Diaphorina citri psyllid: psy11709


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470----
MTAVVQPPPVFIDLLLEDQALELRVYLKNLGAEISDEKSTKGIEDDLHKIIGVCDACFQDANEADIESVLNSIVSMLVLINPERAENLILAFSEKLSKASDAKLGPVTLRVLWLLFQSLEPTSPMRYHVYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKLLRLLHQALLASKQYRLLRMQTKSSLCSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMIQKELDLNPNQIEAFIIDGKIAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDLLNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMIQKELDLNPNQIEAFIID
cccccccccEEEcccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHHccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccCECcccccccHHHHccccccHHHHHHHHHcccHHHHHHHHHHcHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHcccHHHHHHHHHHcHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHcccccccccccccc
******P*PVFIDLLLEDQALELRVYLKNLGAEISD**STKGIEDDLHKIIGVCDACFQDANEADIESVLNSIVSMLVLINPERAENLILAFSEKLSKASDAKLGPVTLRVLWLLFQSLEPTSPMRYHVYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKLLRLLHQALLASKQYRLLRMQTKSSLCSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMIQKELDLNPNQIEAFIIDGKIAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDLLNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMIQKELDLNPNQIEAFIID
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MTAVVQPPPVFIDLLLEDQALELRVYLKNLGAEISDEKSTKGIEDDLHKIIGVCDACFQDANEADIESVLNSIVSMLVLINPERAENLILAFSEKLSKASDAKLGPVTLRVLWLLFQSLEPTSPMRYHVYYHLVQIAQNADQIKSVFKDVDHLKQQFSQCPPSNEQMQKLLRLLHQALLASKQYRLLRMQTKSSLCSKTELAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDLLNIFVAEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMIQKELDLNPNQIEAFIIDGKIAAKVMIELLSTYTAENASQAREDAQACILAALADPNTFLLHPLLTLKPVKFLEGELIHDLLNIFVSEKVNTYQDFYKQHKEYIVNKLGLDHQENLRKMRLLTFMQLAETKTEMSFDMIQKELDLNPNQIEAFIID

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Eukaryotic translation initiation factor 3 subunit M Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity). Required for constitutive protein secretion.confidentQ292F0
Eukaryotic translation initiation factor 3 subunit M Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.confidentQ7Q068
Eukaryotic translation initiation factor 3 subunit M Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity). Required for constitutive protein secretion.confidentQ7JVI3

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005794 [CC]Golgi apparatusprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005852 [CC]eukaryotic translation initiation factor 3 complexprobableGO:0043234, GO:0005737, GO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005875 [CC]microtubule associated complexprobableGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3CHM, chain A
Confidence level:very confident
Coverage over the Query: 222-347
View the alignment between query and template
View the model in PyMOL
Template: 3CHM, chain A
Confidence level:very confident
Coverage over the Query: 361-473
View the alignment between query and template
View the model in PyMOL
Template: 4B4T, chain O
Confidence level:confident
Coverage over the Query: 66-180,196-347
View the alignment between query and template
View the model in PyMOL
Template: 4B4T, chain O
Confidence level:confident
Coverage over the Query: 345-474
View the alignment between query and template
View the model in PyMOL