---CcEEEEEChhee-cCCCCCCCCccccCCCCC
Confidence 8999999986542221 1 2334667889999999999887642 368999986443 22
Q ss_pred -CCChhHHHHHHHHHHHHHHHH-HcCCCeEEEEccccC
Q psy1119 926 -AGQTNYGMANSIMERICEARR-AEGLPGLAVEWGAVG 961 (1392)
Q Consensus 926 -~gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~~ 961 (1392)
...+.|+.+|.+.+.+++..+ ..|++.+.+..+.+-
T Consensus 138 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vy 175 (312)
T d2b69a1 138 IGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTF 175 (312)
T ss_dssp SSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEE
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEE
Confidence 135679999999999998754 459999888887764
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.36 E-value=1.8e-07 Score=100.56 Aligned_cols=93 Identities=16% Similarity=0.284 Sum_probs=70.9
Q ss_pred CceeEeecCCCccccccHHHHhhcCC---ceEEEecC-------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeec
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINA---QVLVFQFD-------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFS 1226 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~---~~~v~~l~-------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S 1226 (1392)
.+||+|+||.+++...|..+++.|.. .+.|+.++ ..+...+++.+++++.+.++ .. + .+++|+|||
T Consensus 2 ~~PvvllHG~~~~~~~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~~~~~~~~~~~l~~~l~-~l--~-~~~~lvGhS 77 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREAVVPIMA-KA--P-QGVHLICYS 77 (268)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHHHHHHHHHHHHHHHHH-HC--T-TCEEEEEET
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCccccCHHHHHHHHHHHHh-cc--C-CeEEEEccc
Confidence 47999999999999999999999864 46777765 22334577788877776665 32 3 689999999
Q ss_pred hhHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1227 FGGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1227 ~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
|||.||+++|.+..+ ..+ .|++++++.
T Consensus 78 ~GG~ia~~~a~~~p~--~~v~~lvl~~~~~ 105 (268)
T d1pjaa_ 78 QGGLVCRALLSVMDD--HNVDSFISLSSPQ 105 (268)
T ss_dssp HHHHHHHHHHHHCTT--CCEEEEEEESCCT
T ss_pred cHHHHHHHHHHHCCc--cccceEEEECCCC
Confidence 999999999998532 246 677887643
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.34 E-value=1e-06 Score=100.42 Aligned_cols=89 Identities=22% Similarity=0.220 Sum_probs=61.0
Q ss_pred CCCCceeEeecCCCcccccc------HHHHhhcC-CceEEEecC----CC-------------CCCCCHHHHHH----HH
Q psy1119 1154 VGNNNTIFMVPGIEGIATVL------EPLAKNIN-AQVLVFQFD----HT-------------NPPDTIPEMAD----SL 1205 (1392)
Q Consensus 1154 ~g~~~pLF~vp~agG~~~~y------~~La~~L~-~~~~v~~l~----~e-------------~~~~sieelA~----~y 1205 (1392)
.+.++||+|+||.++++..| ..|+..|. ....|+.++ +. ....++++++. ..
T Consensus 55 ~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~ 134 (377)
T d1k8qa_ 55 IGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPAT 134 (377)
T ss_dssp TTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHH
T ss_pred CCCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCcchhhccCCHHHHhhhhHHHH
Confidence 45678999999999999887 34777765 347777775 10 01235666653 23
Q ss_pred HHHHhhhccCCCCcEEEEeechhHHHHHHHHHHHHHcCC
Q psy1119 1206 LPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGT 1244 (1392)
Q Consensus 1206 ~~~I~~~q~qp~gPy~L~G~S~Gg~VA~EmA~~Le~~G~ 1244 (1392)
++.|++.. +..+++|+||||||.+|+.+|.+-.+.-.
T Consensus 135 i~~i~~~~--g~~~v~lvGhS~GG~ia~~~a~~~p~~~~ 171 (377)
T d1k8qa_ 135 IDFILKKT--GQDKLHYVGHSQGTTIGFIAFSTNPKLAK 171 (377)
T ss_dssp HHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHCHHHHT
T ss_pred HHHHHHHc--CCCCEEEEEecchHHHHHHHHHhhhhhhh
Confidence 34444332 56789999999999999999987655433
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=98.31 E-value=8.3e-07 Score=101.50 Aligned_cols=158 Identities=17% Similarity=0.159 Sum_probs=109.6
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCce-EEEec---CCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARK-LVLTS---RSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~-lvl~s---Rs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
+.+|||||+|=||..+++.|.++|... ++... +++.. ..+.. ..+-++..+.+|++|.+.+..+++
T Consensus 3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~-----~~~~~--~~~~~i~~~~~Di~d~~~~~~~~~--- 72 (346)
T d1oc2a_ 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK-----ANLEA--ILGDRVELVVGDIADAELVDKLAA--- 72 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG-----GGTGG--GCSSSEEEEECCTTCHHHHHHHHT---
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccH-----HHHHH--hhcCCeEEEEccCCCHHHHHHHHh---
Confidence 679999999999999999999999863 33222 11111 11111 234568889999999998887753
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC------------
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN------------ 925 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~------------ 925 (1392)
..+.|+|+|+....... ..+....+++|+.|+.|+.++..... -.+|++||.+.. |+
T Consensus 73 ---~~~~v~~~a~~~~~~~~----~~~~~~~~~~N~~g~~nll~~~~~~~---~k~i~~ss~~vy-g~~~~~~~~~~~~~ 141 (346)
T d1oc2a_ 73 ---KADAIVHYAAESHNDNS----LNDPSPFIHTNFIGTYTLLEAARKYD---IRFHHVSTDEVY-GDLPLREDLPGHGE 141 (346)
T ss_dssp ---TCSEEEECCSCCCHHHH----HHCCHHHHHHHTHHHHHHHHHHHHHT---CEEEEEEEGGGG-CCBCCGGGSTTTTC
T ss_pred ---hhhhhhhhhhcccccch----hhCcccceeeehHhHHhhhhhhcccc---ccccccccceEe-cccCcccccccccc
Confidence 46779999976543221 12334678899999999988876552 357777776543 21
Q ss_pred ------------CCChhHHHHHHHHHHHHHHH-HHcCCCeEEEEcccc
Q psy1119 926 ------------AGQTNYGMANSIMERICEAR-RAEGLPGLAVEWGAV 960 (1392)
Q Consensus 926 ------------~gq~~Yaaana~ld~la~~r-~~~Glp~~ai~~g~~ 960 (1392)
...+.|+.+|.+.+.+++.- +..|++.+.+..+.+
T Consensus 142 ~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v 189 (346)
T d1oc2a_ 142 GPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNN 189 (346)
T ss_dssp STTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCE
T ss_pred CcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecce
Confidence 12367999999999999754 455899887777554
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.29 E-value=1.1e-06 Score=94.46 Aligned_cols=152 Identities=15% Similarity=0.070 Sum_probs=105.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCC-ceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGA-RKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GA-r~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
.++++|||||+|-+|.++++.|.++|. ..|.+++|+....... ....+....+|+.+.+++. ..
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~---------~~~~i~~~~~D~~~~~~~~------~~ 77 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE---------AYKNVNQEVVDFEKLDDYA------SA 77 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG---------GGGGCEEEECCGGGGGGGG------GG
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc---------ccceeeeeeeccccccccc------cc
Confidence 568999999999999999999999996 3588889876432211 1123455567877755443 33
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
+..+|.+||+||... ...........++.++.++.+++... ....||.+||..+.. .....|+.+|...
T Consensus 78 ~~~~d~vi~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~~--~v~~fi~~Ss~~~~~--~~~~~Y~~~K~~~ 146 (232)
T d2bkaa1 78 FQGHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELAKAG--GCKHFNLLSSKGADK--SSNFLYLQVKGEV 146 (232)
T ss_dssp GSSCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCT--TCSSHHHHHHHHH
T ss_pred ccccccccccccccc-------cccchhhhhhhcccccceeeeccccc--CccccccCCcccccc--CccchhHHHHHHh
Confidence 456899999998531 22344555677899999998887653 567899999986643 2345699999888
Q ss_pred HHHHHHHHHcCCCe-EEEEcccc
Q psy1119 939 ERICEARRAEGLPG-LAVEWGAV 960 (1392)
Q Consensus 939 d~la~~r~~~Glp~-~ai~~g~~ 960 (1392)
+.... ..|.+- +-+..|.+
T Consensus 147 E~~l~---~~~~~~~~IlRP~~i 166 (232)
T d2bkaa1 147 EAKVE---ELKFDRYSVFRPGVL 166 (232)
T ss_dssp HHHHH---TTCCSEEEEEECCEE
T ss_pred hhccc---cccccceEEecCcee
Confidence 86543 457774 34455544
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.29 E-value=9.7e-07 Score=94.44 Aligned_cols=158 Identities=14% Similarity=0.028 Sum_probs=104.1
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCce-EEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARK-LVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~-lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
+++|||||+|.||.++++.|+++|... ++.++|+.. . ... ....+.++.+|+++.+.+.++++
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~----~---~~~---~~~~~~~~~~d~~~~~~~~~~~~------ 67 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ----G---KEK---IGGEADVFIGDITDADSINPAFQ------ 67 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHH----H---HHH---TTCCTTEEECCTTSHHHHHHHHT------
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHH----H---HHh---ccCCcEEEEeeeccccccccccc------
Confidence 689999999999999999999999863 445677631 1 112 23346678899999998887664
Q ss_pred CccEEEECcccCCCc---------cccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCC----
Q psy1119 861 PVDGIFNLAVVLKDA---------LFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAG---- 927 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~---------~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~g---- 927 (1392)
.+|.|||+|+..... ...+.....+......++.|+.++....... ..+.+...|+.........
T Consensus 68 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~~~~~~~~~~ 145 (252)
T d2q46a1 68 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA--GVKHIVVVGSMGGTNPDHPLNKL 145 (252)
T ss_dssp TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH--TCSEEEEEEETTTTCTTCGGGGG
T ss_pred cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc--cccccccccccccCCCCcccccc
Confidence 589999999764211 1111122234455667888998887766544 4467788887665543322
Q ss_pred -ChhHHHHHHHHHHHHHHHHHcCCCeEEEEcccc
Q psy1119 928 -QTNYGMANSIMERICEARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 928 -q~~Yaaana~ld~la~~r~~~Glp~~ai~~g~~ 960 (1392)
...|...+.... ......|++.+.+..+.+
T Consensus 146 ~~~~~~~~~~~~~---~~~~~~~~~~~ilRp~~v 176 (252)
T d2q46a1 146 GNGNILVWKRKAE---QYLADSGTPYTIIRAGGL 176 (252)
T ss_dssp GGCCHHHHHHHHH---HHHHHSSSCEEEEEECEE
T ss_pred cccchhhhhhhhh---hhhhcccccceeecceEE
Confidence 233444444333 334567999888887765
|
| >d1t8ka_ a.28.1.1 (A:) Acyl carrier protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Escherichia coli [TaxId: 562]
Probab=98.27 E-value=6.8e-07 Score=78.46 Aligned_cols=70 Identities=21% Similarity=0.329 Sum_probs=63.1
Q ss_pred chHHHHHHHHhCCCCCcccCcCcchh-hcCcchhhHHHHHHHHHHHhCCccChhhh-ccCCHHHHHHHHhccc
Q psy1119 1020 TNIVDAVINILGLRDLKTVSLHSTLA-ELGMDSMMAVEIKQTLEREFEVFLTPQDI-RGLTFAKLQDIAVSFE 1090 (1392)
Q Consensus 1020 ~~l~~~~a~~l~~~~~~~i~~~~~l~-~lG~DSL~avel~~~l~~~~~~~l~~~~i-~~~ti~~La~~~~~~~ 1090 (1392)
+.+.+.+++.+++ ++++|.++.+|. +||+|||+.+||...++++||+.+|..++ ...|++++.+++....
T Consensus 5 ~~v~~iia~~l~i-~~~~i~~~~~l~~dLg~DSl~~~el~~~iE~~f~i~i~~~~~~~~~Tv~dlv~~i~~~~ 76 (77)
T d1t8ka_ 5 ERVKKIIGEQLGV-KQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQ 76 (77)
T ss_dssp HHHHHHHHHHHTC-CGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHCC-CHHHcCCCCcchhccccchhHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHHcc
Confidence 4678899999998 568999999996 69999999999999999999999999999 6789999999987653
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.27 E-value=1.7e-06 Score=90.46 Aligned_cols=84 Identities=13% Similarity=0.232 Sum_probs=58.1
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCC-ceEEEecC----CC----CCCCCHHHHHHHHHHHHhhhccCCCCcEEEEee
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD----HT----NPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~----~e----~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~ 1225 (1392)
+++++++|+|+.+|+...|.+|+++|.. ...|+.++ +. ....+..+.+......+.........++.|+||
T Consensus 9 ~~~~~vvliHG~~~~~~~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 88 (242)
T d1tqha_ 9 AGERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNKGYEKIAVAGL 88 (242)
T ss_dssp CSSCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCccccccccccchhHHHHHHHHHHhhhhhcccCceEEEEc
Confidence 4457899999999999999999999975 48888876 11 122344444444333332111124568999999
Q ss_pred chhHHHHHHHHHH
Q psy1119 1226 SFGGMVALELAIK 1238 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~ 1238 (1392)
||||.+|..++.+
T Consensus 89 S~Gg~~~~~~~~~ 101 (242)
T d1tqha_ 89 SLGGVFSLKLGYT 101 (242)
T ss_dssp THHHHHHHHHHTT
T ss_pred chHHHHhhhhccc
Confidence 9999999988764
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=98.25 E-value=2.4e-06 Score=96.42 Aligned_cols=163 Identities=13% Similarity=0.093 Sum_probs=111.6
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCc-----eEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGAR-----KLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr-----~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
.+|||||+|=||..++++|+++|.. +++...+....... ..+..+ .....+.++.+|.++.......
T Consensus 2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~~-~~~~~~~~~~~d~~~~~~~~~~----- 73 (322)
T d1r6da_ 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPV-DADPRLRFVHGDIRDAGLLARE----- 73 (322)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGG-TTCTTEEEEECCTTCHHHHHHH-----
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhhh-hcCCCeEEEEeccccchhhhcc-----
Confidence 4799999999999999999999864 23332221100000 011111 2245688899999998866643
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC-----------
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA----------- 926 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~----------- 926 (1392)
....|.|+|+|+...... ........+..|+.|+++|.+++... ....||++||.+..-...
T Consensus 74 -~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~--~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~ 146 (322)
T d1r6da_ 74 -LRGVDAIVHFAAESHVDR----SIAGASVFTETNVQGTQTLLQCAVDA--GVGRVVHVSTNQVYGSIDSGSWTESSPLE 146 (322)
T ss_dssp -TTTCCEEEECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHHHHT--TCCEEEEEEEGGGGCCCSSSCBCTTSCCC
T ss_pred -ccccceEEeecccccccc----cccchHHHhhhhHHHHHHHHHHHHHc--CCceEEEeecceeecCCCCCCCCCCCCCC
Confidence 236899999998643322 23344566789999999999888654 346899998876543221
Q ss_pred CChhHHHHHHHHHHHHHHHH-HcCCCeEEEEcccc
Q psy1119 927 GQTNYGMANSIMERICEARR-AEGLPGLAVEWGAV 960 (1392)
Q Consensus 927 gq~~Yaaana~ld~la~~r~-~~Glp~~ai~~g~~ 960 (1392)
..+.|+.+|.+.+.+++..+ +.|++.+.+..+.+
T Consensus 147 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v 181 (322)
T d1r6da_ 147 PNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNN 181 (322)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeE
Confidence 23589999999999988754 44999988887765
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=98.20 E-value=2.7e-06 Score=95.31 Aligned_cols=191 Identities=17% Similarity=0.199 Sum_probs=104.9
Q ss_pred ceeEeecCCCccccccHHHHhhcCCc-eEEEecC--C-------CCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1158 NTIFMVPGIEGIATVLEPLAKNINAQ-VLVFQFD--H-------TNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~~y~~La~~L~~~-~~v~~l~--~-------e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
+.++++||.+++...|.+++++|... +.|+.++ + .....++.+...++...+....-++..|..|+||||
T Consensus 33 ~~Vvi~HG~~~~~~~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~~~~~~~~~~dl~~vi~~l~~~~~~~i~lvG~Sm 112 (302)
T d1thta_ 33 NTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASL 112 (302)
T ss_dssp CEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC--------CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETH
T ss_pred CEEEEeCCCcchHHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccCCCHHHHHHHHHHHHHhhhccCCceeEEEEEch
Confidence 46899999999999999999999764 8888875 1 123346666665544333211112445899999999
Q ss_pred hHHHHHHHHHHHHHcCCccEEEEEeCCCCCCccccCCCCChHHHHHHHHhc---------CCccccC--CHHHHHHHHHH
Q psy1119 1228 GGMVALELAIKLEQLGTKCHLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDL---------MPEDATH--SRTYQRNLAHA 1296 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~---------~~~~~~~--~~~~l~~~~~~ 1296 (1392)
||.+|+.+|.. .++..++..++... ..+.+...+.. .+..... .......+...
T Consensus 113 GG~ial~~A~~-----~~v~~li~~~g~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (302)
T d1thta_ 113 SARVAYEVISD-----LELSFLITAVGVVN----------LRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRD 177 (302)
T ss_dssp HHHHHHHHTTT-----SCCSEEEEESCCSC----------HHHHHHHHHSSCGGGSCGGGCCSEEEETTEEEEHHHHHHH
T ss_pred HHHHHHHHhcc-----cccceeEeeccccc----------HHHHHHHHHhhccchhhhhhccccccccccchhhHHHHHH
Confidence 99999988842 34533333333221 12222222211 1111000 00000111111
Q ss_pred HHHHHHhhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccc-cCCCeEEEEEccCccccccChHH
Q psy1119 1297 AYKRITSILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKV-CKKPVKVHFVDGNHFTVLDNIKS 1363 (1392)
Q Consensus 1297 ~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~-~~g~v~v~~v~G~H~~ml~~~~~ 1363 (1392)
.................++++|++++.|++|. +..+....+-+. -.+..+++.++|..+.+.+++.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~~H~l~e~~~~ 246 (302)
T d1thta_ 178 CFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLGENLVV 246 (302)
T ss_dssp HHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTTSSHHH
T ss_pred HHHhHHHHHHHHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhCCCCCceEEEecCCCcccccChHH
Confidence 11100000000011123688999999999998 554444444433 34678999999966667777654
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=98.08 E-value=6.2e-06 Score=84.55 Aligned_cols=78 Identities=18% Similarity=0.175 Sum_probs=54.6
Q ss_pred ceeEeecCCCccccc--cHHHHhhcCC-ceEEEecC-CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHHH
Q psy1119 1158 NTIFMVPGIEGIATV--LEPLAKNINA-QVLVFQFD-HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVAL 1233 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~~--y~~La~~L~~-~~~v~~l~-~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA~ 1233 (1392)
.++|++|+.+|+... |..|++.|.. ...++.++ ...-...+++.++.+...+. ....|..|+||||||.+|.
T Consensus 2 k~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~~~~~~~~~l~~~~~----~~~~~~~lvGhS~Gg~~a~ 77 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPRLEDWLDTLSLYQH----TLHENTYLVAHSLGCPAIL 77 (186)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSCCHHHHHHHHHTTGG----GCCTTEEEEEETTHHHHHH
T ss_pred CEEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcchHHHHHHHHHHHHh----ccCCCcEEEEechhhHHHH
Confidence 479999999998754 7889998864 36666665 22223456665554443332 2467899999999999999
Q ss_pred HHHHHH
Q psy1119 1234 ELAIKL 1239 (1392)
Q Consensus 1234 EmA~~L 1239 (1392)
.+|.+.
T Consensus 78 ~~a~~~ 83 (186)
T d1uxoa_ 78 RFLEHL 83 (186)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 887644
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.08 E-value=1.6e-06 Score=91.52 Aligned_cols=152 Identities=12% Similarity=0.099 Sum_probs=91.4
Q ss_pred CCceeEeecCCCccccccHHH--HhhcCC-ceEEEecC-------CC---CCCCCHHHHHHHHHHHHhhhccCCCCcEEE
Q psy1119 1156 NNNTIFMVPGIEGIATVLEPL--AKNINA-QVLVFQFD-------HT---NPPDTIPEMADSLLPHFKKRLVHGTDEIKL 1222 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~~y~~L--a~~L~~-~~~v~~l~-------~e---~~~~sieelA~~y~~~I~~~q~qp~gPy~L 1222 (1392)
.++||+++|+.+++...|..+ +..|.. .+.|+.++ .. ....+..++++.+.+.++.. +.++++|
T Consensus 30 ~~~~vvllHG~~~~~~~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~~~~l---~~~~~~l 106 (208)
T d1imja_ 30 ARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDAL---ELGPPVV 106 (208)
T ss_dssp CSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCTTSCCCTHHHHHHHHHH---TCCSCEE
T ss_pred CCCeEEEECCCCCChhHHhhhHHHHHHHHcCCeEEEeecccccCCCCCCcccccchhhhhhhhhhccccc---ccccccc
Confidence 357899999999999888763 456653 47777765 11 11123334444444444422 3467899
Q ss_pred EeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHHHHHH
Q psy1119 1223 VGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRI 1301 (1392)
Q Consensus 1223 ~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1301 (1392)
+||||||.+|..+|.+ ....+ .++++++.... .
T Consensus 107 vG~S~Gg~~a~~~a~~---~p~~v~~lV~~~p~~~~---~---------------------------------------- 140 (208)
T d1imja_ 107 ISPSLSGMYSLPFLTA---PGSQLPGFVPVAPICTD---K---------------------------------------- 140 (208)
T ss_dssp EEEGGGHHHHHHHHTS---TTCCCSEEEEESCSCGG---G----------------------------------------
T ss_pred cccCcHHHHHHHHHHH---hhhhcceeeecCccccc---c----------------------------------------
Confidence 9999999999988753 33445 67776542100 0
Q ss_pred HhhccccCCCCCcccceEEEEeeCCCCCCChhhcCcccccCCCeEEEEEcc-CccccccChHH
Q psy1119 1302 TSILKYTDPKHKAFGGNITLLRPTEQALPTAEDYGLSKVCKKPVKVHFVDG-NHFTVLDNIKS 1363 (1392)
Q Consensus 1302 ~~~~~y~~~~~~~~~~pi~l~~a~~~~~~~~~~~~W~~~~~g~v~v~~v~G-~H~~ml~~~~~ 1363 (1392)
+.+....++++|++++.++.|.........+... -..++..++| +|..++++|+.
T Consensus 141 -----~~~~~~~~i~~P~Lii~G~~D~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~~~p~~ 196 (208)
T d1imja_ 141 -----INAANYASVKTPALIVYGDQDPMGQTSFEHLKQL--PNHRVLIMKGAGHPCYLDKPEE 196 (208)
T ss_dssp -----SCHHHHHTCCSCEEEEEETTCHHHHHHHHHHTTS--SSEEEEEETTCCTTHHHHCHHH
T ss_pred -----cccccccccccccccccCCcCcCCcHHHHHHHhC--CCCeEEEECCCCCchhhhCHHH
Confidence 0000012577899999999886211111122222 2367788875 89988888753
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=98.06 E-value=3.2e-05 Score=81.78 Aligned_cols=161 Identities=17% Similarity=0.162 Sum_probs=96.3
Q ss_pred eEeecC---CCcccc--ccHHHHhhcCC-ceEEEecC------CCCCCCCHHHHHHH---HHHHHhhhccCCCCcEEEEe
Q psy1119 1160 IFMVPG---IEGIAT--VLEPLAKNINA-QVLVFQFD------HTNPPDTIPEMADS---LLPHFKKRLVHGTDEIKLVG 1224 (1392)
Q Consensus 1160 LF~vp~---agG~~~--~y~~La~~L~~-~~~v~~l~------~e~~~~sieelA~~---y~~~I~~~q~qp~gPy~L~G 1224 (1392)
++++|| .||+.. .+..+|+.|.. .+.++.++ .+....+.+..+++ .++.+++. .+..|..++|
T Consensus 38 ~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~~~~~~~~D~~a~~~~~~~~--~~~~~v~l~G 115 (218)
T d2fuka1 38 AIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQ--RPTDTLWLAG 115 (218)
T ss_dssp EEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHH--CTTSEEEEEE
T ss_pred EEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCCccCcCcchHHHHHHHHHHHhhc--ccCceEEEEE
Confidence 466663 345432 46778888864 58888876 12222333333333 33444433 2567899999
Q ss_pred echhHHHHHHHHHHHHHcCCccEEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHHHHHHHhh
Q psy1119 1225 FSFGGMVALELAIKLEQLGTKCHLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSI 1304 (1392)
Q Consensus 1225 ~S~Gg~VA~EmA~~Le~~G~~v~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 1304 (1392)
|||||.+|..+|.+.+ ...++++.. |...
T Consensus 116 ~S~Gg~va~~~a~~~~----~~~lil~ap-~~~~---------------------------------------------- 144 (218)
T d2fuka1 116 FSFGAYVSLRAAAALE----PQVLISIAP-PAGR---------------------------------------------- 144 (218)
T ss_dssp ETHHHHHHHHHHHHHC----CSEEEEESC-CBTT----------------------------------------------
T ss_pred Ecccchhhhhhhcccc----cceEEEeCC-cccc----------------------------------------------
Confidence 9999999998887642 225666532 2110
Q ss_pred ccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-CccccccChHHHHH-HHhhhcccCC
Q psy1119 1305 LKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHFTVLDNIKSAQI-IMHEDSTDFK 1376 (1392)
Q Consensus 1305 ~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~~ml~~~~~~~i-~~~l~~~L~~ 1376 (1392)
..+.. ....+|++++.+++|. ...+....|.+-...+.+++.+|| ||+|--..+.+... ...+++.|..
T Consensus 145 ~~~~~---~~~~~P~Lvi~G~~D~~vp~~~~~~l~~~~~~~~~l~~i~ga~H~f~~~~~~l~~~~~~~v~~~l~~ 216 (218)
T d2fuka1 145 WDFSD---VQPPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFHRKLIDLRGALQHGVRRWLPA 216 (218)
T ss_dssp BCCTT---CCCCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCTTCHHHHHHHHHHHHGGGCSS
T ss_pred hhhhc---cccccceeeEecCCCcCcCHHHHHHHHHHccCCceEEEeCCCCCCCCCCHHHHHHHHHHHHHHhcCC
Confidence 00111 1355799999999998 666666667655566778999997 89875333443333 3335555544
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=98.03 E-value=2.9e-06 Score=81.18 Aligned_cols=75 Identities=12% Similarity=0.100 Sum_probs=60.4
Q ss_pred CCCCceeEeecCCCccccccHHHHhhcCCceEEEecC------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1154 VGNNNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1154 ~g~~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
.|+++||+|+|+. +..|...|+....|+.++ .+.+..+.+++|++..+-++.. .-++.+++||||
T Consensus 18 ~G~G~pvlllHG~------~~~w~~~L~~~yrvi~~DlpG~G~S~~p~~s~~~~a~~i~~ll~~L---~i~~~~viG~S~ 88 (122)
T d2dsta1 18 VGKGPPVLLVAEE------ASRWPEALPEGYAFYLLDLPGYGRTEGPRMAPEELAHFVAGFAVMM---NLGAPWVLLRGL 88 (122)
T ss_dssp ECCSSEEEEESSS------GGGCCSCCCTTSEEEEECCTTSTTCCCCCCCHHHHHHHHHHHHHHT---TCCSCEEEECGG
T ss_pred EcCCCcEEEEecc------cccccccccCCeEEEEEeccccCCCCCcccccchhHHHHHHHHHHh---CCCCcEEEEeCc
Confidence 4677999999963 445778898888999886 3456789999999988888743 345678999999
Q ss_pred hHHHHHHHHH
Q psy1119 1228 GGMVALELAI 1237 (1392)
Q Consensus 1228 Gg~VA~EmA~ 1237 (1392)
||.||.++|.
T Consensus 89 Gg~ia~~laa 98 (122)
T d2dsta1 89 GLALGPHLEA 98 (122)
T ss_dssp GGGGHHHHHH
T ss_pred cHHHHHHHHh
Confidence 9999999887
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=97.86 E-value=3.8e-05 Score=84.55 Aligned_cols=128 Identities=19% Similarity=0.159 Sum_probs=90.3
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCcc
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVD 863 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~ 863 (1392)
+|||||+|=||.++++.|.++|. ++.+.++... +.+|++|.+.++++++.. .+|
T Consensus 3 ILItG~tGfiG~~l~~~L~~~g~--~v~~~~~~~~--------------------~~~Dl~~~~~~~~~i~~~----~~D 56 (298)
T d1n2sa_ 3 ILLFGKTGQVGWELQRSLAPVGN--LIALDVHSKE--------------------FCGDFSNPKGVAETVRKL----RPD 56 (298)
T ss_dssp EEEECTTSHHHHHHHHHTTTTSE--EEEECTTCSS--------------------SCCCTTCHHHHHHHHHHH----CCS
T ss_pred EEEECCCCHHHHHHHHHHHhCCC--EEEEECCCcc--------------------ccCcCCCHHHHHHHHHHc----CCC
Confidence 79999999999999999999984 4444444211 347999999999988765 579
Q ss_pred EEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCC-----------CChhHH
Q psy1119 864 GIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNA-----------GQTNYG 932 (1392)
Q Consensus 864 gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~-----------gq~~Ya 932 (1392)
.|||+||....... ...+ ...+..++.++.+|.+++... ...++++||.....+.. ....|+
T Consensus 57 ~Vih~Aa~~~~~~~-~~~~---~~~~~~n~~~~~~l~~~~~~~---~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~ 129 (298)
T d1n2sa_ 57 VIVNAAAHTAVDKA-ESEP---ELAQLLNATSVEAIAKAANET---GAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYG 129 (298)
T ss_dssp EEEECCCCCCHHHH-TTCH---HHHHHHHTHHHHHHHHHHTTT---TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHH
T ss_pred EEEEeccccccccc-ccCc---cccccccccccccchhhhhcc---ccccccccccccccCCCCCCCccccccCCCchHh
Confidence 99999986532221 2222 356678899999998887542 34667776655432211 235799
Q ss_pred HHHHHHHHHHHH
Q psy1119 933 MANSIMERICEA 944 (1392)
Q Consensus 933 aana~ld~la~~ 944 (1392)
.+|...+.+...
T Consensus 130 ~~k~~~e~~~~~ 141 (298)
T d1n2sa_ 130 KTKLAGEKALQD 141 (298)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhhhhhhhhHHh
Confidence 999888877654
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=97.79 E-value=0.0001 Score=80.83 Aligned_cols=150 Identities=17% Similarity=0.126 Sum_probs=95.7
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCccc--HHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKN--GYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~--~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
.+.+|||||+|-||..+++.|+++|.+ |+.++|+.... ......+..+...++ .++.+|+++.....+.++
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~---- 75 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHP-TFLLVRESTASSNSEKAQLLESFKASGA--NIVHGSIDDHASLVEAVK---- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCCCCTTTTHHHHHHHHHHHTTTC--EEECCCTTCHHHHHHHHH----
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEECCCccccchhHHHHHHhhccCCc--EEEEeecccchhhhhhhh----
Confidence 467999999999999999999999997 77777865432 223344555555564 457899999988776664
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIM 938 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~l 938 (1392)
..+.++|+++... +.++.++.++.... ....+++.||............|...+...
T Consensus 76 --~~~~vi~~~~~~~-------------------~~~~~~~~~a~~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 132 (307)
T d1qyca_ 76 --NVDVVISTVGSLQ-------------------IESQVNIIKAIKEV--GTVKRFFPSEFGNDVDNVHAVEPAKSVFEV 132 (307)
T ss_dssp --TCSEEEECCCGGG-------------------SGGGHHHHHHHHHH--CCCSEEECSCCSSCTTSCCCCTTHHHHHHH
T ss_pred --hceeeeecccccc-------------------cchhhHHHHHHHHh--ccccceeeeccccccccccccccccccccc
Confidence 4678999886432 12333444444332 345677777765555444444444333333
Q ss_pred -HHHHHHHHHcCCCeEEEEcccc
Q psy1119 939 -ERICEARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 939 -d~la~~r~~~Glp~~ai~~g~~ 960 (1392)
....++.+..|++...+..+.+
T Consensus 133 ~~~~~~~~~~~~~~~~i~r~~~v 155 (307)
T d1qyca_ 133 KAKVRRAIEAEGIPYTYVSSNCF 155 (307)
T ss_dssp HHHHHHHHHHHTCCBEEEECCEE
T ss_pred cccccchhhccCCCceeccccee
Confidence 2233344566888776666554
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.77 E-value=3.4e-05 Score=84.08 Aligned_cols=95 Identities=13% Similarity=0.145 Sum_probs=67.1
Q ss_pred ceeEeecCCCcccc---ccHHHHhhcC---CceEEEecCCCC---------CCCCHHHHHHHHHHHHhhhccCCCCcEEE
Q psy1119 1158 NTIFMVPGIEGIAT---VLEPLAKNIN---AQVLVFQFDHTN---------PPDTIPEMADSLLPHFKKRLVHGTDEIKL 1222 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~---~y~~La~~L~---~~~~v~~l~~e~---------~~~sieelA~~y~~~I~~~q~qp~gPy~L 1222 (1392)
.|++++|+.+|+.. .+..+++.|. +...|+.++-.. ....++++++...+.|++. ....+++.+
T Consensus 6 ~PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~~~~~~~~~~~e~v~~~I~~~-~~~~~~v~l 84 (279)
T d1ei9a_ 6 LPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKD-PKLQQGYNA 84 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHHHHHSCHHHHHHHHHHHHHSC-GGGTTCEEE
T ss_pred CcEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcccccccchhhhHHHHHHHHHHHHHhc-cccccceeE
Confidence 59999999998653 4666666664 346667665111 1346888899888888743 334567999
Q ss_pred EeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1223 VGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1223 ~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
+|||+||++|-.+++++. +.+| .|+-+.++.
T Consensus 85 VGhSqGGLiaR~~i~~~~--~~~V~~lITLgsPH 116 (279)
T d1ei9a_ 85 MGFSQGGQFLRAVAQRCP--SPPMVNLISVGGQH 116 (279)
T ss_dssp EEETTHHHHHHHHHHHCC--SSCEEEEEEESCCT
T ss_pred EEEccccHHHHHHHHHcC--CCCcceEEEECCCC
Confidence 999999999998887663 3456 677776643
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=97.76 E-value=5e-05 Score=79.57 Aligned_cols=148 Identities=15% Similarity=0.108 Sum_probs=87.3
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecCCC--------------CC---CCCHHHHHHHH---HHHHhhhccCC
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDHT--------------NP---PDTIPEMADSL---LPHFKKRLVHG 1216 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~~e--------------~~---~~sieelA~~y---~~~I~~~q~qp 1216 (1392)
.+.|+|+|+.||....|..+++.|.....++..+.. .. ...+.+.++.+ ++.+.+....+
T Consensus 23 ~p~vv~lHG~g~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~id 102 (209)
T d3b5ea1 23 RECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGLN 102 (209)
T ss_dssp CCEEEEECCTTBCTTTTHHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHhccCcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHHHHHHHHHHHHhCcc
Confidence 467899999999999999999999877666554310 00 01122222222 33333221113
Q ss_pred CCcEEEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHH
Q psy1119 1217 TDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAH 1295 (1392)
Q Consensus 1217 ~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~ 1295 (1392)
.....|+|||+||.+|+++|.+- .... .++++.+.++..
T Consensus 103 ~~ri~l~G~S~Gg~~a~~~a~~~---p~~~~~~v~~~g~~~~~------------------------------------- 142 (209)
T d3b5ea1 103 LDHATFLGYSNGANLVSSLMLLH---PGIVRLAALLRPMPVLD------------------------------------- 142 (209)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHS---TTSCSEEEEESCCCCCS-------------------------------------
T ss_pred cCCEEEEeeCChHHHHHHHHHhC---CCcceEEEEeCCccccc-------------------------------------
Confidence 34578999999999999999552 2233 556664433210
Q ss_pred HHHHHHHhhccccCCCCCcccceEEEEeeCCCCCCChhhcCccc---ccCCCeEEEEEccCccc
Q psy1119 1296 AAYKRITSILKYTDPKHKAFGGNITLLRPTEQALPTAEDYGLSK---VCKKPVKVHFVDGNHFT 1356 (1392)
Q Consensus 1296 ~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~~~~~~~~~W~~---~~~g~v~v~~v~G~H~~ 1356 (1392)
..+ .....+.|+.++.+++|.........+.+ -...+++.+.++|+|..
T Consensus 143 -----------~~~-~~~~~~~p~~~~~G~~D~~~~~~~~~~~~~l~~~G~~v~~~~~~ggH~i 194 (209)
T d3b5ea1 143 -----------HVP-ATDLAGIRTLIIAGAADETYGPFVPALVTLLSRHGAEVDARIIPSGHDI 194 (209)
T ss_dssp -----------SCC-CCCCTTCEEEEEEETTCTTTGGGHHHHHHHHHHTTCEEEEEEESCCSCC
T ss_pred -----------ccc-ccccccchheeeeccCCCccCHHHHHHHHHHHHCCCCeEEEEECCCCCC
Confidence 000 01134579999999998732222222222 12456899999999953
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=97.71 E-value=0.00012 Score=79.92 Aligned_cols=138 Identities=18% Similarity=0.126 Sum_probs=97.1
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCcc
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVD 863 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~ 863 (1392)
+|||||+|-||..++++|.++|.. |+.++|+. +|++|.++++++++.. ..|
T Consensus 4 IlItGasGfiG~~l~~~L~~~g~~-Vi~~~r~~------------------------~D~~d~~~~~~~l~~~----~~d 54 (281)
T d1vl0a_ 4 ILITGANGQLGREIQKQLKGKNVE-VIPTDVQD------------------------LDITNVLAVNKFFNEK----KPN 54 (281)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSEE-EEEECTTT------------------------CCTTCHHHHHHHHHHH----CCS
T ss_pred EEEECCCCHHHHHHHHHHHhCCCE-EEEeechh------------------------ccCCCHHHHHHHHHHc----CCC
Confidence 799999999999999999999997 77777752 4999999999888765 578
Q ss_pred EEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc-----------CCCCChhHH
Q psy1119 864 GIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR-----------GNAGQTNYG 932 (1392)
Q Consensus 864 gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~-----------G~~gq~~Ya 932 (1392)
.|||+|+...... +..........++..+.++....... ...++..||....- .......|+
T Consensus 55 ~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~---~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~ 127 (281)
T d1vl0a_ 55 VVINCAAHTAVDK----CEEQYDLAYKINAIGPKNLAAAAYSV---GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYG 127 (281)
T ss_dssp EEEECCCCCCHHH----HHHCHHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHH
T ss_pred EEEeecccccccc----ccccchhhcccccccccccccccccc---cccccccccceeeeccccccccccccccchhhhh
Confidence 9999998643211 12223455666777777776665442 34566666653221 123456798
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEEcccc
Q psy1119 933 MANSIMERICEARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 933 aana~ld~la~~r~~~Glp~~ai~~g~~ 960 (1392)
.++...+.+++ ..+.+...+..+.+
T Consensus 128 ~~k~~~e~~~~---~~~~~~~i~R~~~v 152 (281)
T d1vl0a_ 128 KTKLEGENFVK---ALNPKYYIVRTAWL 152 (281)
T ss_dssp HHHHHHHHHHH---HHCSSEEEEEECSE
T ss_pred hhhhHHHHHHH---HhCCCccccceeEE
Confidence 88888776664 45778777777665
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.67 E-value=0.00029 Score=75.69 Aligned_cols=191 Identities=17% Similarity=0.211 Sum_probs=95.3
Q ss_pred CceeEeecCCC-----ccccccHHHH----hhcC-CceEEEecC-----CCCCCCCHHHHHHHHHHHHhhhccCCCCcEE
Q psy1119 1157 NNTIFMVPGIE-----GIATVLEPLA----KNIN-AQVLVFQFD-----HTNPPDTIPEMADSLLPHFKKRLVHGTDEIK 1221 (1392)
Q Consensus 1157 ~~pLF~vp~ag-----G~~~~y~~La----~~L~-~~~~v~~l~-----~e~~~~sieelA~~y~~~I~~~q~qp~gPy~ 1221 (1392)
++.++++|++| ++...|..++ +.+. ..+.++.++ ....+..+++..+.+-. +++. . +..+..
