Psyllid ID: psy11778


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320----
MSKLPILVTRPCLDCWGVSAITLPSPSLSSRSLKPSSSSLQSLSLSSPKPVLTLALRKRSGRSTGLQRPRRAELVYLESSPNYCERDLSLGSLGTAGRHCNRTSRGSREAAFTYAITSAGVTYAITSACSRGNISNCGCEIYRPRHRQRHRSGGAGSSDPASNWRHRSSGEPSSIGGAGELEPASNWKWGGCSVDIGFAMRYARQFLDSREIEGDARSLMNLHNNKAGRKMVKTLLQTECKCHGVSGSCTMKTCWRTLPPFKVIGDALMKKYWKARGMDGCDLMCCGRGYNTHQISRAWQCRCKFNWCCSVQCDTCAESVEVYT
cccccHHccccccccccccccccccHHHHHHHHHHcHHHHccccccccccccccHHccccccccccccccccccEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccHHHHHHHHHHHHHccccccHHHHHHHcccccccccEEHHHccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccEEEEEEEEEEccEEEEEEEEEcccccEEEEEEc
cccccEEEcHHHHHHHHHHHHHHccccccccccccccccccHccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHEcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHcccccccHHHHHHHHHHHHHcccccccccccccccccccccccccEEcccccccHHHHHHHHHHHccHHccccHHHHHHHHccHHHHHHHHHHHHHHccccccccccEHHHHHHHcHHHHHHHHHHHHHHccccccccccccEccccccEEEEEEEEEEEEEEEEEEEEEEccEEEEEEEcc
msklpilvtrpcldcwgvsaitlpspslssrslkpsssslqslslsspkpvLTLALRKrsgrstglqrprraelvylesspnycerdlslgslgtagrhcnrtsrgsreAAFTYAITSAGVTYAITSAcsrgnisncgceiyrprhrqrhrsggagssdpasnwrhrssgepssiggagelepasnwkwggcsvDIGFAMRYARQFLDSREIEGDARSLMNLHNNKAGRKMVKTLLQTEckchgvsgsctmktcwrtlppfkvIGDALMKKYWKargmdgcdlmccgrgynthqisrawqcrckfnwccsvqcdtcaesvevyt
MSKLPILVTRPCLDCWGVSAITLPSPSLSSRSLKPsssslqslslsspkpvLTLAlrkrsgrstglqrprraelvylesspnyceRDLSLGSLGTAGRhcnrtsrgsreAAFTYAITSAGVTYAITSacsrgnisNCGCEIYRPRhrqrhrsggagssdpasnwrHRSSGEPSSIGGAGELEPASNWKWGGCSVDIGFAMRYARQFLDSREIEGDARSLMNLHNNKAGRKMVKTLLQTECKCHgvsgsctmktcwrTLPPFKVIGDALMKKYWKARGMDGCDLMCCGRGYNTHQISRAWQCRCKFNWCCSVQCDTCAESVEVYT
MSKLPILVTRPCLDCWGVSAITlpspslssrslkpsssslqslslsspkpVLTLALRKRSGRSTGLQRPRRAELVYLESSPNYCERDLSLGSLGTAGRHCNRTSRGSREAAFTYAITSAGVTYAITSACSRGNISNCGCEIYRPRHRQRHRSGGAGSSDPASNWRHRSSGEPSSIGGAGELEPASNWKWGGCSVDIGFAMRYARQFLDSREIEGDARSLMNLHNNKAGRKMVKTLLQTECKCHGVSGSCTMKTCWRTLPPFKVIGDALMKKYWKARGMDGCDLMCCGRGYNTHQISRAWQCRCKFNWCCSVQCDTCAESVEVYT
****PILVTRPCLDCWGVSAITL**************************************************LVYLE***NYCERDLSLGSLGTAGRHC*******REAAFTYAITSAGVTYAITSACSRGNISNCGCEIYR*****************************************SNWKWGGCSVDIGFAMRYARQFLDSREIEGDARSLMNLHNNKAGRKMVKTLLQTECKCHGVSGSCTMKTCWRTLPPFKVIGDALMKKYWKARGMDGCDLMCCGRGYNTHQISRAWQCRCKFNWCCSVQCDTCAESV****
