Psyllid ID: psy11223

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190--
Protein Sequence
MLQYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHPGKSKIVGAKGGENGEPLVL
Secondary Structure (PSIPRED)
cccEEEEcccccHHHHHHHHHHHcccccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHcccEEEcccccccccccHHHHHHHHHHcccccEEEEEEcccccccccccccccccccccccccccccccccccccccEEEEEEccccccccHHHHHHHHHHHHHHHccccccccEEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEccccHHHHHHHHHHHHccccccEEEEEccccccccccHHHHHHHHHcHHHHHHccccEEEEcccccHHHHHHHHHHHHccccccccEEEEEcccccEEEccHHccccccEEEEEEcccccccEEEEcccccEEEEEEccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEcccccEEEEc
Coil and Loop (DISEMBL)
mlqyvrlsydtrpENILQLFTREWSLELPKLLITVqggkanfelQPKLKKVLRKGLLKAAKTTgawvftggtntgvtRQVGDALLMERSQRSGRVVsigiapwgivennhelighnkdvpyhsissprskfavlNNRHAYFLLVdngtagkygAEIILRRKLEKYIsnqklhpgkskivgakggengeplvl
Flexible Loop (DISEMBL)
mlqyvrlsydtrpenILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAkttgawvftggtntgvtRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLlvdngtagkYGAEIILRRKLEKyisnqklhpgkskivgakggengeplvl
Low Complexity Region (SEG)
MLQYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPklkkvlrkgllkaakTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHPGKSKIVGAKGGENGEPLVL
Disordered region (IsUnstruct)
***YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYIS*************************
Disordered Region (DISOPRED)
MLQYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDA**********RVVSIGIAPWGIVENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYIS********S*IVGAKGGENGEPLVL
Disordered Region (DISEMBL)
MLQYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHPGKSKIVGAKGGENGEPLVL
Disordered Region (DISPRO)
MLQYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHPGKSKIVGAKGGENGEPLVL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLQYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHPGKSKIVGAKGGENGEPLVL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	192	2.2.26 [Sep-21-2011]
A8DYE2	2023	Transient receptor potent	yes	N/A	0.890	0.084	0.842	2e-83
Q9HCF6	1732	Transient receptor potent	yes	N/A	0.880	0.097	0.627	4e-59
Q7Z4N2	1603	Transient receptor potent	no	N/A	0.880	0.105	0.603	1e-56
Q96QT4	1865	Transient receptor potent	no	N/A	0.885	0.091	0.576	5e-56
Q925B3	1862	Transient receptor potent	no	N/A	0.885	0.091	0.576	5e-56
Q2TV84	1622	Transient receptor potent	no	N/A	0.880	0.104	0.591	5e-56
Q923J1	1863	Transient receptor potent	no	N/A	0.885	0.091	0.576	5e-56
Q2WEA5	1628	Transient receptor potent	no	N/A	0.880	0.103	0.585	7e-56
Q93971	2032	Transient receptor potent	yes	N/A	0.911	0.086	0.536	1e-52
Q9BX84	2022	Transient receptor potent	no	N/A	0.885	0.084	0.488	7e-47

>sp|A8DYE2|TRPCG_DROME Transient receptor potential cation channel trpm OS=Drosophila melanogaster GN=trpm PE=1 SV=1

 Score =  308 bits (788), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 144/171 (84%), Positives = 160/171 (93%)

Query: 3   QYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT 62
           QYVRLS+DTRPE ++QLFT+EW+LELPKLLITVQGGKANF+LQ KLKK +RKGLLKAAKT
Sbjct: 193 QYVRLSFDTRPELLVQLFTKEWNLELPKLLITVQGGKANFDLQAKLKKEIRKGLLKAAKT 252

Query: 63  TGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYH 122
           TGAW+FTGGTNTGVT+QVGDALL+E  QR+GRVVSIGIAPWGIVE NHEL+GHN++VP H
Sbjct: 253 TGAWIFTGGTNTGVTKQVGDALLLEGQQRTGRVVSIGIAPWGIVERNHELLGHNREVPCH 312

Query: 123 SISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHP 173
           SISSPRSK AVLNNRHAYFLLVDNGT  KYGAE+ILRRKLEK+ISN KLHP
Sbjct: 313 SISSPRSKLAVLNNRHAYFLLVDNGTQAKYGAELILRRKLEKFISNLKLHP 363

Calcium channel mediating constitutive calcium ion entry.
Drosophila melanogaster (taxid: 7227)

>sp|Q9HCF6|TRPM3_HUMAN Transient receptor potential cation channel subfamily M member 3 OS=Homo sapiens GN=TRPM3 PE=2 SV=4

 Score =  227 bits (578), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 106/169 (62%), Positives = 134/169 (79%)

Query: 4   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 63
           YVR+S+DT+P+ +L L T+EW LELPKLLI+V GG  NFELQPKLK+V  KGL+KAA TT
Sbjct: 155 YVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTT 214

Query: 64  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHS 123
           GAW+FTGG NTGV R VGDAL    S+  G++ +IGIAPWGIVEN  +LIG +   PY +
Sbjct: 215 GAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGRDVVRPYQT 274

Query: 124 ISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLH 172
           +S+P SK  VLN+ H++F+L DNGT GKYGAE+ LRR+LEK+IS QK++
Sbjct: 275 MSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKIN 323

Calcium channel mediating constitutive calcium ion entry. Its activity is increased by reduction in extracellular osmolarity, by store depletion and muscarinic receptor activation.

Homo sapiens (taxid: 9606)

>sp|Q7Z4N2|TRPM1_HUMAN Transient receptor potential cation channel subfamily M member 1 OS=Homo sapiens GN=TRPM1 PE=1 SV=2

 Score =  219 bits (558), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 102/169 (60%), Positives = 131/169 (77%)

Query: 4   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 63
           Y+R+SYDT+P+++L L  ++W LELPKLLI+V GG  NFE+QPKLK+V  KGL+KAA TT
Sbjct: 72  YIRVSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLIKAAMTT 131

Query: 64  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHS 123
           GAW+FTGG +TGV   VGDAL    S+  GRV +IGIAPWGIVEN  +L+G +    Y +
Sbjct: 132 GAWIFTGGVSTGVISHVGDALKDHSSKSRGRVCAIGIAPWGIVENKEDLVGKDVTRVYQT 191

Query: 124 ISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLH 172
           +S+P SK +VLNN H +F+L DNGT GKYGAE+ LRR LEK+IS QK++
Sbjct: 192 MSNPLSKLSVLNNSHTHFILADNGTLGKYGAEVKLRRLLEKHISLQKIN 240

Cation channel essential for the depolarizing photoresponse of retinal ON bipolar cells. It is part of the GRM6 signaling cascade. May play a role in metastasis suppression (By similarity). May act as a spontaneously active, calcium-permeable plasma membrane channel.

Homo sapiens (taxid: 9606)

>sp|Q96QT4|TRPM7_HUMAN Transient receptor potential cation channel subfamily M member 7 OS=Homo sapiens GN=TRPM7 PE=1 SV=1

 Score =  217 bits (552), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 98/170 (57%), Positives = 133/170 (78%)

Query: 3   QYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT 62
           +YVRLSYDT+PE ILQL  +EW +ELPKL+I+V GG   FEL P++K++L KGL+KAA T
Sbjct: 107 KYVRLSYDTKPEVILQLLLKEWQMELPKLVISVHGGMQKFELHPRIKQLLGKGLIKAAVT 166

Query: 63  TGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYH 122
           TGAW+ TGG NTGV + VGDAL    S+ S ++ +IGIAPWG++EN ++L+G +   PY 
Sbjct: 167 TGAWILTGGVNTGVAKHVGDALKEHASRSSRKICTIGIAPWGVIENRNDLVGRDVVAPYQ 226

Query: 123 SISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLH 172
           ++ +P SK  VLNN H++F+LVD+GT GKYGAE+ LRR+LEK I+ Q++H
Sbjct: 227 TLLNPLSKLNVLNNLHSHFILVDDGTVGKYGAEVRLRRELEKTINQQRIH 276

Essential ion channel and serine/threonine-protein kinase. Divalent cation channel permeable to calcium and magnesium. Has a central role in magnesium ion homeostasis and in the regulation of anoxic neuronal cell death. The kinase activity is essential for the channel function. May be involved in a fundamental process that adjusts plasma membrane divalent cation fluxes according to the metabolic state of the cell. Phosphorylates annexin A1 (ANXA1).

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q925B3|TRPM7_RAT Transient receptor potential cation channel subfamily M member 7 OS=Rattus norvegicus GN=Trpm7 PE=1 SV=2

 Score =  216 bits (551), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 98/170 (57%), Positives = 133/170 (78%)

Query: 3   QYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT 62
           +YVRLSYDT+PE ILQL  +EW +ELPKL+I+V GG   FEL P++K++L KGL+KAA T
Sbjct: 107 KYVRLSYDTKPEIILQLLLKEWQMELPKLVISVHGGMQKFELHPRIKQLLGKGLIKAAVT 166

Query: 63  TGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYH 122
           TGAW+ TGG NTGV + VGDAL    S+ S ++ +IGIAPWG++EN ++L+G +   PY 
Sbjct: 167 TGAWILTGGVNTGVAKHVGDALKEHASRSSRKICTIGIAPWGVIENRNDLVGRDVVAPYQ 226

Query: 123 SISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLH 172
           ++ +P SK  VLNN H++F+LVD+GT GKYGAE+ LRR+LEK I+ Q++H
Sbjct: 227 TLLNPLSKLNVLNNLHSHFILVDDGTVGKYGAEVRLRRELEKTINQQRIH 276

Essential ion channel and serine/threonine-protein kinase. Divalent cation channel permeable to calcium and magnesium. Has a central role in magnesium ion homeostasis and in the regulation of anoxic neuronal cell death. The kinase activity is essential for the channel function. May be involved in a fundamental process that adjusts plasma membrane divalent cation fluxes according to the metabolic state of the cell. Phosphorylates annexin A1 (ANXA1).