T Consensus 31 ~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~~~~~~d~~~~~~~-l~~~-~-~~~~i~ 107 (263)
T d1vkha_ 31 REAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNPRNLYDAVSNITR-LVKE-K-GLTNIN 107 (263)
T ss_dssp CEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTTHHHHHHHHHHHH-HHHH-H-TCCCEE
T ss_pred CcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchhhhHHHHhhhhhhhc-cccc-c-ccccee
Confidence 46688999853 2344555544 4443 346666654 12223445555544433 3323 1 456899
Q ss_pred EEeechhHHHHHHHHHHHHHcCCcc---------------EEEEEeCCCCCCccc-cCCCCChHHHHHHHHhcCCccccC
Q psy1119 1222 LVGFSFGGMVALELAIKLEQLGTKC---------------HLYLVDSAPDYVLTS-LRKLPDWNAKLNYFLDLMPEDATH 1285 (1392)
Q Consensus 1222 L~G~S~Gg~VA~EmA~~Le~~G~~v---------------~LvLiD~~p~~~~~~-l~~~~~~~~~l~~~~~~~~~~~~~ 1285 (1392)
|+|||+||.+|..+|..+...+... ..+..++. +.... ....+.....+...+.........
T Consensus 108 l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (263)
T d1vkha_ 108 MVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGI--YSLKELLIEYPEYDCFTRLAFPDGIQMYEE 185 (263)
T ss_dssp EEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCC--CCHHHHHHHCGGGHHHHHHHCTTCGGGCCC
T ss_pred eeccCcHHHHHHHHHHhccCcccccccccccccccccccccccccccc--ccchhhhhhccccchhhhcccccccccccc
Confidence 9999999999999987765443221 11122211 10000 001111122222221111111111
Q ss_pred CHHHHHHHHHHHHHHHHhhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccc---cCCCeEEEEEcc-CccccccC
Q psy1119 1286 SRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKV---CKKPVKVHFVDG-NHFTVLDN 1360 (1392)
Q Consensus 1286 ~~~~l~~~~~~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~---~~g~v~v~~v~G-~H~~ml~~ 1360 (1392)
...... ...... ..+...|++++.+++|. .+......+.+. ...+++++.++| +|....++
T Consensus 186 ~~~~~~---~~~~~~-----------~~~~~~P~lii~G~~D~~vp~~~s~~l~~~L~~~g~~~~~~~~~~~~H~~~~~~ 251 (263)
T d1vkha_ 186 EPSRVM---PYVKKA-----------LSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN 251 (263)
T ss_dssp CHHHHH---HHHHHH-----------HHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC
T ss_pred cccccC---cccccc-----------ccccCCCeeeeecCCCcccCHHHHHHHHHHHHHCCCCEEEEEECCCCchhhhcC
Confidence 111100 000000 11456799999999987 554444333322 234688999996 59888888
Q ss_pred hHHHHH
Q psy1119 1361 IKSAQI 1366 (1392)
Q Consensus 1361 ~~~~~i 1366 (1392)
..+...
T Consensus 252 ~~~~~~ 257 (263)
T d1vkha_ 252 GKVAKY 257 (263)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 765543
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=97.64 E-value=0.00022 Score=78.67 Aligned_cols=150 Identities=12% Similarity=0.025 Sum_probs=94.3
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCccc-HHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKN-GYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~-~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
+.+|||||+|-||..+++.|+++|.. |+.++|+.... .........+...++ .++.+|++|.+.+.++++
T Consensus 4 ~KILVtGatG~iG~~l~~~L~~~G~~-V~~~~R~~~~~~~~~~~~~~~~~~~~v--~~v~~d~~d~~~~~~~~~------ 74 (312)
T d1qyda_ 4 SRVLIVGGTGYIGKRIVNASISLGHP-TYVLFRPEVVSNIDKVQMLLYFKQLGA--KLIEASLDDHQRLVDALK------ 74 (312)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCSCCSSCHHHHHHHHHHHTTTC--EEECCCSSCHHHHHHHHT------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCE-EEEEECCCcccchhHHHHHhhhccCCc--EEEEeecccchhhhhhcc------
Confidence 45899999999999999999999986 77778865432 223344455556664 567899999988876654
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC-----CCChhHHHHH
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN-----AGQTNYGMAN 935 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~-----~gq~~Yaaan 935 (1392)
..+.+|++++.... ..+..++.++..++... ....+|++||....... .....|..++
T Consensus 75 ~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~a~~~--~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~ 137 (312)
T d1qyda_ 75 QVDVVISALAGGVL---------------SHHILEQLKLVEAIKEA--GNIKRFLPSEFGMDPDIMEHALQPGSITFIDK 137 (312)
T ss_dssp TCSEEEECCCCSSS---------------STTTTTHHHHHHHHHHS--CCCSEEECSCCSSCTTSCCCCCSSTTHHHHHH
T ss_pred Ccchhhhhhhhccc---------------ccchhhhhHHHHHHHHh--cCCcEEEEeeccccCCCcccccchhhhhhHHH
Confidence 46788888764321 11222344444444332 33567778876543221 1223455555
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcccc
Q psy1119 936 SIMERICEARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 936 a~ld~la~~r~~~Glp~~ai~~g~~ 960 (1392)
.....+ .+..|++...+..+.+
T Consensus 138 ~~~~~~---~~~~~~~~~i~r~~~~ 159 (312)
T d1qyda_ 138 RKVRRA---IEAASIPYTYVSSNMF 159 (312)
T ss_dssp HHHHHH---HHHTTCCBCEEECCEE
T ss_pred HHHHHh---hcccccceEEecccee
Confidence 555443 4457888777766654
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.62 E-value=0.00018 Score=75.22 Aligned_cols=145 Identities=14% Similarity=0.163 Sum_probs=96.3
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCc-eEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGAR-KLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr-~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
|.+|||||+|-||.++++.|.++|.. +|+.++|+..... .+ +..++.|..++. + ...+
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~-------------~~---~~~~~~d~~~~~---~--~~~~ 61 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH-------------PR---LDNPVGPLAELL---P--QLDG 61 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC-------------TT---EECCBSCHHHHG---G--GCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc-------------cc---ccccccchhhhh---h--cccc
Confidence 78999999999999999999999974 4677777643210 11 234555543321 1 2245
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCCCCChhHHHHHHHHHH
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGNAGQTNYGMANSIMER 940 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~~gq~~Yaaana~ld~ 940 (1392)
.+|.|||++|..... .... ....+.++.++.++.+++... ...+||++||..+. ......|..+|...+.
T Consensus 62 ~~d~vi~~~g~~~~~---~~~~---~~~~~~~~~~~~~~~~~a~~~--~v~~~i~~Ss~~~~--~~~~~~y~~~K~~~E~ 131 (212)
T d2a35a1 62 SIDTAFCCLGTTIKE---AGSE---EAFRAVDFDLPLAVGKRALEM--GARHYLVVSALGAD--AKSSIFYNRVKGELEQ 131 (212)
T ss_dssp CCSEEEECCCCCHHH---HSSH---HHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCC--TTCSSHHHHHHHHHHH
T ss_pred chheeeeeeeeeccc---cccc---cccccchhhhhhhcccccccc--cccccccccccccc--cccccchhHHHHHHhh
Confidence 789999999864211 1122 345667888999998887653 56789999987553 2345679999988776
Q ss_pred HHHHHHHcCCC-eEEEEcccc
Q psy1119 941 ICEARRAEGLP-GLAVEWGAV 960 (1392)
Q Consensus 941 la~~r~~~Glp-~~ai~~g~~ 960 (1392)
..+ +.+.| .+-+..+.+
T Consensus 132 ~l~---~~~~~~~~I~Rp~~v 149 (212)
T d2a35a1 132 ALQ---EQGWPQLTIARPSLL 149 (212)
T ss_dssp HHT---TSCCSEEEEEECCSE
T ss_pred hcc---ccccccceeeCCcce
Confidence 543 45776 444455544
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=97.59 E-value=6.8e-05 Score=83.53 Aligned_cols=101 Identities=12% Similarity=0.094 Sum_probs=66.7
Q ss_pred CCCCceeEeecCCCcccc--ccHHHHhhcCCc-eEEEecC-CCCCCCCHHHHHHHHHHHHhhhc-cCCCCcEEEEeechh
Q psy1119 1154 VGNNNTIFMVPGIEGIAT--VLEPLAKNINAQ-VLVFQFD-HTNPPDTIPEMADSLLPHFKKRL-VHGTDEIKLVGFSFG 1228 (1392)
Q Consensus 1154 ~g~~~pLF~vp~agG~~~--~y~~La~~L~~~-~~v~~l~-~e~~~~sieelA~~y~~~I~~~q-~qp~gPy~L~G~S~G 1228 (1392)
.+.+.||+++|+.+++.. .|..|+++|... +.++.++ ......+++..++++.+.|+... ..+..+..|+|||||
T Consensus 28 ~~~~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~~~sae~la~~i~~v~~~~g~~kV~lVGhS~G 107 (317)
T d1tcaa_ 28 SSVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQVNTEYMVNAITALYAGSGNNKLPVLTWSQG 107 (317)
T ss_dssp TSCSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCHHHHHHHHHHHHHHHHHHTTSCCEEEEEETHH
T ss_pred CCCCCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCchHhHHHHHHHHHHHHHHhccCCceEEEEeCch
Confidence 344579999999887653 466788888643 6666665 22234556655554444443210 225578999999999
Q ss_pred HHHHHHHHHHHHHcCCcc-EEEEEeCC
Q psy1119 1229 GMVALELAIKLEQLGTKC-HLYLVDSA 1254 (1392)
Q Consensus 1229 g~VA~EmA~~Le~~G~~v-~LvLiD~~ 1254 (1392)
|++|.+.++++-.....| .++.+.++
T Consensus 108 G~~a~~~l~~~p~~~~~V~~~v~i~~~ 134 (317)
T d1tcaa_ 108 GLVAQWGLTFFPSIRSKVDRLMAFAPD 134 (317)
T ss_dssp HHHHHHHHHHCGGGTTTEEEEEEESCC
T ss_pred HHHHHHHHHHCCCcchheeEEEEeCCC
Confidence 999999988765544456 67777553
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=97.57 E-value=9.7e-05 Score=85.34 Aligned_cols=95 Identities=13% Similarity=-0.031 Sum_probs=71.5
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCCc-------eEEEecC------CCCC----CCCHHHHHHHHHHHHhhhccCCC
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINAQ-------VLVFQFD------HTNP----PDTIPEMADSLLPHFKKRLVHGT 1217 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~~-------~~v~~l~------~e~~----~~sieelA~~y~~~I~~~q~qp~ 1217 (1392)
+.++||+|+||-.|+...|+++...|..+ ..|+... .+.| .-++.++|+.+...|... ..
T Consensus 104 ~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~~~y~~~~~a~~~~~l~~~l---g~ 180 (394)
T d1qo7a_ 104 EDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKDFGLMDNARVVDQLMKDL---GF 180 (394)
T ss_dssp TTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSSSCCCHHHHHHHHHHHHHHT---TC
T ss_pred CCCCEEEEeccccccHHHHHHHHHhhccccCCcccceeeecccccccCCCCCCCCCCccCHHHHHHHHHHHHhhc---cC
Confidence 34589999999999999999999998754 6677754 2222 357999999998888743 45
Q ss_pred CcEEEEeechhHHHHHHHHHHHHHcCCccEEEEEeCC
Q psy1119 1218 DEIKLVGFSFGGMVALELAIKLEQLGTKCHLYLVDSA 1254 (1392)
Q Consensus 1218 gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v~LvLiD~~ 1254 (1392)
..++++|||+||.++..+|.+.-.. ...+++++..
T Consensus 181 ~~~~~vg~~~Gg~v~~~~a~~~p~~--~~~~~l~~~~ 215 (394)
T d1qo7a_ 181 GSGYIIQGGDIGSFVGRLLGVGFDA--CKAVHLNLCA 215 (394)
T ss_dssp TTCEEEEECTHHHHHHHHHHHHCTT--EEEEEESCCC
T ss_pred cceEEEEecCchhHHHHHHHHhhcc--ccceeEeeec
Confidence 5788999999999999998875432 2255555553
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=97.57 E-value=4.8e-05 Score=85.50 Aligned_cols=93 Identities=13% Similarity=0.258 Sum_probs=67.0
Q ss_pred CceeEeecCCCcccc------ccHHHHhhcCCc-eEEEecC------CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEE
Q psy1119 1157 NNTIFMVPGIEGIAT------VLEPLAKNINAQ-VLVFQFD------HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLV 1223 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~------~y~~La~~L~~~-~~v~~l~------~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~ 1223 (1392)
+.||+++|+.+|+.. .|..++..|... ..|+.++ .+.+..+.+++++...+.++ .. +..+++|+
T Consensus 8 k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~~~~~~l~~~i~~~~~-~~--~~~~v~lv 84 (319)
T d1cvla_ 8 RYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVKQVLA-AT--GATKVNLI 84 (319)
T ss_dssp SSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTTSHHHHHHHHHHHHHH-HH--CCSCEEEE
T ss_pred CCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccHHHHHHHHHHHHH-Hh--CCCCEEEE
Confidence 468999999999765 367788888654 5566554 23455678888877655554 32 56789999
Q ss_pred eechhHHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1224 GFSFGGMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1224 G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
||||||++|..+|.+.. +.+ .++++.++.
T Consensus 85 GhS~GG~~~~~~~~~~p---~~v~~vv~i~~p~ 114 (319)
T d1cvla_ 85 GHSQGGLTSRYVAAVAP---QLVASVTTIGTPH 114 (319)
T ss_dssp EETTHHHHHHHHHHHCG---GGEEEEEEESCCT
T ss_pred eccccHHHHHHHHHHCc---cccceEEEECCCC
Confidence 99999999998887543 345 788886643
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.55 E-value=0.00021 Score=78.73 Aligned_cols=157 Identities=14% Similarity=0.172 Sum_probs=98.6
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCcc
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPVD 863 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I~ 863 (1392)
+|||||+|=||..++++|+++|...|+.+.+-..... .. . +... ..+|..+.+.....+.....+..++
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~-~~---~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV---N-LVDL------NIADYMDKEDFLIQIMAGEEFGDVE 70 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GH---H-HHTS------CCSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcch-hh---c-cccc------chhhhccchHHHHHHhhhhcccchh
Confidence 6999999999999999999999755665532111111 11 1 1111 1234444454443333334567899
Q ss_pred EEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC-----------CCChhHH
Q psy1119 864 GIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN-----------AGQTNYG 932 (1392)
Q Consensus 864 gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~-----------~gq~~Ya 932 (1392)
.|+|.|+..... .... ......++.++.++.++..... . .||++||.....+. .....|+
T Consensus 71 ~i~~~aa~~~~~---~~~~---~~~~~~~~~~~~~~l~~~~~~~--i-~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~ 141 (307)
T d1eq2a_ 71 AIFHEGACSSTT---EWDG---KYMMDNNYQYSKELLHYCLERE--I-PFLYASSAATYGGRTSDFIESREYEKPLNVYG 141 (307)
T ss_dssp EEEECCSCCCTT---CCCH---HHHHHHTHHHHHHHHHHHHHHT--C-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHH
T ss_pred hhhhhccccccc---cccc---cccccccccccccccccccccc--c-cccccccccccccccccccccccccccccccc
Confidence 999999753322 1122 3345666778888877765542 2 36666666555443 3467899
Q ss_pred HHHHHHHHHHHHHHHc-CCCeEEEEcccc
Q psy1119 933 MANSIMERICEARRAE-GLPGLAVEWGAV 960 (1392)
Q Consensus 933 aana~ld~la~~r~~~-Glp~~ai~~g~~ 960 (1392)
.+|...+.+++....+ |++.+.+....+
T Consensus 142 ~~K~~~e~~~~~~~~~~~~~~~~~r~~~v 170 (307)
T d1eq2a_ 142 YSKFLFDEYVRQILPEANSQIVGFRYFNV 170 (307)
T ss_dssp HHHHHHHHHHHHHGGGCSSCEEEEEECEE
T ss_pred cccchhhhhccccccccccccccccceeE
Confidence 9999999999876554 888887777654
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=97.45 E-value=0.00076 Score=76.13 Aligned_cols=147 Identities=16% Similarity=0.069 Sum_probs=93.4
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHH-HHHHHHHhh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGV-VNLLTEANK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v-~~l~~~~~~ 858 (1392)
..|+++||||+|-||.++++.|.++|.+ |+.+.|+..+... . ......| +.++.+|++|..++ ..+
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~-V~~l~R~~~~~~~-~---~~~~~~~--v~~~~gD~~d~~~~~~~a------ 68 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHH-VRAQVHSLKGLIA-E---ELQAIPN--VTLFQGPLLNNVPLMDTL------ 68 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCSCSHHH-H---HHHTSTT--EEEEESCCTTCHHHHHHH------
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCe-EEEEECCcchhhh-h---hhcccCC--CEEEEeeCCCcHHHHHHH------
Confidence 4689999999999999999999999997 7777887543221 1 1112234 56778999996543 222
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccc--cCCCCChhHHHHHH
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCG--RGNAGQTNYGMANS 936 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~--~G~~gq~~Yaaana 936 (1392)
+..++.++++..... ..++..+.++..++... ....+|.+||+... .+......|..+|.
T Consensus 69 ~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~aa~~a--gv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~ 130 (350)
T d1xgka_ 69 FEGAHLAFINTTSQA----------------GDEIAIGKDLADAAKRA--GTIQHYIYSSMPDHSLYGPWPAVPMWAPKF 130 (350)
T ss_dssp HTTCSEEEECCCSTT----------------SCHHHHHHHHHHHHHHH--SCCSEEEEEECCCGGGTSSCCCCTTTHHHH
T ss_pred hcCCceEEeeccccc----------------chhhhhhhHHHHHHHHh--CCCceEEEeeccccccCCcccchhhhhhHH
Confidence 335677776643211 11233455555555433 34567888886644 34445567777776
Q ss_pred HHHHHHHHHHHcCCCeEEEEcccc
Q psy1119 937 IMERICEARRAEGLPGLAVEWGAV 960 (1392)
Q Consensus 937 ~ld~la~~r~~~Glp~~ai~~g~~ 960 (1392)
..+.+ .++.+.+...+..+.+
T Consensus 131 ~~~~~---~~~~~~~~~~vr~~~~ 151 (350)
T d1xgka_ 131 TVENY---VRQLGLPSTFVYAGIY 151 (350)
T ss_dssp HHHHH---HHTSSSCEEEEEECEE
T ss_pred HHHHH---HHhhccCceeeeecee
Confidence 66554 4456788777766654
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=97.37 E-value=0.00024 Score=73.42 Aligned_cols=82 Identities=20% Similarity=0.275 Sum_probs=52.5
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecCC--------------CCCCCCHHH---HHHHH---HHHHhhhccCC
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFDH--------------TNPPDTIPE---MADSL---LPHFKKRLVHG 1216 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~~--------------e~~~~siee---lA~~y---~~~I~~~q~qp 1216 (1392)
+|-|+++|+.||+...|..+++.+.....++..+. .....+.++ .++.+ +..+.+..-..
T Consensus 14 ~P~vi~lHG~g~~~~~~~~~~~~l~~~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~d 93 (202)
T d2h1ia1 14 KPVLLLLHGTGGNELDLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKEYKFD 93 (202)
T ss_dssp SCEEEEECCTTCCTTTTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhccCCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 35689999999999999999999987776665430 001112222 22222 22222221113
Q ss_pred CCcEEEEeechhHHHHHHHHHH
Q psy1119 1217 TDEIKLVGFSFGGMVALELAIK 1238 (1392)
Q Consensus 1217 ~gPy~L~G~S~Gg~VA~EmA~~ 1238 (1392)
.....++|||+||.+|+.+|.+
T Consensus 94 ~~~i~~~G~S~Gg~~a~~la~~ 115 (202)
T d2h1ia1 94 RNNIVAIGYSNGANIAASLLFH 115 (202)
T ss_dssp TTCEEEEEETHHHHHHHHHHHH
T ss_pred ccceeeecccccchHHHHHHHh
Confidence 4467899999999999998864
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.36 E-value=0.00038 Score=71.95 Aligned_cols=145 Identities=10% Similarity=0.096 Sum_probs=86.8
Q ss_pred CceeEeecCCCccccccHHHHhhcCCceEEEecC--------------CCCCCCCHHHH---HH---HHHHHHhhhccCC
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINAQVLVFQFD--------------HTNPPDTIPEM---AD---SLLPHFKKRLVHG 1216 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~~~~v~~l~--------------~e~~~~sieel---A~---~y~~~I~~~q~qp 1216 (1392)
+|.|+++|+.||....|.++++.|.....++..+ ......+.+++ ++ .+++..... . +
T Consensus 17 ~P~vi~lHG~G~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~-~ 94 (203)
T d2r8ba1 17 APLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREH-Y-Q 94 (203)
T ss_dssp SCEEEEECCTTCCHHHHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHH-H-T
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhccCCeEEEeccccccccccccccccCccccchhHHHHHHHHHHHHHHHhhhc-C-C
Confidence 4668999999999999999999998776666543 01111222222 22 223333322 2 4
Q ss_pred CCcEEEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHH
Q psy1119 1217 TDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAH 1295 (1392)
Q Consensus 1217 ~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~ 1295 (1392)
..+..++|||+||.+|+++|... .... .+++..+..+....
T Consensus 95 ~~~v~l~G~S~Gg~~a~~~a~~~---p~~~~~~~~~~~~~~~~~~----------------------------------- 136 (203)
T d2r8ba1 95 AGPVIGLGFSNGANILANVLIEQ---PELFDAAVLMHPLIPFEPK----------------------------------- 136 (203)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHS---TTTCSEEEEESCCCCSCCC-----------------------------------
T ss_pred CceEEEEEecCHHHHHHHHHHhh---hhcccceeeeccccccccc-----------------------------------
Confidence 45799999999999999988743 2223 55555543321100
Q ss_pred HHHHHHHhhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccc---cCCCeEEEEEccCcc
Q psy1119 1296 AAYKRITSILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKV---CKKPVKVHFVDGNHF 1355 (1392)
Q Consensus 1296 ~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~---~~g~v~v~~v~G~H~ 1355 (1392)
+.+. ....|+.++.+++|. +..+......+. ...+++++.++|+|-
T Consensus 137 -----------~~~~---~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~~~ggH~ 186 (203)
T d2r8ba1 137 -----------ISPA---KPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPGGHE 186 (203)
T ss_dssp -----------CCCC---CTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESSCSS
T ss_pred -----------cccc---cccchhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCc
Confidence 0111 334578889999987 443332222211 234688999999997
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.28 E-value=0.0001 Score=81.22 Aligned_cols=96 Identities=17% Similarity=0.226 Sum_probs=67.2
Q ss_pred CCceeEeecCCCcccc-----ccHHHHhhcCCc-eEEEecCCCCCCCCHHHHHHHHHHHHhhhc-cCCCCcEEEEeechh
Q psy1119 1156 NNNTIFMVPGIEGIAT-----VLEPLAKNINAQ-VLVFQFDHTNPPDTIPEMADSLLPHFKKRL-VHGTDEIKLVGFSFG 1228 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~~-----~y~~La~~L~~~-~~v~~l~~e~~~~sieelA~~y~~~I~~~q-~qp~gPy~L~G~S~G 1228 (1392)
++.||+++|+.+|... .|..+++.|... ..|+...- ++..+++.-|+.+.+.|.... ..+..+++|+|||||
T Consensus 6 ~~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~-~~~~~~~~~a~~l~~~i~~~~~~~g~~~v~ligHS~G 84 (285)
T d1ex9a_ 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEV-SQLDTSEVRGEQLLQQVEEIVALSGQPKVNLIGHSHG 84 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECC-CSSSCHHHHHHHHHHHHHHHHHHHCCSCEEEEEETTH
T ss_pred CCCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEECcc
Confidence 4579999999998753 367788887654 56666542 345677777777766664321 125568999999999
Q ss_pred HHHHHHHHHHHHHcCCcc-EEEEEeCCC
Q psy1119 1229 GMVALELAIKLEQLGTKC-HLYLVDSAP 1255 (1392)
Q Consensus 1229 g~VA~EmA~~Le~~G~~v-~LvLiD~~p 1255 (1392)
|++|..++.+.. +.+ .|+.+.+++
T Consensus 85 G~~~r~~~~~~p---~~v~~lv~i~tPh 109 (285)
T d1ex9a_ 85 GPTIRYVAAVRP---DLIASATSVGAPH 109 (285)
T ss_dssp HHHHHHHHHHCG---GGEEEEEEESCCT
T ss_pred HHHHHHHHHHCC---ccceeEEEECCCC
Confidence 999999888653 345 788887643
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=97.24 E-value=0.0012 Score=74.94 Aligned_cols=198 Identities=13% Similarity=0.087 Sum_probs=100.5
Q ss_pred ceeEeecCCCccccccHHHHhhcCC-ceEEEecC----C-----CCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeech
Q psy1119 1158 NTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD----H-----TNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSF 1227 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~----~-----e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~ 1227 (1392)
|.|+++|+.+|....|..+++.|.. .+.++.++ + .......+..+...++.+....--...+..|+||||
T Consensus 132 P~Vi~~hG~~~~~e~~~~~~~~l~~~G~~vl~~D~~G~G~s~~~~~~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~ 211 (360)
T d2jbwa1 132 PAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSL 211 (360)
T ss_dssp EEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETH
T ss_pred eEEEEeCCCCccHHHHHHHHHHHHhcCCEEEEEccccccccCccccccccHHHHHHHHHHHHHhcccccccceeehhhhc
Confidence 4578999999988888888888764 57788875 1 112345666665555555422000234688999999
Q ss_pred hHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccCCHHHHHHHHHHHHHHHHhhcc
Q psy1119 1228 GGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHSRTYQRNLAHAAYKRITSILK 1306 (1392)
Q Consensus 1228 Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1306 (1392)
||.+|..+|.. ..++ .++.+++......... ..+......... ... ...+.. .......
T Consensus 212 GG~~Al~~A~~----~pri~a~V~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~---~~~~~~---------~~~~~~~ 271 (360)
T d2jbwa1 212 GGNYALKSAAC----EPRLAACISWGGFSDLDYWDL-ETPLTKESWKYV---SKV---DTLEEA---------RLHVHAA 271 (360)
T ss_dssp HHHHHHHHHHH----CTTCCEEEEESCCSCSTTGGG-SCHHHHHHHHHH---TTC---SSHHHH---------HHHHHHH
T ss_pred ccHHHHHHhhc----CCCcceEEEEcccccHHHHhh-hhhhhhHHHHHh---ccC---CchHHH---------HHHHHhh
Confidence 99999988752 1234 4444444322211111 000001111111 110 011110 0111111
Q ss_pred ccCC-CCCcccceEEEEeeCCCCCCChhhcCc-ccccCCCeEEEEEc-cCccccccChHHH-HHHHhhhcccC
Q psy1119 1307 YTDP-KHKAFGGNITLLRPTEQALPTAEDYGL-SKVCKKPVKVHFVD-GNHFTVLDNIKSA-QIIMHEDSTDF 1375 (1392)
Q Consensus 1307 y~~~-~~~~~~~pi~l~~a~~~~~~~~~~~~W-~~~~~g~v~v~~v~-G~H~~ml~~~~~~-~i~~~l~~~L~ 1375 (1392)
+... ...++++|++++.++.|.......... +.....+.++..++ |+|......+... .+..-+.+.|.
T Consensus 272 ~~~~~~~~~i~~P~Lii~G~~D~vp~~~~~~l~~~~~~~~~~l~~~~~g~H~~~~~~~~~~~~i~dWl~~~L~ 344 (360)
T d2jbwa1 272 LETRDVLSQIACPTYILHGVHDEVPLSFVDTVLELVPAEHLNLVVEKDGDHCCHNLGIRPRLEMADWLYDVLV 344 (360)
T ss_dssp TCCTTTGGGCCSCEEEEEETTSSSCTHHHHHHHHHSCGGGEEEEEETTCCGGGGGGTTHHHHHHHHHHHHHHT
T ss_pred cchhhhHhhCCCCEEEEEeCCCCcCHHHHHHHHHhcCCCCeEEEEECCCCcCCCcChHHHHHHHHHHHHHHhc
Confidence 2211 134788999999999886433333222 22333456677776 5675443333322 33334555553
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=97.19 E-value=0.0012 Score=69.16 Aligned_cols=149 Identities=13% Similarity=0.066 Sum_probs=80.3
Q ss_pred ceeEeecCCCccccccHHHHhhcCCc---eEEEecC-----------------------CCCCCCCHHHH---HHHHHHH
Q psy1119 1158 NTIFMVPGIEGIATVLEPLAKNINAQ---VLVFQFD-----------------------HTNPPDTIPEM---ADSLLPH 1208 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~~y~~La~~L~~~---~~v~~l~-----------------------~e~~~~sieel---A~~y~~~ 1208 (1392)
+.|+++|+.|++...|..+++.|... +.++..+ ........+++ ...+.+.
T Consensus 15 ~~Vi~lHG~G~~~~~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~v~~l 94 (218)
T d1auoa_ 15 ACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVTDL 94 (218)
T ss_dssp EEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCCChhhHHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHHHHHHHHHH
Confidence 46789999999999999988887532 2222110 01111233333 2222222
Q ss_pred Hh---hhccCCCCcEEEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCcccc
Q psy1119 1209 FK---KRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDAT 1284 (1392)
Q Consensus 1209 I~---~~q~qp~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~ 1284 (1392)
|+ +..+ +.....++|||+||.+|+.+|.. ...... .++.+.+..+...... .
T Consensus 95 i~~~~~~~i-~~~ri~l~GfSqGg~~a~~~~l~--~~~~~~~~~v~~~g~~~~~~~~~---~------------------ 150 (218)
T d1auoa_ 95 IEAQKRTGI-DASRIFLAGFSQGGAVVFHTAFI--NWQGPLGGVIALSTYAPTFGDEL---E------------------ 150 (218)
T ss_dssp HHHHHHTTC-CGGGEEEEEETHHHHHHHHHHHT--TCCSCCCEEEEESCCCTTCCTTC---C------------------
T ss_pred HHHHHHhCC-CCcceEEeeeCcchHHHHHHHHh--cccccceeeeeccccCccccccc---c------------------
Confidence 21 1111 33578999999999999988732 222223 5555555432210000 0
Q ss_pred CCHHHHHHHHHHHHHHHHhhccccCCCCCcccceEEEEeeCCCC-CCChhhcCcccc---cCCCeEEEEEccCcc
Q psy1119 1285 HSRTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQA-LPTAEDYGLSKV---CKKPVKVHFVDGNHF 1355 (1392)
Q Consensus 1285 ~~~~~l~~~~~~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~---~~g~v~v~~v~G~H~ 1355 (1392)
.... .-+.|+.++.+++|. +..+......+. ..-+++++.++|+|.
T Consensus 151 ~~~~-------------------------~~~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~gH~ 200 (218)
T d1auoa_ 151 LSAS-------------------------QQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYPMGHE 200 (218)
T ss_dssp CCHH-------------------------HHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESCSSS
T ss_pred cchh-------------------------ccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCCEEEEEECCCCc
Confidence 0000 123589999999987 443322222221 233689999999995
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=97.09 E-value=0.00053 Score=70.57 Aligned_cols=90 Identities=19% Similarity=0.185 Sum_probs=62.4
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCC--cCceeeCCCccHHHHH
Q psy1119 553 AVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIK--EENIGNSRDTSFEQLV 630 (1392)
Q Consensus 553 A~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~--~~~i~~s~~~~~~~~i 630 (1392)
++......+.--+|.+|||.||+||+|.++.+.+...|++|+.+.++.++.+.+.+.++.-. .....+..+. +.+
T Consensus 10 v~~~~~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~ 86 (191)
T d1luaa1 10 VALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD---ASR 86 (191)
T ss_dssp HHHHHHHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH---HHH
T ss_pred HHHHHHHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccH---HHH
Confidence 33333333444589999999999999999999999999999999999988877765432111 1122343333 344
Q ss_pred HHHcCCCcceEEEecCc
Q psy1119 631 MKRTKGRGVDLVLNSLA 647 (1392)
Q Consensus 631 ~~~T~g~GvDvVlds~~ 647 (1392)
.+..+ ++|+++|+.+
T Consensus 87 ~~~~~--~iDilin~Ag 101 (191)
T d1luaa1 87 AEAVK--GAHFVFTAGA 101 (191)
T ss_dssp HHHTT--TCSEEEECCC
T ss_pred HHHhc--CcCeeeecCc
Confidence 44443 6999999875
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.94 E-value=0.0015 Score=68.86 Aligned_cols=167 Identities=14% Similarity=0.108 Sum_probs=91.5
Q ss_pred ceeEeecCCCccccccHHHHhhcCCc-eEEEecC-----------------------CCCCCCC---HHHHHHHHH---H
Q psy1119 1158 NTIFMVPGIEGIATVLEPLAKNINAQ-VLVFQFD-----------------------HTNPPDT---IPEMADSLL---P 1207 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~~y~~La~~L~~~-~~v~~l~-----------------------~e~~~~s---ieelA~~y~---~ 1207 (1392)
+.++++|+.|++...|..+...+..+ +.++..+ ....... +++.++.+. +
T Consensus 22 ~~VI~lHG~G~~~~~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~l~~li~ 101 (229)
T d1fj2a_ 22 AAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKALID 101 (229)
T ss_dssp EEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCHHHHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHHHHHHHhh
Confidence 56889999999999999988887543 3332211 0011111 334333322 2
Q ss_pred HHhhhccCCCCcEEEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCCccccCCCCChHHHHHHHHhcCCccccCC
Q psy1119 1208 HFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYVLTSLRKLPDWNAKLNYFLDLMPEDATHS 1286 (1392)
Q Consensus 1208 ~I~~~q~qp~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~ 1286 (1392)
...+. --+.....|+|||+||.+|+++|.+-. ... .++.+.+..+... .. +..
T Consensus 102 ~~~~~-~i~~~ri~l~GfS~Gg~~a~~~~~~~~---~~~~gvi~~sg~lp~~~-~~-----------------~~~---- 155 (229)
T d1fj2a_ 102 QEVKN-GIPSNRIILGGFSQGGALSLYTALTTQ---QKLAGVTALSCWLPLRA-SF-----------------PQG---- 155 (229)
T ss_dssp HHHHT-TCCGGGEEEEEETHHHHHHHHHHTTCS---SCCSEEEEESCCCTTGG-GS-----------------CSS----
T ss_pred hhhhc-CCCccceeeeecccchHHHHHHHHhhc---cccCccccccccccccc-cc-----------------ccc----
Confidence 22211 124457999999999999998775422 233 5666655432110 00 000
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCCcccceEEEEeeCCCC-CCChhh---cC-ccccc-CCCeEEEEEcc-Ccccccc
Q psy1119 1287 RTYQRNLAHAAYKRITSILKYTDPKHKAFGGNITLLRPTEQA-LPTAED---YG-LSKVC-KKPVKVHFVDG-NHFTVLD 1359 (1392)
Q Consensus 1287 ~~~l~~~~~~~~~~~~~~~~y~~~~~~~~~~pi~l~~a~~~~-~~~~~~---~~-W~~~~-~g~v~v~~v~G-~H~~ml~ 1359 (1392)
+......+.|+.++.+++|. +..+.. +. +++.. ...++.+.++| +|. + .
T Consensus 156 ----------------------~~~~~~~~~Pvli~hG~~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~~g~gH~-i-~ 211 (229)
T d1fj2a_ 156 ----------------------PIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHS-S-C 211 (229)
T ss_dssp ----------------------CCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSS-C-C
T ss_pred ----------------------ccccccccCceeEEEcCCCCeeCHHHHHHHHHHHHhcCCCCceEEEEeCCCCCc-c-C
Confidence 00001234689999999987 432222 22 22322 23588999998 884 3 3
Q ss_pred ChHHHHHHHhhhccc
Q psy1119 1360 NIKSAQIIMHEDSTD 1374 (1392)
Q Consensus 1360 ~~~~~~i~~~l~~~L 1374 (1392)
.+....+..-|++.|
T Consensus 212 ~~~~~~~~~wL~~~L 226 (229)
T d1fj2a_ 212 QQEMMDVKQFIDKLL 226 (229)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhHC
Confidence 344555555566555
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.75 E-value=0.0016 Score=69.47 Aligned_cols=80 Identities=19% Similarity=0.213 Sum_probs=58.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEe
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLN 644 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVld 644 (1392)
+|.++||.||++|+|.+.++.....|++|+.+.+++++.+.+.+.+++... ...|-.+.+-.+.+.+.. .++|+++|
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~-~~~Dv~~~~~v~~~~~~~--g~iDilVn 80 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEP-VCVDLGDWDATEKALGGI--GPVDLLVN 80 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEE-EECCTTCHHHHHHHHTTC--CCCSEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeE-EEEeCCCHHHHHHHHHHc--CCCeEEEE
Confidence 589999999999999999999999999999999999988888777644322 223444444333333333 25888888
Q ss_pred cCc
Q psy1119 645 SLA 647 (1392)
Q Consensus 645 s~~ 647 (1392)
+.+
T Consensus 81 nAg 83 (242)
T d1cyda_ 81 NAA 83 (242)
T ss_dssp CCC
T ss_pred CCc
Confidence 764
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.73 E-value=0.002 Score=68.90 Aligned_cols=80 Identities=18% Similarity=0.257 Sum_probs=58.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEe
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLN 644 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVld 644 (1392)
+|.++||.||++|+|.+.++.....|++|+.+.+++++.+.+.+.+++... ...|-.+.+-.+.+.+.. .++|+++|
T Consensus 6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~-~~~Dv~d~~~v~~~~~~~--g~iDilVn 82 (244)
T d1pr9a_ 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEP-VCVDLGDWEATERALGSV--GPVDLLVN 82 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEE-EECCTTCHHHHHHHHTTC--CCCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeE-EEEeCCCHHHHHHHHHHh--CCceEEEe
Confidence 799999999999999999999999999999999999998888876643221 233444444333433333 25788887
Q ss_pred cCc
Q psy1119 645 SLA 647 (1392)
Q Consensus 645 s~~ 647 (1392)
+.+
T Consensus 83 nAg 85 (244)
T d1pr9a_ 83 NAA 85 (244)
T ss_dssp CCC
T ss_pred ccc
Confidence 654
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=96.61 E-value=0.0086 Score=62.42 Aligned_cols=84 Identities=19% Similarity=0.239 Sum_probs=51.2
Q ss_pred CCCceeEeecCCCccccccHHHHhhcCC-ceEEEecC----CCC----C----CCCHHH-------HHHHHHHHHhhhcc
Q psy1119 1155 GNNNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD----HTN----P----PDTIPE-------MADSLLPHFKKRLV 1214 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~----~e~----~----~~siee-------lA~~y~~~I~~~q~ 1214 (1392)
+.++.|+++|+.+|+...|..+++.|.. .+.|+..+ ++. . ....+. ..+.+...++....