**KL*ILVTRPCLDCWGVSAITLPSPSLSSRSLKPSSSSL*****************************RRAELVYLESSPNYCERDLSLGSLGTAGRHCNRTSRGSREAAFTYAITSAGVTYAITSACSRGNISNCGCE************************************************WGGCSVDIGFAMRYARQFLDSREIEGDARSLMNLHNNKAGRKMVKTLLQTECKCHGVSGSCTMKTCWRTLPPFKVIGDAL**KYWKARGMDGCDLMCCGRGYNTHQISRAWQCRCKFNWCCSVQCDTCAESVEVYT
MSKLPILVTRPCLDCWGVSAITLPS*********************SPKPVLTLALR***********PRRAELVYLESSPNYCERDLSLGSLGTAGRHCNRTSRGSREAAFTYAITSAGVTYAITSACSRGNISNCGCEIYRPRH*****************************GGAGELEPASNWKWGGCSVDIGFAMRYARQFLDSREIEGDARSLMNLHNNKAGRKMVKTLLQTECKCHGVSGSCTMKTCWRTLPPFKVIGDALMKKYWKARGMDGCDLMCCGRGYNTHQISRAWQCRCKFNWCCSVQCDTCAESVEVYT
**KLPILVTRPCLDCWGVSAITLPSPSLSSRSLKPSSSSLQSLSLSSPKPVLTLALRKRSGRSTGLQRPRRAELVYLESSPNYCERDLSLGSLGTAGRHCNRTSRGSREAAFTYAITSAGVTYAITSACSRGNISNCGCEIYRPRHRQRHRSGGAGSSDPASNWR*******************SNWKWGGCSVDIGFAMRYARQFLDSREIEGDARSLMNLHNNKAGRKMVKTLLQTECKCHGVSGSCTMKTCWRTLPPFKVIGDALMKKYWKARGMDGCDLMCCGRGYNTHQISRAWQCRCKFNWCCSVQCDTCAESVEVYT
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SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSKLPILVTRPCLDCWGVSAITLPSPSLSSRSLKPSSSSLQSLSLSSPKPVLTLALRKRSGRSTGLQRPRRAELVYLESSPNYCERDLSLGSLGTAGRHCNRTSRGSREAAFTYAITSAGVTYAITSACSRGNISNCGCEIYRPRHRQRHRSGGAGSSDPASNWRHRSSGEPSSIGGAGELEPASNWKWGGCSVDIGFAMRYARQFLDSREIEGDARSLMNLHNNKAGRKMVKTLLQTECKCHGVSGSCTMKTCWRTLPPFKVIGDALMKKYWKARGMDGCDLMCCGRGYNTHQISRAWQCRCKFNWCCSVQCDTCAESVEVYT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query324 2.2.26 [Sep-21-2011]
Q92048350 Protein Wnt-2 OS=Danio re yes N/A 0.577 0.534 0.370 4e-42
P56706349 Protein Wnt-7b OS=Homo sa yes N/A 0.484 0.449 0.448 7e-41
P28465352 Protein Wnt-2 OS=Drosophi yes N/A 0.435 0.400 0.543 9e-41
P28047349 Protein Wnt-7b OS=Mus mus yes N/A 0.410 0.381 0.491 3e-40
Q3L254349 Protein Wnt-7b OS=Gallus yes N/A 0.410 0.381 0.497 3e-40
Q1KYK9349 Protein Wnt-7a OS=Macaca N/A N/A 0.419 0.389 0.482 2e-39
Q1KYL3349 Protein Wnt-7a OS=Chloroc N/A N/A 0.419 0.389 0.482 2e-39
Q1KYK5349 Protein Wnt-7a OS=Pongo p N/A N/A 0.419 0.389 0.482 2e-39
Q1KYL1349 Protein Wnt-7a OS=Pan tro no N/A 0.419 0.389 0.482 2e-39
O00755349 Protein Wnt-7a OS=Homo sa no N/A 0.419 0.389 0.482 2e-39
>sp|Q92048|WNT2_DANRE Protein Wnt-2 OS=Danio rerio GN=wnt2 PE=2 SV=1 Back     alignment and function desciption
 Score =  172 bits (435), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/278 (37%), Positives = 137/278 (49%), Gaps = 91/278 (32%)