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q2TV84|TRPM1_MOUSE Transient receptor potential cation channel subfamily M member 1 OS=Mus musculus GN=Trpm1 PE=2 SV=2

 Score =  216 bits (551), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 100/169 (59%), Positives = 132/169 (78%)

Query: 4   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 63
           Y+R+SYDT+P+++L L  ++W LELPKLLI+V GG  +FE+QPKLK+V  KGL+KAA TT
Sbjct: 118 YIRVSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQSFEMQPKLKQVFGKGLIKAAMTT 177

Query: 64  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHS 123
           GAW+FTGG +TGV   VGDAL    S+  GR+ +IGIAPWG+VEN  +LIG +    Y +
Sbjct: 178 GAWIFTGGVSTGVVSHVGDALKDHSSKSRGRLCAIGIAPWGMVENKEDLIGKDVTRVYQT 237

Query: 124 ISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLH 172
           +S+P SK +VLNN H +F+L DNGT GKYGAE+ LRR+LEK+IS QK++
Sbjct: 238 MSNPLSKLSVLNNSHTHFILADNGTLGKYGAEVKLRRQLEKHISLQKIN 286

Cation channel essential for the depolarizing photoresponse of retinal ON bipolar cells. It is part of the GRM6 signaling cascade. Calcium channel which may play a role in metastasis suppression. May act as a spontaneously active, calcium-permeable plasma membrane channel.

Mus musculus (taxid: 10090)

>sp|Q923J1|TRPM7_MOUSE Transient receptor potential cation channel subfamily M member 7 OS=Mus musculus GN=Trpm7 PE=1 SV=1

 Score =  216 bits (551), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 98/170 (57%), Positives = 133/170 (78%)

Query: 3   QYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT 62
           +YVRLSYDT+PE ILQL  +EW +ELPKL+I+V GG   FEL P++K++L KGL+KAA T
Sbjct: 107 KYVRLSYDTKPEIILQLLLKEWQMELPKLVISVHGGMQKFELHPRIKQLLGKGLIKAAVT 166

Query: 63  TGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYH 122
           TGAW+ TGG NTGV + VGDAL    S+ S ++ +IGIAPWG++EN ++L+G +   PY 
Sbjct: 167 TGAWILTGGVNTGVAKHVGDALKEHASRSSRKICTIGIAPWGVIENRNDLVGRDVVAPYQ 226

Query: 123 SISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLH 172
           ++ +P SK  VLNN H++F+LVD+GT GKYGAE+ LRR+LEK I+ Q++H
Sbjct: 227 TLLNPLSKLNVLNNLHSHFILVDDGTVGKYGAEVRLRRELEKTINQQRIH 276

Essential ion channel and serine/threonine-protein kinase. Divalent cation channel permeable to calcium and magnesium. Has a central role in magnesium ion homeostasis and in the regulation of anoxic neuronal cell death. The kinase activity is essential for the channel function. May be involved in a fundamental process that adjusts plasma membrane divalent cation fluxes according to the metabolic state of the cell. Phosphorylates annexin A1 (ANXA1).

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q2WEA5|TRPM1_RAT Transient receptor potential cation channel subfamily M member 1 OS=Rattus norvegicus GN=Trpm1 PE=2 SV=1

 Score =  216 bits (550), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 99/169 (58%), Positives = 132/169 (78%)

Query: 4   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 63
           Y+R+SYDT+P+++L L  ++W LELPKLLI+V GG  +FE+QPKLK+V  KGL+KAA TT
Sbjct: 118 YIRVSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQSFEMQPKLKQVFGKGLIKAAMTT 177

Query: 64  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHS 123
           GAW+FTGG +TGV   VGDAL    S+  GR+ +IGIAPWG+VEN  +L+G +    Y +
Sbjct: 178 GAWIFTGGVSTGVVSHVGDALKDHSSKSRGRLCAIGIAPWGMVENKEDLVGKDVTRVYQT 237

Query: 124 ISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLH 172
           +S+P SK +VLNN H +F+L DNGT GKYGAE+ LRR+LEK+IS QK++
Sbjct: 238 MSNPLSKLSVLNNSHTHFILADNGTLGKYGAEVKLRRQLEKHISLQKIN 286

Calcium channel which may play a role in metastasis suppression. May act as a spontaneously active, calcium-permeable plasma membrane channel.

Rattus norvegicus (taxid: 10116)

>sp|Q93971|TRPG_CAEEL Transient receptor potential channel OS=Caenorhabditis elegans GN=gon-2 PE=1 SV=4

 Score =  206 bits (523), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 95/177 (53%), Positives = 127/177 (71%), Gaps = 2/177 (1%)

Query: 3   QYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT 62
           QYVR+++DT P  I+ LF   W +  P+L+ITV GG +NF+LQPKL +V RKGLLKAA T
Sbjct: 393 QYVRVNFDTEPAYIMSLFEHVWQISPPRLIITVHGGTSNFDLQPKLARVFRKGLLKAAST 452

Query: 63  TGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYH 122
           TGAW+ T G +TGV + V  AL   +S +  ++V IGIAPWG+++   + IG +K VPY+
Sbjct: 453 TGAWIITSGCDTGVVKHVAAALEGAQSAQRNKIVCIGIAPWGLLKKREDFIGQDKTVPYY 512

Query: 123 SISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISN-QKLHPGKSKI 178
             SS + +F  LNNRH+YFLLVDNGT G+YGAE+ILR++LE YIS  QK+  G   +
Sbjct: 513 P-SSSKGRFTGLNNRHSYFLLVDNGTVGRYGAEVILRKRLEMYISQKQKIFGGTRSV 568

Required for initiation and continuation of postembryonic mitotic cell divisions of gonadal cells Z1 and Z4. Zygotic expression is necessary for hermaphrodite fertility. May be a cation channel.

Caenorhabditis elegans (taxid: 6239)

>sp|Q9BX84|TRPM6_HUMAN Transient receptor potential cation channel subfamily M member 6 OS=Homo sapiens GN=TRPM6 PE=1 SV=2

 Score =  186 bits (473), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 83/170 (48%), Positives = 121/170 (71%)

Query: 3   QYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT 62
           +Y+R SYDT+ +++L L  +EW +ELPKL+I+V GG  NF +  K K++  +GL+KAA+T
Sbjct: 110 KYIRTSYDTKLDHLLHLMLKEWKMELPKLVISVHGGIQNFTMPSKFKEIFSQGLVKAAET 169

Query: 63  TGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYH 122
           TGAW+ T G NTGV++ VGDAL    S    ++ ++GI PWG++EN  +LIG +    Y 
Sbjct: 170 TGAWIITEGINTGVSKHVGDALKSHSSHSLRKIWTVGIPPWGVIENQRDLIGKDVVCLYQ 229

Query: 123 SISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLH 172
           ++ +P SK   LN+ H++F+L D+GT GKYG E+ LRR LEKY+S QK+H
Sbjct: 230 TLDNPLSKLTTLNSMHSHFILSDDGTVGKYGNEMKLRRNLEKYLSLQKIH 279

Essential ion channel and serine/threonine-protein kinase. Crucial for magnesium homeostasis. Has an important role in epithelial magnesium transport and in the active magnesium absorption in the gut and kidney. Isoforms of the type M6-kinase lack the ion channel region.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	192
158286782	1908	AGAP006825-PA [Anopheles gambiae str. PE	0.890	0.089	0.894	1e-86
312381378	875	hypothetical protein AND_06336 [Anophele	0.973	0.213	0.819	1e-84
328713852	1532	PREDICTED: transient receptor potential	0.890	0.111	0.877	2e-84
170058433	243	conserved hypothetical protein [Culex qu	0.890	0.703	0.877	5e-84
328713847	1089	PREDICTED: transient receptor potential	0.890	0.157	0.877	5e-84
161077096	2023	trpm, isoform E [Drosophila melanogaster	0.890	0.084	0.842	9e-82
221330283	1928	trpm, isoform G [Drosophila melanogaster	0.890	0.088	0.842	1e-81
116007702	1921	trpm, isoform D [Drosophila melanogaster	0.890	0.089	0.842	1e-81
221330281	1942	trpm, isoform F [Drosophila melanogaster	0.890	0.088	0.842	1e-81
189239436	1605	PREDICTED: similar to AGAP006825-PA [Tri	0.890	0.106	0.801	2e-81

>gi|158286782|ref|XP_308919.3| AGAP006825-PA [Anopheles gambiae str. PEST] gi|157020632|gb|EAA04234.4| AGAP006825-PA [Anopheles gambiae str. PEST]

 Score =  324 bits (830), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 153/171 (89%), Positives = 163/171 (95%)

Query: 3   QYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT 62
           QYVRLSYDTRPE ++QLFTREW+LELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT
Sbjct: 93  QYVRLSYDTRPELLVQLFTREWNLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT 152