T Consensus 22 ~~~~~vl~lHG~~~~~~~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (238)
T d1ufoa_ 22 APKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAER 101 (238)
T ss_dssp SCCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCCCCCcccccccccchhhhhhhhhHHhHHHHHHHHhhhccc
Confidence 3456789999999999999999999975 47777765 111 0 111111 11111111110000
Q ss_pred CCCCcEEEEeechhHHHHHHHHHH
Q psy1119 1215 HGTDEIKLVGFSFGGMVALELAIK 1238 (1392)
Q Consensus 1215 qp~gPy~L~G~S~Gg~VA~EmA~~ 1238 (1392)
....+..++|||+||.+|..++.+
T Consensus 102 ~~~~~v~~~G~S~Gg~~a~~~~~~ 125 (238)
T d1ufoa_ 102 RFGLPLFLAGGSLGAFVAHLLLAE 125 (238)
T ss_dssp HHCCCEEEEEETHHHHHHHHHHHT
T ss_pred cCCceEEEEEecccHHHHHHHHhc
Confidence 023478999999999999877643
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.54 E-value=0.0024 Score=68.13 Aligned_cols=81 Identities=11% Similarity=0.121 Sum_probs=57.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCcc----HHHHHHHHcCCCcce
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTS----FEQLVMKRTKGRGVD 640 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~----~~~~i~~~T~g~GvD 640 (1392)
+|.++||.||++|+|.+..+.....|++|+.+.+++++.+.+.+.++.-......|-.+.+ +.+.+.+..+ ++|
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~id 82 (244)
T d1nffa_ 5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFG--GLH 82 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhC--CCe
Confidence 6899999999999999999999999999999999999988887764211111112333432 2233333332 589
Q ss_pred EEEecCc
Q psy1119 641 LVLNSLA 647 (1392)
Q Consensus 641 vVlds~~ 647 (1392)
+++|+.+
T Consensus 83 ilinnAG 89 (244)
T d1nffa_ 83 VLVNNAG 89 (244)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 9888765
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=96.54 E-value=0.003 Score=68.01 Aligned_cols=82 Identities=16% Similarity=0.179 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCce---eeCCCccHH----HHHHHHcCCC
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENI---GNSRDTSFE----QLVMKRTKGR 637 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i---~~s~~~~~~----~~i~~~T~g~ 637 (1392)
+|.++||.||++|+|.+.++-....|++|+.+.+++++.+.+.+.+...+..+. .|-.+.+.. +.+.+..+ .
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~-g 83 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD-G 83 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT-S
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC-C
Confidence 799999999999999999999999999999999998877665554322233222 233343322 23333332 2
Q ss_pred cceEEEecCc
Q psy1119 638 GVDLVLNSLA 647 (1392)
Q Consensus 638 GvDvVlds~~ 647 (1392)
.+|+++|+.+
T Consensus 84 ~idilinnag 93 (258)
T d1ae1a_ 84 KLNILVNNAG 93 (258)
T ss_dssp CCCEEEECCC
T ss_pred CcEEEecccc
Confidence 4778877653
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.48 E-value=0.0036 Score=67.97 Aligned_cols=102 Identities=16% Similarity=0.273 Sum_probs=65.9
Q ss_pred CCEE-EEEcCCchHHHHHHH-HHHHcCCEEEEEecChhhHHHHHHHCCCCCcC-c--eeeCCCcc----HHHHHHHHcCC
Q psy1119 566 GESI-LIHAGSGGVGQAAIN-LARYMDAEIFTTVGTPEKREFIRKTFPFIKEE-N--IGNSRDTS----FEQLVMKRTKG 636 (1392)
Q Consensus 566 GetV-LI~ga~GgVG~aaIq-lA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~-~--i~~s~~~~----~~~~i~~~T~g 636 (1392)
|.+| ||+||++|+|.++.+ +|+..|++|+.++++.++.+.+.+.+...+.. . ..|-.+.+ +.+.+.+..+
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g- 80 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG- 80 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC-
Confidence 5666 899999999998875 67777999999999998876655432111111 1 23444432 3445554443
Q ss_pred CcceEEEecCch-----------h---------------HHHHHHhcccCCeEEEEEcc
Q psy1119 637 RGVDLVLNSLAE-----------E---------------KLQASVRCLAQGGRFLEIGK 669 (1392)
Q Consensus 637 ~GvDvVlds~~~-----------~---------------~l~~s~~~La~~Gr~v~iG~ 669 (1392)
++|+++|..|- + ..+..+..+++.||+|.++.
T Consensus 81 -~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS 138 (275)
T d1wmaa1 81 -GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 138 (275)
T ss_dssp -SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred -CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 69999997651 0 12334556677888888764
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=96.45 E-value=0.0023 Score=68.28 Aligned_cols=81 Identities=17% Similarity=0.204 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCcc----HHHHHHHHcCCCcce
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTS----FEQLVMKRTKGRGVD 640 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~----~~~~i~~~T~g~GvD 640 (1392)
+|.++||.||++|+|.+.++.....|++|+.+.+++++.+.+.+.++.-......|-.+.+ +.+.+.+.. .++|
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g~iD 80 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEF--GEVD 80 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHT--CSCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhccc--CCcc
Confidence 5899999999999999999999999999999999998888777754211111223333332 222333332 2578
Q ss_pred EEEecCc
Q psy1119 641 LVLNSLA 647 (1392)
Q Consensus 641 vVlds~~ 647 (1392)
+++|+.+
T Consensus 81 ilVnnAg 87 (243)
T d1q7ba_ 81 ILVNNAG 87 (243)
T ss_dssp EEEECCC
T ss_pred eehhhhh
Confidence 8887654
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=96.36 E-value=0.005 Score=65.50 Aligned_cols=78 Identities=14% Similarity=0.134 Sum_probs=57.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCce-eeCCCcc----HHHHHHHHcCCCcc
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENI-GNSRDTS----FEQLVMKRTKGRGV 639 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i-~~s~~~~----~~~~i~~~T~g~Gv 639 (1392)
+|.++||.||++|+|.+.++.....|++|+.+.+++++.+.+.+. ++...+ .|-.+.+ +.+.+.+..+ ++
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~i 78 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA---VGAHPVVMDVADPASVERGFAEALAHLG--RL 78 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---TTCEEEECCTTCHHHHHHHHHHHHHHHS--SC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH---cCCeEEEEecCCHHHHHHHHHHHHHhcC--Cc
Confidence 589999999999999999999999999999999999888888774 333322 3444433 2233333332 58
Q ss_pred eEEEecCc
Q psy1119 640 DLVLNSLA 647 (1392)
Q Consensus 640 DvVlds~~ 647 (1392)
|+++|+.+
T Consensus 79 DilVnnAG 86 (242)
T d1ulsa_ 79 DGVVHYAG 86 (242)
T ss_dssp CEEEECCC
T ss_pred eEEEECCc
Confidence 99888765
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=96.29 E-value=0.0037 Score=67.03 Aligned_cols=78 Identities=15% Similarity=0.169 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCce---eeCCCcc----HHHHHHHHcCCC
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENI---GNSRDTS----FEQLVMKRTKGR 637 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i---~~s~~~~----~~~~i~~~T~g~ 637 (1392)
+|.++||.||++|+|.+.++.....|++|+.+.+++++.+.+.+.+ +.... .|-.+.+ +.+.+.+..+
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-- 78 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG-- 78 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHcC--
Confidence 6899999999999999999988899999999999998888777743 33322 2333332 2222333322
Q ss_pred cceEEEecCc
Q psy1119 638 GVDLVLNSLA 647 (1392)
Q Consensus 638 GvDvVlds~~ 647 (1392)
++|+++|+.+
T Consensus 79 ~iDilVnnAg 88 (254)
T d1hdca_ 79 SVDGLVNNAG 88 (254)
T ss_dssp CCCEEEECCC
T ss_pred CccEEEecCc
Confidence 5888888664
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=96.23 E-value=0.0061 Score=65.53 Aligned_cols=46 Identities=17% Similarity=0.114 Sum_probs=40.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHC
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTF 610 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~ 610 (1392)
+|.++||.||++|+|.+........|++|+.+.+++++.+.+.+.+
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~ 49 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASV 49 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 5899999999999999999998999999999999988877766543
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=96.22 E-value=0.0039 Score=66.97 Aligned_cols=78 Identities=17% Similarity=0.175 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCce---eeCCCcc----HHHHHHHHcCCC
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENI---GNSRDTS----FEQLVMKRTKGR 637 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i---~~s~~~~----~~~~i~~~T~g~ 637 (1392)
+|.++||.||++|+|.+..+.....|++|+.+.++.++.+.+.+.+ +.... .|-.+.+ +.+.+.+.. .
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~--g 78 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW--G 78 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH--S
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh--C
Confidence 5899999999999999999999999999999999988887777754 22222 2333332 222232222 2
Q ss_pred cceEEEecCc
Q psy1119 638 GVDLVLNSLA 647 (1392)
Q Consensus 638 GvDvVlds~~ 647 (1392)
++|+++|+.+
T Consensus 79 ~iDilVnnAg 88 (256)
T d1k2wa_ 79 SIDILVNNAA 88 (256)
T ss_dssp CCCEEEECCC
T ss_pred CccEEEeecc
Confidence 6888888765
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=96.20 E-value=0.0071 Score=60.54 Aligned_cols=82 Identities=18% Similarity=0.219 Sum_probs=58.9
Q ss_pred HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHc
Q psy1119 555 YAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRT 634 (1392)
Q Consensus 555 ~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T 634 (1392)
.+|...+-..+|.+|||.|+ ||.+.+++..+...|++|+.+.++.+|.+.+.+.|........... .+ .
T Consensus 7 ~~l~~~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~--~~--------~ 75 (170)
T d1nyta1 7 SDLERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM--DE--------L 75 (170)
T ss_dssp HHHHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS--GG--------G
T ss_pred HHHHHcCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccc--cc--------c
Confidence 45555554568999999955 9999999998889999999999999999988887643322111111 11 1
Q ss_pred CCCcceEEEecCc
Q psy1119 635 KGRGVDLVLNSLA 647 (1392)
Q Consensus 635 ~g~GvDvVlds~~ 647 (1392)
....+|+|+||.+
T Consensus 76 ~~~~~dliIN~Tp 88 (170)
T d1nyta1 76 EGHEFDLIINATS 88 (170)
T ss_dssp TTCCCSEEEECCS
T ss_pred cccccceeecccc
Confidence 2346899999875
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.19 E-value=0.0073 Score=59.52 Aligned_cols=96 Identities=19% Similarity=0.249 Sum_probs=72.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEe
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLN 644 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVld 644 (1392)
+.-+|+|.|| |-+|+.|++.|+.+||.|.+.+.+.++++.+...|+. ......+....+.+.+. ..|+|+.
T Consensus 31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~--~~~~~~~~~~~l~~~~~------~aDivI~ 101 (168)
T d1pjca1 31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS--RVELLYSNSAEIETAVA------EADLLIG 101 (168)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG--GSEEEECCHHHHHHHHH------TCSEEEE
T ss_pred CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc--cceeehhhhhhHHHhhc------cCcEEEE
Confidence 3468999955 9999999999999999999999999999999887642 22233333334444442 5799999
Q ss_pred cCc--hh-----HHHHHHhcccCCeEEEEEcc
Q psy1119 645 SLA--EE-----KLQASVRCLAQGGRFLEIGK 669 (1392)
Q Consensus 645 s~~--~~-----~l~~s~~~La~~Gr~v~iG~ 669 (1392)
+.- +. .-+..++.+++|.-+|++.-
T Consensus 102 aalipG~~aP~lIt~~mv~~Mk~GSVIVDvai 133 (168)
T d1pjca1 102 AVLVPGRRAPILVPASLVEQMRTGSVIVDVAV 133 (168)
T ss_dssp CCCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred eeecCCcccCeeecHHHHhhcCCCcEEEEeec
Confidence 762 22 24688899999999999864
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=96.19 E-value=0.0035 Score=67.46 Aligned_cols=45 Identities=18% Similarity=0.296 Sum_probs=40.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKT 609 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~ 609 (1392)
+|.++||.||++|+|.+.++.....|++|+.+.+++++.+.+.+.
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~ 51 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQ 51 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 699999999999999999998889999999999998887766554
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=96.17 E-value=0.0025 Score=69.36 Aligned_cols=78 Identities=19% Similarity=0.316 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCc---eeeCCCcc----HHHHHHHHcCCC
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEEN---IGNSRDTS----FEQLVMKRTKGR 637 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~---i~~s~~~~----~~~~i~~~T~g~ 637 (1392)
+|.++||.||++|+|.+.++.....|++|+.+.+++++.+.+.+.+ +... ..|-.+.+ +.+.+.+..+
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g-- 78 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARFG-- 78 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHhC--
Confidence 5999999999999999999999999999999999998887776654 2222 22333332 2222233322
Q ss_pred cceEEEecCc
Q psy1119 638 GVDLVLNSLA 647 (1392)
Q Consensus 638 GvDvVlds~~ 647 (1392)
++|+++|+.+
T Consensus 79 ~idilvnnAG 88 (276)
T d1bdba_ 79 KIDTLIPNAG 88 (276)
T ss_dssp CCCEEECCCC
T ss_pred Cccccccccc
Confidence 5788887665
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.16 E-value=0.0043 Score=66.61 Aligned_cols=81 Identities=10% Similarity=0.220 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCce---eeCCCcc----HHHHHHHHcCCC
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENI---GNSRDTS----FEQLVMKRTKGR 637 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i---~~s~~~~----~~~~i~~~T~g~ 637 (1392)
+|.++||.||++|+|.+..+.....|++|+.+.+++++.+.+.+.+...+...+ .|-.+.+ +.+.+.+..+
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g-- 87 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG-- 87 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence 699999999999999999999999999999999998887666554322232222 2333322 2222333332
Q ss_pred cceEEEecCc
Q psy1119 638 GVDLVLNSLA 647 (1392)
Q Consensus 638 GvDvVlds~~ 647 (1392)
++|+++|+.+
T Consensus 88 ~iDilvnnAG 97 (255)
T d1fmca_ 88 KVDILVNNAG 97 (255)
T ss_dssp SCCEEEECCC
T ss_pred CCCEeeeCCc
Confidence 5888888764
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=96.14 E-value=0.0027 Score=68.13 Aligned_cols=78 Identities=15% Similarity=0.234 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCcee---eCCCcc----HHHHHHHHcCCC
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIG---NSRDTS----FEQLVMKRTKGR 637 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~---~s~~~~----~~~~i~~~T~g~ 637 (1392)
+|.++||.||++|+|.+..+.....|++|+.+.+++++.+.+.+.+ +...++ |-.+.+ +.+.+.+.. .
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~--g 79 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL--G 79 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH--C
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh--C
Confidence 6899999999999999999999999999999999998888877754 333322 333332 222232222 2
Q ss_pred cceEEEecCc
Q psy1119 638 GVDLVLNSLA 647 (1392)
Q Consensus 638 GvDvVlds~~ 647 (1392)
++|+++|+.+
T Consensus 80 ~iDilVnnAG 89 (253)
T d1hxha_ 80 TLNVLVNNAG 89 (253)
T ss_dssp SCCEEEECCC
T ss_pred CCCeEEeccc
Confidence 5788888764
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=96.14 E-value=0.0087 Score=64.60 Aligned_cols=81 Identities=10% Similarity=0.209 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCcee--eCCCcc----HHHHHHHHcCCCc
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIG--NSRDTS----FEQLVMKRTKGRG 638 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~--~s~~~~----~~~~i~~~T~g~G 638 (1392)
+|.++||.||++|+|.+.++.....|++|+.+.+++++.+.+.+.+..-+....+ |-.+.+ +.+.+.+.. ..
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g~ 82 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH--GK 82 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH--SC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHc--CC
Confidence 6899999999999999999998999999999999998888777654322222222 333322 222222322 25
Q ss_pred ceEEEecCc
Q psy1119 639 VDLVLNSLA 647 (1392)
Q Consensus 639 vDvVlds~~ 647 (1392)
+|+++|+.+
T Consensus 83 iD~lVnnAG 91 (268)
T d2bgka1 83 LDIMFGNVG 91 (268)
T ss_dssp CCEEEECCC
T ss_pred cceeccccc
Confidence 788887664
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.12 E-value=0.0071 Score=64.57 Aligned_cols=80 Identities=13% Similarity=0.176 Sum_probs=57.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccH----HHHHHHHcCCCcce
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSF----EQLVMKRTKGRGVD 640 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~----~~~i~~~T~g~GvD 640 (1392)
+|.++||.||++|+|.+..+.....|++|+.+.+++++.+.+.+.++.. .-...|-.+.+- .+.+.+..+ ++|
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~-~~~~~Dvs~~~~v~~~~~~~~~~~g--~iD 81 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGA-VFILCDVTQEDDVKTLVSETIRRFG--RLD 81 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTE-EEEECCTTSHHHHHHHHHHHHHHHS--CCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCC-eEEEccCCCHHHHHHHHHHHHHhcC--CCC
Confidence 5999999999999999999999999999999999999988888865321 111234334332 222333222 588
Q ss_pred EEEecCc
Q psy1119 641 LVLNSLA 647 (1392)
Q Consensus 641 vVlds~~ 647 (1392)
+++|+.+
T Consensus 82 ilVnnAG 88 (250)
T d1ydea1 82 CVVNNAG 88 (250)
T ss_dssp EEEECCC
T ss_pred EEEeccc
Confidence 8888765
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.10 E-value=0.0072 Score=64.31 Aligned_cols=45 Identities=16% Similarity=0.135 Sum_probs=40.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKT 609 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~ 609 (1392)
.|.++||.||++|+|.+...-....|++|+.+++++++.+.+.+.
T Consensus 6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~ 50 (244)
T d1yb1a_ 6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAK 50 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 699999999999999999988889999999999999888776654
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=96.08 E-value=0.0081 Score=64.19 Aligned_cols=81 Identities=19% Similarity=0.160 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCce--eeCCCcc----HHHHHHHHcCCCc
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENI--GNSRDTS----FEQLVMKRTKGRG 638 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i--~~s~~~~----~~~~i~~~T~g~G 638 (1392)
+|.++||.||++|+|.+.++.....|++|+.+.+++++.+.+.+....-+.-.. .|-.+.+ +.+.+.+..+ +
T Consensus 5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G--~ 82 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG--P 82 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS--S
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhC--C
Confidence 589999999999999999999999999999999999888877765432111111 2333332 2333333332 6
Q ss_pred ceEEEecCc
Q psy1119 639 VDLVLNSLA 647 (1392)
Q Consensus 639 vDvVlds~~ 647 (1392)
+|+++|+.+
T Consensus 83 iDiLVnnAg 91 (251)
T d1zk4a1 83 VSTLVNNAG 91 (251)
T ss_dssp CCEEEECCC
T ss_pred ceEEEeccc
Confidence 888888654
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.05 E-value=0.0038 Score=66.64 Aligned_cols=78 Identities=18% Similarity=0.184 Sum_probs=58.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcC-ceeeCCCccHHHHHHHHcCCCcceEEE
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEE-NIGNSRDTSFEQLVMKRTKGRGVDLVL 643 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~-~i~~s~~~~~~~~i~~~T~g~GvDvVl 643 (1392)
+|.++||.||++|+|.+..+-....|++|+.+.+++++.+.+.+.. +.. .+.|....+..+.+.+..+ ++|+++
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~--~id~lV 79 (245)
T d2ag5a1 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP---GIQTRVLDVTKKKQIDQFANEVE--RLDVLF 79 (245)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGST---TEEEEECCTTCHHHHHHHHHHCS--CCSEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcc---CCceeeeeccccccccccccccc--cceeEE
Confidence 6899999999999999999999999999999999988877776532 222 2334444555555555543 688888
Q ss_pred ecCc
Q psy1119 644 NSLA 647 (1392)
Q Consensus 644 ds~~ 647 (1392)
|+.+
T Consensus 80 n~ag 83 (245)
T d2ag5a1 80 NVAG 83 (245)
T ss_dssp ECCC
T ss_pred eccc
Confidence 8765
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=96.00 E-value=0.012 Score=62.47 Aligned_cols=78 Identities=17% Similarity=0.206 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCcee---eCCCcc-H---HHHHHHHcCCC
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIG---NSRDTS-F---EQLVMKRTKGR 637 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~---~s~~~~-~---~~~i~~~T~g~ 637 (1392)
+|.++||.||++|+|.+.++-....|++|+.+.++.++.+.+.+. ++....+ |-++.+ . .+.+.+..+
T Consensus 4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g-- 78 (241)
T d2a4ka1 4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVADVSDPKAVEAVFAEALEEFG-- 78 (241)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---CCSSEEEEECCTTSHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH---cCCceEEEEecCCCHHHHHHHHHHHHHHhC--
Confidence 689999999999999999999999999999999999888877774 4433322 333322 2 223333332
Q ss_pred cceEEEecCc
Q psy1119 638 GVDLVLNSLA 647 (1392)
Q Consensus 638 GvDvVlds~~ 647 (1392)
++|+.+|+.+
T Consensus 79 ~iDiLinnAg 88 (241)
T d2a4ka1 79 RLHGVAHFAG 88 (241)
T ss_dssp CCCEEEEGGG
T ss_pred CccEeccccc
Confidence 5888888654
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.95 E-value=0.0045 Score=66.59 Aligned_cols=45 Identities=20% Similarity=0.258 Sum_probs=40.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKT 609 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~ 609 (1392)
+|.++||.||++|+|.+.++.....|++|+.+.+++++.+.+.+.
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~ 51 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSK 51 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 699999999999999999999999999999999998887766553
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.93 E-value=0.0018 Score=68.82 Aligned_cols=97 Identities=18% Similarity=0.189 Sum_probs=61.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCC--c----cHHHHHHHHcCCCc
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRD--T----SFEQLVMKRTKGRG 638 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~--~----~~~~~i~~~T~g~G 638 (1392)
+|.+|||.||++|+|.+.++.....|++|+.+..++.+.. .......... . .+...+.+..+..+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------SASVIVKMTDSFTEQADQVTAEVGKLLGDQK 71 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------cccceeecccCcHHHHHHHHHHHHHHhCCCC
Confidence 4889999999999999999999999999998876543211 1111111111 1 12333444445557
Q ss_pred ceEEEecCch------------h---------------HHHHHHhcccCCeEEEEEccc
Q psy1119 639 VDLVLNSLAE------------E---------------KLQASVRCLAQGGRFLEIGKF 670 (1392)
Q Consensus 639 vDvVlds~~~------------~---------------~l~~s~~~La~~Gr~v~iG~~ 670 (1392)
+|+++|+.+. + ..+..+..++++|++|.++..
T Consensus 72 iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~ 130 (236)
T d1dhra_ 72 VDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAK 130 (236)
T ss_dssp EEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred ceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccH
Confidence 9999987541 1 112234456788999998754
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=95.91 E-value=0.0094 Score=63.86 Aligned_cols=44 Identities=16% Similarity=0.169 Sum_probs=38.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q psy1119 566 GESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKT 609 (1392)
Q Consensus 566 GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~ 609 (1392)
|..+||.||++|+|.+........|++|+.+.+++++.+.+.+.
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~ 45 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKE 45 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 66789999999999999998899999999999998877766553
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.88 E-value=0.0083 Score=64.35 Aligned_cols=44 Identities=18% Similarity=0.218 Sum_probs=39.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRK 608 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~ 608 (1392)
+|.+|||.||++|||.+.+......|++|+.+.+++++.+.+.+
T Consensus 9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~ 52 (257)
T d1xg5a_ 9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAA 52 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 58999999999999999999888999999999999888766554
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.86 E-value=0.0048 Score=65.92 Aligned_cols=80 Identities=15% Similarity=0.167 Sum_probs=55.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHCCCCCcCce--eeCCCcc----HHHHHHHHcCCC
Q psy1119 566 GESILIHAGSGGVGQAAINLARYMDA--EIFTTVGTPEKREFIRKTFPFIKEENI--GNSRDTS----FEQLVMKRTKGR 637 (1392)
Q Consensus 566 GetVLI~ga~GgVG~aaIqlA~~~Ga--~V~~tv~s~ek~~~l~~~~p~l~~~~i--~~s~~~~----~~~~i~~~T~g~ 637 (1392)
..+|||.||++|+|.+.++.....|+ .|+.++++.++.+.+++..+. .-++ .|-.+.+ +.+.+.+..+..
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~--~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~ 80 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDS--RVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCT--TEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCC--ceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence 37899999999999999987777886 688899998888888763321 1122 2333332 344444444445
Q ss_pred cceEEEecCc
Q psy1119 638 GVDLVLNSLA 647 (1392)
Q Consensus 638 GvDvVlds~~ 647 (1392)
++|+++|+.|
T Consensus 81 ~idilinnAG 90 (250)
T d1yo6a1 81 GLSLLINNAG 90 (250)
T ss_dssp CCCEEEECCC
T ss_pred CeEEEEEcCc
Confidence 6899998875
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.85 E-value=0.0096 Score=63.57 Aligned_cols=46 Identities=9% Similarity=0.191 Sum_probs=40.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHC
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTF 610 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~ 610 (1392)
.+..+||.||++|+|.+.+......|++|+.+.+++++.+.+.+.+
T Consensus 9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l 54 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEI 54 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHH
Confidence 4789999999999999999988899999999999988877666543
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.75 E-value=0.0022 Score=65.21 Aligned_cols=33 Identities=33% Similarity=0.430 Sum_probs=29.4
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCc
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGV 817 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~ 817 (1392)
..|+||+|++|+++|++|++.|++ |++.+|+..
T Consensus 3 i~vigGaG~iG~alA~~la~~G~~-V~l~~R~~e 35 (212)
T d1jaya_ 3 VALLGGTGNLGKGLALRLATLGHE-IVVGSRREE 35 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCE-EEEEESSHH
T ss_pred EEEEeCCcHHHHHHHHHHHHCCCE-EEEEECCHH
Confidence 568899999999999999999998 888899853
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.69 E-value=0.0065 Score=65.77 Aligned_cols=45 Identities=22% Similarity=0.310 Sum_probs=40.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKT 609 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~ 609 (1392)
+|.++||.||++|+|.+.++.....|++|+.+.+++++.+.+.+.
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~ 48 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQI 48 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 589999999999999999999999999999999999887776654
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=95.65 E-value=0.012 Score=62.70 Aligned_cols=78 Identities=21% Similarity=0.222 Sum_probs=54.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCc-eeeCCCcc----HHHHHHHHcCCCc
Q psy1119 564 QKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEEN-IGNSRDTS----FEQLVMKRTKGRG 638 (1392)
Q Consensus 564 ~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~-i~~s~~~~----~~~~i~~~T~g~G 638 (1392)
-+|.++||.||++|+|.+..+.....|++|+.+.+++++.+...+. +... ..|-.+.+ +.+.+.+..+ +
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~~~G--~ 76 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAI----GGAFFQVDLEDERERVRFVEEAAYALG--R 76 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHH----TCEEEECCTTCHHHHHHHHHHHHHHHS--C
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc----CCeEEEEeCCCHHHHHHHHHHHHHhcC--C
Confidence 3699999999999999999999999999999999988777665542 2221 23434432 2233333332 5
Q ss_pred ceEEEecCc
Q psy1119 639 VDLVLNSLA 647 (1392)
Q Consensus 639 vDvVlds~~ 647 (1392)
+|+++|+.+
T Consensus 77 iDiLVnnAG 85 (248)
T d2d1ya1 77 VDVLVNNAA 85 (248)
T ss_dssp CCEEEECCC
T ss_pred CCeEEEeCc
Confidence 888888764
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=95.64 E-value=0.019 Score=61.84 Aligned_cols=103 Identities=16% Similarity=0.209 Sum_probs=65.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHCCCCCcCce---eeCCCcc----HHHHHHHHcCC
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT-PEKREFIRKTFPFIKEENI---GNSRDTS----FEQLVMKRTKG 636 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s-~ek~~~l~~~~p~l~~~~i---~~s~~~~----~~~~i~~~T~g 636 (1392)
+|.++||.||++|+|.+..+.....|++|+.+.++ +++.+.+.+.+...+.+.. .|-.+.+ +.+.+.+..+
T Consensus 17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g- 95 (272)
T d1g0oa_ 17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG- 95 (272)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC-
Confidence 58999999999999999999999999999988765 4443433322211222222 2333422 2333333333
Q ss_pred CcceEEEecCch-----------h---------------HHHHHHhcccCCeEEEEEcc
Q psy1119 637 RGVDLVLNSLAE-----------E---------------KLQASVRCLAQGGRFLEIGK 669 (1392)
Q Consensus 637 ~GvDvVlds~~~-----------~---------------~l~~s~~~La~~Gr~v~iG~ 669 (1392)
++|+++++.+. + ..+..+..+.+.|+.+.++.
T Consensus 96 -~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s 153 (272)
T d1g0oa_ 96 -KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS 153 (272)
T ss_dssp -CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred -CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccc
Confidence 68999986541 0 23445566777888888764
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.51 E-value=0.021 Score=60.98 Aligned_cols=81 Identities=14% Similarity=0.153 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCC-CCcCce----eeCCCcc----HHHHHHHHcC
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPF-IKEENI----GNSRDTS----FEQLVMKRTK 635 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~-l~~~~i----~~s~~~~----~~~~i~~~T~ 635 (1392)
.|.++||.||++|+|.+..+.....|++|+.+.++.++.+.+.+.... .+...+ .|-.+.+ +.+.+.+..+
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 489999999999999999999999999999999998887666543211 111111 2333432 2222323322
Q ss_pred CCcceEEEecCc
Q psy1119 636 GRGVDLVLNSLA 647 (1392)
Q Consensus 636 g~GvDvVlds~~ 647 (1392)
++|+++|+.+
T Consensus 82 --~iDilVnnAg 91 (254)
T d2gdza1 82 --RLDILVNNAG 91 (254)
T ss_dssp --CCCEEEECCC
T ss_pred --CcCeeccccc
Confidence 6899888764
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.49 E-value=0.007 Score=65.61 Aligned_cols=45 Identities=22% Similarity=0.346 Sum_probs=40.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKT 609 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~ 609 (1392)
+|.++||.||++|+|.+.++.....|++|+.+.+++++.+.+.+.
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~ 47 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQ 47 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 589999999999999999999999999999999998887666543
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.49 E-value=0.017 Score=57.75 Aligned_cols=81 Identities=15% Similarity=0.153 Sum_probs=54.9
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
+.++.+++|+||+|++|+..++.....|++ ++.+.++. + ..+.+++.|+.-.+ |.++.+-.+++.+..
T Consensus 26 ~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~-vi~~~~~~----~---~~~~~~~~Ga~~vi---~~~~~~~~~~i~~~t- 93 (174)
T d1yb5a2 26 VKAGESVLVHGASGGVGLAACQIARAYGLK-ILGTAGTE----E---GQKIVLQNGAHEVF---NHREVNYIDKIKKYV- 93 (174)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESSH----H---HHHHHHHTTCSEEE---ETTSTTHHHHHHHHH-
T ss_pred CCCCCEEEEEeccccccccccccccccCcc-cccccccc----c---ccccccccCccccc---ccccccHHHHhhhhh-
Confidence 467889999999999999999999899998 55555552 1 12344567875433 555554444443333
Q ss_pred hcCCccEEEECcc
Q psy1119 858 KLGPVDGIFNLAV 870 (1392)
Q Consensus 858 ~~g~I~gvi~~Ag 870 (1392)
.-..+|.+|.+.|
T Consensus 94 ~~~g~d~v~d~~g 106 (174)
T d1yb5a2 94 GEKGIDIIIEMLA 106 (174)
T ss_dssp CTTCEEEEEESCH
T ss_pred ccCCceEEeeccc
Confidence 2236999999876
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=95.47 E-value=0.012 Score=63.04 Aligned_cols=45 Identities=16% Similarity=0.204 Sum_probs=36.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHH
Q psy1119 564 QKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTP-EKREFIRK 608 (1392)
Q Consensus 564 ~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~-ek~~~l~~ 608 (1392)
-.|++|||.||++|+|.+..+.....|++|+.++++. ++.+.+.+
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~ 49 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVA 49 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHH
Confidence 3699999999999999999999999999999877654 33444444
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=95.46 E-value=0.031 Score=56.27 Aligned_cols=85 Identities=14% Similarity=0.171 Sum_probs=62.4
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
.+++++|.|+ ||.|++++..|++.|++++.+..|+....+......+.+... .......+|+.+.+++...+.
T Consensus 17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----- 89 (182)
T d1vi2a1 17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN-TDCVVTVTDLADQQAFAEALA----- 89 (182)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHH-----
T ss_pred CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhh-cCcceEeeecccccchhhhhc-----
Confidence 5688999976 899999999999999999999999876555444444444332 223345678888887765443
Q ss_pred CCccEEEECcccC
Q psy1119 860 GPVDGIFNLAVVL 872 (1392)
Q Consensus 860 g~I~gvi~~Agv~ 872 (1392)
..|.|||+..+.
T Consensus 90 -~~diiIN~Tp~G 101 (182)
T d1vi2a1 90 -SADILTNGTKVG 101 (182)
T ss_dssp -TCSEEEECSSTT
T ss_pred -ccceeccccCCc
Confidence 679999998653
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.45 E-value=0.021 Score=62.71 Aligned_cols=91 Identities=16% Similarity=0.180 Sum_probs=55.1
Q ss_pred CCCceeEeecCCC---ccccccHHHHhhcCC--ceEEEecC-----CCCCCCCHHHHHHHHH---HHHhhhccCCCCcEE
Q psy1119 1155 GNNNTIFMVPGIE---GIATVLEPLAKNINA--QVLVFQFD-----HTNPPDTIPEMADSLL---PHFKKRLVHGTDEIK 1221 (1392)
Q Consensus 1155 g~~~pLF~vp~ag---G~~~~y~~La~~L~~--~~~v~~l~-----~e~~~~sieelA~~y~---~~I~~~q~qp~gPy~ 1221 (1392)
+..|-|+.||++| |+...+..++.++-. .+.|+.++ +.+.+..+++..+.+. +...+..+ ......
T Consensus 77 ~~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~~g~~Vv~v~Yrlap~~~~p~~~~d~~~a~~~~~~~~~~~~~-d~~ri~ 155 (311)
T d1jjia_ 77 PDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDATKWVAENAEELRI-DPSKIF 155 (311)
T ss_dssp SSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTE-EEEEEE
T ss_pred CCceEEEEEcCCCCccCChhhhhhhhhhhhhcCCcEEEEeccccccccccchhhhhhhhhhhHHHHhHHHhCc-ChhHEE
Confidence 3334567889874 666777777766632 45555554 2233344444443332 11111101 113588
Q ss_pred EEeechhHHHHHHHHHHHHHcCCcc
Q psy1119 1222 LVGFSFGGMVALELAIKLEQLGTKC 1246 (1392)
Q Consensus 1222 L~G~S~Gg~VA~EmA~~Le~~G~~v 1246 (1392)
++|+|.||.+|..++..+...+...
T Consensus 156 v~G~SaGG~la~~~~~~~~~~~~~~ 180 (311)
T d1jjia_ 156 VGGDSAGGNLAAAVSIMARDSGEDF 180 (311)
T ss_dssp EEEETHHHHHHHHHHHHHHHTTCCC
T ss_pred EEeeecCCcceeechhhhhhccccc
Confidence 9999999999999999999888655
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=95.45 E-value=0.017 Score=61.91 Aligned_cols=44 Identities=20% Similarity=0.205 Sum_probs=39.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRK 608 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~ 608 (1392)
+|.++||.||++|+|.+..+.....|++|+.+.+++++.+.+.+
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~ 46 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKA 46 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 58899999999999999999999999999999999887765543
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=95.43 E-value=0.011 Score=63.13 Aligned_cols=43 Identities=16% Similarity=0.198 Sum_probs=38.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIR 607 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~ 607 (1392)
+|.++||.||++|+|.+..+.....|++|+.+.++.++.+.+.
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~ 46 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAA 46 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 5899999999999999999999999999999999887765443
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=95.39 E-value=0.023 Score=57.16 Aligned_cols=85 Identities=16% Similarity=0.156 Sum_probs=55.8
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
..++.+++|+|+ |++|+..++++...||++|+.++++. . ..+..++.|+...+-.-+ .+..+..+.+.+..
T Consensus 26 ~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~----~---~~~~a~~lGa~~vi~~~~-~~~~~~~~~i~~~~ 96 (182)
T d1vj0a2 26 SFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSP----N---RLKLAEEIGADLTLNRRE-TSVEERRKAIMDIT 96 (182)
T ss_dssp CCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCH----H---HHHHHHHTTCSEEEETTT-SCHHHHHHHHHHHT
T ss_pred CCCCCEEEEECC-Cccchhheeccccccccccccccccc----c---cccccccccceEEEeccc-cchHHHHHHHHHhh
Confidence 346788999975 99999999999999998899888873 1 223345668755442222 23333333333332
Q ss_pred hcCCccEEEECccc
Q psy1119 858 KLGPVDGIFNLAVV 871 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv 871 (1392)
.-..+|.||.+.|.
T Consensus 97 ~~~g~Dvvid~vG~ 110 (182)
T d1vj0a2 97 HGRGADFILEATGD 110 (182)
T ss_dssp TTSCEEEEEECSSC
T ss_pred CCCCceEEeecCCc
Confidence 22358999999884
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=95.38 E-value=0.035 Score=59.94 Aligned_cols=59 Identities=3% Similarity=-0.095 Sum_probs=37.6
Q ss_pred cccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-CccccccChHHHHHHHhhhccc
Q psy1119 1314 AFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHFTVLDNIKSAQIIMHEDSTD 1374 (1392)
Q Consensus 1314 ~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~~ml~~~~~~~i~~~l~~~L 1374 (1392)
++++|++++.+++|. +.......+.+...++.+++.++| +|...- .....+..-+++.|
T Consensus 256 ~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~~~l~~~~~~gH~~~~--~~~~~~~~fl~~~L 316 (318)
T d1l7aa_ 256 RVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEYIP--AFQTEKLAFFKQIL 316 (318)
T ss_dssp GCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSCCH--HHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEECCCCCcCHHHHHHHHHHcCCCcEEEEECCCCCCCcH--HHHHHHHHHHHHhC
Confidence 688999999999987 554444444344456788999986 786432 22333444455444
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=95.37 E-value=0.021 Score=56.89 Aligned_cols=101 Identities=14% Similarity=0.170 Sum_probs=69.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcC---ceeeCC-------------CccHHHH
Q psy1119 566 GESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEE---NIGNSR-------------DTSFEQL 629 (1392)
Q Consensus 566 GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~---~i~~s~-------------~~~~~~~ 629 (1392)
.-+|+|.|| |-+|+.|++.|+.+||.|.+.+.+.++++.+++.++.+-.. ...+.. .....+.
T Consensus 29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~ 107 (183)
T d1l7da1 29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEA 107 (183)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHH
T ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHHH
Confidence 358999965 99999999999999999999999999999998855321100 000000 0112334
Q ss_pred HHHHcCCCcceEEEecC--chh-----HHHHHHhcccCCeEEEEEcc
Q psy1119 630 VMKRTKGRGVDLVLNSL--AEE-----KLQASVRCLAQGGRFLEIGK 669 (1392)
Q Consensus 630 i~~~T~g~GvDvVlds~--~~~-----~l~~s~~~La~~Gr~v~iG~ 669 (1392)
+.+... ..|+|+-+. .+. .-+..++.+++|.-+|++.-
T Consensus 108 l~~~l~--~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvai 152 (183)
T d1l7da1 108 VLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV 152 (183)
T ss_dssp HHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred HHHHHH--hhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEee
Confidence 444443 589999865 221 24688899999999999864
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=95.34 E-value=0.027 Score=63.13 Aligned_cols=58 Identities=22% Similarity=0.251 Sum_probs=42.3
Q ss_pred CCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1194 PPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1194 ~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
|.-|+.++++.+...+. . ..-+....++|+||||+.|||.|.+-- ..| +++.+-+++.
T Consensus 119 P~~t~~D~v~~~~~ll~-~-LGI~~l~~viG~SmGGmqAl~wA~~yP---d~v~~~v~ia~sa~ 177 (362)
T d2pl5a1 119 PFVSIQDMVKAQKLLVE-S-LGIEKLFCVAGGSMGGMQALEWSIAYP---NSLSNCIVMASTAE 177 (362)
T ss_dssp CCCCHHHHHHHHHHHHH-H-TTCSSEEEEEEETHHHHHHHHHHHHST---TSEEEEEEESCCSB
T ss_pred ccchhHHHHHHHHHHHH-H-hCcCeeEEEeehhHHHHHHHHHHHhCc---hHhhhhcccccccc
Confidence 34689999987755444 3 344667889999999999999997543 335 7887776553
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=95.29 E-value=0.015 Score=62.34 Aligned_cols=43 Identities=14% Similarity=0.220 Sum_probs=37.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIR 607 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~ 607 (1392)
+|.++||.||++|+|.+.++.....|++|+.+.++.++.+.+.