Query: 105 RGSREAAFTYAITSAGVTYAITSACSRGNISNCGCEIYRPRHRQRHRSGGAGSSDPASNW 164
           R SREAAF YAI+SAG+ Y +T ACS+G + NC C+            G  GSS  A   
Sbjct: 101 RSSREAAFVYAISSAGMVYTLTRACSQGELENCSCD-----------PGKKGSSRDAK-- 147

Query: 165 RHRSSGEPSSIGGAGELEPASNWKWGGCSVDIGFAMRYARQFLDSRE-IEGDARSLMNLH 223
                       GA        + WGGCS  +  A+++ + F+D++E  E DAR+LMNLH
Sbjct: 148 ------------GA--------FDWGGCSDHVDHAIKFTQVFIDAKERKERDARALMNLH 187

Query: 224 NNKAGRKMVKTLLQTECKCHGVSGSCTMKTCWRTLPPFKVIGD-----------ALMKKY 272
           NN+AGRK VK  +  ECKCHGVSGSC ++TCW  +  F+  GD            +M +Y
Sbjct: 188 NNRAGRKAVKRFMNLECKCHGVSGSCNVRTCWLAMADFRQTGDYLRKKYNNAIQVVMNQY 247

Query: 273 ------------------------------WK----------------ARGMDGCDLMCC 286
                                         W                 +RG D C++MCC
Sbjct: 248 GTGFTSAYRMLKRPNKNDLVYFEDSPDYCIWDHESGSVGTGGRVCNRTSRGTDSCEVMCC 307

Query: 287 GRGYNTHQISRAWQCRCKFNWCCSVQCDTCAESVEVYT 324
           GRGY+T ++SR  +C CKF WCC+V C  C E V+V+T
Sbjct: 308 GRGYDTSRVSRTTKCECKFQWCCAVHCRDCQEEVDVHT 345




Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule which affects the development of discrete regions of tissues. Is likely to signal over only few cell diameters.
Danio rerio (taxid: 7955)
>sp|P56706|WNT7B_HUMAN Protein Wnt-7b OS=Homo sapiens GN=WNT7B PE=1 SV=2 Back     alignment and function description
>sp|P28465|WNT2_DROME Protein Wnt-2 OS=Drosophila melanogaster GN=Wnt2 PE=2 SV=2 Back     alignment and function description
>sp|P28047|WNT7B_MOUSE Protein Wnt-7b OS=Mus musculus GN=Wnt7b PE=1 SV=1 Back     alignment and function description
>sp|Q3L254|WNT7B_CHICK Protein Wnt-7b OS=Gallus gallus GN=WNT7B PE=2 SV=1 Back     alignment and function description
>sp|Q1KYK9|WNT7A_MACFA Protein Wnt-7a OS=Macaca fascicularis GN=WNT7A PE=3 SV=1 Back     alignment and function description
>sp|Q1KYL3|WNT7A_CHLAE Protein Wnt-7a OS=Chlorocebus aethiops GN=WNT7A PE=3 SV=1 Back     alignment and function description
>sp|Q1KYK5|WNT7A_PONPY Protein Wnt-7a OS=Pongo pygmaeus GN=WNT7A PE=3 SV=1 Back     alignment and function description
>sp|Q1KYL1|WNT7A_PANTR Protein Wnt-7a OS=Pan troglodytes GN=WNT7A PE=3 SV=1 Back     alignment and function description
>sp|O00755|WNT7A_HUMAN Protein Wnt-7a OS=Homo sapiens GN=WNT7A PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query324
340714694404 PREDICTED: protein Wnt-7b-like [Bombus t 0.419 0.336 0.625 4e-52
345498226418 PREDICTED: protein Wnt-7b-like [Nasonia 0.425 0.330 0.614 5e-52
380011522406 PREDICTED: protein Wnt-7b-like [Apis flo 0.425 0.339 0.614 1e-51
350426998304 PREDICTED: protein Wnt-7b-like, partial 0.416 0.444 0.623 2e-51
383859345404 PREDICTED: protein Wnt-7b-like [Megachil 0.419 0.336 0.619 2e-51
307209863305 Protein Wnt-7a [Harpegnathos saltator] 0.422 0.449 0.629 2e-51
328775861404 PREDICTED: protein Wnt-7b [Apis mellifer 0.419 0.336 0.614 2e-51
322799259273 hypothetical protein SINV_00245 [Solenop 0.425 0.505 0.619 2e-51
332016312 508 Protein Wnt-7b [Acromyrmex echinatior] 0.425 0.271 0.619 5e-51
270011105 484 hypothetical protein TcasGA2_TC010155 [T 0.419 0.280 0.604 6e-49
>gi|340714694|ref|XP_003395861.1| PREDICTED: protein Wnt-7b-like [Bombus terrestris] Back     alignment and taxonomy information
 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 107/171 (62%), Positives = 126/171 (73%), Gaps = 35/171 (20%)

Query: 106 GSREAAFTYAITSAGVTYAITSACSRGNISNCGCEIYRPRHRQRHRSGGAGSSDPASNWR 165
           GSREAAFTYAI+SAGVTYA+T+ACSRGNI+ CGCE   P  R+                 
Sbjct: 100 GSREAAFTYAISSAGVTYAVTAACSRGNITACGCE---PTVRK----------------- 139

Query: 166 HRSSGEPSSIGGAGELEPASNWKWGGCSVDIGFAMRYARQFLDSREIEGDARSLMNLHNN 225
                         EL PA+ W+WGGCS D+ + MR+AR+FLD+RE+EGDARSLMNLHNN
Sbjct: 140 --------------EL-PANGWEWGGCSADVTYGMRFARRFLDAREVEGDARSLMNLHNN 184

