Diaphorina citri psyllid: psy11778


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320----
MSKLPILVTRPCLDCWGVSAITLPSPSLSSRSLKPSSSSLQSLSLSSPKPVLTLALRKRSGRSTGLQRPRRAELVYLESSPNYCERDLSLGSLGTAGRHCNRTSRGSREAAFTYAITSAGVTYAITSACSRGNISNCGCEIYRPRHRQRHRSGGAGSSDPASNWRHRSSGEPSSIGGAGELEPASNWKWGGCSVDIGFAMRYARQFLDSREIEGDARSLMNLHNNKAGRKMVKTLLQTECKCHGVSGSCTMKTCWRTLPPFKVIGDALMKKYWKARGMDGCDLMCCGRGYNTHQISRAWQCRCKFNWCCSVQCDTCAESVEVYT
cccccHHcccccccccccccccccccHHHHHHHHcccHHcccccccccccccccHHccccccccccccccccccEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccHHHHHHHHHHHHHccccccHHHHHHHcccccccccEEHHHccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccEEEEEEEEEEccEEEEEEEEEcccccEEEEECc
**KLPILVTRPCLDCWGVSAITLPSPSLSSRSLKPSSSSL*****************************RRAELVYLESSPNYCERDLSLGSLGTAGRHCNRTSRGSREAAFTYAITSAGVTYAITSACSRGNISNCGCEIYR*****************************************SNWKWGGCSVDIGFAMRYARQFLDSREIEGDARSLMNLHNNKAGRKMVKTLLQTECKCHGVSGSCTMKTCWRTLPPFKVIGDALMKKYWKARGMDGCDLMCCGRGYNTHQISRAWQCRCKFNWCCSVQCDTCAESVEVYT
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MSKLPILVTRPCLDCWGVSAITLPSPSLSSRSLKPSSSSLQSLSLSSPKPVLTLALRKRSGRSTGLQRPRRAELVYLESSPNYCERDLSLGSLGTAGRHCNRTSRGSREAAFTYAITSAGVTYAITSACSRGNISNCGCEIYRPRHRQRHRSGGAGSSDPASNWRHRSSGEPSSIGGAGELEPASNWKWGGCSVDIGFAMRYARQFLDSREIEGDARSLMNLHNNKAGRKMVKTLLQTECKCHGVSGSCTMKTCWRTLPPFKVIGDALMKKYWKARGMDGCDLMCCGRGYNTHQISRAWQCRCKFNWCCSVQCDTCAESVEVYT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein Wnt-2 Binds as a ligand to a family of frizzled seven-transmembrane receptors and acts through a cascade of genes on the nucleus. Segment polarity protein. May function in gonadogenesis and limb development. Wg and Wnt2 have a role in the developing trachea and together are responsible for all dorsal trunk formation.confidentP28465

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0007166 [BP]cell surface receptor signaling pathwayprobableGO:0044700, GO:0051716, GO:0050896, GO:0009987, GO:0050794, GO:0008150, GO:0065007, GO:0044763, GO:0007165, GO:0023052, GO:0007154, GO:0050789, GO:0044699
GO:0050793 [BP]regulation of developmental processprobableGO:0008150, GO:0065007, GO:0050789
GO:0010628 [BP]positive regulation of gene expressionprobableGO:0009893, GO:0019222, GO:0060255, GO:0050789, GO:0065007, GO:0048518, GO:0008150, GO:0010468, GO:0010604
GO:0048513 [BP]organ developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0044767 [BP]single-organism developmental processprobableGO:0032502, GO:0008150, GO:0044699

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 4F0A, chain B
Confidence level:very confident
Coverage over the Query: 46-145,179-324
View the alignment between query and template
View the model in PyMOL
Template: 4F0A, chain B
Confidence level:very confident
Coverage over the Query: 8-45,58-107
View the alignment between query and template
View the model in PyMOL