Diaphorina citri psyllid: psy11719

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------
MPQTVSNLPLQPSQSSGTLWLKAMCDALWLTAMCDALWLKAMCDTLWLTTMCDALWLKAMCDTLWLTTMCDALWLKAMCDTLWLTTMCDALWLKAMCDTLWLTTMCDALWLKAMCDTLWLTTMCDALWLKAMCDTLWLTTMCDALWLKAMCDTLWLTTMCDALWLTAMCLISLHISSLATNMLSKFKEILDTYLTDKVIIPDNHKKEITYQLGTFDSESVSVLLRFLPIYLETGDNRLLLLTPMVSELNPWSIHEPSYRVGPMPQTVSNLPLQPSQSSGTLWLKAMCDALWLTAMCDALWLTAMCDALWLKAMCDTLWLTTMCDALWLTAMSLHNEYIERHRKLYGRRLDYEERKRKREAREPHKRAEKARSVRKIKAKLYNKQRRNEKIQMKKKIKAHEEKLTKQKHEKKEEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWEVPIPKVRTQADAEVFKIVRSGKTKRKAWKRMITKVCFVGENFTRKPPKFERFIRPMALRFNKAHVTHPELKATFYLPIIGVKKNPNSPMYTNLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLYVLFGTKFSTFELSENDNVPDDTLTSRFQDLGRWLTPCGLVYLLFGTSSTAVNFEVNADPDIRSYKFK
ccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccECcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccEEccccHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEcccccHHHcccccccccccccccCCccccccccccccEEEEEEEEECccccccEEEEEEEEEEEcccccccccccccccccEEEEEcccccccccccEEEEEEEEEEccccccccCEEEEEEEEEccccccccccccccccccccccccccccccccccccEEEEEECccccEEEEEEcccccccccccc
**************SSGTLWLKAMCDALWLTAMCDALWLKAMCDTLWLTTMCDALWLKAMCDTLWLTTMCDALWLKAMCDTLWLTTMCDALWLKAMCDTLWLTTMCDALWLKAMCDTLWLTTMCDALWLKAMCDTLWLTTMCDALWLKAMCDTLWLTTMCDALWLTAMCLISLHISSLATNMLSKFKEILDTYLTDKVIIPDNHKKEITYQLGTFDSESVSVLLRFLPIYLETGDNRLLLLTPMVSELNPWSIHEPSYRVGPMPQTVSNLPLQPSQSSGTLWLKAMCDALWLTAMCDALWLTAMCDALWLKAMCDTLWLTTMCDALWLTAMSLHNEYIERHRKLYGRRLDYEER********************KIKAKLYNKQRRN*KI**************************PVYLLDRDVQSRAKV**************KWEVPIPKVRTQADAEVFKIVRSGKTKRKAWKRMITKVCFVGENFTRKPPKFERFIRPMALRFNKAHVTHPELKATFYLPIIGVKKNPNSPMYTNLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLYVLFGTKFSTFELSEN*******LTSRFQDLGRWLTPCGLVYLLFGTSSTAVNFEVNADPD**SYK**
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MPQTVSNLPLQPSQSSGTLWLKAMCDALWLTAMCDALWLKAMCDTLWLTTMCDALWLKAMCDTLWLTTMCDALWLKAMCDTLWLTTMCDALWLKAMCDTLWLTTMCDALWLKAMCDTLWLTTMCDALWLKAMCDTLWLTTMCDALWLKAMCDTLWLTTMCDALWLTAMCLISLHISSLATNMLSKFKEILDTYLTDKVIIPDNHKKEITYQLGTFDSESVSVLLRFLPIYLETGDNRLLLLTPMVSELNPWSIHEPSYRVGPMPQTVSNLPLQPSQSSGTLWLKAMCDALWLTAMCDALWLTAMCDALWLKAMCDTLWLTTMCDALWLTAMSLHNEYIERHRKLYGRRLDYEERKRKREAREPHKRAEKARSVRKIKAKLYxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWEVPIPKVRTQADAEVFKIVRSGKTKRKAWKRMITKVCFVGENFTRKPPKFERFIRPMALRFNKAHVTHPELKATFYLPIIGVKKNPNSPMYTNLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLYVLFGTKFSTFELSENDNVPDDTLTSRFQDLGRWLTPCGLVYLLFGTSSTAVNFEVNADPDIRSYKFK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Ribosome biogenesis protein NSA2 homolog Involved in the biogenesis of the 60S ribosomal subunit. May play a part in the quality control of pre-60S particles.confidentQ9CR47
Ribosome biogenesis protein NSA2 homolog Involved in the biogenesis of the 60S ribosomal subunit. May play a part in the quality control of pre-60S particles.confidentQ3SX11
Ribosome biogenesis protein NSA2 homolog Involved in the biogenesis of the 60S ribosomal subunit. May play a part in the quality control of pre-60S particles.confidentQ9QYU7

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0006364 [BP]rRNA processingprobableGO:0090304, GO:0034641, GO:0006807, GO:0034660, GO:1901360, GO:0006139, GO:0044260, GO:0042254, GO:0071704, GO:0010467, GO:0071840, GO:0022613, GO:0034470, GO:0009987, GO:0006725, GO:0008150, GO:0008152, GO:0046483, GO:0016070, GO:0044238, GO:0016072, GO:0044237, GO:0043170, GO:0044085, GO:0006396
GO:0030687 [CC]preribosome, large subunit precursorprobableGO:0032991, GO:0044464, GO:0030684, GO:0005623, GO:0030529, GO:0005575, GO:0044424, GO:0005622
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0006911 [BP]phagocytosis, engulfmentprobableGO:0009987, GO:0006909, GO:0016192, GO:0016044, GO:0071840, GO:0006810, GO:0010324, GO:0008150, GO:0061024, GO:0044765, GO:0044763, GO:0016043, GO:0006897, GO:0051234, GO:0051179, GO:0044699
GO:0022008 [BP]neurogenesisprobableGO:0032502, GO:0048856, GO:0044707, GO:0007399, GO:0048869, GO:0030154, GO:0008150, GO:0032501, GO:0044763, GO:0048731, GO:0009987, GO:0007275, GO:0044699

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2KCO, chain A
Confidence level:confident
Coverage over the Query: 496-590
View the alignment between query and template
View the model in PyMOL
Template: 4F61, chain I
Confidence level:probable
Coverage over the Query: 334-415,426-446
View the alignment between query and template
View the model in PyMOL