Query: 226 KAGRKMVKTLLQTECKCHGVSGSCTMKTCWRTLPPFKVIGDALMKKYWKAR 276
           KAGRK+VK LLQTECKCHGVSGSCT++TCWRTLP F+ IGDALMKKY++AR
Sbjct: 185 KAGRKIVKALLQTECKCHGVSGSCTVRTCWRTLPSFRQIGDALMKKYYRAR 235




Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345498226|ref|XP_001606342.2| PREDICTED: protein Wnt-7b-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|380011522|ref|XP_003689851.1| PREDICTED: protein Wnt-7b-like [Apis florea] Back     alignment and taxonomy information
>gi|350426998|ref|XP_003494614.1| PREDICTED: protein Wnt-7b-like, partial [Bombus impatiens] Back     alignment and taxonomy information
>gi|383859345|ref|XP_003705155.1| PREDICTED: protein Wnt-7b-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|307209863|gb|EFN86642.1| Protein Wnt-7a [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|328775861|ref|XP_395388.4| PREDICTED: protein Wnt-7b [Apis mellifera] Back     alignment and taxonomy information
>gi|322799259|gb|EFZ20650.1| hypothetical protein SINV_00245 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|332016312|gb|EGI57225.1| Protein Wnt-7b [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|270011105|gb|EFA07553.1| hypothetical protein TcasGA2_TC010155 [Tribolium castaneum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query324
UNIPROTKB|A8K0G1353 WNT7B "Protein Wnt" [Homo sapi 0.290 0.266 0.574 7.3e-67
UNIPROTKB|B8A595333 WNT7B "Protein Wnt-7b" [Homo s 0.290 0.282 0.574 7.3e-67
UNIPROTKB|P56706349 WNT7B "Protein Wnt-7b" [Homo s 0.290 0.269 0.574 7.3e-67
UNIPROTKB|I3LVH1325 WNT7B "Protein Wnt" [Sus scrof 0.290 0.289 0.563 1.9e-66
MGI|MGI:98962349 Wnt7b "wingless-related MMTV i 0.290 0.269 0.563 1.9e-66
RGD|1311441349 Wnt7b "wingless-type MMTV inte 0.290 0.269 0.563 1.9e-66
UNIPROTKB|E9PU66353 Wnt7b "Protein Wnt" [Rattus no 0.290 0.266 0.563 1.9e-66
UNIPROTKB|F1MBQ6259 LOC100337066 "Protein Wnt" [Bo 0.290 0.362 0.553 3.9e-66
UNIPROTKB|F1NJN0325 WNT7B "Protein Wnt" [Gallus ga 0.290 0.289 0.574 6.4e-66
UNIPROTKB|F1NX59348 WNT7B "Protein Wnt" [Gallus ga 0.290 0.270 0.574 6.4e-66
UNIPROTKB|A8K0G1 WNT7B "Protein Wnt" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
 Score = 325 (119.5 bits), Expect = 7.3e-67, Sum P(3) = 7.3e-67
 Identities = 54/94 (57%), Positives = 72/94 (76%)

Query:   179 GELEPASNWKWGGCSVDIGFAMRYARQFLDSREIEGDARSLMNLHNNKAGRKMVKTLLQT 238
             G    A  WKWGGCS D+ + + ++R+F+D+REI+ +AR LMNLHNN+AGRK+++  +Q 
Sbjct:   143 GYYNQAEGWKWGGCSADVRYGIDFSRRFVDAREIKKNARRLMNLHNNEAGRKVLEDRMQL 202

Query:   239 ECKCHGVSGSCTMKTCWRTLPPFKVIGDALMKKY 272
             ECKCHGVSGSCT KTCW TLP F+ +G  L +KY
Sbjct:   203 ECKCHGVSGSCTTKTCWTTLPKFREVGHLLKEKY 236


GO:0005102 "receptor binding" evidence=IEA
GO:0007275 "multicellular organismal development" evidence=IEA
GO:0016055 "Wnt receptor signaling pathway" evidence=IEA
GO:0005578 "proteinaceous extracellular matrix" evidence=IEA
UNIPROTKB|B8A595 WNT7B "Protein Wnt-7b" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P56706 WNT7B "Protein Wnt-7b" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|I3LVH1 WNT7B "Protein Wnt" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:98962 Wnt7b "wingless-related MMTV integration site 7B" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1311441 Wnt7b "wingless-type MMTV integration site family, member 7B" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E9PU66 Wnt7b "Protein Wnt" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1MBQ6 LOC100337066 "Protein Wnt" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1NJN0 WNT7B "Protein Wnt" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NX59 WNT7B "Protein Wnt" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P28465WNT2_DROMENo assigned EC number0.54380.43510.4005yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query324
pfam00110308 pfam00110, wnt, wnt family 1e-68
smart00097305 smart00097, WNT1, found in Wnt-1 2e-58
pfam00110308 pfam00110, wnt, wnt family 1e-22
smart00097305 smart00097, WNT1, found in Wnt-1 2e-19
pfam00110308 pfam00110, wnt, wnt family 1e-14
smart00097305 smart00097, WNT1, found in Wnt-1 2e-11
>gnl|CDD|215724 pfam00110, wnt, wnt family Back     alignment and domain information
 Score =  215 bits (551), Expect = 1e-68
 Identities = 84/172 (48%), Positives = 108/172 (62%), Gaps = 35/172 (20%)

