Diaphorina citri psyllid: psy11418

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550---

MINERIRHLPNLSGAENSQQHTTAQTVTHLNTNYTQQCLTSEFFRLRSAAVEQMKEQGPHPYPHKFTVTSSLEDFIEKYSDLPDAQVLENVTLSVAGRVHAIRESGTKLMFYDLRGEGLKIQVMANARMYQSEEEFASDLVKIKRGDIIGVTGSPGKTKKGELSIIPKKLTLLSPCLHMLPHMHFGVKDKETRFRQRYLDLMINERIRHKFIVRAQIIAYVRRYLDSLGFLEVETPMMNMIAGGATAKPFVTHHNDLNMDLYMRIAPELYLKMLVVGGLDRVYEVGRQFRNEGIDLTHNPEFTTCEFYMAYADYNDLMHLTEDLISGRKEDRNRPCVMANARMYQSEEEFASDLVKIKRGDIIGVTGSPGKTKKGELSIIPKKLTLLSPCLHMLPHMHFGVKDKETRFRQRYLDLMINERIRHKFIVRAQIIAYVRRYLDSLGFLEVETPMMNMIAGGATAKPFVTHHNDLNMDLYMRIAPELYLKSTHGSYKVTYHPDGPESGSPVEIDFTPPFRRLHMFPALEAALGVKLPNPTEFDTPEANKFLSDPNGE

ccHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHccccccccccccEEEEEEEEEHHccccccEEEEEEEEccEEEEEEEEccccccHHHHHHHHcccccccEEEEEEEcccccccEEEEEccEEEECccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccccccccccccccHHHHHcccccHHHHHHcccccEEEccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccEEEccccccHHHHHHHHcccccccCEEEEEccccccccccEEEEcccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccccccccccccccccccccHHHHHHccHHHHHHHHccccEEEccccccccccccccccccccEEEHHHHHHHHccccccccccccHHHHHHHHHccccc

***********************************QQCLTSEFFRLRSAAVEQMKEQGPHPYPHKFTVTSSLEDFIEKYSDLPDAQVLENVTLSVAGRVHAIRESGTKLMFYDLRGEGLKIQVMANARMYQSEEEFASDLVKIKRGDIIGVTGSPGKTKKGELSIIPKKLTLLSPCLHMLPHMHFGVKDKETRFRQRYLDLMINERIRHKFIVRAQIIAYVRRYLDSLGFLEVETPMMNMIAGGATAKPFVTHHNDLNMDLYMRIAPELYLKMLVVGGLDRVYEVGRQFRNEGIDLTHNPEFTTCEFYMAYADYNDLMHLTEDLISGRKEDRNRPCVMANARMYQSEEEFASDLVKIKRGDIIGVTGSPGKTKKGELSIIPKKLTLLSPCLHMLPHMHFGVKDKETRFRQRYLDLMINERIRHKFIVRAQIIAYVRRYLDSLGFLEVETPMMNMIAGGATAKPFVTHHNDLNMDLYMRIAPELYLKSTHGSYKVTYHPDGPESGSPVEIDFTPPFRRLHMFPALEAALGVKLPNPTEFDTPEANKFLSDPNG*

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Lysine--tRNA ligase	Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA.	confident	Q99MN1
Lysine--tRNA ligase	Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA.	confident	P37879
Lysine--tRNA ligase	Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA. When secreted, acts as a signaling molecule that induces immune response through the activation of monocyte/macrophages. Catalyzes the synthesis of diadenosine oligophosphate (Ap4A), a signaling molecule involved in the activation of MITF transcriptional activity. Interacts with HIV-1 virus GAG protein, facilitating the selective packaging of tRNA(3)(Lys), the primer for reverse transcription initiation.	confident	Q15046

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0005875 [CC]	microtubule associated complex	probable	GO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0015966 [BP]	diadenosine tetraphosphate biosynthetic process	probable	GO:0044249, GO:0034641, GO:0009165, GO:0044281, GO:0015959, GO:1901362, GO:1901360, GO:0006139, GO:0044710, GO:0008150, GO:0071704, GO:0018130, GO:0009987, GO:1901576, GO:0015960, GO:0006725, GO:0015965, GO:0009058, GO:0009117, GO:0008152, GO:0034654, GO:0090407, GO:0055086, GO:0046483, GO:0044238, GO:0044271, GO:0044237, GO:0006796, GO:0006807, GO:1901293, GO:0006793, GO:0019637, GO:0019438, GO:0006753
GO:0016597 [MF]	amino acid binding	probable	GO:0043168, GO:0003674, GO:0031406, GO:0005488, GO:0043167
GO:0016020 [CC]	membrane	probable	GO:0005575
GO:0005829 [CC]	cytosol	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0044699 [BP]	single-organism process	probable	GO:0008150
GO:0004824 [MF]	lysine-tRNA ligase activity	probable	GO:0004812, GO:0003824, GO:0003674, GO:0016874, GO:0016875, GO:0016876
GO:0005524 [MF]	ATP binding	probable	GO:0043168, GO:0003674, GO:0005488, GO:0030554, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032553, GO:0032559, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0045335 [CC]	phagocytic vesicle	probable	GO:0005737, GO:0005575, GO:0043231, GO:0016023, GO:0031410, GO:0044464, GO:0044444, GO:0005623, GO:0031988, GO:0030139, GO:0043229, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0031982
GO:0006430 [BP]	lysyl-tRNA aminoacylation	probable	GO:0006139, GO:0019752, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0044281, GO:0034645, GO:0034660, GO:1901360, GO:0044267, GO:0044710, GO:0044260, GO:0006520, GO:0071704, GO:0010467, GO:1901576, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0043436, GO:0046483, GO:0016070, GO:0044238, GO:1901564, GO:0006082, GO:0019538, GO:0044237, GO:0043170, GO:0006399, GO:0043038, GO:0043039, GO:0006418, GO:0006412
GO:0005739 [CC]	mitochondrion	probable	GO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0009506 [CC]	plasmodesma	probable	GO:0055044, GO:0005575, GO:0030054, GO:0005911
GO:0017101 [CC]	aminoacyl-tRNA synthetase multienzyme complex	probable	GO:0043234, GO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0000049 [MF]	tRNA binding	probable	GO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:1901363, GO:0003723

Prediction of Enzyme Commission Number

EC Number	Description	Confidence Level
6.-.-.-	Ligases.	probable
6.1.-.-	1D-1-guanidino-3-amino-1,3-dideoxy-scyllo-inositol transaminase.	probable
6.1.1.-	Ligases forming aminoacyl-tRNA and related compounds.	probable
6.1.1.6	Lysine--tRNA ligase.	probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3BJU, chain A
Confidence level:very confident
Coverage over the Query: 38-329
View the alignment between query and template
View the model in PyMOL

Template: 3BJU, chain A
Confidence level:very confident
Coverage over the Query: 325-496
View the alignment between query and template
View the model in PyMOL

Template: 1C0A, chain A
Confidence level:very confident
Coverage over the Query: 325-529
View the alignment between query and template
View the model in PyMOL

Template: 3A74, chain A
Confidence level:very confident
Coverage over the Query: 325-551
View the alignment between query and template
View the model in PyMOL