Psyllid ID: psy11819

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-
Protein Sequence
MCQDDVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQECCV
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHcHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHcccccHHHHHccccccccccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccccHHHHHHHcccHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccccccccccHHHHHHHcccHHHHHHHHHHcccccccEcccccEHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHHcccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHccHHHHHHcHHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHHcccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHcHHccccccccccccccHHHHHHHcccHHHHHHcHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccccHHHHHHHccccEEEEEEEc
Coil and Loop (DISEMBL)
mcqddvsskrdrsgdsnlihaVKGGHRGIVEALLKKYvdvdipgkvrklsdalnvtdandqrsttrnlldknkhkslKERKTAVYTAVEKGNVPILKLLLtanpdleiatktlprsdsmVSLCYRTLQSYIAEDNLDSLQTFLENkrtvaddrddnggTALMFAAQKGKLSFVRELVTrgadvnaedndnwspltyAAREGYTDVCAELLDhgadlehrdmggwsplmwasykghTDTVALLLDknadvnahgnyHISSLIWAAGRGYTEIVALLVKKGakvnvgdkvygttplvwaCRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALadifsepglatpltvglyakwgsgksfllpKLKEEMKHFerqgvdptftFSSLLFVLVMHLSygttplvwACRKGHVEIVDILLKaganvdvagLYCWTPLLVATLGNFTEVVELLLEYkpnvnaldkdgctALTIACKDGYYEIAVLLLNSgayiniqdrsgdsnlihaVKGGHRGIVEALLKKYvdvdipgkerkTAVYTAVEKGNVPILKLLLtanpdleiatkdgdtpllKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRnpknnillyrpnkagetpysidmnnqksilaqeccv
Flexible Loop (DISEMBL)
mcqddvsskrdrsgdsnlihavkgghRGIVEALLKKYVDVDIPgkvrklsdalnvtdandqrsttrnlldknkhkslkerktavytavekgnvpILKLLLTANPDLeiatktlprsdsmvSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRgadvnaedndnwspLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKkgakvnvgdkVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKyvdvdipgkerktavytavekgnvpILKLLLTANPDLeiatkdgdtpllKAVKTRNLEAIQMLidkkakitavdkrgdtVLHIamrarsktivevfirnpknnillyrpnkagetpysidmnnQKSILAQECCV
Low Complexity Region (SEG)
MCQDDVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQECCV
Disordered region (IsUnstruct)
*****************LIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSD******************************TAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTV*******GGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPN************************
Disordered Region (DISOPRED)
MCQDDVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQECCV
Disordered Region (DISEMBL)
**************DSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQECCV
Disordered Region (DISPRO)
*****VSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQECCV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCQDDVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQECCV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	651	2.2.26 [Sep-21-2011]
Q9EQG6	1762	Kinase D-interacting subs	yes	N/A	0.611	0.225	0.448	9e-97
Q9ULH0	1771	Kinase D-interacting subs	yes	N/A	0.600	0.220	0.437	2e-95
Q7T163	1672	Kinase D-interacting subs	yes	N/A	0.609	0.237	0.451	4e-93
Q9ULJ7	1429	Ankyrin repeat domain-con	no	N/A	0.680	0.310	0.320	1e-46
P16157	1881	Ankyrin-1 OS=Homo sapiens	no	N/A	0.771	0.266	0.295	3e-46
Q9VCA8	4001	Ankyrin repeat and KH dom	no	N/A	0.731	0.118	0.295	3e-45
Q8IWZ3	2542	Ankyrin repeat and KH dom	no	N/A	0.637	0.163	0.316	3e-44
Q99NH0	2603	Ankyrin repeat domain-con	no	N/A	0.625	0.156	0.326	5e-44
O75179	2603	Ankyrin repeat domain-con	no	N/A	0.625	0.156	0.326	6e-44
Q02357	1862	Ankyrin-1 OS=Mus musculus	no	N/A	0.829	0.290	0.266	2e-43

>sp|Q9EQG6|KDIS_RAT Kinase D-interacting substrate of 220 kDa OS=Rattus norvegicus GN=Kidins220 PE=1 SV=2

 Score =  355 bits (910), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 197/439 (44%), Positives = 271/439 (61%), Gaps = 41/439 (9%)

Query: 209 LLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGY 268
           LL+   D++ R+  G +PLM A+ +G+ + V  LL   A+ N     + ++LI A+  G+
Sbjct: 24  LLEKCKDVDERNECGQTPLMLAAEQGNVEIVKELLKNGANCNLEDLDNWTALISASKEGH 83

Query: 269 TEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLY 328
             IV  L+K GA +   D + G T L+WAC KG  ++V++LL  GAN  V GL++  P+ 
Sbjct: 84  IHIVEELLKSGASLEHRD-MGGWTALMWACYKGRTDVVELLLSHGANPSVTGLYSVYPII 142

Query: 329 SSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFV 388
                                   W +G+         ++ H   Q              
Sbjct: 143 ------------------------WAAGRG------HADIVHLLLQNGAKVNCSDK---- 168

Query: 389 LVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELL 448
                 YGTTPLVWA RKGH+E V  LL  GA+VD  G    T L+VA  G +T+ V+ +
Sbjct: 169 ------YGTTPLVWAARKGHLECVKHLLAMGADVDQEGANSMTALIVAVKGGYTQSVKEI 222

Query: 449 LEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHR 508
           L+  PNVN  DKDG TAL IA K+G+ EI   LL++G Y+NI DRSGD+ LI AV+GGH 
Sbjct: 223 LKRNPNVNLTDKDGNTALMIASKEGHIEIVQDLLDAGTYVNIPDRSGDTVLIGAVRGGHV 282

Query: 509 GIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKA 568
            IV ALL+KY D+DI G++ KTA+Y AVEKGN  +++ +L  NPD EI TKDG+TPL+KA
Sbjct: 283 EIVRALLQKYADIDIRGQDNKTALYWAVEKGNATMVRDILQCNPDTEICTKDGETPLIKA 342

Query: 569 VKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNK 628
            K RN+E +++L+DK AK++AVDK+GDT LH+A+R RS+ + E+ +RNPK+  LLYRPNK
Sbjct: 343 TKMRNIEVVELLLDKGAKVSAVDKKGDTPLHVAIRGRSRRLAELLLRNPKDGRLLYRPNK 402

Query: 629 AGETPYSIDMNNQKSILAQ 647
           AGETPY+ID ++QKSIL Q
Sbjct: 403 AGETPYNIDCSHQKSILTQ 421

Promotes a prolonged MAP-kinase signaling by neurotrophins through activation of a Rap1-dependent mechanism. Provides a docking site for the CRKL-C3G complex, resulting in Rap1-dependent sustained ERK activation. May play an important role in regulating postsynaptic signal transduction through the syntrophin-mediated localization of receptor tyrosine kinases such as EPHA4. In cooperation with SNTA1 can enhance EPHA4-induced JAK/STAT activation. May play a role in neurotrophin- and ephrin-mediated neuronal outgrowth and in axon guidance during neural development and in neuronal regeneration.
Rattus norvegicus (taxid: 10116)

>sp|Q9ULH0|KDIS_HUMAN Kinase D-interacting substrate of 220 kDa OS=Homo sapiens GN=KIDINS220 PE=1 SV=3

 Score =  350 bits (898), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 195/446 (43%), Positives = 274/446 (61%), Gaps = 55/446 (12%)

Query: 209 LLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGY 268
           LL+   D++ R+  G +PLM A+ +G+ + V  L+   A+ N     + ++LI A+  G+
Sbjct: 24  LLEKCKDVDERNECGQTPLMIAAEQGNLEIVKELIKNGANCNLEDLDNWTALISASKEGH 83

Query: 269 TEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLY 328
             IV  L+K G  +   D + G T L+WAC KG  ++V++LL  GAN  V GL++  P+ 
Sbjct: 84  VHIVEELLKCGVNLEHRD-MGGWTALMWACYKGRTDVVELLLSHGANPSVTGLYSVYPII 142

Query: 329 SSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFV 388
                                   W +G+                         + ++ +
Sbjct: 143 ------------------------WAAGRGH-----------------------ADIVHL 155

Query: 389 LVMHLS-------YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNF 441
           L+ + +       YGTTPLVWA RKGH+E V  LL  GA+VD  G    T L+VA  G +
Sbjct: 156 LLQNGAKVNCSDKYGTTPLVWAARKGHLECVKHLLAMGADVDQEGANSMTALIVAVKGGY 215

Query: 442 TEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIH 501
           T+ V+ +L+  PNVN  DKDG TAL IA K+G+ EI   LL++G Y+NI DRSGD+ LI 
Sbjct: 216 TQSVKEILKRNPNVNLTDKDGNTALMIASKEGHTEIVQDLLDAGTYVNIPDRSGDTVLIG 275

Query: 502 AVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDG 561
           AV+GGH  IV ALL+KY D+DI G++ KTA+Y AVEKGN  +++ +L  NPD EI TKDG
Sbjct: 276 AVRGGHVEIVRALLQKYADIDIRGQDNKTALYWAVEKGNATMVRDILQCNPDTEICTKDG 335

Query: 562 DTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNI 621
           +TPL+KA K RN+E +++L+DK AK++AVDK+GDT LHIA+R RS+ + E+ +RNPK+  
Sbjct: 336 ETPLIKATKMRNIEVVELLLDKGAKVSAVDKKGDTPLHIAIRGRSRKLAELLLRNPKDGR 395

Query: 622 LLYRPNKAGETPYSIDMNNQKSILAQ 647
           LLYRPNKAGETPY+ID ++QKSIL Q
Sbjct: 396 LLYRPNKAGETPYNIDCSHQKSILTQ 421

Promotes a prolonged MAP-kinase signaling by neurotrophins through activation of a Rap1-dependent mechanism. Provides a docking site for the CRKL-C3G complex, resulting in Rap1-dependent sustained ERK activation. May play an important role in regulating postsynaptic signal transduction through the syntrophin-mediated localization of receptor tyrosine kinases such as EPHA4. In cooperation with SNTA1 can enhance EPHA4-induced JAK/STAT activation. May play a role in neurotrophin- and ephrin-mediated neuronal outgrowth and in axon guidance during neural development and in neuronal regeneration (By similarity). Modulates stress-induced apoptosis of melanoma cells via regulation of the MEK/ERK signaling pathway.

Homo sapiens (taxid: 9606)

>sp|Q7T163|KDIS_DANRE Kinase D-interacting substrate of 220 kDa OS=Danio rerio GN=kidins220 PE=2 SV=2

 Score =  342 bits (878), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 198/439 (45%), Positives = 265/439 (60%), Gaps = 42/439 (9%)

Query: 210 LDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYT 269
           LD   +++ R   G +PLM AS +G  + V  L+ + A+VN       S+LI AA  G+ 
Sbjct: 25  LDKFKEVDGRSDNGQTPLMLASEQGSLEIVQELIRRGANVNLDDVDCWSALISAAKEGHV 84

Query: 270 EIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGL-WAYMPLY 328
           E+V  L++  A +   D + G T L WA  KG VE+  +LL+ GAN +  G  ++  P+ 
Sbjct: 85  EVVKELLENSAYIEHRD-MGGWTALTWASYKGRVEVATVLLENGANPNTTGQQYSVYPII 143

Query: 329 SSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFV 388
                                   W +G+        E +K     G     +       
Sbjct: 144 ------------------------WAAGRGH-----AEIVKLLLEHGAKVNCSDK----- 169

Query: 389 LVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELL 448
                 YGTTPL+WA RKGH + V  LL+ GA+VD  G    T L+VA  G +TEVV+ L
Sbjct: 170 ------YGTTPLIWAARKGHYDCVMHLLENGADVDQEGANSMTALIVAVKGGYTEVVKEL 223

Query: 449 LEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHR 508
           L+  PNVN  DKDG TAL IA K+GY EI   LL++G Y+NI DRSGD+ LI AV+GGH 
Sbjct: 224 LKRNPNVNMTDKDGNTALMIAAKEGYTEIVQDLLDAGTYVNIPDRSGDTVLIGAVRGGHV 283

Query: 509 GIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKA 568
            IV ALL KY D+DI G+E KTA+Y AVEKGN  +++ +L  NPD E  TKD +TPL+KA
Sbjct: 284 EIVRALLHKYADIDIRGQENKTALYWAVEKGNATMVRDILQCNPDTETTTKDSETPLIKA 343

Query: 569 VKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNK 628
            K R++E +++L+DK AK++AVDKRGDT LHIA+R RS+ + E+ +RNPK+  LLYRPNK
Sbjct: 344 TKMRSIEVVELLLDKGAKVSAVDKRGDTPLHIAIRGRSRRLAELLLRNPKDGRLLYRPNK 403

Query: 629 AGETPYSIDMNNQKSILAQ 647
           AGETPY+ID ++QKSIL Q
Sbjct: 404 AGETPYNIDCSHQKSILTQ 422

Downstream target for both neurotrophin and ephrin receptors.

Danio rerio (taxid: 7955)

>sp|Q9ULJ7|ANR50_HUMAN Ankyrin repeat domain-containing protein 50 OS=Homo sapiens GN=ANKRD50 PE=1 SV=4

 Score =  188 bits (477), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 156/486 (32%), Positives = 233/486 (47%), Gaps = 43/486 (8%)

Query: 137 DSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTY 196
           DS++T L+N  +V +  D NG T L  AA  G L  V  LV+RGAD+  ED    +PLT 
Sbjct: 526 DSIRTLLDNGASV-NQCDSNGRTLLANAAYSGSLDVVNLLVSRGADLEIEDAHGHTPLTL 584

Query: 197 AAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYH 256
           AAR+G+T V   L+  GA++ H D  GW+ L  A++ GHT+ V+ LL     V+      
Sbjct: 585 AARQGHTKVVNCLIGCGANINHTDQDGWTALRSAAWGGHTEVVSALLYAGVKVDCADADS 644

Query: 257 ISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANV 316
            ++L  AA  G+ +IV  L++ GA+VN  D   G T L+ A   GH EIV+ LL  GA V
Sbjct: 645 RTALRAAAWGGHEDIVLNLLQHGAEVNKADN-EGRTALIAAAYMGHREIVEHLLDHGAEV 703

Query: 317 ---DVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFER 373
              DV G  A             S   L  P + G      S  S L+ +   E+ H ++
Sbjct: 704 NHEDVDGRTA------------LSVAALCVPASKG----HASVVSLLIDR-GAEVDHCDK 746

Query: 374 QGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPL 433
            G+                     TPL+ A  +GHV++VD+LL+ GA+VD       TPL
Sbjct: 747 DGM---------------------TPLLVAAYEGHVDVVDLLLEGGADVDHTDNNGRTPL 785

Query: 434 LVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDR 493
           L A       VV  LL +   V+++D +G T L+IA   G  E+   LL+ G   N +D 
Sbjct: 786 LAAASMGHASVVNTLLFWGAAVDSIDSEGRTVLSIASAQGNVEVVRTLLDRGLDENHRDD 845

Query: 494 SGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPD 553
           +G + L  A   GHR I EAL+++    +    + +     A ++G+   +++LL    +
Sbjct: 846 AGWTPLHMAAFEGHRLICEALIEQGARTNEIDNDGRIPFILASQEGHYDCVQILLENKSN 905

Query: 554 LEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVF 613
           ++    DG   L  A    + + +++L    A +   D  G   L+I       T+ E F
Sbjct: 906 IDQRGYDGRNALRVAALEGHRDIVELLFSHGADVNCKDADGRPTLYILALENQLTMAEYF 965

Query: 614 IRNPKN 619
           + N  N
Sbjct: 966 LENGAN 971

Homo sapiens (taxid: 9606)

>sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3

 Score =  187 bits (475), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 166/561 (29%), Positives = 252/561 (44%), Gaps = 59/561 (10%)

Query: 78  KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLD 137
           K R  A++ A    +     +LL  +P+ ++ +KT           +  L      +NL+
Sbjct: 171 KVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKT----------GFTPLHIAAHYENLN 220

Query: 138 SLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYA 197
             Q  L N+    +    NG T L  A+++G +  VR L+ RGA +  +  D  +PL  A
Sbjct: 221 VAQLLL-NRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQIETKTKDELTPLHCA 279

Query: 198 AREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHI 257
           AR G+  +   LLDHGA ++ +   G SP+  A+   H D V LLL  +A+++     H+
Sbjct: 280 ARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYDAEIDDITLDHL 339

Query: 258 SSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
           + L  AA  G+  +  +L+ KGAK N    + G TPL  AC+K HV ++++LLK GA++D
Sbjct: 340 TPLHVAAHCGHHRVAKVLLDKGAKPN-SRALNGFTPLHIACKKNHVRVMELLLKTGASID 398

Query: 318 VAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFL--LPKLKEEMKHFERQG 375
                              +E GL TPL V          SF+  LP +K  ++    +G
Sbjct: 399 A-----------------VTESGL-TPLHVA---------SFMGHLPIVKNLLQ----RG 427

Query: 376 VDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLV 435
             P  +   +            TPL  A R GH E+   LL+  A V+       TPL  
Sbjct: 428 ASPNVSNVKV-----------ETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHC 476

Query: 436 ATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSG 495
           A     T +V+LLLE   N N     G T L IA ++G+ E  + LL   A      + G
Sbjct: 477 AARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKG 536

Query: 496 DSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLE 555
            + L  A K G   + E LL++    +  GK   T ++ AV   N+ I+KLLL       
Sbjct: 537 FTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPH 596

Query: 556 IATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIR 615
               +G TPL  A K   +E  + L+       A   +G T LH+A +     +V + + 
Sbjct: 597 SPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLS 656

Query: 616 NPKNNILLYRPNKAGETPYSI 636
              N  L    NK+G TP  +
Sbjct: 657 KQANGNL---GNKSGLTPLHL 674

Isoform Mu17 together with obscurin in skeletal muscle may provide a molecular link between the sarcoplasmic reticulum and myofibrils.

Homo sapiens (taxid: 9606)

>sp|Q9VCA8|ANKHM_DROME Ankyrin repeat and KH domain-containing protein mask OS=Drosophila melanogaster GN=mask PE=1 SV=2

 Score =  183 bits (465), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 155/525 (29%), Positives = 245/525 (46%), Gaps = 49/525 (9%)

Query: 136  LDSLQTFLENKRTVADDRDDNGG--TALMFAAQKGKLSFVRELVTRGA----DVNAEDND 189
            +D  +  L   R  +  RD N G   +L+ A     ++ V+ L+ +G     D  A  +D
Sbjct: 525  IDETKQALTKMRCASSPRDKNSGFSRSLVAACTDNDVNTVKRLLCKGNVNLNDAAASTDD 584

Query: 190  NWSPLTYAAREGYTDVCAELLD-HGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNAD 248
              S L+ A   GY ++   LL    A +E +     +PLM A+  GH D V LLL+ NAD
Sbjct: 585  GESLLSMACSAGYYELAQVLLAMSAAQVEDKGQKDSTPLMEAASAGHLDIVKLLLNHNAD 644

Query: 249  VNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDI 308
            VNAH     + L++A   G  ++V +L+K GA V   ++  G TPL+ A   GHVE+  +
Sbjct: 645  VNAHCATGNTPLMFACAGGQVDVVKVLLKHGANVEEQNE-NGHTPLMEAASAGHVEVAKV 703

Query: 309  LLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLP------ 362
            LL+ GA ++               ++ F E    + LT+  Y        FLL       
Sbjct: 704  LLEHGAGINTH-------------SNEFKE----SALTLACYKGHLDMVRFLLQAGADQE 746

Query: 363  -KLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGT----TPLVWACRKGHVEIVDILLK 417
             K  E         +D     + LL      ++  T    +PL  A   GHVE+  +L++
Sbjct: 747  HKTDEMHTALMEASMDGHVEVARLLLDSGAQVNMPTDSFESPLTLAACGGHVELATLLIE 806

Query: 418  AGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGC-TALTIACKDGYYE 476
             GAN++      +TPL+ A      E+V LLL    N+NA  ++   TALT+AC  G+ E
Sbjct: 807  RGANIEEVNDEGYTPLMEAAREGHEEMVALLLSKGANINATTEETQETALTLACCGGFME 866

Query: 477  IAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAV 536
            +A  L+  GA + +      + L+ A + GH  +V  LLKK  +V    +   TA+  A 
Sbjct: 867  VAAFLIKEGANLEL---GASTPLMEASQEGHTDLVSFLLKKKANVHAETQTGDTALTHAC 923

Query: 537  EKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGD- 595
            E G+     +LL+   +LE  ++ G TPL+KA +  +L  ++ LI K A +       D 
Sbjct: 924  ENGHTDAAGVLLSYGAELEHESEGGRTPLMKACRAGHLCTVKFLIQKGANVNKQTTSNDH 983

Query: 596  TVLHIAMRARSKTIVEVFIRN--------PKNNILLYRPNKAGET 632
            T L +A     +++VE+ ++N          N+ +L   +K G T
Sbjct: 984  TALSLACAGGHQSVVELLLKNNADPFHKLKDNSTMLIEASKGGHT 1028

Mediator of receptor tyrosine kinase (RTK) signaling, and may act either downstream of MAPK or transduce signaling through a parallel branch of the RTK pathway.

Drosophila melanogaster (taxid: 7227)

>sp|Q8IWZ3|ANKH1_HUMAN Ankyrin repeat and KH domain-containing protein 1 OS=Homo sapiens GN=ANKHD1 PE=1 SV=1

 Score =  180 bits (456), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 145/458 (31%), Positives = 232/458 (50%), Gaps = 43/458 (9%)

Query: 151 DDRDDNGG-TALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAEL 209
           +DR + G  T LM A+  G L  V+ L+   ADVN++     + LTYA   G+ D+   L
Sbjct: 265 EDRGNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQSATGNTALTYACAGGFVDIVKVL 324

Query: 210 LDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGN-YHISSLIWAAGRGY 268
           L+ GA++E  +  G +PLM A+  GH +   +LLD  A +N H N +  S+L  A  +G+
Sbjct: 325 LNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHGAGINTHSNEFKESALTLACYKGH 384

Query: 269 TEIVALLVKKGA-KVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPL 327
            ++V  L++ GA + +  D+++  T L+ AC  GHVE+  +LL +GA V+       MP 
Sbjct: 385 LDMVRFLLEAGADQEHKTDEMH--TALMEACMDGHVEVARLLLDSGAQVN-------MP- 434

Query: 328 YSSALADIFSEPGLATPLTVGLYAKWGSGK-SFLLPKLKEEMKHFERQGVDPTFTFS--- 383
                AD F      +PLT  L A  G  + + LL +    ++    +G  P    +   
Sbjct: 435 -----ADSFE-----SPLT--LAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREG 482

Query: 384 -----SLLFVLVMHLSYGT-----TPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPL 433
                +LL     +++  T     T L  AC  G  E+ D L+KAGA+++   L C TPL
Sbjct: 483 HEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIE---LGCSTPL 539

Query: 434 LVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDR 493
           + A+     E+V+ LL    NV+A    G TALT AC++G+ ++A +LL +GA +  +  
Sbjct: 540 MEASQEGHLELVKYLLASGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESE 599

Query: 494 SGDSNLIHAVKGGHRGIVEALLKKYVDVD-IPGKERKTAVYTAVEKGNVPILKLLLTANP 552
            G + L+ A + GH   V+ L+ K  +V+        T V  A   G++ +++LLL    
Sbjct: 600 GGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGA 659

Query: 553 DLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAV 590
           D     KDG T L++A K  +   +  L+D    + +V
Sbjct: 660 DPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSV 697

May play a role as a scaffolding protein that may be associated with the abnormal phenotype of leukemia cells. Isoform 2 may possess an antiapoptotic effect and protect cells during normal cell survival through its regulation of caspases.

Homo sapiens (taxid: 9606)

>sp|Q99NH0|ANR17_MOUSE Ankyrin repeat domain-containing protein 17 OS=Mus musculus GN=Ankrd17 PE=1 SV=2

 Score =  179 bits (454), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 147/450 (32%), Positives = 227/450 (50%), Gaps = 43/450 (9%)

Query: 151 DDRDDNGG-TALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAEL 209
           +DR   G  T LM AA  G +  V+ L+   ADVNA+ +   + LTYA   GY DV   L
Sbjct: 290 EDRGIKGDITPLMAAANGGHVKIVKLLLAHKADVNAQSSTGNTALTYACAGGYVDVVKVL 349

Query: 210 LDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGN-YHISSLIWAAGRGY 268
           L+ GA +E  +  G +PLM A   GH +   LLL+  A +N H N +  S+L  A  +G+
Sbjct: 350 LESGASIEDHNENGHTPLMEAGSAGHVEVARLLLENGAGINTHSNEFKESALTLACYKGH 409

Query: 269 TEIVALLVKKGA-KVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPL 327
            E+V  L++ GA + +  D+++  T L+ AC  GHVE+  +LL +GA V+       MP 
Sbjct: 410 LEMVRFLLEAGADQEHKTDEMH--TALMEACMDGHVEVARLLLDSGAQVN-------MP- 459

Query: 328 YSSALADIFSEPGLATPLTVGLYAKWGSGK-SFLLPKLKEEMKHFERQGVDPTFTFS--- 383
                AD F      +PLT  L A  G  + + LL +    ++    +G  P    +   
Sbjct: 460 -----ADSFE-----SPLT--LAACGGHVELAALLIERGASLEEVNDEGYTPLMEAAREG 507

Query: 384 -----SLLFVLVMHLSYGT-----TPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPL 433
                +LL     +++  T     T L  AC  G +E+ D L+KAGA+++   L C TPL
Sbjct: 508 HEEMVALLLGQGANINAQTEETQETALTLACCGGFLEVADFLIKAGADIE---LGCSTPL 564

Query: 434 LVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDR 493
           + A      E+V+ LL    NV+A    G TALT AC++G+ ++A +LL +GA +  +  
Sbjct: 565 MEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESE 624

Query: 494 SGDSNLIHAVKGGHRGIVEALLKKYVDVD-IPGKERKTAVYTAVEKGNVPILKLLLTANP 552
            G + L+ A + GH   V+ L+ K  +V+        T +  A   G++ +++LLL    
Sbjct: 625 GGRTPLMKAARAGHVCTVQFLISKGANVNRTTANNDHTVLSLACAGGHLAVVELLLAHGA 684

Query: 553 DLEIATKDGDTPLLKAVKTRNLEAIQMLID 582
           D     KDG T L++A K  +   +  L+D
Sbjct: 685 DPTHRLKDGSTMLIEAAKGGHTSVVCYLLD 714

Earliest specific in situ marker of hepatic differentiation during embryogenesis, useful for characterization of inductive events involved in hepatic specification.

Mus musculus (taxid: 10090)

>sp|O75179|ANR17_HUMAN Ankyrin repeat domain-containing protein 17 OS=Homo sapiens GN=ANKRD17 PE=1 SV=3

 Score =  179 bits (454), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 147/450 (32%), Positives = 227/450 (50%), Gaps = 43/450 (9%)

Query: 151 DDRDDNGG-TALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAEL 209
           +DR   G  T LM AA  G +  V+ L+   ADVNA+ +   + LTYA   GY DV   L
Sbjct: 294 EDRGIKGDITPLMAAANGGHVKIVKLLLAHKADVNAQSSTGNTALTYACAGGYVDVVKVL 353

Query: 210 LDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGN-YHISSLIWAAGRGY 268
           L+ GA +E  +  G +PLM A   GH +   LLL+  A +N H N +  S+L  A  +G+
Sbjct: 354 LESGASIEDHNENGHTPLMEAGSAGHVEVARLLLENGAGINTHSNEFKESALTLACYKGH 413

Query: 269 TEIVALLVKKGA-KVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPL 327
            E+V  L++ GA + +  D+++  T L+ AC  GHVE+  +LL +GA V+       MP 
Sbjct: 414 LEMVRFLLEAGADQEHKTDEMH--TALMEACMDGHVEVARLLLDSGAQVN-------MP- 463

Query: 328 YSSALADIFSEPGLATPLTVGLYAKWGSGK-SFLLPKLKEEMKHFERQGVDPTFTFS--- 383
                AD F      +PLT  L A  G  + + LL +    ++    +G  P    +   
Sbjct: 464 -----ADSFE-----SPLT--LAACGGHVELAALLIERGASLEEVNDEGYTPLMEAAREG 511

Query: 384 -----SLLFVLVMHLSYGT-----TPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPL 433
                +LL     +++  T     T L  AC  G +E+ D L+KAGA+++   L C TPL
Sbjct: 512 HEEMVALLLGQGANINAQTEETQETALTLACCGGFLEVADFLIKAGADIE---LGCSTPL 568

Query: 434 LVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDR 493
           + A      E+V+ LL    NV+A    G TALT AC++G+ ++A +LL +GA +  +  
Sbjct: 569 MEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESE 628

Query: 494 SGDSNLIHAVKGGHRGIVEALLKKYVDVD-IPGKERKTAVYTAVEKGNVPILKLLLTANP 552
            G + L+ A + GH   V+ L+ K  +V+        T +  A   G++ +++LLL    
Sbjct: 629 GGRTPLMKAARAGHVCTVQFLISKGANVNRTTANNDHTVLSLACAGGHLAVVELLLAHGA 688

Query: 553 DLEIATKDGDTPLLKAVKTRNLEAIQMLID 582
           D     KDG T L++A K  +   +  L+D
Sbjct: 689 DPTHRLKDGSTMLIEAAKGGHTSVVCYLLD 718

Earliest specific in situ marker of hepatic differentiation during embryogenesis, useful for characterization of inductive events involved in hepatic specification (By similarity). Target of enterovirus 71 which is the major etiological agent of HFMD (hand, foot and mouth disease).