T Consensus 8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~ 50 (260)
T d1h5qa_ 8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVT 50 (260)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 5899999999999999999999999999999999877665443
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.28 E-value=0.093 Score=51.90 Aligned_cols=83 Identities=13% Similarity=0.151 Sum_probs=56.5
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
.++.+.+|.|+ |++|+..+.++...|+++|++++++. ...+..++.|+...... +-.+..+..+.++...
T Consensus 25 ~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~-------~rl~~a~~~Ga~~~~~~-~~~~~~~~~~~~~~~~- 94 (171)
T d1pl8a2 25 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSA-------TRLSKAKEIGADLVLQI-SKESPQEIARKVEGQL- 94 (171)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCH-------HHHHHHHHTTCSEEEEC-SSCCHHHHHHHHHHHH-
T ss_pred CCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCH-------HHHHHHHHhCCcccccc-cccccccccccccccC-
Confidence 45678888865 99999999999999998899988873 12333456687654443 3344444444443321
Q ss_pred cCCccEEEECccc
Q psy1119 859 LGPVDGIFNLAVV 871 (1392)
Q Consensus 859 ~g~I~gvi~~Agv 871 (1392)
-..+|.+|.++|.
T Consensus 95 g~g~Dvvid~~G~ 107 (171)
T d1pl8a2 95 GCKPEVTIECTGA 107 (171)
T ss_dssp TSCCSEEEECSCC
T ss_pred CCCceEEEeccCC
Confidence 1378999999984
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=95.28 E-value=0.021 Score=60.96 Aligned_cols=42 Identities=10% Similarity=0.025 Sum_probs=36.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q psy1119 568 SILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKT 609 (1392)
Q Consensus 568 tVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~ 609 (1392)
.+||.||++|+|.+...-....|++|+.+.+++++.+.+.+.
T Consensus 3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~ 44 (255)
T d1gega_ 3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASE 44 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 469999999999999988888999999999998887766543
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=95.26 E-value=0.037 Score=61.80 Aligned_cols=174 Identities=13% Similarity=0.107 Sum_probs=94.6
Q ss_pred CCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCCCC----------ccccC
Q psy1119 1195 PDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPDYV----------LTSLR 1263 (1392)
Q Consensus 1195 ~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~~~----------~~~l~ 1263 (1392)
.-|+.++++.....+. . ..=+.-..++|+||||+.|+|.|.+-- +.| +++.+.+++... ...+.
T Consensus 113 ~iti~D~v~aq~~Ll~-~-LGI~~l~~viG~SmGGmqAl~wa~~~P---d~v~~~i~i~~~a~~s~~~~~~~~~~~~aI~ 187 (357)
T d2b61a1 113 NIVVQDIVKVQKALLE-H-LGISHLKAIIGGSFGGMQANQWAIDYP---DFMDNIVNLCSSIYFSAEAIGFNHVMRQAVI 187 (357)
T ss_dssp CCCHHHHHHHHHHHHH-H-TTCCCEEEEEEETHHHHHHHHHHHHST---TSEEEEEEESCCSSCCHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHH-H-hCcceEEEEecccHHHHHHHHHHHhhh---HHHhhhcccccccccchhHHHHHHHHHHHHH
Confidence 4589999986655554 3 333556789999999999999999643 335 788777754321 11111
Q ss_pred CCCChH-----------H--HHHHHHh------------cCCccc----------cCCHHHHHHHHHH---------HHH
Q psy1119 1264 KLPDWN-----------A--KLNYFLD------------LMPEDA----------THSRTYQRNLAHA---------AYK 1299 (1392)
Q Consensus 1264 ~~~~~~-----------~--~l~~~~~------------~~~~~~----------~~~~~~l~~~~~~---------~~~ 1299 (1392)
..++|. . .+.+.+. .+.... ..-+.|++..... +..
T Consensus 188 ~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~rfDan~yl~ 267 (357)
T d2b61a1 188 NDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLH 267 (357)
T ss_dssp TSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred cCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHhhCCHHHHHH
Confidence 111111 1 1111111 111100 0013444433222 223
Q ss_pred HHHhhccccCCC--------CCcccceEEEEeeCCCC-CCChhhcCccccc---CCCeEEEEEcc--CccccccChHHHH
Q psy1119 1300 RITSILKYTDPK--------HKAFGGNITLLRPTEQA-LPTAEDYGLSKVC---KKPVKVHFVDG--NHFTVLDNIKSAQ 1365 (1392)
Q Consensus 1300 ~~~~~~~y~~~~--------~~~~~~pi~l~~a~~~~-~~~~~~~~W~~~~---~g~v~v~~v~G--~H~~ml~~~~~~~ 1365 (1392)
..++...|++.. ..+++++++++-.+.|. ..+++.....+.. ...++++++++ +|..++-+. .+
T Consensus 268 l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~GHdafL~e~--~~ 345 (357)
T d2b61a1 268 LLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAFLVDY--DQ 345 (357)
T ss_dssp HHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGGGHHHHCH--HH
T ss_pred HHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECCCCCccccCcCH--HH
Confidence 345555565542 25788999999888887 4444443333322 23477888886 687766543 34
Q ss_pred HHHhhhcccC
Q psy1119 1366 IIMHEDSTDF 1375 (1392)
Q Consensus 1366 i~~~l~~~L~ 1375 (1392)
+...|+..|+
T Consensus 346 ~~~~I~~fL~ 355 (357)
T d2b61a1 346 FEKRIRDGLA 355 (357)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 5556666654
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.21 E-value=0.031 Score=60.95 Aligned_cols=45 Identities=13% Similarity=0.290 Sum_probs=39.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q psy1119 564 QKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRK 608 (1392)
Q Consensus 564 ~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~ 608 (1392)
-+|.++||.||++|+|.+.++.....|++|+.+.++.++.+.+.+
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~ 54 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAAD 54 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 479999999999999999999888999999999999877655443
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=95.18 E-value=0.019 Score=62.61 Aligned_cols=43 Identities=16% Similarity=0.271 Sum_probs=38.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIR 607 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~ 607 (1392)
+|.++||.||++|+|.+.+......|++|+.+.++.++.+.+.
T Consensus 24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~ 66 (294)
T d1w6ua_ 24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATA 66 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence 5899999999999999999998999999999999987765443
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=95.17 E-value=0.019 Score=60.43 Aligned_cols=72 Identities=19% Similarity=0.277 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCc-eeeCCCccHHHHHHHHcCCCcceEEE
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEEN-IGNSRDTSFEQLVMKRTKGRGVDLVL 643 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~-i~~s~~~~~~~~i~~~T~g~GvDvVl 643 (1392)
+|.++||.||++|+|.+..+.....|++|+.+.+++++.+.. +... ..|-++ ..+.+.+..+ .+|+++
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~-------~~~~~~~Dv~~--~~~~~~~~~g--~iD~lV 71 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-------GHRYVVCDLRK--DLDLLFEKVK--EVDILV 71 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-------CSEEEECCTTT--CHHHHHHHSC--CCSEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc-------CCcEEEcchHH--HHHHHHHHhC--CCcEEE
Confidence 589999999999999999999999999999999987654332 2222 222222 2344555443 589988
Q ss_pred ecCc
Q psy1119 644 NSLA 647 (1392)
Q Consensus 644 ds~~ 647 (1392)
|+.+
T Consensus 72 nnAG 75 (234)
T d1o5ia_ 72 LNAG 75 (234)
T ss_dssp ECCC
T ss_pred eccc
Confidence 8764
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=95.17 E-value=0.01 Score=63.87 Aligned_cols=44 Identities=25% Similarity=0.266 Sum_probs=39.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRK 608 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~ 608 (1392)
+|.++||.||++|+|.+.++.....|++|+.+.+++++.+.+.+
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~ 47 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQ 47 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 68999999999999999999999999999999999888766654
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=95.10 E-value=0.023 Score=57.27 Aligned_cols=81 Identities=15% Similarity=0.217 Sum_probs=56.5
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
+.++.++||+||+||+|...++.....||+ ++.+.|+. +..+.+++.|+...+..-|-...+.+ ++..
T Consensus 27 v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~-vi~~~~~~-------~~~~~~~~~Ga~~vi~~~~~~~~~~~---~~~~- 94 (182)
T d1v3va2 27 VKGGETVLVSAAAGAVGSVVGQIAKLKGCK-VVGAAGSD-------EKIAYLKQIGFDAAFNYKTVNSLEEA---LKKA- 94 (182)
T ss_dssp CCSSCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESSH-------HHHHHHHHTTCSEEEETTSCSCHHHH---HHHH-
T ss_pred CCCCCEEEEEeCCCchhHHHHHHHHccCCE-EEEeCCCH-------HHHHHHHhhhhhhhcccccccHHHHH---HHHh-
Confidence 467889999999999999999999999997 66666652 12345566788766544444333333 3322
Q ss_pred hcCCccEEEECcc
Q psy1119 858 KLGPVDGIFNLAV 870 (1392)
Q Consensus 858 ~~g~I~gvi~~Ag 870 (1392)
.-..+|.||.+.|
T Consensus 95 ~~~Gvd~v~D~vG 107 (182)
T d1v3va2 95 SPDGYDCYFDNVG 107 (182)
T ss_dssp CTTCEEEEEESSC
T ss_pred hcCCCceeEEecC
Confidence 2246999999987
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.10 E-value=0.021 Score=57.49 Aligned_cols=81 Identities=19% Similarity=0.175 Sum_probs=54.2
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
+.++.++||+||+||+|...+++....|++.++ +.++. . ..+.+++.|+...+ |-.+++-.+++ .+..
T Consensus 23 ~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~-~~~~~----~---~~~~l~~~Ga~~vi---~~~~~~~~~~v-~~~t 90 (183)
T d1pqwa_ 23 LSPGERVLIHSATGGVGMAAVSIAKMIGARIYT-TAGSD----A---KREMLSRLGVEYVG---DSRSVDFADEI-LELT 90 (183)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEE-EESSH----H---HHHHHHTTCCSEEE---ETTCSTHHHHH-HHHT
T ss_pred CCCCCEEEEECCCCCcccccchhhcccccccee-eeccc----c---cccccccccccccc---cCCccCHHHHH-HHHh
Confidence 457789999999999999999999999998544 44442 1 23455677887443 33443333333 3322
Q ss_pred hcCCccEEEECcc
Q psy1119 858 KLGPVDGIFNLAV 870 (1392)
Q Consensus 858 ~~g~I~gvi~~Ag 870 (1392)
.-..+|.+|.+.|
T Consensus 91 ~~~g~d~v~d~~g 103 (183)
T d1pqwa_ 91 DGYGVDVVLNSLA 103 (183)
T ss_dssp TTCCEEEEEECCC
T ss_pred CCCCEEEEEeccc
Confidence 2236999999887
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.08 E-value=0.012 Score=66.39 Aligned_cols=86 Identities=17% Similarity=0.234 Sum_probs=61.4
Q ss_pred CCCceeEeecCCCccc-------cccHH----HHhhcC-CceEEEecCCCCCCCCHHHHHHHHHHHHhhhcc--------
Q psy1119 1155 GNNNTIFMVPGIEGIA-------TVLEP----LAKNIN-AQVLVFQFDHTNPPDTIPEMADSLLPHFKKRLV-------- 1214 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~-------~~y~~----La~~L~-~~~~v~~l~~e~~~~sieelA~~y~~~I~~~q~-------- 1214 (1392)
..+-|++++|+..|.. .+|.. +...|. ....||.. .-.|..|+++-|+.+...|+..+.
T Consensus 5 ~~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~-~V~p~~S~~~RA~eL~~~I~~~~~d~G~~hs~ 83 (388)
T d1ku0a_ 5 ANDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTL-AVGPLSSNWDRACEAYAQLVGGTVDYGAAHAA 83 (388)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEC-CCCSSBCHHHHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEe-ccCCccCHHHHHHHHHHHHhhhhhhhhHhHHh
Confidence 3457999999988753 23332 555553 23444444 345789999999999999974210
Q ss_pred ------------------CCCCcEEEEeechhHHHHHHHHHHHHH
Q psy1119 1215 ------------------HGTDEIKLVGFSFGGMVALELAIKLEQ 1241 (1392)
Q Consensus 1215 ------------------qp~gPy~L~G~S~Gg~VA~EmA~~Le~ 1241 (1392)
.+..|.+|+||||||+-+--++..|+.
T Consensus 84 ~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~ 128 (388)
T d1ku0a_ 84 KHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLEN 128 (388)
T ss_dssp HHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHH
T ss_pred hhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhcc
Confidence 123489999999999999999999975
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.01 E-value=0.021 Score=62.50 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s 599 (1392)
+|.++||.||++|+|.+..+.....||+|+.+..+
T Consensus 6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~ 40 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLG 40 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 58999999999999999999999999999988643
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=94.97 E-value=0.02 Score=60.83 Aligned_cols=78 Identities=18% Similarity=0.257 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHHHCCCCCcCce---eeCCCcc----HHHHHHHHcCC
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEK-REFIRKTFPFIKEENI---GNSRDTS----FEQLVMKRTKG 636 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek-~~~l~~~~p~l~~~~i---~~s~~~~----~~~~i~~~T~g 636 (1392)
+|.++||.||++|+|.+..+.....|++|+.+..++++ .+.+.+.+ +.... .|-.+.+ +.+.+.+..+
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~---g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G- 79 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL---GRRVLTVKCDVSQPGDVEAFGKQVISTFG- 79 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHc---CCcEEEEEeeCCCHHHHHHHHHHHHHHcC-
Confidence 58999999999999999999999999999998876543 22233332 32222 2333333 2222333322
Q ss_pred CcceEEEecCc
Q psy1119 637 RGVDLVLNSLA 647 (1392)
Q Consensus 637 ~GvDvVlds~~ 647 (1392)
++|+++|+.+
T Consensus 80 -~iDilVnnAG 89 (247)
T d2ew8a1 80 -RCDILVNNAG 89 (247)
T ss_dssp -CCCEEEECCC
T ss_pred -CCCEEEECCC
Confidence 5888888765
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.97 E-value=0.017 Score=62.20 Aligned_cols=45 Identities=18% Similarity=0.310 Sum_probs=40.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q psy1119 564 QKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRK 608 (1392)
Q Consensus 564 ~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~ 608 (1392)
-+|.++||.||++|+|.+........|++|+.+.++.++.+.+.+
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~ 56 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVS 56 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 469999999999999999999888999999999999988776654
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=94.96 E-value=0.021 Score=61.14 Aligned_cols=37 Identities=19% Similarity=0.300 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPE 601 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~e 601 (1392)
+|.++||.||++|+|.+.++-....|++|+.+.++.+
T Consensus 6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~ 42 (261)
T d1geea_ 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE 42 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcH
Confidence 5899999999999999999988899999999998754
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=94.93 E-value=0.042 Score=55.57 Aligned_cols=88 Identities=15% Similarity=0.091 Sum_probs=52.1
Q ss_pred cCCCCeEEE-EcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHH
Q psy1119 778 ADSNKSYII-CGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEA 856 (1392)
Q Consensus 778 ~~~~~~ylI-tGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~ 856 (1392)
+.++.+.+| +||+||+|++..+..-..||+.|+ +.|+....+ +..+.+++.|+...+..-+... .+....+.+.
T Consensus 26 ~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~-~v~~~~~~~---~~~~~~~~lGad~vi~~~~~~~-~~~~~~v~~~ 100 (189)
T d1gu7a2 26 LTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSIS-VIRDRPNLD---EVVASLKELGATQVITEDQNNS-REFGPTIKEW 100 (189)
T ss_dssp CCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEE-EECCCTTHH---HHHHHHHHHTCSEEEEHHHHHC-GGGHHHHHHH
T ss_pred CCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEE-EEecccccc---hHHhhhhhccccEEEeccccch-hHHHHHHHHH
Confidence 456666666 699999999998887788998444 445433322 3334455668765543221111 2222333333
Q ss_pred -h-hcCCccEEEECcc
Q psy1119 857 -N-KLGPVDGIFNLAV 870 (1392)
Q Consensus 857 -~-~~g~I~gvi~~Ag 870 (1392)
. .-+++|.+|.+.|
T Consensus 101 ~~~~g~~vdvv~D~vg 116 (189)
T d1gu7a2 101 IKQSGGEAKLALNCVG 116 (189)
T ss_dssp HHHHTCCEEEEEESSC
T ss_pred HhhccCCceEEEECCC
Confidence 2 2357999999876
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=94.90 E-value=0.18 Score=51.73 Aligned_cols=81 Identities=15% Similarity=0.251 Sum_probs=46.5
Q ss_pred ceeEeecC---CCccc--cccHHHHhhcC-CceEEEecC------C-CCCCCCHHHHHH--HHHHHHhhhccCCCCcEEE
Q psy1119 1158 NTIFMVPG---IEGIA--TVLEPLAKNIN-AQVLVFQFD------H-TNPPDTIPEMAD--SLLPHFKKRLVHGTDEIKL 1222 (1392)
Q Consensus 1158 ~pLF~vp~---agG~~--~~y~~La~~L~-~~~~v~~l~------~-e~~~~sieelA~--~y~~~I~~~q~qp~gPy~L 1222 (1392)
+-+++.|| .||+. .....+++.|. ..+.++.++ . ........+..+ ..++.++.. .....+..+
T Consensus 25 ~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~~~~e~~d~~aa~~~~~~~-~~~~~~~~~ 103 (218)
T d2i3da1 25 PIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHGAGELSDAASALDWVQSL-HPDSKSCWV 103 (218)
T ss_dssp CEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCSSHHHHHHHHHHHHHHHHH-CTTCCCEEE
T ss_pred CEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCccccccchhHHHHHHHHHhhhhcc-cccccceeE
Confidence 44677787 56664 33556777665 346666665 1 122222223222 223333322 334568999
Q ss_pred EeechhHHHHHHHHHHH
Q psy1119 1223 VGFSFGGMVALELAIKL 1239 (1392)
Q Consensus 1223 ~G~S~Gg~VA~EmA~~L 1239 (1392)
+||||||.+|..+|.+.
T Consensus 104 ~g~S~G~~~a~~~a~~~ 120 (218)
T d2i3da1 104 AGYSFGAWIGMQLLMRR 120 (218)
T ss_dssp EEETHHHHHHHHHHHHC
T ss_pred EeeehHHHHHHHHHHhh
Confidence 99999999988877653
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=94.89 E-value=0.033 Score=59.31 Aligned_cols=42 Identities=17% Similarity=0.143 Sum_probs=35.2
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q psy1119 565 KGESILIHAGSG--GVGQAAINLARYMDAEIFTTVGTPEKREFI 606 (1392)
Q Consensus 565 ~GetVLI~ga~G--gVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l 606 (1392)
+|.++||.||+| |+|.+..+-....|++|+.+.++++..+.+
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~ 50 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA 50 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH
Confidence 689999999987 899999998888999999888876544433
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=94.88 E-value=0.035 Score=58.02 Aligned_cols=81 Identities=17% Similarity=0.253 Sum_probs=48.9
Q ss_pred CceeEeecCCCccccccHHHHhhcCC-ceEEEecC----CCC----CC---------------CCHHHHHHHH---HHHH
Q psy1119 1157 NNTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFD----HTN----PP---------------DTIPEMADSL---LPHF 1209 (1392)
Q Consensus 1157 ~~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~----~e~----~~---------------~sieelA~~y---~~~I 1209 (1392)
.|-|+++|++.|....++.+++.|.. ...++..+ ... .. .+.+...++. ++.+
T Consensus 28 ~P~vl~~h~~~G~~~~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~aa~~~l 107 (233)
T d1dina_ 28 APVIVIAQEIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYA 107 (233)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHhcCCcceeeeeccCCCcCcccChHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 35578999999988888888888864 45555543 110 00 1222222222 2223
Q ss_pred hhhccCCCCcEEEEeechhHHHHHHHHHH
Q psy1119 1210 KKRLVHGTDEIKLVGFSFGGMVALELAIK 1238 (1392)
Q Consensus 1210 ~~~q~qp~gPy~L~G~S~Gg~VA~EmA~~ 1238 (1392)
+.. ....++..++|||+||.+|+.+|..
T Consensus 108 ~~~-~~~~~~i~~~G~s~Gg~~a~~~a~~ 135 (233)
T d1dina_ 108 RHQ-PYSNGKVGLVGYCLGGALAFLVAAK 135 (233)
T ss_dssp HTS-TTEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HhC-CCCCCceEEEEecccccceeecccc
Confidence 322 2234578899999999999988754
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=94.73 E-value=0.03 Score=56.00 Aligned_cols=81 Identities=19% Similarity=0.236 Sum_probs=54.7
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
+.++.+++|+||+||+|+..++.....||+ ++.+.++. .. .+.+++.|+...+ |-++++-.+++ .+..
T Consensus 26 l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~-Vi~~~~s~----~k---~~~~~~lGa~~vi---~~~~~d~~~~v-~~~t 93 (179)
T d1qora2 26 IKPDEQFLFHAAAGGVGLIACQWAKALGAK-LIGTVGTA----QK---AQSALKAGAWQVI---NYREEDLVERL-KEIT 93 (179)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTCE-EEEEESSH----HH---HHHHHHHTCSEEE---ETTTSCHHHHH-HHHT
T ss_pred CCCCCEEEEEccccccchHHHHHHHHhCCe-Eeecccch----HH---HHHHHhcCCeEEE---ECCCCCHHHHH-HHHh
Confidence 456889999999999999999999999997 66666663 11 2333455766433 55554433333 3332
Q ss_pred hcCCccEEEECcc
Q psy1119 858 KLGPVDGIFNLAV 870 (1392)
Q Consensus 858 ~~g~I~gvi~~Ag 870 (1392)
.-..+|.|+.+.|
T Consensus 94 ~g~g~d~v~d~~g 106 (179)
T d1qora2 94 GGKKVRVVYDSVG 106 (179)
T ss_dssp TTCCEEEEEECSC
T ss_pred CCCCeEEEEeCcc
Confidence 3347899999887
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=94.71 E-value=0.021 Score=60.53 Aligned_cols=102 Identities=10% Similarity=0.063 Sum_probs=68.4
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHCCCCC-cCceeeCCCccHHHHHHHHcC
Q psy1119 559 ICGQMQKGESILIHAGSGGVGQAAINLARYMD--AEIFTTVGTPEKREFIRKTFPFIK-EENIGNSRDTSFEQLVMKRTK 635 (1392)
Q Consensus 559 ~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~G--a~V~~tv~s~ek~~~l~~~~p~l~-~~~i~~s~~~~~~~~i~~~T~ 635 (1392)
...+++||++||=.|+ |-|..++.+|++.| .+|+++..+++..+.+++.+...+ ..++ .....++. +...
T Consensus 79 ~~l~i~pG~rVLEiG~--GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv-~~~~~Di~----~~~~ 151 (250)
T d1yb2a1 79 MRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRSDIA----DFIS 151 (250)
T ss_dssp --CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECSCTT----TCCC
T ss_pred HHcCCCCcCEEEEeee--eCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCce-EEEEeeee----cccc
Confidence 5678999999998744 34778888888865 589999999988888887543222 2222 11112221 2233
Q ss_pred CCcceEEE-ecCc-hhHHHHHHhcccCCeEEEEE
Q psy1119 636 GRGVDLVL-NSLA-EEKLQASVRCLAQGGRFLEI 667 (1392)
Q Consensus 636 g~GvDvVl-ds~~-~~~l~~s~~~La~~Gr~v~i 667 (1392)
...+|.|+ |... .+.+..+.++|+|||+++..
T Consensus 152 ~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~ 185 (250)
T d1yb2a1 152 DQMYDAVIADIPDPWNHVQKIASMMKPGSVATFY 185 (250)
T ss_dssp SCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEE
T ss_pred cceeeeeeecCCchHHHHHHHHHhcCCCceEEEE
Confidence 45799886 4443 35789999999999999864
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=94.69 E-value=0.038 Score=54.79 Aligned_cols=83 Identities=13% Similarity=0.185 Sum_probs=57.5
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
..++.+.+|+|++|++|+..++.+...|+++|+.++++. ...+.+++.|+...+ |-++.+-.+++.+..
T Consensus 25 ~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~-------~~~~~~~~~Ga~~~i---~~~~~~~~~~~~~~~- 93 (170)
T d1jvba2 25 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE-------EAVEAAKRAGADYVI---NASMQDPLAEIRRIT- 93 (170)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSH-------HHHHHHHHHTCSEEE---ETTTSCHHHHHHHHT-
T ss_pred CCCCCEEEEEeccccceeeeeecccccccccccccccch-------hhHHHHHHcCCceee---ccCCcCHHHHHHHHh-
Confidence 456789999999999999999999999998899888873 123334456776443 333333344443332
Q ss_pred hcCCccEEEECccc
Q psy1119 858 KLGPVDGIFNLAVV 871 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv 871 (1392)
.-+.+|.+|.++|.
T Consensus 94 ~~~~~d~vid~~g~ 107 (170)
T d1jvba2 94 ESKGVDAVIDLNNS 107 (170)
T ss_dssp TTSCEEEEEESCCC
T ss_pred hcccchhhhccccc
Confidence 22469999999884
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=94.68 E-value=0.044 Score=58.26 Aligned_cols=81 Identities=14% Similarity=0.208 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH---HHHCCCCCcCc-eeeCC-Cc-c---HHHHHHHHcC
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFI---RKTFPFIKEEN-IGNSR-DT-S---FEQLVMKRTK 635 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l---~~~~p~l~~~~-i~~s~-~~-~---~~~~i~~~T~ 635 (1392)
+|.+|||.||++|+|.++.......||+|+.+.++.++.+.+ +...+...... ..|.. +. + +.+.+.+..+
T Consensus 4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g 83 (254)
T d1sbya1 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence 589999999999999999998899999999888766554433 34443222211 12221 22 2 2333434332
Q ss_pred CCcceEEEecCc
Q psy1119 636 GRGVDLVLNSLA 647 (1392)
Q Consensus 636 g~GvDvVlds~~ 647 (1392)
++|+++|+.+
T Consensus 84 --~iDilvnnAG 93 (254)
T d1sbya1 84 --TVDILINGAG 93 (254)
T ss_dssp --CCCEEEECCC
T ss_pred --CCCEEEeCCC
Confidence 6999999875
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=94.66 E-value=0.028 Score=60.14 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=35.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHH
Q psy1119 564 QKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTP-EKREFI 606 (1392)
Q Consensus 564 ~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~-ek~~~l 606 (1392)
-+|.++||.||++|+|.+..+.....|++|+.+.+++ ++.+.+
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~ 45 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKV 45 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH
Confidence 3689999999999999999998889999999998864 444333
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=94.66 E-value=0.026 Score=60.52 Aligned_cols=101 Identities=18% Similarity=0.234 Sum_probs=71.2
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHCCCCCc--CceeeCCCccHHHHHHHHc
Q psy1119 559 ICGQMQKGESILIHAGSGGVGQAAINLARYMD--AEIFTTVGTPEKREFIRKTFPFIKE--ENIGNSRDTSFEQLVMKRT 634 (1392)
Q Consensus 559 ~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~G--a~V~~tv~s~ek~~~l~~~~p~l~~--~~i~~s~~~~~~~~i~~~T 634 (1392)
...+++||++||=.|. | .|..++.+|+..| ++|+++..+++..+.+++.+...+. ...+..++. ....
T Consensus 97 ~~l~i~pG~~VLDiG~-G-sG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d~------~~~~ 168 (266)
T d1o54a_ 97 MMLDVKEGDRIIDTGV-G-SGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDI------SEGF 168 (266)
T ss_dssp HHTTCCTTCEEEEECC-T-TSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCG------GGCC
T ss_pred HhhCCCCCCEEEECCC-C-CCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEeccc------cccc
Confidence 5678999999998743 3 3788888999875 6899999999888888765433332 222233331 1223
Q ss_pred CCCcceEEEecCc--hhHHHHHHhcccCCeEEEEE
Q psy1119 635 KGRGVDLVLNSLA--EEKLQASVRCLAQGGRFLEI 667 (1392)
Q Consensus 635 ~g~GvDvVlds~~--~~~l~~s~~~La~~Gr~v~i 667 (1392)
....+|.|+--+. .+.++.+.++|+|||+++.+
T Consensus 169 ~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~ 203 (266)
T d1o54a_ 169 DEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATV 203 (266)
T ss_dssp SCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEE
T ss_pred cccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEE
Confidence 4456888766554 35789999999999999864
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.57 E-value=0.033 Score=60.28 Aligned_cols=116 Identities=13% Similarity=0.136 Sum_probs=75.7
Q ss_pred CCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcC
Q psy1119 537 QWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEE 616 (1392)
Q Consensus 537 ~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~ 616 (1392)
+.|+++|--- -..-+....++++|++||=.| .|.|..++.+|+..||+|.++.-|+++.+++++.....+-.
T Consensus 40 ~~tL~eAQ~~------k~~~~~~~l~l~~G~~VLDiG--CG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~ 111 (285)
T d1kpga_ 40 DMTLQEAQIA------KIDLALGKLGLQPGMTLLDVG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENL 111 (285)
T ss_dssp TCCHHHHHHH------HHHHHHTTTTCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCC
T ss_pred CCCHHHHHHH------HHHHHHHHcCCCCCCEEEEec--CcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhh
Confidence 4477765421 233445778999999999884 36789999999999999999999999998887643112211
Q ss_pred ceeeCCCccHHHHHHHHcCCCcceEEEe-----cCch----hHHHHHHhcccCCeEEEE
Q psy1119 617 NIGNSRDTSFEQLVMKRTKGRGVDLVLN-----SLAE----EKLQASVRCLAQGGRFLE 666 (1392)
Q Consensus 617 ~i~~s~~~~~~~~i~~~T~g~GvDvVld-----s~~~----~~l~~s~~~La~~Gr~v~ 666 (1392)
.-+.....++ +..+ ..+|.|+. .++. ..+....++|+|+|+++.
T Consensus 112 ~~v~~~~~d~-----~~~~-~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l 164 (285)
T d1kpga_ 112 RSKRVLLAGW-----EQFD-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLL 164 (285)
T ss_dssp SCEEEEESCG-----GGCC-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred hhhHHHHhhh-----hccc-ccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEE
Confidence 1111111111 1123 25887764 2322 357788899999999985
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=94.51 E-value=0.018 Score=61.12 Aligned_cols=41 Identities=24% Similarity=0.319 Sum_probs=33.4
Q ss_pred CEEEEEcCCchHHHHHHHHHH---HcCCEEEEEecChhhHHHHH
Q psy1119 567 ESILIHAGSGGVGQAAINLAR---YMDAEIFTTVGTPEKREFIR 607 (1392)
Q Consensus 567 etVLI~ga~GgVG~aaIqlA~---~~Ga~V~~tv~s~ek~~~l~ 607 (1392)
.+|||.||++|+|.+.++... ..|++|+.+++++++.+.+.
T Consensus 3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~ 46 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE 46 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 489999999999999876543 46899999999887765554
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=94.28 E-value=0.025 Score=58.58 Aligned_cols=101 Identities=18% Similarity=0.173 Sum_probs=66.5
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHCCCCCcCceee-CCCccHHHHHHHHcC
Q psy1119 559 ICGQMQKGESILIHAGSGGVGQAAINLARYMD--AEIFTTVGTPEKREFIRKTFPFIKEENIGN-SRDTSFEQLVMKRTK 635 (1392)
Q Consensus 559 ~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~G--a~V~~tv~s~ek~~~l~~~~p~l~~~~i~~-s~~~~~~~~i~~~T~ 635 (1392)
....+++|++||-.|+ | .|..++.+|+..| .+|+++..+++..+.+++.+...+.+++.- ..+.. +. ...
T Consensus 69 ~~l~l~~g~~VLdiG~-G-tG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~--~~---~~~ 141 (213)
T d1dl5a1 69 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGY--YG---VPE 141 (213)
T ss_dssp HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG--GC---CGG
T ss_pred HhhhccccceEEEecC-c-cchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchH--Hc---ccc
Confidence 5668999999999854 4 3788888998876 589999988887777776543223332221 11111 00 011
Q ss_pred CCcceEEEecCch-hHHHHHHhcccCCeEEEE
Q psy1119 636 GRGVDLVLNSLAE-EKLQASVRCLAQGGRFLE 666 (1392)
Q Consensus 636 g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~ 666 (1392)
...+|+|+...+- +..+..++.|+|||++|.
T Consensus 142 ~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~ 173 (213)
T d1dl5a1 142 FSPYDVIFVTVGVDEVPETWFTQLKEGGRVIV 173 (213)
T ss_dssp GCCEEEEEECSBBSCCCHHHHHHEEEEEEEEE
T ss_pred ccchhhhhhhccHHHhHHHHHHhcCCCcEEEE
Confidence 2359999876553 334667789999999986
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.19 E-value=0.071 Score=57.73 Aligned_cols=114 Identities=14% Similarity=0.091 Sum_probs=74.6
Q ss_pred CCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCC--CCC
Q psy1119 537 QWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFP--FIK 614 (1392)
Q Consensus 537 ~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p--~l~ 614 (1392)
+-|+++|-- .-+.-+...+++++|++||=.|. |.|..++.+|+..||+|+++.-|+++.++.++... ++.
T Consensus 39 ~~tL~~Aq~------~k~~~~~~~l~l~~G~~VLDiGC--G~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~ 110 (291)
T d1kpia_ 39 DMTLEEAQY------AKRKLALDKLNLEPGMTLLDIGC--GWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSP 110 (291)
T ss_dssp TCCHHHHHH------HHHHHHHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCS
T ss_pred CCCHHHHHH------HHHHHHHHhcCCCCCCEEEEecC--cchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccc
Confidence 346776532 12334557889999999998843 45667889999999999999989988777665422 222
Q ss_pred cCceeeCCCccHHHHHHHHcCCCcceEEEec-----Cc-----------hhHHHHHHhcccCCeEEEE
Q psy1119 615 EENIGNSRDTSFEQLVMKRTKGRGVDLVLNS-----LA-----------EEKLQASVRCLAQGGRFLE 666 (1392)
Q Consensus 615 ~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds-----~~-----------~~~l~~s~~~La~~Gr~v~ 666 (1392)
....+...+.. ..+ ..+|.|+.. ++ ...++...++|+|||+++.
T Consensus 111 ~~v~~~~~d~~-------~~~-~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l 170 (291)
T d1kpia_ 111 RRKEVRIQGWE-------EFD-EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 170 (291)
T ss_dssp SCEEEEECCGG-------GCC-CCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEE
T ss_pred hhhhhhhhccc-------ccc-cccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEE
Confidence 22222222211 122 359988752 22 1357788899999999984
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=94.16 E-value=0.021 Score=60.86 Aligned_cols=78 Identities=5% Similarity=-0.043 Sum_probs=50.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCC-ccHHHHHHHHcCCCcceEEEecC
Q psy1119 568 SILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRD-TSFEQLVMKRTKGRGVDLVLNSL 646 (1392)
Q Consensus 568 tVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~-~~~~~~i~~~T~g~GvDvVlds~ 646 (1392)
|+||.||++|+|.+...-....|++|+.+.++.++.+.+.+.......-.+.+..+ ..+.+.+.+..+ ++|+++|+.
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G--~iDiLVnNA 79 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYG--QVDVLVSND 79 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHS--CCCEEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcC--CCCEEEECC
Confidence 78999999999999999888899999999888777766654211111112222222 123344444433 588888754
Q ss_pred c
Q psy1119 647 A 647 (1392)
Q Consensus 647 ~ 647 (1392)
+
T Consensus 80 g 80 (252)
T d1zmta1 80 I 80 (252)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=94.13 E-value=0.26 Score=48.35 Aligned_cols=84 Identities=18% Similarity=0.155 Sum_probs=54.1
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEe-ccCCCHHHHHHHHHHH
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLIST-DDITTEAGVVNLLTEA 856 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~-~Dv~~~~~v~~l~~~~ 856 (1392)
+.++.+.+|+| +|++|+..++++...|++ ++.+.++. ...+..++.|+...+.. -.-.+..++.+.+...
T Consensus 24 ~~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~-vi~v~~~~-------~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~ 94 (170)
T d1e3ja2 24 VQLGTTVLVIG-AGPIGLVSVLAAKAYGAF-VVCTARSP-------RRLEVAKNCGADVTLVVDPAKEEESSIIERIRSA 94 (170)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCE-EEEEESCH-------HHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHH
T ss_pred CCCCCEEEEEc-ccccchhhHhhHhhhccc-ccccchHH-------HHHHHHHHcCCcEEEeccccccccchhhhhhhcc
Confidence 34677889986 799999999999999996 77788773 12344455677654432 2223334444333332
Q ss_pred hhcCCccEEEECccc
Q psy1119 857 NKLGPVDGIFNLAVV 871 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv 871 (1392)
. -..+|.+|.++|.
T Consensus 95 ~-g~g~D~vid~~g~ 108 (170)
T d1e3ja2 95 I-GDLPNVTIDCSGN 108 (170)
T ss_dssp S-SSCCSEEEECSCC
T ss_pred c-ccCCceeeecCCC
Confidence 1 1368999999984
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=94.12 E-value=0.073 Score=52.64 Aligned_cols=72 Identities=13% Similarity=0.237 Sum_probs=54.6
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCC
Q psy1119 559 ICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGR 637 (1392)
Q Consensus 559 ~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~ 637 (1392)
...++.++.+|||.|+ ||.+.+++..++..|+ +|+.+.++.+|.+.+.+.++ ... ++... ..
T Consensus 10 ~~~~~~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~---~~~-~~~~~------------~~ 72 (167)
T d1npya1 10 EKYHLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG---YAY-INSLE------------NQ 72 (167)
T ss_dssp HHTTCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT---CEE-ESCCT------------TC
T ss_pred HHcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhh---hhh-hhccc------------cc
Confidence 5556778899999955 9999999999999998 68889999999999888653 221 22111 13
Q ss_pred cceEEEecCc
Q psy1119 638 GVDLVLNSLA 647 (1392)
Q Consensus 638 GvDvVlds~~ 647 (1392)
.+|+|+||.+
T Consensus 73 ~~DliINaTp 82 (167)
T d1npya1 73 QADILVNVTS 82 (167)
T ss_dssp CCSEEEECSS
T ss_pred chhhheeccc
Confidence 5899999875
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.07 E-value=0.036 Score=56.70 Aligned_cols=74 Identities=18% Similarity=0.095 Sum_probs=51.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEec
Q psy1119 566 GESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNS 645 (1392)
Q Consensus 566 GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds 645 (1392)
..+|+|.||+|.+|.+++..+...|.+|.+.+++++|...... .+. .++.-+-.+ .+.+.+... |+|+|+++
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~----~~~-~~~~gD~~d-~~~l~~al~--~~d~vi~~ 74 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP----RPA-HVVVGDVLQ-AADVDKTVA--GQDAVIVL 74 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSC----CCS-EEEESCTTS-HHHHHHHHT--TCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccc----ccc-ccccccccc-hhhHHHHhc--CCCEEEEE
Confidence 4789999999999999999999999999999998887532211 122 233222222 223444443 68999998
Q ss_pred Cc
Q psy1119 646 LA 647 (1392)
Q Consensus 646 ~~ 647 (1392)
++
T Consensus 75 ~g 76 (205)
T d1hdoa_ 75 LG 76 (205)
T ss_dssp CC
T ss_pred ec
Confidence 75
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=94.04 E-value=0.033 Score=58.78 Aligned_cols=104 Identities=14% Similarity=0.002 Sum_probs=69.0
Q ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCc-e-eeCCCccHHHHHHHH
Q psy1119 556 AMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEEN-I-GNSRDTSFEQLVMKR 633 (1392)
Q Consensus 556 aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~-i-~~s~~~~~~~~i~~~ 633 (1392)
.|....+++||++||=.|. |.|..+..+|+..|++|+++.-|++..+.+++.....+... + +...+ + .+.
