Diaphorina citri psyllid: psy11425

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670--

MSEKDYMNEEQLAFFKFRLKKLENDLLKNIVKTTEYLRETILVPDPADRATIEEENTLELRARDRERKLLIKIQQSIINIDKKEYGWCKDTGEPIGILRLLAKPMATLSLEAQQRHELKKKSFKSFGNIFIISAPSGAGKSTLVNELLKKDHKIKLSISTTTRPMRPGEKNGREYYFTNIDNFKKLQKSGKFLEWAEVHGNFYGTSFFPIVREIKSNVDILLEIDFQGAKQIKKKFPNAIGIFILPPSLDSLKERLYKRGQDKYDVISRRILSANKEISYANKFDYIIINNKFSKALLQLKAIINANRCFMARVTIEDGLKKINNRFKLTLCAVYRARQLLKGHTKKIIGCDNDKVTVIALREISHGKIGVEIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKSYEKK

ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHccccccccHHHHHHHHHHHHcccccccEEEEEcccccccHHHHHHHHccccEEEEEEEEcccccccccccccCEEEcccHHHHHHHHccccEEEHHHccccccccccHHHHHHcccccEEEEEEcccHHHHHHHccccEEEEEccccHHHHHHHHHHHccccHHHHHHHHHcccccccccccccEEEEccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEEEEEcccccccccccccccccccHHHHHHHHHcccccEEEEcccccccccccccEEEEEccccccccCEECccccccccccccccccccHHHHHHHHHHHccccEEEcccccHHHHHHcccccccHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEEcccHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccccEEEEcccccEEEEEEEEEcccccEEEEEEECccccHHHHHHHHHHHHHHHHHHHHHHHHHHHc

********EEQLAFFKFRLKKLENDLLKNIVKTTEYLRETILVPDPADRATIEEENTLELRARDRERKLLIKIQQSIINIDKKEYGWCKDTGEPIGILRLLAKPMATLSLE*********KSFKSFGNIFIISAPSGAGKSTLVNELLKKDHKIKLSIS*************REYYFTNIDNFKKLQKSGKFLEWAEVHGNFYGTSFFPIVREIKSNVDILLEIDFQGAKQIKKKFPNAIGIFILPPSLDSLKERLYKRGQDKYDVISRRILSANKEISYANKFDYIIINNKFSKALLQLKAIINANRCFMARVTIEDGLKKINNRFKLTLCAVYRARQLLKGHTKKIIGCDNDKVTVIALREISHGKIGVEIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKSYEK*

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Porphobilinogen deaminase	Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.	confident	B2T1D1
Porphobilinogen deaminase	Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.	confident	Q21XQ9
Porphobilinogen deaminase	Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.	confident	Q2T071

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0005488 [MF]	binding	probable	GO:0003674
GO:0016740 [MF]	transferase activity	probable	GO:0003824, GO:0003674
GO:0005634 [CC]	nucleus	probable	GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0005737 [CC]	cytoplasm	probable	GO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0006461 [BP]	protein complex assembly	probable	GO:0022607, GO:0071822, GO:0070271, GO:0043933, GO:0016043, GO:0065003, GO:0044085, GO:0008150, GO:0071840

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GTK, chain A
Confidence level:very confident
Coverage over the Query: 371-402,420-670
View the alignment between query and template
View the model in PyMOL

Template: 1S96, chain A
Confidence level:very confident
Coverage over the Query: 126-310
View the alignment between query and template
View the model in PyMOL

Template: 1TJL, chain A
Confidence level:very confident
Coverage over the Query: 1-123
View the alignment between query and template
View the model in PyMOL

Template: 3LU0, chain E
Confidence level:very confident
Coverage over the Query: 312-370
View the alignment between query and template
View the model in PyMOL