Homo sapiens (taxid: 9606)

>sp|Q02357|ANK1_MOUSE Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2

 Score =  177 bits (450), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 166/622 (26%), Positives = 277/622 (44%), Gaps = 82/622 (13%)

Query: 78  KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLD 137
           K R  A++ A    +     +LL  +P+ ++ +KT           +  L      +NL+
Sbjct: 167 KVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKT----------GFTPLHIAAHYENLN 216

Query: 138 SLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYA 197
             Q  L N+    +    NG T L  A+++G +  VR L+ RGA +     D  +PL  A
Sbjct: 217 VAQLLL-NRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCA 275

Query: 198 AREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHI 257
           AR G+  +   LLDHGA ++ +   G SP+  A+   H D V LLL  NA+++     H+
Sbjct: 276 ARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEIDDITLDHL 335

Query: 258 SSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
           + L  AA  G+  +  +L+ KGAK N    + G TPL  AC+K H+ ++++LLK GA++D
Sbjct: 336 TPLHVAAHCGHHRVAKVLLDKGAKPN-SRALNGFTPLHIACKKNHIRVMELLLKTGASID 394

Query: 318 -----------VAGLWAYMPLYSSAL----ADIFSEPGLATPLTVGLYAKWGSGKSFLLP 362
                      VA    ++P+  + L    +   S   + TPL +   A       +LL 
Sbjct: 395 AVTESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLL- 453

Query: 363 KLKEEMKHFERQGVDPTFTFSSLLFVLVMHL------------SYGTTPLVWACRKGHVE 410
           + K +     +    P    + +    ++ L            + G TPL  A R+GHV+
Sbjct: 454 QNKAKANAKAKDDQTPLHCAARIGHTGMVKLLLENGASPNLATTAGHTPLHTAAREGHVD 513

Query: 411 ---------------------------------IVDILLKAGANVDVAGLYCWTPLLVAT 437
                                            + ++LL+  A+ + AG    TPL VA 
Sbjct: 514 TALALLEKEASQACMTKKGFTPLHVAAKYGKVRLAELLLEHDAHPNAAGKNGLTPLHVAV 573

Query: 438 LGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDS 497
             N  ++V+LLL    + ++   +G T L IA K    E+A  LL  G   N +   G +
Sbjct: 574 HHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQIEVARSLLQYGGSANAESVQGVT 633

Query: 498 NLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIA 557
            L  A + GH  +V  LL K  + ++  K   T ++   ++G+VP+  +L+     ++  
Sbjct: 634 PLHLAAQEGHTEMVALLLSKQANGNLGNKSGLTPLHLVSQEGHVPVADVLIKHGVTVDAT 693

Query: 558 TKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNP 617
           T+ G TPL  A    N++ ++ L+  +A + A  K G + LH A +     IV + ++N 
Sbjct: 694 TRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG 753

Query: 618 KNNILLYRPNKA---GETPYSI 636
            +      PN+    G TP +I
Sbjct: 754 AS------PNEVSSNGTTPLAI 769

Attaches integral membrane proteins to cytoskeletal elements; binds to the erythrocyte membrane protein band 4.2, to Na-K ATPase, to the lymphocyte membrane protein GP85, and to the cytoskeletal proteins fodrin, tubulin, vimentin and desmin. Erythrocyte ankyrins also link spectrin (beta chain) to the cytoplasmic domain of the erythrocytes anion exchange protein; they retain most or all of these binding functions. In skeletal muscle, isoform Mu7 together with obscurin may provide a molecular link between the sarcoplasmic reticulum and myofibrils.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	651
383854925	2060	PREDICTED: kinase D-interacting substrat	0.599	0.189	0.549	1e-122
242012957	2002	ankyrin repeat-containing protein, putat	0.622	0.202	0.497	1e-120
380028271	1636	PREDICTED: LOW QUALITY PROTEIN: kinase D	0.599	0.238	0.545	1e-120
345490607	1687	PREDICTED: kinase D-interacting substrat	0.600	0.231	0.537	1e-120
307170994	2050	Ankyrin repeat-rich membrane spanning pr	0.589	0.187	0.535	1e-120
307214371	1867	Ankyrin repeat-rich membrane spanning pr	0.660	0.230	0.505	1e-119
328713862	1654	PREDICTED: kinase D-interacting substrat	0.600	0.236	0.530	1e-119
270013710	1738	hypothetical protein TcasGA2_TC012347 [T	0.599	0.224	0.531	1e-117
189240819	1460	PREDICTED: similar to CG30387 CG30387-PB	0.600	0.267	0.529	1e-116
340725021	2271	PREDICTED: kinase D-interacting substrat	0.599	0.171	0.547	1e-116

>gi|383854925|ref|XP_003702970.1| PREDICTED: kinase D-interacting substrate of 220 kDa-like [Megachile rotundata]

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/433 (54%), Positives = 301/433 (69%), Gaps = 43/433 (9%)

Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
           ++ RD  G + L+ A+ KG    V  L++  ADVNA    + ++L+ AA  G+T++   L
Sbjct: 433 IDDRDENGSTALILAATKGKIHFVRELINHGADVNAEDGDNWTALLCAAKEGHTDVCLEL 492

Query: 276 VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADI 335
           ++ GA +   D + G T L+WA  KG    V +LL  GA+V+  G +    L        
Sbjct: 493 LEHGADLEHRD-MGGWTALMWATYKGRSPTVTMLLARGADVNAHGNFHISSLL------- 544

Query: 336 FSEPGLATPLTVGLYAKWGSGKSFLLPKL-KEEMKHFERQGVDPTFTFSSLLFVLVMHLS 394
                            W +G+ +  P + K+ + H  +  V                  
Sbjct: 545 -----------------WAAGRGY--PDIVKDLIAHGAKVNVGD---------------K 570

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           YGTT LVWA RKGHVEIVD LLKAGANVD AG+Y WT LLVATLGN  +VV LLLE+KPN
Sbjct: 571 YGTTALVWASRKGHVEIVDALLKAGANVDTAGMYSWTALLVATLGNHADVVLLLLEHKPN 630

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           VNALDKDGCTAL IAC++G++EIA  LLN+GAY+NIQDR+GD+NLIHAVKGGHRG+VE+L
Sbjct: 631 VNALDKDGCTALAIACREGHHEIANALLNAGAYVNIQDRAGDTNLIHAVKGGHRGVVESL 690

Query: 515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
           LKKY DVDI GK++KTA Y AVEKGN+PILKLLL ANPDLEIATKDGDTPLL+AV++RN 
Sbjct: 691 LKKYADVDIAGKDKKTATYIAVEKGNIPILKLLLNANPDLEIATKDGDTPLLRAVRSRNA 750

Query: 575 EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPY 634
           E +Q+L+DKKAK++A DK+GDTVLHIAMRARSK IVE+ +RNPKN+ LLYRPN+ GETPY
Sbjct: 751 EIVQLLLDKKAKVSATDKKGDTVLHIAMRARSKAIVEILLRNPKNSQLLYRPNRQGETPY 810

Query: 635 SIDMNNQKSILAQ 647
           +ID+N+ K+IL Q
Sbjct: 811 NIDINHPKTILGQ 823

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242012957|ref|XP_002427190.1| ankyrin repeat-containing protein, putative [Pediculus humanus corporis] gi|212511477|gb|EEB14452.1| ankyrin repeat-containing protein, putative [Pediculus humanus corporis]

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/460 (49%), Positives = 314/460 (68%), Gaps = 55/460 (11%)

Query: 195 TYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGN 254
           TY   +  T++ + L +  + ++ RD    + L++A+ KG  D V  L+D  ADVNA  +
Sbjct: 222 TYIEDDNVTELRSFLNEKKSQVDDRDENRSTALIYAATKGKLDFVKDLIDYGADVNAEDD 281

Query: 255 YHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGA 314
            + ++L+ AA  G+ +I   L+  GA V+  D +   T L+WA  KGH ++V++L++ GA
Sbjct: 282 DNWTALLCAAKEGWYDICKELLDHGADVDHRD-MGSWTALLWASYKGHTQVVELLVERGA 340

Query: 315 NVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQ 374
           +V+    +    ++                        W SG+                 
Sbjct: 341 DVNAHDNYHISSIH------------------------WASGRGH--------------- 361

Query: 375 GVDPTFTFSSLLFVLVMHLS-------YGTTPLVWACRKGHVEIVDILLKAGANVDVAGL 427
                   ++++ +L+ + +       YGTT L+WACRKG+VEIVD+LLKAGAN D +G+
Sbjct: 362 --------ANIVKILLQNSAKVNKGDKYGTTALIWACRKGYVEIVDMLLKAGANADASGM 413

Query: 428 YCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAY 487
           Y WTPL+VA  GN+ EVV LLLE+KPNVNALDKDG TAL +ACK+G+Y+I V LL +GAY
Sbjct: 414 YSWTPLIVAAAGNYAEVVGLLLEHKPNVNALDKDGYTALALACKEGHYDIVVALLAAGAY 473

Query: 488 INIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLL 547
           IN+QDRSGD+NLI AVKGGHRG+VEALLKKYVDVD PGK++KTA+YTAVEKGN P++KL+
Sbjct: 474 INVQDRSGDTNLILAVKGGHRGVVEALLKKYVDVDTPGKDKKTALYTAVEKGNAPLVKLI 533

Query: 548 LTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSK 607
           L+ANPDLE+ TKDGDT LL+AV++RN E +Q+L+DKKAK++  DK+GDTVLHIAMRARSK
Sbjct: 534 LSANPDLEVTTKDGDTALLRAVRSRNAEIVQLLLDKKAKVSVTDKKGDTVLHIAMRARSK 593

Query: 608 TIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQ 647
            IVE+ +RNP+N+ LLYRPN+ GETPY+ID+N QK+IL Q
Sbjct: 594 KIVEILLRNPRNSQLLYRPNRNGETPYNIDINQQKTILGQ 633

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380028271|ref|XP_003697830.1| PREDICTED: LOW QUALITY PROTEIN: kinase D-interacting substrate of 220 kDa-like [Apis florea]

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 236/433 (54%), Positives = 300/433 (69%), Gaps = 43/433 (9%)

Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
           ++ RD  G + L+ A+ KG    V  L++  ADVNA    + ++L+ AA  G+T++   L
Sbjct: 32  IDDRDENGSTALILAATKGKIHFVRELINHGADVNAEDGDNWTALLCAAKEGHTDVCLEL 91

Query: 276 VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADI 335
           ++ GA +   D + G T L+WA  KG    V +LL  GA+V+  G +    L        
Sbjct: 92  LEHGADLEHRD-MGGWTALMWATYKGKSPTVTMLLTRGADVNAHGNFHISSLL------- 143

Query: 336 FSEPGLATPLTVGLYAKWGSGKSFLLPKL-KEEMKHFERQGVDPTFTFSSLLFVLVMHLS 394
                            W +G+ +  P + K+ + H  +  V                  
Sbjct: 144 -----------------WAAGRGY--PDIVKDLIAHGAKVNVGD---------------K 169

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           YGTT LVWA RKGHVEIVD LLK+GANVD AG+Y WT LLVATLGN  +VV LLLE+KPN
Sbjct: 170 YGTTALVWASRKGHVEIVDTLLKSGANVDTAGMYSWTALLVATLGNHVDVVLLLLEHKPN 229

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           VNALDKDGCTAL IAC++G++EIA  LLN+GAY+NIQDR+GD+NLIHAVKGGHRG+VE+L
Sbjct: 230 VNALDKDGCTALAIACREGHHEIANALLNAGAYVNIQDRAGDTNLIHAVKGGHRGVVESL 289

Query: 515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
           LKKY DVDI GK++KTA Y AVEKGN+ ILKLLL ANPDLEIATKDGDTPLL+AV++RN 
Sbjct: 290 LKKYADVDIAGKDKKTATYIAVEKGNIQILKLLLNANPDLEIATKDGDTPLLRAVRSRNA 349

Query: 575 EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPY 634
           E +Q+L+DKKAK++A DK+GDTVLHIAMRARSK IVE+ +RNPKN+ LLYRPN+ GETPY
Sbjct: 350 EIVQLLLDKKAKVSATDKKGDTVLHIAMRARSKAIVEILLRNPKNSQLLYRPNRQGETPY 409

Query: 635 SIDMNNQKSILAQ 647
           +ID+N+ K+IL Q
Sbjct: 410 NIDINHPKTILGQ 422

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345490607|ref|XP_003426415.1| PREDICTED: kinase D-interacting substrate of 220 kDa-like [Nasonia vitripennis]

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/432 (53%), Positives = 299/432 (69%), Gaps = 41/432 (9%)

Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
           ++ RD  G + L+ ++ +G    V  L++   DVNA    + ++L++AA  G+ ++   L
Sbjct: 32  VDDRDENGSTALILSASRGKIHFVRELINHGGDVNAEDADNWTALLFAAKEGFNDVCIEL 91

Query: 276 VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADI 335
           ++ GA +   D   G T L+WA  KG    V +LL  GA+V+  G +    L        
Sbjct: 92  LEHGAALEHRD-AGGWTALMWATYKGRTSTVTLLLARGADVNAHGNYHISSLL------- 143

Query: 336 FSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSY 395
                            W +G+ +    +KE + +  +  V                  Y
Sbjct: 144 -----------------WAAGRGYT-EIVKELLAYGAKVNVGD---------------KY 170

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           GTT ++WA RKG +EIVD LLKAG+ VD AG+Y WTPLLVATLGN  EVV LLL++KPNV
Sbjct: 171 GTTAIIWASRKGSLEIVDALLKAGSTVDTAGMYSWTPLLVATLGNHVEVVLLLLDHKPNV 230

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           NA+DKDGCTAL+IAC++GY+EIA  LLN+GAYINIQD+SGD+NLIHAVKGGHRG+VEALL
Sbjct: 231 NAVDKDGCTALSIACREGYFEIANALLNAGAYINIQDKSGDTNLIHAVKGGHRGVVEALL 290

Query: 516 KKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLE 575
           KKY DVDIPGK+RKTA Y AVEKGNV ILK+LLTANPDLEIATKDGDTPLL+AV++RN E
Sbjct: 291 KKYADVDIPGKDRKTATYIAVEKGNVSILKVLLTANPDLEIATKDGDTPLLRAVRSRNAE 350

Query: 576 AIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYS 635
            +Q+L+DKKAK++A DK+GDTVLH+AMRARSK IVE+ +RNPKN+ LLYRPNK GETPY+
Sbjct: 351 IVQLLLDKKAKVSAADKKGDTVLHVAMRARSKGIVEILLRNPKNSQLLYRPNKQGETPYN 410

Query: 636 IDMNNQKSILAQ 647
           ID+N+ K+IL Q
Sbjct: 411 IDINHPKTILGQ 422

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307170994|gb|EFN63057.1| Ankyrin repeat-rich membrane spanning protein [Camponotus floridanus]

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/439 (53%), Positives = 298/439 (67%), Gaps = 55/439 (12%)

Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
           ++ RD    + L++A+ KG    V  L++  ADVNA      S+L+ AA  G+TE+   L
Sbjct: 429 IDDRDENSSTALIFAATKGKLHFVRELINHGADVNAEDADDWSALLCAAKEGHTEVCLEL 488

Query: 276 VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADI 335
           ++ GA +   D + G T L+WA  K     V +LL  GA+V+  G +             
Sbjct: 489 LEHGADLEHRD-MGGWTALMWATYKNKSATVTMLLARGADVNAHGNYHI----------- 536

Query: 336 FSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLS- 394
              P L           W +G+ +                       S ++  L+ H + 
Sbjct: 537 ---PALL----------WAAGRGY-----------------------SDIIRDLIAHGAK 560

Query: 395 ------YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELL 448
                 YGTT L+WA RKG+VEIVD+LLKAGANVD AG+Y WT LLVATLGN  EVV LL
Sbjct: 561 VNVGDKYGTTALIWASRKGNVEIVDMLLKAGANVDTAGMYSWTALLVATLGNHVEVVLLL 620

Query: 449 LEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHR 508
           LE+KPNVNALDKDGCTAL IAC++G++EI   LLN+GAY+NIQDR+GD+NLIHAVKGGHR
Sbjct: 621 LEHKPNVNALDKDGCTALAIACREGHHEITSALLNAGAYVNIQDRAGDTNLIHAVKGGHR 680

Query: 509 GIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKA 568
            +VE+LLKKY DVDI GK++KTA Y AVEKGNVPILKLLL ANPDLEIATKDGDTPLL+A
Sbjct: 681 SVVESLLKKYADVDIAGKDKKTATYIAVEKGNVPILKLLLNANPDLEIATKDGDTPLLRA 740

Query: 569 VKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNK 628
           V++RN E +Q+L+DKKAK++A DK+GDTVLH+AMRARSK IVE+ +RNPKN+ LLYRPN+
Sbjct: 741 VRSRNAEIVQLLLDKKAKVSAADKKGDTVLHVAMRARSKAIVEILLRNPKNSQLLYRPNR 800

Query: 629 AGETPYSIDMNNQKSILAQ 647
            GETPY+ID+N+ K+IL Q
Sbjct: 801 QGETPYNIDVNHPKTILGQ 819

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307214371|gb|EFN89445.1| Ankyrin repeat-rich membrane spanning protein [Harpegnathos saltator]

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 241/477 (50%), Positives = 312/477 (65%), Gaps = 47/477 (9%)

Query: 177 VTRGADVNAEDNDNWSPLTYAAREGYT--DVCAELLDH----GADLEHRDMGGWSPLMWA 230
           + R +       D+   L+Y +   Y   D  AEL +      A ++ RD  G + L+ A
Sbjct: 444 IRRHSQATLHRTDSMVSLSYRSLASYITDDNLAELQNFLENKRAQVDDRDENGSTALILA 503

Query: 231 SYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYG 290
           + KG    V +L++  ADVNA    + ++L+ AA  G+TEI   L++ GA +   D + G
Sbjct: 504 ATKGKIQFVRVLINHGADVNAEDGDNWTALLCAAREGHTEICLELLEHGADLEHRD-MGG 562

Query: 291 TTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLY 350
            T L+WA  +G    V +LL  GA+V   G +    L                       
Sbjct: 563 WTALMWATYRGRSATVTMLLARGADVSAHGNFHISSLL---------------------- 600

Query: 351 AKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVE 410
             W +G+ +    +K+ + H  +  V                  YGTT LVWA RKG+V+
Sbjct: 601 --WAAGRGYT-DIVKDLIAHGAKVNVGD---------------KYGTTALVWASRKGNVD 642

Query: 411 IVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIAC 470
           IVDILLKAGANVD AG+Y WT LLVA+LGN  +VV LLLE++PNVNALDKDGCTAL IAC
Sbjct: 643 IVDILLKAGANVDTAGMYSWTALLVASLGNHVDVVLLLLEHRPNVNALDKDGCTALAIAC 702

Query: 471 KDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKT 530
           ++GY+EIA  LLN+GAY+NIQDR+G +NLIHAVKGGHRG+VE+LLKKY DVD+ GK++KT
Sbjct: 703 REGYHEIANALLNAGAYVNIQDRTGATNLIHAVKGGHRGVVESLLKKYADVDVAGKDKKT 762

Query: 531 AVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAV 590
           A Y AVEKGN+ ILKLLL ANPDLEIATKDGDTPLL+AV+ RN + +Q+L+DKKAK++A 
Sbjct: 763 ATYIAVEKGNIQILKLLLNANPDLEIATKDGDTPLLRAVRVRNADIVQLLLDKKAKVSAT 822

Query: 591 DKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQ 647
           DK+GDT LHIAMRA+SK IVE+ +RNPKN+ LLYRPN+ GETPYSID N+ K+IL Q
Sbjct: 823 DKKGDTALHIAMRAQSKAIVEILLRNPKNSQLLYRPNRQGETPYSIDFNHPKTILGQ 879

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328713862|ref|XP_001943427.2| PREDICTED: kinase D-interacting substrate of 220 kDa-like [Acyrthosiphon pisum]

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 229/432 (53%), Positives = 300/432 (69%), Gaps = 41/432 (9%)

Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
           ++ RD  G + L +A+ KG    +  L++  +DVN   N + ++LI AA  G+T+I A L
Sbjct: 32  VDDRDDNGATALHYAAVKGKLQFLRELINHGSDVNIEDNDNWTALICAAKEGHTDICAEL 91

Query: 276 VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADI 335
           +  GA +   D + G T L+W+   G+  + ++LL  GA+++     A+   + +AL  +
Sbjct: 92  LDHGADIEHRD-MGGWTSLIWSSYCGYTNLANLLLDRGADIN-----AHGNFHITAL--V 143

Query: 336 FSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSY 395
           ++     T L   L A+                                    + +   Y
Sbjct: 144 WAAGRGHTKLACSLIARGAK---------------------------------VNVGDKY 170

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           GT+ LVWACRKG VE+VD LL+AGANVD AG+Y WTPLLV+++GN TEVV LLLE KPNV
Sbjct: 171 GTSALVWACRKGDVELVDSLLRAGANVDTAGMYSWTPLLVSSMGNHTEVVNLLLERKPNV 230

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           NALD+DGCTALTIACK+GYY+IA  LLN+GAYINIQDRS D+NLIHAVKGGHR IVEALL
Sbjct: 231 NALDQDGCTALTIACKEGYYDIANSLLNAGAYINIQDRSSDTNLIHAVKGGHRNIVEALL 290

Query: 516 KKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLE 575
           KKY DVD+ GKERKTA+Y A+EKGN  I+KLLL ANPDLEI+TKDGDTPL++AV+ RN E
Sbjct: 291 KKYADVDVMGKERKTALYIAIEKGNTAIIKLLLGANPDLEISTKDGDTPLMRAVRNRNAE 350

Query: 576 AIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYS 635
           A+Q+LI+K+A++ A DKRGDT LHIAMRAR++ IVE+ +RNPKN+ LLYRPN+AGETPY+
Sbjct: 351 AVQLLIEKRARVPATDKRGDTALHIAMRARARGIVEILLRNPKNSQLLYRPNRAGETPYN 410

Query: 636 IDMNNQKSILAQ 647
           +D+N QK IL+Q
Sbjct: 411 MDVNAQKPILSQ 422

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270013710|gb|EFA10158.1| hypothetical protein TcasGA2_TC012347 [Tribolium castaneum]

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/433 (53%), Positives = 294/433 (67%), Gaps = 43/433 (9%)

Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
           ++ RD  G + LM A+ KG +  V  LL   AD NA      ++L+ A+  G+ +IV  L
Sbjct: 75  VDDRDENGTTALMLAATKGRSAFVRELLAYGADANAEDCDSWTALLCASKEGHADIVLQL 134

Query: 276 VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADI 335
           ++  A +   D +   T L+WA  KG +++V +LL+ GA V+  G +    L        
Sbjct: 135 LEHNANIEHRD-MGNWTSLMWATYKGRIDVVHLLLEKGAEVNAHGNYHISSLL------- 186

Query: 336 FSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEM-KHFERQGVDPTFTFSSLLFVLVMHLS 394
                            W +G+ +   ++ E +  H  +  V                  
Sbjct: 187 -----------------WAAGRGYT--EITEALISHGAKVNVGD---------------K 212

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           YGTT LVWA RKG+ EIV +LLKAGANVD AG+Y WT LL+AT GNF EVV LLLEYKPN
Sbjct: 213 YGTTALVWASRKGYTEIVAMLLKAGANVDTAGMYSWTALLMATQGNFVEVVNLLLEYKPN 272

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           VNALDKDGC+ALTIACK+G  EI   L+ +GAYINIQDR GD+NLIHAVKGGHR  VE+L
Sbjct: 273 VNALDKDGCSALTIACKEGNNEIVTALIAAGAYINIQDRFGDTNLIHAVKGGHRACVESL 332

Query: 515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
           LKKY DVDI GK++KTA+Y +VEKGN+ I+KLLL+ANPDLEIATKDGDTPLLKAV++RN 
Sbjct: 333 LKKYADVDIAGKDQKTAIYMSVEKGNIAIVKLLLSANPDLEIATKDGDTPLLKAVRSRNA 392

Query: 575 EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPY 634
           E +Q+L+DKKAK++A DK+GDT LHIAMRARSK IVE+ +RNPK++ LLYRPN+AGETPY
Sbjct: 393 EIVQLLLDKKAKVSAADKKGDTALHIAMRARSKGIVEILLRNPKHSQLLYRPNRAGETPY 452

Query: 635 SIDMNNQKSILAQ 647
           +ID+N+QK+IL Q
Sbjct: 453 NIDINHQKTILGQ 465

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189240819|ref|XP_001811729.1| PREDICTED: similar to CG30387 CG30387-PB [Tribolium castaneum]

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 230/434 (52%), Positives = 294/434 (67%), Gaps = 43/434 (9%)

Query: 215 DLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVAL 274
            ++ RD  G + LM A+ KG +  V  LL   AD NA      ++L+ A+  G+ +IV  
Sbjct: 77  QVDDRDENGTTALMLAATKGRSAFVRELLAYGADANAEDCDSWTALLCASKEGHADIVLQ 136

Query: 275 LVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALAD 334
           L++  A +   D +   T L+WA  KG +++V +LL+ GA V+  G +    L       
Sbjct: 137 LLEHNANIEHRD-MGNWTSLMWATYKGRIDVVHLLLEKGAEVNAHGNYHISSLL------ 189

Query: 335 IFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEM-KHFERQGVDPTFTFSSLLFVLVMHL 393
                             W +G+ +   ++ E +  H  +  V                 
Sbjct: 190 ------------------WAAGRGY--TEITEALISHGAKVNVGD--------------- 214

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKP 453
            YGTT LVWA RKG+ EIV +LLKAGANVD AG+Y WT LL+AT GNF EVV LLLEYKP
Sbjct: 215 KYGTTALVWASRKGYTEIVAMLLKAGANVDTAGMYSWTALLMATQGNFVEVVNLLLEYKP 274

Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEA 513
           NVNALDKDGC+ALTIACK+G  EI   L+ +GAYINIQDR GD+NLIHAVKGGHR  VE+
Sbjct: 275 NVNALDKDGCSALTIACKEGNNEIVTALIAAGAYINIQDRFGDTNLIHAVKGGHRACVES 334

Query: 514 LLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRN 573
           LLKKY DVDI GK++KTA+Y +VEKGN+ I+KLLL+ANPDLEIATKDGDTPLLKAV++RN
Sbjct: 335 LLKKYADVDIAGKDQKTAIYMSVEKGNIAIVKLLLSANPDLEIATKDGDTPLLKAVRSRN 394

Query: 574 LEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP 633
            E +Q+L+DKKAK++A DK+GDT LHIAMRARSK IVE+ +RNPK++ LLYRPN+AGETP
Sbjct: 395 AEIVQLLLDKKAKVSAADKKGDTALHIAMRARSKGIVEILLRNPKHSQLLYRPNRAGETP 454

Query: 634 YSIDMNNQKSILAQ 647
           Y+ID+N+QK+IL Q
Sbjct: 455 YNIDINHQKTILGQ 468

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340725021|ref|XP_003400873.1| PREDICTED: kinase D-interacting substrate of 220 kDa-like [Bombus terrestris]

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/433 (54%), Positives = 299/433 (69%), Gaps = 43/433 (9%)

Query: 216  LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
            ++ RD  G + L+ A+ KG    V  L++  ADVNA    + ++L+ AA  G+T++   L
Sbjct: 639  IDDRDENGSTALILAATKGKIHFVRELINHGADVNAEDADNWTALLCAAKEGHTDVCLEL 698

Query: 276  VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADI 335
            ++ GA +   D + G T L+WA  KG    V +LL   A+V+  G +    L        
Sbjct: 699  LEHGADLEHRD-MGGWTALMWATYKGRSPTVMMLLGREADVNAHGNFHISSLL------- 750

Query: 336  FSEPGLATPLTVGLYAKWGSGKSFLLPKL-KEEMKHFERQGVDPTFTFSSLLFVLVMHLS 394
                             W +G+ +  P + K+ + H  +  V                  
Sbjct: 751  -----------------WAAGRGY--PDIVKDLIAHGAKVNVGD---------------K 776

Query: 395  YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            YGTT LVWA RKGHVEIVD LLKAGANVD AG+Y WT LLVATLGN  EVV LLLE+KPN
Sbjct: 777  YGTTALVWASRKGHVEIVDTLLKAGANVDTAGMYSWTALLVATLGNHLEVVLLLLEHKPN 836

Query: 455  VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
            VNALDKDGCTAL IAC++G++EIA  LLN+GAY+NIQDR+GD+NLIHAVKGGHRG+VE+L
Sbjct: 837  VNALDKDGCTALAIACREGHHEIANALLNAGAYVNIQDRAGDTNLIHAVKGGHRGVVESL 896

Query: 515  LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
            LKKY DVDI GK++KTA Y AVEKGN+ ILKLLL ANPDLEIATKDGDTPLL+AV++RN 
Sbjct: 897  LKKYADVDIAGKDKKTATYIAVEKGNISILKLLLNANPDLEIATKDGDTPLLRAVRSRNA 956

Query: 575  EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPY 634
            E +Q+L+DKKAK++A DK+GDTVLHIAMRARSK IVE+ +RNPKN+ LLYRPN+ GETPY
Sbjct: 957  EIVQILLDKKAKVSATDKKGDTVLHIAMRARSKAIVEILLRNPKNSQLLYRPNRQGETPY 1016

Query: 635  SIDMNNQKSILAQ 647
            +ID+N+ K+IL Q
Sbjct: 1017 NIDINHPKTILGQ 1029

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	651
FB|FBgn0261554	1678	CG42672 [Drosophila melanogast	0.388	0.150	0.711	7.4e-164
UNIPROTKB|E1BYB2	1728	KIDINS220 "Uncharacterized pro	0.619	0.233	0.456	2.6e-82
UNIPROTKB|E2R2M4	1414	KIDINS220 "Uncharacterized pro	0.388	0.178	0.592	9.9e-76
RGD|619949	1762	Kidins220 "kinase D-interactin	0.388	0.143	0.588	1.9e-75
UNIPROTKB|Q9ULH0	1771	KIDINS220 "Kinase D-interactin	0.388	0.142	0.592	2e-75
UNIPROTKB|F1PXC5	1772	KIDINS220 "Uncharacterized pro	0.388	0.142	0.592	2e-75
UNIPROTKB|E1BMF4	1770	LOC536267 "Uncharacterized pro	0.388	0.142	0.592	2.5e-75
ZFIN|ZDB-GENE-030131-7824	1731	kidins220b "kinase D-interacti	0.388	0.146	0.592	1e-74
WB|WBGene00006490	1481	kdin-1 [Caenorhabditis elegans	0.615	0.270	0.370	1.3e-61
UNIPROTKB|F6XSE4	2650	ANKHD1 "Uncharacterized protei	0.798	0.196	0.267	1.2e-29

FB|FBgn0261554 CG42672 [Drosophila melanogaster (taxid:7227)]

 Score = 937 (334.9 bits), Expect = 7.4e-164, Sum P(2) = 7.4e-164
 Identities = 180/253 (71%), Positives = 211/253 (83%)

Query:   395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
             YGTT LVWACR+G+VEIVD LLKAGANVD AG+Y WTPLLVA  G  T+ V  +LE KPN
Sbjct:   244 YGTTALVWACRRGNVEIVDTLLKAGANVDTAGMYSWTPLLVAAAGGHTDCVSSILEKKPN 303

Query:   455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
             VNALDKDG TAL IA ++G+ +IA  L+ +GAYINIQDR  D+ LIHAVK GHR +VEAL
Sbjct:   304 VNALDKDGMTALCIASREGFQDIAASLIAAGAYINIQDRGADTPLIHAVKAGHRTVVEAL 363

Query:   515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
             LKK+ DVDI GK+RKTA+YTAVEKG+ PI+KLLL  NPDLE ATKDGDTPLL+AV+ RNL
Sbjct:   364 LKKHADVDIQGKDRKTAIYTAVEKGHTPIVKLLLATNPDLESATKDGDTPLLRAVRNRNL 423

Query:   575 EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPY 634
             E + +L+D+KAK+TA DKRGDT LHIAMRARSKTIVE  +RNPK++ LLYR NKAGETPY
Sbjct:   424 EIVHLLLDRKAKVTASDKRGDTCLHIAMRARSKTIVEALLRNPKHSQLLYRANKAGETPY 483

Query:   635 SIDMNNQKSILAQ 647
             +ID  +QK+IL Q
Sbjct:   484 NIDSLHQKTILGQ 496

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|E1BYB2 KIDINS220 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 837 (299.7 bits), Expect = 2.6e-82, P = 2.6e-82
 Identities = 197/432 (45%), Positives = 267/432 (61%)