T Consensus 24 ~l~~~~~l~pg~~VLDiGC--G~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d--~----~~~ 95 (245)
T d1nkva_ 24 TLGRVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHND--A----AGY 95 (245)
T ss_dssp HHHHHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--C----TTC
T ss_pred HHHHHcCCCCCCEEEEEcC--CCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhH--H----hhc
Confidence 4557789999999997743 44667788899899999999999887776665421122111 1 11111 1 112
Q ss_pred cCCCcceEEEecCc-------hhHHHHHHhcccCCeEEEEE
Q psy1119 634 TKGRGVDLVLNSLA-------EEKLQASVRCLAQGGRFLEI 667 (1392)
Q Consensus 634 T~g~GvDvVlds~~-------~~~l~~s~~~La~~Gr~v~i 667 (1392)
.....+|+|+-... ...+....++|+|||+++..
T Consensus 96 ~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~ 136 (245)
T d1nkva_ 96 VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIG 136 (245)
T ss_dssp CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEE
T ss_pred cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEE
Confidence 33457999985321 34678888999999999863
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.98 E-value=0.0064 Score=64.39 Aligned_cols=38 Identities=18% Similarity=0.213 Sum_probs=34.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEK 602 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek 602 (1392)
+|.++||.||++|+|.+.++.....|++|+.+.+++++
T Consensus 6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~ 43 (237)
T d1uzma1 6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA 43 (237)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch
Confidence 68999999999999999999999999999999987654
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.98 E-value=0.04 Score=58.28 Aligned_cols=45 Identities=22% Similarity=0.127 Sum_probs=40.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKT 609 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~ 609 (1392)
+|.++||.||++|+|.+.++-....|++|+.+.+++++.+.+.+.
T Consensus 4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~ 48 (248)
T d2o23a1 4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK 48 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Confidence 799999999999999999999999999999999988887776664
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=93.87 E-value=0.0081 Score=63.45 Aligned_cols=36 Identities=11% Similarity=0.289 Sum_probs=32.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q psy1119 566 GESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPE 601 (1392)
Q Consensus 566 GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~e 601 (1392)
+.+|||.||++|+|.+.++.....|++|+.+..+++
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~ 37 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN 37 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCch
Confidence 457999999999999999999999999999987654
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=93.85 E-value=0.083 Score=51.76 Aligned_cols=73 Identities=19% Similarity=0.266 Sum_probs=50.9
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
..++.++|.|+ |++|..++++|..+|++++.++.|+.. .+....+ ..|.++. +.+++.+.
T Consensus 22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~---ka~~l~~---~~~~~~~-------~~~~~~~~------ 81 (159)
T d1gpja2 22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYE---RAVELAR---DLGGEAV-------RFDELVDH------ 81 (159)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHH---HHHHHHH---HHTCEEC-------CGGGHHHH------
T ss_pred cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHH---HHHHHHH---hhhcccc-------cchhHHHH------
Confidence 46889999987 999999999999999999999999842 2222333 2354432 12233322
Q ss_pred cCCccEEEECccc
Q psy1119 859 LGPVDGIFNLAVV 871 (1392)
Q Consensus 859 ~g~I~gvi~~Agv 871 (1392)
+...|.||++.+.
T Consensus 82 l~~~Divi~atss 94 (159)
T d1gpja2 82 LARSDVVVSATAA 94 (159)
T ss_dssp HHTCSEEEECCSS
T ss_pred hccCCEEEEecCC
Confidence 2368999999874
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=93.82 E-value=0.055 Score=60.76 Aligned_cols=57 Identities=21% Similarity=0.179 Sum_probs=41.1
Q ss_pred CCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeCCCC
Q psy1119 1195 PDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDSAPD 1256 (1392)
Q Consensus 1195 ~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~~p~ 1256 (1392)
.-|+.+|++.....+. . +.=+.-+.++|+||||+.|+|+|.+--. .| +++.|.+++.
T Consensus 114 ~~ti~D~v~aq~~ll~-~-LGI~~l~aViG~SmGGmqal~wa~~~Pd---~v~~li~Ia~~~~ 171 (376)
T d2vata1 114 RTTIRDDVRIHRQVLD-R-LGVRQIAAVVGASMGGMHTLEWAFFGPE---YVRKIVPIATSCR 171 (376)
T ss_dssp CCCHHHHHHHHHHHHH-H-HTCCCEEEEEEETHHHHHHHHHGGGCTT---TBCCEEEESCCSB
T ss_pred cchhHHHHHHHHHHHH-H-hCcceEEEeecccHHHHHHHHHHHhchH---HHhhhcccccccc
Confidence 3589999987654443 3 2235568999999999999999986432 34 7888877653
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=93.72 E-value=0.058 Score=53.65 Aligned_cols=81 Identities=15% Similarity=0.117 Sum_probs=55.9
Q ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcC
Q psy1119 556 AMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTK 635 (1392)
Q Consensus 556 aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~ 635 (1392)
+|....-..+|.+|+|.|+ ||.+.+++..+...+.+|+.+.++.++.+.+.+.|............ ...
T Consensus 8 ~l~~~~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~----------~~~ 76 (171)
T d1p77a1 8 DLQRLNWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMD----------SIP 76 (171)
T ss_dssp HHHHTTCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG----------GCC
T ss_pred HHHHcCCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhc----------ccc
Confidence 3444444458999999955 99999999877777789999999999998888766322221111111 112
Q ss_pred CCcceEEEecCc
Q psy1119 636 GRGVDLVLNSLA 647 (1392)
Q Consensus 636 g~GvDvVlds~~ 647 (1392)
-..+|+++||++
T Consensus 77 ~~~~diiIN~tp 88 (171)
T d1p77a1 77 LQTYDLVINATS 88 (171)
T ss_dssp CSCCSEEEECCC
T ss_pred ccccceeeeccc
Confidence 246899999886
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=93.70 E-value=0.036 Score=55.17 Aligned_cols=76 Identities=12% Similarity=0.132 Sum_probs=51.7
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
+.++.+++|+||+|++|+..++..-..|++ ++.+.++..+. +.+++.|+...+ |..+ ..++..
T Consensus 25 ~~~g~~VlI~ga~G~vG~~aiqlak~~G~~-vi~~~~~~~~~-------~~~~~lGa~~~i---~~~~------~~~~~~ 87 (171)
T d1iz0a2 25 ARPGEKVLVQAAAGALGTAAVQVARAMGLR-VLAAASRPEKL-------ALPLALGAEEAA---TYAE------VPERAK 87 (171)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCE-EEEEESSGGGS-------HHHHHTTCSEEE---EGGG------HHHHHH
T ss_pred CCCCCEEEEEeccccchhhhhhhhcccccc-ccccccccccc-------ccccccccceee---ehhh------hhhhhh
Confidence 457889999999999999999988888997 56566664322 233456876443 2222 123333
Q ss_pred hcCCccEEEECcc
Q psy1119 858 KLGPVDGIFNLAV 870 (1392)
Q Consensus 858 ~~g~I~gvi~~Ag 870 (1392)
....+|.||.+.|
T Consensus 88 ~~~g~D~v~d~~G 100 (171)
T d1iz0a2 88 AWGGLDLVLEVRG 100 (171)
T ss_dssp HTTSEEEEEECSC
T ss_pred ccccccccccccc
Confidence 4457999999876
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=93.67 E-value=0.15 Score=55.11 Aligned_cols=42 Identities=10% Similarity=-0.009 Sum_probs=29.2
Q ss_pred cccceEEEEeeCCCC-CCChhhcCcccccCCCeEEEEEcc-Ccc
Q psy1119 1314 AFGGNITLLRPTEQA-LPTAEDYGLSKVCKKPVKVHFVDG-NHF 1355 (1392)
Q Consensus 1314 ~~~~pi~l~~a~~~~-~~~~~~~~W~~~~~g~v~v~~v~G-~H~ 1355 (1392)
++++|++++.+..|. ...+.....-+...++.+++.+|| +|-
T Consensus 260 ~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~~~~l~~~p~~~H~ 303 (322)
T d1vlqa_ 260 RAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHE 303 (322)
T ss_dssp TCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTT
T ss_pred cCCCCEEEEEeCCCCCcCHHHHHHHHHHCCCCeEEEEECCCCCC
Confidence 678999999999987 444433332233456788999986 774
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=93.67 E-value=0.058 Score=57.56 Aligned_cols=79 Identities=18% Similarity=0.079 Sum_probs=50.8
Q ss_pred ceeEeecCCC---ccccccHHHHhhcC-CceEEEecC-CCCCCCCHHHHHHHHHHHHhhhccCCCCcEEEEeechhHHHH
Q psy1119 1158 NTIFMVPGIE---GIATVLEPLAKNIN-AQVLVFQFD-HTNPPDTIPEMADSLLPHFKKRLVHGTDEIKLVGFSFGGMVA 1232 (1392)
Q Consensus 1158 ~pLF~vp~ag---G~~~~y~~La~~L~-~~~~v~~l~-~e~~~~sieelA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA 1232 (1392)
|-+++||+++ |....|..+++.|. ..+.|+.++ .-.+..+..+..++..+.++...-+.+++..|+|||+||.+|
T Consensus 63 P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl~p~~~~p~~~~d~~~a~~~~~~~~~~rI~l~G~SaGG~la 142 (261)
T d2pbla1 63 GLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVRISEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLV 142 (261)
T ss_dssp EEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHSCSCEEEEEETHHHHHH
T ss_pred CeEEEECCCCCccCChhHhhhHHHHHhcCCceeecccccccccccCchhHHHHHHHHHHHHhcccCceEEEEcchHHHHH
Confidence 3456788743 44466667777764 356677766 334455677777666665543221234689999999999998
Q ss_pred HHHH
Q psy1119 1233 LELA 1236 (1392)
Q Consensus 1233 ~EmA 1236 (1392)
..++
T Consensus 143 ~~~~ 146 (261)
T d2pbla1 143 ARML 146 (261)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 6554
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=93.64 E-value=0.055 Score=57.95 Aligned_cols=38 Identities=16% Similarity=0.023 Sum_probs=33.7
Q ss_pred CCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecChh
Q psy1119 564 QKGESILIHAGSG--GVGQAAINLARYMDAEIFTTVGTPE 601 (1392)
Q Consensus 564 ~~GetVLI~ga~G--gVG~aaIqlA~~~Ga~V~~tv~s~e 601 (1392)
-+|.++||.||+| |||.+.++.....|++|+.+.++++
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~ 42 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES 42 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3699999999877 8999999999999999999998753
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=93.54 E-value=0.11 Score=51.41 Aligned_cols=80 Identities=13% Similarity=0.157 Sum_probs=54.4
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
.++.+++|.| .|++|...++++...|+++++.++++. ...+..++.|+...+ |- +.+.++...+...
T Consensus 31 ~~g~~vli~G-aG~vG~~~~~~a~~~g~~~vv~~~~~~-------~k~~~~~~~ga~~~i---~~-~~~~~~~~~~~~~- 97 (172)
T d1h2ba2 31 YPGAYVAIVG-VGGLGHIAVQLLKVMTPATVIALDVKE-------EKLKLAERLGADHVV---DA-RRDPVKQVMELTR- 97 (172)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEESSH-------HHHHHHHHTTCSEEE---ET-TSCHHHHHHHHTT-
T ss_pred CCCCEEEEeC-CChHHHHHHHHHHhhcCcccccccchh-------HHHHHHhhcccceee---cC-cccHHHHHHHhhC-
Confidence 4677888886 499999999999999999888888773 223445566765433 22 2234444444332
Q ss_pred cCCccEEEECccc
Q psy1119 859 LGPVDGIFNLAVV 871 (1392)
Q Consensus 859 ~g~I~gvi~~Agv 871 (1392)
-..+|.+|.++|.
T Consensus 98 ~~g~d~vid~~g~ 110 (172)
T d1h2ba2 98 GRGVNVAMDFVGS 110 (172)
T ss_dssp TCCEEEEEESSCC
T ss_pred CCCceEEEEecCc
Confidence 2369999999984
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=93.48 E-value=0.066 Score=56.31 Aligned_cols=42 Identities=19% Similarity=0.161 Sum_probs=35.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCE-------EEEEecChhhHHHHHHH
Q psy1119 568 SILIHAGSGGVGQAAINLARYMDAE-------IFTTVGTPEKREFIRKT 609 (1392)
Q Consensus 568 tVLI~ga~GgVG~aaIqlA~~~Ga~-------V~~tv~s~ek~~~l~~~ 609 (1392)
.|||.||++|+|.+........|++ |+.+.++.++.+.+.+.
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~ 51 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLE 51 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHH
Confidence 4799999999999999888888887 78888888887766553
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=93.47 E-value=0.085 Score=52.44 Aligned_cols=81 Identities=19% Similarity=0.209 Sum_probs=54.0
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
..++.+++|.|+ |++|+..++.+...|+++++.++++. . ..+..++.|+.-.+ |..+.+ +.+.+.+..
T Consensus 26 ~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~----~---k~~~a~~~Ga~~~i---~~~~~~-~~~~i~~~t 93 (174)
T d1f8fa2 26 VTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVE----S---RLELAKQLGATHVI---NSKTQD-PVAAIKEIT 93 (174)
T ss_dssp CCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCH----H---HHHHHHHHTCSEEE---ETTTSC-HHHHHHHHT
T ss_pred CCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHH----H---HHHHHHHcCCeEEE---eCCCcC-HHHHHHHHc
Confidence 467888999976 99999999999999999888887763 1 22333455754322 344433 333333332
Q ss_pred hcCCccEEEECccc
Q psy1119 858 KLGPVDGIFNLAVV 871 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv 871 (1392)
-+.+|.+|.+.|.
T Consensus 94 -~gg~D~vid~~G~ 106 (174)
T d1f8fa2 94 -DGGVNFALESTGS 106 (174)
T ss_dssp -TSCEEEEEECSCC
T ss_pred -CCCCcEEEEcCCc
Confidence 2479999999984
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=93.31 E-value=0.53 Score=45.68 Aligned_cols=79 Identities=13% Similarity=0.134 Sum_probs=55.5
Q ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHc
Q psy1119 556 AMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRT 634 (1392)
Q Consensus 556 aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T 634 (1392)
+....+. -.+.+|||.|+ |.+|.++++.....|+ +++++.++.+|.+.+.+.|+ . ++.+. .++.+.+
T Consensus 15 a~~~~~~-l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~---~-~~~~~--~~~~~~l---- 82 (159)
T d1gpja2 15 AERELGS-LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---G-EAVRF--DELVDHL---- 82 (159)
T ss_dssp HHHHHSC-CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---C-EECCG--GGHHHHH----
T ss_pred HHHHhCC-cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh---c-ccccc--hhHHHHh----
Confidence 4433444 46889999966 9999999998888999 58888889888887777653 1 22221 2333333
Q ss_pred CCCcceEEEecCch
Q psy1119 635 KGRGVDLVLNSLAE 648 (1392)
Q Consensus 635 ~g~GvDvVlds~~~ 648 (1392)
..+|+|++|++.
T Consensus 83 --~~~Divi~atss 94 (159)
T d1gpja2 83 --ARSDVVVSATAA 94 (159)
T ss_dssp --HTCSEEEECCSS
T ss_pred --ccCCEEEEecCC
Confidence 258999998864
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=93.25 E-value=0.06 Score=50.94 Aligned_cols=72 Identities=17% Similarity=0.279 Sum_probs=50.4
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGP 861 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~ 861 (1392)
|.|+|.|+ |-+|+.+|++|.++|.. ++++..+. +.+++++..|..+ +.+|.++++.++++ ....
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~-vvvid~d~-------~~~~~~~~~~~~~--~~gd~~~~~~l~~a-----~i~~ 64 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHE-VLAVDINE-------EKVNAYASYATHA--VIANATEENELLSL-----GIRN 64 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCC-CEEEESCH-------HHHHHTTTTCSEE--EECCTTCTTHHHHH-----TGGG
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCe-EEEecCcH-------HHHHHHHHhCCcc--eeeecccchhhhcc-----CCcc
Confidence 56899955 89999999999999998 66666652 3455667778655 45899998876643 1123
Q ss_pred ccEEEECc
Q psy1119 862 VDGIFNLA 869 (1392)
Q Consensus 862 I~gvi~~A 869 (1392)
.+.+|-+.
T Consensus 65 a~~vi~~~ 72 (134)
T d2hmva1 65 FEYVIVAI 72 (134)
T ss_dssp CSEEEECC
T ss_pred ccEEEEEc
Confidence 56665544
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.22 E-value=0.074 Score=57.32 Aligned_cols=116 Identities=13% Similarity=0.146 Sum_probs=74.0
Q ss_pred CCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcC
Q psy1119 537 QWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEE 616 (1392)
Q Consensus 537 ~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~ 616 (1392)
+-|+++|-- .-+.-+....++++|++||=.|. | .|..+..+|+..|++|+++.-|+++.+++++.....+..
T Consensus 30 ~~tL~~AQ~------~k~~~~~~~l~l~~g~~VLDiGC-G-~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~ 101 (280)
T d2fk8a1 30 ELTLEEAQY------AKVDLNLDKLDLKPGMTLLDIGC-G-WGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTN 101 (280)
T ss_dssp TCCHHHHHH------HHHHHHHTTSCCCTTCEEEEESC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCS
T ss_pred CCCHHHHHH------HHHHHHHHHcCCCCCCEEEEecC-C-chHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccc
Confidence 346776642 12334557778999999998843 3 345677889999999999999999988887654222322
Q ss_pred ceeeCCCccHHHHHHHHcCCCcceEEEe-----cCch----hHHHHHHhcccCCeEEEE
Q psy1119 617 NIGNSRDTSFEQLVMKRTKGRGVDLVLN-----SLAE----EKLQASVRCLAQGGRFLE 666 (1392)
Q Consensus 617 ~i~~s~~~~~~~~i~~~T~g~GvDvVld-----s~~~----~~l~~s~~~La~~Gr~v~ 666 (1392)
..+.....++ +..+ ..+|.|+. .++. ..++...++|+|+|+++.
T Consensus 102 ~~~~~~~~d~-----~~~~-~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i 154 (280)
T d2fk8a1 102 RSRQVLLQGW-----EDFA-EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTV 154 (280)
T ss_dssp SCEEEEESCG-----GGCC-CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred cchhhhhhhh-----hhhc-cchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEE
Confidence 1111111111 1123 35888864 2222 246778899999999985
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=93.19 E-value=0.062 Score=53.48 Aligned_cols=83 Identities=20% Similarity=0.193 Sum_probs=57.0
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
..++.+++|.|+ ||+|...+.++...|+++|+.++++..+. +..++.|+.-.+...|-. +.+.+..+...
T Consensus 26 vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~-------~~a~~~Ga~~~i~~~~~~--~~~~~~~~~~~ 95 (176)
T d2jhfa2 26 VTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKF-------AKAKEVGATECVNPQDYK--KPIQEVLTEMS 95 (176)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-------HHHHHTTCSEEECGGGCS--SCHHHHHHHHT
T ss_pred CCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHH-------HHHHHhCCeeEEecCCch--hHHHHHHHHHh
Confidence 467889999988 78999999999999998899999885332 223456766444333322 22344444432
Q ss_pred hcCCccEEEECccc
Q psy1119 858 KLGPVDGIFNLAVV 871 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv 871 (1392)
-+.+|.+|-+.|.
T Consensus 96 -~~G~D~vid~~G~ 108 (176)
T d2jhfa2 96 -NGGVDFSFEVIGR 108 (176)
T ss_dssp -TSCBSEEEECSCC
T ss_pred -cCCCCEEEecCCc
Confidence 2579999999884
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=93.19 E-value=0.062 Score=53.56 Aligned_cols=82 Identities=16% Similarity=0.136 Sum_probs=54.0
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
..++.+++|.|+ ||+|+..++++...|+++|+.++++.. ..+..++.|+...+ |..+.+..++ +.+..
T Consensus 25 ~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~-------r~~~a~~lGa~~~i---~~~~~~~~~~-v~~~t 92 (174)
T d1jqba2 25 IEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPI-------CVEAAKFYGATDIL---NYKNGHIEDQ-VMKLT 92 (174)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHH-------HHHHHHHHTCSEEE---CGGGSCHHHH-HHHHT
T ss_pred CCCCCEEEEEcC-Ccchhhhhhhhhcccccccccccchhh-------hHHHHHhhCccccc---cccchhHHHH-HHHHh
Confidence 356788999965 999999999999999988998888731 22333456765333 4433332333 22322
Q ss_pred hcCCccEEEECccc
Q psy1119 858 KLGPVDGIFNLAVV 871 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv 871 (1392)
.-..+|.+|.++|.
T Consensus 93 ~g~G~D~vid~~g~ 106 (174)
T d1jqba2 93 NGKGVDRVIMAGGG 106 (174)
T ss_dssp TTSCEEEEEECSSC
T ss_pred hccCcceEEEccCC
Confidence 22359999999984
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=93.13 E-value=0.061 Score=56.73 Aligned_cols=41 Identities=15% Similarity=0.262 Sum_probs=33.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHH
Q psy1119 568 SILIHAGSGGVGQAAINLARYMDAEIFTTVG-TPEKREFIRK 608 (1392)
Q Consensus 568 tVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~-s~ek~~~l~~ 608 (1392)
.|||.||++|+|.+..+.....|++|+.+++ ++++.+.+.+
T Consensus 3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~ 44 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSK 44 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH
Confidence 5899999999999999999999999988765 5555554443
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=93.05 E-value=0.069 Score=53.22 Aligned_cols=82 Identities=21% Similarity=0.248 Sum_probs=55.7
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCC-HHHHHHHHHHH
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITT-EAGVVNLLTEA 856 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~-~~~v~~l~~~~ 856 (1392)
+.++.+++|.| .||+|+..+.++-..||++|+.++++..+ .+..++.|+...+ |... .+.++...+..
T Consensus 26 v~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r-------~~~a~~~Ga~~~i---~~~~~~~~~~~~~~~~ 94 (174)
T d1e3ia2 26 VTPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEK-------FPKAKALGATDCL---NPRELDKPVQDVITEL 94 (174)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGG-------HHHHHHTTCSEEE---CGGGCSSCHHHHHHHH
T ss_pred CCCCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHH-------HHHHHHhCCCccc---CCccchhhhhhhHhhh
Confidence 46788999995 59999999999999999989998887533 2233456765443 2211 12233333333
Q ss_pred hhcCCccEEEECccc
Q psy1119 857 NKLGPVDGIFNLAVV 871 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv 871 (1392)
.-+.+|.+|.++|.
T Consensus 95 -~~~G~d~vie~~G~ 108 (174)
T d1e3ia2 95 -TAGGVDYSLDCAGT 108 (174)
T ss_dssp -HTSCBSEEEESSCC
T ss_pred -hcCCCcEEEEeccc
Confidence 23579999999984
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=93.03 E-value=0.19 Score=53.07 Aligned_cols=125 Identities=18% Similarity=0.174 Sum_probs=69.9
Q ss_pred cceEEcCCCCCHhhHhhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q psy1119 529 EMAWEIPDQWTLEDAATVPCVYATAVYAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRK 608 (1392)
Q Consensus 529 ~~~~~iPd~ls~e~AA~lp~~~~TA~~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~ 608 (1392)
.....+.++++|-...= |.. ..+..+|.. ..++|++||=.| ||. |..++.+++ .|++|+++..+++-.+.+++
T Consensus 88 ~~~i~i~pg~aFGTG~H-~TT-~l~l~~l~~--~~~~g~~VLDiG-cGs-G~l~i~aa~-~g~~V~gvDis~~av~~A~~ 160 (254)
T d2nxca1 88 EIPLVIEPGMAFGTGHH-ETT-RLALKALAR--HLRPGDKVLDLG-TGS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEA 160 (254)
T ss_dssp SEEEECCCC-----CCS-HHH-HHHHHHHHH--HCCTTCEEEEET-CTT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHH
T ss_pred ceEEEEccccccCcccc-chh-hHHHHHHHh--hcCccCEEEEcc-cch-hHHHHHHHh-cCCEEEEEECChHHHHHHHH
Confidence 44566666666533210 100 111233322 357999999774 343 666676554 79999999999987777765
Q ss_pred HCC--CCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCch----hHHHHHHhcccCCeEEEEEc
Q psy1119 609 TFP--FIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLAE----EKLQASVRCLAQGGRFLEIG 668 (1392)
Q Consensus 609 ~~p--~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~~----~~l~~s~~~La~~Gr~v~iG 668 (1392)
... ++. ..++.. +..+ ......+|+|+-.... +.++...++|+|||+++..|
T Consensus 161 na~~n~~~-~~~~~~---d~~~----~~~~~~fD~V~ani~~~~l~~l~~~~~~~LkpGG~lilSg 218 (254)
T d2nxca1 161 NAKRNGVR-PRFLEG---SLEA----ALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTG 218 (254)
T ss_dssp HHHHTTCC-CEEEES---CHHH----HGGGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHcCCc-eeEEec---cccc----cccccccchhhhccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 321 222 222322 2222 2233469999865432 34566778999999998644
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.98 E-value=0.065 Score=54.03 Aligned_cols=105 Identities=16% Similarity=0.165 Sum_probs=61.9
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
+.++||+||+||+|...++..-..|+++|+.++++. + . .....+..|+...+ |..+++ ..+.++++.. .
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~---e-~--~~~l~~~~gad~vi---~~~~~~-~~~~~~~~~~-~ 99 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQ---E-K--CLFLTSELGFDAAV---NYKTGN-VAEQLREACP-G 99 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSH---H-H--HHHHHHHSCCSEEE---ETTSSC-HHHHHHHHCT-T
T ss_pred CCEEEEECCCchhhHHHHHHHHHcCCcceecccchH---H-H--HhhhhhcccceEEe---eccchh-HHHHHHHHhc-c
Confidence 478999999999999999988788999777766652 1 1 12222355776544 444433 3333444422 3
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccc
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCG 922 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~ 922 (1392)
.+|.||.+.|- + .+.+.+. ...+.+.+|.+.++++.
T Consensus 100 GvDvv~D~vGg-----------~--------------~~~~~~~-~l~~~G~iv~~G~~s~~ 135 (187)
T d1vj1a2 100 GVDVYFDNVGG-----------D--------------ISNTVIS-QMNENSHIILCGQISQY 135 (187)
T ss_dssp CEEEEEESSCH-----------H--------------HHHHHHT-TEEEEEEEEEC------
T ss_pred CceEEEecCCc-----------h--------------hHHHHhh-hccccccEEEecccccc
Confidence 59999998862 1 1222222 22456899998877653
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=92.94 E-value=0.11 Score=53.83 Aligned_cols=100 Identities=14% Similarity=0.110 Sum_probs=65.2
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCc
Q psy1119 559 ICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRG 638 (1392)
Q Consensus 559 ~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~G 638 (1392)
....+++|++||-.|. |.|..+..+|+. +.+|+++..+++-.+.+++.+.....-.+...+... .. .....
T Consensus 64 ~~L~l~~g~~VLdIG~--GsGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~---g~---~~~~p 134 (224)
T d1vbfa_ 64 DELDLHKGQKVLEIGT--GIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTL---GY---EEEKP 134 (224)
T ss_dssp HHTTCCTTCEEEEECC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGG---CC---GGGCC
T ss_pred HHhhhcccceEEEecC--CCCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccCchhh---cc---hhhhh
Confidence 5568999999999854 346666667775 679999999988888887765433222222221111 00 11135
Q ss_pred ceEEEecCch-hHHHHHHhcccCCeEEEEE
Q psy1119 639 VDLVLNSLAE-EKLQASVRCLAQGGRFLEI 667 (1392)
Q Consensus 639 vDvVlds~~~-~~l~~s~~~La~~Gr~v~i 667 (1392)
+|+|+-+.+. +..+..++.|++|||+|..
T Consensus 135 fD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p 164 (224)
T d1vbfa_ 135 YDRVVVWATAPTLLCKPYEQLKEGGIMILP 164 (224)
T ss_dssp EEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred HHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence 8998765443 3445667999999999875
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=92.90 E-value=0.14 Score=54.21 Aligned_cols=47 Identities=15% Similarity=0.111 Sum_probs=37.4
Q ss_pred CCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhH-HHHHHH
Q psy1119 563 MQKGESILIHAGS--GGVGQAAINLARYMDAEIFTTVGTPEKR-EFIRKT 609 (1392)
Q Consensus 563 l~~GetVLI~ga~--GgVG~aaIqlA~~~Ga~V~~tv~s~ek~-~~l~~~ 609 (1392)
+-+|.++||.||+ .|+|.+..+-....||+|+.+..+.++. +.+.+.
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~ 52 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR 52 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHH
Confidence 4579999999965 4799999998899999999998877665 444453
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=92.59 E-value=0.11 Score=54.94 Aligned_cols=39 Identities=18% Similarity=0.325 Sum_probs=32.6
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecCh
Q psy1119 562 QMQKGESILIHAGSGGVGQAAINLARYMDAE-IFTTVGTP 600 (1392)
Q Consensus 562 ~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~-V~~tv~s~ 600 (1392)
..+|+.+|||.||+||+|++.+......|++ |+.+.++.
T Consensus 5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~ 44 (259)
T d2fr1a1 5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSG 44 (259)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSG
T ss_pred ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 4688999999999999999999988888995 55565554
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=92.58 E-value=0.053 Score=56.02 Aligned_cols=102 Identities=18% Similarity=0.230 Sum_probs=66.3
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCcee-eCCCccHHHHHHHHcCCC
Q psy1119 559 ICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIG-NSRDTSFEQLVMKRTKGR 637 (1392)
Q Consensus 559 ~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~-~s~~~~~~~~i~~~T~g~ 637 (1392)
....+++|++||..|+ |.|..++-+|+..|.+|+++...++-.+++++.+-.++.+++. -..|.. +. .....
T Consensus 72 ~~L~l~~g~~VLeIGs--GsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~--~g---~~~~~ 144 (215)
T d1jg1a_ 72 EIANLKPGMNILEVGT--GSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGS--KG---FPPKA 144 (215)
T ss_dssp HHHTCCTTCCEEEECC--TTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG--GC---CGGGC
T ss_pred HhhccCccceEEEecC--CCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccc--cC---CcccC
Confidence 4457999999999954 5677777888888988999988876666655443223434332 222211 00 11124
Q ss_pred cceEEEecCchh-HHHHHHhcccCCeEEEEE
Q psy1119 638 GVDLVLNSLAEE-KLQASVRCLAQGGRFLEI 667 (1392)
Q Consensus 638 GvDvVlds~~~~-~l~~s~~~La~~Gr~v~i 667 (1392)
.+|+|+-+.+-+ .-+..++.|++|||+|..
T Consensus 145 pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p 175 (215)
T d1jg1a_ 145 PYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP 175 (215)
T ss_dssp CEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred cceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence 689998755543 335667899999999874
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=92.49 E-value=0.17 Score=53.33 Aligned_cols=44 Identities=14% Similarity=0.141 Sum_probs=36.9
Q ss_pred CCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHH
Q psy1119 564 QKGESILIHAGSG--GVGQAAINLARYMDAEIFTTVGTPEKREFIR 607 (1392)
Q Consensus 564 ~~GetVLI~ga~G--gVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~ 607 (1392)
-+|.+|||.||+| |+|.+........|++|+.+.++++..+.+.
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~ 48 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVE 48 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHH
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4799999999998 8999999988999999999988766554443
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.43 E-value=0.17 Score=49.76 Aligned_cols=80 Identities=24% Similarity=0.091 Sum_probs=52.5
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
..++.+.+|.|+ |++|+..++++-..|++ ++.++++..+. +..++.|+...+...+-.+. .+.
T Consensus 25 ~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~-vi~~~~~~~k~-------~~a~~lGa~~~i~~~~~~~~------~~~-- 87 (168)
T d1piwa2 25 CGPGKKVGIVGL-GGIGSMGTLISKAMGAE-TYVISRSSRKR-------EDAMKMGADHYIATLEEGDW------GEK-- 87 (168)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHHTCE-EEEEESSSTTH-------HHHHHHTCSEEEEGGGTSCH------HHH--
T ss_pred cCCCCEEEEECC-CCcchhHHHHhhhcccc-ccccccchhHH-------HHhhccCCcEEeeccchHHH------HHh--
Confidence 457889999876 99999999998889997 66678775432 23345577644433332221 111
Q ss_pred hcCCccEEEECcccCCC
Q psy1119 858 KLGPVDGIFNLAVVLKD 874 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d 874 (1392)
..+..|.+|.+.+...+
T Consensus 88 ~~~~~d~vi~~~~~~~~ 104 (168)
T d1piwa2 88 YFDTFDLIVVCASSLTD 104 (168)
T ss_dssp SCSCEEEEEECCSCSTT
T ss_pred hhcccceEEEEecCCcc
Confidence 23478999998876443
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=92.25 E-value=0.17 Score=51.17 Aligned_cols=82 Identities=15% Similarity=0.098 Sum_probs=56.1
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
+.++.+++|.|+ |++|+..+.+....|+++|+.++++. .+++..++.|+...+ |-.+ +++.+-+.+..
T Consensus 23 v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~-------~rl~~a~~~Ga~~~~---~~~~-~~~~~~i~~~t 90 (195)
T d1kola2 23 VGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNP-------ARLAHAKAQGFEIAD---LSLD-TPLHEQIAALL 90 (195)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCH-------HHHHHHHHTTCEEEE---TTSS-SCHHHHHHHHH
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccc-------hhhHhhhhccccEEE---eCCC-cCHHHHHHHHh
Confidence 457889999965 99999999999899999899988873 223444667877543 2222 23333333333
Q ss_pred hcCCccEEEECccc
Q psy1119 858 KLGPVDGIFNLAVV 871 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv 871 (1392)
.-..+|.+|.+.|.
T Consensus 91 ~g~g~D~vid~vG~ 104 (195)
T d1kola2 91 GEPEVDCAVDAVGF 104 (195)
T ss_dssp SSSCEEEEEECCCT
T ss_pred CCCCcEEEEECccc
Confidence 33469999999884
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=92.24 E-value=0.079 Score=52.83 Aligned_cols=83 Identities=19% Similarity=0.185 Sum_probs=55.4
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
+.++.+++|.| .||+|+..++.+...|+++|+.++++..+. +..++.|+...+-.-|-.+. .+.+. +..
T Consensus 27 ~~~g~tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl-------~~Ak~~GA~~~in~~~~~~~--~~~~~-~~~ 95 (176)
T d1d1ta2 27 VKPGSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKDKF-------EKAMAVGATECISPKDSTKP--ISEVL-SEM 95 (176)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGH-------HHHHHHTCSEEECGGGCSSC--HHHHH-HHH
T ss_pred CCCCCEEEEEC-CCchhHHHHHHHHHcCCceEEEecCcHHHH-------HHHHhcCCcEEECccccchH--HHHHH-HHh
Confidence 56788999996 599999999999999998899999885432 22344577655533332221 12222 222
Q ss_pred hcCCccEEEECccc
Q psy1119 858 KLGPVDGIFNLAVV 871 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv 871 (1392)
.-..+|.+|.+.|.
T Consensus 96 ~g~G~d~vi~~~g~ 109 (176)
T d1d1ta2 96 TGNNVGYTFEVIGH 109 (176)
T ss_dssp HTSCCCEEEECSCC
T ss_pred ccccceEEEEeCCc
Confidence 23469999999874
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=92.18 E-value=0.074 Score=45.23 Aligned_cols=37 Identities=22% Similarity=0.310 Sum_probs=31.1
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCC
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSG 816 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~ 816 (1392)
.++.+++|+||+||.|....+.+...|++ |+.+++|.
T Consensus 30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~-Vi~~t~s~ 66 (77)
T d1o8ca2 30 PQDGEIVVTGASGGVGSTAVALLHKLGYQ-VVAVSGRE 66 (77)
T ss_dssp GGGCEEEESSTTSHHHHHHHHHHHHTTCC-EEEEESCG
T ss_pred cCCCcEEEEeCCCcHHHHHHHHHHHcCCe-EEEEECCH
Confidence 46789999999999999999988888997 66666664
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=92.15 E-value=0.11 Score=55.15 Aligned_cols=80 Identities=23% Similarity=0.367 Sum_probs=50.6
Q ss_pred ceeEeecCCCccccccHHHHhhcCC-ceEEEecCCCCCCCCHHHHHHHH---HHHHhhh-----ccCCCCcEEEEeechh
Q psy1119 1158 NTIFMVPGIEGIATVLEPLAKNINA-QVLVFQFDHTNPPDTIPEMADSL---LPHFKKR-----LVHGTDEIKLVGFSFG 1228 (1392)
Q Consensus 1158 ~pLF~vp~agG~~~~y~~La~~L~~-~~~v~~l~~e~~~~sieelA~~y---~~~I~~~-----q~qp~gPy~L~G~S~G 1228 (1392)
|-++++|+.+|....|..|+++|.. ...|+.++.......-...+... ++.+... .+ ......++|||+|
T Consensus 53 P~Vv~~HG~~g~~~~~~~~a~~lA~~Gy~V~~~d~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~v-D~~rI~v~G~S~G 131 (260)
T d1jfra_ 53 GAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPDSRGRQLLSALDYLTQRSSVRTRV-DATRLGVMGHSMG 131 (260)
T ss_dssp EEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCHHHHHHHHHHHHHHHHHTSTTGGGE-EEEEEEEEEETHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeeCCCcCCchhhHHHHHHHHHHHHhhhhhhccc-cccceEEEecccc
Confidence 3478999999999999999999975 46666665222222222222222 2222211 01 1234789999999
Q ss_pred HHHHHHHHHH
Q psy1119 1229 GMVALELAIK 1238 (1392)
Q Consensus 1229 g~VA~EmA~~ 1238 (1392)
|..|+..|.+
T Consensus 132 G~~al~aa~~ 141 (260)
T d1jfra_ 132 GGGSLEAAKS 141 (260)
T ss_dssp HHHHHHHHHH
T ss_pred chHHHHHHhh
Confidence 9999987764
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=92.10 E-value=0.1 Score=51.79 Aligned_cols=82 Identities=16% Similarity=0.141 Sum_probs=55.9
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHH-HHHHHHHHH
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEA-GVVNLLTEA 856 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~-~v~~l~~~~ 856 (1392)
..++.+++|.| .||+|+..++.+...|+++|+.++++..+ ++..++.|+...+ |.++.+ .+.+.....
T Consensus 25 ~~~G~~VlV~G-aGgvGl~a~~~ak~~G~~~Vi~~d~~~~k-------l~~a~~lGa~~~i---~~~~~d~~~~~~~~~~ 93 (174)
T d1p0fa2 25 VTPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTHKDK-------FPKAIELGATECL---NPKDYDKPIYEVICEK 93 (174)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGG-------HHHHHHTTCSEEE---CGGGCSSCHHHHHHHH
T ss_pred CCCCCEEEEEC-CCchhHHHHHHHHHcCCceeeccCChHHH-------HHHHHHcCCcEEE---cCCCchhHHHHHHHHh
Confidence 56788999997 59999999999999999999999887533 2333456876554 222222 123333332
Q ss_pred hhcCCccEEEECccc
Q psy1119 857 NKLGPVDGIFNLAVV 871 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv 871 (1392)
.-+.+|.+|-++|.
