Diaphorina citri psyllid: psy11698

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------
MPPWIRGMFLHYLPIVLLMKRPKKTRLRWMMEMPGMSVPPHPSYGSPAELPRHITPSAPSKSKMEVMELSDLHHPNCKINRKARVMELSDLHHPNCKINRKASTERRESESSDSLLLSPEASKATEAVEFIAEHLRSEDQYIQIREDWKYVAMVIDRLQLYIFFIVTTAGTLGILMDAPHIFEYVDQDRIIEIYRGK
ccHHHHHHHHHHHHHHHHccccccHHHHHHcccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHccc
*PPWIRGMFLHYLPIVLLMKRPKKTRLRWMMEMPGMSVPPHPSYGS*******************VMELSDLHHPNCKINR**********************************LLSPEASKATEAVEFIAEHLRSEDQYIQIREDWKYVAMVIDRLQLYIFFIVTTAGTLGILMDAPHIFEYVDQDRIIEIYRG*
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxx
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MPPWIRGMFLHYLPIVLLMKRPKKTRLRWMMEMPGMSVPPHPSYGSPAELPRHITPSAPSKSKMEVMELSDLHHPNCKINRKARVMELSDLHHPNCKINRKASTERRESESSDSLLLSPEASKATEAVEFIAEHLRSEDQYIQIREDWKYVAMVIDRLQLYIFFIVTTAGTLGILMDAPHIFEYVDQDRIIEIYRGK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Acetylcholine receptor subunit beta-like 1 After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane.confidentP04755

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0043005 [CC]neuron projectionprobableGO:0005575, GO:0097458, GO:0042995, GO:0044464, GO:0005623
GO:0045211 [CC]postsynaptic membraneprobableGO:0097060, GO:0044456, GO:0016020, GO:0005575, GO:0045202

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4AQ5, chain B
Confidence level:very confident
Coverage over the Query: 123-185
View the alignment between query and template
View the model in PyMOL