Query:   227 LMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGD 286
             L+  + +G+   +  LL+K  DV+       + L+ AA +G  EIV  L+KKGA  N+ D
Sbjct:     9 LLTYAEEGNVPALKALLEKCRDVDERNENGQTPLMLAAEQGNLEIVQELLKKGANCNLED 68

Query:   287 KVYGTTPLVWACRKGHVEIVDILLKAGANV---DVAGLWAYM-PLYS--SALADIFSEPG 340
                  T L+ A ++GH  IV  LL  G N+   D+ G  A M   Y   + +A +  E G
Sbjct:    69 -ADNWTALISAAKEGHEAIVAELLNYGVNLEHRDLGGWTALMWASYKGRTEVAKLLLEKG 127

Query:   341 LATPLTVGL-YAK----WGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSY 395
              A P   G+ Y+     W +G+         ++ H   Q        S           Y
Sbjct:   128 -ANPNITGMQYSVYPIIWAAGRGH------SDIVHLLLQH-GAKVNCSD---------KY 170

Query:   396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
             GTTPLVWA RKGH++ V  LL+ GA+VD  G    T L+VA  G +T+ V+ +L+  PNV
Sbjct:   171 GTTPLVWAARKGHLDCVKYLLQMGADVDQEGANSMTALIVAVKGGYTDSVKEILKRNPNV 230

Query:   456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
             N  DKDG TAL IA K+G+ EI   LL++G Y+NI DRSGD+ LI AV+GGH  IV ALL
Sbjct:   231 NLTDKDGNTALMIASKEGHTEIVQDLLDAGTYVNIPDRSGDTVLIGAVRGGHVEIVRALL 290

Query:   516 KKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLE 575
              KY D+DI G++ KTA+Y AVEKGN  +++ +L  NPD E  TKDG+TPL+KA K RN+E
Sbjct:   291 HKYADIDIRGQDNKTALYWAVEKGNATMVRDILQCNPDTETYTKDGETPLIKATKMRNIE 350

Query:   576 AIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYS 635
              +++L+DK AK++AVDK+GDT LHIA+R RS+ + E+ +RNPK+  LLYRPNKAGETPY+
Sbjct:   351 IVELLLDKGAKVSAVDKKGDTPLHIAIRGRSRKLAELLLRNPKDGRLLYRPNKAGETPYN 410

Query:   636 IDMNNQKSILAQ 647
             ID ++QKSIL Q
Sbjct:   411 IDCSHQKSILTQ 422

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0048813 "dendrite morphogenesis" evidence=IEA

UNIPROTKB|E2R2M4 KIDINS220 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 773 (277.2 bits), Expect = 9.9e-76, P = 9.9e-76
 Identities = 150/253 (59%), Positives = 193/253 (76%)

Query:   395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
             YGTTPLVWA RKGH+E V  LL  GA+VD  G    T L+VA  G +T+ V+ +L+  PN
Sbjct:   169 YGTTPLVWAARKGHLECVKHLLAMGADVDQEGANSMTALIVAVKGGYTQSVKEILKRNPN 228

Query:   455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
             VN  DKDG TAL IA K+G+ EI   LL++G Y+NI DRSGD+ LI AV+GGH  IV AL
Sbjct:   229 VNLTDKDGNTALMIASKEGHTEIVQDLLDAGTYVNIPDRSGDTVLIGAVRGGHVEIVRAL 288

Query:   515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
             L+KY D+DI G++ KTA+Y AVEKGN  +++ +L  NPD EI TKDG+TPL+KA K RN+
Sbjct:   289 LQKYADIDIRGQDNKTALYWAVEKGNATMVRDILQCNPDTEICTKDGETPLIKATKMRNI 348

Query:   575 EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPY 634
             E +++L+DK AK++AVDK+GDT LHIA+R RS+ + E+ +RNPK+  LLYRPNKAGETPY
Sbjct:   349 EVVELLLDKGAKVSAVDKKGDTPLHIAIRGRSRKLAELLLRNPKDGRLLYRPNKAGETPY 408

Query:   635 SIDMNNQKSILAQ 647
             +ID ++QKSIL Q
Sbjct:   409 NIDCSHQKSILTQ 421

GO:0048813 "dendrite morphogenesis" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

RGD|619949 Kidins220 "kinase D-interacting substrate 220" [Rattus norvegicus (taxid:10116)]

 Score = 773 (277.2 bits), Expect = 1.9e-75, P = 1.9e-75
 Identities = 149/253 (58%), Positives = 193/253 (76%)

Query:   395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
             YGTTPLVWA RKGH+E V  LL  GA+VD  G    T L+VA  G +T+ V+ +L+  PN
Sbjct:   169 YGTTPLVWAARKGHLECVKHLLAMGADVDQEGANSMTALIVAVKGGYTQSVKEILKRNPN 228

Query:   455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
             VN  DKDG TAL IA K+G+ EI   LL++G Y+NI DRSGD+ LI AV+GGH  IV AL
Sbjct:   229 VNLTDKDGNTALMIASKEGHIEIVQDLLDAGTYVNIPDRSGDTVLIGAVRGGHVEIVRAL 288

Query:   515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
             L+KY D+DI G++ KTA+Y AVEKGN  +++ +L  NPD EI TKDG+TPL+KA K RN+
Sbjct:   289 LQKYADIDIRGQDNKTALYWAVEKGNATMVRDILQCNPDTEICTKDGETPLIKATKMRNI 348

Query:   575 EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPY 634
             E +++L+DK AK++AVDK+GDT LH+A+R RS+ + E+ +RNPK+  LLYRPNKAGETPY
Sbjct:   349 EVVELLLDKGAKVSAVDKKGDTPLHVAIRGRSRRLAELLLRNPKDGRLLYRPNKAGETPY 408

Query:   635 SIDMNNQKSILAQ 647
             +ID ++QKSIL Q
Sbjct:   409 NIDCSHQKSILTQ 421

GO:0001701 "in utero embryonic development" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005829 "cytosol" evidence=TAS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019887 "protein kinase regulator activity" evidence=IDA

GO:0019901 "protein kinase binding" evidence=IDA

GO:0045859 "regulation of protein kinase activity" evidence=IDA

GO:0048813 "dendrite morphogenesis" evidence=ISO

UNIPROTKB|Q9ULH0 KIDINS220 "Kinase D-interacting substrate of 220 kDa" [Homo sapiens (taxid:9606)]

 Score = 773 (277.2 bits), Expect = 2.0e-75, P = 2.0e-75
 Identities = 150/253 (59%), Positives = 193/253 (76%)

Query:   395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
             YGTTPLVWA RKGH+E V  LL  GA+VD  G    T L+VA  G +T+ V+ +L+  PN
Sbjct:   169 YGTTPLVWAARKGHLECVKHLLAMGADVDQEGANSMTALIVAVKGGYTQSVKEILKRNPN 228

Query:   455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
             VN  DKDG TAL IA K+G+ EI   LL++G Y+NI DRSGD+ LI AV+GGH  IV AL
Sbjct:   229 VNLTDKDGNTALMIASKEGHTEIVQDLLDAGTYVNIPDRSGDTVLIGAVRGGHVEIVRAL 288

Query:   515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
             L+KY D+DI G++ KTA+Y AVEKGN  +++ +L  NPD EI TKDG+TPL+KA K RN+
Sbjct:   289 LQKYADIDIRGQDNKTALYWAVEKGNATMVRDILQCNPDTEICTKDGETPLIKATKMRNI 348

Query:   575 EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPY 634
             E +++L+DK AK++AVDK+GDT LHIA+R RS+ + E+ +RNPK+  LLYRPNKAGETPY
Sbjct:   349 EVVELLLDKGAKVSAVDKKGDTPLHIAIRGRSRKLAELLLRNPKDGRLLYRPNKAGETPY 408

Query:   635 SIDMNNQKSILAQ 647
             +ID ++QKSIL Q
Sbjct:   409 NIDCSHQKSILTQ 421

GO:0016021 "integral to membrane" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0048813 "dendrite morphogenesis" evidence=IEA

GO:0000186 "activation of MAPKK activity" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=TAS

UNIPROTKB|F1PXC5 KIDINS220 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 773 (277.2 bits), Expect = 2.0e-75, P = 2.0e-75
 Identities = 150/253 (59%), Positives = 193/253 (76%)

Query:   395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
             YGTTPLVWA RKGH+E V  LL  GA+VD  G    T L+VA  G +T+ V+ +L+  PN
Sbjct:   169 YGTTPLVWAARKGHLECVKHLLAMGADVDQEGANSMTALIVAVKGGYTQSVKEILKRNPN 228

Query:   455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
             VN  DKDG TAL IA K+G+ EI   LL++G Y+NI DRSGD+ LI AV+GGH  IV AL
Sbjct:   229 VNLTDKDGNTALMIASKEGHTEIVQDLLDAGTYVNIPDRSGDTVLIGAVRGGHVEIVRAL 288

Query:   515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
             L+KY D+DI G++ KTA+Y AVEKGN  +++ +L  NPD EI TKDG+TPL+KA K RN+
Sbjct:   289 LQKYADIDIRGQDNKTALYWAVEKGNATMVRDILQCNPDTEICTKDGETPLIKATKMRNI 348

Query:   575 EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPY 634
             E +++L+DK AK++AVDK+GDT LHIA+R RS+ + E+ +RNPK+  LLYRPNKAGETPY
Sbjct:   349 EVVELLLDKGAKVSAVDKKGDTPLHIAIRGRSRKLAELLLRNPKDGRLLYRPNKAGETPY 408

Query:   635 SIDMNNQKSILAQ 647
             +ID ++QKSIL Q
Sbjct:   409 NIDCSHQKSILTQ 421

GO:0048813 "dendrite morphogenesis" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

UNIPROTKB|E1BMF4 LOC536267 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 772 (276.8 bits), Expect = 2.5e-75, P = 2.5e-75
 Identities = 150/253 (59%), Positives = 193/253 (76%)

Query:   395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
             YGTTPLVWA RKGH+E V  LL  GA+VD  G    T L+VA  G +T+ V+ +L+  PN
Sbjct:   169 YGTTPLVWAARKGHLECVKHLLAMGADVDQEGANSMTALIVAVKGGYTQSVKEILKRNPN 228

Query:   455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
             VN  DKDG TAL IA K+G+ EI   LL++G Y+NI DRSGD+ LI AV+GGH  IV AL
Sbjct:   229 VNLTDKDGNTALMIASKEGHTEIVQDLLDAGTYVNIPDRSGDTVLIGAVRGGHVEIVRAL 288

Query:   515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
             L+KY D+DI G++ KTA+Y AVEKGN  +++ +L  NPD EI TKDG+TPL+KA K RN+
Sbjct:   289 LQKYADIDIRGQDSKTALYWAVEKGNATMVRDILQCNPDTEICTKDGETPLIKATKMRNI 348

Query:   575 EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPY 634
             E +++L+DK AK++AVDK+GDT LHIA+R RS+ + E+ +RNPK+  LLYRPNKAGETPY
Sbjct:   349 EVVELLLDKGAKVSAVDKKGDTPLHIAIRGRSRKLAELLLRNPKDGRLLYRPNKAGETPY 408

Query:   635 SIDMNNQKSILAQ 647
             +ID ++QKSIL Q
Sbjct:   409 NIDCSHQKSILTQ 421

GO:0048813 "dendrite morphogenesis" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

ZFIN|ZDB-GENE-030131-7824 kidins220b "kinase D-interacting substrate of 220b" [Danio rerio (taxid:7955)]

 Score = 766 (274.7 bits), Expect = 1.0e-74, P = 1.0e-74
 Identities = 150/253 (59%), Positives = 191/253 (75%)

Query:   395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
             YGTTPL+WA RKGH + V  LL+ GA+VD  G    T L+VA  G +TEVV+ LL+  PN
Sbjct:   178 YGTTPLIWAARKGHYDCVMHLLENGADVDQEGANSMTALIVAVKGGYTEVVKELLKRNPN 237

Query:   455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
             VN  DKDG TAL IA K+GY EI   LL++G Y+NI DRSGD+ LI AV+GGH  IV AL
Sbjct:   238 VNMTDKDGNTALMIAAKEGYTEIVQDLLDAGTYVNIPDRSGDTVLIGAVRGGHVEIVRAL 297

Query:   515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
             L KY D+DI G+E KTA+Y AVEKGN  +++ +L  +PD E  TKD +TPL+KA K R++
Sbjct:   298 LHKYADIDIRGQENKTALYWAVEKGNATMVRDILQCSPDTETTTKDSETPLIKATKMRSI 357

Query:   575 EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPY 634
             E +++L+DK AK++AVDKRGDT LHIA+R RS+ + E+ +RNPK+  LLYRPNKAGETPY
Sbjct:   358 EVVELLLDKGAKVSAVDKRGDTPLHIAIRGRSRRLAELLLRNPKDGRLLYRPNKAGETPY 417

Query:   635 SIDMNNQKSILAQ 647
             +ID ++QKSIL Q
Sbjct:   418 NIDCSHQKSILTQ 430

GO:0030165 "PDZ domain binding" evidence=IPI

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

WB|WBGene00006490 kdin-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 642 (231.1 bits), Expect = 1.3e-61, P = 1.3e-61
 Identities = 152/410 (37%), Positives = 231/410 (56%)

Query:   238 TVALLLDKNADVNAHGNYHISSLIWAAGR-GYTEIVALLVKKGAK-VNVGDKVYGTTPLV 295
             T  L     A+++A  N +  SL+  A R G T +   L +     ++  D   G + L+
Sbjct:    43 TTELRCALTAEISALRNANGESLLTVAVRSGNTAVAKQLAQLDPDAIDETDNE-GWSALL 101

Query:   296 WACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGS 355
              A   GHV+IV +L+  GA+VD   L  + PL  +   +      L   +    +     
Sbjct:   102 NAAHCGHVDIVRLLIDNGASVDQPDLMGWSPLMWAVYKNHLDVVDLL--VNAKAHVNLID 159

Query:   356 GKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDIL 415
              +  L P +    + F  Q V+        +        +G+T L+WA RKGH+ +V +L
Sbjct:   160 EEDGLTPLIVASGRGFS-QIVERLIDSDCQVNACD---KFGSTALIWAARKGHLPVVQLL 215

Query:   416 LKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYY 475
             L +GA VD  G+Y  T L++AT GNF +VVELLL  +PNVN  D++G TAL +A +DGY 
Sbjct:   216 LNSGAEVDAVGMYSSTALMLATRGNFIQVVELLLTREPNVNVADQNGLTALGMAARDGYA 275

Query:   476 EIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTA 535
             +I   L+NSGA++N  DR G+  L  AV+ G+  IV  +L K+ D++    E++T ++ A
Sbjct:   276 DICESLINSGAFVNQCDRFGNWILTSAVRSGNAAIVRMILDKFADINCQDSEKRTPLHLA 335

Query:   536 VEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGD 595
             ++K    I  +LL   P+LE+  KDG+TPLL+A K R++     L+   AK+ AVD  GD
Sbjct:   336 IDKSFNDIAYILLEKKPNLELKNKDGETPLLRAAKCRHVHLCTYLMSFGAKLAAVDNCGD 395

Query:   596 TVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSIL 645
               LH+A+RARS+ + +  + NP ++ LLYRPNK G+TPYSID++N + IL
Sbjct:   396 NALHLALRARSRRLTQALLSNPSDSRLLYRPNKLGQTPYSIDLSNPQPIL 445

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006418 "tRNA aminoacylation for protein translation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0002009 "morphogenesis of an epithelium" evidence=IMP

GO:0010171 "body morphogenesis" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

UNIPROTKB|F6XSE4 ANKHD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 366 (133.9 bits), Expect = 1.2e-29, P = 1.2e-29
 Identities = 154/576 (26%), Positives = 258/576 (44%)

Query:    43 PGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTA 102
             P  +R+L+ +++        + TR +  +N H + +    ++  A   G+V  ++ LL  
Sbjct:   164 PEVLRRLTSSVSCALDEAAAALTR-MRAENSHNAGQVDTRSLAEACSDGDVNAVRKLLDE 222

Query:   103 NPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGG-TAL 161
                +   T+     +S+  LC      Y      +  Q  L     V +DR + G  T L
Sbjct:   223 GRSVNEHTE---EGESL--LCLACSAGYY-----ELAQVLLAMHANV-EDRGNKGDITPL 271

Query:   162 MFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDM 221
             M A+  G L  V+ L+   ADVN++     + LTYA   G+ D+   LL+ GA++E  + 
Sbjct:   272 MAASSGGYLDIVKLLLLHDADVNSQSATGNTALTYACAGGFVDIVKVLLNEGANIEDHNE 331

Query:   222 GGWSPLMWASYKGHTDTVALLLDKNADVNAHGN-YHISSLIWAAGRGYTEIVALLVKKGA 280
              G +PLM A+  GH +   +LLD  A +N H N +  S+L  A  +G+ ++V  L+  GA
Sbjct:   332 NGHTPLMEAASAGHVEVARVLLDHGAGINTHSNEFKESALTLACYKGHLDMVRFLLDAGA 391

Query:   281 -KVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSA------LA 333
              + +  D+++  T L+ AC  GHVE+  +LL +GA V++       PL  +A      LA
Sbjct:   392 DQEHKTDEMH--TALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELA 449

Query:   334 DIFSEPGLA---------TPLTVGLYAKWGSGKSFLLPK-LKEEMKHFERQGVDPTFT-- 381
              +  E G           TPL            + LL +      +  E Q    T    
Sbjct:   450 ALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACC 509

Query:   382 --FSSLLFVLVM---HLSYG-TTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLV 435
               FS +   L+     +  G +TPL+ A ++GH+E+V  LL AGANV        T L  
Sbjct:   510 GGFSEVADFLIKAGADIELGCSTPLMEASQEGHLELVKYLLAAGANVHATTATGDTALTY 569

Query:   436 ATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSG 495
             A     T+V ++LL+   +++   +D  T L     +G        ++   +   +   G
Sbjct:   570 ACENGHTDVADVLLQAGADLDK-QEDMKTIL-----EG--------IDPAKHQEHESEGG 615

Query:   496 DSNLIHAVKGGHRGIVEALLKKYVDVD-IPGKERKTAVYTAVEKGNVPILKLLLTANPDL 554
              + L+ A + GH   V+ L+ K  +V+        T V  A   G++ +++LLL    D 
Sbjct:   616 RTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADP 675

Query:   555 EIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAV 590
                 KDG T L++A K  +   +  L+D    + +V
Sbjct:   676 THRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSV 711

GO:0003723 "RNA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	651
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-34
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-33
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-33
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-29
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-29
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-27
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-26
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-26
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-24
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	3e-24
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-22
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-21
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-19
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	2e-18
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-18
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	6e-18
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	7e-18
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	1e-17
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	2e-17
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	5e-17
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	6e-17
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	9e-17
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	4e-16
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	8e-16
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	7e-15
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	7e-15
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	1e-14
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-14
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-14
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	2e-14
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	3e-14
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	4e-14
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	6e-14
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-13
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	7e-13
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	8e-13
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	9e-13
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	1e-12
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	2e-12
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	2e-12
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	4e-12
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	7e-12
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	8e-12
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	8e-12
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	9e-12
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	1e-11
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	1e-11
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	1e-11
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	2e-11
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	5e-11
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	9e-11
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	2e-10
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	2e-10
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	3e-10
pfam07693	301	pfam07693, KAP_NTPase, KAP family P-loop domain	5e-10
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	1e-09
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	1e-09
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	2e-09
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	3e-09
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	4e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	5e-09
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	7e-09
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	7e-09
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	7e-09
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	8e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-08
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	3e-08
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	7e-08
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	7e-08
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	9e-08
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-07
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	1e-07
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	2e-07
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	2e-07
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	2e-07
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	4e-07
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	4e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	5e-07
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	6e-07
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	8e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	8e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	8e-07
pfam00023	33	pfam00023, Ank, Ankyrin repeat	8e-07
pfam00023	33	pfam00023, Ank, Ankyrin repeat	8e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	3e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	3e-06
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	3e-06
pfam00023	33	pfam00023, Ank, Ankyrin repeat	3e-06
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	4e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	4e-06
PHA02946	446	PHA02946, PHA02946, ankyin-like protein; Provision	5e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	6e-06
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	6e-06
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	7e-06
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	8e-06
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	9e-06
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	2e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	5e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	5e-05
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	5e-05
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	7e-05
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	7e-05
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	7e-05
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	7e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	8e-05
smart00248	30	smart00248, ANK, ankyrin repeats	9e-05
smart00248	30	smart00248, ANK, ankyrin repeats	9e-05
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	1e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	1e-04
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	2e-04
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	3e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	3e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	3e-04
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	3e-04
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	5e-04
smart00248	30	smart00248, ANK, ankyrin repeats	5e-04
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	0.001
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	0.001
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	0.001
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.001
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.001
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	0.001
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	0.001
PHA02989	494	PHA02989, PHA02989, ankyrin repeat protein; Provis	0.001
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	0.002
PHA02946	446	PHA02946, PHA02946, ankyin-like protein; Provision	0.002
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	0.003
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.004

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  125 bits (317), Expect = 4e-34
 Identities = 55/126 (43%), Positives = 75/126 (59%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
           + RD++G T L  AA  G L  V+ L+  GADVNA+DND  +PL  AA+ G+ ++   LL
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 211 DHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTE 270
           + GAD+  RD  G +PL  A+  G+ D V LLL   ADVNA      + L  AA  G+ E
Sbjct: 61  EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLE 120

Query: 271 IVALLV 276
           +V LL+
Sbjct: 121 VVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  124 bits (312), Expect = 2e-33
 Identities = 51/122 (41%), Positives = 72/122 (59%)

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKP 453
             G TPL  A   GH+E+V +LL+ GA+V+       TPL +A      E+V+LLLE   
Sbjct: 5   EDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGA 64

Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEA 513
           +VNA DKDG T L +A ++G  ++  LLL  GA +N +D+ G + L  A K GH  +V+ 
Sbjct: 65  DVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKL 124

Query: 514 LL 515
           LL
Sbjct: 125 LL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  123 bits (311), Expect = 3e-33
 Identities = 57/127 (44%), Positives = 76/127 (59%), Gaps = 1/127 (0%)

Query: 184 NAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLL 243
           NA D D  +PL  AA  G+ +V   LL++GAD+  +D  G +PL  A+  GH + V LLL
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 244 DKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHV 303
           +K ADVNA      + L  AA  G  ++V LL+K GA VN  DK  G TPL  A + GH+
Sbjct: 61  EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDK-DGRTPLHLAAKNGHL 119

Query: 304 EIVDILL 310
           E+V +LL
Sbjct: 120 EVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  113 bits (284), Expect = 1e-29
 Identities = 51/126 (40%), Positives = 75/126 (59%)

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           NA D+DG T L +A  +G+ E+  LLL +GA +N +D  G + L  A K GH  IV+ LL
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 516 KKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLE 575
           +K  DV+   K+  T ++ A   GN+ ++KLLL    D+    KDG TPL  A K  +LE
Sbjct: 61  EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLE 120

Query: 576 AIQMLI 581
            +++L+
Sbjct: 121 VVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  112 bits (281), Expect = 3e-29
 Identities = 49/121 (40%), Positives = 74/121 (61%)

Query: 428 YCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAY 487
              TPL +A      EVV+LLLE   +VNA D DG T L +A K+G+ EI  LLL  GA 
Sbjct: 6   DGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGAD 65

Query: 488 INIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLL 547
           +N +D+ G++ L  A + G+  +V+ LLK   DV+   K+ +T ++ A + G++ ++KLL
Sbjct: 66  VNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLL 125

Query: 548 L 548
           L
Sbjct: 126 L 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  106 bits (266), Expect = 4e-27
 Identities = 41/126 (32%), Positives = 70/126 (55%)

Query: 489 NIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLL 548
           N +D  G + L  A   GH  +V+ LL+   DV+    + +T ++ A + G++ I+KLLL
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 549 TANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKT 608
               D+    KDG+TPL  A +  NL+ +++L+   A + A DK G T LH+A +     
Sbjct: 61  EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLE 120

Query: 609 IVEVFI 614
           +V++ +
Sbjct: 121 VVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  104 bits (262), Expect = 1e-26
 Identities = 50/117 (42%), Positives = 68/117 (58%), Gaps = 1/117 (0%)

Query: 127 LQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAE 186
           L    +  +L+ ++  LEN   V + +D++G T L  AA+ G L  V+ L+ +GADVNA 
Sbjct: 11  LHLAASNGHLEVVKLLLENGADV-NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNAR 69

Query: 187 DNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLL 243
           D D  +PL  AAR G  DV   LL HGAD+  RD  G +PL  A+  GH + V LLL
Sbjct: 70  DKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  104 bits (261), Expect = 2e-26
 Identities = 50/111 (45%), Positives = 66/111 (59%), Gaps = 1/111 (0%)

Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
            RD  G +PL  A+  GH + V LLL+  ADVNA  N   + L  AA  G+ EIV LL++
Sbjct: 2   ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLE 61

Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLY 328
           KGA VN  DK  G TPL  A R G++++V +LLK GA+V+        PL+
Sbjct: 62  KGADVNARDK-DGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLH 111

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 97.3 bits (243), Expect = 2e-24
 Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 2/91 (2%)

Query: 161 LMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRD 220
           L  AA+ G L  V+ L+ +GADVN  D D  + L  AAR G  ++   LL+HGAD+  +D
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 221 MGGWSPLMWASYKGHTDTVALLLDKNADVNA 251
             G + L  A+  G+ + V LLL+  AD+N 
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADINL 89

Length = 91

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score =  105 bits (264), Expect = 3e-24
 Identities = 81/257 (31%), Positives = 116/257 (45%), Gaps = 33/257 (12%)

Query: 397 TTPLVWACRKGHVEIVDILLKAGANVD--VAGLYCWTPLLVATLGNFTEVVE---LLLEY 451
             PL  A    ++++V ILL  GA+++            L     N T+V E   LLLEY
Sbjct: 36  VLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEY 95

Query: 452 KPNVNALDKDGCTALTIA--CKDGYYEIAVLLLNSGAYINIQDRSGDSNLIH-AVKGGHR 508
             NVNA D +G T L  A   K   Y I   LL++GA +NI++  G+ NL+H  ++    
Sbjct: 96  GANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGE-NLLHLYLESNKI 154

Query: 509 --GIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLL 566
              I++ L+ K VD++      K  V              LL+    + I    G TPL 
Sbjct: 155 DLKILKLLIDKGVDINA-----KNRV------------NYLLSYGVPINIKDVYGFTPLH 197

Query: 567 KAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN-----PKNNI 621
            AV   N E ++ L+D  A    V+K GDT LHIA+   +K I ++ + N          
Sbjct: 198 YAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKTIIET 257

Query: 622 LLYRPNKAGETPYSIDM 638
           LLY  +K   T   I M
Sbjct: 258 LLYFKDKDLNTITKIKM 274

Length = 422

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 92.3 bits (230), Expect = 1e-22
 Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 3/92 (3%)

Query: 227 LMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGD 286
           L  A+  G+ + V LLL+K ADVN       ++L  AA  G  EIV LL++ GA VN  D
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 287 KVYGTTPLVWACRKGHVEIVDILLKAGANVDV 318
           K  G T L  A R G++EIV +LL+ GA++++
Sbjct: 59  K-DGNTALHLAARNGNLEIVKLLLEHGADINL 89

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 89.2 bits (222), Expect = 1e-21
 Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 2/93 (2%)

Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L  A + G++E+V +LL+ GA+V++      T L +A      E+V+LLLE+  +VNA D
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNL--GDTDTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           KDG TAL +A ++G  EI  LLL  GA IN++D
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 82.3 bits (204), Expect = 4e-19
 Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 2/91 (2%)

Query: 194 LTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHG 253
           L  AA+ G  ++   LL+ GAD+   D    + L  A+  G+ + V LLL+  ADVNA  
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 254 NYHISSLIWAAGRGYTEIVALLVKKGAKVNV 284
               ++L  AA  G  EIV LL++ GA +N+
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADINL 89

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 84.5 bits (208), Expect = 2e-18
 Identities = 47/144 (32%), Positives = 68/144 (47%), Gaps = 9/144 (6%)

Query: 184 NAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHT-----DT 238
            A D D   PL  AA +G   +   LL  GAD+  +D  G +PL  A+  G+      + 
Sbjct: 67  AARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEV 126

Query: 239 VALLLDKNA---DVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLV 295
             LLL+  A     N       + L WAA  G  +IV LL++ GA  N  +  YG T L 
Sbjct: 127 AKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNS-YGVTALD 185

Query: 296 WACRKGHVEIVDILLKAGANVDVA 319
            A + G +E+V +LL  G ++ + 
Sbjct: 186 PAAKNGRIELVKLLLDKGLHLSLL 209

Length = 235

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 80.5 bits (199), Expect = 4e-18
 Identities = 34/112 (30%), Positives = 64/112 (57%), Gaps = 3/112 (2%)

Query: 522 DIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLI 581
           +   ++ +T ++ A   G++ ++KLLL    D+     DG TPL  A K  +LE +++L+
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 582 DKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP 633
           +K A + A DK G+T LH+A R  +  +V++ +++  +   +   +K G TP
Sbjct: 61  EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGAD---VNARDKDGRTP 109

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 83.3 bits (205), Expect = 6e-18
 Identities = 57/137 (41%), Positives = 75/137 (54%), Gaps = 8/137 (5%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREG-----YTDV 205
             RD +G   L  AA KG    V+ L+  GADVNA+D D  +PL  AA  G       +V
Sbjct: 67  AARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEV 126

Query: 206 CAELLDHGADLE---HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIW 262
              LL+ GADL+    RD  G +PL WA+  G  D V LLL+  AD N+  +Y +++L  
Sbjct: 127 AKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDP 186

Query: 263 AAGRGYTEIVALLVKKG 279
           AA  G  E+V LL+ KG
Sbjct: 187 AAKNGRIELVKLLLDKG 203

Length = 235

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 86.2 bits (213), Expect = 7e-18
 Identities = 62/239 (25%), Positives = 111/239 (46%), Gaps = 13/239 (5%)

Query: 410 EIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIA 469
           +++  +L  G +V++      T L  A      E +++L EY  +VN  D +GC  + IA
Sbjct: 105 DMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIA 164

Query: 470 CKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERK 529
            K  +++I  LLL  GAY N++D +G+S L +A + G    ++ L+     +    K   
Sbjct: 165 IKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGF 224

Query: 530 TAVYTAV--EKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTR-NLEAIQMLIDKKAK 586
           T ++ A+   +  +     LL  N  +     DG TPL  A+    +++ I +L+  KA 
Sbjct: 225 TPLHNAIIHNRSAIE----LLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKAD 280

Query: 587 ITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSIL 645
           I+  D +G+  +  A +  +K  V   I++   N +L    +A +   S D      I 
Sbjct: 281 ISIKDNKGENPIDTAFKYINKDPV---IKDIIANAVLI--KEADKLKDS-DFLEHIEIK 333

Length = 434

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 85.4 bits (211), Expect = 1e-17
 Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 11/225 (4%)

