Diaphorina citri psyllid: psy11701


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-----
MVWQSRSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGGTKN
cEEEEEccccccccEEEEEEEEcCEEECcccccccEEEccccEEEEccccEEEEEEcccccccEEEEEEccccccccccEEEECcccEEEEccccccccCEEEEEEECccccEEEEEEEEEEECccccccccccEEEcccccEEEEEEECcccccEEEEEEccCEcccccccccEEEccccEEEccccccccCEEEEEEEEccCEEEEEEEEEEEECccCEECccccEEEEcccEEEEEEECccccccEEEEEEccCCcccccEEEcccccEEEccccccccEEEEEEEEcccccCEEEEEEEEccccccccccccEEEcccccEEEEEEEECcccccEEEEEEEccCEccccccccEEEccccEEEEccccccccEEEEEEEEcccccEEEEEEEEECcccccccccCEEEEEcccEEEEEEECcccccccccccEEEEEEECcccccccEEEEEEEccccCEEEEccccccccEEEEEEEEcccccccccccEEEcccccccccccCEEEEEccccEEEEEECccccccccccEEEEEEEEcccccccccEEEEEEEccccccEEEEcccccccEEEEEEEEEEccccccccccCECcccccccccEEEECcccCEEEEECccccccccccCEEEEEEEEEcccccccccEEEEcccccEEEEcccccccEEEEEEEEEcccccccccccEEEEEcccccccccccccccccEEEEEEEEcccccccccccEEEEcccccccc
MVWQSRSEYKIGNRILLNVIATGISA*************RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAP***RRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE**GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF**PE*****
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MVWQSRSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGGTKN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Neuroglian The long isoform may play a role in neural and glial cell adhesion in the developing embryo. The short isoform may be a more general cell adhesion molecule involved in other tissues and imaginal disk morphogenesis. Vital for embryonic development. Essential for septate junctions. Septate junctions, which are the equivalent of vertebrates tight junctions, are characterized by regular arrays of transverse structures that span the intermembrane space and form a physical barrier to diffusion. Required for the blood-brain barrier formation.confidentP20241

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0006935 [BP]chemotaxisprobableGO:0040011, GO:0042330, GO:0009605, GO:0050896, GO:0008150, GO:0042221
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0044304 [CC]main axonprobableGO:0044463, GO:0044464, GO:0005623, GO:0030424, GO:0005575, GO:0097458, GO:0043005, GO:0033267, GO:0042995
GO:0048666 [BP]neuron developmentprobableGO:0032502, GO:0048699, GO:0048856, GO:0007399, GO:0030182, GO:0009987, GO:0048869, GO:0030154, GO:0048468, GO:0044767, GO:0032501, GO:0044763, GO:0048731, GO:0008150, GO:0022008, GO:0007275, GO:0044699, GO:0044707
GO:0051179 [BP]localizationprobableGO:0008150
GO:0016043 [BP]cellular component organizationprobableGO:0008150, GO:0071840
GO:0005887 [CC]integral to plasma membraneprobableGO:0031226, GO:0016021, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459, GO:0031224
GO:0005911 [CC]cell-cell junctionprobableGO:0005575, GO:0030054
GO:0007156 [BP]homophilic cell adhesionprobableGO:0016337, GO:0009987, GO:0044763, GO:0007155, GO:0008150, GO:0022610, GO:0044699

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3V2A, chain R
Confidence level:very confident
Coverage over the Query: 34-127
View the alignment between query and template
View the model in PyMOL
Template: 3DMK, chain A
Confidence level:very confident
Coverage over the Query: 31-597
View the alignment between query and template
View the model in PyMOL
Template: 3T1W, chain A
Confidence level:very confident
Coverage over the Query: 401-732
View the alignment between query and template
View the model in PyMOL
Template: 3L5H, chain A
Confidence level:very confident
Coverage over the Query: 130-217,231-650,694-740
View the alignment between query and template
View the model in PyMOL