Diaphorina citri psyllid: psy11230

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550---
FDADVNATNKEGITLFQQAIVSSQTPIAKLLAERGANINDPFPDDGKSCLHIAATKNIRLVRLLLEYNVDVNAVDNLGNTVLHTVASIKTRDPTAVEILKTNRANVNIKNKEGDTPLHIAARTGNYKMVRVLIDHGAHTECKNHQGYNALHVAVGILLRKGADINVENNFGKTAFQMAYEMKNFPAIELFLKYGVNVEQCVCHENVKHGGQLLLHLVRNGHQNAVKLILEKGANVHAKDQLCKTALDIAVEHGHLKIVEFLLDHGACVDSLQFIHSPLHLAIEKQHIAIVQLLLRRNNNNININTKGPTNKAPLHLVVQRKSWNTTMFKTLLYHGANVNVKDDENKTPLHIAIESQCWDAVSLLVKHGADVNVIDNQGQMPLHIAVQNGYVAIPNLIRHGANVNARNKYAKTPLHIAVEQKNMSALNYLLEHGAQVDARTQLGKDPLYIAVEMHNLSIVEQLLKFKANVNSSDQFGRTVLHLAVKIQNVAILECLLVNKADINAKIISGIWKGYTPLHLAVESNNEAVINKLLDYNPDLDVKDKNGNTALHPS
ccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHHccccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHcccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccccHHHHHHHcccccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccccccc
****VNATNKEGITLFQQAIVSSQTPIAKLLAERGANINDPFPDDGKSCLHIAATKNIRLVRLLLEYNVDVNAVDNLGNTVLHTVASIKTRDPTAVEILKTNRANVNIKNKEGDTPLHIAARTGNYKMVRVLIDHGAHTECKNHQGYNALHVAVGILLRKGADINVENNFGKTAFQMAYEMKNFPAIELFLKYGVNVEQCVCHENVKHGGQLLLHLVRNGHQNAVKLILEKGANVHAKDQLCKTALDIAVEHGHLKIVEFLLDHGACVDSLQFIHSPLHLAIEKQHIAIVQLLLRRNNNNININTKGPTNKAPLHLVVQRKSWNTTMFKTLLYHGANVNVKDDENKTPLHIAIESQCWDAVSLLVKHGADVNVIDNQGQMPLHIAVQNGYVAIPNLIRHGANVNARNKYAKTPLHIAVEQKNMSALNYLLEHGAQVDARTQLGKDPLYIAVEMHNLSIVEQLLKFKANVNSSDQFGRTVLHLAVKIQNVAILECLLVNKADINAKIISGIWKGYTPLHLAVESNNEAVINKLLDYNPDLDVKDKNGNTALHPS
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FDADVNATNKEGITLFQQAIVSSQTPIAKLLAERGANINDPFPDDGKSCLHIAATKNIRLVRLLLEYNVDVNAVDNLGNTVLHTVASIKTRDPTAVEILKTNRANVNIKNKEGDTPLHIAARTGNYKMVRVLIDHGAHTECKNHQGYNALHVAVGILLRKGADINVENNFGKTAFQMAYEMKNFPAIELFLKYGVNVEQCVCHENVKHGGQLLLHLVRNGHQNAVKLILEKGANVHAKDQLCKTALDIAVEHGHLKIVEFLLDHGACVDSLQFIHSPLHLAIEKQHIAIVQLLLRRNNNNININTKGPTNKAPLHLVVQRKSWNTTMFKTLLYHGANVNVKDDENKTPLHIAIESQCWDAVSLLVKHGADVNVIDNQGQMPLHIAVQNGYVAIPNLIRHGANVNARNKYAKTPLHIAVEQKNMSALNYLLEHGAQVDARTQLGKDPLYIAVEMHNLSIVEQLLKFKANVNSSDQFGRTVLHLAVKIQNVAILECLLVNKADINAKIISGIWKGYTPLHLAVESNNEAVINKLLDYNPDLDVKDKNGNTALHPS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005911 [CC]cell-cell junctionprobableGO:0005575, GO:0030054
GO:0005200 [MF]structural constituent of cytoskeletonprobableGO:0003674, GO:0005198
GO:0016323 [CC]basolateral plasma membraneprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459
GO:0005856 [CC]cytoskeletonprobableGO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0044444 [CC]cytoplasmic partprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0043005 [CC]neuron projectionprobableGO:0005575, GO:0097458, GO:0042995, GO:0044464, GO:0005623
GO:0045121 [CC]membrane raftprobableGO:0005575, GO:0044425, GO:0016020
GO:0042383 [CC]sarcolemmaprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1N0R, chain A
Confidence level:very confident
Coverage over the Query: 409-538
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Template: 1N0R, chain A
Confidence level:very confident
Coverage over the Query: 11-138
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Template: 1WDY, chain A
Confidence level:very confident
Coverage over the Query: 241-289,328-544
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Template: 1WDY, chain A
Confidence level:very confident
Coverage over the Query: 209-287,326-506
View the alignment between query and template
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Template: 3HRA, chain A
Confidence level:very confident
Coverage over the Query: 10-149,175-184,218-265
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Template: 3EU9, chain A
Confidence level:very confident
Coverage over the Query: 5-146,172-265
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Template: 3UTM, chain A
Confidence level:very confident
Coverage over the Query: 208-366,379-535
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Template: 1S70, chain B
Confidence level:very confident
Coverage over the Query: 8-263
View the alignment between query and template
View the model in PyMOL