Query: 397 TTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVN 456
           TTPL+ A R G  +IV++ +K GA+++        PLL A      ++++LL+      N
Sbjct: 36  TTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLI-----DN 90

Query: 457 ALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLK 516
            +D    + L I C +   ++   +L+ G  +NI+D    + L +A+K G    ++ L +
Sbjct: 91  GVDT---SILPIPCIEK--DMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFE 145

Query: 517 KYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEA 576
              DV+I        ++ A++     I+KLLL       +   +G++PL  A +  +   
Sbjct: 146 YGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYAC 205

Query: 577 IQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNI 621
           I++LID    I    K G T LH A+   +++ +E+ I N   N 
Sbjct: 206 IKLLIDHGNHIMNKCKNGFTPLHNAI-IHNRSAIELLINNASIND 249

Length = 434

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 85.5 bits (211), Expect = 2e-17
 Identities = 97/353 (27%), Positives = 157/353 (44%), Gaps = 15/353 (4%)

Query: 166 QKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWS 225
           Q+ +L     L+  GADVNA+D    +P+ YAA  G   +   LL +GAD+    +   S
Sbjct: 154 QQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLS 213

Query: 226 PLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVG 285
            L  A    + DT+  ++D  +++N +      SL+ A      E   LL   G  VN  
Sbjct: 214 VLECAVDSKNIDTIKAIIDNRSNINKND----LSLLKAIRNEDLETSLLLYDAGFSVNSI 269

Query: 286 DKVYGTTPLVWACRKGHV-EIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATP 344
           D     TPL  A +   +  +V  LL+ GA+V+   +    PLY  A  + +    + T 
Sbjct: 270 D-DCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMA-KNGYDTENIRTL 327

Query: 345 LTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWAC 404
           + +G  A   +     +  L  +    +R   D   T   L   +        TP+ +A 
Sbjct: 328 IMLG--ADVNAADRLYITPL-HQASTLDRNK-DIVITLLELGANVNARDYCDKTPIHYAA 383

Query: 405 RKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLG-NFTEVVELLLEYKPNVNALDKDGC 463
            + +V I++ LL  GA+++       T L  A  G N    V+ L++   NVN+ +KD  
Sbjct: 384 VRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLS 443

Query: 464 TALTIACKDG-YYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           T L  ACK     ++  +LL++GA +N  +      L+ A+   + GIV  LL
Sbjct: 444 TPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIAL--EYHGIVNILL 494

Length = 682

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 76.1 bits (188), Expect = 5e-17
 Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 3/90 (3%)

Query: 131 IAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDN 190
               NL+ ++  LE     AD    +  TAL  AA+ G L  V+ L+  GADVNA+D D 
Sbjct: 5   AKNGNLELVKLLLEKG---ADVNLGDTDTALHLAARNGNLEIVKLLLEHGADVNAKDKDG 61

Query: 191 WSPLTYAAREGYTDVCAELLDHGADLEHRD 220
            + L  AAR G  ++   LL+HGAD+  +D
Sbjct: 62  NTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 75.8 bits (187), Expect = 6e-17
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L  A K G+  +V+ LL+K  DV++   +  TA++ A   GN+ I+KLLL    D+    
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNL--GDTDTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVD 591
           KDG+T L  A +  NLE +++L++  A I   D
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 84.0 bits (207), Expect = 9e-17
 Identities = 90/378 (23%), Positives = 171/378 (45%), Gaps = 67/378 (17%)

Query: 81  KTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQ 140
            T ++ A E+GN  ++ LLL+   D+ I        D +       L+  +   N+D+++
Sbjct: 179 ITPIHYAAERGNAKMVNLLLSYGADVNIIA-----LDDLS-----VLECAVDSKNIDTIK 228

Query: 141 TFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAARE 200
             ++N+  +  +++D    +L+ A +   L     L   G  VN+ D+   +PL +A++ 
Sbjct: 229 AIIDNRSNI--NKND---LSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQA 283

Query: 201 -GYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGH-TDTVALLLDKNADVNAHGNYHIS 258
              + +  +LL+ GAD+  +++ G +PL   +  G+ T+ +  L+   ADVNA    +I+
Sbjct: 284 PSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYIT 343

Query: 259 SLIWAAGRG-YTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
            L  A+      +IV  L++ GA VN  D     TP+ +A  + +V I++ LL  GA+++
Sbjct: 344 PLHQASTLDRNKDIVITLLELGANVNARD-YCDKTPIHYAAVRNNVVIINTLLDYGADIE 402

Query: 318 VAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVD 377
                                          L  K G+              HF   G +
Sbjct: 403 ------------------------------ALSQKIGT------------ALHFALCGTN 420

Query: 378 PTFTFSSLL---FVLVMHLSYGTTPLVWACRKG-HVEIVDILLKAGANVDVAGLYCWTPL 433
           P  +  +L+     +       +TPL +AC+K   ++++++LL  GA+V+   +    PL
Sbjct: 421 PYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPL 480

Query: 434 LVATLGNFTEVVELLLEY 451
           L+A    +  +V +LL Y
Sbjct: 481 LIAL--EYHGIVNILLHY 496

Length = 682

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 80.5 bits (199), Expect = 4e-16
 Identities = 61/240 (25%), Positives = 97/240 (40%), Gaps = 32/240 (13%)

Query: 85  YTAVEKGNVPILKLLLT--ANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTF 142
           Y A E  N+ ++K+LL   A+ +           ++   L Y +   Y   D  + ++  
Sbjct: 40  YLAKEARNIDVVKILLDNGADINSST-------KNNSTPLHYLSNIKYNLTDVKEIVKLL 92

Query: 143 LENKRTVADDRDDNGGTALMFAAQK--GKLSFVRELVTRGADVNAEDNDNWSPLTYAARE 200
           LE    V +  D+NG T L++A  K     S V  L+  GA+VN +++D  + L      
Sbjct: 93  LEYGANV-NAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLES 151

Query: 201 GYTD--VCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHIS 258
              D  +   L+D G D+                    + V  LL     +N    Y  +
Sbjct: 152 NKIDLKILKLLIDKGVDINA-----------------KNRVNYLLSYGVPINIKDVYGFT 194

Query: 259 SLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDV 318
            L +A      E V  L+  GA  N+ +K YG TPL  A    + EI  +LL  G ++  
Sbjct: 195 PLHYAVYNNNPEFVKYLLDLGANPNLVNK-YGDTPLHIAILNNNKEIFKLLLNNGPSIKT 253

Length = 422

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 72.7 bits (179), Expect = 8e-16
 Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 2/91 (2%)

Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           L +A      E+V+LLLE   +VN  D D  TAL +A ++G  EI  LLL  GA +N +D
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDI 523
           + G++ L  A + G+  IV+ LL+   D+++
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADINL 89

Length = 91

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 71.3 bits (175), Expect = 7e-15
 Identities = 49/201 (24%), Positives = 71/201 (35%), Gaps = 77/201 (38%)

Query: 10  RDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLL 69
           RD  G + L  A   GH  +V+ LL+   DV+                            
Sbjct: 3   RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAK-------------------------- 36

Query: 70  DKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQS 129
           D +         T ++ A + G++ I+KLLL    D+                       
Sbjct: 37  DNDGR-------TPLHLAAKNGHLEIVKLLLEKGADV----------------------- 66

Query: 130 YIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDND 189
                                + RD +G T L  AA+ G L  V+ L+  GADVNA D D
Sbjct: 67  ---------------------NARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKD 105

Query: 190 NWSPLTYAAREGYTDVCAELL 210
             +PL  AA+ G+ +V   LL
Sbjct: 106 GRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 77.4 bits (191), Expect = 7e-15
 Identities = 68/241 (28%), Positives = 110/241 (45%), Gaps = 23/241 (9%)

Query: 409 VEIVDILLKAGANVDVAGLYCWTPL---LVATLGNFTEVVELLLEYKPNVNALDKDGCTA 465
           VE V  LL AGA+V+  G Y  TPL   L  +     ++V LLLE   +VNA ++ G T 
Sbjct: 27  VEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTP 86

Query: 466 L-TIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGG---HRGIVEALLKKYVDV 521
           L          ++  LL+ +GA +N +D+ G    +H    G   +  ++  LL+K  DV
Sbjct: 87  LHLYLYNATTLDVIKLLIKAGADVNAKDKVGR-TPLHVYLSGFNINPKVIRLLLRKGADV 145

Query: 522 DIPGKERKTAVYTAVEKGNVPI--LKLLLTANPDLEIATKD--GDTPL---LKAVKTRNL 574
           +       T +   ++  N  +  L+LL+ A  D  +   D    + L   L++ K R  
Sbjct: 146 NALDLYGMTPLAVLLKSRNANVELLRLLIDAGAD--VYAVDDRFRSLLHHHLQSFKPRA- 202

Query: 575 EAIQMLIDKKAKITAVDKRGDTVLH-IAMRARSK-TIVEVFIRNPKNNILLYRPNKAGET 632
             ++ LI       A D  G+T LH +A  +  K ++V   +      I +   N+ G+T
Sbjct: 203 RIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLI---AGISINARNRYGQT 259

Query: 633 P 633
           P
Sbjct: 260 P 260

Length = 471

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 75.9 bits (187), Expect = 1e-14
 Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 24/188 (12%)

Query: 169 KLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYT-----DVCAELLDHGADLEHRDMGG 223
            +  V+ L+  GAD+N+   +N +PL Y +   Y      ++   LL++GA++   D  G
Sbjct: 47  NIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNG 106

Query: 224 WSPLMWASYK--GHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGY--TEIVALLVKKG 279
            +PL++A  K       V  LLD  A+VN   +   + L           +I+ LL+ KG
Sbjct: 107 ITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKG 166

Query: 280 AKVNVGDKV---------------YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAY 324
             +N  ++V               YG TPL +A    + E V  LL  GAN ++   +  
Sbjct: 167 VDINAKNRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGD 226

Query: 325 MPLYSSAL 332
            PL+ + L
Sbjct: 227 TPLHIAIL 234

Length = 422

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 68.8 bits (169), Expect = 2e-14
 Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 466 LTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPG 525
           L +A K+G  E+  LLL  GA +N+ D   D+ L  A + G+  IV+ LL+   DV+   
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDT--DTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 526 KERKTAVYTAVEKGNVPILKLLLTANPDLEI 556
           K+  TA++ A   GN+ I+KLLL    D+ +
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADINL 89

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 68.4 bits (168), Expect = 2e-14
 Identities = 24/62 (38%), Positives = 36/62 (58%)

Query: 398 TPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNA 457
           T L  A R G++EIV +LL+ GA+V+       T L +A      E+V+LLLE+  ++N 
Sbjct: 30  TALHLAARNGNLEIVKLLLEHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADINL 89

Query: 458 LD 459
            D
Sbjct: 90  KD 91

Length = 91

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 75.9 bits (187), Expect = 2e-14
 Identities = 77/292 (26%), Positives = 116/292 (39%), Gaps = 57/292 (19%)

Query: 237 DTVALLLDKNADVNAHGNYHISSLIWAAGRGYT-----EIVALLVKKGAKVNVGDKVYGT 291
           D V +LLD  AD+N+    + + L + +   Y      EIV LL++ GA VN  D   G 
Sbjct: 49  DVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDN-NGI 107

Query: 292 TPLVWA--CRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGL 349
           TPL++A   +     IV+ LL  GANV++        L+                    L
Sbjct: 108 TPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLH--------------------L 147

Query: 350 YAKWGSGK----SFLLPK-----LKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPL 400
           Y +           L+ K      K  + +    GV           + +  + YG TPL
Sbjct: 148 YLESNKIDLKILKLLIDKGVDINAKNRVNYLLSYGVP----------INIKDV-YGFTPL 196

Query: 401 VWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNAL-- 458
            +A    + E V  LL  GAN ++   Y  TPL +A L N  E+ +LLL   P++  +  
Sbjct: 197 HYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKTIIE 256

Query: 459 ------DKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVK 504
                 DKD  T   I        + + LL+ G Y N +      +L   + 
Sbjct: 257 TLLYFKDKDLNTITKIKML-KKSIMYMFLLDPGFYKNRKLIENSKSLKDVIN 307

Length = 422

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 74.6 bits (183), Expect = 3e-14
 Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 7/221 (3%)

Query: 407 GHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYK--PNVNALDKDGCT 464
           G ++I   LL  G N +       +P+ +A     +E ++LL+++   P+V   D +  +
Sbjct: 13  GELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIE--S 70

Query: 465 ALTIACKDGYYEIAVLLLNSGAYIN-IQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDI 523
            L  A ++G  +    LL+ G + + +  + G + L  A       I++ L+ +  D DI
Sbjct: 71  ELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDI 130

Query: 524 PGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDK 583
           P  ++ + ++ AV  G++  ++LL+     L+I    G TPL+ A+   ++   +ML+D 
Sbjct: 131 PNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDS 190

Query: 584 KAKITAVDKRGD-TVLHIAMRARSKTIVEVFI-RNPKNNIL 622
            A I    K G    L  A+      IV +FI R    NI+
Sbjct: 191 GANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIM 231

Length = 413

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 75.5 bits (185), Expect = 4e-14
 Identities = 95/367 (25%), Positives = 160/367 (43%), Gaps = 50/367 (13%)

Query: 241 LLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRK 300
           +LL+  ADVNA   Y I+ + +AA RG  ++V LL+  GA VN+   +   + L  A   
Sbjct: 163 MLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNI-IALDDLSVLECAVDS 221

Query: 301 GHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFL 360
            +++ +  ++   +N++   L         +L        L T L   LY          
Sbjct: 222 KNIDTIKAIIDNRSNINKNDL---------SLLKAIRNEDLETSLL--LY---------- 260

Query: 361 LPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHV-EIVDILLKAG 419
                           D  F+ +S+            TPL  A +   +  +V  LL+ G
Sbjct: 261 ----------------DAGFSVNSID-------DCKNTPLHHASQAPSLSRLVPKLLERG 297

Query: 420 ANVDVAGLYCWTPL-LVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACK-DGYYEI 477
           A+V+   +   TPL L+A  G  TE +  L+    +VNA D+   T L  A   D   +I
Sbjct: 298 ADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDI 357

Query: 478 AVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVE 537
            + LL  GA +N +D    + + +A    +  I+  LL    D++   ++  TA++ A+ 
Sbjct: 358 VITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALC 417

Query: 538 KGNVPI-LKLLLTANPDLEIATKDGDTPLLKAVKTR-NLEAIQMLIDKKAKITAVDKRGD 595
             N  + +K L+    ++    KD  TPL  A K    L+ I+ML+D  A + A++ +  
Sbjct: 418 GTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQ 477

Query: 596 TVLHIAM 602
             L IA+
Sbjct: 478 YPLLIAL 484

Length = 682

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 74.3 bits (183), Expect = 6e-14
 Identities = 84/327 (25%), Positives = 125/327 (38%), Gaps = 59/327 (18%)

Query: 173 VRELVTRGADVNAEDNDNWSPLTYAAR---EGYTDVCAELLDHGADLEHRDMGGWSPLMW 229
           VR L+  GADVN       +PL        E   D+   LL+ GAD+   +  G++PL  
Sbjct: 30  VRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHL 89

Query: 230 ASYKGHT-DTVALLLDKNADVNAHGNYHISSL-IWAAG-RGYTEIVALLVKKGAKVNVGD 286
             Y   T D + LL+   ADVNA      + L ++ +G     +++ LL++KGA VN  D
Sbjct: 90  YLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALD 149

Query: 287 KVYGTTPLVWAC----RKGHVEIVDILLKAGA---NVDVAGLWA--YMPLYSSALADIFS 337
             YG TPL  A     R  +VE++ +L+ AGA    VD        +        A I  
Sbjct: 150 L-YGMTPL--AVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVR 206

Query: 338 EPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGT 397
           E                                  R G DP  T       L    +  +
Sbjct: 207 E--------------------------------LIRAGCDPAATDMLGNTPLHSMATGSS 234

Query: 398 TPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNA 457
                 C++     V  LL AG +++    Y  TPL  A + N       L+    ++NA
Sbjct: 235 ------CKRSL---VLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINA 285

Query: 458 LDKDGCTALTIACKDGYYEIAVLLLNS 484
           +  DG T L++  ++         L  
Sbjct: 286 VSSDGNTPLSLMVRNNNGRAVRAALAK 312

Length = 471

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 66.5 bits (163), Expect = 1e-13
 Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 2/82 (2%)

Query: 535 AVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRG 594
           A + GN+ ++KLLL    D+ +   D  T L  A +  NLE +++L++  A + A DK G
Sbjct: 4   AAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKDKDG 61

Query: 595 DTVLHIAMRARSKTIVEVFIRN 616
           +T LH+A R  +  IV++ + +
Sbjct: 62  NTALHLAARNGNLEIVKLLLEH 83

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 68.3 bits (166), Expect = 7e-13
 Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 8/109 (7%)

Query: 151 DDRDDNGGTALMFAAQKGKLSF-----VRELVTRGA---DVNAEDNDNWSPLTYAAREGY 202
           + +D +G T L  AA  G          + L+  GA     N  D D  +PL +AA  G 
Sbjct: 100 NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGD 159

Query: 203 TDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNA 251
            D+   LL+ GAD   R+  G + L  A+  G  + V LLLDK   ++ 
Sbjct: 160 ADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKGLHLSL 208

Length = 235

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 70.4 bits (172), Expect = 8e-13
 Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 24/260 (9%)

Query: 76  SLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLP---------RSDSMVSLCY-- 124
           S+ E  T +  A+  G+  I++L +    D+      +P          +  ++ L    
Sbjct: 31  SVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDN 90

Query: 125 --RTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGAD 182
              T    I     D ++T L+    V + +D    T L +A +KG L  ++ L   GAD
Sbjct: 91  GVDTSILPIPCIEKDMIKTILDCGIDV-NIKDAELKTFLHYAIKKGDLESIKMLFEYGAD 149

Query: 183 VNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALL 242
           VN ED++   P+  A +  + D+   LL+ GA    +D  G SPL  A+  G    + LL
Sbjct: 150 VNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLL 209

Query: 243 LDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWA----C 298
           +D    +        + L  A    +      L+   A +N  D + G+TPL  A    C
Sbjct: 210 IDHGNHIMNKCKNGFTPLHNAI--IHNRSAIELLINNASINDQD-IDGSTPLHHAINPPC 266

Query: 299 RKGHVEIVDILLKAGANVDV 318
                +I+DILL   A++ +
Sbjct: 267 DI---DIIDILLYHKADISI 283

Length = 434

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 67.9 bits (165), Expect = 9e-13
 Identities = 52/162 (32%), Positives = 69/162 (42%), Gaps = 13/162 (8%)

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGN-----FTEVVELL 448
             G  PL  A  KG  +IV +LL +GA+V+       TPL +A L         EV +LL
Sbjct: 71  LDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLL 130

Query: 449 LEYKP---NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKG 505
           LE        N  D+DG T L  A  +G  +I  LLL +GA  N ++  G + L  A K 
Sbjct: 131 LEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKN 190

Query: 506 GHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLL 547
           G   +V+ LL K                  V   NV    +L
Sbjct: 191 GRIELVKLLLDK-----GLHLSLLKFNLEGVANANVSKRNIL 227

Length = 235

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 70.3 bits (172), Expect = 1e-12
 Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 5/168 (2%)

Query: 442 TEVVELLLEYKPNVNALDKD-GCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLI 500
            E+ +LLL Y  ++N  D+  G TAL  A ++    +  LLL+ GA +NI D++ +S L 
Sbjct: 147 AEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLH 206

Query: 501 HAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEK-GNVPILKLLLTANPDLEI-AT 558
           HAVK  ++ IV  LL+     D   K   T ++ +V    +  ILKLLL    D+   + 
Sbjct: 207 HAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSY 266

Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARS 606
             G T L  ++K+     +++L++  A I +++    T L  A++   
Sbjct: 267 ILGLTALHSSIKSE--RKLKLLLEYGADINSLNSYKLTPLSSAVKQYL 312

Length = 477

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 67.2 bits (163), Expect = 2e-12
 Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 31/172 (18%)

Query: 447 LLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGG 506
           L L    ++ A D DG   L  A   G  +I  LLL SGA +N +D  GD+ L  A   G
Sbjct: 58  LKLIVDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNG 117

Query: 507 HRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT---KDGDT 563
           +                              +GN+ + KLLL A  DL++     +DG+T
Sbjct: 118 NP----------------------------PEGNIEVAKLLLEAGADLDVNNLRDEDGNT 149

Query: 564 PLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIR 615
           PL  A    + + +++L++  A   + +  G T L  A +     +V++ + 
Sbjct: 150 PLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLD 201

Length = 235

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 68.9 bits (168), Expect = 2e-12
 Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 24/228 (10%)

Query: 81  KTAVYTAVEKGNVPILKLLLTA--NPDLEIATKTLP-------RSDSMVSLC--YRTLQS 129
           + A+  A+  G + I + LL    NP+ EI     P       R    + L   +  +  
Sbjct: 3   QVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPD 62

Query: 130 Y------------IAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELV 177
                        + E ++ +++  L+  +   D    +G T L  A    KL  ++ L+
Sbjct: 63  VKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLI 122

Query: 178 TRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTD 237
            RGAD +  + D +SPL  A   G       L+DH A L+  D  G +PL+ A  KG   
Sbjct: 123 ARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIA 182

Query: 238 TVALLLDKNADVNAHG-NYHISSLIWAAGRGYTEIVALLVKKGAKVNV 284
              +LLD  A+++  G N  +++L +A      +IV L +K+GA  N+
Sbjct: 183 ICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNI 230

Length = 413

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 68.1 bits (166), Expect = 4e-12
 Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 1/129 (0%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL  A     ++I+ +L+  GA+ D+     ++PL +A +    + +ELL+++K  +
Sbjct: 102 GMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACL 161

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLI-HAVKGGHRGIVEAL 514
           +  D  GCT L IA   G   I  +LL+SGA I+   ++G    + +A++     IV   
Sbjct: 162 DIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLF 221

Query: 515 LKKYVDVDI 523
           +K+  D +I
Sbjct: 222 IKRGADCNI 230

Length = 413

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 67.7 bits (166), Expect = 7e-12
 Identities = 66/235 (28%), Positives = 101/235 (42%), Gaps = 12/235 (5%)

Query: 394 SYGTTPL-VWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNF---TEVVELLL 449
             G TPL ++      ++++ +L+KAGA+V+       TPL V  L  F    +V+ LLL
Sbjct: 81  RCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVY-LSGFNINPKVIRLLL 139

Query: 450 EYKPNVNALDKDGCTALTIACKDGYYEIAVL--LLNSGAYINIQDRSGDSNL-IHAVKGG 506
               +VNALD  G T L +  K     + +L  L+++GA +   D    S L  H     
Sbjct: 140 RKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFK 199

Query: 507 HR-GIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKL--LLTANPDLEIATKDGDT 563
            R  IV  L++   D         T +++     +     +  LL A   +    + G T
Sbjct: 200 PRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQT 259

Query: 564 PLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIR-NP 617
           PL  A    N  A + LI   A I AV   G+T L + +R  +   V   +  NP
Sbjct: 260 PLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNP 314

Length = 471

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 67.4 bits (165), Expect = 8e-12
 Identities = 64/267 (23%), Positives = 105/267 (39%), Gaps = 38/267 (14%)

Query: 169 KLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLM 228
           K+  ++ ++      +        PL  A      DV   LLD+GAD+        +PL 
Sbjct: 14  KVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLH 73

Query: 229 WASYKGHT-----DTVALLLDKNADVNAHGNYHISSLIWAAGR--GYTEIVALLVKKGAK 281
           + S   +      + V LLL+  A+VNA  N  I+ L++A  +      IV  L+  GA 
Sbjct: 74  YLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGAN 133

Query: 282 VNVGDKVYGTTPLVWACRKGHV--EIVDILLKAGANVDVAGLWAYMPLYSSAL--ADIFS 337
           VN+     G   L        +  +I+ +L+  G +++      Y+  Y   +   D++ 
Sbjct: 134 VNI-KNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRVNYLLSYGVPINIKDVYG 192

Query: 338 EPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGT 397
                TPL    YA + +   F+        K+    G +P          LV    YG 
Sbjct: 193 F----TPL---HYAVYNNNPEFV--------KYLLDLGANPN---------LVN--KYGD 226

Query: 398 TPLVWACRKGHVEIVDILLKAGANVDV 424
           TPL  A    + EI  +LL  G ++  
Sbjct: 227 TPLHIAILNNNKEIFKLLLNNGPSIKT 253

Length = 422

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 67.4 bits (165), Expect = 8e-12
 Identities = 61/255 (23%), Positives = 96/255 (37%), Gaps = 27/255 (10%)

Query: 245 KNADVNAHGNYHISSLIWAAGRG-YTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHV 303
              D+N +        ++ A      ++V +L+  GA +N   K   +TPL +     + 
Sbjct: 23  MEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNN-STPLHYLSNIKYN 81

Query: 304 -----EIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKS 358
                EIV +LL+ GANV+        PL               +   V      G+   
Sbjct: 82  LTDVKEIVKLLLEYGANVNAPDNNGITPLL------YAISKKSNSYSIVEYLLDNGA-NV 134

Query: 359 FLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKA 418
            +     E + H   +          LL      +  G    + A  +     V+ LL  
Sbjct: 135 NIKNSDGENLLHLYLESNKIDLKILKLL------IDKGVD--INAKNR-----VNYLLSY 181

Query: 419 GANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIA 478
           G  +++  +Y +TPL  A   N  E V+ LL+   N N ++K G T L IA  +   EI 
Sbjct: 182 GVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIF 241

Query: 479 VLLLNSGAYINIQDR 493
            LLLN+G  I     
Sbjct: 242 KLLLNNGPSIKTIIE 256

Length = 422

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 67.6 bits (165), Expect = 9e-12
 Identities = 77/340 (22%), Positives = 137/340 (40%), Gaps = 37/340 (10%)

Query: 4   DDVSSKRDRSGDSNLI------HAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTD 57
           + +    + S  ++LI       AV+  +  +V++LL +  +V+ P   R L+    +  
Sbjct: 21  EYIDHTENYSTSASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDH-RDLTPLHIICK 79

Query: 58  ANDQRSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLE-----IATKT 112
             ++      +   NK         A+  A    NV I K++LT           +    
Sbjct: 80  EPNKLGMKEMIRSINKCSVFYTLV-AIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDK 138

Query: 113 LPRSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSF 172
             + D + +   + L SY A+ N+                    G TAL +A +      
Sbjct: 139 KSKDDIIEAEITKLLLSYGADINMKD---------------RHKGNTALHYATENKDQRL 183

Query: 173 VRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWA-S 231
              L++ GA+VN  D  N SPL +A +     +   LL++GA  + RD  G +PL  +  
Sbjct: 184 TELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVG 243

Query: 232 YKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGT 291
           Y    D + LLL+   DVNA       + + ++ +     + LL++ GA +N  +  Y  
Sbjct: 244 YCKDYDILKLLLEHGVDVNAKSYILGLTALHSSIKS-ERKLKLLLEYGADINSLN-SYKL 301

Query: 292 TPLVWACRK------GHVEIVDILLKAGANVDVAGLWAYM 325
           TPL  A ++      G + I +I L      D+     ++
Sbjct: 302 TPLSSAVKQYLCINIGRILISNICLLKRIKPDIKNSEGFI 341

Length = 477

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 64.8 bits (157), Expect = 1e-11
 Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 8/179 (4%)

Query: 413 DILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKD 472
            + L    ++    L    PL  A      ++V+LLL    +VNA D DG T L +A  +
Sbjct: 57  LLKLIVDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALN 116

Query: 473 G-----YYEIAVLLLNSGAY---INIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIP 524
           G       E+A LLL +GA     N++D  G++ L  A   G   IVE LL+   D +  
Sbjct: 117 GNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSR 176

Query: 525 GKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDK 583
                TA+  A + G + ++KLLL     L +   + +      V  RN+  +  LI  
Sbjct: 177 NSYGVTALDPAAKNGRIELVKLLLDKGLHLSLLKFNLEGVANANVSKRNILNLTSLIIA 235

Length = 235

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 64.5 bits (156), Expect = 1e-11
 Identities = 53/187 (28%), Positives = 73/187 (39%), Gaps = 14/187 (7%)

Query: 160 ALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGAD---- 215
             + A       F+  L+     + + D  N S            + A  L         
Sbjct: 3   PSLSALLLINKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIV 62

Query: 216 ---LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAA-----GRG 267
              L  RD+ G  PL  A+ KG    V LLL   ADVNA      + L  AA       G
Sbjct: 63  DRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEG 122

Query: 268 YTEIVALLVKKGA--KVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYM 325
             E+  LL++ GA   VN      G TPL WA   G  +IV++LL+AGA+ +    +   
Sbjct: 123 NIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVT 182

Query: 326 PLYSSAL 332
            L  +A 
Sbjct: 183 ALDPAAK 189

Length = 235

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 67.6 bits (165), Expect = 1e-11
 Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 16/206 (7%)

Query: 133 EDNLDSLQTFLENKRTVAD-------------DRDDNGGTALMFAAQKGKLSFVRELVTR 179
           EDN+  L+ FL++ + + D               D N  + L+  A  G  + + EL+  
Sbjct: 488 EDNVVILKNFLQHHKELHDLNVGDLLGDNGGEHDDPNMASNLLTVASTGNAALLEELLKA 547

Query: 180 GADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTV 239
             D +  D+   +PL  AA +GY D    LL H  ++  RD  G + L  A    H    
Sbjct: 548 KLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIF 607

Query: 240 ALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACR 299
            +L    +  + H    +  L  AA R     +  L+K+G  V+  D   G T L  A  
Sbjct: 608 RILYHFASISDPHAAGDL--LCTAAKRNDLTAMKELLKQGLNVDSEDH-QGATALQVAMA 664

Query: 300 KGHVEIVDILLKAGANVDVAGLWAYM 325
           + HV++V +L+  GA+VD A      
Sbjct: 665 EDHVDMVRLLIMNGADVDKANTDDDF 690

Length = 823

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 65.8 bits (160), Expect = 2e-11
 Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 3/186 (1%)

Query: 436 ATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSG 495
           A L    ++   LL+   N N    DG + + +A K    E   LL+  GA  +++    
Sbjct: 9   AILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDI 68

Query: 496 DSNLIHAVKGGHRGIVEALL--KKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPD 553
           +S L  AV+ G    VE LL   K+ D D+  K+  T ++ A     + I+KLL+    D
Sbjct: 69  ESELHDAVEEGDVKAVEELLDLGKFAD-DVFYKDGMTPLHLATILKKLDIMKLLIARGAD 127

Query: 554 LEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVF 613
            +I   D  +PL  AV   +++ I++LID KA +   D  G T L IAM      I ++ 
Sbjct: 128 PDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKML 187

Query: 614 IRNPKN 619
           + +  N
Sbjct: 188 LDSGAN 193

Length = 413

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 65.0 bits (159), Expect = 5e-11
 Identities = 78/340 (22%), Positives = 128/340 (37%), Gaps = 63/340 (18%)