Query: 63  TGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYH 122
           TGAW+FTGGTNTGVT+QVGDALL+E  QRSGRVVSIGIAPWGIVE NHEL+GHN+DVP H
Sbjct: 153 TGAWIFTGGTNTGVTKQVGDALLLEGQQRSGRVVSIGIAPWGIVERNHELLGHNRDVPCH 212

Query: 123 SISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHP 173
           SISSPRSK AVLNNRHAYFLLVDNGT G+YGAE+ILRRKLEKYISNQKL P
Sbjct: 213 SISSPRSKLAVLNNRHAYFLLVDNGTQGRYGAELILRRKLEKYISNQKLQP 263

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312381378|gb|EFR27137.1| hypothetical protein AND_06336 [Anopheles darlingi]

 Score =  317 bits (813), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 154/188 (81%), Positives = 167/188 (88%), Gaps = 1/188 (0%)

Query: 2   LQYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAK 61
           L YVRLSYDTRPE ++QLFTREW+LELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAK
Sbjct: 128 LGYVRLSYDTRPELLVQLFTREWNLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAK 187

Query: 62  TTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPY 121
           TTGAW+FTGGTNTGVT+QVGDALL+E  QRSGRVVSIGIAPWGIVE NHEL+GHN+DVP 
Sbjct: 188 TTGAWIFTGGTNTGVTKQVGDALLLEGQQRSGRVVSIGIAPWGIVERNHELLGHNRDVPC 247

Query: 122 HSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHPGKSKIVGA 181
           HSISSPRSK AVLNNRHAYFLLVD+G+  +YGAE+ILRRKLEKYISNQKL P      G 
Sbjct: 248 HSISSPRSKLAVLNNRHAYFLLVDDGSQARYGAELILRRKLEKYISNQKLQPSTGN-SGR 306

Query: 182 KGGENGEP 189
              +NG P
Sbjct: 307 VDDDNGSP 314

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328713852|ref|XP_003245193.1| PREDICTED: transient receptor potential cation channel CG34123-like [Acyrthosiphon pisum]

 Score =  316 bits (810), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 151/172 (87%), Positives = 161/172 (93%), Gaps = 1/172 (0%)

Query: 3   QYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT 62
           QYVRLS+DTRPE IL LF REW LELPKLLIT+QGGKANFE+QPKLKKVLRKGLLKAAKT
Sbjct: 96  QYVRLSHDTRPETILHLFNREWGLELPKLLITIQGGKANFEIQPKLKKVLRKGLLKAAKT 155

Query: 63  TGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYH 122
           TGAWVFTGGTNTGVTRQVGDALL++ SQR GRVVSIGIAPWGI+ENNHELIGHNKDVPYH
Sbjct: 156 TGAWVFTGGTNTGVTRQVGDALLLD-SQRPGRVVSIGIAPWGIIENNHELIGHNKDVPYH 214

Query: 123 SISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHPG 174
           SISSPRSK AVLNNRH YFLLVD+GT+G+YGAEI LR+KLEKYIS QKLHP 
Sbjct: 215 SISSPRSKLAVLNNRHTYFLLVDDGTSGRYGAEIELRKKLEKYISIQKLHPS 266

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170058433|ref|XP_001864920.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167877552|gb|EDS40935.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  315 bits (808), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 150/171 (87%), Positives = 163/171 (95%)

Query: 3   QYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT 62
           QYVRLSYDTRPE ++QLFTREW+LELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT
Sbjct: 62  QYVRLSYDTRPELLVQLFTREWNLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT 121

Query: 63  TGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYH 122
           TGAW+FTGGTNTGVT+QVGDAL+++  QRSGRVVSIGIAPWGIVE NHEL+GHN+DVP H
Sbjct: 122 TGAWIFTGGTNTGVTKQVGDALILDGQQRSGRVVSIGIAPWGIVERNHELLGHNRDVPCH 181

Query: 123 SISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHP 173
           SISSPRSK AVLNNRHAYFLLVDNG+ G+YGAE+ILRRKLEKYISNQKL P
Sbjct: 182 SISSPRSKLAVLNNRHAYFLLVDNGSQGRYGAELILRRKLEKYISNQKLQP 232

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328713847|ref|XP_001950420.2| PREDICTED: transient receptor potential cation channel CG34123-like [Acyrthosiphon pisum]

 Score =  315 bits (807), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 151/172 (87%), Positives = 161/172 (93%), Gaps = 1/172 (0%)

Query: 3   QYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT 62
           QYVRLS+DTRPE IL LF REW LELPKLLIT+QGGKANFE+QPKLKKVLRKGLLKAAKT
Sbjct: 96  QYVRLSHDTRPETILHLFNREWGLELPKLLITIQGGKANFEIQPKLKKVLRKGLLKAAKT 155

Query: 63  TGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYH 122
           TGAWVFTGGTNTGVTRQVGDALL++ SQR GRVVSIGIAPWGI+ENNHELIGHNKDVPYH
Sbjct: 156 TGAWVFTGGTNTGVTRQVGDALLLD-SQRPGRVVSIGIAPWGIIENNHELIGHNKDVPYH 214

Query: 123 SISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHPG 174
           SISSPRSK AVLNNRH YFLLVD+GT+G+YGAEI LR+KLEKYIS QKLHP 
Sbjct: 215 SISSPRSKLAVLNNRHTYFLLVDDGTSGRYGAEIELRKKLEKYISIQKLHPS 266

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|161077096|ref|NP_001097320.1| trpm, isoform E [Drosophila melanogaster] gi|190410958|sp|A8DYE2.1|TRPCG_DROME RecName: Full=Transient receptor potential cation channel trpm gi|157400338|gb|ABV53803.1| trpm, isoform E [Drosophila melanogaster]

 Score =  308 bits (788), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 144/171 (84%), Positives = 160/171 (93%)

Query: 3   QYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT 62
           QYVRLS+DTRPE ++QLFT+EW+LELPKLLITVQGGKANF+LQ KLKK +RKGLLKAAKT
Sbjct: 193 QYVRLSFDTRPELLVQLFTKEWNLELPKLLITVQGGKANFDLQAKLKKEIRKGLLKAAKT 252

Query: 63  TGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYH 122
           TGAW+FTGGTNTGVT+QVGDALL+E  QR+GRVVSIGIAPWGIVE NHEL+GHN++VP H
Sbjct: 253 TGAWIFTGGTNTGVTKQVGDALLLEGQQRTGRVVSIGIAPWGIVERNHELLGHNREVPCH 312

Query: 123 SISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHP 173
           SISSPRSK AVLNNRHAYFLLVDNGT  KYGAE+ILRRKLEK+ISN KLHP
Sbjct: 313 SISSPRSKLAVLNNRHAYFLLVDNGTQAKYGAELILRRKLEKFISNLKLHP 363

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|221330283|ref|NP_001137673.1| trpm, isoform G [Drosophila melanogaster] gi|220902229|gb|ACL83127.1| trpm, isoform G [Drosophila melanogaster]

 Score =  307 bits (787), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 144/171 (84%), Positives = 160/171 (93%)

Query: 3   QYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT 62
           QYVRLS+DTRPE ++QLFT+EW+LELPKLLITVQGGKANF+LQ KLKK +RKGLLKAAKT
Sbjct: 98  QYVRLSFDTRPELLVQLFTKEWNLELPKLLITVQGGKANFDLQAKLKKEIRKGLLKAAKT 157

Query: 63  TGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYH 122
           TGAW+FTGGTNTGVT+QVGDALL+E  QR+GRVVSIGIAPWGIVE NHEL+GHN++VP H
Sbjct: 158 TGAWIFTGGTNTGVTKQVGDALLLEGQQRTGRVVSIGIAPWGIVERNHELLGHNREVPCH 217

Query: 123 SISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHP 173
           SISSPRSK AVLNNRHAYFLLVDNGT  KYGAE+ILRRKLEK+ISN KLHP
Sbjct: 218 SISSPRSKLAVLNNRHAYFLLVDNGTQAKYGAELILRRKLEKFISNLKLHP 268

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|116007702|ref|NP_001036549.1| trpm, isoform D [Drosophila melanogaster] gi|113194657|gb|ABI31097.1| trpm, isoform D [Drosophila melanogaster]

 Score =  307 bits (787), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 144/171 (84%), Positives = 160/171 (93%)

Query: 3   QYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT 62
           QYVRLS+DTRPE ++QLFT+EW+LELPKLLITVQGGKANF+LQ KLKK +RKGLLKAAKT
Sbjct: 91  QYVRLSFDTRPELLVQLFTKEWNLELPKLLITVQGGKANFDLQAKLKKEIRKGLLKAAKT 150

Query: 63  TGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYH 122
           TGAW+FTGGTNTGVT+QVGDALL+E  QR+GRVVSIGIAPWGIVE NHEL+GHN++VP H
Sbjct: 151 TGAWIFTGGTNTGVTKQVGDALLLEGQQRTGRVVSIGIAPWGIVERNHELLGHNREVPCH 210

Query: 123 SISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHP 173
           SISSPRSK AVLNNRHAYFLLVDNGT  KYGAE+ILRRKLEK+ISN KLHP
Sbjct: 211 SISSPRSKLAVLNNRHAYFLLVDNGTQAKYGAELILRRKLEKFISNLKLHP 261

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|221330281|ref|NP_001137672.1| trpm, isoform F [Drosophila melanogaster] gi|220902228|gb|ACL83126.1| trpm, isoform F [Drosophila melanogaster]

 Score =  307 bits (786), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 144/171 (84%), Positives = 160/171 (93%)