Query: 104 SRGSREAAFTYAITSAGVTYAITSACSRGNISNCGCEIYRPRHRQRHRSGGAGSSDPASN 163
            RG+RE AF YAI+SAGV +A+T ACS GN+ +CGC+        R R G +G       
Sbjct: 62  KRGTRETAFVYAISSAGVVHAVTRACSEGNLESCGCD--------RSRRGRSGPGG---- 109

Query: 164 WRHRSSGEPSSIGGAGELEPASNWKWGGCSVDIGFAMRYARQFLDSREIEGDARSLMNLH 223
                                  W+WGGCS +I F +R++R+FLD+RE   DAR+LMNLH
Sbjct: 110 -----------------------WEWGGCSDNIKFGIRFSREFLDARERGRDARALMNLH 146

Query: 224 NNKAGRKMVKTLLQTECKCHGVSGSCTMKTCWRTLPPFKVIGDALMKKYWKA 275
           NN+AGRK VK  ++TECKCHGVSGSCT+KTCW+ LP F+ +GD L +KY  A
Sbjct: 147 NNEAGRKAVKRNMKTECKCHGVSGSCTLKTCWKQLPDFREVGDLLKEKYDGA 198


Wnt genes have been identified in vertebrates and invertebrates but not in plants, unicellular eukaryotes or prokaryotes. In humans, 19 WNT proteins are known. Because of their insolubility little is known about Wnt protein structure, but all have 23 or 24 Cys residues whose spacing is highly conserved. Signal transduction by Wnt proteins (including the Wnt/beta-catenin, the Wnt/Ca++, and the Wnt/polarity pathway) is mediated by receptors of the Frizzled and LDL-receptor-related protein (LRP) families. Length = 308

>gnl|CDD|128408 smart00097, WNT1, found in Wnt-1 Back     alignment and domain information
>gnl|CDD|215724 pfam00110, wnt, wnt family Back     alignment and domain information
>gnl|CDD|128408 smart00097, WNT1, found in Wnt-1 Back     alignment and domain information
>gnl|CDD|215724 pfam00110, wnt, wnt family Back     alignment and domain information
>gnl|CDD|128408 smart00097, WNT1, found in Wnt-1 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 324
KOG3913|consensus356 100.0
smart00097305 WNT1 found in Wnt-1. 100.0
PF00110310 wnt: wnt family; InterPro: IPR005817 Wnt proteins 100.0
KOG3913|consensus356 99.92
smart00097305 WNT1 found in Wnt-1. 99.87
PF00110310 wnt: wnt family; InterPro: IPR005817 Wnt proteins 99.82
>KOG3913|consensus Back     alignment and domain information
Probab=100.00  E-value=5.5e-84  Score=620.33  Aligned_cols=226  Identities=52%  Similarity=1.032  Sum_probs=200.5

Q ss_pred             hhhhhccCCCCCCCCCCCCceEEeecCCCccccCcCCCCCCCCCCcccccCCCCcchhhHHHHHHHHHHHHHHhhccCCC
Q psy11778         54 LALRKRSGRSTGLQRPRRAELVYLESSPNYCERDLSLGSLGTAGRHCNRTSRGSREAAFTYAITSAGVTYAITSACSRGN  133 (324)
Q Consensus        54 ~~~s~~~g~~~~~~~~~~~~LvYle~SPdyC~~~~~~g~~GT~GR~Cn~ts~GtREtAfv~Ai~sAgv~~~vtraCs~G~  133 (324)
                      ++.++..|++.+++++..|   |.... |+|.......++   |   ..++.|+||+||||||+||||+|+|||||++|+
T Consensus        68 ~~~sv~~G~~~~i~ECq~Q---Fr~~R-WNCs~~~~~~~~---g---~~l~~g~REsAFv~AIssAgV~havtraCs~G~  137 (356)
T KOG3913|consen   68 VMPSVAEGAREGIQECQFQ---FRFRR-WNCSTLDQLPVF---G---PLLSRGTRETAFVYAISSAGVAHAVTRACSQGN  137 (356)
T ss_pred             hHHHHHHHHHHHHHHHHHH---HHhhc-cCCCCCcccccc---c---hhhcccchHHHHHHHHHHhHHHHHHHHHhcCCC
Confidence            4556666777788898886   54444 456543222333   2   347889999999999999999999999999999