Query: 270 EIVALLVKKGAKVNVGDKVYGTTPLVWACRKGH---VEIVDILLKAGANVDVAGLWAYMP 326
           E V  L+  GA VN     YG TPL            +IV +LL+AGA+V+      + P
Sbjct: 28  EEVRRLLAAGADVNF-RGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTP 86

Query: 327 LYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLL 386
           L+                 T+ +                  +K   + G D         
Sbjct: 87  LHLYLYNAT----------TLDV------------------IKLLIKAGAD--------- 109

Query: 387 FVLVMHLSYGTTPLVWACRKG---HVEIVDILLKAGANVDVAGLYCWTPLLV------AT 437
            V       G TPL      G   + +++ +LL+ GA+V+   LY  TPL V      A 
Sbjct: 110 -VNAKDK-VGRTPL-HVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNAN 166

Query: 438 LGNFTEVVELLLEYKPNVNALDKDGCTALTI---ACKDGYYEIAVLLLNSGAYINIQDRS 494
           +    E++ LL++   +V A+D    + L     + K     I   L+ +G      D  
Sbjct: 167 V----ELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKP-RARIVRELIRAGCDPAATDML 221

Query: 495 GDSNLIHAVKGG--HRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP 552
           G++ L     G    R +V  LL   + ++   +  +T ++ A    N    + L+    
Sbjct: 222 GNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGA 281

Query: 553 DLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDK 592
           D+   + DG+TPL   V+  N  A++  + K      V  
Sbjct: 282 DINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAETVAA 321

Length = 471

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 64.9 bits (158), Expect = 9e-11
 Identities = 49/190 (25%), Positives = 92/190 (48%), Gaps = 5/190 (2%)

Query: 407 GHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTAL 466
           G+  +++ LLKA  + D+      TPL +A    + + V +LL++  NV+  D +G TAL
Sbjct: 536 GNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTAL 595

Query: 467 TIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGK 526
             A    +++I  +L +  +  +    +GD  L  A K      ++ LLK+ ++VD    
Sbjct: 596 WNAISAKHHKIFRILYHFASISDPH-AAGDL-LCTAAKRNDLTAMKELLKQGLNVDSEDH 653

Query: 527 ERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGD---TPLLKAVKTRNLEAIQMLIDK 583
           +  TA+  A+ + +V +++LL+    D++ A  D D   T L + ++ R L     ++D 
Sbjct: 654 QGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELRELLQKRELGHSITIVDS 713

Query: 584 KAKITAVDKR 593
                    R
Sbjct: 714 VPADEPDLGR 723

Length = 823

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 63.1 bits (153), Expect = 2e-10
 Identities = 81/364 (22%), Positives = 143/364 (39%), Gaps = 67/364 (18%)

Query: 168 GKLSFVRELV-TRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSP 226
           G +  + +++  +G  +N   ++  +PL  A R G   +    + HGAD+ H +     P
Sbjct: 12  GDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHP 71

Query: 227 LMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGD 286
           L+ A   G  D + LL+D   D +      I            +++  ++  G  VN+ D
Sbjct: 72  LLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEK----------DMIKTILDCGIDVNIKD 121

Query: 287 KVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLT 346
               T  L +A +KG +E + +L + GA+V++       P++ +   + F    L   L 
Sbjct: 122 AELKTF-LHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLL--LE 178

Query: 347 VGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRK 406
            G YA                                       +  + G +PL  A   
Sbjct: 179 KGAYAN--------------------------------------VKDNNGESPLHNAAEY 200

Query: 407 GHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCT-- 464
           G    + +L+  G ++       +TPL  A + N    +ELL+    ++N  D DG T  
Sbjct: 201 GDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHN-RSAIELLINNA-SINDQDIDGSTPL 258

Query: 465 --ALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRG------IVEALLK 516
             A+   C     +I  +LL   A I+I+D  G++ +  A K  ++       I  A+L 
Sbjct: 259 HHAINPPCD---IDIIDILLYHKADISIKDNKGENPIDTAFKYINKDPVIKDIIANAVLI 315

Query: 517 KYVD 520
           K  D
Sbjct: 316 KEAD 319

Length = 434

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 63.1 bits (153), Expect = 2e-10
 Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 30/232 (12%)

Query: 127 LQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAE 186
           L+  I   ++++++  ++NK    +   D   T L+ A + G    V   +  GAD+N  
Sbjct: 5   LRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHI 64

Query: 187 DNDNWSPLTYAAREGYTDVCAELLDHGAD-----------------------LEHRDMGG 223
           +     PL  A + G  D+   L+D+G D                       +  +D   
Sbjct: 65  NTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAEL 124

Query: 224 WSPLMWASYKGHTDTVALLLDKNADVNA---HGNYHISSLIWAAGRGYTEIVALLVKKGA 280
            + L +A  KG  +++ +L +  ADVN    +G Y I     A    + +I+ LL++KGA
Sbjct: 125 KTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHI---AIKHNFFDIIKLLLEKGA 181

Query: 281 KVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSAL 332
             NV D   G +PL  A   G    + +L+  G ++       + PL+++ +
Sbjct: 182 YANVKDN-NGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAII 232

Length = 434

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 62.4 bits (152), Expect = 3e-10
 Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 36/213 (16%)

Query: 458 LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIH------AVKGGHRGIV 511
             K     L +A +    ++  +LL++GA IN      +S  +H            + IV
Sbjct: 31  SYKKPVLPLYLAKEARNIDVVKILLDNGADINSST-KNNSTPLHYLSNIKYNLTDVKEIV 89

Query: 512 EALLKKYVDVDIPGKERKTAVYTAVEK--GNVPILKLLLTANPDLEIATKDGDTPLLKAV 569
           + LL+   +V+ P     T +  A+ K   +  I++ LL    ++ I   DG+  L   +
Sbjct: 90  KLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYL 149

Query: 570 K--TRNLEAIQMLIDKKAKITA----------------VDKRGDTVLHIAMRARSKTIVE 611
           +    +L+ +++LIDK   I A                 D  G T LH A+   +   V+
Sbjct: 150 ESNKIDLKILKLLIDKGVDINAKNRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVK 209

Query: 612 VFIR---NPKNNILLYRPNKAGETPYSIDMNNQ 641
             +    NP  N++    NK G+TP  I + N 
Sbjct: 210 YLLDLGANP--NLV----NKYGDTPLHIAILNN 236

Length = 422

>gnl|CDD|219519 pfam07693, KAP_NTPase, KAP family P-loop domain

 Score = 60.9 bits (148), Expect = 5e-10
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 4/62 (6%)

Query: 327 LYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTF-TFSSL 385
            Y+  LA +  EP LA    +GLY  WGSGK+  L  L++E+K F     +     F   
Sbjct: 3   KYAENLAKLLVEPSLAPGFVIGLYGAWGSGKTSFLNLLEDELKEFP---EEFHIVYFDPW 59

Query: 386 LF 387
           LF
Sbjct: 60  LF 61

The KAP (after Kidins220/ARMS and PifA) family of predicted NTPases are sporadically distributed across a wide phylogenetic range in bacteria and in animals. Many of the prokaryotic KAP NTPases are encoded in plasmids and tend to undergo disruption to form pseudogenes. A unique feature of all eukaryotic and certain bacterial KAP NTPases is the presence of two or four transmembrane helices inserted into the P-loop NTPase domain. These transmembrane helices anchor KAP NTPases in the membrane such that the P-loop domain is located on the intracellular side. Length = 301

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 59.1 bits (142), Expect = 1e-09
 Identities = 46/192 (23%), Positives = 72/192 (37%), Gaps = 14/192 (7%)

Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNL-IHAVKGGHRGIVEALLKKYVDVDIP--G 525
             K     + V LL   +           NL +         + E LLK  VD  +    
Sbjct: 11  INKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHLAARD 70

Query: 526 KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAV-----KTRNLEAIQML 580
            + +  +++A  KG+  I+KLLL +  D+     DGDTPL  A         N+E  ++L
Sbjct: 71  LDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLL 130

Query: 581 IDKKAK---ITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSID 637
           ++  A        D+ G+T LH A       IVE+ +    +       N  G T     
Sbjct: 131 LEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGAD---PNSRNSYGVTALDPA 187

Query: 638 MNNQKSILAQEC 649
             N +  L +  
Sbjct: 188 AKNGRIELVKLL 199

Length = 235

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 61.2 bits (148), Expect = 1e-09
 Identities = 53/223 (23%), Positives = 108/223 (48%), Gaps = 7/223 (3%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           Y  TP+ +A  +G+ ++V++LL  GA+V++  L   + L  A      + ++ +++ + N
Sbjct: 177 YCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSN 236

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRG-IVEA 513
           +N  D     +L  A ++   E ++LL ++G  +N  D   ++ L HA +      +V  
Sbjct: 237 INKND----LSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPK 292

Query: 514 LLKKYVDVDIPGKERKTAVYTAVEKG-NVPILKLLLTANPDLEIATKDGDTPLLKAVK-T 571
           LL++  DV+    + +T +Y   + G +   ++ L+    D+  A +   TPL +A    
Sbjct: 293 LLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLD 352

Query: 572 RNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI 614
           RN + +  L++  A + A D    T +H A    +  I+   +
Sbjct: 353 RNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLL 395

Length = 682

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 60.0 bits (145), Expect = 2e-09
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 6/168 (3%)

Query: 156 NGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGA- 214
           +G + +  A +      ++ L+  GA  + +  D  S L  A  EG      ELLD G  
Sbjct: 34  DGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKF 93

Query: 215 --DLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIV 272
             D+ ++D  G +PL  A+     D + LL+ + AD +       S L  A   G  + +
Sbjct: 94  ADDVFYKD--GMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGI 151

Query: 273 ALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAG 320
            LL+   A +++ D   G TPL+ A  KG + I  +LL +GAN+D  G
Sbjct: 152 ELLIDHKACLDIED-CCGCTPLIIAMAKGDIAICKMLLDSGANIDYFG 198

Length = 413

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 59.3 bits (144), Expect = 3e-09
 Identities = 79/338 (23%), Positives = 129/338 (38%), Gaps = 67/338 (19%)

Query: 237 DTVALLLDKNADVNAHGNYH---ISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTP 293
           + V  LL   ADVN  G Y    +   +  +     +IV LL++ GA VN  ++  G TP
Sbjct: 28  EEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPER-CGFTP 86

Query: 294 L-VWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAK 352
           L ++      ++++ +L+KAGA+V+                         TPL V L   
Sbjct: 87  LHLYLYNATTLDVIKLLIKAGADVNAKDKVGR------------------TPLHVYL--- 125

Query: 353 WGSGKS-------FLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWAC- 404
             SG +        LL           R+G D                 YG TPL  A  
Sbjct: 126 --SGFNINPKVIRLLL-----------RKGADVNALD-----------LYGMTPL--AVL 159

Query: 405 ---RKGHVEIVDILLKAGANVDVAGLYCWTPL--LVATLGNFTEVVELLLEYKPNVNALD 459
              R  +VE++ +L+ AGA+V        + L   + +      +V  L+    +  A D
Sbjct: 160 LKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATD 219

Query: 460 KDGCTALTIACKDGYYEIAVL--LLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKK 517
             G T L         + +++  LL +G  IN ++R G + L +A    +      L+  
Sbjct: 220 MLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIAL 279

Query: 518 YVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLE 555
             D++    +  T +   V   N   ++  L  NP  E
Sbjct: 280 GADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAE 317

Length = 471

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 58.7 bits (142), Expect = 4e-09
 Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 5/166 (3%)

Query: 410 EIVDILLKAGANVDVAGLYCW-TPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTI 468
           EI  +LL  GA++++   +   T L  AT      + ELLL Y  NVN  DK   + L  
Sbjct: 148 EITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHH 207

Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAV-KGGHRGIVEALLKKYVDVDIPGKE 527
           A K     I  +LL +GA  + +D+ G++ L  +V       I++ LL+  VDV+     
Sbjct: 208 AVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYI 267

Query: 528 RK-TAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTR 572
              TA++++++      LKLLL    D+        TPL  AVK  
Sbjct: 268 LGLTALHSSIKSERK--LKLLLEYGADINSLNSYKLTPLSSAVKQY 311

Length = 477

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 52.2 bits (126), Expect = 5e-09
 Identities = 16/54 (29%), Positives = 26/54 (48%)

Query: 190 NWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLL 243
             + L  AA  G  ++   LL+ G D+   D  G + L  A+  G+ + + LLL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 58.1 bits (140), Expect = 7e-09
 Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 22/208 (10%)

Query: 443 EVVELLLEYKPN-VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIH 501
           E +E +++ K N +N    +  T L  A + G  +I  L +  GA IN  +      L+ 
Sbjct: 15  EAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLT 74

Query: 502 AVKGGHRGIVEALLKKYVDVDI---PGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           A+K G   I++ L+   VD  I   P  E+               +K +L    D+ I  
Sbjct: 75  AIKIGAHDIIKLLIDNGVDTSILPIPCIEKDM-------------IKTILDCGIDVNIKD 121

Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK 618
            +  T L  A+K  +LE+I+ML +  A +   D  G   +HIA++     I+++ +   +
Sbjct: 122 AELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLL---E 178

Query: 619 NNILLYRPNKAGETP--YSIDMNNQKSI 644
                   +  GE+P   + +  +   I
Sbjct: 179 KGAYANVKDNNGESPLHNAAEYGDYACI 206

Length = 434

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 58.1 bits (141), Expect = 7e-09
 Identities = 63/265 (23%), Positives = 100/265 (37%), Gaps = 25/265 (9%)

Query: 66  RNLLDKNKHKSLKER--KTAVYTAVEKGNV-PILKLLLTANPDLEIATKTLPRSDSMVSL 122
           R LL+     +  ER   T ++  +       ++KLL+ A  D+                
Sbjct: 67  RLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVN-----------AKDK 115

Query: 123 CYRT-LQSYIAEDNLD-SLQTFLENKRTVADDRDDNGGTALMFAAQKGK---LSFVRELV 177
             RT L  Y++  N++  +   L  K    +  D  G T L     K +   +  +R L+
Sbjct: 116 VGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPL-AVLLKSRNANVELLRLLI 174

Query: 178 TRGADVNAEDNDNWSPLTYAAR--EGYTDVCAELLDHGADLEHRDMGGWSPL-MWASYKG 234
             GADV A D+   S L +  +  +    +  EL+  G D    DM G +PL   A+   
Sbjct: 175 DAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSS 234

Query: 235 HTDTVAL-LLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTP 293
              ++ L LL     +NA   Y  + L +AA          L+  GA +N      G TP
Sbjct: 235 CKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSD-GNTP 293

Query: 294 LVWACRKGHVEIVDILLKAGANVDV 318
           L    R  +   V   L    + + 
Sbjct: 294 LSLMVRNNNGRAVRAALAKNPSAET 318

Length = 471

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 58.4 bits (141), Expect = 7e-09
 Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 32/191 (16%)

Query: 443 EVVELLLEYKPNVNALDKDGCTALTIACKD------------------GYYEIAV--LLL 482
           +VV+ LL    NVN  D    T L I CK+                   Y  +A+     
Sbjct: 51  DVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFN 110

Query: 483 NSGAYI------NIQDRSGDSNLIHAVKGGHRGIVEA-----LLKKYVDVDIPGKER-KT 530
           N    I      N        +L++  K     I+EA     LL    D+++  + +  T
Sbjct: 111 NRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNT 170

Query: 531 AVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAV 590
           A++ A E  +  + +LLL+   ++ I  K  ++PL  AVK  N   + +L++  A   A 
Sbjct: 171 ALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDAR 230

Query: 591 DKRGDTVLHIA 601
           DK G+T LHI+
Sbjct: 231 DKCGNTPLHIS 241

Length = 477

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 58.0 bits (140), Expect = 8e-09
 Identities = 66/328 (20%), Positives = 121/328 (36%), Gaps = 59/328 (17%)

Query: 164 AAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMG- 222
           A +   L  V+ L+TRG +VN  D+ + +PL    +E       E++     +    +  
Sbjct: 44  AVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMI---RSINKCSVFY 100

Query: 223 GWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGY-----TEIVALLVK 277
               +  A    + +   ++L      N + N     L++   +        EI  LL+ 
Sbjct: 101 TLVAIKDAFNNRNVEIFKIIL-----TNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLS 155

Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFS 337
            GA +N+ D+  G T L +A       + ++LL  GANV++       PL+         
Sbjct: 156 YGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLH--------- 206

Query: 338 EPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGT 397
                                         +KH+ +  V       +           G 
Sbjct: 207 ----------------------------HAVKHYNKPIVHILLENGASTDARD---KCGN 235

Query: 398 TPLVWAC-RKGHVEIVDILLKAGANVDV-AGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           TPL  +       +I+ +LL+ G +V+  + +   T L  +        ++LLLEY  ++
Sbjct: 236 TPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSSI--KSERKLKLLLEYGADI 293

Query: 456 NALDKDGCTALTIACKDGY-YEIAVLLL 482
           N+L+    T L+ A K      I  +L+
Sbjct: 294 NSLNSYKLTPLSSAVKQYLCINIGRILI 321

Length = 477

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 51.5 bits (124), Expect = 1e-08
 Identities = 18/54 (33%), Positives = 27/54 (50%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLL 449
           G T L  A   G +E+V  LL+ G +++       T L +A      EV++LLL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 17/54 (31%), Positives = 27/54 (50%)

Query: 223 GWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLV 276
           G + L  A+  G  + V  LL+K  D+N       ++L  AA  G  E++ LL+
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 49.9 bits (120), Expect = 7e-08
 Identities = 38/170 (22%), Positives = 57/170 (33%), Gaps = 79/170 (46%)

Query: 18  LIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSL 77
           L  A K G+  +V+ LL+K  DV+                                   L
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVN-----------------------------------L 25

Query: 78  KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLD 137
            +  TA++ A   GN+ I+KLLL    D+                               
Sbjct: 26  GDTDTALHLAARNGNLEIVKLLLEHGADV------------------------------- 54

Query: 138 SLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAED 187
                        + +D +G TAL  AA+ G L  V+ L+  GAD+N +D
Sbjct: 55  -------------NAKDKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 55.5 bits (133), Expect = 7e-08
 Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 5/222 (2%)

Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLG-NFTEVVELLLEYKPNVNAL 458
           L+ A R   +E   +L  AG +V+       TPL  A+   + + +V  LLE   +VNA 
Sbjct: 244 LLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAK 303

Query: 459 DKDGCTALTIACKDGY-YEIAVLLLNSGAYINIQDRSGDSNLIHAVK-GGHRGIVEALLK 516
           +  G T L +  K+GY  E    L+  GA +N  DR   + L  A     ++ IV  LL+
Sbjct: 304 NIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLE 363

Query: 517 KYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAV-KTRNLE 575
              +V+      KT ++ A  + NV I+  LL    D+E  ++   T L  A+  T    
Sbjct: 364 LGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYM 423

Query: 576 AIQMLIDKKAKITAVDKRGDTVLHIAMRARSK-TIVEVFIRN 616
           +++ LID+ A + + +K   T LH A +   K  ++E+ + N
Sbjct: 424 SVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDN 465

Length = 682

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 54.6 bits (131), Expect = 9e-08
 Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 1/156 (0%)

Query: 164 AAQKGKLSFVRELVTRGADVN-AEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMG 222
           A ++G +  V EL+  G   +     D  +PL  A      D+   L+  GAD +  +  
Sbjct: 75  AVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTD 134

Query: 223 GWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKV 282
            +SPL  A   G    + LL+D  A ++       + LI A  +G   I  +L+  GA +
Sbjct: 135 KFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANI 194

Query: 283 NVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDV 318
           +   K      L +A     ++IV + +K GA+ ++
Sbjct: 195 DYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNI 230

Length = 413

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 46/133 (34%)

Query: 294 LVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKW 353
           L  A + G++E+V +LL+ GA+V++                        T   + L A+ 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNL----------------------GDTDTALHLAARN 38

Query: 354 GSGK--SFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEI 411
           G+ +    LL             G D                  G T L  A R G++EI
Sbjct: 39  GNLEIVKLLLEH-----------GADVNAK-----------DKDGNTALHLAARNGNLEI 76

Query: 412 VDILLKAGANVDV 424
           V +LL+ GA++++
Sbjct: 77  VKLLLEHGADINL 89

Length = 91

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 48.5 bits (116), Expect = 1e-07
 Identities = 20/55 (36%), Positives = 28/55 (50%)

Query: 143 LENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYA 197
           LE+     +  D NG T L  AA+ G L  V+ L+  G D+N  D+D  + L  A
Sbjct: 2   LEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 53.1 bits (128), Expect = 2e-07
 Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 23/151 (15%)

Query: 83  AVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTF 142
               + +  +  I++ LL    ++ I       SD    L      + I   +L  L+  
Sbjct: 111 LYAISKKSNSYSIVEYLLDNGANVNIKN-----SDGENLLHLYLESNKI---DLKILKLL 162

Query: 143 LENKRTV---------------ADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAED 187
           ++    +                + +D  G T L +A       FV+ L+  GA+ N  +
Sbjct: 163 IDKGVDINAKNRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVN 222

Query: 188 NDNWSPLTYAAREGYTDVCAELLDHGADLEH 218
               +PL  A      ++   LL++G  ++ 
Sbjct: 223 KYGDTPLHIAILNNNKEIFKLLLNNGPSIKT 253

Length = 422

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 53.9 bits (129), Expect = 2e-07
 Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 5/146 (3%)

Query: 173 VRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASY 232
           V  L+  GA+VNA D  + +P+ YAA      +   LLD+GAD+E       + L +A  
Sbjct: 358 VITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALC 417

Query: 233 KGHTDT-VALLLDKNADVNAHGNYHISSLIWAAGRG-YTEIVALLVKKGAKVNVGDKVYG 290
             +    V  L+D+ A+VN+      + L +A  +    +++ +L+  GA VN  + +  
Sbjct: 418 GTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAIN-IQN 476

Query: 291 TTPLVWACRKGHVEIVDILLKAGANV 316
             PL+ A    +  IV+ILL  GA +
Sbjct: 477 QYPLLIAL--EYHGIVNILLHYGAEL 500

Length = 682

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 53.5 bits (128), Expect = 2e-07
 Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 13/159 (8%)

Query: 463 CTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLK--KYVD 520
           C A+      G  +IA  LL+ G   N +   G S +  A+K      ++ L+K     D
Sbjct: 7   CDAILF----GELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPD 62

Query: 521 VDIPGKERKTAVYTAVEKGNVPILKLLLTANPDL-EIATKDGDTPLLKAVKTRNLEAIQM 579
           V  P  E  + ++ AVE+G+V  ++ LL       ++  KDG TPL  A   + L+ +++
Sbjct: 63  VKYPDIE--SELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKL 120

Query: 580 LIDKKA--KITAVDKRGDTVLHIAMRARSKTIVEVFIRN 616
           LI + A   I   DK   + LH+A+       +E+ I +
Sbjct: 121 LIARGADPDIPNTDKF--SPLHLAVMMGDIKGIELLIDH 157

Length = 413

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 52.7 bits (126), Expect = 4e-07
 Identities = 66/276 (23%), Positives = 105/276 (38%), Gaps = 48/276 (17%)

Query: 201 GYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSL 260
           G  D+   LLD G +       G SP+  A     ++ + LL+   A  +       S L
Sbjct: 13  GELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESEL 72

Query: 261 IWAAGRGYTEIVALLVKKGAKVNVGDKVY--GTTPLVWACRKGHVEIVDILLKAGANVDV 318
             A   G  + V  L+  G   +  D  Y  G TPL  A     ++I+ +L+  GA+ D+
Sbjct: 73  HDAVEEGDVKAVEELLDLGKFAD--DVFYKDGMTPLHLATILKKLDIMKLLIARGADPDI 130

Query: 319 AGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDP 378
                          D F      +PL + +      G   L+        H  +  +D 
Sbjct: 131 PN------------TDKF------SPLHLAVMMGDIKGIELLI-------DH--KACLD- 162

Query: 379 TFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLY-CWTPLLVAT 437
                       +    G TPL+ A  KG + I  +LL +GAN+D  G   C   L  A 
Sbjct: 163 ------------IEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAI 210

Query: 438 LGNFTEVVELLLEYKPNVN---ALDKDGCTALTIAC 470
             N  ++V L ++   + N    ++ + CT L + C
Sbjct: 211 ENNKIDIVRLFIKRGADCNIMFMIEGEECTILDMIC 246

Length = 413

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 52.5 bits (126), Expect = 4e-07
 Identities = 66/276 (23%), Positives = 111/276 (40%), Gaps = 65/276 (23%)

Query: 409 VEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTE------VVELLLEYKPNVNALDKDG 462
            +IV + +  GANV+       TPL    L N  +      +V++L+E   ++N  + DG
Sbjct: 51  TDIVKLFINLGANVNGLDNEYSTPL-CTILSNIKDYKHMLDIVKILIENGADINKKNSDG 109

Query: 463 CTALTIACKDGYY---EIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHR---GIVEALLK 516
            T L     +GY    EI + ++ +GA   + D+ G + L   ++  H     I++ LL+
Sbjct: 110 ETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLE 169

Query: 517 KYVDVD-IPGKERKTAVY----TAVEKGNVPILKL------------------------- 546
           K VD++    KE+   ++      +++ +  ILKL                         
Sbjct: 170 KGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNS 229

Query: 547 LLTANPD------------LEIATKD--GDTPLLKAVKTRNLEAIQMLIDKKAKITAVDK 592
           LL  N              ++I   D  G  PL  +V   N +  + L+     I  + +
Sbjct: 230 LLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITE 289

Query: 593 RGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNK 628
            G+T L  A    SK I         N+IL  +PNK
Sbjct: 290 LGNTCLFTAFENESKFIF--------NSILNKKPNK 317

Length = 489

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 46.5 bits (111), Expect = 5e-07
 Identities = 18/52 (34%), Positives = 26/52 (50%)

Query: 464 TALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           TAL  A   G  E+   LL  G  IN  D  G++ L  A + G+  +++ LL
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 51.9 bits (125), Expect = 6e-07
 Identities = 57/250 (22%), Positives = 81/250 (32%), Gaps = 50/250 (20%)

Query: 9   KRDRSGDSNLIHAVKGG---HRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTT 65
            +D+ G    +H    G   +  ++  LL+K  DV                         
Sbjct: 112 AKDKVGR-TPLHVYLSGFNINPKVIRLLLRKGADV------------------------- 145

Query: 66  RNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYR 125
            N LD      L     AV       NV +L+LL+ A  D+             V   +R
Sbjct: 146 -NALDLYGMTPL-----AVLLKSRNANVELLRLLIDAGADV-----------YAVDDRFR 188

Query: 126 TLQSYIAEDNLDSLQTFLENKRTVAD--DRDDNGGTALMFAAQKG--KLSFVRELVTRGA 181
           +L  +  +      +   E  R   D    D  G T L   A     K S V  L+  G 
Sbjct: 189 SLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGI 248

Query: 182 DVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVAL 241
            +NA +    +PL YAA       C  L+  GAD+      G +PL       +   V  
Sbjct: 249 SINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRA 308

Query: 242 LLDKNADVNA 251
            L KN     
Sbjct: 309 ALAKNPSAET 318

Length = 471

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 52.0 bits (124), Expect = 8e-07
 Identities = 26/82 (31%), Positives = 44/82 (53%)

Query: 510 IVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAV 569
           I E LL+   DV+       T ++ A E+GN  ++ LLL+   D+ I   D  + L  AV
Sbjct: 160 IAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAV 219

Query: 570 KTRNLEAIQMLIDKKAKITAVD 591
            ++N++ I+ +ID ++ I   D
Sbjct: 220 DSKNIDTIKAIIDNRSNINKND 241

Length = 682

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 46.1 bits (110), Expect = 8e-07
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 256 HISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILL 310
             ++L  AA  G  E+V  L++KG  +N  D+  G T L  A   G++E++ +LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDE-DGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 46.1 bits (110), Expect = 8e-07
 Identities = 22/54 (40%), Positives = 29/54 (53%)

Query: 157 GGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
           G TAL  AA  G+L  V+ L+ +G D+N  D D  + L  AA  G  +V   LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 45.2 bits (108), Expect = 8e-07
 Identities = 16/30 (53%), Positives = 22/30 (73%)

Query: 289 YGTTPLVWACRKGHVEIVDILLKAGANVDV 318
            G TPL  A R GH+E+V +LL+AGA+V+ 
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 45.2 bits (108), Expect = 8e-07
 Identities = 16/30 (53%), Positives = 22/30 (73%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDV 424
            G TPL  A R GH+E+V +LL+AGA+V+ 
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 44.2 bits (105), Expect = 3e-06
 Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 429 CWTPLLVA-TLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLL 482
             T L  A   G   E+V+ LLE   ++N  D+DG TAL IA ++G  E+  LLL
Sbjct: 1   GRTALHKAAISGRL-ELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 44.2 bits (105), Expect = 3e-06
 Identities = 17/54 (31%), Positives = 30/54 (55%)

Query: 561 GDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI 614
           G T L KA  +  LE ++ L++K   I   D+ G+T LHIA    +  ++++ +
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 49.8 bits (119), Expect = 3e-06
 Identities = 47/213 (22%), Positives = 92/213 (43%), Gaps = 19/213 (8%)

Query: 396 GTTPLVWACRKGHV---EIVDILLKAGANVDVAGLYCWTPLLVATLGNFT---EVVELLL 449
           G TPL      G++   EI+  +++ GA+  +     +T L V    N     E+++LLL
Sbjct: 109 GETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLL 168

Query: 450 EYKPNVNAL-DKDGCTALTIACKDGY----YEIAVLLLNSGAYINIQDRSGDSNLIHAV- 503
           E   ++N   +K+    L    K        +I  L +++G  IN +++S     +  + 
Sbjct: 169 EKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLN 228

Query: 504 ------KGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIA 557
                 K   + I++ +   Y+D++   +     +Y +V   N  I + LL    D+ I 
Sbjct: 229 SLLYDNKRFKKNILDFIFS-YIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINII 287

Query: 558 TKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAV 590
           T+ G+T L  A +  +      +++KK     +
Sbjct: 288 TELGNTCLFTAFENESKFIFNSILNKKPNKNTI 320

Length = 489

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 15/29 (51%), Positives = 19/29 (65%)

Query: 223 GWSPLMWASYKGHTDTVALLLDKNADVNA 251
           G +PL  A+  GH + V LLL+  ADVNA
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVNA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 47.9 bits (113), Expect = 4e-06
 Identities = 55/247 (22%), Positives = 91/247 (36%), Gaps = 40/247 (16%)

Query: 220 DMGGWSPLMWASYKGHTDTVALL-----LDKNADVNAHGNYHISSLIWAAGRGYTEIVAL 274
                S L+  +       +  L     LD +   +   N ++  L        +E+  L
Sbjct: 1   SKPSLSALLLINKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLE-LALLPAASLSEL--L 57

Query: 275 LVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALAD 334
           L     +      + G  PL  A  KG  +IV +LL +GA+V+                 
Sbjct: 58  LKLIVDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVN----------------- 100

