Diaphorina citri psyllid: psy11239


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410
MEWFDLFYNPKKGRPTPIYYCKNISNILKGSKIFLKREDLNFTGAHKMNNSIAQSLLAKFLKKKRIICETGAGMHGVSTATSCCLLNLESIIYIGENDYKRQNINVKKIKLLGGTVYLVQYGNLKEAMNEAIKDWSNNILNSHYLIGTASGPHPYPTIVRDFQSIIGYEIHQQLNFNFYNKKYILACVGGGSNALGRPTPIYYCKNISNILKGSKIFLKREDLNFTGAHKMNNSIAQSLLAKFLKKKRIICETGAGMHGVSTATSCCLLNLESIIYIGENDYKRQNINVKKIKLLGGTVYLVQYGNLKEAMNEAIKDWSNNILNSHYLIGTASGPHPYPTIVRDFQSIIGYEIHQQLNFNFYNKKYILACVGGGSNALGIFYTFINSNFKLVAIESGGISKKRTASREYT
cHHHHHHHcccccccccccHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHcccEEEEEcHHHHHHccHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHcccccEEEECccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccccccccccHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHcccEEEEEccHHHHHccHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHcccccEEEECccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHcccccccccEEEEEEEccccccccccccccc
MEWFDLFYNPKKGRPTPIYYCKNISNILKGSKIFLKREDLNFTGAHKMNNSIAQSLLAKFLKKKRIICETGAGMHGVSTATSCCLLNLESIIYIGENDYKRQNINVKKIKLLGGTVYLVQYGNLKEAMNEAIKDWSNNILNSHYLIGTASGPHPYPTIVRDFQSIIGYEIHQQLNFNFYNKKYILACVGGGSNALGRPTPIYYCKNISNILKGSKIFLKREDLNFTGAHKMNNSIAQSLLAKFLKKKRIICETGAGMHGVSTATSCCLLNLESIIYIGENDYKRQNINVKKIKLLGGTVYLVQYGNLKEAMNEAIKDWSNNILNSHYLIGTASGPHPYPTIVRDFQSIIGYEIHQQLNFNFYNKKYILACVGGGSNALGIFYTFINSNFKLVAIESGGIS**********
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MEWFDLFYNPKKGRPTPIYYCKNISNILKGSKIFLKREDLNFTGAHKMNNSIAQSLLAKFLKKKRIICETGAGMHGVSTATSCCLLNLESIIYIGENDYKRQNINVKKIKLLGGTVYLVQYGNLKEAMNEAIKDWSNNILNSHYLIGTASGPHPYPTIVRDFQSIIGYEIHQQLNFNFYNKKYILACVGGGSNALGRPTPIYYCKNISNILKGSKIFLKREDLNFTGAHKMNNSIAQSLLAKFLKKKRIICETGAGMHGVSTATSCCLLNLESIIYIGENDYKRQNINVKKIKLLGGTVYLVQYGNLKEAMNEAIKDWSNNILNSHYLIGTASGPHPYPTIVRDFQSIIGYEIHQQLNFNFYNKKYILACVGGGSNALGIFYTFINSNFKLVAIESGGISKKRTASREYT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Tryptophan synthase beta chain 1 The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine.confidentO28672
Tryptophan synthase beta chain The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine.confidentB1YLS4
Tryptophan synthase beta chain 1 The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine.confidentQ9V1G8

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0000162 [BP]tryptophan biosynthetic processprobableGO:0044238, GO:0019752, GO:0042401, GO:0034641, GO:0006807, GO:0044281, GO:0044283, GO:1901362, GO:1901360, GO:1901576, GO:0044710, GO:0044711, GO:0006520, GO:0006568, GO:0071704, GO:0046219, GO:0006082, GO:0046483, GO:1901605, GO:1901607, GO:0018130, GO:0009308, GO:0009309, GO:0009987, GO:0006725, GO:0006586, GO:0044106, GO:0009058, GO:0008150, GO:0008152, GO:0042435, GO:1901564, GO:0042430, GO:0009072, GO:0009073, GO:0008652, GO:0044271, GO:1901566, GO:0006576, GO:0044249, GO:0046394, GO:0016053, GO:0044237, GO:0043436, GO:0019438
GO:0043231 [CC]intracellular membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0004834 [MF]tryptophan synthase activityprobableGO:0016835, GO:0016836, GO:0003674, GO:0016829, GO:0003824
GO:0044444 [CC]cytoplasmic partprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0016020 [CC]membraneprobableGO:0005575

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2O2E, chain A
Confidence level:very confident
Coverage over the Query: 2-218
View the alignment between query and template
View the model in PyMOL
Template: 1X1Q, chain A
Confidence level:very confident
Coverage over the Query: 196-402
View the alignment between query and template
View the model in PyMOL