Query: 3   QYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT 62
           QYVRLS+DTRPE ++QLFT+EW+LELPKLLITVQGGKANF+LQ KLKK +RKGLLKAAKT
Sbjct: 91  QYVRLSFDTRPELLVQLFTKEWNLELPKLLITVQGGKANFDLQAKLKKEIRKGLLKAAKT 150

Query: 63  TGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYH 122
           TGAW+FTGGTNTGVT+QVGDALL+E  QR+GRVVSIGIAPWGIVE NHEL+GHN++VP H
Sbjct: 151 TGAWIFTGGTNTGVTKQVGDALLLEGQQRTGRVVSIGIAPWGIVERNHELLGHNREVPCH 210

Query: 123 SISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHP 173
           SISSPRSK AVLNNRHAYFLLVDNGT  KYGAE+ILRRKLEK+ISN KLHP
Sbjct: 211 SISSPRSKLAVLNNRHAYFLLVDNGTQAKYGAELILRRKLEKFISNLKLHP 261

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189239436|ref|XP_974857.2| PREDICTED: similar to AGAP006825-PA [Tribolium castaneum]

 Score =  306 bits (785), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 137/171 (80%), Positives = 163/171 (95%)

Query: 3   QYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKT 62
           QY+R+++DT+PE+++QL T+EW+LELPKLLI++QGGKANFELQPKLKKVLRKGLLKAA++
Sbjct: 58  QYIRVAHDTKPEHLMQLITKEWNLELPKLLISIQGGKANFELQPKLKKVLRKGLLKAARS 117

Query: 63  TGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYH 122
           TGAW+FTGGTNTGVT+ +GDALL+ERSQR+GRV ++GIAPWGIVENN ELIGHN +VPYH
Sbjct: 118 TGAWIFTGGTNTGVTKHIGDALLLERSQRTGRVNTLGIAPWGIVENNQELIGHNTEVPYH 177

Query: 123 SISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHP 173
           SISSPRSKFA LNNRHAYFLLVDNGT GKYGAEI+LRR+LEKYIS Q+L+P
Sbjct: 178 SISSPRSKFAALNNRHAYFLLVDNGTVGKYGAEIVLRRRLEKYISKQRLYP 228

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	192
UNIPROTKB|F1LQU7	958	Trpm3 "Protein Trpm3" [Rattus	0.880	0.176	0.568	6.8e-48
RGD|1304888	1292	Trpm3 "transient receptor pote	0.984	0.146	0.536	7.3e-48
ZFIN|ZDB-GENE-060531-95	1734	trpm3 "transient receptor pote	0.973	0.107	0.545	1e-47
UNIPROTKB|H7BYP1	1556	TRPM3 "Transient receptor pote	0.984	0.121	0.536	1.1e-47
UNIPROTKB|A2A3F3	1566	TRPM3 "Transient receptor pote	0.984	0.120	0.536	1.1e-47
UNIPROTKB|G5E9G1	1566	TRPM3 "Transient receptor pote	0.984	0.120	0.536	1.1e-47
UNIPROTKB|F1LQU6	1650	Trpm3 "Protein Trpm3" [Rattus	0.984	0.114	0.536	1.2e-47
UNIPROTKB|F1LN45	1660	Trpm3 "Protein Trpm3" [Rattus	0.984	0.113	0.536	1.2e-47
UNIPROTKB|F1LQU5	1660	Trpm3 "Protein Trpm3" [Rattus	0.984	0.113	0.536	1.2e-47
UNIPROTKB|F1PF68	1708	TRPM3 "Uncharacterized protein	0.984	0.110	0.536	1.2e-47

UNIPROTKB|F1LQU7 Trpm3 "Protein Trpm3" [Rattus norvegicus (taxid:10116)]

 Score = 509 (184.2 bits), Expect = 6.8e-48, P = 6.8e-48
 Identities = 96/169 (56%), Positives = 122/169 (72%)

Query:     4 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 63
             YVR+S+DT+P+ +L L T+EW LELPKLLI+V GG  NFELQP               TT
Sbjct:     2 YVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTT 61

Query:    64 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHS 123
             GAW+FTGG NTGV R VGDAL    S+  G++ +IGIAPWGIVEN  +LIG +   PY +
Sbjct:    62 GAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGRDVVRPYQT 121

Query:   124 ISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLH 172
             +S+P SK  VLN+ H++F+L DNGT GKYGAE+ LRR+LEK+IS QK++
Sbjct:   122 MSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKIN 170

GO:0005216 "ion channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1304888 Trpm3 "transient receptor potential cation channel, subfamily M, member 3" [Rattus norvegicus (taxid:10116)]

 Score = 512 (185.3 bits), Expect = 7.3e-48, P = 7.3e-48
 Identities = 104/194 (53%), Positives = 133/194 (68%)

Query:     4 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 63
             YVR+S+DT+P+ +L L T+EW LELPKLLI+V GG  NFELQP               TT
Sbjct:   110 YVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTT 169

Query:    64 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHS 123
             GAW+FTGG NTGV R VGDAL    S+  G++ +IGIAPWGIVEN  +LIG +   PY +
Sbjct:   170 GAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGRDVVRPYQT 229

Query:   124 ISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHP--GKSKIVGA 181
             +S+P SK  VLN+ H++F+L DNGT GKYGAE+ LRR+LEK+IS QK++   G+   V A
Sbjct:   230 MSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRIGQGVPVVA 289

Query:   182 ---KGGENGEPLVL 192
                +GG N   +VL
Sbjct:   290 LIVEGGPNVISIVL 303

GO:0005216 "ion channel activity" evidence=IEA

GO:0005261 "cation channel activity" evidence=ISO

GO:0006812 "cation transport" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-060531-95 trpm3 "transient receptor potential cation channel, subfamily M, member 3" [Danio rerio (taxid:7955)]

 Score = 513 (185.6 bits), Expect = 1.0e-47, P = 1.0e-47
 Identities = 107/196 (54%), Positives = 135/196 (68%)

Query:     4 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 63
             YVR+SYDT+P+ +L L T+EW LELPKLLI+V GG  NFELQP               TT
Sbjct:    95 YVRVSYDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTT 154

Query:    64 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDV--PY 121
             GAW+FTGG NTGV R VGDAL    S+  G++ +IGIAPWGIVEN  +L+G  KDV  PY
Sbjct:   155 GAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLVG--KDVVRPY 212

Query:   122 HSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHP--GKSKIV 179
              ++S+P SK  VLN+ H++F+L DNGT GKYGAE+ LRR+LEK+IS QK++   G+   V
Sbjct:   213 QTMSNPLSKLTVLNSLHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRIGQGVPV 272

Query:   180 GA---KGGENGEPLVL 192
              A   +GG N   +VL
Sbjct:   273 VALIVEGGPNVISIVL 288

GO:0006811 "ion transport" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|H7BYP1 TRPM3 "Transient receptor potential cation channel subfamily M member 3" [Homo sapiens (taxid:9606)]

 Score = 512 (185.3 bits), Expect = 1.1e-47, P = 1.1e-47
 Identities = 104/194 (53%), Positives = 133/194 (68%)

Query:     4 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 63
             YVR+S+DT+P+ +L L T+EW LELPKLLI+V GG  NFELQP               TT
Sbjct:     2 YVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTT 61

Query:    64 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHS 123
             GAW+FTGG NTGV R VGDAL    S+  G++ +IGIAPWGIVEN  +LIG +   PY +
Sbjct:    62 GAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGRDVVRPYQT 121

Query:   124 ISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHP--GKSKIVGA 181
             +S+P SK  VLN+ H++F+L DNGT GKYGAE+ LRR+LEK+IS QK++   G+   V A
Sbjct:   122 MSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRIGQGVPVVA 181

Query:   182 ---KGGENGEPLVL 192
                +GG N   +VL
Sbjct:   182 LIVEGGPNVISIVL 195

GO:0005216 "ion channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|A2A3F3 TRPM3 "Transient receptor potential cation channel subfamily M member 3" [Homo sapiens (taxid:9606)]

 Score = 512 (185.3 bits), Expect = 1.1e-47, P = 1.1e-47
 Identities = 104/194 (53%), Positives = 133/194 (68%)

Query:     4 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 63
             YVR+S+DT+P+ +L L T+EW LELPKLLI+V GG  NFELQP               TT
Sbjct:     2 YVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTT 61

Query:    64 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHS 123
             GAW+FTGG NTGV R VGDAL    S+  G++ +IGIAPWGIVEN  +LIG +   PY +
Sbjct:    62 GAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGRDVVRPYQT 121

Query:   124 ISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHP--GKSKIVGA 181
             +S+P SK  VLN+ H++F+L DNGT GKYGAE+ LRR+LEK+IS QK++   G+   V A
Sbjct:   122 MSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRIGQGVPVVA 181

Query:   182 ---KGGENGEPLVL 192
                +GG N   +VL
Sbjct:   182 LIVEGGPNVISIVL 195

GO:0005216 "ion channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|G5E9G1 TRPM3 "Transient receptor potential cation channel subfamily M member 3" [Homo sapiens (taxid:9606)]

 Score = 512 (185.3 bits), Expect = 1.1e-47, P = 1.1e-47
 Identities = 104/194 (53%), Positives = 133/194 (68%)

Query:     4 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 63
             YVR+S+DT+P+ +L L T+EW LELPKLLI+V GG  NFELQP               TT
Sbjct:     2 YVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTT 61