Query: 335 IFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLS 394
                G  TPL +      G+     +   K  ++              + L V  +   
Sbjct: 101 AKDADGD-TPLHLAAL--NGNPPEGNIEVAKLLLEA------------GADLDVNNLRDE 145

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            G TPL WA   G  +IV++LL+AGA+ +    Y  T L  A      E+V+LLL+   +
Sbjct: 146 DGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKGLH 205

Query: 455 VNALDKD 461
           ++ L  +
Sbjct: 206 LSLLKFN 212

Length = 235

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 44.2 bits (105), Expect = 4e-06
 Identities = 17/52 (32%), Positives = 30/52 (57%)

Query: 530 TAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLI 581
           TA++ A   G + ++K LL    D+    +DG+T L  A +  NLE +++L+
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional

 Score = 48.9 bits (116), Expect = 5e-06
 Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 11/184 (5%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPL--LVATLGNFTEVVELLLEYKP 453
           G  PL  A +  +  IV +LL  GA+ +       TPL  L  T     E + LL++Y  
Sbjct: 72  GNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGA 131

Query: 454 NV-NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIH---AVKGGHRG 509
            + N++D++GC  L +AC D    +   +++ G    I D+ G  N IH           
Sbjct: 132 KINNSVDEEGCGPL-LACTDPSERVFKKIMSIGFEARIVDKFG-KNHIHRHLMSDNPKAS 189

Query: 510 IVEALLKKYVDVDIPGKERKTAVYTAVEK--GNVPILKLLLTANPDLEIATKDGDTPLLK 567
            +  ++K  +    P  +  T ++    K   NV I+ LLL +  D+    K GD+PL  
Sbjct: 190 TISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLPST-DVNKQNKFGDSPLTL 248

Query: 568 AVKT 571
            +KT
Sbjct: 249 LIKT 252

Length = 446

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 43.4 bits (103), Expect = 6e-06
 Identities = 21/54 (38%), Positives = 33/54 (61%)

Query: 495 GDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLL 548
           G + L  A   G   +V+ LL+K VD++   ++  TA++ A E GN+ +LKLLL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 49.1 bits (117), Expect = 6e-06
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)

Query: 412 VDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACK 471
             ILL  GA+ +       TPL +A      +VV +LLE+  +   LDKDG T L +A +
Sbjct: 98  ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEE 157

Query: 472 DGYYEIAVLLLNSGAYINIQDRSGDSN 498
           +G+ E+  LL       +       +N
Sbjct: 158 NGFREVVQLLSRH----SQCHFELGAN 180

Length = 664

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 48.7 bits (116), Expect = 7e-06
 Identities = 54/253 (21%), Positives = 100/253 (39%), Gaps = 27/253 (10%)

Query: 103 NPDLEIATKTLPRSD-SMVSLCYRTLQSYIAEDN--LDSLQTFLENKRTVADDRDDNGGT 159
           N  L      +   + + +   Y   Q Y+  D+   D ++ F+     V +  D+   T
Sbjct: 15  NVKLSTVKLLIKSCNPNEIVNEYSIFQKYLQRDSPSTDIVKLFINLGANV-NGLDNEYST 73

Query: 160 ALM-----FAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYT---DVCAELLD 211
            L          K  L  V+ L+  GAD+N +++D  +PL      GY    ++   +++
Sbjct: 74  PLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIE 133

Query: 212 HGADLEHRDMGGWSPLMWASYKGHT---DTVALLLDKNADVNAHGN-YHISSLIWAAGRG 267
           +GAD    D  G++ L       H    + + LLL+K  D+N H N     +L       
Sbjct: 134 NGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYN 193

Query: 268 YT----EIVALLVKKGAKVNVGDKVYGTT------PLVWACRKGHVEIVDILLKAGANVD 317
                 +I+ L V  G  +N  +K +          L++  ++    I+D +     +++
Sbjct: 194 IDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSY-IDIN 252

Query: 318 VAGLWAYMPLYSS 330
                 + PLY S
Sbjct: 253 QVDELGFNPLYYS 265

Length = 489

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 48.7 bits (116), Expect = 8e-06
 Identities = 24/72 (33%), Positives = 38/72 (52%)

Query: 445 VELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVK 504
             +LL    + N  D DG T L IAC +G+ ++  +LL  GA   + D+ G + L  A +
Sbjct: 98  ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEE 157

Query: 505 GGHRGIVEALLK 516
            G R +V+ L +
Sbjct: 158 NGFREVVQLLSR 169

Length = 664

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 43.1 bits (102), Expect = 9e-06
 Identities = 20/55 (36%), Positives = 27/55 (49%)

Query: 176 LVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWA 230
           L     D+NA D +  +PL  AA+ G  ++   LL  G DL  RD  G + L  A
Sbjct: 2   LEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 19/56 (33%), Positives = 25/56 (44%)

Query: 546 LLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIA 601
           LL     DL     +G+TPL  A K   LE +Q L+     +   D  G T L +A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 16/33 (48%), Positives = 20/33 (60%)

Query: 156 NGGTALMFAAQKGKLSFVRELVTRGADVNAEDN 188
           +G T L  AA+ G L  V+ L+  GADVNA D 
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 14/33 (42%), Positives = 23/33 (69%)

Query: 461 DGCTALTIACKDGYYEIAVLLLNSGAYINIQDR 493
           DG T L +A ++G+ E+  LLL +GA +N +D+
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 40.8 bits (96), Expect = 5e-05
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 415 LLKAG-ANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIA 469
           LL+ G  +++       TPL +A      E+V+ LL+   ++N  D DG TAL +A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 15/32 (46%), Positives = 20/32 (62%)

Query: 189 DNWSPLTYAAREGYTDVCAELLDHGADLEHRD 220
           D  +PL  AAR G+ +V   LL+ GAD+  RD
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARD 32

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 46.0 bits (109), Expect = 5e-05
 Identities = 24/56 (42%), Positives = 33/56 (58%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEY 451
           G TPL  AC  GHV++V +LL+ GA+  +      TPL +A    F EVV+LL  +
Sbjct: 115 GRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRH 170

Length = 664

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 45.4 bits (107), Expect = 7e-05
 Identities = 54/245 (22%), Positives = 85/245 (34%), Gaps = 58/245 (23%)

Query: 14  GDSNLIHAVKGGHRGIVEALLK--KYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDK 71
           G S +  A+K      ++ L+K     DV  P    +L DA+   D          LLD 
Sbjct: 35  GISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDV----KAVEELLDL 90

Query: 72  NKHKS---LKERKTAVYTAVEKGNVPILKLLLT--ANPDLEIATKTLPRSDSMVSLCYRT 126
            K       K+  T ++ A     + I+KLL+   A+PD+    K  P            
Sbjct: 91  GKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSP------------ 138

Query: 127 LQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAE 186
                                             L  A   G +  +  L+   A ++ E
Sbjct: 139 ----------------------------------LHLAVMMGDIKGIELLIDHKACLDIE 164

Query: 187 DNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLM-WASYKGHTDTVALLLDK 245
           D    +PL  A  +G   +C  LLD GA++++    G    + +A      D V L + +
Sbjct: 165 DCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKR 224

Query: 246 NADVN 250
            AD N
Sbjct: 225 GADCN 229

Length = 413

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 45.7 bits (108), Expect = 7e-05
 Identities = 41/143 (28%), Positives = 59/143 (41%), Gaps = 19/143 (13%)

Query: 127 LQSYIA--EDNLDSLQTFLENK-----RTVADDRDDNGGTALMFAAQKGKLSF------V 173
           +Q  IA  + +L++L+   ENK       +  +   +   A M   +  +L+        
Sbjct: 40  IQEEIARIDTHLEALEA-TENKDATPDHNLTTEEVIDPVVAHMLTVELCQLAASGDAVGA 98

Query: 174 RELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYK 233
           R L+T GAD N  D D  +PL  A   G+  V   LL+ GAD    D  G +PL  A   
Sbjct: 99  RILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEEN 158

Query: 234 GHTDTVALLL-----DKNADVNA 251
           G  + V LL            NA
Sbjct: 159 GFREVVQLLSRHSQCHFELGANA 181

Length = 664

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 39.9 bits (94), Expect = 7e-05
 Identities = 13/30 (43%), Positives = 21/30 (70%)

Query: 289 YGTTPLVWACRKGHVEIVDILLKAGANVDV 318
            G TPL  A R G++E+V +LL+ GA+++ 
Sbjct: 1   DGNTPLHLAARNGNLELVKLLLEHGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 39.9 bits (94), Expect = 7e-05
 Identities = 13/30 (43%), Positives = 21/30 (70%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDV 424
            G TPL  A R G++E+V +LL+ GA+++ 
Sbjct: 1   DGNTPLHLAARNGNLELVKLLLEHGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 40.4 bits (95), Expect = 8e-05
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVA 436
            G TPL  A + G +E+V  LLK G ++++      T L +A
Sbjct: 15  NGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 39.5 bits (93), Expect = 9e-05
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 289 YGTTPLVWACRKGHVEIVDILLKAGANVDV 318
            G TPL  A   G++E+V +LL  GA+++ 
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 39.5 bits (93), Expect = 9e-05
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDV 424
            G TPL  A   G++E+V +LL  GA+++ 
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 44.7 bits (105), Expect = 1e-04
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 7/158 (4%)

Query: 128 QSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAED 187
           Q+   + N D + T LE    V + RD    T + +AA +  +  +  L+  GAD+ A  
Sbjct: 347 QASTLDRNKDIVITLLELGANV-NARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALS 405

Query: 188 NDNWSPLTYA--AREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKG-HTDTVALLLD 244
               + L +A      Y  V   L+D GA++  ++    +PL +A  K    D + +LLD
Sbjct: 406 QKIGTALHFALCGTNPYMSV-KTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLD 464

Query: 245 KNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKV 282
             ADVNA    +   L+ A    Y  IV +L+  GA++
Sbjct: 465 NGADVNAINIQNQYPLLIAL--EYHGIVNILLHYGAEL 500

Length = 682

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 209 LLDHG-ADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWA 263
           LL+HG  DL   D  G +PL  A+  G  + V  LL    D+N   +  +++L  A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 43.5 bits (103), Expect = 2e-04
 Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 7/117 (5%)

Query: 510 IVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPL---- 565
            ++ ++ +    D   K+    +Y A E  N+ ++K+LL    D+  +TK+  TPL    
Sbjct: 17  NIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLS 76

Query: 566 -LKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAM--RARSKTIVEVFIRNPKN 619
            +K   T   E +++L++  A + A D  G T L  A+  ++ S +IVE  + N  N
Sbjct: 77  NIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGAN 133

Length = 422

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 43.4 bits (102), Expect = 3e-04
 Identities = 54/244 (22%), Positives = 97/244 (39%), Gaps = 57/244 (23%)

Query: 18  LIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSL 77
           L+ A+K G   I++ L+   VD  I          L +          + +LD     ++
Sbjct: 72  LLTAIKIGAHDIIKLLIDNGVDTSI----------LPIPCIEKD--MIKTILDCGIDVNI 119

Query: 78  KER--KTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDN 135
           K+   KT ++ A++KG++  +K+L     D+ I            + CY  +   I  + 
Sbjct: 120 KDAELKTFLHYAIKKGDLESIKMLFEYGADVNIED---------DNGCY-PIHIAIKHNF 169

Query: 136 LDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRG--------------- 180
            D ++  LE     A+ +D+NG + L  AA+ G  + ++ L+  G               
Sbjct: 170 FDIIKLLLEKG-AYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLH 228

Query: 181 ----------------ADVNAEDNDNWSPLTYAAREGYT-DVCAELLDHGADLEHRDMGG 223
                           A +N +D D  +PL +A       D+   LL H AD+  +D  G
Sbjct: 229 NAIIHNRSAIELLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKG 288

Query: 224 WSPL 227
            +P+
Sbjct: 289 ENPI 292

Length = 434

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 38.9 bits (91), Expect = 3e-04
 Identities = 20/56 (35%), Positives = 29/56 (51%)

Query: 447 LLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHA 502
           LL     ++NA D +G T L +A K G  E+   LL  G  +N++D  G + L  A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 38.9 bits (91), Expect = 3e-04
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 275 LVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDV 318
           L++ G          G TPL  A + G +E+V  LLK G ++++
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNL 44

Length = 56

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 43.5 bits (103), Expect = 3e-04
 Identities = 28/116 (24%), Positives = 41/116 (35%), Gaps = 16/116 (13%)

Query: 487 YINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVE--KGNV-PI 543
            IN  DR G S L  A        +  LL         G    T ++         V  I
Sbjct: 44  NINCPDRLGRSALFVAAIENENLELTELLLNL---SCRGAVGDTLLHAISLEYVDAVEAI 100

Query: 544 LKLLLTANPD-------LEIATKD---GDTPLLKAVKTRNLEAIQMLIDKKAKITA 589
           L  LL A           +  T +   G T L  A   +N E +++L+++ A + A
Sbjct: 101 LLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPA 156

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 42.9 bits (101), Expect = 5e-04
 Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 38/201 (18%)

Query: 241 LLLDKNADVNAHGNYHI-SSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACR 299
           LL D   +   H + ++ S+L+  A  G   ++  L+K     ++GD   G TPL  A  
Sbjct: 512 LLGDNGGE---HDDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDS-KGRTPLHIAAS 567

Query: 300 KGHVEIVDILLKAGANV---DVAGLWAYMPLYSSALADIF---------SEPGLATPLTV 347
           KG+ + V +LLK   NV   D  G  A     S+    IF         S+P  A  L +
Sbjct: 568 KGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDL-L 626

Query: 348 GLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKG 407
              AK        L  +KE +K     G++           +      G T L  A  + 
Sbjct: 627 CTAAKRND-----LTAMKELLKQ----GLN-----------VDSEDHQGATALQVAMAED 666

Query: 408 HVEIVDILLKAGANVDVAGLY 428
           HV++V +L+  GA+VD A   
Sbjct: 667 HVDMVRLLIMNGADVDKANTD 687

Length = 823

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 37.6 bits (88), Expect = 5e-04
 Identities = 15/29 (51%), Positives = 20/29 (68%)

Query: 223 GWSPLMWASYKGHTDTVALLLDKNADVNA 251
           G +PL  A+  G+ + V LLLDK AD+NA
Sbjct: 2   GRTPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 38.0 bits (89), Expect = 0.001
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 5/69 (7%)

Query: 565 LLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLY 624
           L  A K  NLE +++L++K A +   D   DT LH+A R  +  IV++ + +  +   + 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDT--DTALHLAARNGNLEIVKLLLEHGAD---VN 55

Query: 625 RPNKAGETP 633
             +K G T 
Sbjct: 56  AKDKDGNTA 64

Length = 91

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 42.2 bits (99), Expect = 0.001
 Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 31/156 (19%)

Query: 492 DRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN 551
           D +  SNL+     G+  ++E LLK  +D DI   + +T ++ A  KG    + +LL   
Sbjct: 522 DPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHA 581

Query: 552 PDLEIATKDGDTPLLKAV-------------------------------KTRNLEAIQML 580
            ++ I   +G+T L  A+                               K  +L A++ L
Sbjct: 582 CNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKEL 641

Query: 581 IDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN 616
           + +   + + D +G T L +AM      +V + I N
Sbjct: 642 LKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMN 677

Length = 823

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 519 VDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPL 565
           +D++       T ++ A + G + +++ LL    DL +   DG T L
Sbjct: 7   IDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTAL 53

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 36.4 bits (85), Expect = 0.001
 Identities = 13/33 (39%), Positives = 22/33 (66%)

Query: 560 DGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDK 592
           DG+TPL  A +  +LE +++L++  A + A DK
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 36.0 bits (84), Expect = 0.001
 Identities = 16/31 (51%), Positives = 19/31 (61%)

Query: 430 WTPLLVATLGNFTEVVELLLEYKPNVNALDK 460
            TPL +A      EVV+LLLE   +VNA DK
Sbjct: 3   NTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 36.1 bits (84), Expect = 0.001
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 223 GWSPLMWASYKGHTDTVALLLDKNADVNA 251
           G +PL  A+  G+ + V LLL+  AD+NA
Sbjct: 2   GNTPLHLAARNGNLELVKLLLEHGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 41.6 bits (98), Expect = 0.001
 Identities = 61/259 (23%), Positives = 96/259 (37%), Gaps = 48/259 (18%)

Query: 433 LLVATLGNFTEVVELLLEYKP-NVNALDKDGCTALTIACKDG-YYEIAVLLLNSGAYINI 490
           L  A  G+   V   L E K  N+N  D+ G +AL +A  +    E+  LLLN      +
Sbjct: 22  LPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSCRGAV 81

Query: 491 QDRSGDSNLIHAVKGGHRGIVEALL-------KKYVDVDIPGKERK-------TAVYTAV 536
            D      L+HA+   +   VEA+L       +K   +++   +         TA++ A 
Sbjct: 82  GD-----TLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAA 136

Query: 537 EKGNVPILKLLLTANPDLEI-ATKD-------------GDTPLLKAVKTRNLEAIQMLID 582
            + N  I+KLLL     +   A  D             G++PL  A    +   + +L +
Sbjct: 137 HRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSE 196

Query: 583 KKAKITAVDKRGDTVLHIA-MRARSKTIVEVFIRNPKNNILLYR------------PNKA 629
             A I   D  G+T+LH+  M    K   E       N  L                N  
Sbjct: 197 DPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQ 256

Query: 630 GETPYSIDMNNQKSILAQE 648
           G TP  +     + +L + 
Sbjct: 257 GLTPLKLAAKEGRIVLFRL 275

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional

 Score = 41.7 bits (98), Expect = 0.001
 Identities = 65/271 (23%), Positives = 115/271 (42%), Gaps = 50/271 (18%)

Query: 390 VMHLSYGTTPLVWACRKGHV------EIVDILLKAGANVD---VAGLYCWTPLLVATLGN 440
           V +  Y  TPL    R   +      +IV +LLK GA+++     G+      +  +  N
Sbjct: 63  VNYKGYIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNIN 122

Query: 441 FTEVVELLLEYKPNVNAL-DKDGCTALTIACKDGYYEIAV--LLLNSG------------ 485
             +++  LL    NVN + +  G   L +  +    +  V  +LL+ G            
Sbjct: 123 NCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGL 182

Query: 486 AYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYT------AVEKG 539
             +NI  R+ D ++I ++K     +++ L+KK V+++      ++ + +       + K 
Sbjct: 183 TPMNIYLRN-DIDVI-SIK-----VIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKK 235

Query: 540 NVPILKLLLTANPDLEIATKD--GDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTV 597
              +L  +L     ++I  KD  G  PLL + K  N EA   L+     I  V K GDTV
Sbjct: 236 EFKVLNFIL---KYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTV 292

Query: 598 LHIAMRARSKTIVEVFIRNPKNNILLYRPNK 628
           L  A++  +  ++        N IL  +P K
Sbjct: 293 LTYAIKHGNIDML--------NRILQLKPGK 315

Length = 494

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 18/56 (32%), Positives = 30/56 (53%)

Query: 480 LLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTA 535
           LL +    +N  D +G++ L  A K G   +V+ LLK  VD+++   +  TA+  A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 28/206 (13%)

Query: 124 YRTLQSYIAEDNLDSLQTFLE---NKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRG 180
           Y  L +Y     LD  + F+E   ++    ++ DD+G   L  A++      V  L+T G
Sbjct: 38  YHILHAYCGIKGLD--ERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHG 95

Query: 181 ADVNAEDNDNWSPLTYAAREGYTDVCAE----LLDHGADLEHR-DMGGWSPLMWASYKGH 235
           AD NA D  + +PL Y +  G  D   E    L+ +GA + +  D  G  PL+       
Sbjct: 96  ADPNACDKQHKTPLYYLS--GTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-----AC 148

Query: 236 TDTVALLLDKNAD-------VNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKV 288
           TD    +  K          V+  G  HI   + +     + I + ++K G   +  D  
Sbjct: 149 TDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTI-SWMMKLGISPSKPDH- 206

Query: 289 YGTTPLVWACRK--GHVEIVDILLKA 312
            G TPL   C K   +V+I+++LL +
Sbjct: 207 DGNTPLHIVCSKTVKNVDIINLLLPS 232

Length = 446

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 35.3 bits (82), Expect = 0.003
 Identities = 14/30 (46%), Positives = 19/30 (63%)

Query: 156 NGGTALMFAAQKGKLSFVRELVTRGADVNA 185
           +G T L  AA+ G L  V+ L+  GAD+NA
Sbjct: 1   DGNTPLHLAARNGNLELVKLLLEHGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 34.8 bits (81), Expect = 0.004
 Identities = 14/28 (50%), Positives = 18/28 (64%)

Query: 260 LIWAAGRGYTEIVALLVKKGAKVNVGDK 287
           L  AA  G+ E+V LL++ GA VN  DK
Sbjct: 6   LHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	651
KOG4177|consensus	1143		100.0
KOG4177|consensus	1143		100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
KOG0510|consensus	929		100.0
KOG0510|consensus	929		100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
KOG0508|consensus	615		100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
PHA02792	631	ankyrin-like protein; Provisional	100.0
PHA02989	494	ankyrin repeat protein; Provisional	100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
PHA02989	494	ankyrin repeat protein; Provisional	100.0
KOG0508|consensus	615		100.0
PHA02792	631	ankyrin-like protein; Provisional	100.0
PHA02875	413	ankyrin repeat protein; Provisional	100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
PHA02875	413	ankyrin repeat protein; Provisional	100.0
PHA02798	489	ankyrin-like protein; Provisional	100.0
KOG4412|consensus	226		100.0
KOG4412|consensus	226		100.0
PHA02798	489	ankyrin-like protein; Provisional	100.0
KOG0509|consensus	600		100.0
KOG0509|consensus	600		100.0
PHA02795	437	ankyrin-like protein; Provisional	99.97
PHA02859	209	ankyrin repeat protein; Provisional	99.97
PHA02859	209	ankyrin repeat protein; Provisional	99.97
PHA02795	437	ankyrin-like protein; Provisional	99.97
KOG4369|consensus	2131		99.96
KOG4369|consensus	2131		99.96
KOG0502|consensus	296		99.95
KOG0502|consensus	296		99.94
KOG0507|consensus	854		99.94
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.93
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.93
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.92
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.92
KOG0507|consensus	854		99.92
KOG0505|consensus	527		99.91
KOG0514|consensus	452		99.9
PHA02743	166	Viral ankyrin protein; Provisional	99.89
PHA02743	166	Viral ankyrin protein; Provisional	99.89
KOG0514|consensus	452		99.89
KOG0505|consensus	527		99.88
PHA02741	169	hypothetical protein; Provisional	99.87
PHA02884	300	ankyrin repeat protein; Provisional	99.86
PHA02741	169	hypothetical protein; Provisional	99.86
PHA02884	300	ankyrin repeat protein; Provisional	99.85
KOG0512|consensus	228		99.84
KOG0512|consensus	228		99.83
PHA02736	154	Viral ankyrin protein; Provisional	99.83
PHA02736	154	Viral ankyrin protein; Provisional	99.83
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.76
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.76
KOG0195|consensus	448		99.75
KOG0195|consensus	448		99.75
KOG3676|consensus	782		99.75
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.74
KOG3676|consensus	782		99.73
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.72
KOG4214|consensus	117		99.65
KOG4214|consensus	117		99.6
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.52
KOG1710|consensus	396		99.51
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.51
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.48
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.48
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.45
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.43
KOG0515|consensus	752		99.4
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.39
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.38
KOG1710|consensus	396		99.37
KOG0515|consensus	752		99.35
PF13606	30	Ank_3: Ankyrin repeat	99.01
PF13606	30	Ank_3: Ankyrin repeat	98.87
KOG0506|consensus	622		98.84
KOG0782|consensus	1004		98.84
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.82
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.82
KOG0783|consensus	1267		98.82
KOG0818|consensus	669		98.77
KOG0506|consensus	622		98.73
KOG0783|consensus	1267		98.71
KOG0782|consensus	1004		98.7
KOG0818|consensus	669		98.68
KOG3609|consensus	822		98.51
KOG0705|consensus	749		98.47
KOG0705|consensus	749		98.45
KOG0522|consensus	560		98.42
KOG3609|consensus	822		98.36
KOG2384|consensus	223		98.26
KOG0511|consensus	516		98.21
KOG2384|consensus	223		98.17
KOG0521|consensus	785		98.14
KOG0522|consensus	560		98.13
KOG0511|consensus	516		98.07
KOG0521|consensus	785		97.9
KOG0520|consensus	975		97.83
KOG0520|consensus	975		97.69
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	97.58
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	97.18
KOG2505|consensus	591		97.16
KOG2505|consensus	591		97.03
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.84
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	96.64
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	96.12
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	95.57
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	95.46
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	94.2
PLN03218	1060	maturation of RBCL 1; Provisional	93.59
PLN03218	1060	maturation of RBCL 1; Provisional	89.72
PLN03077	857	Protein ECB2; Provisional	86.98
PLN03081	697	pentatricopeptide (PPR) repeat-containing protein;	85.84

>KOG4177|consensus

Probab=100.00  E-value=9.6e-65  Score=518.55  Aligned_cols=559  Identities=31%  Similarity=0.399  Sum_probs=494.6

Q ss_pred             cCCCCCchHHHHhhcCcHHHHHHHHhhcCCccCCCCccchhhhhhhhccCCchHHHHHHHhhCCC--CCccccchHHHHH
Q psy11819         10 RDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKH--KSLKERKTAVYTA   87 (651)
Q Consensus        10 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~l~~A~~~~~~~i~~~Ll~~~~~--~~~~~~~~~l~~A   87 (651)
                      +.+.|.|++|+|+-+|+.+++++|+++|+.+++....+  .++++.|++.|+.++++.|+..+..  ....++.||||.|
T Consensus        50 ~sk~~~~pl~~aa~~~~~~v~~~ll~~~a~v~~~~~~~--~~plh~a~~~~~a~~v~~ll~~ga~~~~~~~~~lTpLh~a  127 (1143)
T KOG4177|consen   50 DSKSGFTPLHIAAHYGNENVAELLLNRGAIVNATARNG--ITPLHVASKRGDAEMVKLLLCRGAQIDARDRDGLTPLHCA  127 (1143)
T ss_pred             hcccccCHHHHHhhhhhhhhhhhhhccccccCcccccC--ccHHHHHHhhcchhHHHHHHhccCchhhcccCCCcchhhh
Confidence            34479999999999999999999999999999877644  4679999999999999999999864  4556788999999


Q ss_pred             HhcCCHHHHHHHHHcCCChhhhhccCCCCchh--hHHHHh-----------hHHHHHHhhCHHHHHHHHHcCCCCCCCCC
Q psy11819         88 VEKGNVPILKLLLTANPDLEIATKTLPRSDSM--VSLCYR-----------TLQSYIAEDNLDSLQTFLENKRTVADDRD  154 (651)
Q Consensus        88 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~--~~~~~~-----------~l~~~~~~~~~~~v~~~l~~~~~~~~~~~  154 (651)
                      ++.|+.+++++|+..+++..+.++......+.  ...+.+           .+..+...+ ...+-.++.......+..+
T Consensus       128 a~~g~~~~~~~ll~~~a~~~~k~~~g~t~l~~a~~~~~~~ll~~~~~~d~l~~~~~~~~~-~~~~~~ll~~~~~~~~a~~  206 (1143)
T KOG4177|consen  128 ARKGHVQVIELLLQHGAPINIKTKNGLSPLHMAAQVACARLLLEYKAPDYLRLHVAAHCG-HARVAKLLLDKKADPNASA  206 (1143)
T ss_pred             cccccHHHHHHHHHccCCCcccccCCCCchhhhcchhhhHHhhhcccchhhhhhHHhhcc-hHHHHhhhhcccCCccccc
Confidence            99999999999999998887766532211111  011111           112333333 3344455566667778889


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcC
Q psy11819        155 DNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKG  234 (651)
Q Consensus       155 ~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~  234 (651)
                      .++.||+|.|+..+.+++++.++.+|+++...|..|.+|||.|+..|+.+++.+|+.+|+.++..+..+.||+|.|+..+
T Consensus       207 ~~~~tpl~~a~~~nri~~~eLll~~gadv~a~d~~gl~~lh~a~~~g~~~i~~~l~~~ga~~~~~~vr~~tplh~AA~~~  286 (1143)
T KOG4177|consen  207 LNGFTPLHIACKKNRIKVVELLLKHGADVSAKDESGLTPLHVAAFMGHLDIVKLLLQHGASVNVSTVRGETPLHMAARAG  286 (1143)
T ss_pred             cCCCCchhhhccccccceeeeeeeccCcCCcccccCccHHHHHHhccchhHHHHHHhcccccCcccccccCcchhhhccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q psy11819        235 HTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGA  314 (651)
Q Consensus       235 ~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~  314 (651)
                      ..+++++|+++|+++..++....|+++.+...|..++++++++.+...+.... .+.+|+|.++..++.++..+|...+.
T Consensus       287 ~~e~~~~ll~~ga~~~~~~~~~kt~l~~a~~~g~~~i~~~~l~~~~~~~aar~-~g~t~lHlaa~~~~~~~~~~l~~~~~  365 (1143)
T KOG4177|consen  287 QVEVCKLLLQNGADVLAKARDDQTPLHIASRLGHEEIVHLLLQAGATPNAART-AGYTPLHLAAKEGQVEVAGALLEHGA  365 (1143)
T ss_pred             hhhhHhhhhccCcccccccccccChhhhhcccchHHHHHHHhhccCCccccCc-CCcccccHhhhhhhHHHHHHhhcccc
Confidence            99999999999999999999999999999999999999999999999998888 79999999999999998888888766


Q ss_pred             CcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcC
Q psy11819        315 NVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLS  394 (651)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (651)
                      .-....                                                                         .
T Consensus       366 ~~~~a~-------------------------------------------------------------------------~  372 (1143)
T KOG4177|consen  366 QRRQAE-------------------------------------------------------------------------E  372 (1143)
T ss_pred             ccCccc-------------------------------------------------------------------------c
Confidence            543322                                                                         4


Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC-
Q psy11819        395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDG-  473 (651)
Q Consensus       395 ~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~-  473 (651)
                      .+.+|++.|+..|..+.++.++..|++++..+..|.||+|.++..++..+++.++++|++++..+..|.|++|.|+..| 
T Consensus       373 k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~  452 (1143)
T KOG4177|consen  373 KGFTPLHLAVKSGRVSVVELLLEAGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGR  452 (1143)
T ss_pred             cCCcchhhhcccCchhHHHhhhhccCCcccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhccc
Confidence            5789999999999999999999999999999999999999999999999999999999999999999999999999999 


Q ss_pred             cHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q psy11819        474 YYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPD  553 (651)
Q Consensus       474 ~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~  553 (651)
                      ..+....+++.|++++..-..|.||||.|...|+.+++..|++.++..+.....+-+++|.|...+...+++.++++|++
T Consensus       453 ~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~  532 (1143)
T KOG4177|consen  453 YLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGAN  532 (1143)
T ss_pred             HhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCc
Confidence            88888889999999999999999999999999999999999999888888888899999999999999999999999999


Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCc
Q psy11819        554 LEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP  633 (651)
Q Consensus       554 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~  633 (651)
                      ++.++..|+||||.|+.+|++++|++|+++|++++.+|+.|+||||.|+..|+.+|+++|+++|+.   ++..|.+|.||
T Consensus       533 v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~---vna~d~~g~Tp  609 (1143)
T KOG4177|consen  533 VDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGAS---VNAADLDGFTP  609 (1143)
T ss_pred             eehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCC---CCcccccCcch
Confidence            999999999999999999999999999999999999999999999999999999999999999999   77899999999


Q ss_pred             ccccccccchhhhhc
Q psy11819        634 YSIDMNNQKSILAQE  648 (651)
Q Consensus       634 l~~a~~~~~~~~~~~  648 (651)
                      |++|..+++..+.++
T Consensus       610 L~iA~~lg~~~~~k~  624 (1143)
T KOG4177|consen  610 LHIAVRLGYLSVVKL  624 (1143)
T ss_pred             hHHHHHhcccchhhH
Confidence            999999999877654

>KOG4177|consensus

Probab=100.00  E-value=9.9e-61  Score=489.18  Aligned_cols=543  Identities=29%  Similarity=0.409  Sum_probs=490.2

Q ss_pred             CccCCCCCchHHHHhhcCcHHHHHHHHhhcCCccCCCCccchhhhhhhhccCCchHHHHHHHhhCCCCC--ccccchHH-
Q psy11819          8 SKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKS--LKERKTAV-   84 (651)
Q Consensus         8 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~l~~A~~~~~~~i~~~Ll~~~~~~~--~~~~~~~l-   84 (651)
                      +..+.+|.||||.|++.|+.++++.|+..|+.++..+.  ..-+||+.|+..|+.+++.+|+..+....  ++.|.||+ 
T Consensus        81 ~~~~~~~~~plh~a~~~~~a~~v~~ll~~ga~~~~~~~--~~lTpLh~aa~~g~~~~~~~ll~~~a~~~~k~~~g~t~l~  158 (1143)
T KOG4177|consen   81 NATARNGITPLHVASKRGDAEMVKLLLCRGAQIDARDR--DGLTPLHCAARKGHVQVIELLLQHGAPINIKTKNGLSPLH  158 (1143)
T ss_pred             CcccccCccHHHHHHhhcchhHHHHHHhccCchhhccc--CCCcchhhhcccccHHHHHHHHHccCCCcccccCCCCchh
Confidence            44677899999999999999999999999999887776  44589999999999999999998875433  33455554 


Q ss_pred             ----------------------HHHHhcCCHHHHHHHHHcCCChhhhhccCCCCchhhHHHHhhHHHHHHhhCHHHHHHH
Q psy11819         85 ----------------------YTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTF  142 (651)
Q Consensus        85 ----------------------~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~  142 (651)
                                            +.|+..++.++++++++..++.....          ......++.++..+..++++-+
T Consensus       159 ~a~~~~~~~ll~~~~~~d~l~~~~~~~~~~~~~~~ll~~~~~~~~a~~----------~~~~tpl~~a~~~nri~~~eLl  228 (1143)
T KOG4177|consen  159 MAAQVACARLLLEYKAPDYLRLHVAAHCGHARVAKLLLDKKADPNASA----------LNGFTPLHIACKKNRIKVVELL  228 (1143)
T ss_pred             hhcchhhhHHhhhcccchhhhhhHHhhcchHHHHhhhhcccCCccccc----------cCCCCchhhhccccccceeeee
Confidence                                  56677899999999999877664332          1234457777777777766555


Q ss_pred             HHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCC
Q psy11819        143 LENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMG  222 (651)
Q Consensus       143 l~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~  222 (651)
                      + .+..++...+..|.+|||.|+..|+++++.+|+..|+.++..+..+.||+|.|++.+..|+.++|+++|+++......
T Consensus       229 l-~~gadv~a~d~~gl~~lh~a~~~g~~~i~~~l~~~ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~~ga~~~~~~~~  307 (1143)
T KOG4177|consen  229 L-KHGADVSAKDESGLTPLHVAAFMGHLDIVKLLLQHGASVNVSTVRGETPLHMAARAGQVEVCKLLLQNGADVLAKARD  307 (1143)
T ss_pred             e-eccCcCCcccccCccHHHHHHhccchhHHHHHHhcccccCcccccccCcchhhhccchhhhHhhhhccCccccccccc
Confidence            4 556677889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCC
Q psy11819        223 GWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGH  302 (651)
Q Consensus       223 ~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~  302 (651)
                      ..||+|.|...|+.+++++++..++.++.....+.+++|+++..++.++..++...+........ .+.+|++.|+..|+
T Consensus       308 ~kt~l~~a~~~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~a~~-k~~~pl~la~~~g~  386 (1143)
T KOG4177|consen  308 DQTPLHIASRLGHEEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQRRQAEE-KGFTPLHLAVKSGR  386 (1143)
T ss_pred             ccChhhhhcccchHHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhccccccCcccc-cCCcchhhhcccCc
Confidence            99999999999999999999999999999999999999999999999999999888887777776 69999999999999


Q ss_pred             HHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCCCCccch
Q psy11819        303 VEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTF  382 (651)
Q Consensus       303 ~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (651)
                      .++++.++..|.+++..+                                                              
T Consensus       387 ~~~v~Lll~~ga~~~~~g--------------------------------------------------------------  404 (1143)
T KOG4177|consen  387 VSVVELLLEAGADPNSAG--------------------------------------------------------------  404 (1143)
T ss_pred             hhHHHhhhhccCCcccCC--------------------------------------------------------------
Confidence            999999999999877544                                                              


Q ss_pred             hhhHHHHHhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcC-cHHHHHHHHhcCCCCCCCCCC
Q psy11819        383 SSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGN-FTEVVELLLEYKPNVNALDKD  461 (651)
Q Consensus       383 ~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~~Ll~~~~~~~~~~~~  461 (651)
                                 ..|.||||.|+..++..+++.++++|++++..+..|+|++|.|+..+ ..+....+++.|.+++.....
T Consensus       405 -----------k~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~  473 (1143)
T KOG4177|consen  405 -----------KNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQ  473 (1143)
T ss_pred             -----------CCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccc
Confidence                       56889999999999999999999999999999999999999999999 889999999999999999999


Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCH
Q psy11819        462 GCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNV  541 (651)
Q Consensus       462 g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~  541 (651)
                      |.||||+|+..|+.++++.|++.++..+.....+-+++|.|...+...+.+.++++|++++.++..|+||||.|+..|+.
T Consensus       474 G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v  553 (1143)
T KOG4177|consen  474 GFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNV  553 (1143)
T ss_pred             cCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCc
Confidence            99999999999999999999999988888889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcc
Q psy11819        542 PILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNI  621 (651)
Q Consensus       542 ~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~  621 (651)
                      .+|++|+++|++++.+++.|+||||.|+..|+.+++++|+++||++|..|.+|.|||++|++.|++.+++.|...+..+.
T Consensus       554 ~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~  633 (1143)
T KOG4177|consen  554 DLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPA  633 (1143)
T ss_pred             hHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999988721


Q ss_pred             c--ccCCCCCCCCccccc
Q psy11819        622 L--LYRPNKAGETPYSID  637 (651)
Q Consensus       622 ~--~~~~~~~g~t~l~~a  637 (651)
                      .  ....+..|.+|..++
T Consensus       634 ~~~~~~e~~~g~~p~~v~  651 (1143)
T KOG4177|consen  634 ATDPVKENRKGAVPEDVA  651 (1143)
T ss_pred             cccchhhhhcccChhhHH
Confidence            1  334678899987765

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=8e-56  Score=467.53  Aligned_cols=352  Identities=28%  Similarity=0.324  Sum_probs=325.2

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcCCH
Q psy11819        157 GGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHT  236 (651)
Q Consensus       157 ~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~  236 (651)
                      ..++++.|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.
T Consensus       145 ~~~~l~~~i~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~  224 (682)
T PHA02876        145 YMKLIKERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNI  224 (682)
T ss_pred             hhHHHHHHHHCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCH
Confidence            45689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcCCC
Q psy11819        237 DTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHV-EIVDILLKAGAN  315 (651)
Q Consensus       237 ~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~-~~v~~Ll~~~~~  315 (651)
                      +++++|++.+.+++..    .++++.|+..++.+.+++|++.|.+++..+. .|.||||+|+..++. +++++|++.|++
T Consensus       225 ~ivk~Ll~~~~~~~~~----~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~-~g~TpLh~Aa~~~~~~~iv~lLl~~gad  299 (682)
T PHA02876        225 DTIKAIIDNRSNINKN----DLSLLKAIRNEDLETSLLLYDAGFSVNSIDD-CKNTPLHHASQAPSLSRLVPKLLERGAD  299 (682)
T ss_pred             HHHHHHHhcCCCCCCC----cHHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHhCCCHHHHHHHHHHCCCC
Confidence            9999999998877543    3789999999999999999999999988777 799999999999986 689999999998


Q ss_pred             cccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCC
Q psy11819        316 VDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSY  395 (651)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (651)
                      ++..+                                                                         ..
T Consensus       300 in~~d-------------------------------------------------------------------------~~  306 (682)
T PHA02876        300 VNAKN-------------------------------------------------------------------------IK  306 (682)
T ss_pred             CCCcC-------------------------------------------------------------------------CC
Confidence            77543                                                                         55


Q ss_pred             CChHHHHHHHcC-CHHHHHHHHHcCCCCCCcCcCCChHHHHHHhc-CcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q psy11819        396 GTTPLVWACRKG-HVEIVDILLKAGANVDVAGLYCWTPLLVATLG-NFTEVVELLLEYKPNVNALDKDGCTALTIACKDG  473 (651)
Q Consensus       396 ~~t~l~~A~~~~-~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~-~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~  473 (651)
                      |.||||.|+..| ..++++.|+..|++++..+..|.||||+|+.. +..++++.|++.|++++.++..|.||||+|+..|
T Consensus       307 g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~  386 (682)
T PHA02876        307 GETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRN  386 (682)
T ss_pred             CCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcC
Confidence            889999999999 69999999999999999999999999999884 5789999999999999999999999999999999


Q ss_pred             cHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCc-HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHhcC
Q psy11819        474 YYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGH-RGIVEALLKKYVDVDIPGKERKTAVYTAVEKG-NVPILKLLLTAN  551 (651)
Q Consensus       474 ~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~-~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~-~~~~v~~Ll~~~  551 (651)
                      +.+++++|+++|++++..+..|.||||+|+..++ ..++++|+++|++++.+|..|.||||+|+..+ +.+++++|++.|
T Consensus       387 ~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~G  466 (682)
T PHA02876        387 NVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNG  466 (682)
T ss_pred             CHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCC
Confidence            9999999999999999999999999999987655 56799999999999999999999999999876 689999999999


Q ss_pred             CCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc
Q psy11819        552 PDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT  588 (651)
Q Consensus       552 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~  588 (651)
                      ++++..|..|.|||+.|+.++  ++++.|+..|+++.
T Consensus       467 ad~n~~d~~g~tpl~~a~~~~--~~v~~Ll~~~a~~~  501 (682)
T PHA02876        467 ADVNAINIQNQYPLLIALEYH--GIVNILLHYGAELR  501 (682)
T ss_pred             CCCCCCCCCCCCHHHHHHHhC--CHHHHHHHCCCCCC
Confidence            999999999999999999876  57999999999876

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=7.7e-56  Score=467.66  Aligned_cols=408  Identities=25%  Similarity=0.263  Sum_probs=252.9

Q ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCCHH-------------------------
Q psy11819        151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGAD-VNAEDNDNWSPLTYAAREGYTD-------------------------  204 (651)
Q Consensus       151 ~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~~t~L~~A~~~g~~~-------------------------  204 (651)
                      ...+..+.||||.|+..|+.++|+.|++.+++ ++..|..|.||||+|+..++..                         
T Consensus        35 ~~~~~~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  114 (682)
T PHA02876         35 CENESIPFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNK  114 (682)
T ss_pred             cccccccchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCCCCccccccccccchhhcccccHHHHHHHH
Confidence            33456678888888888888888888887665 4556777888888777443321                         


Q ss_pred             ------HHHHHHH--cCCCCCC----CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHHH
Q psy11819        205 ------VCAELLD--HGADLEH----RDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIV  272 (651)
Q Consensus       205 ------iv~~Ll~--~~~~~~~----~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~v  272 (651)
                            ++..|.+  .+.++..    ......++++.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++
T Consensus       115 ~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv  194 (682)
T PHA02876        115 HKLDEACIHILKEAISGNDIHYDKINESIEYMKLIKERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMV  194 (682)
T ss_pred             HHHHHHHHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Confidence                  0111111  1111111    112234567777777777777777777777777777777777777777777777


Q ss_pred             HHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcc
Q psy11819        273 ALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAK  352 (651)
Q Consensus       273 ~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (651)
                      ++|+++|++++..+. .|.+||+.|+..++.+++++|++.+.+++.                                  
T Consensus       195 ~~LL~~Gad~n~~~~-~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~----------------------------------  239 (682)
T PHA02876        195 NLLLSYGADVNIIAL-DDLSVLECAVDSKNIDTIKAIIDNRSNINK----------------------------------  239 (682)
T ss_pred             HHHHHCCCCcCccCC-CCCCHHHHHHHcCCHHHHHHHHhcCCCCCC----------------------------------
Confidence            777777777766655 577777777777777777777776655432                                  


Q ss_pred             cCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChH
Q psy11819        353 WGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTP  432 (651)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~  432 (651)
                                                                 +.++++.|+..++.+.+++|++.|++++..+..|.||
T Consensus       240 -------------------------------------------~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~Tp  276 (682)
T PHA02876        240 -------------------------------------------NDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTP  276 (682)
T ss_pred             -------------------------------------------CcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCH
Confidence                                                       2245555666666666666666666666555566666


Q ss_pred             HHHHHhcCcH-HHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC-cHHHHHHHHhCCCCCcccCCCCCcHHHHHHhc-CcHH
Q psy11819        433 LLVATLGNFT-EVVELLLEYKPNVNALDKDGCTALTIACKDG-YYEIAVLLLNSGAYINIQDRSGDSNLIHAVKG-GHRG  509 (651)
Q Consensus       433 l~~a~~~~~~-~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~-~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~-~~~~  509 (651)
                      ||+|+..++. +++++|++.|++++..+..|.||||.|+..| ..+++++|++.|++++..+..|.||||+|+.. ++.+
T Consensus       277 Lh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~  356 (682)
T PHA02876        277 LHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKD  356 (682)
T ss_pred             HHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHH
Confidence            6666655553 4556666666666666666666666666655 35566666666666666666666666666553 3455


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCC-HHHHHHHHHcCCCCc
Q psy11819        510 IVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRN-LEAIQMLIDKKAKIT  588 (651)
Q Consensus       510 ~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~  588 (651)
                      ++++|+++|++++.++..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..++ ..++++|++.|++++
T Consensus       357 iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin  436 (682)
T PHA02876        357 IVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVN  436 (682)
T ss_pred             HHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence            5666666666666666666666666666666666666666666666666666666666655443 344566666666666


Q ss_pred             ccCCCCCcHHHHHHHcC-ChHHHHHHHhCCCCcccccCCCCCCCCccccccc
Q psy11819        589 AVDKRGDTVLHIAMRAR-SKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMN  639 (651)
Q Consensus       589 ~~d~~g~t~l~~A~~~~-~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~  639 (651)
                      .+|..|+||||+|+..+ +.+++++|+++|++   ++.+|..|.||+++|..
T Consensus       437 ~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad---~n~~d~~g~tpl~~a~~  485 (682)
T PHA02876        437 SKNKDLSTPLHYACKKNCKLDVIEMLLDNGAD---VNAINIQNQYPLLIALE  485 (682)
T ss_pred             cCCCCCChHHHHHHHhCCcHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHH
Confidence            66666666666666544 45666666666655   45556666666666554

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=3.8e-52  Score=424.52  Aligned_cols=437  Identities=18%  Similarity=0.209  Sum_probs=251.8

Q ss_pred             ccccCCccCCCCCchHHHHhhc---CcHHHHHHHHhhcCCccCCCCccchhhhhhhhccCCchH----HHHHHHhhCCCC
Q psy11819          3 QDDVSSKRDRSGDSNLIHAVKG---GHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRS----TTRNLLDKNKHK   75 (651)
Q Consensus         3 ~~~~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~~~~~~l~~A~~~~~~~----i~~~Ll~~~~~~   75 (651)
                      +.++.+++|.+|+||||+|+..   |+.++|++|++.|++++..+  ..+.+||+.|+..|+.+    +++.|++.+...
T Consensus        21 ~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~--~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~   98 (661)
T PHA02917         21 DRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKN--WRQLTPLEEYTNSRHVKVNKDIAMALLEATGYS   98 (661)
T ss_pred             ccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccC--CCCCCHHHHHHHcCChhHHHHHHHHHHhccCCC
Confidence            4455567799999999997655   88999999999999987443  23445555555555533    234444432211


Q ss_pred             CccccchHHHHHHhcCCHHHHHHHHHcCCChhhhhccCCCCchhhHHHHhhHHHHHHhhCHHHHHHHHHcCCCCCCCCCC
Q psy11819         76 SLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDD  155 (651)
Q Consensus        76 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~l~~~~~~~~~~~~  155 (651)
                      ...+...+++.|+.+|+.++|++|+++|+++                                            +..|.
T Consensus        99 n~~~~~~~~~~a~~~~~~e~vk~Ll~~Gadi--------------------------------------------n~~d~  134 (661)
T PHA02917         99 NINDFNIFSYMKSKNVDVDLIKVLVEHGFDL--------------------------------------------SVKCE  134 (661)
T ss_pred             CCCCcchHHHHHhhcCCHHHHHHHHHcCCCC--------------------------------------------CccCC
Confidence            2222234444555555555555555555443                                            22344


Q ss_pred             CCCcHHHHHH--HcCCHHHHHHHHHcCCCCcccCC---CC-----------CCHHHHHHH-----------hCCHHHHHH
Q psy11819        156 NGGTALMFAA--QKGKLSFVRELVTRGADVNAEDN---DN-----------WSPLTYAAR-----------EGYTDVCAE  208 (651)
Q Consensus       156 ~~~t~l~~A~--~~g~~~~v~~Ll~~~~~~~~~~~---~~-----------~t~L~~A~~-----------~g~~~iv~~  208 (651)
                      .|+||||.|+  ..|+.++|++|++.|++++..+.   .|           .||||+|+.           .++.+++++
T Consensus       135 ~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~  214 (661)
T PHA02917        135 NHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKC  214 (661)
T ss_pred             CCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHH
Confidence            5556665332  34556666666666655543322   12           356666553           235566666


Q ss_pred             HHHcCCCCCCCCCCCchHHHHHHHcCCH--HHHHHHHhcCCCCC----CcCCCCCcHHHHHHh-------c--ChHHHHH
Q psy11819        209 LLDHGADLEHRDMGGWSPLMWASYKGHT--DTVALLLDKNADVN----AHGNYHISSLIWAAG-------R--GYTEIVA  273 (651)
Q Consensus       209 Ll~~~~~~~~~~~~~~t~L~~A~~~~~~--~~v~~Ll~~~~~~~----~~~~~~~t~L~~a~~-------~--~~~~~v~  273 (651)
                      |++.|++++..+..|.||||+|+.+|+.  ++|++|++ |++.+    ..+..+.+++++|+.       .  .+.++++
T Consensus       215 Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~  293 (661)
T PHA02917        215 LINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVK  293 (661)
T ss_pred             HHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCcccccchHHHHHHHhhccccccchHHHHH
Confidence            6666666666556666666666665553  45665543 44433    123334444555542       1  1455566


Q ss_pred             HHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcc
Q psy11819        274 LLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK-AGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAK  352 (651)
Q Consensus       274 ~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (651)
                      .|++.|++       .+.++++++...++.+++++++. .+.++                                    
T Consensus       294 ~Li~~Ga~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------  330 (661)
T PHA02917        294 LFLENGKP-------HGIMCSIVPLWRNDKETISLILKTMNSDV------------------------------------  330 (661)
T ss_pred             HHHhCCCC-------CceeEeeecccccchHHHHHHHHHhchHH------------------------------------
Confidence            66655543       13344555555555555555552 12110                                    


Q ss_pred             cCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHHcCC--HHHHHHHHHcCCCCCCcCcCCC
Q psy11819        353 WGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGH--VEIVDILLKAGANVDVAGLYCW  430 (651)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~--~~~v~~Ll~~~~~~~~~~~~~~  430 (651)
                                                                 -.+++..++..|.  .+++++|++.|++++.++..|.
T Consensus       331 -------------------------------------------~~~~l~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~~g~  367 (661)
T PHA02917        331 -------------------------------------------LQHILIEYMTFGDIDIPLVECMLEYGAVVNKEAIHGY  367 (661)
T ss_pred             -------------------------------------------HHHHHHHHHHcCCCcHHHHHHHHHcCCCCCCCCcccc
Confidence                                                       0122333444554  5588888888888887777777


Q ss_pred             hHHHHHHhcCcHHHHHHHHh-cCCCCCCCCCCCCcHHHHHHHcCc--HHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCc
Q psy11819        431 TPLLVATLGNFTEVVELLLE-YKPNVNALDKDGCTALTIACKDGY--YEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGH  507 (651)
Q Consensus       431 t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~g~t~l~~A~~~~~--~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~  507 (651)
                      ++.    .....++++.|+. .|++++..+.+|.||||.|++.+.  .++..+...+          |...  .+...+.
T Consensus       368 ~~~----~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~----------~~~~--~~~~~~~  431 (661)
T PHA02917        368 FRN----INIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKK----------GLCD--MSYACPI  431 (661)
T ss_pred             chh----hcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhh----------ccch--hhhhhhh
Confidence            643    3456667777776 577766667778888888775543  2222221111          1111  1112235


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHH-cCCHHHHHHHHHcCCC
Q psy11819        508 RGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVK-TRNLEAIQMLIDKKAK  586 (651)
Q Consensus       508 ~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~ga~  586 (651)
                      .+++++|+++|++++.+|..|.||||+|+..++.+++++|++.|++++..|..|+||||+|+. .++.+++++|+++|++
T Consensus       432 ~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~~LL~~ga~  511 (661)
T PHA02917        432 LSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLLCHKPT  511 (661)
T ss_pred             HHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHHHHHHHHHcCCC
Confidence            666777777777777777777777777777777777777777777777777777777777774 5667777777777776


Q ss_pred             Cc
Q psy11819        587 IT  588 (651)
Q Consensus       587 ~~  588 (651)
                      ++
T Consensus       512 i~  513 (661)
T PHA02917        512 LD  513 (661)
T ss_pred             hh
Confidence            65

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=9.1e-52  Score=421.75  Aligned_cols=407  Identities=18%  Similarity=0.175  Sum_probs=332.2

Q ss_pred             cccchHHHHHHhc---CCHHHHHHHHHcCCChhhhhccCCCCchhhHHHHhhHHHHHHhhCHHHHHHHHHcCCCCCCCCC
Q psy11819         78 KERKTAVYTAVEK---GNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRD  154 (651)
Q Consensus        78 ~~~~~~l~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~l~~~~~~~~~~~  154 (651)
                      ..|.||||+|+..   |+.++|++|++.|+++                                            +..+
T Consensus        30 ~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v--------------------------------------------~~~~   65 (661)
T PHA02917         30 QFKNNALHAYLFNEHCNNVEVVKLLLDSGTNP--------------------------------------------LHKN   65 (661)
T ss_pred             CCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCc--------------------------------------------cccC
Confidence            4678999997665   7899999999988765                                            3457


Q ss_pred             CCCCcHHHHHHHcCCHH----HHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHHH
Q psy11819        155 DNGGTALMFAAQKGKLS----FVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWA  230 (651)
Q Consensus       155 ~~~~t~l~~A~~~g~~~----~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A  230 (651)
                      ..|+||||+|+..|+.+    +++.|++.+..++..+  ..++++.|+..|+.|++++|+++|++++..+..|.|||+.|
T Consensus        66 ~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~  143 (661)
T PHA02917         66 WRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNIND--FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENY  143 (661)
T ss_pred             CCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCC--cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHH
Confidence            78999999999999854    5678887654444433  23677888899999999999999999999999999999854


Q ss_pred             H--HcCCHHHHHHHHhcCCCCCCcCC---CC-----------CcHHHHHHh-----------cChHHHHHHHHHcCCCCC
Q psy11819        231 S--YKGHTDTVALLLDKNADVNAHGN---YH-----------ISSLIWAAG-----------RGYTEIVALLVKKGAKVN  283 (651)
Q Consensus       231 ~--~~~~~~~v~~Ll~~~~~~~~~~~---~~-----------~t~L~~a~~-----------~~~~~~v~~L~~~~~~~~  283 (651)
                      +  ..|+.+++++|+++|++++..+.   .|           .||||+|+.           .++.+++++|++.|++++
T Consensus       144 ~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn  223 (661)
T PHA02917        144 VMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPS  223 (661)
T ss_pred             HHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcc
Confidence            3  57899999999999999875542   23           499999975           468999999999999999


Q ss_pred             CCCCCCCCCHHHHHHHcCCH--HHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccch
Q psy11819        284 VGDKVYGTTPLVWACRKGHV--EIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLL  361 (651)
Q Consensus       284 ~~~~~~~~~~l~~a~~~~~~--~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (651)
                      ..+. .|.||||+|+.+|+.  +++++|++ |++.+....                                        
T Consensus       224 ~~d~-~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~----------------------------------------  261 (661)
T PHA02917        224 SIDK-NYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSY----------------------------------------  261 (661)
T ss_pred             cCCC-CCCcHHHHHHHcCCCcHHHHHHHHh-CCccccccc----------------------------------------
Confidence            9887 799999999999985  79999975 776542110                                        


Q ss_pred             hhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHH-------c--CCHHHHHHHHHcCCCCCCcCcCCChH
Q psy11819        362 PKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACR-------K--GHVEIVDILLKAGANVDVAGLYCWTP  432 (651)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~-------~--~~~~~v~~Ll~~~~~~~~~~~~~~t~  432 (651)
                                                   ..+..+.++++.|+.       +  .+.++++.|++.|++      .+.++
T Consensus       262 -----------------------------~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~------~~~~~  306 (661)
T PHA02917        262 -----------------------------IDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKP------HGIMC  306 (661)
T ss_pred             -----------------------------ccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCC------CceeE
Confidence                                         112346677777773       1  278999999999985      34678


Q ss_pred             HHHHHhcCcHHHHHHHHh-cCCCCCCCCCCCCcHHHH---HHHcCc--HHHHHHHHhCCCCCcccCCCCCcHHHHHHhcC
Q psy11819        433 LLVATLGNFTEVVELLLE-YKPNVNALDKDGCTALTI---ACKDGY--YEIAVLLLNSGAYINIQDRSGDSNLIHAVKGG  506 (651)
Q Consensus       433 l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~g~t~l~~---A~~~~~--~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~  506 (651)
                      +++++..+..+++++++. .+.+         ++++.   ++..|.  .+++++|+++|++++.++..|.++.    ...
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~~g~~~~----~~~  373 (661)
T PHA02917        307 SIVPLWRNDKETISLILKTMNSD---------VLQHILIEYMTFGDIDIPLVECMLEYGAVVNKEAIHGYFRN----INI  373 (661)
T ss_pred             eeecccccchHHHHHHHHHhchH---------HHHHHHHHHHHcCCCcHHHHHHHHHcCCCCCCCCccccchh----hcC
Confidence            899999999999999985 3433         35444   444665  5699999999999999999998854    366


Q ss_pred             cHHHHHHHHh-cCCCCCCCCCCCCCHHHHHHHcC-----------------------CHHHHHHHHhcCCCccccCCCCC
Q psy11819        507 HRGIVEALLK-KYVDVDIPGKERKTAVYTAVEKG-----------------------NVPILKLLLTANPDLEIATKDGD  562 (651)
Q Consensus       507 ~~~~v~~Ll~-~~~~~~~~~~~g~t~l~~A~~~~-----------------------~~~~v~~Ll~~~~~~~~~~~~g~  562 (651)
                      +.+++++|+. .|++++..+.+|.||||.|++.+                       ..+++++|+++|+++|.+|..|+
T Consensus       374 ~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~  453 (661)
T PHA02917        374 DSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPYLKDINMIDKRGE  453 (661)
T ss_pred             CHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHCCCCCCCCCCCCc
Confidence            7788888887 58887777788999999987533                       35688999999999999999999


Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH-cCChHHHHHHHhCCCCc
Q psy11819        563 TPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMR-ARSKTIVEVFIRNPKNN  620 (651)
Q Consensus       563 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~-~~~~~~~~~Ll~~~~~~  620 (651)
                      ||||+|+..++.+++++|++.|++++..|..|.||||+|+. .++.+++++|+.+++..
T Consensus       454 TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~~LL~~ga~i  512 (661)
T PHA02917        454 TLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLLCHKPTL  512 (661)
T ss_pred             CHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCh
Confidence            99999999999999999999999999999999999999996 78999999999999874

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=4.4e-50  Score=395.25  Aligned_cols=358  Identities=22%  Similarity=0.258  Sum_probs=226.5

Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH--hCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcCCHHH
Q psy11819        161 LMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAR--EGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDT  238 (651)
Q Consensus       161 l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~--~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~  238 (651)
                      +..++..++.+.++.+++...     ...+.++||.++.  .++.+++++|+++|++++..+..|.||||+|+..|+.++
T Consensus        13 l~~~~~~~n~~~~~~~l~~~~-----~~g~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~ei   87 (446)
T PHA02946         13 LYAKYNSKNLDVFRNMLQAIE-----PSGNYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRI   87 (446)
T ss_pred             HHHHHccCcHHHHHHHHhccC-----CCCCChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHH
Confidence            445555555555555554311     1112455555442  234456666666666666666666666666666666666


Q ss_pred             HHHHHhcCCCCCCcCCCCCcHHHHHHhcC--hHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Q psy11819        239 VALLLDKNADVNAHGNYHISSLIWAAGRG--YTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANV  316 (651)
Q Consensus       239 v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~--~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~  316 (651)
                      +++|+++|++++.++..|.||||+|+..+  ..+++++|+++|++++......|.|||+ |+..++.+++++|++.|+++
T Consensus        88 v~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~  166 (446)
T PHA02946         88 VAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEA  166 (446)
T ss_pred             HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccc
Confidence            66666666666665666666666555443  3556666666666655432224666664 44456666666666666655


Q ss_pred             ccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCC
Q psy11819        317 DVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYG  396 (651)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (651)
                      +..+                                                                         ..|
T Consensus       167 ~~~d-------------------------------------------------------------------------~~G  173 (446)
T PHA02946        167 RIVD-------------------------------------------------------------------------KFG  173 (446)
T ss_pred             cccC-------------------------------------------------------------------------CCC
Confidence            5332                                                                         446