Q ss_pred             CCcccCCCCCccccccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhccchhhc
Q psy11778        134 ISNCGCEIYRPRHRQRHRSGGAGSSDPASNWRHRSSGEPSSIGGAGELEPASNWKWGGCSVDIGFAMRYARQFLDSREIE  213 (324)
Q Consensus       134 l~~CgC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WgGCsdnv~~G~~~sk~Fld~~e~~  213 (324)
                      |+.||||.. ++                                 + ...+++|+||||||||+||++|||.|||++|+.
T Consensus       138 l~~CgCd~~-~~---------------------------------~-~~~~~~w~WGGCsDnv~fG~~fsr~FlD~re~~  182 (356)
T KOG3913|consen  138 LESCGCDPS-PN---------------------------------G-KSGPEGWEWGGCSDNVDFGIRFSRKFLDAREKR  182 (356)
T ss_pred             CCCcCCCCC-CC---------------------------------C-CCCCCCccccCCCCchHHHHHHHHHhccccccc
Confidence            999999977 43                                 0 223456999999999999999999999999999


Q ss_pred             cchhHHHHhhhhhhhHHHHHhccccceeecCCCCCcccceecccCCCchHHHHHHHHHHhcc------------------
Q psy11778        214 GDARSLMNLHNNKAGRKMVKTLLQTECKCHGVSGSCTMKTCWRTLPPFKVIGDALMKKYWKA------------------  275 (324)
Q Consensus       214 ~~~~~~mnlHNn~aGR~av~~~~~~~CkCHG~SGSC~~ktCw~~l~~f~~vg~~Lk~ky~~A------------------  275 (324)
                      +|++++||||||+|||+||.++|+++||||||||||++||||++||+|++||++||+|||+|                  
T Consensus       183 ~d~r~lmnlHNNeaGR~av~~~m~~~CKCHGvSGSC~~KTCW~~lp~Fr~vG~~Lk~KYd~A~~V~~~~~~~~~~~~~~~  262 (356)
T KOG3913|consen  183 KDARALMNLHNNEAGRKAVKKNMRRECKCHGVSGSCTVKTCWKQLPDFREVGDYLKEKYDGAIKVTVNNRGRRSAPALRP  262 (356)
T ss_pred             cCHHHHHHHhhhHHHHHHHHHhhhhcccccCccccchhhhHHhhCccHHHHHHHHHHHhhhheEEeeccCCccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999                  


Q ss_pred             -------------------------------------------CCCCCccccccCCCeeeEEEEEEEeecceEEeeeEEE
Q psy11778        276 -------------------------------------------RGMDGCDLMCCGRGYNTHQISRAWQCRCKFNWCCSVQ  312 (324)
Q Consensus       276 -------------------------------------------~g~~~C~~lCCGrG~~t~~~~~~~~C~CkF~WCC~V~  312 (324)
                                                                 .|+|+|++|||||||+|++++++|+|||||||||+|+
T Consensus       263 ~~~~~~~~~~~dLVYle~SPdfC~~~~~~Gs~GT~GR~Cn~ts~g~dgC~~LCCGRGynt~~~~~~e~C~CkFhWCC~V~  342 (356)
T KOG3913|consen  263 EKPRFKPPTETDLVYLEDSPDYCERNKKTGSLGTQGRECNKTSRGSDGCDLLCCGRGYNTRRVEVVERCHCKFHWCCYVK  342 (356)
T ss_pred             cccccCCCCCCceEEecCCChhhccCccCCCCCCCCcccCCCCCCCCCCccccCCCCCceeEEEEEEecCCEEEEeeEEE
Confidence                                                       5679999999999999999999999999999999999


Q ss_pred             CcccceEEEEEC
Q psy11778        313 CDTCAESVEVYT  324 (324)
Q Consensus       313 C~~C~~~~~~~~  324 (324)
                      |++|++++++|+
T Consensus       343 C~~C~~~~~v~t  354 (356)
T KOG3913|consen  343 CKECRERVEVYT  354 (356)
T ss_pred             CcccccEEEeee
Confidence            999999999996



>smart00097 WNT1 found in Wnt-1 Back     alignment and domain information
>PF00110 wnt: wnt family; InterPro: IPR005817 Wnt proteins constitute a large family of secreted molecules that are involved in intercellular signalling during development Back     alignment and domain information
>KOG3913|consensus Back     alignment and domain information
>smart00097 WNT1 found in Wnt-1 Back     alignment and domain information
>PF00110 wnt: wnt family; InterPro: IPR005817 Wnt proteins constitute a large family of secreted molecules that are involved in intercellular signalling during development Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query324
4f0a_B316 Crystal Structure Of Xwnt8 In Complex With The Cyst 5e-29
>pdb|4F0A|B Chain B, Crystal Structure Of Xwnt8 In Complex With The Cysteine-Rich Domain Of Frizzled 8 Length = 316 Back     alignment and structure

