Diaphorina citri psyllid: psy11511


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-
MELAVGQFTRRGPIGESKLGVHFLVSPNCAPLQTKVSDWTSSFKIEVPLQYCTSIVGNIRVFLVPYFIILFLCGIPILYMELAVGQFTRRGPIGVLSKLCPFFKGAGISSVIISFFMSTYYNVLIAYSLYYFSTSFRSQLPWQHCGNRWNTQHCWVPPTLTGEDLGAVSLLQNLSKPVPSKTPSEEFYNISDEMSTCSSYSDSISDVGSTFKPRKRDHWTSKVQFILACVGYSIGIGNLWRFPHKVLQISSGIDQMGDFRWELVACSFVSWILVYFALWKSVRSSGRVLYFTATIPFLLIFVFLCFSLTLDGSEIGLRYFFLPNFELLSDHKVWVNAGAQIFNSIGIAYGAVITFSSYNKYNNQIIVDTMVVSIINTITSVLIGVFIFITIGNITYEHETSIENVILDGFISSYNKYNNQIIVDTMVVSIINTITSVLIGVFIFITIGNITYEHETSIENVILDGPGLIFVVYPQALAKLPFPNFWAVLFFFSLLCLALNSQFALVEVVVTSIQDGFPRWIKRYLVCHEIVVLVVCIVSFFFGLPYVTQGGIYFFQLIDHYTASTAVMYVAFFEVVAVAWIYGSDKLARNVHHMTGKFPSLYFRFCWSIAAPLLILIRISLTHLLGQLTNT
cccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEEEccccEEHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccEEEEccccccccccccHHHHHHHHHHHHHHHEEEEccccccccEEEEEEcHHHHHHHHHHHHcccccccccccEEEEccccccccccHHHHHHHHHHHHHHccccccHHHccccccccccccEEEEEEEEEcccccHHHHHHHHHHHccccccccccHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEcccccEEEEEcHHHHHcccccHHHHHHHHHHHHHHccccccEEEEEEEEEEEccccHHHHcccccEEEEHHHHHHHHHHHccccECccEEEEEEEEcccccHHHHHHHHHHHHEEEEEEcccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
************************************SDWTSSFKIEVPLQYCTSIVGNIRVFLVPYFIILFLCGIPILYMELAVGQFTRRGPIGVLSKLCPFFKGAGISSVIISFFMSTYYNVLIAYSLYYFSTSFRSQLPWQHCGNRWNTQHCWVPPTLTGEDLGAVSLLQNLSKPVPSKTPSEEFYNISDEMSTCSSYSDSISDVGSTFKPRKRDHWTSKVQFILACVGYSIGIGNLWRFPHKVLQISSGIDQMGDFRWELVACSFVSWILVYFALWKSVRSSGRVLYFTATIPFLLIFVFLCFSLTLDGSEIGLRYFFLPNFELLSDHKVWVNAGAQIFNSIGIAYGAVITFSSYNKYNNQIIVDTMVVSIINTITSVLIGVFIFITIGNITYEHETSIENVILDGFISSYNKYNNQIIVDTMVVSIINTITSVLIGVFIFITIGNITYEHETSIENVILDGPGLIFVVYPQALAKLPFPNFWAVLFFFSLLCLALNSQFALVEVVVTSIQDGFPRWIKRYLVCHEIVVLVVCIVSFFFGLPYVTQGGIYFFQLIDHYTASTAVMYVAFFEVVAVAWIYGSDKLARNVHHMTGKFPSLYFRFCWSIAAPLLILIRISLTHLLGQLTN*
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxHHHHHHHHHHHHHxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxx
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MELAVGQFTRRGPIGESKLGVHFLVSPNCAPLQTKVSDWTSSFKIEVPLQYCTSIVGNIRVFLVPYFIILFLCGIPILYMELAVGQFTRRGPIGVLSKLCPFFKGAGISSVIISFFMSTYYNVLIAYSLYYFSTSFRSQLPWQHCGNRWNTQHCWVPPTLTGEDLGAVSLLQNLSKPVPSKTPSEEFYNISDEMSTCSSYSDSISDVGSTFKPRKRDHWTSKVQFILACVGYSIGIGNLWRFPHKVLQISSGIDQMGDFRWELVACSFVSWILVYFALWKSVRSSGRVLYFTATIPFLLIFVFLCFSLTLDGSEIGLRYFFLPNFELLSDHKVWVNAGAQIFNSIGIAYGAVITFSSYNKYNNQIIVDTMVVSIINTITSVLIGVFIFITIGNITYEHETSIENVILDGFISSYNKYNNQIIVDTMVVSIINTITSVLIGVFIFITIGNITYEHETSIENVILDGPGLIFVVYPQALAKLPFPNFWAVLFFFSLLCLALNSQFALVEVVVTSIQDGFPRWIKRYLVCHEIVVLVVCIVSFFFGLPYVTQGGIYFFQLIDHYTASTAVMYVAFFEVVAVAWIYGSDKLARNVHHMTGKFPSLYFRFCWSIAAPLLILIRISLTHLLGQLTNT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Sodium-dependent serotonin transporter Serotonin transporter whose primary function in the central nervous system involves the regulation of serotonergic signaling via transport of serotonin molecules from the synaptic cleft back into the pre-synaptic terminal for re-utilization. Plays a key role in mediating regulation of the availability of serotonin to other receptors of serotonergic systems. Terminates the action of serotonin and recycles it in a sodium-dependent manner.confidentO35899
Sodium- and chloride-dependent GABA transporter 2 Terminates the action of GABA by its high affinity sodium-dependent reuptake into presynaptic terminals. Can also transport beta-alanine and taurine.confidentP31649

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0042995 [CC]cell projectionprobableGO:0005575, GO:0044464, GO:0005623
GO:0005215 [MF]transporter activityprobableGO:0003674
GO:0044459 [CC]plasma membrane partprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425
GO:0015804 [BP]neutral amino acid transportprobableGO:0006810, GO:0044765, GO:0015849, GO:0006811, GO:0006865, GO:0015711, GO:0071705, GO:0006820, GO:0008150, GO:0071702, GO:0051234, GO:0051179, GO:0044699, GO:0046942

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2A65, chain A
Confidence level:very confident
Coverage over the Query: 36-155,179-189,245-391,448-620
View the alignment between query and template
View the model in PyMOL
Template: 2A65, chain A
Confidence level:very confident
Coverage over the Query: 216-252,270-276,288-360
View the alignment between query and template
View the model in PyMOL