Diaphorina citri psyllid: psy11819


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-
MCQDDVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQECCV
ccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHcHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHcccccHHHHHccccccccccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccccHHHHHHHccccHHHHcccc
*****VSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQECCV
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MCQDDVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQECCV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1N0Q, chain A
Confidence level:very confident
Coverage over the Query: 495-586
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View the model in PyMOL
Template: 1N0Q, chain A
Confidence level:very confident
Coverage over the Query: 528-618
View the alignment between query and template
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Template: 1N0R, chain A
Confidence level:very confident
Coverage over the Query: 461-586
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Template: 3B7B, chain A
Confidence level:very confident
Coverage over the Query: 391-615
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Template: 3B7B, chain A
Confidence level:very confident
Coverage over the Query: 421-644
View the alignment between query and template
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Template: 2ZGD, chain A
Confidence level:very confident
Coverage over the Query: 154-242
View the alignment between query and template
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Template: 1WDY, chain A
Confidence level:very confident
Coverage over the Query: 289-320,393-627
View the alignment between query and template
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Template: 3UTM, chain A
Confidence level:very confident
Coverage over the Query: 155-311,397-424,458-583
View the alignment between query and template
View the model in PyMOL
Template: 2F8X, chain K
Confidence level:probable
Coverage over the Query: 119-123,137-326
View the alignment between query and template
View the model in PyMOL