Iteration: 1

Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 70/173 (40%), Positives = 95/173 (54%), Gaps = 35/173 (20%) Query: 107 SREAAFTYAITSAGVTYAITSACSRGNISNCGCEIYRPRHRQRHRSGGAGSSDPASNWRH 166 +RE +F +AI+SAGV Y +T CS G+ NCGC D + N R Sbjct: 61 TRETSFVHAISSAGVMYTLTRNCSMGDFDNCGC-------------------DDSRNGR- 100 Query: 167 RSSGEPSSIGGAGELEPASNWKWGGCSVDIGFAMRYARQFLDSREIEGDARSLMNLHNNK 226 IGG G W WGGCS + F R ++ F+D E DAR+LMNLHNN+ Sbjct: 101 --------IGGRG-------WVWGGCSDNAEFGERISKLFVDGLETGQDARALMNLHNNE 145 Query: 227 AGRKMVKTLLQTECKCHGVSGSCTMKTCWRTLPPFKVIGDALMKKYWKARGMD 279 AGR VK ++ CKCHG+SGSC+++TCW L F+ IG+ L K+ +A ++ Sbjct: 146 AGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLE 198

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query324
4f0a_B316 Protein WNT-8, XWNT-8; WNT signaling, ligand-recep 5e-31
4f0a_B316 Protein WNT-8, XWNT-8; WNT signaling, ligand-recep 2e-08
>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis} Length = 316 Back     alignment and structure
 Score =  118 bits (295), Expect = 5e-31
 Identities = 64/172 (37%), Positives = 88/172 (51%), Gaps = 35/172 (20%)

Query: 108 REAAFTYAITSAGVTYAITSACSRGNISNCGCEIYRPRHRQRHRSGGAGSSDPASNWRHR 167
           RE +F +AI+SAGV Y +T  CS G+  NCGC+  R                        
Sbjct: 62  RETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNGRI-------------------- 101

Query: 168 SSGEPSSIGGAGELEPASNWKWGGCSVDIGFAMRYARQFLDSREIEGDARSLMNLHNNKA 227
                              W WGGCS +  F  R ++ F+D  E   DAR+LMNLHNN+A
Sbjct: 102 ---------------GGRGWVWGGCSDNAEFGERISKLFVDGLETGQDARALMNLHNNEA 146

Query: 228 GRKMVKTLLQTECKCHGVSGSCTMKTCWRTLPPFKVIGDALMKKYWKARGMD 279
           GR  VK  ++  CKCHG+SGSC+++TCW  L  F+ IG+ L  K+ +A  ++
Sbjct: 147 GRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLE 198


>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis} Length = 316 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query324
4f0a_B316 Protein WNT-8, XWNT-8; WNT signaling, ligand-recep 100.0
4f0a_B316 Protein WNT-8, XWNT-8; WNT signaling, ligand-recep 99.9
>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis} Back     alignment and structure
Probab=100.00  E-value=8.2e-82  Score=603.74  Aligned_cols=242  Identities=37%  Similarity=0.751  Sum_probs=206.3

Q ss_pred             hhcccccccCCCCchhhhhhhccCCCCCCCCCCCCceEEeecCCCccccCcCCCCCCCCCCcccccCCCCcchhhHHHHH
Q psy11778         38 SSLQSLSLSSPKPVLTLALRKRSGRSTGLQRPRRAELVYLESSPNYCERDLSLGSLGTAGRHCNRTSRGSREAAFTYAIT  117 (324)
Q Consensus        38 d~A~~V~~s~~~~~~~~~~s~~~g~~~~~~~~~~~~LvYle~SPdyC~~~~~~g~~GT~GR~Cn~ts~GtREtAfv~Ai~  117 (324)
                      |++.++.+++++.++.++.++..|+++++.+++.|   |-+ ..|+|.....  ..+  +.  ..+..|+||+||||||+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~v~~Ga~~~i~ECq~Q---Fr~-~RWNCs~~~~--~~~--~~--~~l~~g~REtAFv~Ais   71 (316)
T 4f0a_B            2 WSVNNFLMTGPKAYLTYSASVAVGAQNGIEECKYQ---FAW-ERWNCPESTL--QLA--TH--NGLRSATRETSFVHAIS   71 (316)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHHHHHH---TTT-SSSCCCCCTT--HHH--HC--TTCCSCCHHHHHHHHHH
T ss_pred             ccHHHHHHhCCccChHHHHHHHHHHHHHHHHHHHH---hcC-CCcCCCCCcc--ccC--Cc--ccccCCCHHHHHHHHHH
Confidence            56788889999887778888888988888999887   433 5667863210  000  00  24778999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCcccCCCCCccccccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCccccCCCCChH
Q psy11778        118 SAGVTYAITSACSRGNISNCGCEIYRPRHRQRHRSGGAGSSDPASNWRHRSSGEPSSIGGAGELEPASNWKWGGCSVDIG  197 (324)
Q Consensus       118 sAgv~~~vtraCs~G~l~~CgC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WgGCsdnv~  197 (324)
                      ||||+|+||+||++|+|..|+||.. ++                                 + ...+++|+||||||||.
T Consensus        72 sAgv~~avtraCs~G~l~~C~Cd~~-~~---------------------------------~-~~~~~~w~WgGCsdnv~  116 (316)
T 4f0a_B           72 SAGVMYTLTRNCSMGDFDNCGCDDS-RN---------------------------------G-RIGGRGWVWGGCSDNAE  116 (316)
T ss_dssp             HHHHHHHHHHHHHTTTCSSCCCCCT-TT---------------------------------T-SEEETTEEECSCCCCHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCCC-CC---------------------------------C-CCcccCceeCCccchhH
Confidence            9999999999999999999999876 33                                 0 11135799999999999


