Diaphorina citri psyllid: psy11223

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190--
MLQYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHPGKSKIVGAKGGENGEPLVL
cccEEEEcccccHHHHHHHHHHHcccccccEEEEECcccccccccHHHHHHHHHHHHHHHHHcccEEEcccccccccccHHHHHHHHHHcccccEEEEECcccccccccccccccccccccccccccccccccccccccEEEEEEccccccccHHHHHHHHHHHHHHHccccccccCEEEEEcccccccccc
MLQYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYIS********S*IVGAKGGENGEPLVL
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MLQYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHPGKSKIVGAKGGENGEPLVL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Transient receptor potential cation channel trpm Calcium channel mediating constitutive calcium ion entry.confidentA8DYE2
Transient receptor potential channel Required for initiation and continuation of postembryonic mitotic cell divisions of gonadal cells Z1 and Z4. Zygotic expression is necessary for hermaphrodite fertility. May be a cation channel.confidentQ93971
Transient receptor potential cation channel subfamily M member 3 Calcium channel mediating constitutive calcium ion entry. Its activity is increased by reduction in extracellular osmolarity, by store depletion and muscarinic receptor activation.confidentQ9HCF6

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0065007 [BP]biological regulationprobableGO:0008150
GO:0005261 [MF]cation channel activityprobableGO:0022891, GO:0022892, GO:0005215, GO:0005216, GO:0008324, GO:0015075, GO:0022857, GO:0015267, GO:0003674, GO:0022803, GO:0022838
GO:0042995 [CC]cell projectionprobableGO:0005575, GO:0044464, GO:0005623
GO:0022890 [MF]inorganic cation transmembrane transporter activityprobableGO:0022891, GO:0022892, GO:0005215, GO:0008324, GO:0015075, GO:0022857, GO:0003674
GO:0050896 [BP]response to stimulusprobableGO:0008150
GO:0046873 [MF]metal ion transmembrane transporter activityprobableGO:0022891, GO:0022892, GO:0005215, GO:0008324, GO:0015075, GO:0022857, GO:0003674
GO:0035841 [CC]new growing cell tipprobableGO:0060187, GO:0051286, GO:0030427, GO:0044464, GO:0005623, GO:0005575, GO:0035838
GO:0070588 [BP]calcium ion transmembrane transportprobableGO:0009987, GO:0070838, GO:0006812, GO:0006811, GO:0006810, GO:0044763, GO:0006816, GO:0051179, GO:0008150, GO:0034220, GO:0044765, GO:0030001, GO:0072511, GO:0051234, GO:0055085, GO:0044699
GO:0044459 [CC]plasma membrane partprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2IZ6, chain A
Confidence level:probable
Coverage over the Query: 28-103
View the alignment between query and template
View the model in PyMOL