T Consensus 94 -~~~G~d~vid~~g~ 107 (174)
T d1p0fa2 94 -TNGGVDYAVECAGR 107 (174)
T ss_dssp -TTSCBSEEEECSCC
T ss_pred -cCCCCcEEEEcCCC
Confidence 22479999999874
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=91.93 E-value=0.21 Score=51.09 Aligned_cols=72 Identities=15% Similarity=0.132 Sum_probs=47.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEe
Q psy1119 567 ESILIHAGSGGVGQAAINLARYMDA--EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLN 644 (1392)
Q Consensus 567 etVLI~ga~GgVG~aaIqlA~~~Ga--~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVld 644 (1392)
-+|||.||+|.+|.+++..+...|. .|++.++++++...+.. .. .++..+-.+. +.+.+... ++|.|++
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-----~~-~~~~~d~~~~-~~~~~~~~--~~d~vi~ 74 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-----EA-DVFIGDITDA-DSINPAFQ--GIDALVI 74 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-----CT-TEEECCTTSH-HHHHHHHT--TCSEEEE
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-----Cc-EEEEeeeccc-cccccccc--cceeeEE
Confidence 4899999999999999999888885 57777888877654422 12 2322222222 23333333 6899998
Q ss_pred cCc
Q psy1119 645 SLA 647 (1392)
Q Consensus 645 s~~ 647 (1392)
+.+
T Consensus 75 ~a~ 77 (252)
T d2q46a1 75 LTS 77 (252)
T ss_dssp CCC
T ss_pred EEe
Confidence 754
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=91.89 E-value=0.16 Score=52.38 Aligned_cols=102 Identities=16% Similarity=0.165 Sum_probs=66.4
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCc--eeeCCCccHHHHHHHHc
Q psy1119 557 MFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEEN--IGNSRDTSFEQLVMKRT 634 (1392)
Q Consensus 557 L~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~--i~~s~~~~~~~~i~~~T 634 (1392)
+.+.++++++++||=.|+ |.|..+..+++ .|++|+++.-+++-.+.+++.....+..+ +......++ . .
T Consensus 7 ll~~~~l~~~~rVLDiGc--G~G~~~~~l~~-~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l-----~-~ 77 (231)
T d1vl5a_ 7 LMQIAALKGNEEVLDVAT--GGGHVANAFAP-FVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM-----P-F 77 (231)
T ss_dssp HHHHHTCCSCCEEEEETC--TTCHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC-----C-S
T ss_pred HHHhcCCCCcCEEEEecc--cCcHHHHHHHH-hCCEEEEEECCHHHHhhhhhcccccccccccccccccccc-----c-c
Confidence 446789999999998854 36777777775 48899999999877777655431122222 222211111 1 1
Q ss_pred CCCcceEEEecCc-------hhHHHHHHhcccCCeEEEEE
Q psy1119 635 KGRGVDLVLNSLA-------EEKLQASVRCLAQGGRFLEI 667 (1392)
Q Consensus 635 ~g~GvDvVlds~~-------~~~l~~s~~~La~~Gr~v~i 667 (1392)
....+|+|+-... ...+....++|+|||+++..
T Consensus 78 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 117 (231)
T d1vl5a_ 78 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLV 117 (231)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEE
Confidence 2346999986432 23578899999999999864
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=91.64 E-value=0.11 Score=55.09 Aligned_cols=44 Identities=16% Similarity=0.221 Sum_probs=36.4
Q ss_pred CCCEEEEEcCCchHHHHHHH-HHH--HcCCEEEEEecChhhHHHHHH
Q psy1119 565 KGESILIHAGSGGVGQAAIN-LAR--YMDAEIFTTVGTPEKREFIRK 608 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIq-lA~--~~Ga~V~~tv~s~ek~~~l~~ 608 (1392)
.|..++|.||++|+|.+..+ +|+ ..|++|+.+.+++++.+.+.+
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~ 51 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKE 51 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHH
Confidence 57889999999999998765 666 379999999999888776654
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=91.60 E-value=0.37 Score=47.83 Aligned_cols=96 Identities=14% Similarity=-0.015 Sum_probs=64.3
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcC--------------ce--eeCCCcc
Q psy1119 562 QMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEE--------------NI--GNSRDTS 625 (1392)
Q Consensus 562 ~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~--------------~i--~~s~~~~ 625 (1392)
.+.||.+||..|. |.|..++.+|+ .|++|++++-|++-.+.+++..+..+.. .+ .+..+..
T Consensus 17 ~~~~~~rvLd~GC--G~G~~a~~la~-~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 93 (201)
T d1pjza_ 17 NVVPGARVLVPLC--GKSQDMSWLSG-QGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT 93 (201)
T ss_dssp CCCTTCEEEETTT--CCSHHHHHHHH-HCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred CCCCCCEEEEecC--cCCHHHHHHHH-cCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccc
Confidence 6899999999844 56788999987 5999999999999888888764322210 00 0111111
Q ss_pred HHHHHHHHcCCCcceEEEecCc-----h----hHHHHHHhcccCCeEEEEE
Q psy1119 626 FEQLVMKRTKGRGVDLVLNSLA-----E----EKLQASVRCLAQGGRFLEI 667 (1392)
Q Consensus 626 ~~~~i~~~T~g~GvDvVlds~~-----~----~~l~~s~~~La~~Gr~v~i 667 (1392)
... ...+|+|+++.. . ..++...++|+++|+++..
T Consensus 94 ~~~-------~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~ 137 (201)
T d1pjza_ 94 ARD-------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI 137 (201)
T ss_dssp HHH-------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred ccc-------ccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEE
Confidence 111 125899988433 1 2456778899999998754
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=91.58 E-value=0.64 Score=48.47 Aligned_cols=44 Identities=16% Similarity=0.276 Sum_probs=30.4
Q ss_pred CcccceEEEEeeCCCC-CCChhhcCccc-c--cCCCeEEEEEcc-Cccc
Q psy1119 1313 KAFGGNITLLRPTEQA-LPTAEDYGLSK-V--CKKPVKVHFVDG-NHFT 1356 (1392)
Q Consensus 1313 ~~~~~pi~l~~a~~~~-~~~~~~~~W~~-~--~~g~v~v~~v~G-~H~~ 1356 (1392)
.++.+|++++.++.|. +.......+.+ + ...+++++.+|| +|-+
T Consensus 189 ~~~~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 237 (260)
T d2hu7a2 189 DRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAI 237 (260)
T ss_dssp GGCCSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEETTCCSSC
T ss_pred cccCCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEECcCCCCC
Confidence 3678899999999987 55444443332 2 235688999998 8854
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=91.27 E-value=0.15 Score=50.42 Aligned_cols=82 Identities=16% Similarity=0.222 Sum_probs=55.1
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHH-HHHHHHHH
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAG-VVNLLTEA 856 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~-v~~l~~~~ 856 (1392)
..++.+++|.| .||+|...+..++..|+++|+.++++..+ .+..++.|+.-.+ |..+.+. +++..+..
T Consensus 26 ~k~g~~VlI~G-~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~r-------l~~a~~~GAd~~i---n~~~~~~~~~~~~~~~ 94 (175)
T d1cdoa2 26 VEPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDK-------FEKAKVFGATDFV---NPNDHSEPISQVLSKM 94 (175)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGG-------HHHHHHTTCCEEE---CGGGCSSCHHHHHHHH
T ss_pred CCCCCEEEEEe-cCCccchHHHHHHHHhhchheeecchHHH-------HHHHHHcCCcEEE---cCCCcchhHHHHHHhh
Confidence 46788999996 48899999999999999999999887532 2334567876544 3222222 22222222
Q ss_pred hhcCCccEEEECccc
Q psy1119 857 NKLGPVDGIFNLAVV 871 (1392)
Q Consensus 857 ~~~g~I~gvi~~Agv 871 (1392)
.-+.+|.+|-+.|.
T Consensus 95 -~~~G~d~vid~~G~ 108 (175)
T d1cdoa2 95 -TNGGVDFSLECVGN 108 (175)
T ss_dssp -HTSCBSEEEECSCC
T ss_pred -ccCCcceeeeecCC
Confidence 23479999999984
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=91.24 E-value=0.084 Score=56.80 Aligned_cols=102 Identities=17% Similarity=0.133 Sum_probs=68.4
Q ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCC--CCCcC-cee--eCCCccHHHHH
Q psy1119 556 AMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFP--FIKEE-NIG--NSRDTSFEQLV 630 (1392)
Q Consensus 556 aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p--~l~~~-~i~--~s~~~~~~~~i 630 (1392)
.|...+.+.+|.+||=.|. |.|..+..+|+..|++|+++.-++...+.+++... ++... .+. |..+..
T Consensus 58 ~l~~~~~l~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~----- 130 (282)
T d2o57a1 58 ELAMTGVLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP----- 130 (282)
T ss_dssp HHHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-----
T ss_pred HHHHhcCCCCCCEEEEeCC--CCcHHHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccccc-----
Confidence 3556678999999998743 46778888999889999999999887776665321 12211 122 111111
Q ss_pred HHHcCCCcceEEEecCc-------hhHHHHHHhcccCCeEEEEE
Q psy1119 631 MKRTKGRGVDLVLNSLA-------EEKLQASVRCLAQGGRFLEI 667 (1392)
Q Consensus 631 ~~~T~g~GvDvVlds~~-------~~~l~~s~~~La~~Gr~v~i 667 (1392)
.+...+|+|+-.-. ...+....++|+|||+++..
T Consensus 131 ---~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~ 171 (282)
T d2o57a1 131 ---CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAIT 171 (282)
T ss_dssp ---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---ccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEE
Confidence 12346999975321 23678889999999998865
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=90.90 E-value=0.17 Score=50.05 Aligned_cols=83 Identities=20% Similarity=0.197 Sum_probs=55.1
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
+.++.+++|.|+ ||+|...++.+...|+++|+.++++..+. +..++.|+.-.+..-+ +.+.+.+.++...
T Consensus 26 ~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~-------~~ak~lGa~~~i~~~~--~~~~~~~~~~~~~ 95 (176)
T d2fzwa2 26 LEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF-------ARAKEFGATECINPQD--FSKPIQEVLIEMT 95 (176)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-------HHHHHHTCSEEECGGG--CSSCHHHHHHHHT
T ss_pred CCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHH-------HHHHHhCCcEEEeCCc--hhhHHHHHHHHHc
Confidence 467889999987 79999999999999999888888774322 2233457654432222 1233444444432
Q ss_pred hcCCccEEEECccc
Q psy1119 858 KLGPVDGIFNLAVV 871 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv 871 (1392)
-+.+|.+|.+.|.
T Consensus 96 -~~g~D~vid~~G~ 108 (176)
T d2fzwa2 96 -DGGVDYSFECIGN 108 (176)
T ss_dssp -TSCBSEEEECSCC
T ss_pred -CCCCcEeeecCCC
Confidence 2479999999883
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=90.87 E-value=0.15 Score=56.20 Aligned_cols=47 Identities=15% Similarity=0.183 Sum_probs=41.3
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q psy1119 562 QMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRK 608 (1392)
Q Consensus 562 ~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~ 608 (1392)
-+++|.+|||.||+|=||...+......|.+|++++++.++...+.+
T Consensus 7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~ 53 (342)
T d1y1pa1 7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQK 53 (342)
T ss_dssp SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHH
Confidence 46789999999999999999999888889999999998877766654
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=90.72 E-value=0.084 Score=52.67 Aligned_cols=106 Identities=8% Similarity=0.052 Sum_probs=64.2
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
++.++||+||+||.|....+.....|++ ++.++++..+ .+.++..|+...+.. .+ . ..+.+... .-
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~-Viat~~s~~k-------~~~~~~lGa~~vi~~---~~-~-~~~~~~~~-~~ 96 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRGYT-VEASTGKAAE-------HDYLRVLGAKEVLAR---ED-V-MAERIRPL-DK 96 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCC-EEEEESCTTC-------HHHHHHTTCSEEEEC---C-----------C-CS
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcCCc-eEEecCchHH-------HHHHHhcccceeeec---ch-h-HHHHHHHh-hc
Confidence 4678999999999999999998889998 5556665432 223345687765532 11 1 12222222 22
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecccccccCC
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGRGN 925 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~G~ 925 (1392)
+.+|.||.+.|-. .|. +... .+.+.+.||.+++.++....
T Consensus 97 ~gvD~vid~vgg~-----------~~~--------------~~l~-~l~~~Griv~~G~~~g~~~~ 136 (176)
T d1xa0a2 97 QRWAAAVDPVGGR-----------TLA--------------TVLS-RMRYGGAVAVSGLTGGAEVP 136 (176)
T ss_dssp CCEEEEEECSTTT-----------THH--------------HHHH-TEEEEEEEEECSCCSSSCCC
T ss_pred cCcCEEEEcCCch-----------hHH--------------HHHH-HhCCCceEEEeecccCcccC
Confidence 4799999998731 111 1111 22456899999987665543
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=90.65 E-value=0.097 Score=57.49 Aligned_cols=100 Identities=17% Similarity=0.241 Sum_probs=60.8
Q ss_pred CCCceeEeecCCCcccc--ccHHHHhhc-C-CceEEEecCC----CCCC----CCHHHHHHH---HHHHHhhhccCCCCc
Q psy1119 1155 GNNNTIFMVPGIEGIAT--VLEPLAKNI-N-AQVLVFQFDH----TNPP----DTIPEMADS---LLPHFKKRLVHGTDE 1219 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~~--~y~~La~~L-~-~~~~v~~l~~----e~~~----~sieelA~~---y~~~I~~~q~qp~gP 1219 (1392)
.+++..|++|+-.++.. ....+...+ . .+..|+.++- .... ..+..+++. +++.+....-.+...
T Consensus 68 ~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~ 147 (337)
T d1rp1a2 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQ 147 (337)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeeccccCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh
Confidence 44577899999877663 344454443 3 5688888861 1111 123333333 333322111113356
Q ss_pred EEEEeechhHHHHHHHHHHHHHcCCccEEEEEeCCCCC
Q psy1119 1220 IKLVGFSFGGMVALELAIKLEQLGTKCHLYLVDSAPDY 1257 (1392)
Q Consensus 1220 y~L~G~S~Gg~VA~EmA~~Le~~G~~v~LvLiD~~p~~ 1257 (1392)
.+|+|||+||.||=.+++++.+ -.++..+|.+-|.
T Consensus 148 vhlIGhSLGAhvAG~aG~~~~~---l~rItgLDPA~P~ 182 (337)
T d1rp1a2 148 VQLIGHSLGAHVAGEAGSRTPG---LGRITGLDPVEAS 182 (337)
T ss_dssp EEEEEETHHHHHHHHHHHTSTT---CCEEEEESCCCTT
T ss_pred eEEEeecHHHhhhHHHHHhhcc---ccceeccCCCccc
Confidence 9999999999999999998852 2378899987654
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=90.47 E-value=0.22 Score=51.58 Aligned_cols=102 Identities=19% Similarity=0.239 Sum_probs=66.3
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCC--CCCcCceeeCCCccHHHHHHHHc
Q psy1119 557 MFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFP--FIKEENIGNSRDTSFEQLVMKRT 634 (1392)
Q Consensus 557 L~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p--~l~~~~i~~s~~~~~~~~i~~~T 634 (1392)
+...+.+++|++||=.|. |.|..+..+|+ .|++|++++-|++-.+.+++... ++....+...+..++ . .
T Consensus 8 l~~~~~~~~~~rILDiGc--GtG~~~~~la~-~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~-----~-~ 78 (234)
T d1xxla_ 8 MIKTAECRAEHRVLDIGA--GAGHTALAFSP-YVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL-----P-F 78 (234)
T ss_dssp HHHHHTCCTTCEEEEESC--TTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC-----C-S
T ss_pred HHHHhCCCCCCEEEEeCC--cCcHHHHHHHH-hCCeEEEEeCChhhhhhhhhhhcccccccccccccccccc-----c-c
Confidence 557789999999998854 45777778877 47899999999877766655421 121111221111110 0 1
Q ss_pred CCCcceEEEecCc-------hhHHHHHHhcccCCeEEEEE
Q psy1119 635 KGRGVDLVLNSLA-------EEKLQASVRCLAQGGRFLEI 667 (1392)
Q Consensus 635 ~g~GvDvVlds~~-------~~~l~~s~~~La~~Gr~v~i 667 (1392)
+...+|+|+-+.. ...+....++|+|+|+++..
T Consensus 79 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~ 118 (234)
T d1xxla_ 79 PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLV 118 (234)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEE
Confidence 2346999986432 23578889999999998864
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=90.42 E-value=0.13 Score=56.93 Aligned_cols=38 Identities=16% Similarity=0.103 Sum_probs=34.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEK 602 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek 602 (1392)
+|.+|||.||+|-||..+++.+...|.+|++++++..+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~ 44 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPT 44 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 57999999999999999999999999999999986543
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=90.32 E-value=0.33 Score=47.54 Aligned_cols=76 Identities=20% Similarity=0.173 Sum_probs=50.6
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
..++.+++|.|+ ||+|+..++++-..|++.++ ++++..+. +..++.|+... .|..+.+... .
T Consensus 28 ~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~-~~~~~~~~-------~~a~~lGad~~---i~~~~~~~~~------~ 89 (168)
T d1uufa2 28 AGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVA-FTTSEAKR-------EAAKALGADEV---VNSRNADEMA------A 89 (168)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEE-EESSGGGH-------HHHHHHTCSEE---EETTCHHHHH------T
T ss_pred CCCCCEEEEecc-chHHHHHHHHhhcccccchh-hccchhHH-------HHHhccCCcEE---EECchhhHHH------H
Confidence 457889999975 99999999999999998654 55553221 12234476543 3555544322 2
Q ss_pred hcCCccEEEECccc
Q psy1119 858 KLGPVDGIFNLAVV 871 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv 871 (1392)
....+|.+|.+.|.
T Consensus 90 ~~~~~D~vid~~g~ 103 (168)
T d1uufa2 90 HLKSFDFILNTVAA 103 (168)
T ss_dssp TTTCEEEEEECCSS
T ss_pred hcCCCceeeeeeec
Confidence 23579999999884
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=90.29 E-value=0.33 Score=48.46 Aligned_cols=99 Identities=16% Similarity=0.176 Sum_probs=62.8
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCc-Cc--eeeCCCccHHHHHHHHcCC
Q psy1119 560 CGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKE-EN--IGNSRDTSFEQLVMKRTKG 636 (1392)
Q Consensus 560 ~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~-~~--i~~s~~~~~~~~i~~~T~g 636 (1392)
..++++|++||=.|. |.|..++.+|+. +++|+++..+++..+.+++.....+. ++ ++.. +..+.. ...
T Consensus 28 ~l~~~~g~~VLDiGc--GsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~g---da~~~~---~~~ 98 (186)
T d1l3ia_ 28 LAEPGKNDVAVDVGC--GTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG---DAPEAL---CKI 98 (186)
T ss_dssp HHCCCTTCEEEEESC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES---CHHHHH---TTS
T ss_pred hcCCCCCCEEEEEEC--CeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEEC---chhhcc---ccc
Confidence 347899999996643 334555666664 67999999998888877764322222 12 2222 222222 334
Q ss_pred CcceEEEecCc----hhHHHHHHhcccCCeEEEEE
Q psy1119 637 RGVDLVLNSLA----EEKLQASVRCLAQGGRFLEI 667 (1392)
Q Consensus 637 ~GvDvVlds~~----~~~l~~s~~~La~~Gr~v~i 667 (1392)
..+|.|+-... .+.++...+.|+|+|+++..
T Consensus 99 ~~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 133 (186)
T d1l3ia_ 99 PDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVT 133 (186)
T ss_dssp CCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCcCEEEEeCccccchHHHHHHHHHhCcCCEEEEE
Confidence 57898875443 24678888999999998743
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=90.18 E-value=0.33 Score=47.48 Aligned_cols=64 Identities=17% Similarity=0.114 Sum_probs=44.4
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHH
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLL 853 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~ 853 (1392)
.|.++|.|+ |.+|..+|+.|+++|.. |++..|+... .+.+.+..........+..+.......+
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~-V~v~dr~~~~-------a~~l~~~~~~~~~~~~~~~~~~~~~~~i 65 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIK-VTVACRTLES-------AKKLSAGVQHSTPISLDVNDDAALDAEV 65 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCE-EEEEESCHHH-------HHHHHTTCTTEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCE-EEEEECChHH-------HHHHHhcccccccccccccchhhhHhhh
Confidence 578888865 99999999999999996 9999998421 2223333333455556777766665544
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=90.10 E-value=0.24 Score=52.17 Aligned_cols=36 Identities=11% Similarity=0.147 Sum_probs=32.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q psy1119 568 SILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKR 603 (1392)
Q Consensus 568 tVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~ 603 (1392)
+.||.||++|+|.+...-....|++|+.+.++.++.
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~ 38 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGA 38 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH
Confidence 469999999999999999999999999999876553
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.08 E-value=0.16 Score=55.58 Aligned_cols=101 Identities=20% Similarity=0.228 Sum_probs=61.5
Q ss_pred CCCceeEeecCCCccc--cccHHHHhhc-C-CceEEEecC----CCCCC----CCHHHHH---HHHHHHHhhhccCCCCc
Q psy1119 1155 GNNNTIFMVPGIEGIA--TVLEPLAKNI-N-AQVLVFQFD----HTNPP----DTIPEMA---DSLLPHFKKRLVHGTDE 1219 (1392)
Q Consensus 1155 g~~~pLF~vp~agG~~--~~y~~La~~L-~-~~~~v~~l~----~e~~~----~sieelA---~~y~~~I~~~q~qp~gP 1219 (1392)
.+++..|++|+-.++. .....+...+ . .+..|+.++ ...+. ..+..++ +.+++.+....-.+..-
T Consensus 68 ~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~ 147 (338)
T d1bu8a2 68 LDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPEN 147 (338)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhcccchHHHHHhHHHHHHHHHHHHHHHHHhcCCCcce
Confidence 3456789999976655 3344454443 2 568888886 11110 1233333 33444332221123356
Q ss_pred EEEEeechhHHHHHHHHHHHHHcCCccEEEEEeCCCCC
Q psy1119 1220 IKLVGFSFGGMVALELAIKLEQLGTKCHLYLVDSAPDY 1257 (1392)
Q Consensus 1220 y~L~G~S~Gg~VA~EmA~~Le~~G~~v~LvLiD~~p~~ 1257 (1392)
++|+|||+||.||=..+++|. |.-.++.-+|.+-|.
T Consensus 148 vhlIGhSLGAhiaG~ag~~l~--~kigrItgLDPA~P~ 183 (338)
T d1bu8a2 148 VHLIGHSLGAHVVGEAGRRLE--GHVGRITGLDPAEPC 183 (338)
T ss_dssp EEEEEETHHHHHHHHHHHHTT--TCSSEEEEESCBCTT
T ss_pred eEEEeccHHHHHHHHHHHhhc--cccccccccccCcCc
Confidence 999999999999999999995 333388899986553
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=89.59 E-value=0.36 Score=51.81 Aligned_cols=38 Identities=24% Similarity=0.260 Sum_probs=33.3
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecChhh
Q psy1119 565 KGESILIHAGSG--GVGQAAINLARYMDAEIFTTVGTPEK 602 (1392)
Q Consensus 565 ~GetVLI~ga~G--gVG~aaIqlA~~~Ga~V~~tv~s~ek 602 (1392)
+|.++||.||+| |+|.+..+-....||+|+.+.++++.
T Consensus 7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~ 46 (297)
T d1d7oa_ 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL 46 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence 689999999877 99999999999999999988876543
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=89.40 E-value=0.81 Score=44.46 Aligned_cols=96 Identities=10% Similarity=0.060 Sum_probs=63.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEec
Q psy1119 566 GESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNS 645 (1392)
Q Consensus 566 GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds 645 (1392)
+.+|||.|| |.+|..+++.....|.+|++..++.++.+.+.+.++ ...+......... ...... ...|+++.+
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~---~~~~~~~~~~~~~-~~~~~i--~~~~~~i~~ 74 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ---HSTPISLDVNDDA-ALDAEV--AKHDLVISL 74 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCT---TEEEEECCTTCHH-HHHHHH--TTSSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhccc---ccccccccccchh-hhHhhh--hccceeEee
Confidence 678999965 999999999888889999999999999999988653 2222222211111 111111 246788877
Q ss_pred Cchh-HHHHHHhcccCCeEEEEEc
Q psy1119 646 LAEE-KLQASVRCLAQGGRFLEIG 668 (1392)
Q Consensus 646 ~~~~-~l~~s~~~La~~Gr~v~iG 668 (1392)
.... .......|+..+..++.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~ 98 (182)
T d1e5qa1 75 IPYTFHATVIKSAIRQKKHVVTTS 98 (182)
T ss_dssp SCGGGHHHHHHHHHHHTCEEECSS
T ss_pred ccchhhhHHHHHHHhhccceeecc
Confidence 6543 3444456667777777654
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=89.22 E-value=0.31 Score=51.52 Aligned_cols=39 Identities=21% Similarity=0.256 Sum_probs=33.5
Q ss_pred CCCcEEEEeechhHHHHHHHHHHHHHcCCccEEEEEeCC
Q psy1119 1216 GTDEIKLVGFSFGGMVALELAIKLEQLGTKCHLYLVDSA 1254 (1392)
Q Consensus 1216 p~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v~LvLiD~~ 1254 (1392)
|..+..+.|||+||.+|.-+|..|...+..+.++-..++
T Consensus 123 ~~~~i~vTGHSLGGAlA~L~a~~l~~~~~~~~~~tFG~P 161 (261)
T d1uwca_ 123 PDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEP 161 (261)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHHHHTTCSSEEEEEESCC
T ss_pred CCcceEEeccchhHHHHHHHHHHHHhcCCCcceEEecCc
Confidence 677899999999999999999999999887777666554
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=89.22 E-value=0.42 Score=51.63 Aligned_cols=87 Identities=21% Similarity=0.260 Sum_probs=53.2
Q ss_pred eeEeecCCC---ccccccHHHHhhcC--CceEEEecC-----CCCCCCCHHHHHHHHHH---HHhhhccCCCCcEEEEee
Q psy1119 1159 TIFMVPGIE---GIATVLEPLAKNIN--AQVLVFQFD-----HTNPPDTIPEMADSLLP---HFKKRLVHGTDEIKLVGF 1225 (1392)
Q Consensus 1159 pLF~vp~ag---G~~~~y~~La~~L~--~~~~v~~l~-----~e~~~~sieelA~~y~~---~I~~~q~qp~gPy~L~G~ 1225 (1392)
-|+.||++| |+...+..++.++- ..+.|+.++ +...+.-+++..+.+.- ...+..+.| ....|+|+
T Consensus 80 vvv~iHGGG~~~g~~~~~~~~~~~la~~~G~~V~~vdYrl~pe~~~~~~~~d~~~~~~~~~~~~~~~g~D~-~rI~l~G~ 158 (317)
T d1lzla_ 80 VLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYAALLYIHAHAEELGIDP-SRIAVGGQ 158 (317)
T ss_dssp EEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEE-EEEEEEEE
T ss_pred EEEEecCcccccccccccchHHHhHHhhcCCccccccccccccccccccccccccchhHHHHHHHHhCCCH-HHEEEEEe
Confidence 377889864 56677777776663 256666665 22223334444433321 111110111 24889999
Q ss_pred chhHHHHHHHHHHHHHcCCcc
Q psy1119 1226 SFGGMVALELAIKLEQLGTKC 1246 (1392)
Q Consensus 1226 S~Gg~VA~EmA~~Le~~G~~v 1246 (1392)
|.||.+|.-++.++...|...
T Consensus 159 SaGg~la~~~~~~~~~~~~~~ 179 (317)
T d1lzla_ 159 SAGGGLAAGTVLKARDEGVVP 179 (317)
T ss_dssp THHHHHHHHHHHHHHHHCSSC
T ss_pred ccccHHHHHHHhhhhhccccc
Confidence 999999999999998887654
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.77 E-value=0.26 Score=52.94 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=26.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEE---EEecChh
Q psy1119 568 SILIHAGSGGVGQAAINLARYMDAEIF---TTVGTPE 601 (1392)
Q Consensus 568 tVLI~ga~GgVG~aaIqlA~~~Ga~V~---~tv~s~e 601 (1392)
.|||.||++|+|.+........|++|+ .+.++.+
T Consensus 4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~ 40 (285)
T d1jtva_ 4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLK 40 (285)
T ss_dssp EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGG
T ss_pred EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChh
Confidence 468999999999999988888999754 4444433
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=88.76 E-value=0.59 Score=48.52 Aligned_cols=101 Identities=16% Similarity=0.124 Sum_probs=65.4
Q ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcC-ceeeCCCccHHHHHHHHc
Q psy1119 556 AMFICGQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEE-NIGNSRDTSFEQLVMKRT 634 (1392)
Q Consensus 556 aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~-~i~~s~~~~~~~~i~~~T 634 (1392)
.+.......++.+||=. |||. |..++.+++ .|++|+++.-|++-.+.+++.++..+.. .+....-. ...
T Consensus 32 ~~~~~~~~~~~~~iLDi-GcGt-G~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~-------~l~ 101 (251)
T d1wzna1 32 EIFKEDAKREVRRVLDL-ACGT-GIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVL-------EIA 101 (251)
T ss_dssp HHHHHTCSSCCCEEEEE-TCTT-CHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGG-------GCC
T ss_pred HHHHHhcCCCCCEEEEe-CCCC-Cccchhhcc-cceEEEEEeeccccccccccccccccccchheehhhh-------hcc
Confidence 44455566778899988 4454 788888887 6899999999988777777654322211 22222111 112
Q ss_pred CCCcceEEEecCc-------h---hHHHHHHhcccCCeEEEE
Q psy1119 635 KGRGVDLVLNSLA-------E---EKLQASVRCLAQGGRFLE 666 (1392)
Q Consensus 635 ~g~GvDvVlds~~-------~---~~l~~s~~~La~~Gr~v~ 666 (1392)
....+|+|+-+.+ . ..++...++|+|+|+++.
T Consensus 102 ~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii 143 (251)
T d1wzna1 102 FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (251)
T ss_dssp CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence 2347999886421 1 257778899999999875
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=88.73 E-value=0.26 Score=52.62 Aligned_cols=39 Identities=5% Similarity=0.046 Sum_probs=31.2
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHH
Q psy1119 569 ILIHAGSGGVGQAAINLARYMDAEIFTTVGT-PEKREFIR 607 (1392)
Q Consensus 569 VLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s-~ek~~~l~ 607 (1392)
+||.||++|+|.+..+-....|++|+.+.++ +++.+.+.
T Consensus 5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~ 44 (284)
T d1e7wa_ 5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS 44 (284)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHH
Confidence 6899999999999999988999999987764 44444433
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=88.66 E-value=0.31 Score=51.85 Aligned_cols=39 Identities=21% Similarity=0.330 Sum_probs=33.4
Q ss_pred CCCCcEEEEeechhHHHHHHHHHHHHHcCCccEEEEEeC
Q psy1119 1215 HGTDEIKLVGFSFGGMVALELAIKLEQLGTKCHLYLVDS 1253 (1392)
Q Consensus 1215 qp~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v~LvLiD~ 1253 (1392)
.|..+..+.|||+||.+|.-+|..|...+.++.++-..+
T Consensus 135 ~~~~~i~vtGHSLGGalA~l~a~~l~~~~~~i~~~tFG~ 173 (269)
T d1tiba_ 135 HPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGA 173 (269)
T ss_dssp CTTSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESC
T ss_pred CCCcceeeeccchHHHHHHHHHHHHHhccCcceEEEecC
Confidence 367789999999999999999999999888887766644
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.57 E-value=0.24 Score=51.33 Aligned_cols=98 Identities=18% Similarity=0.091 Sum_probs=63.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEE
Q psy1119 564 QKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVL 643 (1392)
Q Consensus 564 ~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVl 643 (1392)
.+|.+||=.|. |.|..+..+|+..+++|+++.-+++-.+.+++.+...+....+- ..+.. .+........+|.|+
T Consensus 52 ~~g~~VLdIGc--G~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~fD~i~ 126 (229)
T d1zx0a1 52 SKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPL--KGLWE-DVAPTLPDGHFDGIL 126 (229)
T ss_dssp TTCEEEEEECC--TTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEE--ESCHH-HHGGGSCTTCEEEEE
T ss_pred cCCCeEEEeec--cchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccc--ccccc-cccccccccccccee
Confidence 67999999843 56788899998877899999999988888887653222211111 11222 222223344688874
Q ss_pred -ecCc-----------hhHHHHHHhcccCCeEEEE
Q psy1119 644 -NSLA-----------EEKLQASVRCLAQGGRFLE 666 (1392)
Q Consensus 644 -ds~~-----------~~~l~~s~~~La~~Gr~v~ 666 (1392)
|... ...+....+.|+|||+|+.
T Consensus 127 fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~ 161 (229)
T d1zx0a1 127 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTY 161 (229)
T ss_dssp ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred ecccccccccccccCHHHHHHHHHHHcCCCcEEEE
Confidence 5331 1145667789999999975
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.69 E-value=0.87 Score=46.74 Aligned_cols=105 Identities=10% Similarity=-0.054 Sum_probs=66.2
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCc---------CceeeCCC--ccH-HH
Q psy1119 561 GQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKE---------ENIGNSRD--TSF-EQ 628 (1392)
Q Consensus 561 a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~---------~~i~~s~~--~~~-~~ 628 (1392)
..+.+|.+||.. ||| .|..+..+|+ .|++|+++..|++-.+.+++..+..+. ........ .+| ..
T Consensus 41 l~~~~~~rvLd~-GCG-~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 117 (229)
T d2bzga1 41 LKGKSGLRVFFP-LCG-KAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCC 117 (229)
T ss_dssp HTTCCSCEEEET-TCT-TCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES
T ss_pred cCCCCCCEEEEe-CCC-CcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEc
Confidence 357889999998 544 4899999987 699999999999888888776532211 11111000 000 00
Q ss_pred HHHHH--cCCCcceEEEecCc-----h----hHHHHHHhcccCCeEEEEEc
Q psy1119 629 LVMKR--TKGRGVDLVLNSLA-----E----EKLQASVRCLAQGGRFLEIG 668 (1392)
Q Consensus 629 ~i~~~--T~g~GvDvVlds~~-----~----~~l~~s~~~La~~Gr~v~iG 668 (1392)
.+... .....+|+|+++.. . ..+....++|+|+|+++.+.
T Consensus 118 d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~ 168 (229)
T d2bzga1 118 SIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCV 168 (229)
T ss_dssp CGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred chhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEE
Confidence 01111 22346899998542 1 24567889999999987654
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=87.60 E-value=0.2 Score=47.01 Aligned_cols=93 Identities=17% Similarity=0.122 Sum_probs=61.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecCc
Q psy1119 568 SILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSLA 647 (1392)
Q Consensus 568 tVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~~ 647 (1392)
+|.|+|++|-+|++..+++...|.+++....... ... . ..+|||+|...
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~--------------~~~---------------~--~~~DVvIDFS~ 50 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG--------------VEE---------------L--DSPDVVIDFSS 50 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE--------------EEE---------------C--SCCSEEEECSC
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc--------------HHH---------------h--ccCCEEEEecC
Confidence 5899999999999999999999998876553210 000 0 25799999988
Q ss_pred hhHHHHHHhcccCCeEEEEEcccccccCccccccccCCCcEEEE
Q psy1119 648 EEKLQASVRCLAQGGRFLEIGKFDLANNNMLGMEVFMRETSFHG 691 (1392)
Q Consensus 648 ~~~l~~s~~~La~~Gr~v~iG~~~~~~~~~l~~~~~~k~~s~~g 691 (1392)
.+.....++.+...|.-+.+|.........-...-..+.+.+..
T Consensus 51 p~~~~~~l~~~~~~~~p~ViGTTG~~~~~~~~i~~~ak~~pv~~ 94 (128)
T d1vm6a3 51 PEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELSKEVPVVQ 94 (128)
T ss_dssp GGGHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHTTTSEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHhhCCEEe
Confidence 88777777766666666778876544322222233345554433
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=87.37 E-value=0.95 Score=47.63 Aligned_cols=102 Identities=23% Similarity=0.290 Sum_probs=68.2
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHCCC---CCcCce-eeCCCccHHHHHHH
Q psy1119 559 ICGQMQKGESILIHAGSGGVGQAAINLARYMDA--EIFTTVGTPEKREFIRKTFPF---IKEENI-GNSRDTSFEQLVMK 632 (1392)
Q Consensus 559 ~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga--~V~~tv~s~ek~~~l~~~~p~---l~~~~i-~~s~~~~~~~~i~~ 632 (1392)
...+++||++||=. | .|.|.+++.+|++.|. +|++...+++..+.+++.+.. ...+++ +...|.. + .
T Consensus 90 ~~l~i~PG~~VLE~-G-~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~--~---~ 162 (264)
T d1i9ga_ 90 HEGDIFPGARVLEA-G-AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLA--D---S 162 (264)
T ss_dssp HHTTCCTTCEEEEE-C-CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGG--G---C
T ss_pred HHhCCCCCCEEEec-C-cCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecccc--c---c
Confidence 56789999999976 3 4568899999999864 899999998888877764311 111222 2222211 0 0
Q ss_pred HcCCCcceEEE-ecCc-hhHHHHHHhcccCCeEEEEE
Q psy1119 633 RTKGRGVDLVL-NSLA-EEKLQASVRCLAQGGRFLEI 667 (1392)
Q Consensus 633 ~T~g~GvDvVl-ds~~-~~~l~~s~~~La~~Gr~v~i 667 (1392)
..+...+|.|+ |... .+.+....++|+|+|+++.+
T Consensus 163 ~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~ 199 (264)
T d1i9ga_ 163 ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVY 199 (264)
T ss_dssp CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEE
T ss_pred cccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEE
Confidence 12335689665 4332 36789999999999999865
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=87.16 E-value=0.32 Score=47.81 Aligned_cols=74 Identities=18% Similarity=0.191 Sum_probs=48.3
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH-Hhh
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTE-ANK 858 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~-~~~ 858 (1392)
++.++||+||+||.|...+++.-..||+ ++.+.|+..+. +.+++.|+...+.. ++ ...+ ...
T Consensus 23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~-Viat~~s~~k~-------~~~~~lGad~vi~~------~~---~~~~~~~~ 85 (167)
T d1tt7a2 23 EKGSVLVTGATGGVGGIAVSMLNKRGYD-VVASTGNREAA-------DYLKQLGASEVISR------ED---VYDGTLKA 85 (167)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHTCC-EEEEESSSSTH-------HHHHHHTCSEEEEH------HH---HCSSCCCS
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCc-eEEEecCHHHH-------HHHHhhcccceEec------cc---hhchhhhc
Confidence 4568999999999999999998889998 56666664322 22344577654432 11 1111 111
Q ss_pred --cCCccEEEECcc
Q psy1119 859 --LGPVDGIFNLAV 870 (1392)
Q Consensus 859 --~g~I~gvi~~Ag 870 (1392)
-+.+|.||.+.|
T Consensus 86 ~~~~gvd~vid~vg 99 (167)
T d1tt7a2 86 LSKQQWQGAVDPVG 99 (167)
T ss_dssp SCCCCEEEEEESCC
T ss_pred ccCCCceEEEecCc
Confidence 247999999876
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=86.82 E-value=2.5 Score=40.07 Aligned_cols=116 Identities=15% Similarity=0.116 Sum_probs=60.2
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhC-CceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRG-ARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~G-Ar~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
++...|+| +|.+|..+|..|+.+| +..|+|++++.........-+...............|. + ..
T Consensus 5 ~~KI~IIG-aG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~----------~~ 70 (146)
T d1ez4a1 5 HQKVVLVG-DGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S----------DC 70 (146)
T ss_dssp BCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G----------GG
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H----------Hh
Confidence 44677788 5999999999999998 56899999874322211111111111111223344442 2 23
Q ss_pred CCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEec
Q psy1119 860 GPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFS 917 (1392)
Q Consensus 860 g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~S 917 (1392)
..-|.||.+||..+.. .++.. +.+..|+.-...+.+...+.+ +...++++|
T Consensus 71 ~~adivvitag~~~~~---g~~r~---~l~~~N~~i~~~~~~~i~~~~-p~aivivvt 121 (146)
T d1ez4a1 71 KDADLVVITAGAPQKP---GESRL---DLVNKNLNILSSIVKPVVDSG-FDGIFLVAA 121 (146)
T ss_dssp TTCSEEEECCCC----------------CHHHHHHHHHHHHHHHHHTT-CCSEEEECS
T ss_pred ccccEEEEecccccCC---CCCHH---HHHHHHHHHHHHHHHHHhhcC-CCcEEEEeC
Confidence 3579999999975542 23322 233344444444444444444 334555554
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=86.79 E-value=0.35 Score=53.51 Aligned_cols=33 Identities=15% Similarity=0.067 Sum_probs=29.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q psy1119 567 ESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599 (1392)
Q Consensus 567 etVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s 599 (1392)
..|||.||+|=||..++..+...|.+|+++++.
