Diaphorina citri psyllid: psy11330

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520------
MAADNVWTQLYNTLQALVWLIDDACEIIDLTMNSATNTAGISISIIQPKTSILDKPINTKVKHDISINLYALLFSELVQYCQNKSLSVPEFQSKLHEVGQSIGAKLIDINFYREKNGKREIKLLNILQFVKINLWKNIFGKECDKLERANDDERTYYLIEQESLVNKFISVPKDKGSLNCAIFVAGIVEAVLNNCGFKSTVTAHWHKGTTYMIQFDEQEGKFTALQLQIMEENIASQWRRGAGKVERGACKDMTKKNSSYPVVNSSTEDMIQVGEKDGAKSGNSAVDPSVQTFCRSVSAANVGYHEYLMDALGKEPLGGIISWLVLFQIIDLTMNSATNTAGISISIIQPKTSILDKPINTKVKHDISINLYALLFSELVQYCQNKSLSVPEFQSKLHEVGQSIGAKLIDINFYREKNGKREIKLLNILQFVKINLWKNIFGKECDKLERANDDERTYYLIEQESLVNKFISVPKDKGSLNCAIFVAGIVEAVLNNCGFKSTVTAHWHKGTTYMIQFDEQVIARDK
cccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccccccccccEEEEEcccccEEEEEccccccccccccHHHHHHHHHHHHcccccEEEEEEEcccEEEEEEcccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEcccccccEEccccccccccccccccccccEEEcccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccccccccccccccEEEEEcccEEEEEEEccccccccccccHHHHHHHHHHHHcccccEEEEEEEcccEEEEEEccHHHHHHcc
****NVWTQLYNTLQALVWLIDDACEIIDLTMNS**********************INTKVKHDISINLYALLFSELVQYCQNKSLSVPEFQSKLHEVGQSIGAKLIDINFYREKNGKREIKLLNILQFVKINLWKNIFGKECDKLERANDDERTYYLIEQESLVNKFISVPKDKGSLNCAIFVAGIVEAVLNNCGFKSTVTAHWHKGTTYMIQFDEQEGKFTALQLQIMEENIASQWRRG************************************************VQTFCRSVSAANVGYHEYLMDALGKEPLGGIISWLVLFQIIDLTMNSATNTAGISI****PKTSILDKPINTKVKHDISINLYALLFSELVQYCQNKSLSVPEFQSKLHEVGQSIGAKLIDINFYREKNGKREIKLLNILQFVKINLWKNIFGKECDKLERANDDERTYYLIEQESLVNKFISVPKDKGSLNCAIFVAGIVEAVLNNCGFKSTVTAHWHKGTTYMIQFDEQVIAR**
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MAADNVWTQLYNTLQALVWLIDDACEIIDLTMNSATNTAGISISIIQPKTSILDKPINTKVKHDISINLYALLFSELVQYCQNKSLSVPEFQSKLHEVGQSIGAKLIDINFYREKNGKREIKLLNILQFVKINLWKNIFGKECDKLERANDDERTYYLIEQESLVNKFISVPKDKGSLNCAIFVAGIVEAVLNNCGFKSTVTAHWHKGTTYMIQFDEQEGKFTALQLQIMEENIASQWRRGAGKVERGACKDMTKKNSSYPVVNSSTEDMIQVGEKDGAKSGNSAVDPSVQTFCRSVSAANVGYHEYLMDALGKEPLGGIISWLVLFQIIDLTMNSATNTAGISISIIQPKTSILDKPINTKVKHDISINLYALLFSELVQYCQNKSLSVPEFQSKLHEVGQSIGAKLIDINFYREKNGKREIKLLNILQFVKINLWKNIFGKECDKLERANDDERTYYLIEQESLVNKFISVPKDKGSLNCAIFVAGIVEAVLNNCGFKSTVTAHWHKGTTYMIQFDEQVIARDK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Trafficking protein particle complex subunit 5 May play a role in vesicular transport from endoplasmic reticulum to Golgi.confidentQ8IUR0
Trafficking protein particle complex subunit 5 May play a role in vesicular transport from endoplasmic reticulum to Golgi.confidentQ2NL13
Trafficking protein particle complex subunit 5 May play a role in vesicular transport from endoplasmic reticulum to Golgi.confidentQ9CQA1

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0030008 [CC]TRAPP complexprobableGO:0043234, GO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2J3W, chain B
Confidence level:very confident
Coverage over the Query: 62-218,233-243
View the alignment between query and template
View the model in PyMOL
Template: 2J3W, chain B
Confidence level:very confident
Coverage over the Query: 364-526
View the alignment between query and template
View the model in PyMOL