Query:    64 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHS 123
             GAW+FTGG NTGV R VGDAL    S+  G++ +IGIAPWGIVEN  +LIG +   PY +
Sbjct:    62 GAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGRDVVRPYQT 121

Query:   124 ISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHP--GKSKIVGA 181
             +S+P SK  VLN+ H++F+L DNGT GKYGAE+ LRR+LEK+IS QK++   G+   V A
Sbjct:   122 MSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRIGQGVPVVA 181

Query:   182 ---KGGENGEPLVL 192
                +GG N   +VL
Sbjct:   182 LIVEGGPNVISIVL 195

GO:0005216 "ion channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1LQU6 Trpm3 "Protein Trpm3" [Rattus norvegicus (taxid:10116)]

 Score = 512 (185.3 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 104/194 (53%), Positives = 133/194 (68%)

Query:     4 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 63
             YVR+S+DT+P+ +L L T+EW LELPKLLI+V GG  NFELQP               TT
Sbjct:    96 YVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTT 155

Query:    64 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHS 123
             GAW+FTGG NTGV R VGDAL    S+  G++ +IGIAPWGIVEN  +LIG +   PY +
Sbjct:   156 GAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGRDVVRPYQT 215

Query:   124 ISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHP--GKSKIVGA 181
             +S+P SK  VLN+ H++F+L DNGT GKYGAE+ LRR+LEK+IS QK++   G+   V A
Sbjct:   216 MSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRIGQGVPVVA 275

Query:   182 ---KGGENGEPLVL 192
                +GG N   +VL
Sbjct:   276 LIVEGGPNVISIVL 289

GO:0005216 "ion channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1LN45 Trpm3 "Protein Trpm3" [Rattus norvegicus (taxid:10116)]

 Score = 512 (185.3 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 104/194 (53%), Positives = 133/194 (68%)

Query:     4 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 63
             YVR+S+DT+P+ +L L T+EW LELPKLLI+V GG  NFELQP               TT
Sbjct:    96 YVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTT 155

Query:    64 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHS 123
             GAW+FTGG NTGV R VGDAL    S+  G++ +IGIAPWGIVEN  +LIG +   PY +
Sbjct:   156 GAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGRDVVRPYQT 215

Query:   124 ISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHP--GKSKIVGA 181
             +S+P SK  VLN+ H++F+L DNGT GKYGAE+ LRR+LEK+IS QK++   G+   V A
Sbjct:   216 MSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRIGQGVPVVA 275

Query:   182 ---KGGENGEPLVL 192
                +GG N   +VL
Sbjct:   276 LIVEGGPNVISIVL 289

GO:0005261 "cation channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1LQU5 Trpm3 "Protein Trpm3" [Rattus norvegicus (taxid:10116)]

 Score = 512 (185.3 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 104/194 (53%), Positives = 133/194 (68%)

Query:     4 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 63
             YVR+S+DT+P+ +L L T+EW LELPKLLI+V GG  NFELQP               TT
Sbjct:    96 YVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTT 155

Query:    64 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHS 123
             GAW+FTGG NTGV R VGDAL    S+  G++ +IGIAPWGIVEN  +LIG +   PY +
Sbjct:   156 GAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGRDVVRPYQT 215

Query:   124 ISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHP--GKSKIVGA 181
             +S+P SK  VLN+ H++F+L DNGT GKYGAE+ LRR+LEK+IS QK++   G+   V A
Sbjct:   216 MSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRIGQGVPVVA 275

Query:   182 ---KGGENGEPLVL 192
                +GG N   +VL
Sbjct:   276 LIVEGGPNVISIVL 289

GO:0005216 "ion channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1PF68 TRPM3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 512 (185.3 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 104/194 (53%), Positives = 133/194 (68%)

Query:     4 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 63
             YVR+S+DT+P+ +L L T+EW LELPKLLI+V GG  NFELQP               TT
Sbjct:   156 YVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTT 215

Query:    64 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIGHNKDVPYHS 123
             GAW+FTGG NTGV R VGDAL    S+  G++ +IGIAPWGIVEN  +LIG +   PY +
Sbjct:   216 GAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGRDVVRPYQT 275

Query:   124 ISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHP--GKSKIVGA 181
             +S+P SK  VLN+ H++F+L DNGT GKYGAE+ LRR+LEK+IS QK++   G+   V A
Sbjct:   276 MSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRIGQGVPVVA 335

Query:   182 ---KGGENGEPLVL 192
                +GG N   +VL
Sbjct:   336 LIVEGGPNVISIVL 349

GO:0016021 "integral to membrane" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q93971	TRPG_CAEEL	No assigned EC number	0.5367	0.9114	0.0861	yes	N/A
A8DYE2	TRPCG_DROME	No assigned EC number	0.8421	0.8906	0.0845	yes	N/A
Q9HCF6	TRPM3_HUMAN	No assigned EC number	0.6272	0.8802	0.0975	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	192
KOG3614|consensus	1381		100.0
TIGR00730	178	conserved hypothetical protein, DprA/Smf-related,	94.82
TIGR00725	159	conserved hypothetical protein, DprA/Smf-related,	93.77
COG1611	205	Predicted Rossmann fold nucleotide-binding protein	84.01
cd02189	446	delta_tubulin The tubulin superfamily includes fiv	81.63

>KOG3614|consensus

Probab=100.00  E-value=8.4e-66  Score=508.24  Aligned_cols=189  Identities=55%  Similarity=0.937  Sum_probs=181.7

Q ss_pred             cceEEeeCCCCHHHHHHHHHhhhCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHH
Q psy11223          2 LQYVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVG   81 (192)
Q Consensus         2 a~yiRls~dt~p~~i~~l~~~~W~l~~P~LVISV~GG~~~f~l~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG   81 (192)
                      |||||+|+||+|+.|++||+++|+|+.|+|||||+||++||+|+|||+++|||||+||||||||||||||+++|||||||
T Consensus        90 akyiR~S~dt~P~~i~hLm~k~W~l~~P~LvISV~GG~~nF~L~pkl~~~frkGLvkaAqtTGAWIiTsG~~tGv~khVg  169 (1381)
T KOG3614|consen   90 AKYIRVSYDTDPGAILHLMTKEWQLEVPKLVISVHGGLQNFELQPKLKSVFRKGLIKAAQTTGAWIITSGLDTGVMKHVG  169 (1381)
T ss_pred             ceeEEeCCCCChHHHHHHHHHHhCcCCCcEEEEEecCCCCccccHHHHHHHHHHHHHHHhhcCeEEEecCcccchHHHHH
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhcccCCC-ceeEEeeccccceeccccccCCCCCcccccccCCCCCcccccCCCcEEEEeeCCCCCCCChhHHHHH
Q psy11223         82 DALLMERSQRSG-RVVSIGIAPWGIVENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRR  160 (192)
Q Consensus        82 ~Av~d~~s~~~~-kv~~IGIApWG~V~~r~~Li~~~~~~p~~~~~~~~~~~~~Ld~nHshFlLVD~Gt~~~~G~e~~lR~  160 (192)
                      +|++||++.+++ ||++|||||||+|+|||+||+.+...+|+..+++.++...||+||||||||||||+|+||+|++||+
T Consensus       170 ~Al~dh~~~s~~~~ivaiGiApWGvv~nr~~lI~~d~~~~Y~~~~~~~~~L~~Ln~nhShFiLvDnGTvGkygae~~lR~  249 (1381)
T KOG3614|consen  170 SALRDHSLASSGGKIVAIGIAPWGIVKNRDDLIGGDFTVSYQTDDNPLNKLTILNNNHSHFILVDNGTVGKYGAETKLRL  249 (1381)
T ss_pred             HHHHhccchhccCceEEEeeccceeeechhhhccCCcceeeeecCCCCcceeeccCCCceeEEecCCccCccchHHHHHH
Confidence            999999876665 9999999999999999999998888888888888889999999999999999999999999999999


Q ss_pred             HHHHHHhccccCCCCceeeec-----CCCCCcccc
Q psy11223        161 KLEKYISNQKLHPGKSKIVGA-----KGGENGEPL  190 (192)
Q Consensus       161 ~LE~~is~~~~~~~~~~~v~~-----~~~~~~~~~  190 (192)
                      +||+|||+|+++.+..++|||     |||||++-.
T Consensus       250 ~LEk~Is~q~~~~~~~~~iPvvc~v~eGg~nti~~  284 (1381)
T KOG3614|consen  250 RLEKYISLQKINSGGTGKIPVVCLVLEGGPNTLAI  284 (1381)
T ss_pred             hchhhHhhhccCCCCCCccceEEEEecCCchHHHH
Confidence            999999999999988889999     999998744

>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2

Probab=94.82  E-value=0.13  Score=42.61  Aligned_cols=66  Identities=21%  Similarity=0.310  Sum_probs=46.0

Q ss_pred             EEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhcccCCCceeEEeeccccc
Q psy11223         32 LITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGI  105 (192)
Q Consensus        32 VISV~GG~~~f~l~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApWG~  105 (192)
                      .|+|.||++.-.-++ ..+.-++ |-++.-..|-=++|||-+.|+|+.+.+++++..    +  ..|||.|-..
T Consensus         2 ~i~V~~~s~~~~~~~-~~~~A~~-lG~~la~~g~~lV~GGg~~GlM~a~a~ga~~~g----G--~viGi~p~~l   67 (178)
T TIGR00730         2 TVCVYCGSSPGGNAA-YKELAAE-LGAYLAGQGWGLVYGGGRVGLMGAIADAAMENG----G--TAVGVNPSGL   67 (178)
T ss_pred             EEEEECcCCCCCCcH-HHHHHHH-HHHHHHHCCCEEEECCChHhHHHHHHHHHHhcC----C--eEEEecchhh
Confidence            589999987644333 3333333 444444458889999999999999999998753    2  3699998754

This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.