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~ 34 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRR 34 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 468999999999999999999999999999873
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=86.67 E-value=0.99 Score=44.17 Aligned_cols=86 Identities=9% Similarity=0.038 Sum_probs=55.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCC---CC-cCceeeC--CCccHHHHHHHHcCCCcce
Q psy1119 567 ESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPF---IK-EENIGNS--RDTSFEQLVMKRTKGRGVD 640 (1392)
Q Consensus 567 etVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~---l~-~~~i~~s--~~~~~~~~i~~~T~g~GvD 640 (1392)
.+|.|.|+ |.+|++....+...|.+|....+++++.+.+++.... .+ ....... ...+..+.+ +++|
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~------~~aD 74 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV------KDAD 74 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH------TTCS
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh------cCCC
Confidence 57899965 9999999999999999999999999888888764200 00 0000000 011233332 3689
Q ss_pred EEEecCchhHHHHHHhccc
Q psy1119 641 LVLNSLAEEKLQASVRCLA 659 (1392)
Q Consensus 641 vVlds~~~~~l~~s~~~La 659 (1392)
+|+-++........++.++
T Consensus 75 ~iii~v~~~~~~~~~~~i~ 93 (184)
T d1bg6a2 75 VILIVVPAIHHASIAANIA 93 (184)
T ss_dssp EEEECSCGGGHHHHHHHHG
T ss_pred EEEEEEchhHHHHHHHHhh
Confidence 9999987655554444443
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.30 E-value=0.8 Score=49.77 Aligned_cols=104 Identities=17% Similarity=0.235 Sum_probs=65.1
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHCCCC-----------CcCce-eeCCCc
Q psy1119 559 ICGQMQKGESILIHAGSGGVGQAAINLARYMDA--EIFTTVGTPEKREFIRKTFPFI-----------KEENI-GNSRDT 624 (1392)
Q Consensus 559 ~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga--~V~~tv~s~ek~~~l~~~~p~l-----------~~~~i-~~s~~~ 624 (1392)
...+++||++||=. |+ |-|.+++.+|++.|. +|++...+++..+.+++.+... -.+++ +..+|.
T Consensus 92 ~~l~i~pG~rVLE~-Gt-GsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~di 169 (324)
T d2b25a1 92 SMMDINPGDTVLEA-GS-GSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI 169 (324)
T ss_dssp HHHTCCTTCEEEEE-CC-TTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT
T ss_pred HHhCCCCCCEEEEe-cc-cccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecch
Confidence 34589999999876 43 448999999999875 7999999888777776543100 01111 111221
Q ss_pred -cHHHHHHHHcCCCcceEEE-ecCc-hhHHHHHHhcccCCeEEEEEc
Q psy1119 625 -SFEQLVMKRTKGRGVDLVL-NSLA-EEKLQASVRCLAQGGRFLEIG 668 (1392)
Q Consensus 625 -~~~~~i~~~T~g~GvDvVl-ds~~-~~~l~~s~~~La~~Gr~v~iG 668 (1392)
++...+ ....+|.|| |... .+.+....++|+|||+++.+-
T Consensus 170 ~~~~~~~----~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~ 212 (324)
T d2b25a1 170 SGATEDI----KSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV 212 (324)
T ss_dssp TCCC-----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred hhccccc----CCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence 111111 223588665 5443 357899999999999999764
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=86.13 E-value=1.4 Score=47.75 Aligned_cols=39 Identities=13% Similarity=0.078 Sum_probs=31.1
Q ss_pred CCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEecChhhHH
Q psy1119 566 GESILIHAG--SGGVGQAAINLARYMDAEIFTTVGTPEKRE 604 (1392)
Q Consensus 566 GetVLI~ga--~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~ 604 (1392)
++..||.|| +.|+|.+..+-....||+|+.+..+.....
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~ 42 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNI 42 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHH
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhh
Confidence 467899984 469999999998999999998877654433
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=85.86 E-value=1.8 Score=41.21 Aligned_cols=96 Identities=9% Similarity=0.202 Sum_probs=60.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHc--CCEEEEEecC--hhhHHHHHHHCCCCCcCceeeCCCccH----------------
Q psy1119 567 ESILIHAGSGGVGQAAINLARYM--DAEIFTTVGT--PEKREFIRKTFPFIKEENIGNSRDTSF---------------- 626 (1392)
Q Consensus 567 etVLI~ga~GgVG~aaIqlA~~~--Ga~V~~tv~s--~ek~~~l~~~~p~l~~~~i~~s~~~~~---------------- 626 (1392)
.+|.|.|+||.||..+.++.+.. ..+|++.+.. -++.....+.| ....++-..+..+
T Consensus 3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef---~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~ 79 (150)
T d1r0ka2 3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRT---NAKRAVIADPSLYNDLKEALAGSSVEAAA 79 (150)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHT---TCSEEEESCGGGHHHHHHHTTTCSSEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhh---ccccceeccHHHHHHHHHHhhhccccccc
Confidence 58999999999999999999876 4678765543 33443333443 3344433322211
Q ss_pred -HHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEE
Q psy1119 627 -EQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLE 666 (1392)
Q Consensus 627 -~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~ 666 (1392)
.+.+.+.. ...+|+|+++..| .-+...+.+++.+-++..
T Consensus 80 g~~~l~~~~-~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaL 120 (150)
T d1r0ka2 80 GADALVEAA-MMGADWTMAAIIGCAGLKATLAAIRKGKTVAL 120 (150)
T ss_dssp SHHHHHHHH-TSCCSEEEECCCSGGGHHHHHHHHHTTSEEEE
T ss_pred Cccchheec-ccccceeeeecCchhHHHHHHHHHhcCCEEEE
Confidence 12222222 2368999998865 568888888887766543
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=85.77 E-value=1.2 Score=42.62 Aligned_cols=96 Identities=15% Similarity=0.182 Sum_probs=60.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHc--CCEEEEEec--ChhhHHHHHHHCCCCCcCceeeCCCccH-----------------
Q psy1119 568 SILIHAGSGGVGQAAINLARYM--DAEIFTTVG--TPEKREFIRKTFPFIKEENIGNSRDTSF----------------- 626 (1392)
Q Consensus 568 tVLI~ga~GgVG~aaIqlA~~~--Ga~V~~tv~--s~ek~~~l~~~~p~l~~~~i~~s~~~~~----------------- 626 (1392)
+|.|.|++|.||..++.+.+.. ..+|++.+. +-++.......| ....++-.....+
T Consensus 3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f---~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~ 79 (151)
T d1q0qa2 3 QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF---SPRYAVMDDEASAKLLKTMLQQQGSRTEVL 79 (151)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH---CCSEEEESSHHHHHHHHHHHHHTTCCCEEE
T ss_pred eEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH---hhcccccccHHHHHHHHHHhhhhccccccc
Confidence 6899999999999999999886 357775443 334443333443 3344443322221
Q ss_pred --HHHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEE
Q psy1119 627 --EQLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLE 666 (1392)
Q Consensus 627 --~~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~ 666 (1392)
.+.+.+...-..+|+|+++..| .-+...+.+++.+=++..
T Consensus 80 ~g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaL 122 (151)
T d1q0qa2 80 SGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILL 122 (151)
T ss_dssp ESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEE
T ss_pred cChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEE
Confidence 1223333334579999998866 568888888887655443
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=85.76 E-value=1.1 Score=46.00 Aligned_cols=92 Identities=16% Similarity=0.193 Sum_probs=63.2
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceE
Q psy1119 562 QMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDL 641 (1392)
Q Consensus 562 ~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDv 641 (1392)
.+.++.+||=. ||| .|..+..+++ .|++|+++..+++-.+.+++... ..++.....++ . .....+|+
T Consensus 39 ~~~~~~~vLDi-GcG-~G~~~~~l~~-~~~~v~giD~s~~~l~~a~~~~~----~~~~~~~~~~l-----~-~~~~~fD~ 105 (246)
T d2avna1 39 YLKNPCRVLDL-GGG-TGKWSLFLQE-RGFEVVLVDPSKEMLEVAREKGV----KNVVEAKAEDL-----P-FPSGAFEA 105 (246)
T ss_dssp HCCSCCEEEEE-TCT-TCHHHHHHHT-TTCEEEEEESCHHHHHHHHHHTC----SCEEECCTTSC-----C-SCTTCEEE
T ss_pred hcCCCCEEEEE-CCC-Cchhcccccc-cceEEEEeecccccccccccccc----ccccccccccc-----c-cccccccc
Confidence 35678899876 434 7889998887 59999999999999999988642 22333222221 0 12346999
Q ss_pred EEecCc--------hhHHHHHHhcccCCeEEEE
Q psy1119 642 VLNSLA--------EEKLQASVRCLAQGGRFLE 666 (1392)
Q Consensus 642 Vlds~~--------~~~l~~s~~~La~~Gr~v~ 666 (1392)
|+.... ...+....++|+|||.++.
T Consensus 106 ii~~~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii 138 (246)
T d2avna1 106 VLALGDVLSYVENKDKAFSEIRRVLVPDGLLIA 138 (246)
T ss_dssp EEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred eeeecchhhhhhhHHHHHHHHHhhcCcCcEEEE
Confidence 885322 1357788899999999874
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=85.70 E-value=0.26 Score=53.80 Aligned_cols=33 Identities=15% Similarity=0.077 Sum_probs=30.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q psy1119 567 ESILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599 (1392)
Q Consensus 567 etVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s 599 (1392)
.++||+||+|-||..++..+...|.+|+++++.
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~ 34 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR 34 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence 479999999999999999999999999999963
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=85.68 E-value=1.4 Score=42.06 Aligned_cols=75 Identities=13% Similarity=0.180 Sum_probs=50.4
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
.++|.|+ |.+|+.+++.|.++|.. ++++..+. +......+.+...|+ .++.+|.++++-++++ .....
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~-v~vId~d~---~~~~~~~~~~~~~~~--~vi~Gd~~d~~~L~~a-----~i~~a 72 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQN-VTVISNLP---EDDIKQLEQRLGDNA--DVIPGDSNDSSVLKKA-----GIDRC 72 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCC-EEEEECCC---HHHHHHHHHHHCTTC--EEEESCTTSHHHHHHH-----TTTTC
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCC-EEEEeccc---hhHHHHHHHhhcCCc--EEEEccCcchHHHHHh-----ccccC
Confidence 5777755 89999999999999997 55555553 223344555555565 4578999998866543 12356
Q ss_pred cEEEECc
Q psy1119 863 DGIFNLA 869 (1392)
Q Consensus 863 ~gvi~~A 869 (1392)
+.+|-+.
T Consensus 73 ~~vi~~~ 79 (153)
T d1id1a_ 73 RAILALS 79 (153)
T ss_dssp SEEEECS
T ss_pred CEEEEcc
Confidence 6676654
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=85.59 E-value=2.7 Score=38.79 Aligned_cols=73 Identities=11% Similarity=0.054 Sum_probs=54.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCcee--eCCCccHHHHHHHHcCCCcceEEEec
Q psy1119 568 SILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIG--NSRDTSFEQLVMKRTKGRGVDLVLNS 645 (1392)
Q Consensus 568 tVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~--~s~~~~~~~~i~~~T~g~GvDvVlds 645 (1392)
+|+|.|+ |.+|+..++.....|.+|+++..++++.+.+.+.+ +. .++ |..+.+ +++..+-+.+|.++-+
T Consensus 2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~---~~-~vi~Gd~~~~~----~l~~~~i~~a~~vv~~ 72 (132)
T d1lssa_ 2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI---DA-LVINGDCTKIK----TLEDAGIEDADMYIAV 72 (132)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---SS-EEEESCTTSHH----HHHHTTTTTCSEEEEC
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh---hh-hhccCcccchh----hhhhcChhhhhhhccc
Confidence 5899965 99999999999999999999999999998888754 22 233 333333 3334444578999987
Q ss_pred Cchh
Q psy1119 646 LAEE 649 (1392)
Q Consensus 646 ~~~~ 649 (1392)
...+
T Consensus 73 t~~d 76 (132)
T d1lssa_ 73 TGKE 76 (132)
T ss_dssp CSCH
T ss_pred CCcH
Confidence 7654
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=85.56 E-value=1.2 Score=46.90 Aligned_cols=38 Identities=29% Similarity=0.312 Sum_probs=25.4
Q ss_pred HHHHHHHHHhhhc-cCCCCcEEEEeechhHHHHHHHHHHH
Q psy1119 1201 MADSLLPHFKKRL-VHGTDEIKLVGFSFGGMVALELAIKL 1239 (1392)
Q Consensus 1201 lA~~y~~~I~~~q-~qp~gPy~L~G~S~Gg~VA~EmA~~L 1239 (1392)
+++.+++.|.+.. +.++ ...++|+||||..|+.+|.+.
T Consensus 102 ~~~el~~~i~~~~~~d~~-r~~i~G~S~GG~~A~~~a~~~ 140 (288)
T d1sfra_ 102 LTSELPGWLQANRHVKPT-GSAVVGLSMAASSALTLAIYH 140 (288)
T ss_dssp HHTHHHHHHHHHHCBCSS-SEEEEEETHHHHHHHHHHHHC
T ss_pred HHHHhHHHHHHhcCCCCC-ceEEEEEccHHHHHHHHHHhc
Confidence 4455555554321 2233 478999999999999998764
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=85.36 E-value=0.88 Score=42.74 Aligned_cols=77 Identities=12% Similarity=0.220 Sum_probs=52.6
Q ss_pred EEEEEcCCchHHHHHHHHHH-HcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEecC
Q psy1119 568 SILIHAGSGGVGQAAINLAR-YMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLNSL 646 (1392)
Q Consensus 568 tVLI~ga~GgVG~aaIqlA~-~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVlds~ 646 (1392)
+|.|.|++|=+|++.++... ..+.++.+.....+.... . . ..++|+|+|..
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~------------------------~---~-~~~~DvvIDFS 52 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSL------------------------L---T-DGNTEVVIDFT 52 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHH------------------------H---H-TTTCSEEEECC
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhh------------------------h---c-cccCCEEEEcc
Confidence 58999999999999888755 567888766642211100 0 1 13689999988
Q ss_pred chhHHHHHHhcccCCeEEEEEccccc
Q psy1119 647 AEEKLQASVRCLAQGGRFLEIGKFDL 672 (1392)
Q Consensus 647 ~~~~l~~s~~~La~~Gr~v~iG~~~~ 672 (1392)
..+.....++.+...|.-+.+|....
T Consensus 53 ~p~~~~~~~~~~~~~~~~~ViGTTG~ 78 (135)
T d1yl7a1 53 HPDVVMGNLEFLIDNGIHAVVGTTGF 78 (135)
T ss_dssp CTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred cHHHHHHHHHHHHhcCCCEEEecccc
Confidence 87777766766666666667786643
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=85.30 E-value=0.54 Score=49.90 Aligned_cols=56 Identities=27% Similarity=0.333 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHhhhc-cCCCCcEEEEeechhHHHHHHHHHHHHHcCCcc-EEEEEeC
Q psy1119 1198 IPEMADSLLPHFKKRL-VHGTDEIKLVGFSFGGMVALELAIKLEQLGTKC-HLYLVDS 1253 (1392)
Q Consensus 1198 ieelA~~y~~~I~~~q-~qp~gPy~L~G~S~Gg~VA~EmA~~Le~~G~~v-~LvLiD~ 1253 (1392)
...+.....+.|++.. -.|.....+.|||+||.+|.-+|..|...+.+. .++-..+
T Consensus 116 ~~~~~~~i~~~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~l~~~~~~~~~~~tfG~ 173 (271)
T d1tiaa_ 116 WKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATDLRGKGYPSAKLYAYAS 173 (271)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEeccchHHHHHHHHHHHHHHcCCCcceEEEeCC
Confidence 4444444444443221 125667888999999999999999999888754 6665544
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.30 E-value=1.5 Score=48.87 Aligned_cols=102 Identities=16% Similarity=0.231 Sum_probs=64.7
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHC----------C-CCCcCceee---CCC
Q psy1119 559 ICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTF----------P-FIKEENIGN---SRD 623 (1392)
Q Consensus 559 ~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~----------p-~l~~~~i~~---s~~ 623 (1392)
...++++|++||=. | .|+|..++++|+..|| +|+++.-++...+.+++.. + ..+...... ..+
T Consensus 210 ~~l~Lkpgd~fLDL-G-CG~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~~ 287 (406)
T d1u2za_ 210 QQCQLKKGDTFMDL-G-SGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVD 287 (406)
T ss_dssp HHTTCCTTCEEEEE-S-CTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTT
T ss_pred HHhCCCCCCEEEeC-C-CCCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeechhh
Confidence 66789999998766 4 5789999999999997 7999998887666654321 0 011111111 112
Q ss_pred ccHHHHHHHHcCCCcceEEE-ecC--ch---hHHHHHHhcccCCeEEEEE
Q psy1119 624 TSFEQLVMKRTKGRGVDLVL-NSL--AE---EKLQASVRCLAQGGRFLEI 667 (1392)
Q Consensus 624 ~~~~~~i~~~T~g~GvDvVl-ds~--~~---~~l~~s~~~La~~Gr~v~i 667 (1392)
..+.+.. . ..+|+|+ ++. .. ..+...++.|+|||++|..
T Consensus 288 ~~~~d~~---~--~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~ 332 (406)
T d1u2za_ 288 NNRVAEL---I--PQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISL 332 (406)
T ss_dssp CHHHHHH---G--GGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred ccccccc---c--ccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEe
Confidence 2222222 1 2467776 332 22 3467788999999999964
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=85.06 E-value=1 Score=43.64 Aligned_cols=78 Identities=17% Similarity=0.275 Sum_probs=47.7
Q ss_pred cCCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 778 ADSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 778 ~~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
..++.+++|.|+ |++|+..++.+...|++ ++.++++. ...+..++.|+...+ |.++.+..+.+.+..
T Consensus 25 ~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~-Vi~~~~~~-------~~~~~a~~~Ga~~~i---~~~~~~~~~~~~~~~- 91 (166)
T d1llua2 25 ARPGQWVAISGI-GGLGHVAVQYARAMGLH-VAAIDIDD-------AKLELARKLGASLTV---NARQEDPVEAIQRDI- 91 (166)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCE-EEEEESCH-------HHHHHHHHTTCSEEE---ETTTSCHHHHHHHHH-
T ss_pred CCCCCEEEEeec-cccHHHHHHHHHHcCCc-cceecchh-------hHHHhhhccCccccc---cccchhHHHHHHHhh-
Confidence 457788899765 99999999988889986 77777763 123344567876443 444444444333321
Q ss_pred hcCCccEEEECcc
Q psy1119 858 KLGPVDGIFNLAV 870 (1392)
Q Consensus 858 ~~g~I~gvi~~Ag 870 (1392)
+..+.+|-+++
T Consensus 92 --~g~~~~i~~~~ 102 (166)
T d1llua2 92 --GGAHGVLVTAV 102 (166)
T ss_dssp --SSEEEEEECCS
T ss_pred --cCCcccccccc
Confidence 23444444444
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.98 E-value=1.6 Score=44.66 Aligned_cols=100 Identities=17% Similarity=0.103 Sum_probs=61.9
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHCCCCCc-----Cce-eeCCCccHHHHHHH
Q psy1119 561 GQMQKGESILIHAGSGGVGQAAINLARYMD--AEIFTTVGTPEKREFIRKTFPFIKE-----ENI-GNSRDTSFEQLVMK 632 (1392)
Q Consensus 561 a~l~~GetVLI~ga~GgVG~aaIqlA~~~G--a~V~~tv~s~ek~~~l~~~~p~l~~-----~~i-~~s~~~~~~~~i~~ 632 (1392)
..+++|++||-.|. |.|..+.-+|+..| .+|+++..+++-.+.+++.+...+. ..+ +-..|.. . -
T Consensus 72 ~~l~~g~~VLdiG~--GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~--~---~ 144 (224)
T d1i1na_ 72 DQLHEGAKALDVGS--GSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGR--M---G 144 (224)
T ss_dssp TTSCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGG--G---C
T ss_pred hccCCCCeEEEecC--CCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecc--c---c
Confidence 37899999999954 55777888888765 4899999888766666543210010 111 0001100 0 0
Q ss_pred HcCCCcceEEEecCch-hHHHHHHhcccCCeEEEEE
Q psy1119 633 RTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLEI 667 (1392)
Q Consensus 633 ~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~i 667 (1392)
......+|+|+-+.+- +..+..++.|++||++|..
T Consensus 145 ~~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p 180 (224)
T d1i1na_ 145 YAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP 180 (224)
T ss_dssp CGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred cchhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence 1112369998865543 4456778999999999874
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=84.91 E-value=0.37 Score=47.77 Aligned_cols=101 Identities=14% Similarity=0.100 Sum_probs=60.2
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
++++||+||+||+|....+..-..||+ ++.++|+..+ . +.+++.|+...+-.-|....+ .+. -.
T Consensus 32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~-Via~~~~~~k----~---~~~~~lGad~vi~~~~~~~~~-------~l~-~~ 95 (177)
T d1o89a2 32 DGEIVVTGASGGVGSTAVALLHKLGYQ-VVAVSGREST----H---EYLKSLGASRVLPRDEFAESR-------PLE-KQ 95 (177)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTTCC-EEEEESCGGG----H---HHHHHHTEEEEEEGGGSSSCC-------SSC-CC
T ss_pred CCcEEEEEccccchHHHHHHHHHcCCC-eEEEecchhH----H---HHHHhhccccccccccHHHHH-------HHH-hh
Confidence 468999999999999999988889998 5556666422 1 223445776555432221110 111 12
Q ss_pred CccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEeccccccc
Q psy1119 861 PVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSSVSCGR 923 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS~s~~~ 923 (1392)
..|++|.+.|- +.| .+.. +.+...+.+|.++..++..
T Consensus 96 ~~~~vvD~Vgg-----------~~~--------------~~~l-~~l~~~Griv~~G~~~~~~ 132 (177)
T d1o89a2 96 VWAGAIDTVGD-----------KVL--------------AKVL-AQMNYGGCVAACGLAGGFT 132 (177)
T ss_dssp CEEEEEESSCH-----------HHH--------------HHHH-HTEEEEEEEEECCCTTCSC
T ss_pred cCCeeEEEcch-----------HHH--------------HHHH-HHhccccceEeecccCCcc
Confidence 45788877651 111 1222 1224568999998877654
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=84.75 E-value=1 Score=45.22 Aligned_cols=88 Identities=14% Similarity=0.153 Sum_probs=60.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEEe
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVLN 644 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVld 644 (1392)
.|.+|.|. |.|.||+...++++..|++|++........ .-.. .. .-.++.+.+. -.|+|..
T Consensus 42 ~gk~vgIi-G~G~IG~~va~~l~~fg~~V~~~d~~~~~~-~~~~---~~--------~~~~l~~~l~------~sDii~~ 102 (197)
T d1j4aa1 42 RDQVVGVV-GTGHIGQVFMQIMEGFGAKVITYDIFRNPE-LEKK---GY--------YVDSLDDLYK------QADVISL 102 (197)
T ss_dssp GGSEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHT---TC--------BCSCHHHHHH------HCSEEEE
T ss_pred cCCeEEEe-cccccchhHHHhHhhhcccccccCcccccc-cccc---ee--------eecccccccc------ccccccc
Confidence 48899999 669999999999999999999887543322 1111 11 1123333332 3688888
Q ss_pred cCc--hh---H-HHHHHhcccCCeEEEEEcccc
Q psy1119 645 SLA--EE---K-LQASVRCLAQGGRFLEIGKFD 671 (1392)
Q Consensus 645 s~~--~~---~-l~~s~~~La~~Gr~v~iG~~~ 671 (1392)
++. .+ . -...+++++++..+|.++...
T Consensus 103 ~~plt~~T~~li~~~~l~~mk~~a~lIN~sRG~ 135 (197)
T d1j4aa1 103 HVPDVPANVHMINDESIAKMKQDVVIVNVSRGP 135 (197)
T ss_dssp CSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGG
T ss_pred cCCccccccccccHHHHhhhCCccEEEecCchh
Confidence 764 22 1 256788999999999988653
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=84.47 E-value=1.5 Score=46.67 Aligned_cols=87 Identities=21% Similarity=0.277 Sum_probs=49.9
Q ss_pred ceeEeecCCC---ccccccHHHHhhcCC--ceEEEecC-----CCCCCCCHHHHHHHHHHHHhhhcc---CCCCcEEEEe
Q psy1119 1158 NTIFMVPGIE---GIATVLEPLAKNINA--QVLVFQFD-----HTNPPDTIPEMADSLLPHFKKRLV---HGTDEIKLVG 1224 (1392)
Q Consensus 1158 ~pLF~vp~ag---G~~~~y~~La~~L~~--~~~v~~l~-----~e~~~~sieelA~~y~~~I~~~q~---qp~gPy~L~G 1224 (1392)
|-|++||++| |+...+..++..+.. .+.++.+. ....+..+++..+.+.- ++...- -......+.|
T Consensus 73 Pvvv~iHGGg~~~g~~~~~~~~~~~~a~~~~~~v~~v~Yrl~p~~~~p~~~~D~~~~~~~-l~~~~~~~~~d~~ri~~~G 151 (308)
T d1u4na_ 73 PALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQW-IAERAADFHLDPARIAVGG 151 (308)
T ss_dssp EEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHH-HHTTTGGGTEEEEEEEEEE
T ss_pred CEEEEEecCeeeeeccccccchhhhhhhcccccccccccccccccccccccchhhhhhhH-HHHhHHhcCCCcceEEEee
Confidence 3478888864 566777777666643 23344433 22223344444433322 221100 0012378999
Q ss_pred echhHHHHHHHHHHHHHcCCc
Q psy1119 1225 FSFGGMVALELAIKLEQLGTK 1245 (1392)
Q Consensus 1225 ~S~Gg~VA~EmA~~Le~~G~~ 1245 (1392)
+|+||.+|.-++......+..
T Consensus 152 ~SaGG~la~~~~~~~~~~~~~ 172 (308)
T d1u4na_ 152 DSAGGNLAAVTSILAKERGGP 172 (308)
T ss_dssp ETHHHHHHHHHHHHHHHHTCC
T ss_pred ccccchhHHHHHHhhhhccCC
Confidence 999999999999888776643
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=84.42 E-value=0.75 Score=49.62 Aligned_cols=30 Identities=20% Similarity=0.295 Sum_probs=28.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q psy1119 568 SILIHAGSGGVGQAAINLARYMDAEIFTTV 597 (1392)
Q Consensus 568 tVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv 597 (1392)
+|||.||+|-||...+..+...|.+|++.+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id 31 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFD 31 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence 799999999999999999988999999875
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=84.33 E-value=1.3 Score=43.85 Aligned_cols=90 Identities=14% Similarity=0.092 Sum_probs=61.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEE
Q psy1119 564 QKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVL 643 (1392)
Q Consensus 564 ~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVl 643 (1392)
-.|.+|.|. |.|.+|+...++++..|++|++......+...... +.. -.++.+.+. ..|+|.
T Consensus 42 l~~k~vgii-G~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~-----~~~------~~~l~ell~------~sDiv~ 103 (184)
T d1ygya1 42 IFGKTVGVV-GLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQL-----GIE------LLSLDDLLA------RADFIS 103 (184)
T ss_dssp CTTCEEEEE-CCSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHH-----TCE------ECCHHHHHH------HCSEEE
T ss_pred ccceeeeec-cccchhHHHHHHhhhccceEEeecCCCChhHHhhc-----Cce------eccHHHHHh------hCCEEE
Confidence 357899999 55999999999999999999998876544333222 111 123433332 368888
Q ss_pred ecCc--hh---H-HHHHHhcccCCeEEEEEcccc
Q psy1119 644 NSLA--EE---K-LQASVRCLAQGGRFLEIGKFD 671 (1392)
Q Consensus 644 ds~~--~~---~-l~~s~~~La~~Gr~v~iG~~~ 671 (1392)
-++. .+ . -...++.++++..+|.+|...
T Consensus 104 ~~~Plt~~T~~lin~~~l~~mk~~a~lIN~sRG~ 137 (184)
T d1ygya1 104 VHLPKTPETAGLIDKEALAKTKPGVIIVNAARGG 137 (184)
T ss_dssp ECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTT
T ss_pred EcCCCCchhhhhhhHHHHhhhCCCceEEEecchh
Confidence 7664 22 2 257788999999999988653
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=84.30 E-value=0.45 Score=50.23 Aligned_cols=96 Identities=14% Similarity=0.212 Sum_probs=63.3
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCC--CCCc-CceeeCCCccHHHHHHHHcCCCc
Q psy1119 562 QMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFP--FIKE-ENIGNSRDTSFEQLVMKRTKGRG 638 (1392)
Q Consensus 562 ~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p--~l~~-~~i~~s~~~~~~~~i~~~T~g~G 638 (1392)
.+++|++||-.++ |+|..++.+|+.-+++|+++.-+++..+++++..- ++.. -.+++.+..++ .....
T Consensus 104 ~~~~g~~VlD~~a--G~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~-------~~~~~ 174 (260)
T d2frna1 104 VAKPDELVVDMFA--GIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF-------PGENI 174 (260)
T ss_dssp HCCTTCEEEETTC--TTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC-------CCCSC
T ss_pred hcCCccEEEECcc--eEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHh-------ccCCC
Confidence 3689999998743 66777778888766799999999988888875431 2322 12333322222 22335
Q ss_pred ceEE-EecC--chhHHHHHHhcccCCeEEEE
Q psy1119 639 VDLV-LNSL--AEEKLQASVRCLAQGGRFLE 666 (1392)
Q Consensus 639 vDvV-lds~--~~~~l~~s~~~La~~Gr~v~ 666 (1392)
+|.| +|-. +.+.+..+++++++||.+..
T Consensus 175 ~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~ 205 (260)
T d2frna1 175 ADRILMGYVVRTHEFIPKALSIAKDGAIIHY 205 (260)
T ss_dssp EEEEEECCCSSGGGGHHHHHHHEEEEEEEEE
T ss_pred CCEEEECCCCchHHHHHHHHhhcCCCCEEEE
Confidence 7855 4532 34678899999999997643
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=84.06 E-value=0.38 Score=51.21 Aligned_cols=40 Identities=20% Similarity=0.165 Sum_probs=26.5
Q ss_pred HHHHHHHHHhhhccCCCCcEEEEeechhHHHHHHHHHHHH
Q psy1119 1201 MADSLLPHFKKRLVHGTDEIKLVGFSFGGMVALELAIKLE 1240 (1392)
Q Consensus 1201 lA~~y~~~I~~~q~qp~gPy~L~G~S~Gg~VA~EmA~~Le 1240 (1392)
+++.+++.|.+........-.++|+||||..|+.+|.+.-
T Consensus 97 ~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~P 136 (280)
T d1dqza_ 97 LTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYP 136 (280)
T ss_dssp HHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCc
Confidence 4555666665331112234679999999999999997654
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=84.02 E-value=0.39 Score=49.69 Aligned_cols=36 Identities=22% Similarity=0.237 Sum_probs=32.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh
Q psy1119 567 ESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEK 602 (1392)
Q Consensus 567 etVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek 602 (1392)
.++||.||++|+|.+.++.....|++|+.+..++++
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~ 37 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG 37 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence 578999999999999999999999999999876543
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=83.82 E-value=0.69 Score=46.88 Aligned_cols=96 Identities=18% Similarity=0.138 Sum_probs=61.5
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCc-CceeeCCCccHHHHHHHHcCCCcce
Q psy1119 562 QMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKE-ENIGNSRDTSFEQLVMKRTKGRGVD 640 (1392)
Q Consensus 562 ~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~-~~i~~s~~~~~~~~i~~~T~g~GvD 640 (1392)
.++++++||=.|+ | .|..++.+|+ .|++|+++.-|++-.+.+++.....+. ...+.....++ ......+|
T Consensus 34 ~l~~~~~ILDiGc-G-~G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l------~~~~~~fD 104 (226)
T d1ve3a1 34 YMKKRGKVLDLAC-G-VGGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKL------SFEDKTFD 104 (226)
T ss_dssp SCCSCCEEEEETC-T-TSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSC------CSCTTCEE
T ss_pred hcCCCCEEEEECC-C-cchhhhhHhh-hhcccccccccccchhhhhhhhccccccccccccccccc------cccCcCce
Confidence 4688999998844 3 4778888887 589999999998887777654321111 11121111110 01234699
Q ss_pred EEEecCc-----h-h---HHHHHHhcccCCeEEEE
Q psy1119 641 LVLNSLA-----E-E---KLQASVRCLAQGGRFLE 666 (1392)
Q Consensus 641 vVlds~~-----~-~---~l~~s~~~La~~Gr~v~ 666 (1392)
+|+-... . + .+....++|+|||+++.
T Consensus 105 ~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii 139 (226)
T d1ve3a1 105 YVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIM 139 (226)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEE
Confidence 9875322 1 2 46778899999999874
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=83.81 E-value=1.6 Score=40.05 Aligned_cols=55 Identities=22% Similarity=0.282 Sum_probs=38.4
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCc------ccHHHHHHHHHHhcCCceEE
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGV------KNGYQALRIKIWKSYDVQVL 837 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~------~~~~~~~~~~~l~~~G~~v~ 837 (1392)
.+..+|.|| |-+|.++|..|+++|.+ |.++.|+.. .....+...+.+++.|+++.
T Consensus 30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~-Vtli~~~~~~l~~~~~~~~~~~~~~~l~~~GV~i~ 90 (121)
T d1d7ya2 30 QSRLLIVGG-GVIGLELAATARTAGVH-VSLVETQPRLMSRAAPATLADFVARYHAAQGVDLR 90 (121)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCE-EEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEE
T ss_pred CCeEEEECc-chhHHHHHHHhhcccce-EEEEeeccccccccCCHHHHHHHHHHHHHCCcEEE
Confidence 456777754 79999999999999987 777776642 11223344456778888765
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=83.67 E-value=1.4 Score=46.20 Aligned_cols=84 Identities=11% Similarity=0.078 Sum_probs=45.6
Q ss_pred CCceeEeecCCCccc--cccHH---HHhhcC-CceEEEecCC----------CCCCCCHH-HHHHHHHHHHhhhccCCCC
Q psy1119 1156 NNNTIFMVPGIEGIA--TVLEP---LAKNIN-AQVLVFQFDH----------TNPPDTIP-EMADSLLPHFKKRLVHGTD 1218 (1392)
Q Consensus 1156 ~~~pLF~vp~agG~~--~~y~~---La~~L~-~~~~v~~l~~----------e~~~~sie-elA~~y~~~I~~~q~qp~g 1218 (1392)
..|.|+++|+.+|.. ..|.. +.+... .++.|+-... .......+ -+++.+++.|.+...-..+
T Consensus 26 ~~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~~~~~y~~~~~~~~~~~~tfl~~eL~~~i~~~~~~d~~ 105 (267)
T d1r88a_ 26 GPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDWLAANRGLAPG 105 (267)
T ss_dssp SSSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHHHHHHHSCCCSS
T ss_pred CCCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCCCCcCCccccccccccHHHHHHHHHHHHHHHhcCCCCC
Confidence 347799999987642 22322 222222 2343333220 11112243 3455566666533211233
Q ss_pred cEEEEeechhHHHHHHHHHHH
Q psy1119 1219 EIKLVGFSFGGMVALELAIKL 1239 (1392)
Q Consensus 1219 Py~L~G~S~Gg~VA~EmA~~L 1239 (1392)
-..+.|+||||..|+.+|.+-
T Consensus 106 r~~i~G~SmGG~~Al~la~~~ 126 (267)
T d1r88a_ 106 GHAAVGAAQGGYGAMALAAFH 126 (267)
T ss_dssp CEEEEEETHHHHHHHHHHHHC
T ss_pred ceEEEEEcchHHHHHHHHHhC
Confidence 477999999999999999754
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=83.56 E-value=0.66 Score=43.26 Aligned_cols=69 Identities=25% Similarity=0.276 Sum_probs=44.8
Q ss_pred EEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHh-cCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 784 YIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK-SYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~-~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
.+|.| .|-+|+.+|+.|.++|.. ++++.++. .. ++.++ ..|. .++.+|.++++-++++ .....
T Consensus 3 IvI~G-~G~~G~~la~~L~~~g~~-v~vid~d~----~~---~~~~~~~~~~--~vi~Gd~~~~~~l~~~-----~i~~a 66 (132)
T d1lssa_ 3 IIIAG-IGRVGYTLAKSLSEKGHD-IVLIDIDK----DI---CKKASAEIDA--LVINGDCTKIKTLEDA-----GIEDA 66 (132)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCE-EEEEESCH----HH---HHHHHHHCSS--EEEESCTTSHHHHHHT-----TTTTC
T ss_pred EEEEC-CCHHHHHHHHHHHHCCCC-cceecCCh----hh---hhhhhhhhhh--hhccCcccchhhhhhc-----Chhhh
Confidence 44555 599999999999999987 77777663 11 22222 2354 4677999999876643 12245
Q ss_pred cEEEEC
Q psy1119 863 DGIFNL 868 (1392)
Q Consensus 863 ~gvi~~ 868 (1392)
+.++-.
T Consensus 67 ~~vv~~ 72 (132)
T d1lssa_ 67 DMYIAV 72 (132)
T ss_dssp SEEEEC
T ss_pred hhhccc
Confidence 555553
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=83.43 E-value=0.97 Score=44.67 Aligned_cols=106 Identities=16% Similarity=0.072 Sum_probs=59.7
Q ss_pred HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH-------HHHCCCCCcCceeeCCCccH
Q psy1119 555 YAMFICGQMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFI-------RKTFPFIKEENIGNSRDTSF 626 (1392)
Q Consensus 555 ~aL~~~a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l-------~~~~p~l~~~~i~~s~~~~~ 626 (1392)
.+|...+---+|.+|||.|+ ||.|.+++..+...|+ +++...+++++.+.+ .+.++ ....+.+..+.+
T Consensus 7 ~~l~~~~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~- 82 (182)
T d1vi2a1 7 RAIKESGFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTD--CVVTVTDLADQQ- 82 (182)
T ss_dssp HHHHHTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS--CEEEEEETTCHH-
T ss_pred HHHHHcCCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcC--cceEeeeccccc-
Confidence 34444432246889999955 9999999988888898 466777766544322 22221 111223332221
Q ss_pred HHHHHHHcCCCcceEEEecCchh-------HHHHHHhcccCCeEEEEEc
Q psy1119 627 EQLVMKRTKGRGVDLVLNSLAEE-------KLQASVRCLAQGGRFLEIG 668 (1392)
Q Consensus 627 ~~~i~~~T~g~GvDvVlds~~~~-------~l~~s~~~La~~Gr~v~iG 668 (1392)
.+...+ ..+|+|+||.+-. .+..-+..+.+++.++++-
T Consensus 83 --~~~~~~--~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~ 127 (182)
T d1vi2a1 83 --AFAEAL--ASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECV 127 (182)
T ss_dssp --HHHHHH--HTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECC
T ss_pred --chhhhh--cccceeccccCCccccccchhhhhHHHhhhcchhhHHhh
Confidence 222222 2589999987521 1111234567777777764
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=83.42 E-value=1.4 Score=44.96 Aligned_cols=75 Identities=17% Similarity=0.162 Sum_probs=49.7
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhcCCc
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKLGPV 862 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g~I 862 (1392)
.||=.-.+|-.|.+||+.+..+||...++.+...... ..+.++ ..+.+.+++...+... +..-
T Consensus 24 R~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~-----------p~~~~~----~~~~t~~~m~~~~~~~--~~~~ 86 (223)
T d1u7za_ 24 RYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT-----------PPFVKR----VDVMTALEMEAAVNAS--VQQQ 86 (223)
T ss_dssp EEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC-----------CTTEEE----EECCSHHHHHHHHHHH--GGGC
T ss_pred ceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCc-----------cccccc----ceehhhHHHHHHHHhh--hccc
Confidence 4566668999999999999999998555554432111 123332 2456666666555443 3467
Q ss_pred cEEEECcccCCC
Q psy1119 863 DGIFNLAVVLKD 874 (1392)
Q Consensus 863 ~gvi~~Agv~~d 874 (1392)
|.+|++|.+...