Q ss_pred             HHHHHHHHhccchhhccchhHHHHhhhhhhhHHHHHhccccceeecCCCCCcccceecccCCCchHHHHHHHHHHhcc--
Q psy11778        198 FAMRYARQFLDSREIEGDARSLMNLHNNKAGRKMVKTLLQTECKCHGVSGSCTMKTCWRTLPPFKVIGDALMKKYWKA--  275 (324)
Q Consensus       198 ~G~~~sk~Fld~~e~~~~~~~~mnlHNn~aGR~av~~~~~~~CkCHG~SGSC~~ktCw~~l~~f~~vg~~Lk~ky~~A--  275 (324)
                      ||++||+.|+|++|.++|++++||||||+|||+||.++|+++||||||||||++||||++||+|++||+.||+||++|  
T Consensus       117 ~G~~fsr~F~D~~e~~~d~r~lmnlHNn~aGR~~v~~~m~~~CKCHGvSGSCt~KTCW~~lp~Fr~VG~~LK~kyd~A~~  196 (316)
T 4f0a_B          117 FGERISKLFVDGLETGQDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALK  196 (316)
T ss_dssp             HHHHHHHHHHHHHCCSSSHHHHHHHHHHHHHHHHHHHTCEEEEEECSGGGCTTSEEEEEECCCHHHHHHHHHHHHHTCEE
T ss_pred             HHHHHHHHHhccccccccHHHHHHhhchHHHHHHHHhcCeeeeecCCccccccceehcccCCCHHHHHHHHHHHhhhheE
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999887  


Q ss_pred             --------------------------------------------------------------CCC-----CCccccc--c
Q psy11778        276 --------------------------------------------------------------RGM-----DGCDLMC--C  286 (324)
Q Consensus       276 --------------------------------------------------------------~g~-----~~C~~lC--C  286 (324)
                                                                                    .|.     |||++||  |
T Consensus       197 V~~~~~~~~~~~~~~~~~~~~~~~k~p~~~dLVYle~SPdfC~~n~~~Gs~GT~GR~Cn~tS~g~s~~~~dgCdlLC~~C  276 (316)
T 4f0a_B          197 LEMDKRKMRSGNSADNRGAIADAFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKNLSQWERRSCKRLCTDC  276 (316)
T ss_dssp             CCC-------------CHHHHHHHHTSCSSSCEECSCCCCTTSEETTTTEECSTTCEECCCCTTCCHHHHTHHHHHTGGG
T ss_pred             eeecccccccccccccccccccccCCCCCCCeEEeCCCCcccccCCCCCCCCCCCcccCCCCCCCcCCCCCCHHHHHHhc
Confidence                                                                          344     8999999  9


Q ss_pred             CCCeeeEEEEEEEeecceEEeeeEEECcccceEEEEEC
Q psy11778        287 GRGYNTHQISRAWQCRCKFNWCCSVQCDTCAESVEVYT  324 (324)
Q Consensus       287 GrG~~t~~~~~~~~C~CkF~WCC~V~C~~C~~~~~~~~  324 (324)
                      ||||+|++++++|+|||||||||+|+|++|.+++++|+
T Consensus       277 GRGy~t~~~~~~erC~CkF~WCC~V~C~~C~~~~~~~~  314 (316)
T 4f0a_B          277 GLRVEEKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHF  314 (316)
T ss_dssp             TCCEEEEEEEEEEECSCBCCSSSCCBCCEEEEEEEEEE
T ss_pred             CCceeEEEEEEEEeeCCEEEeeeEEECCcCCeEEEEEE
Confidence            99999999999999999999999999999999999985



>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00