>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1

Probab=93.77  E-value=0.29  Score=39.58  Aligned_cols=63  Identities=27%  Similarity=0.344  Sum_probs=44.2

Q ss_pred             EEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhcccCCCceeEEeeccccc
Q psy11223         32 LITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGI  105 (192)
Q Consensus        32 VISV~GG~~~f~l~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApWG~  105 (192)
                      .|+|.|+.+   ..+...+.-++ |-+.....|.-|++|| ..|+|..+.++..+..    +  .+|||-|-+.
T Consensus         3 ~I~V~gss~---~~~~~~~~A~~-lg~~La~~g~~lv~Gg-~~GlM~a~a~ga~~~g----g--~viGVlp~~l   65 (159)
T TIGR00725         3 QIGVIGSSN---KSEELYEIAYR-LGKELAKKGHILINGG-RTGVMEAVSKGAREAG----G--LVVGILPDED   65 (159)
T ss_pred             EEEEEeCCC---CChHHHHHHHH-HHHHHHHCCCEEEcCC-chhHHHHHHHHHHHCC----C--eEEEECChhh
Confidence            589999987   25555555555 5555555687777755 4599999999997753    2  3589988654

This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.

>COG1611 Predicted Rossmann fold nucleotide-binding protein [General function prediction only]

Probab=84.01  E-value=4.9  Score=33.97  Aligned_cols=71  Identities=27%  Similarity=0.254  Sum_probs=47.0

Q ss_pred             CCeEEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhcccCCCceeEEeecccccee
Q psy11223         29 PKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVE  107 (192)
Q Consensus        29 P~LVISV~GG~~~f~l~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApWG~V~  107 (192)
                      .---++|.+|...-..+....+.-++ |-++.-.-|.-|+||| ..|||..+.+...+..      -..|||-|=....
T Consensus        13 ~~~~i~V~~gs~~~~~~~~~~~~a~~-lg~~la~~g~~V~tGG-~~GiMea~~~gA~~~g------g~~vGi~p~~~~~   83 (205)
T COG1611          13 GIRQIVVICGSARGIEPEEYYELARE-LGRELAKRGLLVITGG-GPGVMEAVARGALEAG------GLVVGILPGLLHE   83 (205)
T ss_pred             CcceEEEEEeCCCCCCCHHHHHHHHH-HHHHHHhCCcEEEeCC-chhhhhHHHHHHHHcC------CeEEEecCCCchh
Confidence            33456667776654444445555555 6666555677777777 5699999999998754      2578988865544

>cd02189 delta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa

Probab=81.63  E-value=4.6  Score=37.83  Aligned_cols=93  Identities=18%  Similarity=0.385  Sum_probs=63.4

Q ss_pred             eeCCCCHHHHHHHHHhh----hCCCCCCeEEEEecCCCCCC-----C----cHHHHHHHHHHHHHHhhhcCcEEEe----
Q psy11223          7 LSYDTRPENILQLFTRE----WSLELPKLLITVQGGKANFE-----L----QPKLKKVLRKGLLKAAKTTGAWVFT----   69 (192)
Q Consensus         7 ls~dt~p~~i~~l~~~~----W~l~~P~LVISV~GG~~~f~-----l----~~~l~~~f~~GL~kaA~sTgaWIiT----   69 (192)
                      |--|++|.+|-+++...    |.+.+.+++..--|-..||.     .    .....+.+|+ .+..+++...-+++    
T Consensus        58 v~iD~ep~vi~~i~~~~~~~~~~f~~~~~~~~~~gagnnwa~Gy~~~g~~~~~~~~d~ir~-~~E~cd~~~gf~~~~sl~  136 (446)
T cd02189          58 VLVDMEPKVIESTLSKSSGGTWKYDKKNVICQQSGSGNNWAYGYYVHGPQIKEDILDLIRK-EVEKCDSFEGFLVLHSLA  136 (446)
T ss_pred             eecCCCchHHHHhhcCCCCcccccCchheeecCCCCccchhccccccchhhHHHHHHHHHH-HHHhCCCccceEEEecCC
Confidence            34688999999998743    88888887777656556665     2    2444455666 55666666666665    


Q ss_pred             CCcccchhhHHHHHhhhhcccCCCceeEEeecc
Q psy11223         70 GGTNTGVTRQVGDALLMERSQRSGRVVSIGIAP  102 (192)
Q Consensus        70 gG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIAp  102 (192)
                      |||=.|+.-.+-++++|.-.+  .-+.++.|.|
T Consensus       137 GGtGSG~gs~l~e~l~d~y~~--~~~~~~~v~P  167 (446)
T cd02189         137 GGTGSGLGSRVTELLRDEYPE--SLLLNIVVWP  167 (446)
T ss_pred             CCcchHHHHHHHHHHHHhcCc--cceeeeeccC
Confidence            788899999999999985321  1245666666

The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. Delta-tubulin plays an essential role in forming the triplet microtubules of centrioles and basal bodies.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	192
3sbx_A	189	Putative uncharacterized protein; structural genom	95.89
3qua_A	199	Putative uncharacterized protein; structural genom	95.61
2iz6_A	176	Molybdenum cofactor carrier protein; metal transpo	95.07
1ydh_A	216	AT5G11950; structural genomics, protein structure	94.1
2a33_A	215	Hypothetical protein; structural genomics, protein	92.33
1t35_A	191	Hypothetical protein YVDD, putative lysine decarbo	92.32
1weh_A	171	Conserved hypothetical protein TT1887; rossman fol	90.79
1rcu_A	195	Conserved hypothetical protein VT76; structural ge	88.77
1wek_A	217	Hypothetical protein TT1465; rossman fold, structu	86.7
3bq9_A	460	Predicted rossmann fold nucleotide-binding domain	85.02

>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}

Probab=95.89  E-value=0.027  Score=45.92  Aligned_cols=68  Identities=21%  Similarity=0.242  Sum_probs=49.7

Q ss_pred             CCCCeEEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhcccCCCceeEEeeccc
Q psy11223         27 ELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPW  103 (192)
Q Consensus        27 ~~P~LVISV~GG~~~f~l~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApW  103 (192)
                      +.++.-|+|.||++  ...+...+.-++ |-++.-..|--|||||-..|+|..+.++..+..    +  ..|||-|-
T Consensus        10 ~~~~~~I~Vfg~s~--~~~~~~~~~A~~-lg~~la~~g~~lv~GGG~~GlM~a~~~ga~~~G----G--~viGv~p~   77 (189)
T 3sbx_A           10 EPGRWTVAVYCAAA--PTHPELLELAGA-VGAAIAARGWTLVWGGGHVSAMGAVSSAARAHG----G--WTVGVIPK   77 (189)
T ss_dssp             ---CCEEEEECCSS--CCCHHHHHHHHH-HHHHHHHTTCEEEECCBCSHHHHHHHHHHHTTT----C--CEEEEEET
T ss_pred             CCCCeEEEEEEeCC--CCChHHHHHHHH-HHHHHHHCCCEEEECCCccCHHHHHHHHHHHcC----C--cEEEEcCc
Confidence            35668899999998  555665555555 555655668899999999999999999997753    2  35887664

>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}

Probab=95.61  E-value=0.043  Score=45.09  Aligned_cols=68  Identities=16%  Similarity=0.226  Sum_probs=50.4

Q ss_pred             CCCeEEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhcccCCCceeEEeecccc
Q psy11223         28 LPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWG  104 (192)
Q Consensus        28 ~P~LVISV~GG~~~f~l~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApWG  104 (192)
                      ..+.-|+|.||++  ...+...+.-++ |-++....|--|||||-..|+|..+.++..+...      .+|||-|-.
T Consensus        20 ~~~~~v~Vfggs~--~~~~~~~~~A~~-lg~~La~~g~~lV~GGG~~GlM~a~~~gA~~~GG------~viGv~p~~   87 (199)
T 3qua_A           20 DRQWAVCVYCASG--PTHPELLELAAE-VGSSIAARGWTLVSGGGNVSAMGAVAQAARAKGG------HTVGVIPKA   87 (199)
T ss_dssp             -CCCEEEEECCSS--CCCHHHHHHHHH-HHHHHHHTTCEEEECCBCSHHHHHHHHHHHHTTC------CEEEEEEGG
T ss_pred             CCCCEEEEEECCC--CCCHHHHHHHHH-HHHHHHHCCCEEEECCCccCHHHHHHHHHHHcCC------cEEEEeCch
Confidence            3446899999998  556666555555 5566556688899999999999999999977532      468876654

>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A

Probab=95.07  E-value=0.35  Score=38.74  Aligned_cols=72  Identities=24%  Similarity=0.258  Sum_probs=49.4