T Consensus 87 D~~i~aAAvsDf 98 (223)
T d1u7za_ 87 NIFIGCAAVADY 98 (223)
T ss_dssp SEEEECCBCCSE
T ss_pred eeEeeeechhhh
Confidence 999999998654
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=83.23 E-value=2.9 Score=37.52 Aligned_cols=89 Identities=13% Similarity=0.113 Sum_probs=58.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh--hhHHHHHHHCCCCCcCceee--CCCccHHHHHHHHcCCCcce
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTP--EKREFIRKTFPFIKEENIGN--SRDTSFEQLVMKRTKGRGVD 640 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~--ek~~~l~~~~p~l~~~~i~~--s~~~~~~~~i~~~T~g~GvD 640 (1392)
.|.+|||.|| |.+|..-++.....||+|++..... +-..++.+ +.-.+.. ....++ .+++
T Consensus 11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~dl----------~~~~ 74 (113)
T d1pjqa1 11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANE-----GMLTLVEGPFDETLL----------DSCW 74 (113)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTT-----TSCEEEESSCCGGGG----------TTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhc-----CCceeeccCCCHHHh----------CCCc
Confidence 5889999966 9999999999999999988776533 32233221 1111121 111111 3789
Q ss_pred EEEecCchhHH-HHHHhcccCCeEEEEEcc
Q psy1119 641 LVLNSLAEEKL-QASVRCLAQGGRFLEIGK 669 (1392)
Q Consensus 641 vVlds~~~~~l-~~s~~~La~~Gr~v~iG~ 669 (1392)
+|+-+.+.+.+ ....+..++.|.+|.+..
T Consensus 75 lv~~at~d~~~n~~i~~~a~~~~ilVNv~D 104 (113)
T d1pjqa1 75 LAIAATDDDTVNQRVSDAAESRRIFCNVVD 104 (113)
T ss_dssp EEEECCSCHHHHHHHHHHHHHTTCEEEETT
T ss_pred EEeecCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 99998876554 455677788899988753
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=82.93 E-value=0.5 Score=46.28 Aligned_cols=37 Identities=24% Similarity=0.364 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCC
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSG 816 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~ 816 (1392)
.+++.++|.|+ ||-+++++..|.+.|+++|.++.|+.
T Consensus 15 ~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~ 51 (167)
T d1npya1 15 NKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNV 51 (167)
T ss_dssp CTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCH
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccH
Confidence 45778888865 89999999999999999999999984
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=82.90 E-value=2.6 Score=40.95 Aligned_cols=75 Identities=19% Similarity=0.166 Sum_probs=48.4
Q ss_pred CCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhhc
Q psy1119 780 SNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANKL 859 (1392)
Q Consensus 780 ~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~ 859 (1392)
++++++|. |+||-+++++..|.+. .++|.++.|+. +..+...+.+...+ .+....-|- ...
T Consensus 17 ~~k~vlIl-GaGGaarai~~aL~~~-~~~i~I~nR~~---~~a~~l~~~~~~~~-~~~~~~~~~-------------~~~ 77 (171)
T d1p77a1 17 PNQHVLIL-GAGGATKGVLLPLLQA-QQNIVLANRTF---SKTKELAERFQPYG-NIQAVSMDS-------------IPL 77 (171)
T ss_dssp TTCEEEEE-CCSHHHHTTHHHHHHT-TCEEEEEESSH---HHHHHHHHHHGGGS-CEEEEEGGG-------------CCC
T ss_pred CCCEEEEE-CCcHHHHHHHHHHccc-CceeeeccchH---HHHHHHHHHHhhcc-ccchhhhcc-------------ccc
Confidence 56777777 5588899999999874 46799999994 23334444444332 444444331 124
Q ss_pred CCccEEEECcccCC
Q psy1119 860 GPVDGIFNLAVVLK 873 (1392)
Q Consensus 860 g~I~gvi~~Agv~~ 873 (1392)
...|.|||+..+..
T Consensus 78 ~~~diiIN~tp~g~ 91 (171)
T d1p77a1 78 QTYDLVINATSAGL 91 (171)
T ss_dssp SCCSEEEECCCC--
T ss_pred cccceeeecccccc
Confidence 57899999986543
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=82.85 E-value=0.58 Score=52.25 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=29.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q psy1119 566 GESILIHAGSGGVGQAAINLARYMDAEIFTTV 597 (1392)
Q Consensus 566 GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv 597 (1392)
|.+|||.||+|=||..++......|.+|++++
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD 32 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD 32 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence 78999999999999999999999999999886
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=82.68 E-value=0.78 Score=45.05 Aligned_cols=42 Identities=19% Similarity=0.224 Sum_probs=37.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q psy1119 568 SILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKT 609 (1392)
Q Consensus 568 tVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~ 609 (1392)
+|.|.||+|++|.+..+.....|++|+...+++++.+.+.+.
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~ 43 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE 43 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 578888999999999999999999999999999888777653
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=82.34 E-value=5.7 Score=37.35 Aligned_cols=107 Identities=18% Similarity=0.180 Sum_probs=62.9
Q ss_pred EEEEcCcchHHHHHHHHHHHhC-CceEEEecCCCcccH---HHHHHHHHHhcCC--ceEEEEeccCCCHHHHHHHHHHHh
Q psy1119 784 YIICGGLGGFGLELADWLVLRG-ARKLVLTSRSGVKNG---YQALRIKIWKSYD--VQVLISTDDITTEAGVVNLLTEAN 857 (1392)
Q Consensus 784 ylItGG~gGiG~~lA~~La~~G-Ar~lvl~sRs~~~~~---~~~~~~~~l~~~G--~~v~~~~~Dv~~~~~v~~l~~~~~ 857 (1392)
..|+|++|.+|..+|..|+.+| +..|+|+.++..... ......+.....+ .++.....+ +. +
T Consensus 3 V~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~----------~ 70 (145)
T d1hyea1 3 VTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NL----------R 70 (145)
T ss_dssp EEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CG----------G
T ss_pred EEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hH----------H
Confidence 6799999999999999999998 678999988742211 1111111111223 344443332 11 2
Q ss_pred hcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCC
Q psy1119 858 KLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCP 908 (1392)
Q Consensus 858 ~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~ 908 (1392)
.+..-|.||-+||..+. ..+|..+ .+..|+.-...+.+...+.++
T Consensus 71 ~l~~aDvVVitAG~~~~---~g~sR~d---l~~~Na~iv~~i~~~i~~~~~ 115 (145)
T d1hyea1 71 IIDESDVVIITSGVPRK---EGMSRMD---LAKTNAKIVGKYAKKIAEICD 115 (145)
T ss_dssp GGTTCSEEEECCSCCCC---TTCCHHH---HHHHHHHHHHHHHHHHHHHCC
T ss_pred HhccceEEEEecccccC---CCCChhh---hhhhhHHHHHHHHHHHhccCC
Confidence 23468999999997543 3456544 344454444555555555554
|
| >d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=82.21 E-value=0.99 Score=45.51 Aligned_cols=62 Identities=13% Similarity=-0.018 Sum_probs=36.9
Q ss_pred Cchh-HhHHHHHHhhhcCCCceEEEEEcCCCCCCCCCChhHHHHHhhcCc-eEEEEecCcccceee
Q psy1119 346 PLSG-IIGFFNCIRKETGGERTRCFEILDKNAPPFNPEDPFYKVQVEKDL-AVNILRNGQWGTYRH 409 (1392)
Q Consensus 346 ~~~~-~~Gl~r~lr~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~r~g~~~~~~~ 409 (1392)
|..+ ++||+|++++|+|....+++.++..... ........+....+. ....+|+|.+..-|.
T Consensus 140 p~~A~l~Gl~r~~~~E~P~l~~~~vDl~~~~~~--~~~~~l~~~l~~~~~E~evAlR~g~r~v~RL 203 (209)
T d2fr1a2 140 AAHGALWGVGRVIALENPAVWGGLVDVPAGSVA--ELARHLAAVVSGGAGEDQLALRADGVYGRRW 203 (209)
T ss_dssp GGGHHHHHHHHHHHHHCGGGEEEEEEECTTCCT--THHHHHHHHHTCSSCCCEEEEETTEEEEEEE
T ss_pred HhHHhHHHHHHHHHHhCCCceEEEEECCCCCCh--HHHHHHHHHHhcCCCCCEEEEECCeEEEeee
Confidence 4434 8999999999999866777777532211 111223344333332 356889988544443
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=82.13 E-value=1.5 Score=39.91 Aligned_cols=54 Identities=20% Similarity=0.228 Sum_probs=38.5
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCc-----ccHHHHHHHHHHhcCCceEE
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGV-----KNGYQALRIKIWKSYDVQVL 837 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~-----~~~~~~~~~~~l~~~G~~v~ 837 (1392)
+..+|.|| |=||.++|..|++.|.+ +.++.|+.. ..+......+.+++.|+++.
T Consensus 23 ~~i~IiG~-G~ig~E~A~~l~~~G~~-Vtiv~~~~~ll~~~d~ei~~~l~~~l~~~Gv~i~ 81 (119)
T d3lada2 23 GKLGVIGA-GVIGLELGSVWARLGAE-VTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKIL 81 (119)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCE-EEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEE
T ss_pred CeEEEECC-ChHHHHHHHHHHHcCCc-eEEEEeecccCCcccchhHHHHHHHHHhcCceee
Confidence 56788855 78999999999999998 555555532 23344555666777787654
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=82.13 E-value=0.88 Score=46.80 Aligned_cols=101 Identities=15% Similarity=0.134 Sum_probs=66.6
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHCCCCCcCce--eeCCCccHHHHHHHHcC
Q psy1119 560 CGQMQKGESILIHAGSGGVGQAAINLARYMD--AEIFTTVGTPEKREFIRKTFPFIKEENI--GNSRDTSFEQLVMKRTK 635 (1392)
Q Consensus 560 ~a~l~~GetVLI~ga~GgVG~aaIqlA~~~G--a~V~~tv~s~ek~~~l~~~~p~l~~~~i--~~s~~~~~~~~i~~~T~ 635 (1392)
...++||++||=.|+ |-|..+..+|+..| .+||++.-+++..+.+++.....+.... .+.+... .... .
T Consensus 68 ~l~i~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~---~~~~-~- 140 (227)
T d1g8aa_ 68 NFPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPE---EYRA-L- 140 (227)
T ss_dssp CCCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGG---GGTT-T-
T ss_pred ccccCCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcc---cccc-c-
Confidence 346899999998855 45788999999876 4899999999888887765322221111 1222221 1111 1
Q ss_pred CCcceEEEecCch-----hHHHHHHhcccCCeEEEEE
Q psy1119 636 GRGVDLVLNSLAE-----EKLQASVRCLAQGGRFLEI 667 (1392)
Q Consensus 636 g~GvDvVlds~~~-----~~l~~s~~~La~~Gr~v~i 667 (1392)
-..+|+|+..+.. ..+..+.+.|+++|+++..
T Consensus 141 ~~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~ 177 (227)
T d1g8aa_ 141 VPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence 1358988875531 2577888999999999864
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=82.09 E-value=1.5 Score=40.23 Aligned_cols=54 Identities=15% Similarity=0.142 Sum_probs=38.5
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCC----cccHHHHHHHHHHhcCCceEE
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSG----VKNGYQALRIKIWKSYDVQVL 837 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~----~~~~~~~~~~~~l~~~G~~v~ 837 (1392)
+..+|+|| |=||.++|..|.+.|++ |.++.|+. .+.+......+.+++.|+++.
T Consensus 21 ~~vvIIGg-G~iG~E~A~~l~~lG~~-Vtii~~~~~l~~~D~~~~~~l~~~l~~~Gv~i~ 78 (122)
T d1h6va2 21 GKTLVVGA-SYVALECAGFLAGIGLD-VTVMVRSILLRGFDQDMANKIGEHMEEHGIKFI 78 (122)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCC-EEEEESSSSSTTSCHHHHHHHHHHHHHTTEEEE
T ss_pred CeEEEECC-CccHHHHHHHHhhcCCe-EEEEEechhhccCCHHHHHHHHHHHHHCCCEEE
Confidence 45777755 78999999999999997 55556763 223345556667788887764
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=82.03 E-value=1.8 Score=42.15 Aligned_cols=75 Identities=15% Similarity=0.073 Sum_probs=49.5
Q ss_pred CCCCeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 779 DSNKSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWKSYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 779 ~~~~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
.+++.++|.|+ ||-+++++-.|.+.|++ |.++.|+.. ..+...+.+...+ .+.....| + ..
T Consensus 16 ~~~k~vlIlGa-GGaarai~~al~~~g~~-i~I~nRt~~---ka~~l~~~~~~~~-~~~~~~~~--~-----------~~ 76 (170)
T d1nyta1 16 RPGLRILLIGA-GGASRGVLLPLLSLDCA-VTITNRTVS---RAEELAKLFAHTG-SIQALSMD--E-----------LE 76 (170)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCE-EEEECSSHH---HHHHHHHHTGGGS-SEEECCSG--G-----------GT
T ss_pred CCCCEEEEECC-cHHHHHHHHHhcccceE-EEeccchHH---HHHHHHHHHhhcc-cccccccc--c-----------cc
Confidence 35788999965 88999999999999996 999999853 2334444444443 22222211 1 11
Q ss_pred cCCccEEEECcccC
Q psy1119 859 LGPVDGIFNLAVVL 872 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~ 872 (1392)
....|.|||+.-+.
T Consensus 77 ~~~~dliIN~Tp~G 90 (170)
T d1nyta1 77 GHEFDLIINATSSG 90 (170)
T ss_dssp TCCCSEEEECCSCG
T ss_pred ccccceeecccccC
Confidence 24689999997543
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.96 E-value=0.35 Score=49.96 Aligned_cols=37 Identities=14% Similarity=0.126 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChh
Q psy1119 565 KGESILIHAGSGGVGQAAINLARYMDA--EIFTTVGTPE 601 (1392)
Q Consensus 565 ~GetVLI~ga~GgVG~aaIqlA~~~Ga--~V~~tv~s~e 601 (1392)
.+.+|||.||+|-||...++.+...|. +|++.++++.
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~ 51 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL 51 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChh
Confidence 357999999999999999998888885 8999987553
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=81.82 E-value=1.7 Score=39.34 Aligned_cols=55 Identities=27% Similarity=0.399 Sum_probs=39.3
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCc-----ccHHHHHHHHHHhcCCceEEE
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGV-----KNGYQALRIKIWKSYDVQVLI 838 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~-----~~~~~~~~~~~l~~~G~~v~~ 838 (1392)
+..+|.|| |-+|.++|..|++.|.+ |.++.|+.. ..+..+...+.+++.|+++..
T Consensus 23 ~~v~IiGg-G~ig~E~A~~l~~~G~~-Vtlve~~~~il~~~d~~~~~~l~~~l~~~GI~i~~ 82 (117)
T d1ebda2 23 KSLVVIGG-GYIGIELGTAYANFGTK-VTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVT 82 (117)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCE-EEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECC-CccceeeeeeecccccE-EEEEEecceecccccchhHHHHHHHHHhcCCEEEc
Confidence 56777755 78999999999999998 666666542 123345556677788877653
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=81.71 E-value=1.1 Score=40.86 Aligned_cols=68 Identities=15% Similarity=0.180 Sum_probs=50.2
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceE
Q psy1119 562 QMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDL 641 (1392)
Q Consensus 562 ~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDv 641 (1392)
.++..++|+|.|| |.+|.-+.+....+|++|....+.+. ++..-+.++.+.+++....+|+++
T Consensus 18 ~l~~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~----------------il~~~d~~~~~~~~~~l~~~gV~i 80 (117)
T d1onfa2 18 NIKESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR----------------ILRKFDESVINVLENDMKKNNINI 80 (117)
T ss_dssp TCCCCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS----------------SCTTSCHHHHHHHHHHHHHTTCEE
T ss_pred ccCCCCEEEEECC-chHHHHHHHHHHhccccceeeehhcc----------------ccccccHHHHHHHHHHHHhCCCEE
Confidence 3455689999966 99999999999999999998876531 121224566667776666679999
Q ss_pred EEecC
Q psy1119 642 VLNSL 646 (1392)
Q Consensus 642 Vlds~ 646 (1392)
.+++-
T Consensus 81 ~~~~~ 85 (117)
T d1onfa2 81 VTFAD 85 (117)
T ss_dssp ECSCC
T ss_pred EECCE
Confidence 98854
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=81.68 E-value=6.6 Score=37.15 Aligned_cols=116 Identities=8% Similarity=-0.021 Sum_probs=63.3
Q ss_pred eEEEEcCcchHHHHHHHHHHHhCCc--------eEEEecCCCcccHHHHHHHHHHhcC-CceEEEEeccCCCHHHHHHHH
Q psy1119 783 SYIICGGLGGFGLELADWLVLRGAR--------KLVLTSRSGVKNGYQALRIKIWKSY-DVQVLISTDDITTEAGVVNLL 853 (1392)
Q Consensus 783 ~ylItGG~gGiG~~lA~~La~~GAr--------~lvl~sRs~~~~~~~~~~~~~l~~~-G~~v~~~~~Dv~~~~~v~~l~ 853 (1392)
.+.|+|++|.+|..+|-.|+..+.- +++...+. .+........+... ...+..+...-.+.+
T Consensus 6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 76 (154)
T d1y7ta1 6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA---MKALEGVVMELEDCAFPLLAGLEATDDPKV------ 76 (154)
T ss_dssp EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHTTTCTTEEEEEEESCHHH------
T ss_pred EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccc---hhhHcCchhhhhccccccccccccCCchhh------
Confidence 5789999999999999999987641 22322222 12222222222222 222332322222222
Q ss_pred HHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEec
Q psy1119 854 TEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFS 917 (1392)
Q Consensus 854 ~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~S 917 (1392)
.+...|.||-.||..+. ..+|.+++ +..|+.-...+.+...+.+++..+++.+|
T Consensus 77 ----~~~~advViitaG~~~~---pg~~r~dl---~~~N~~i~~~~~~~i~k~a~~~~~vivvs 130 (154)
T d1y7ta1 77 ----AFKDADYALLVGAAPRK---AGMERRDL---LQVNGKIFTEQGRALAEVAKKDVKVLVVG 130 (154)
T ss_dssp ----HTTTCSEEEECCCCCCC---TTCCHHHH---HHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred ----hcccccEEEeecCcCCC---CCCcHHHH---HHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 23478999999998654 56777665 33444444445555555554444555543
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.45 E-value=4.6 Score=38.74 Aligned_cols=101 Identities=16% Similarity=0.210 Sum_probs=69.4
Q ss_pred HHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHH
Q psy1119 554 VYAMFIC-GQMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMK 632 (1392)
Q Consensus 554 ~~aL~~~-a~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~ 632 (1392)
+-++.+. ..+-.|.+|.|. |.|-||....+.++.+||+|+++...+-+.-.+. +.++. + ..+.+.
T Consensus 11 ~~~~~r~t~~~l~Gk~v~V~-GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~--~dG~~---v-----~~~~~a--- 76 (163)
T d1li4a1 11 IDGIKRATDVMIAGKVAVVA-GYGDVGKGCAQALRGFGARVIITEIDPINALQAA--MEGYE---V-----TTMDEA--- 76 (163)
T ss_dssp HHHHHHHHCCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH--HTTCE---E-----CCHHHH---
T ss_pred HHHHHHHhCceecCCEEEEe-ccccccHHHHHHHHhCCCeeEeeecccchhHHhh--cCceE---e-----eehhhh---
Confidence 4444443 334589999999 6799999999999999999999998875543322 21111 1 122222
Q ss_pred HcCCCcceEEEecCchh--HHHHHHhcccCCeEEEEEcccc
Q psy1119 633 RTKGRGVDLVLNSLAEE--KLQASVRCLAQGGRFLEIGKFD 671 (1392)
Q Consensus 633 ~T~g~GvDvVlds~~~~--~l~~s~~~La~~Gr~v~iG~~~ 671 (1392)
. .-.|+|+-+.+.. .-...++.++++.-+..+|-++
T Consensus 77 -~--~~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd 114 (163)
T d1li4a1 77 -C--QEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFD 114 (163)
T ss_dssp -T--TTCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSSST
T ss_pred -h--hhccEEEecCCCccchhHHHHHhccCCeEEEEecccc
Confidence 2 2469999888753 2357788999999988888654
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=81.17 E-value=1.4 Score=47.92 Aligned_cols=104 Identities=20% Similarity=0.126 Sum_probs=60.3
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHH-cCCCcc
Q psy1119 562 QMQKGESILIHAGSGGVGQAAINLARYMDA-EIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKR-TKGRGV 639 (1392)
Q Consensus 562 ~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga-~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~-T~g~Gv 639 (1392)
.+++|++||=.+ .|.|..++.+|+. || +|+++..+++..+.+++.+-..+...-+.....+..+.+... -.+..+
T Consensus 142 ~~~~g~~VLDl~--~g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~f 218 (324)
T d2as0a2 142 WVQPGDRVLDVF--TYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKF 218 (324)
T ss_dssp GCCTTCEEEETT--CTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hcCCCCeeeccc--Ccccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCC
Confidence 467899998542 2444445555544 66 799999999888887664311222111111122322332222 235679
Q ss_pred eEEEe-c--Cc-------------hhHHHHHHhcccCCeEEEEEc
Q psy1119 640 DLVLN-S--LA-------------EEKLQASVRCLAQGGRFLEIG 668 (1392)
Q Consensus 640 DvVld-s--~~-------------~~~l~~s~~~La~~Gr~v~iG 668 (1392)
|+|+- . .+ .+.+..++++|+|||+++...
T Consensus 219 D~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s 263 (324)
T d2as0a2 219 DIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCS 263 (324)
T ss_dssp EEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 99874 2 11 124677889999999998764
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=80.68 E-value=1.3 Score=44.13 Aligned_cols=97 Identities=19% Similarity=0.221 Sum_probs=60.5
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCce-eeCCCccHHHHHHHHcCCCcce
Q psy1119 562 QMQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENI-GNSRDTSFEQLVMKRTKGRGVD 640 (1392)
Q Consensus 562 ~l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i-~~s~~~~~~~~i~~~T~g~GvD 640 (1392)
.+++| +||=. || |.|..+..+|+ .|++|+++.-+++-.+.+++.....+.+.+ +...+. ........+|
T Consensus 28 ~~~~g-rvLDi-Gc-G~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~------~~~~~~~~fD 97 (198)
T d2i6ga1 28 VVAPG-RTLDL-GC-GNGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDL------NTLTFDGEYD 97 (198)
T ss_dssp TSCSC-EEEEE-TC-TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCT------TTCCCCCCEE
T ss_pred cCCCC-cEEEE-CC-CCCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheec------cccccccccc
Confidence 34555 88888 43 47888888886 599999999998877776654322232322 111111 0111224689
Q ss_pred EEEecCc-----h----hHHHHHHhcccCCeEEEEEc
Q psy1119 641 LVLNSLA-----E----EKLQASVRCLAQGGRFLEIG 668 (1392)
Q Consensus 641 vVlds~~-----~----~~l~~s~~~La~~Gr~v~iG 668 (1392)
+|+.... . ..+....++|+++|+++...
T Consensus 98 ~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 134 (198)
T d2i6ga1 98 FILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVA 134 (198)
T ss_dssp EEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 9986321 1 25677788999999988754
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=80.64 E-value=6.2 Score=38.34 Aligned_cols=115 Identities=10% Similarity=-0.066 Sum_probs=64.3
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCC---c---eEEEecCCCcccHHHHHHHHHHhcC---CceEEEEeccCCCHHHHHHH
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGA---R---KLVLTSRSGVKNGYQALRIKIWKSY---DVQVLISTDDITTEAGVVNL 852 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GA---r---~lvl~sRs~~~~~~~~~~~~~l~~~---G~~v~~~~~Dv~~~~~v~~l 852 (1392)
-.+.||||+|.+|..++-+|+.... . .+.++...... +..+....++... ...-..... +..
T Consensus 25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~-~~l~g~~mdl~d~a~~~~~~~~~~~---~~~----- 95 (175)
T d7mdha1 25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSF-QALEGVAMELEDSLYPLLREVSIGI---DPY----- 95 (175)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGH-HHHHHHHHHHHTTTCTTEEEEEEES---CHH-----
T ss_pred cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCcccc-chhcchhhhhcccccccccCccccc---cch-----
Confidence 3589999999999999999987532 1 34455544321 1122222233322 222222222 211
Q ss_pred HHHHhhcCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEe
Q psy1119 853 LTEANKLGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVF 916 (1392)
Q Consensus 853 ~~~~~~~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~ 916 (1392)
+.+...|.||-.||..+. ..||.+++ +..|+.-...+.+...+++++ +.+|++
T Consensus 96 ----~~~~~aDvVvi~ag~~rk---pg~tR~Dl---l~~N~~I~k~~~~~i~~~a~~-~~~vlv 148 (175)
T d7mdha1 96 ----EVFEDVDWALLIGAKPRG---PGMERAAL---LDINGQIFADQGKALNAVASK-NVKVLV 148 (175)
T ss_dssp ----HHTTTCSEEEECCCCCCC---TTCCHHHH---HHHHHHHHHHHHHHHHHHSCT-TCEEEE
T ss_pred ----hhccCCceEEEeeccCCC---CCCcHHHH---HHHHHHHHHHHHHHHHhhCCC-CcEEEE
Confidence 234579999999998653 45666654 444555555666666666543 444444
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=80.55 E-value=1.1 Score=47.02 Aligned_cols=32 Identities=22% Similarity=0.295 Sum_probs=29.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q psy1119 568 SILIHAGSGGVGQAAINLARYMDAEIFTTVGT 599 (1392)
Q Consensus 568 tVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s 599 (1392)
+|||.||+|-+|..++...+..|.+|+++.+.
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~ 34 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQ 34 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeech
Confidence 59999999999999999999999999998753
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=80.50 E-value=4.3 Score=41.24 Aligned_cols=101 Identities=14% Similarity=0.147 Sum_probs=56.7
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHH---HHHHcCC----EEEEEecChhhHHHHHHHCCC-----CCcCce-eeCCCccHH
Q psy1119 561 GQMQKGESILIHAGSGGVGQAAIN---LARYMDA----EIFTTVGTPEKREFIRKTFPF-----IKEENI-GNSRDTSFE 627 (1392)
Q Consensus 561 a~l~~GetVLI~ga~GgVG~aaIq---lA~~~Ga----~V~~tv~s~ek~~~l~~~~p~-----l~~~~i-~~s~~~~~~ 627 (1392)
..+++|++||..|..+ |..+.- ++...|+ +|+++...++-.++.++.... .+..++ +...|..
T Consensus 76 ~~l~~g~~VLeIGtGs--GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~-- 151 (223)
T d1r18a_ 76 DHLKPGARILDVGSGS--GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGR-- 151 (223)
T ss_dssp TTCCTTCEEEEESCTT--SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGG--
T ss_pred hccCCCCeEEEecCCC--CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccc--
Confidence 4789999999996533 444333 4445553 899988877655555432100 011111 1111110
Q ss_pred HHHHHHcCCCcceEEEecCch-hHHHHHHhcccCCeEEEE-Ec
Q psy1119 628 QLVMKRTKGRGVDLVLNSLAE-EKLQASVRCLAQGGRFLE-IG 668 (1392)
Q Consensus 628 ~~i~~~T~g~GvDvVlds~~~-~~l~~s~~~La~~Gr~v~-iG 668 (1392)
+. ......+|.|+-+.+- +.-+..++.|++||++|. +|
T Consensus 152 ~~---~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~pvg 191 (223)
T d1r18a_ 152 KG---YPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVG 191 (223)
T ss_dssp GC---CGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEES
T ss_pred cc---cccccceeeEEEEeechhchHHHHHhcCCCcEEEEEEe
Confidence 00 0112369988765543 334566789999999987 44
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=80.44 E-value=0.68 Score=48.27 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=30.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q psy1119 568 SILIHAGSGGVGQAAINLARYMDAEIFTTVGTPE 601 (1392)
Q Consensus 568 tVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~e 601 (1392)
.|||.||++|+|.+..+.....|++|+.+..+++
T Consensus 3 VvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~ 36 (257)
T d1fjha_ 3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA 36 (257)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence 5899999999999999998999999999887643
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.39 E-value=1.9 Score=39.65 Aligned_cols=54 Identities=22% Similarity=0.241 Sum_probs=40.0
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCc-----ccHHHHHHHHHHhcCCceEE
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGV-----KNGYQALRIKIWKSYDVQVL 837 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~-----~~~~~~~~~~~l~~~G~~v~ 837 (1392)
+..+|+|| |-+|.++|..|++.|.+ |.++.|+.. +....+...+.+++.|++++
T Consensus 23 k~vvIvGg-G~iG~E~A~~l~~~G~~-Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~Gv~i~ 81 (125)
T d3grsa2 23 GRSVIVGA-GYIAVEMAGILSALGSK-TSLMIRHDKVLRSFDSMISTNCTEELENAGVEVL 81 (125)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCE-EEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEEcC-CccHHHHHHHHhcCCcE-EEEEeeccccccchhhHHHHHHHHHHHHCCCEEE
Confidence 57788866 57999999999999997 777777642 23345556667788887764
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=80.22 E-value=6 Score=37.28 Aligned_cols=117 Identities=18% Similarity=0.082 Sum_probs=64.8
Q ss_pred CCeEEEEcCcchHHHHHHHHHHHhC-CceEEEecCCCcccHHHHHHHHHHh-cCCceEEEEeccCCCHHHHHHHHHHHhh
Q psy1119 781 NKSYIICGGLGGFGLELADWLVLRG-ARKLVLTSRSGVKNGYQALRIKIWK-SYDVQVLISTDDITTEAGVVNLLTEANK 858 (1392)
Q Consensus 781 ~~~ylItGG~gGiG~~lA~~La~~G-Ar~lvl~sRs~~~~~~~~~~~~~l~-~~G~~v~~~~~Dv~~~~~v~~l~~~~~~ 858 (1392)
++..-|+|+ |.+|..+|..|+.+| +..|+|+.+..........-+.... ..+..+.+...|. +.
T Consensus 6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------------~~ 71 (148)
T d1ldna1 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------------DD 71 (148)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------------GG
T ss_pred CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------------HH
Confidence 456777785 999999999999998 5679999987533222211121111 1233344444432 12
Q ss_pred cCCccEEEECcccCCCccccCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecc
Q psy1119 859 LGPVDGIFNLAVVLKDALFENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSS 918 (1392)
Q Consensus 859 ~g~I~gvi~~Agv~~d~~~~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS 918 (1392)
+..-|.||.+||..+... ++..+ .+..|+.-...+.+...+++++ ..|+++|-
T Consensus 72 l~daDvvvitag~~~~~~---~~R~d---l~~~N~~i~~~i~~~i~~~~p~-a~~ivvtN 124 (148)
T d1ldna1 72 CRDADLVVICAGANQKPG---ETRLD---LVDKNIAIFRSIVESVMASGFQ-GLFLVATN 124 (148)
T ss_dssp TTTCSEEEECCSCCCCTT---TCSGG---GHHHHHHHHHHHHHHHHHHTCC-SEEEECSS
T ss_pred hccceeEEEecccccccC---cchhH---HHHHHHHHHHHHHHHHHhhCCC-ceEEEecC
Confidence 335799999999865432 22221 2223333333344444455543 56666543
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=80.14 E-value=4.5 Score=40.00 Aligned_cols=105 Identities=16% Similarity=0.152 Sum_probs=63.5
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHHHHCCCCCcC-ceeeCCCccHHHHHHHHcCCCc
Q psy1119 561 GQMQKGESILIHAGSGGVGQAAINLARY-MDAEIFTTVGTPEKREFIRKTFPFIKEE-NIGNSRDTSFEQLVMKRTKGRG 638 (1392)
Q Consensus 561 a~l~~GetVLI~ga~GgVG~aaIqlA~~-~Ga~V~~tv~s~ek~~~l~~~~p~l~~~-~i~~s~~~~~~~~i~~~T~g~G 638 (1392)
..+++|+.+ |-.++|+ |--+-.+++. -+++|++.+.+++-.+.+++.+...+.. .+++..-.++.. +....+-..
T Consensus 19 l~~~~~~~~-lD~t~G~-Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~-~~~~~~~~~ 95 (192)
T d1m6ya2 19 LKPEDEKII-LDCTVGE-GGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF-LLKTLGIEK 95 (192)
T ss_dssp HCCCTTCEE-EETTCTT-SHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH-HHHHTTCSC
T ss_pred hCCCCCCEE-EEecCCC-cHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHH-HHHHcCCCC
Confidence 357888866 5544343 4334444444 4789999999999888888765333322 234433333333 333333457
Q ss_pred ceEEEecCc----------------hhHHHHHHhcccCCeEEEEEc
Q psy1119 639 VDLVLNSLA----------------EEKLQASVRCLAQGGRFLEIG 668 (1392)
Q Consensus 639 vDvVlds~~----------------~~~l~~s~~~La~~Gr~v~iG 668 (1392)
||.|+=-+| .+.+..+.+.|+++|+++.+.
T Consensus 96 vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~ 141 (192)
T d1m6ya2 96 VDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVIS 141 (192)
T ss_dssp EEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEE
T ss_pred cceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeec
Confidence 988753222 135677888999999988664
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=80.11 E-value=4.9 Score=38.08 Aligned_cols=120 Identities=17% Similarity=0.110 Sum_probs=66.5
Q ss_pred CeEEEEcCcchHHHHHHHHHHHhCCceEEEecCCCcccHHHHHHHHHHh-cCCceEEEEeccCCCHHHHHHHHHHHhhcC
Q psy1119 782 KSYIICGGLGGFGLELADWLVLRGARKLVLTSRSGVKNGYQALRIKIWK-SYDVQVLISTDDITTEAGVVNLLTEANKLG 860 (1392)
Q Consensus 782 ~~ylItGG~gGiG~~lA~~La~~GAr~lvl~sRs~~~~~~~~~~~~~l~-~~G~~v~~~~~Dv~~~~~v~~l~~~~~~~g 860 (1392)
...-|+| +|++|..+|..|+.++...|+|+.++.........-+.... -.+.+..+...+ +. +.+.
T Consensus 4 ~KI~IIG-aG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----------~~~~ 70 (150)
T d1t2da1 4 AKIVLVG-SGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----------DDLA 70 (150)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----------GGGT
T ss_pred CeEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----------cccC
Confidence 4566777 59999999999999999999999987643332222121111 123333333322 11 2234
Q ss_pred CccEEEECcccCCCccc--cCCCHHHHHHHHhhHhHHHHHHHHHHhhhCCCCCeEEEecc
Q psy1119 861 PVDGIFNLAVVLKDALF--ENQTPEDFNASLGPKANATKYFDKYSRTMCPTLGQFVVFSS 918 (1392)
Q Consensus 861 ~I~gvi~~Agv~~d~~~--~~~t~e~~~~~~~~kv~g~~~L~~~~~~~~~~l~~fV~~SS 918 (1392)
.-|.||.+||..+..-- .+++..+ .+..|+.-...+.+...+.++ ...|+++|-
T Consensus 71 ~advvvitag~~~~~g~~~~~~~R~~---l~~~N~~iv~~i~~~i~~~~p-~aivivvtN 126 (150)
T d1t2da1 71 GADVVIVTAGFTKAPGKSDKEWNRDD---LLPLNNKIMIEIGGHIKKNCP-NAFIIVVTN 126 (150)
T ss_dssp TCSEEEECCSCSSCTTCCSTTCCGGG---GHHHHHHHHHHHHHHHHHHCT-TSEEEECSS
T ss_pred CCcEEEEecccccCCCCCccccchhH---HHHHHHHHHHHHHHHHHhcCC-CeEEEEecC
Confidence 68999999997543211 1222322 233344444445455555554 356666553
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=80.09 E-value=0.63 Score=49.82 Aligned_cols=101 Identities=17% Similarity=0.117 Sum_probs=61.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCce---eeCCCccHHHHHHHHcCCCcc
Q psy1119 563 MQKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENI---GNSRDTSFEQLVMKRTKGRGV 639 (1392)
Q Consensus 563 l~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i---~~s~~~~~~~~i~~~T~g~Gv 639 (1392)
.+.+.+||=.|. |.|..++.+|+. |++|+++.-|++-.+.+++.....+.... .+..+.++...-...-.+.++
T Consensus 54 ~~~~~~vLD~Gc--G~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 130 (292)
T d1xvaa_ 54 QHGCHRVLDVAC--GTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGF 130 (292)
T ss_dssp HTTCCEEEESSC--TTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCE
T ss_pred hcCCCEEEEecC--CCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccccCCCCCc
Confidence 346788988743 557788888875 99999999998877666553211111100 001111221111222334679
Q ss_pred eEEEecC---ch------------hHHHHHHhcccCCeEEEE
Q psy1119 640 DLVLNSL---AE------------EKLQASVRCLAQGGRFLE 666 (1392)
Q Consensus 640 DvVlds~---~~------------~~l~~s~~~La~~Gr~v~ 666 (1392)
|.|+... .- ..++...+.|+|||+++.
T Consensus 131 d~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 172 (292)
T d1xvaa_ 131 DAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI 172 (292)
T ss_dssp EEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred eEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence 9988532 10 257888899999999885
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=80.03 E-value=1.7 Score=43.28 Aligned_cols=90 Identities=20% Similarity=0.158 Sum_probs=59.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHCCCCCcCceeeCCCccHHHHHHHHcCCCcceEEE
Q psy1119 564 QKGESILIHAGSGGVGQAAINLARYMDAEIFTTVGTPEKREFIRKTFPFIKEENIGNSRDTSFEQLVMKRTKGRGVDLVL 643 (1392)
Q Consensus 564 ~~GetVLI~ga~GgVG~aaIqlA~~~Ga~V~~tv~s~ek~~~l~~~~p~l~~~~i~~s~~~~~~~~i~~~T~g~GvDvVl 643 (1392)
-.|.+|.|. |.|.||+...++++..|++|++......+... ... +. . ...++.+.+. ..|+|.
T Consensus 47 L~gktvgIi-G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~-~~~----~~---~--~~~~l~~ll~------~sD~i~ 109 (193)
T d1mx3a1 47 IRGETLGII-GLGRVGQAVALRAKAFGFNVLFYDPYLSDGVE-RAL----GL---Q--RVSTLQDLLF------HSDCVT 109 (193)
T ss_dssp CTTCEEEEE-CCSHHHHHHHHHHHTTTCEEEEECTTSCTTHH-HHH----TC---E--ECSSHHHHHH------HCSEEE
T ss_pred eeCceEEEe-ccccccccceeeeeccccceeeccCcccccch-hhh----cc---c--cccchhhccc------cCCEEE
Confidence 368899999 66999999999999999999988764332211 111 11 0 1123333332 358887
Q ss_pred ecCch--h---H-HHHHHhcccCCeEEEEEccc
Q psy1119 644 NSLAE--E---K-LQASVRCLAQGGRFLEIGKF 670 (1392)
Q Consensus 644 ds~~~--~---~-l~~s~~~La~~Gr~v~iG~~ 670 (1392)
-++.. + . -...++.++++..+|.++..
T Consensus 110 ~~~plt~~T~~li~~~~l~~mk~~a~lIN~sRG 142 (193)
T d1mx3a1 110 LHCGLNEHNHHLINDFTVKQMRQGAFLVNTARG 142 (193)
T ss_dssp ECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCT
T ss_pred EeecccccchhhhhHHHHhccCCCCeEEecCCc
Confidence 75542 2 1 24667899999999988864
|