Diaphorina citri psyllid: psy11602

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080---
VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKVLIDEAMIQNEKDLIATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADKLEDFSKFSKILVCCVCLGERSDDVNEIVECDSCGVTVHEVKIQQEFLAIKFLIRYLLFWFQLEDFSKFSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGIAEPTCELCPNFGENHLRGLFENIKNGHAQRDRMRYHACHLRDSRDSSDGDRGGIFKETDVGKWVHLVCALYIPGVAFGEVDRLSNVTLFEMPYSRWGAKSCALCPDESYARTELALQSPPVNCVPTLLVYMEVVFPQPPQRKLGKYKVKYVDMKSLRNPPWVPTQKLARPLTSSATLCRALLHKARLMEVDTGAVAQAQSDLATLADMNKKWHIPLAFNVEFVAYFLNRNGRLGKLTREQRALAVENDSLQSEQSRLQKTYDELVYMEVVFPQPPLSKQAWGVLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLMGW
ccccccccccccccccccccEEEECccccccccccccccccccccccEEccccccHHccccccccccccccHccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccHHHHccccEEEEEcccccEEEEEcccccHHHHHHcccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccHHHHccccccccccccCECccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccHHHHccccEEEEEcccccEEEEEcccccHHHHHHccccEEcccccccccccEEEcccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccHHHHHHHHHHccccccccHHHHHcccccccccccccccccccccEEEEccccHHHHHHHHcccccccccccccccccccHHHcccccccccccccccccccccccHHHHHHHccccHHHHcccccHHHHHHHHcccccHHHHHHccccccHHHHHHcccccccccEEEEEHHccccHHHHHHHEEEEcccccccccEEEEEEcccccccccccccEEECccccccccccccccccCEEEcccccccccccHHHHHHcccccccccCCccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEEEEEccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHccccccccccccccccHHHHHHHHHHcccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEccccccccccHHccccccccccccccccccCECccccccccccccccccccccccccccccc
*****EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDE****************LTMSLFSQVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT**********************LIDEAMIQNEKDLIATEKERNNALREVIGKGEKVGDS*PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADKLEDFSKFSKILVCCVCLGERSDDVNEIVECDSCGVTVHEVKIQQEFLAIKFLIRYLLFWFQLEDFSKFSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGIAEPTCELCPNFGENHLRGLFENIKNGHAQRDRMRYHACHL************GIFKETDVGKWVHLVCALYIPGVAFGEVDRLSNVTLFEMPYSRWGAKSCALCPDESYARTELALQSPPVNCVPTLLVYMEVVFPQPPQRKLGKYKVKYVDMKSLRNPPWVPTQKLARPLTSSATLCRALLHKARLMEVDTGAVAQAQSDLATLADMNKKWHIPLAFNVEFVAYFLNRNGRLGKLT********************QKTYDELVYMEVVFPQPPLSKQAWGVLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLL***********
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VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKVLIDEAMxxxxxxxxxxxxxxxxxxxxxIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADKLEDFSKFSKILVCCVCLGERSDDVNEIVECDSCGVTVHEVKIQQEFLAIKFLIRYLLFWFQLEDFSKFSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGIAEPTCELCPNFGENHLRGLFENIKNGHAQRDRMRYHACHLRDSRDSSDGDRGGIFKETDVGKWVHLVCALYIPGVAFGEVDRLSNVTLFEMPYSRWGAKSCALCPDESYARTELALQSPPVNCVPTLLVYMEVVFPQPPQRKLGKYKVKYVDMKSLRNPPWVPTQKLARPLTSSATLCRALLHKARLMEVDTGAVAQAQSDLATLADMNKKWHIPLAFNVEFVAYFLNRNGRxxxxxxxxxxxxxxxxxxxxxQSRLQKTYDELVYMEVVFPQPPLSKQAWGVLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLMGW

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Serine--tRNA ligase Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).confidentQ4J8I4
Serine--tRNA ligase Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).confidentQ5JE75
Serine--tRNA ligase Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).confidentQ8U1K2

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005524 [MF]ATP bindingprobableGO:0043168, GO:0003674, GO:0005488, GO:0030554, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032553, GO:0032559, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0004828 [MF]serine-tRNA ligase activityprobableGO:0004812, GO:0003824, GO:0003674, GO:0016874, GO:0016875, GO:0016876
GO:0045335 [CC]phagocytic vesicleprobableGO:0005737, GO:0005575, GO:0043231, GO:0016023, GO:0031410, GO:0044464, GO:0044444, GO:0005623, GO:0031988, GO:0030139, GO:0043229, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0031982
GO:0006434 [BP]seryl-tRNA aminoacylationprobableGO:0006139, GO:0019752, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0044281, GO:0034645, GO:0034660, GO:1901360, GO:0044267, GO:0044710, GO:0044260, GO:0006520, GO:0071704, GO:0010467, GO:1901576, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0043436, GO:0046483, GO:0016070, GO:0044238, GO:1901564, GO:0006082, GO:0019538, GO:0044237, GO:0043170, GO:0006399, GO:0043038, GO:0043039, GO:0006418, GO:0006412
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3VBB, chain A
Confidence level:very confident
Coverage over the Query: 19-225
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Template: 3VBB, chain A
Confidence level:very confident
Coverage over the Query: 193-229,246-471
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Template: 3V43, chain A
Confidence level:very confident
Coverage over the Query: 631-750
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Template: 2YSM, chain A
Confidence level:very confident
Coverage over the Query: 1030-1081
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Template: 2LQ6, chain A
Confidence level:probable
Coverage over the Query: 545-563,575-621
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Template: 2LQ6, chain A
Confidence level:probable
Coverage over the Query: 841-885
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Template: 3QO5, chain A
Confidence level:probable
Coverage over the Query: 16-224
View the alignment between query and template
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