Q ss_pred             CCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhcccCCCceeEEeecccc
Q psy11223         25 SLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWG  104 (192)
Q Consensus        25 ~l~~P~LVISV~GG~~~f~l~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApWG  104 (192)
                      .++..+..|+|+|+.+ ....+...+.-++ |.+.....|--|+|||-+.|||..+.++..+..    +  .+|||-|-.
T Consensus         8 ~~~~~~~~VaV~Gs~~-~g~~~~~~~~A~~-lg~~La~~g~~lVsGGg~~Gim~aa~~gAl~~g----G--~tigVlP~~   79 (176)
T 2iz6_A            8 CMSGRKPIIGVMGPGK-ADTAENQLVMANE-LGKQIATHGWILLTGGRSLGVMHEAMKGAKEAG----G--TTIGVLPGP   79 (176)
T ss_dssp             ---CCCCEEEEECCCG-GGCCHHHHHHHHH-HHHHHHHTTCEEEEECSSSSHHHHHHHHHHHTT----C--CEEEEECC-
T ss_pred             cccCCCCeEEEEeCCC-CCCCHHHHHHHHH-HHHHHHHCCCEEEECCCccCHhHHHHHHHHHcC----C--EEEEEeCch
Confidence            3566667899999877 2234555555454 555555569999999999999999999997753    2  367876643

>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A

Probab=94.10  E-value=0.16  Score=42.02  Aligned_cols=63  Identities=16%  Similarity=0.140  Sum_probs=46.1

Q ss_pred             EEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhcccCCCceeEEeecc
Q psy11223         32 LITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAP  102 (192)
Q Consensus        32 VISV~GG~~~f~l~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIAp  102 (192)
                      .|+|.||++.-. .+...+.-++ |-+..-..|--|||||-..|+|..+.++..+...      .+|||-|
T Consensus        11 ~V~V~ggsr~~~-~~~~~~~A~~-lg~~LA~~g~~lV~GGg~~GlM~aa~~gA~~~GG------~~iGv~p   73 (216)
T 1ydh_A           11 KICVFCGSHSGH-REVFSDAAIE-LGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGL------HVLGIIP   73 (216)
T ss_dssp             EEEEECCSCCCS-SHHHHHHHHH-HHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTC------CEEEEEE
T ss_pred             eEEEEeCCCCCC-CcHHHHHHHH-HHHHHHHCCCEEEECCCcccHhHHHHHHHHHcCC------cEEEEec
Confidence            799999988643 3444444444 5555555699999999999999999999987532      4678766

>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A

Probab=92.33  E-value=0.62  Score=38.35  Aligned_cols=67  Identities=19%  Similarity=0.119  Sum_probs=46.6

Q ss_pred             CeEEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhcccCCCceeEEeecccc
Q psy11223         30 KLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWG  104 (192)
Q Consensus        30 ~LVISV~GG~~~f~l~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApWG  104 (192)
                      ...|+|++|+.+-.- +...+.-++ |-+.....|--|||||-..|||..+.++..+...      .+|||-|-.
T Consensus        13 m~~IaV~cGS~~~~~-~~y~~~A~~-lg~~LA~~G~~vVsGGg~~GiM~aa~~gAl~~GG------~tiGVlP~~   79 (215)
T 2a33_A           13 FRRICVFCGSSQGKK-SSYQDAAVD-LGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR------HVIGIIPKT   79 (215)
T ss_dssp             CSEEEEECCSSCCSS-HHHHHHHHH-HHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTC------CEEEEEESS
T ss_pred             CCeEEEEECCCCCCc-hHHHHHHHH-HHHHHHHCCCEEEECCChhhHhHHHHHHHHHcCC------cEEEEcchH
Confidence            347999988887543 333333333 5555555699999999999999999999876532      467776543

>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1

Probab=92.32  E-value=0.43  Score=38.45  Aligned_cols=65  Identities=23%  Similarity=0.330  Sum_probs=45.1

Q ss_pred             EEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhcccCCCceeEEeecccc
Q psy11223         32 LITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWG  104 (192)
Q Consensus        32 VISV~GG~~~f~l~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApWG  104 (192)
                      .|+|.||++.-. .+...+.-++ |-+..-..|--|||||-..|+|..+.++..+...      .+|||-|-+
T Consensus         3 ~V~V~gss~~~~-~~~~~~~A~~-lg~~La~~g~~lV~GGg~~GiM~aa~~gA~~~gG------~~iGv~p~~   67 (191)
T 1t35_A            3 TICVFAGSNPGG-NEAYKRKAAE-LGVYMAEQGIGLVYGGSRVGLMGTIADAIMENGG------TAIGVMPSG   67 (191)
T ss_dssp             EEEEECCSSCCS-STHHHHHHHH-HHHHHHHTTCEEEECCCCSHHHHHHHHHHHTTTC------CEEEEEETT
T ss_pred             EEEEEECCCCCC-ChHHHHHHHH-HHHHHHHCCCEEEECCCcccHHHHHHHHHHHcCC------eEEEEeCch
Confidence            489999887422 3333444444 5555455699999999999999999999877532      367876643

>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1

Probab=90.79  E-value=0.79  Score=36.21  Aligned_cols=62  Identities=13%  Similarity=0.133  Sum_probs=43.0

Q ss_pred             EEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhcccCCCceeEEeecc
Q psy11223         32 LITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAP  102 (192)
Q Consensus        32 VISV~GG~~~f~l~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIAp  102 (192)
                      .|+|+|+.+.-. .+...+.-++ |-+.....|--|+|||-. |+|..+.++..+...      .+|||-|
T Consensus         3 ~V~V~gs~~~~~-~~~~~~~A~~-lg~~La~~g~~lV~Ggg~-GiM~aa~~gAl~~gG------~tiGV~~   64 (171)
T 1weh_A            3 LLAVFVSSRLSP-EDPLYARWVR-YGEVLAEEGFGLACGGYQ-GGMEALARGVKAKGG------LVVGVTA   64 (171)
T ss_dssp             EEEEECCSSCCT-TSHHHHHHHH-HHHHHHHTTEEEEECCSS-THHHHHHHHHHHTTC------CEEECCC
T ss_pred             EEEEEeCCCCCC-CcHHHHHHHH-HHHHHHHCCCEEEeCChh-hHHHHHHHHHHHcCC------cEEEEec
Confidence            589999887633 2233444344 555545569999999997 999999999977532      4688754

>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1

Probab=88.77  E-value=1.1  Score=36.34  Aligned_cols=64  Identities=22%  Similarity=0.305  Sum_probs=42.5

Q ss_pred             EEEEecCCCCCCC--cHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhcccCCCceeEEeeccc
Q psy11223         32 LITVQGGKANFEL--QPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPW  103 (192)
Q Consensus        32 VISV~GG~~~f~l--~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApW  103 (192)
                      .|+|+|+.+..+-  .....+.-++ |-+.....|--|||| ...|||..+.++..+...      .+|||-|-
T Consensus        25 ~IaV~Gss~~~~~~~~~~~~~~A~~-lg~~LA~~G~~vVsG-g~~GiM~aa~~gAl~~GG------~~iGVlP~   90 (195)
T 1rcu_A           25 KVVVVGYSGPVNKSPVSELRDICLE-LGRTLAKKGYLVFNG-GRDGVMELVSQGVREAGG------TVVGILPD   90 (195)
T ss_dssp             EEEEEECCSCTTSTTTGGGHHHHHH-HHHHHHHTTCEEEEC-CSSHHHHHHHHHHHHTTC------CEEEEEST
T ss_pred             eEEEEecCCCCCccccHHHHHHHHH-HHHHHHHCCCEEEeC-CHHHHHHHHHHHHHHcCC------cEEEEeCC
Confidence            6999999865211  0033333333 444444468899996 578999999999977432      46888665

>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1

Probab=86.70  E-value=2.2  Score=35.02  Aligned_cols=54  Identities=26%  Similarity=0.197  Sum_probs=38.6

Q ss_pred             eEEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhh
Q psy11223         31 LLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLME   87 (192)
Q Consensus        31 LVISV~GG~~~f~l~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG~Av~d~   87 (192)
                      ..|+|.||++.-.-+ ...+.-++ |-+.....|--|+|||- .|+|..+.++..+.
T Consensus        38 ~~VaV~Gss~~~~~~-~~~~~A~~-lg~~La~~g~~lVsGGg-~GiM~aa~~gAl~~   91 (217)
T 1wek_A           38 PLVSVFGSARFGEGH-PAYEAGYR-LGRALAEAGFGVVTGGG-PGVMEAVNRGAYEA   91 (217)
T ss_dssp             CEEEEECCSSCCTTS-HHHHHHHH-HHHHHHHHTCEEEECSC-SHHHHHHHHHHHHT
T ss_pred             CEEEEEeCCCCCCCc-HHHHHHHH-HHHHHHHCCCEEEeCCh-hhHHHHHHHHHHHc
Confidence            479999998763322 33333333 55554556999999999 99999999998774

>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}

Probab=85.02  E-value=6.9  Score=35.95  Aligned_cols=64  Identities=17%  Similarity=0.195  Sum_probs=41.2

Q ss_pred             EEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchh-hHHHHHhhhhccc--CCCceeEEeecc
Q psy11223         32 LITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVT-RQVGDALLMERSQ--RSGRVVSIGIAP  102 (192)
Q Consensus        32 VISV~GG~~~f~l~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~-k~VG~Av~d~~s~--~~~kv~~IGIAp  102 (192)
                      ++++.||+..   .+...+.-++ |-++.-..|--|+|||-. |+| ..+..|...++.+  ..+  ..|||-|
T Consensus       147 ivVv~GSs~~---~~~~Ye~A~e-LGr~LA~~G~~LVtGGG~-GlMEaa~aGA~~a~s~qr~~GG--~vIGIiP  213 (460)
T 3bq9_A          147 MVVCWGGHSI---NEIEYKYTKD-VGYHIGLRGLNICTGCGP-GAMKGPMKGATIGHAKQRVEGG--RYLGLTE  213 (460)
T ss_dssp             EEEEECCSSC---CHHHHHHHHH-HHHHHHHTTCEEEECCSS-GGGTHHHHHHHHHHHHTTCSSC--CEEEEEC
T ss_pred             EEEEEcCCCC---CCHHHHHHHH-HHHHHHHCCCEEEeCCcH-HHhhHHHhhHHhhcccccCCCC--EEEEEeC
Confidence            6777887764   3333333333 444555579999999997 999 7788888764321  233  3588854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	192
d1t35a_	179	Hypothetical protein YvdD {Bacillus subtilis [TaxI	94.9
d2q4oa1	183	Hypothetical protein At2g37210/T2N18.3 {Thale cres	93.81
d1ydhb_	181	Hypothetical protein At5g11950 {Thale cress (Arabi	93.23
d1weha_	171	Hypothetical protein TT1887 (TTHA0294) {Thermus th	93.08
d1rcua_	170	Hypothetical protein TM1055 {Thermotoga maritima [	91.85
d1weka_	208	Hypothetical protein TT1465 (TTHA1644) {Thermus th	90.53

>d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein YvdD
species: Bacillus subtilis [TaxId: 1423]

Probab=94.90  E-value=0.038  Score=42.20  Aligned_cols=62  Identities=23%  Similarity=0.335  Sum_probs=44.5

Q ss_pred             EEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhcccCCCceeEEeecc
Q psy11223         33 ITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAP  102 (192)
Q Consensus        33 ISV~GG~~~f~l~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIAp  102 (192)
                      |+|.||++.-. .+...+.-++ |-+..-..|-.+||||-..|+|..+.+++++...      ..|||.|
T Consensus         4 v~VF~~s~~~~-~~~~~~~a~~-lg~~la~~g~~lv~GGG~~GlMga~a~ga~~~gg------~v~gv~~   65 (179)
T d1t35a_           4 ICVFAGSNPGG-NEAYKRKAAE-LGVYMAEQGIGLVYGGSRVGLMGTIADAIMENGG------TAIGVMP   65 (179)
T ss_dssp             EEEECCSSCCS-STHHHHHHHH-HHHHHHHTTCEEEECCCCSHHHHHHHHHHHTTTC------CEEEEEE
T ss_pred             EEEEccCCCCc-CCHHHHHHHH-HHHHHHHCCCeEEECCCchHHHHHHhcchhhcCC------ceecccc
Confidence            89999998644 3333343333 5555555799999999999999999999987542      3477655

>d2q4oa1 c.129.1.1 (A:8-190) Hypothetical protein At2g37210/T2N18.3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein At2g37210/T2N18.3
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.81  E-value=0.099  Score=40.00  Aligned_cols=63  Identities=21%  Similarity=0.213  Sum_probs=45.6

Q ss_pred             EEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhcccCCCceeEEeecc
Q psy11223         32 LITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAP  102 (192)
Q Consensus        32 VISV~GG~~~f~l~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIAp  102 (192)
                      =|+|.||++.-. .+...+.-++ |-+..-..|--|||||-..|+|..+.++..+...    +  .|||-|
T Consensus         8 ~v~Vf~gs~~~~-~~~~~~~a~~-lg~~la~~g~~lV~GGG~~GlMga~a~ga~~~gg----~--v~Gi~~   70 (183)
T d2q4oa1           8 RICVFCGSSQGK-KSSYQDAAVD-LGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR----H--VIGIIP   70 (183)
T ss_dssp             EEEEECCSSCCS-SHHHHHHHHH-HHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTC----C--EEEEEE
T ss_pred             eEEEECcCCCCc-CCHHHHHHHH-HHHHHHHcCCeEEECCCCcchHHHHHHHHHhcCC----c--cccccc
Confidence            489999997544 4444444444 5566667788899999999999999999977542    3  466654

>d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein At5g11950
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.23  E-value=0.13  Score=39.23  Aligned_cols=63  Identities=16%  Similarity=0.110  Sum_probs=42.7

Q ss_pred             EEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhcccCCCceeEEeeccc
Q psy11223         33 ITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPW  103 (192)
Q Consensus        33 ISV~GG~~~f~l~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApW  103 (192)
                      |+|.||++.-.-++. .+.-++ |-+..-..|-=+||||-..|+|..+.+++++...    +  .|||.|=
T Consensus         5 v~Vf~gs~~~~~~~~-~~~a~~-lg~~La~~g~~lv~GGG~~GlMga~a~ga~~~gg----~--viGv~~~   67 (181)
T d1ydhb_           5 ICVFCGSHSGHREVF-SDAAIE-LGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGL----H--VLGIIPK   67 (181)
T ss_dssp             EEEECCSCCCSSTHH-HHHHHH-HHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTC----C--EEEEEEG
T ss_pred             EEEEccCCCCcCCHH-HHHHHH-HHHHHHHCCCeEEECCCchHHHHHHHHhHhhcCC----c--ccccchh
Confidence            799999975443333 333233 3334444577789999999999999999988643    3  4777553

>d1weha_ c.129.1.1 (A:) Hypothetical protein TT1887 (TTHA0294) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein TT1887 (TTHA0294)
species: Thermus thermophilus [TaxId: 274]

Probab=93.08  E-value=0.17  Score=38.34  Aligned_cols=62  Identities=13%  Similarity=0.133  Sum_probs=42.6

Q ss_pred             EEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhcccCCCceeEEeecc
Q psy11223         32 LITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAP  102 (192)
Q Consensus        32 VISV~GG~~~f~l~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIAp  102 (192)
                      .|+|.||++.-.-++-.+++ ++ |-++.-..|-.++|||-. |+|..+.+..++...    +  .|||-|
T Consensus         3 ~V~Vfgss~~~~~~~~~~~a-~~-lG~~la~~g~~lv~GGg~-G~M~a~a~ga~~~gG----~--~iGv~~   64 (171)
T d1weha_           3 LLAVFVSSRLSPEDPLYARW-VR-YGEVLAEEGFGLACGGYQ-GGMEALARGVKAKGG----L--VVGVTA   64 (171)
T ss_dssp             EEEEECCSSCCTTSHHHHHH-HH-HHHHHHHTTEEEEECCSS-THHHHHHHHHHHTTC----C--EEECCC
T ss_pred             EEEEEecCCCCCCCHHHHHH-HH-HHHHHHHCCCceeeCcch-HHHHHHHHHHHhccC----c--eeeeee
Confidence            48999999754433333322 22 445555579999999986 999999999987532    3  588853

>d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein TM1055
species: Thermotoga maritima [TaxId: 2336]

Probab=91.85  E-value=0.23  Score=37.39  Aligned_cols=62  Identities=26%  Similarity=0.440  Sum_probs=39.3

Q ss_pred             EEEecCCCCCCCcH--HHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhcccCCCceeEEeecc
Q psy11223         33 ITVQGGKANFELQP--KLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAP  102 (192)
Q Consensus        33 ISV~GG~~~f~l~~--~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIAp  102 (192)
                      |+|.|++..-.-+|  .+++.-.+ |-+..-..|-=|+|||. .|+|..+.+..+++..      ..|||-|
T Consensus         4 v~v~~~~~~~~~~p~~~~~~~a~~-lG~~la~~g~~V~~GG~-~GlM~ava~ga~~~gg------~viGilP   67 (170)
T d1rcua_           4 VVVVGYSGPVNKSPVSELRDICLE-LGRTLAKKGYLVFNGGR-DGVMELVSQGVREAGG------TVVGILP   67 (170)
T ss_dssp             EEEEECCSCTTSTTTGGGHHHHHH-HHHHHHHTTCEEEECCS-SHHHHHHHHHHHHTTC------CEEEEES
T ss_pred             EEEEEEecCCCCCcchHHHHHHHH-HHHHHHHCCCEEECCCc-cCHHHHHHHHHHhcCC------ccccccc
Confidence            56788765544332  45555444 43333335766677665 7999999999987642      3588866

>d1weka_ c.129.1.1 (A:) Hypothetical protein TT1465 (TTHA1644) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein TT1465 (TTHA1644)
species: Thermus thermophilus [TaxId: 274]

Probab=90.53  E-value=0.4  Score=37.27  Aligned_cols=64  Identities=28%  Similarity=0.276  Sum_probs=43.9

Q ss_pred             eEEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhcccCCCceeEEeeccc
Q psy11223         31 LLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPW  103 (192)
Q Consensus        31 LVISV~GG~~~f~l~~~l~~~f~~GL~kaA~sTgaWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApW  103 (192)
                      ..|+|.||++.-.-++..+.+ ++ |-+..-..|-=|+|||-. |+|..+.++.++...      ..|||.+.
T Consensus        34 ~~V~Vfgsa~~~~~~~~y~~A-~~-LG~~La~~g~~lv~GGg~-GlMgava~ga~~~gG------~viGi~~~   97 (208)
T d1weka_          34 PLVSVFGSARFGEGHPAYEAG-YR-LGRALAEAGFGVVTGGGP-GVMEAVNRGAYEAGG------VSVGLNIE   97 (208)
T ss_dssp             CEEEEECCSSCCTTSHHHHHH-HH-HHHHHHHHTCEEEECSCS-HHHHHHHHHHHHTTC------CEEEEEEC
T ss_pred             CeEEEECCCCCCCcChHHHHH-HH-HHHHHHhCcceEEeCCCc-hHHHHHHhhhhhcCC------ceeccccc
Confidence            459999999864434433332 22 444444568889999996 999999999877542      35888664