Q ss_pred             ChHHHHHHHcC--CHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcC--cHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q psy11819        397 TTPLVWACRKG--HVEIVDILLKAGANVDVAGLYCWTPLLVATLGN--FTEVVELLLEYKPNVNALDKDGCTALTIACKD  472 (651)
Q Consensus       397 ~t~l~~A~~~~--~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~--~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~  472 (651)
                      .||||.|+..+  +.+++++|++.|++++..+..|.||||+|+..+  +.+++++|++ |++++.++..|.||||+|++.
T Consensus       174 ~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~  252 (446)
T PHA02946        174 KNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKT  252 (446)
T ss_pred             CCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHh
Confidence            66666665533  356777777777777777777777777777654  6677777764 677777777777777777777


Q ss_pred             Cc-HHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy11819        473 GY-YEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN  551 (651)
Q Consensus       473 ~~-~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~  551 (651)
                      ++ .+++++|+++|++++     +. +++.|+..+..++++.+..+|.      ..|.||||+|+.+|+.+++++|+++|
T Consensus       253 ~~~~~~~~~Ll~~g~~~~-----~~-~~~~a~~~~~~~~~e~l~~~g~------~~~~TpLh~Aa~~g~~eivk~Ll~~~  320 (446)
T PHA02946        253 LSPAHLINKLLSTSNVIT-----DQ-TVNICIFYDRDDVLEIINDKGK------QYDSTDFKMAVEVGSIRCVKYLLDND  320 (446)
T ss_pred             CChHHHHHHHHhCCCCCC-----Cc-HHHHHHHcCchHHHHHHHHcCc------ccCCCHHHHHHHcCCHHHHHHHHHCC
Confidence            66 367777777765443     22 3677777777777777776653      23567777777777777777777765


Q ss_pred             CCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCC
Q psy11819        552 PDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK  618 (651)
Q Consensus       552 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~  618 (651)
                      +       .|+||||+|+.+++.++|++|+.+|++++.. ..|.||||+|++.++.++++.|+.+.+
T Consensus       321 ~-------~~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~~-~~G~t~l~~a~~~~~~~~~~~ll~~~~  379 (446)
T PHA02946        321 I-------ICEDAMYYAVLSEYETMVDYLLFNHFSVDSV-VNGHTCMSECVRLNNPVILSKLMLHNP  379 (446)
T ss_pred             C-------ccccHHHHHHHhCHHHHHHHHHHCCCCCCCc-cccccHHHHHHHcCCHHHHHHHHhcCc
Confidence            3       3567777777777777777777777777764 467777777777777777777776543

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=7.4e-50  Score=394.41  Aligned_cols=410  Identities=15%  Similarity=0.183  Sum_probs=320.0

Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcC---CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhC--CHHHHHHHHH
Q psy11819        137 DSLQTFLENKRTVADDRDDNGGTALMFAAQKG---KLSFVRELVTRGADVNAEDNDNWSPLTYAAREG--YTDVCAELLD  211 (651)
Q Consensus       137 ~~v~~~l~~~~~~~~~~~~~~~t~l~~A~~~g---~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g--~~~iv~~Ll~  211 (651)
                      ..++..++.........|..|+||||+|+..|   +.++|++|++.|++++.+|..|.||||+|+..+  +.|++++|++
T Consensus        21 ~~~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~  100 (672)
T PHA02730         21 KKIKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLIS  100 (672)
T ss_pred             HHHHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHh
Confidence            33455555543443578889999999999997   599999999999999999999999999999977  7999999999


Q ss_pred             cCCC--CCCCCCCCchHHHHHHH--cCCHHHHHHHHh-cCCCCCCcC-----CCCCcHHHHHHhcChHHHHHHHHHcCCC
Q psy11819        212 HGAD--LEHRDMGGWSPLMWASY--KGHTDTVALLLD-KNADVNAHG-----NYHISSLIWAAGRGYTEIVALLVKKGAK  281 (651)
Q Consensus       212 ~~~~--~~~~~~~~~t~L~~A~~--~~~~~~v~~Ll~-~~~~~~~~~-----~~~~t~L~~a~~~~~~~~v~~L~~~~~~  281 (651)
                      .|++  ++..+..+.+||+.++.  +++.+++++|++ .+++++...     ..|.+++++++..++.++|++|+++|++
T Consensus       101 ~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~  180 (672)
T PHA02730        101 SYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECY  180 (672)
T ss_pred             cCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCc
Confidence            9654  46666668899999888  889999999996 677877663     3788999999999999999999999999


Q ss_pred             CC-------CCCCCCCCCHHHHHH------HcCCHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhc
Q psy11819        282 VN-------VGDKVYGTTPLVWAC------RKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVG  348 (651)
Q Consensus       282 ~~-------~~~~~~~~~~l~~a~------~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (651)
                      ++       ..+.....+.|++.+      .+++.+++++|+++|++++..+                            
T Consensus       181 v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd----------------------------  232 (672)
T PHA02730        181 STGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRD----------------------------  232 (672)
T ss_pred             ccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCC----------------------------
Confidence            84       122222335555433      4568999999999999988654                            


Q ss_pred             hhcccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCChHHHH--HHHcCCHHHHHHHHHcCCCCCCc-
Q psy11819        349 LYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVW--ACRKGHVEIVDILLKAGANVDVA-  425 (651)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~--A~~~~~~~~v~~Ll~~~~~~~~~-  425 (651)
                                                                   ..|.||||.  +...++.|++++|++...+-... 
T Consensus       233 ---------------------------------------------~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~  267 (672)
T PHA02730        233 ---------------------------------------------EGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYD  267 (672)
T ss_pred             ---------------------------------------------CCCCCHHHHHHHcCcccHHHHHHHHhccccccccc
Confidence                                                         668899985  55567799999999832221111 


Q ss_pred             CcCCC---hHHHHHH--------hcCcHHHHHHHHhcCCC-------CCCCCCCCCc---------------------HH
Q psy11819        426 GLYCW---TPLLVAT--------LGNFTEVVELLLEYKPN-------VNALDKDGCT---------------------AL  466 (651)
Q Consensus       426 ~~~~~---t~l~~a~--------~~~~~~~~~~Ll~~~~~-------~~~~~~~g~t---------------------~l  466 (651)
                      |..+.   -.|+--.        ..-..++|+.|++.+..       +...+..|.+                     .|
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l  347 (672)
T PHA02730        268 DISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAML  347 (672)
T ss_pred             cccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHH
Confidence            11100   0111000        01134677888875432       1123444443                     56


Q ss_pred             HHHHHcC---cHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCc----HHHHHHHHhcCC--CCCCCCCCCCCHHHH---
Q psy11819        467 TIACKDG---YYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGH----RGIVEALLKKYV--DVDIPGKERKTAVYT---  534 (651)
Q Consensus       467 ~~A~~~~---~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~----~~~v~~Ll~~~~--~~~~~~~~g~t~l~~---  534 (651)
                      +.-.+.+   +.+++++|+++|++++.. ..|.||||+|+..++    .+++++|+++|+  +++..+..|.||||.   
T Consensus       348 ~~Y~~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~  426 (672)
T PHA02730        348 INYLHYGDMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLIL  426 (672)
T ss_pred             HHHHhcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHH
Confidence            6666655   589999999999999985 789999999888775    899999999987  688889999999984   


Q ss_pred             HHHcC---------CHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCcHHHHHHH-
Q psy11819        535 AVEKG---------NVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDK-RGDTVLHIAMR-  603 (651)
Q Consensus       535 A~~~~---------~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~t~l~~A~~-  603 (651)
                      |...+         ..+++++|+++|+++|.+|..|+||||+|+..++.+++++|+++||+++..|. .|.||||+|+. 
T Consensus       427 a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~  506 (672)
T PHA02730        427 SRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYR  506 (672)
T ss_pred             HHhccccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHh
Confidence            33222         23679999999999999999999999999999999999999999999999997 59999999987 


Q ss_pred             -cCChHHHHHHHhCCCCc
Q psy11819        604 -ARSKTIVEVFIRNPKNN  620 (651)
Q Consensus       604 -~~~~~~~~~Ll~~~~~~  620 (651)
                       .++.+++++|+++++..
T Consensus       507 ~~~~~eIv~~LLs~ga~i  524 (672)
T PHA02730        507 RENKTKLVDLLLSYHPTL  524 (672)
T ss_pred             hcCcHHHHHHHHHcCCCH
Confidence             47899999999999763

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=3e-49  Score=389.33  Aligned_cols=358  Identities=21%  Similarity=0.272  Sum_probs=315.4

Q ss_pred             HHHHHHhhCHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHH--cCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHH
Q psy11819        127 LQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQ--KGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTD  204 (651)
Q Consensus       127 l~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~t~l~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~  204 (651)
                      +..++..++.+.++.++.....      ..+.++||.++.  .++.++|++|++.|++++.+|..|.||||+|+..|+.+
T Consensus        13 l~~~~~~~n~~~~~~~l~~~~~------~g~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~e   86 (446)
T PHA02946         13 LYAKYNSKNLDVFRNMLQAIEP------SGNYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNR   86 (446)
T ss_pred             HHHHHccCcHHHHHHHHhccCC------CCCChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHH
Confidence            4566778889999988865321      123689998764  44689999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCCCCCCCchHHHHHHHcC--CHHHHHHHHhcCCCCCC-cCCCCCcHHHHHHhcChHHHHHHHHHcCCC
Q psy11819        205 VCAELLDHGADLEHRDMGGWSPLMWASYKG--HTDTVALLLDKNADVNA-HGNYHISSLIWAAGRGYTEIVALLVKKGAK  281 (651)
Q Consensus       205 iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~--~~~~v~~Ll~~~~~~~~-~~~~~~t~L~~a~~~~~~~~v~~L~~~~~~  281 (651)
                      ++++|+++|++++.++..|.||||+|+..+  ..+++++|+++|++++. .+..+.|||+ |+..++.+++++|++.|.+
T Consensus        87 iv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad  165 (446)
T PHA02946         87 IVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFE  165 (446)
T ss_pred             HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhcccc
Confidence            999999999999999999999999998866  48999999999999995 6888999997 6777999999999999999


Q ss_pred             CCCCCCCCCCCHHHHHHHcCC--HHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCccc
Q psy11819        282 VNVGDKVYGTTPLVWACRKGH--VEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSF  359 (651)
Q Consensus       282 ~~~~~~~~~~~~l~~a~~~~~--~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (651)
                      ++..+. .|+||||+|+..++  .+++++|++.|++++..+                                       
T Consensus       166 ~~~~d~-~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d---------------------------------------  205 (446)
T PHA02946        166 ARIVDK-FGKNHIHRHLMSDNPKASTISWMMKLGISPSKPD---------------------------------------  205 (446)
T ss_pred             ccccCC-CCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccC---------------------------------------
Confidence            998888 79999999987654  689999999999987543                                       


Q ss_pred             chhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHHcC--CHHHHHHHHHcCCCCCCcCcCCChHHHHHH
Q psy11819        360 LLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKG--HVEIVDILLKAGANVDVAGLYCWTPLLVAT  437 (651)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~--~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~  437 (651)
                                                        ..|.||||.|+..+  +.+++++|++ |++++.++..|.||||+|+
T Consensus       206 ----------------------------------~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~  250 (446)
T PHA02946        206 ----------------------------------HDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLI  250 (446)
T ss_pred             ----------------------------------CCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHH
Confidence                                              56899999999986  8899999985 8999999999999999999


Q ss_pred             hcCc-HHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHh
Q psy11819        438 LGNF-TEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLK  516 (651)
Q Consensus       438 ~~~~-~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~  516 (651)
                      ..++ .+++++|+++|...+     +. .++.|+..+..++++++.++|.      ..|.||||+|+..|+.+++++|++
T Consensus       251 ~~~~~~~~~~~Ll~~g~~~~-----~~-~~~~a~~~~~~~~~e~l~~~g~------~~~~TpLh~Aa~~g~~eivk~Ll~  318 (446)
T PHA02946        251 KTLSPAHLINKLLSTSNVIT-----DQ-TVNICIFYDRDDVLEIINDKGK------QYDSTDFKMAVEVGSIRCVKYLLD  318 (446)
T ss_pred             HhCChHHHHHHHHhCCCCCC-----Cc-HHHHHHHcCchHHHHHHHHcCc------ccCCCHHHHHHHcCCHHHHHHHHH
Confidence            9887 589999999986543     33 4899999999999999998875      347899999999999999999999


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy11819        517 KYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAK  586 (651)
Q Consensus       517 ~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  586 (651)
                      +|.       +|.||||+|+..++.+++++|+.+|+++|.. .+|.||||+|+..++.++++.|+.+..+
T Consensus       319 ~~~-------~~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~~-~~G~t~l~~a~~~~~~~~~~~ll~~~~~  380 (446)
T PHA02946        319 NDI-------ICEDAMYYAVLSEYETMVDYLLFNHFSVDSV-VNGHTCMSECVRLNNPVILSKLMLHNPT  380 (446)
T ss_pred             CCC-------ccccHHHHHHHhCHHHHHHHHHHCCCCCCCc-cccccHHHHHHHcCCHHHHHHHHhcCcc
Confidence            864       5689999999999999999999999999985 6899999999999999999999996444

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.1e-48  Score=386.20  Aligned_cols=198  Identities=18%  Similarity=0.168  Sum_probs=136.1

Q ss_pred             ccCCccCCCCCchHHHHhhcC---cHHHHHHHHhhcCCccCCCCccchhhhhhhhccCCchHHHHHHHhhCCCCCccccc
Q psy11819          5 DVSSKRDRSGDSNLIHAVKGG---HRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSLKERK   81 (651)
Q Consensus         5 ~~~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll~~g~~~~~~~~~~~~~~~l~~A~~~~~~~i~~~Ll~~~~~~~~~~~~   81 (651)
                      ++.+.+|.+|+||||+|+..|   +.++|++|+++||+++..+                                 ..|.
T Consensus        32 ~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD---------------------------------~~G~   78 (672)
T PHA02730         32 NLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRN---------------------------------NEGL   78 (672)
T ss_pred             chhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccC---------------------------------CCCC
Confidence            455678899999999999987   5999999999999987544                                 3677


Q ss_pred             hHHHHHHhcC--CHHHHHHHHHcCCChhhhhccCCCCchhhHHHHhhHHHHHHhhCHHHHHHHHHcCCCCCCCCCCCCCc
Q psy11819         82 TAVYTAVEKG--NVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGT  159 (651)
Q Consensus        82 ~~l~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~t  159 (651)
                      ||||.|+..|  +.|+|++|+++|++...                                          +..+.-+.+
T Consensus        79 TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~------------------------------------------~~~~~~~d~  116 (672)
T PHA02730         79 TPLGVYSKRKYVKSQIVHLLISSYSNASN------------------------------------------ELTSNINDF  116 (672)
T ss_pred             ChHHHHHHcCCCcHHHHHHHHhcCCCCCc------------------------------------------ccccccCCc
Confidence            8888877766  68888888877654321                                          223444566


Q ss_pred             HHHHHHH--cCCHHHHHHHHH-cCCCCcccCC-----CCCCHHHHHHHhCCHHHHHHHHHcCCCCC-------CCCCCCc
Q psy11819        160 ALMFAAQ--KGKLSFVRELVT-RGADVNAEDN-----DNWSPLTYAAREGYTDVCAELLDHGADLE-------HRDMGGW  224 (651)
Q Consensus       160 ~l~~A~~--~g~~~~v~~Ll~-~~~~~~~~~~-----~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~-------~~~~~~~  224 (651)
                      ||+.++.  .++.++|++|++ .+++++....     .|.+|+++|+..++.|+|++|+++|++++       ..+....
T Consensus       117 ~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c  196 (672)
T PHA02730        117 DLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRC  196 (672)
T ss_pred             hHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCcc
Confidence            7776666  667777777775 5556555422     56777777777777777777777777764       1222233


Q ss_pred             -hHHHHH------HHcCCHHHHHHHHhcCCCCCCcCCCCCcHHHH--HHhcChHHHHHHHHH
Q psy11819        225 -SPLMWA------SYKGHTDTVALLLDKNADVNAHGNYHISSLIW--AAGRGYTEIVALLVK  277 (651)
Q Consensus       225 -t~L~~A------~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~--a~~~~~~~~v~~L~~  277 (651)
                       |.||++      ..+++.|++++|+++|++++.++..|.||||+  +...++.|++++|++
T Consensus       197 ~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~  258 (672)
T PHA02730        197 KNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIK  258 (672)
T ss_pred             chhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHh
Confidence             344433      23456777777777777777777777777774  444566777777776

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=1.4e-48  Score=393.66  Aligned_cols=407  Identities=15%  Similarity=0.181  Sum_probs=323.9

Q ss_pred             HHhhHHHHHHhhCHHHHHHHHHcCCCCCCCCCCCCCcHHHHH-----HHcCCHHHHHHHHHcC-CCCccc-CCCCCCHHH
Q psy11819        123 CYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFA-----AQKGKLSFVRELVTRG-ADVNAE-DNDNWSPLT  195 (651)
Q Consensus       123 ~~~~l~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~t~l~~A-----~~~g~~~~v~~Ll~~~-~~~~~~-~~~~~t~L~  195 (651)
                      ..+...+.++.++.+..+..+...       +..+..+++..     .+.++.++|++|++.| ++++.. +..|.||||
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~d~~~~~~y~~al~~~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH  182 (764)
T PHA02716        110 YKQFYKQIIKDNKSKTANHVFDIP-------NNGDMDILYTYFNSPNTRGIDLDLIKYMVDVGIVNLNYVCKKTGYGILH  182 (764)
T ss_pred             HHHHHHHHHHcCCchhhhhhhcCC-------CcccchHHHHHHhhhcccCCCHHHHHHHHHCCCCCcccccCCCCCcHHH
Confidence            344455566666666665554333       22233333332     3468999999999999 999988 889999999


Q ss_pred             HHHH--hCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcCC--HHHHHHHHhcCCCCCCcCCCCCcHHHHHH---hcCh
Q psy11819        196 YAAR--EGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGH--TDTVALLLDKNADVNAHGNYHISSLIWAA---GRGY  268 (651)
Q Consensus       196 ~A~~--~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~--~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~---~~~~  268 (651)
                      +|+.  .++.+++++|+++|++++..+..|.||||+|+..|+  .+++++|+++|++++.++..|.||||.|+   ..++
T Consensus       183 ~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~  262 (764)
T PHA02716        183 AYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNIN  262 (764)
T ss_pred             HHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccC
Confidence            9865  467899999999999999999999999999999995  48999999999999999999999999875   5678


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCCCCHHH---HHHHcCCHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcc
Q psy11819        269 TEIVALLVKKGAKVNVGDKVYGTTPLV---WACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPL  345 (651)
Q Consensus       269 ~~~v~~L~~~~~~~~~~~~~~~~~~l~---~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (651)
                      .++++.+++.+......   ....+++   .|+..|+.+++++|+++|++++..+                         
T Consensus       263 ~EIvkiLie~~d~n~~~---~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD-------------------------  314 (764)
T PHA02716        263 PEITNIYIESLDGNKVK---NIPMILHSYITLARNIDISVVYSFLQPGVKLHYKD-------------------------  314 (764)
T ss_pred             HHHHHHHHHhccccccc---cchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccC-------------------------
Confidence            99999998864332211   1122333   4788999999999999999877543                         


Q ss_pred             hhchhcccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHH--cCCHHHHHHHHHcCCCCC
Q psy11819        346 TVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACR--KGHVEIVDILLKAGANVD  423 (651)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~--~~~~~~v~~Ll~~~~~~~  423 (651)
                                                                      ..|+||||.|+.  .++.+++++|+++|++++
T Consensus       315 ------------------------------------------------~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN  346 (764)
T PHA02716        315 ------------------------------------------------SAGRTCLHQYILRHNISTDIIKLLHEYGNDLN  346 (764)
T ss_pred             ------------------------------------------------CCCCCHHHHHHHHhCCCchHHHHHHHcCCCCc
Confidence                                                            668999998764  468899999999999999


Q ss_pred             CcCcCCChHHHHHHh--------------cCcHHHHHHHHhcCCCCCCCCCCCCcHHHH----HHHcCcHHHHHHHHhCC
Q psy11819        424 VAGLYCWTPLLVATL--------------GNFTEVVELLLEYKPNVNALDKDGCTALTI----ACKDGYYEIAVLLLNSG  485 (651)
Q Consensus       424 ~~~~~~~t~l~~a~~--------------~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~----A~~~~~~~~~~~Ll~~g  485 (651)
                      .++..|+||||.|+.              .++.+++++|+++|++++.++..|.||||.    |...++.+++++|++.|
T Consensus       347 ~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~  426 (764)
T PHA02716        347 EPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDK  426 (764)
T ss_pred             cCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCc
Confidence            999999999998864              367899999999999999999999999993    33457789999999987


Q ss_pred             CCCcccC--------CCCCcH--HHHHHhcCcH------------------HHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Q psy11819        486 AYINIQD--------RSGDSN--LIHAVKGGHR------------------GIVEALLKKYVDVDIPGKERKTAVYTAVE  537 (651)
Q Consensus       486 ~~~~~~~--------~~~~t~--l~~A~~~~~~------------------~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~  537 (651)
                      +.....+        ..+.+|  +|.++..+..                  +++.+++..+.+++..|..|+||||+|+.
T Consensus       427 ~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~  506 (764)
T PHA02716        427 VLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSII  506 (764)
T ss_pred             chhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHH
Confidence            6543222        122233  4445543332                  33444455567788889999999999999


Q ss_pred             cCCH-----HHHHHHHhcCCCccccCCCCCcHHHHHHHcCCH-----HHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCh
Q psy11819        538 KGNV-----PILKLLLTANPDLEIATKDGDTPLLKAVKTRNL-----EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSK  607 (651)
Q Consensus       538 ~~~~-----~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~-----~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~  607 (651)
                      .|+.     +++++|++.|+++|.+|++|+||||+|+++|+.     ++|+.|+++|++++..      .|++|...++.
T Consensus       507 ~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~~~------~l~~~~~~~~~  580 (764)
T PHA02716        507 SHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVDIV------IIFLDKCYANG  580 (764)
T ss_pred             cCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcchH------HHHHHhhhhhh
Confidence            8876     556999999999999999999999999999976     9999999999998865      48999999999


Q ss_pred             HHHHHHHhCCC
Q psy11819        608 TIVEVFIRNPK  618 (651)
Q Consensus       608 ~~~~~Ll~~~~  618 (651)
                      +++..|..+++
T Consensus       581 ~~~~ll~~~~~  591 (764)
T PHA02716        581 KFPSLLLSEDD  591 (764)
T ss_pred             HHHHHHHHcch
Confidence            99999998876

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=7.8e-47  Score=381.07  Aligned_cols=367  Identities=19%  Similarity=0.192  Sum_probs=299.9

Q ss_pred             HhCCHHHHHHHHHcC-CCCCCC-CCCCchHHHHHHHc--CCHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcCh--HHHH
Q psy11819        199 REGYTDVCAELLDHG-ADLEHR-DMGGWSPLMWASYK--GHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGY--TEIV  272 (651)
Q Consensus       199 ~~g~~~iv~~Ll~~~-~~~~~~-~~~~~t~L~~A~~~--~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~--~~~v  272 (651)
                      +.++.+++++|++.| ++++.. +..|.||||.|+..  ++.+++++|+++|++++..+..|.||||+|+..|+  .+++
T Consensus       151 ~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIV  230 (764)
T PHA02716        151 RGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVI  230 (764)
T ss_pred             cCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHH
Confidence            468899999999999 999988 88999999998654  67899999999999999999999999999999995  5999


Q ss_pred             HHHHHcCCCCCCCCCCCCCCHHHHHH---HcCCHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhch
Q psy11819        273 ALLVKKGAKVNVGDKVYGTTPLVWAC---RKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGL  349 (651)
Q Consensus       273 ~~L~~~~~~~~~~~~~~~~~~l~~a~---~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (651)
                      ++|++.|++++..+. .|+|||++|+   ..++.++++.|++.+..-....    .                        
T Consensus       231 klLLe~GADVN~kD~-~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~----~------------------------  281 (764)
T PHA02716        231 KKIIELGGDMDMKCV-NGMSPIMTYIINIDNINPEITNIYIESLDGNKVKN----I------------------------  281 (764)
T ss_pred             HHHHHcCCCCCCCCC-CCCCHHHHHHHhhhccCHHHHHHHHHhcccccccc----c------------------------
Confidence            999999999999887 7999999886   4678999999988532211000    0                        


Q ss_pred             hcccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCC
Q psy11819        350 YAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYC  429 (651)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~  429 (651)
                                                                  ......+..|+..|+.+++++|++.|++++.++..|
T Consensus       282 --------------------------------------------~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G  317 (764)
T PHA02716        282 --------------------------------------------PMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAG  317 (764)
T ss_pred             --------------------------------------------hhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCC
Confidence                                                        000012345789999999999999999999999999


Q ss_pred             ChHHHHHHh--cCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH--------------cCcHHHHHHHHhCCCCCcccCC
Q psy11819        430 WTPLLVATL--GNFTEVVELLLEYKPNVNALDKDGCTALTIACK--------------DGYYEIAVLLLNSGAYINIQDR  493 (651)
Q Consensus       430 ~t~l~~a~~--~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~--------------~~~~~~~~~Ll~~g~~~~~~~~  493 (651)
                      +||||+|+.  .++.+++++|+++|++++.+|..|.||||.|+.              .++.+++++|+++|++++.++.
T Consensus       318 ~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~  397 (764)
T PHA02716        318 RTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNC  397 (764)
T ss_pred             CCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCC
Confidence            999999764  457899999999999999999999999999875              3688999999999999999999


Q ss_pred             CCCcHHHH----HHhcCcHHHHHHHHhcCCCCCCCC--------CCCCC--HHHHHHHcCCHH-----------------
Q psy11819        494 SGDSNLIH----AVKGGHRGIVEALLKKYVDVDIPG--------KERKT--AVYTAVEKGNVP-----------------  542 (651)
Q Consensus       494 ~~~t~l~~----A~~~~~~~~v~~Ll~~~~~~~~~~--------~~g~t--~l~~A~~~~~~~-----------------  542 (651)
                      .|.||||.    |...++.+++++|++.+......+        ..+.+  .+|.++..++.+                 
T Consensus       398 ~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~  477 (764)
T PHA02716        398 LGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIH  477 (764)
T ss_pred             CCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccc
Confidence            99999993    344678999999999875432211        12223  355565544332                 


Q ss_pred             -HHHHHHhcCCCccccCCCCCcHHHHHHHcCCH-----HHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCh-----HHHH
Q psy11819        543 -ILKLLLTANPDLEIATKDGDTPLLKAVKTRNL-----EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSK-----TIVE  611 (651)
Q Consensus       543 -~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~-----~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~-----~~~~  611 (651)
                       ++..++..+.++|..|..|+||||+|+.+|+.     +++++|++.|++++.+|+.|.||||+|+++|+.     ++++
T Consensus       478 ~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk  557 (764)
T PHA02716        478 DVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNRLSGHQWYIVK  557 (764)
T ss_pred             hhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCccccHHHHHH
Confidence             33445556677889999999999999999876     456999999999999999999999999999977     9999


Q ss_pred             HHHhCCCCcccccCCCCCCCCcccccccccchhhhh
Q psy11819        612 VFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQ  647 (651)
Q Consensus       612 ~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~  647 (651)
                      .|+++++...   +.      .+++|...++..++.
T Consensus       558 ~LL~~ga~~~---~~------~l~~~~~~~~~~~~~  584 (764)
T PHA02716        558 NILDKRPNVD---IV------IIFLDKCYANGKFPS  584 (764)
T ss_pred             HHHhcCCCcc---hH------HHHHHhhhhhhHHHH
Confidence            9999998732   22      477777666655443

>KOG0510|consensus

Probab=100.00  E-value=1e-46  Score=361.88  Aligned_cols=380  Identities=29%  Similarity=0.342  Sum_probs=314.7

Q ss_pred             HHHHHHhhCHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHH
Q psy11819        127 LQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVC  206 (651)
Q Consensus       127 l~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv  206 (651)
                      +...+..+..+-...++..........+..|.+++|.|+..+..      +..-......|..+.+|||+|+.....+.|
T Consensus        31 ~~~~~~~~~~dD~~tli~~kns~~~~~~~~gd~~~~~~~~~~y~------~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i  104 (929)
T KOG0510|consen   31 LDSQALADTLDDRHTLILEKNSSTPGKRAFGDTELHHASARNYI------LSKLAISYAKDSADNTPLHAAVEYNQGDKI  104 (929)
T ss_pred             HhHHHHHhhHHHHHHHHHHhccccchhhhhchhHHHHHHhhcch------hhhhhhhhhhhcccCchhHHHhhcchHHHH
Confidence            44445555566666677777777777888999999999988766      333334566788899999999999999999


Q ss_pred             HHHHHcCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHHHHHHHHcCCCCCCCC
Q psy11819        207 AELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGD  286 (651)
Q Consensus       207 ~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~v~~L~~~~~~~~~~~  286 (651)
                      ++|++.|++++..+..+.+|+|+|+..|..++++.|+++|++++..+..+.||||.|+..++.|..+.|++.|+++...+
T Consensus       105 ~~Lls~gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~  184 (929)
T KOG0510|consen  105 QVLLSYGADTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSD  184 (929)
T ss_pred             HHHHhcCCCCChhhhhccCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999998899999999998888


Q ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHH
Q psy11819        287 KVYGTTPLVWACRKGHVEIVDILLKA-GANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLK  365 (651)
Q Consensus       287 ~~~~~~~l~~a~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (651)
                      . ++.+|+|.|+.+|..++.+..+.. |..-.                                                
T Consensus       185 ~-~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~------------------------------------------------  215 (929)
T KOG0510|consen  185 I-DGNFPIHEAARSGSKECMEIFLPEHGYERQ------------------------------------------------  215 (929)
T ss_pred             C-cCCchHHHHHHhcchhhhhhhhccccchhh------------------------------------------------
Confidence            7 799999999999999999998872 11100                                                


Q ss_pred             HHHHHHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHH
Q psy11819        366 EEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVV  445 (651)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~  445 (651)
                                           ..++..+..+.+|||.|+..|+++.++..++.|........            +.-+-.
T Consensus       216 ---------------------~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~------------~~~~q~  262 (929)
T KOG0510|consen  216 ---------------------THINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQL------------DAMQQE  262 (929)
T ss_pred             ---------------------cccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhh------------HHHHHH
Confidence                                 00122346789999999999999999999988754421110            112223


Q ss_pred             HHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHh-cC-CCCCC
Q psy11819        446 ELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLK-KY-VDVDI  523 (651)
Q Consensus       446 ~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~-~~-~~~~~  523 (651)
                      +.|      ++..|++|.||||+|++.|+++.++.|+..|++++.++.++.||||.|+.+|+.+.++.|++ .+ ...+.
T Consensus       263 kel------v~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne  336 (929)
T KOG0510|consen  263 KEL------VNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNE  336 (929)
T ss_pred             HHH------hhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCcccccc
Confidence            333      34468899999999999999999999999999999999999999999999999999999998 33 34566


Q ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcc---ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHH
Q psy11819        524 PGKERKTAVYTAVEKGNVPILKLLLTANPDLE---IATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHI  600 (651)
Q Consensus       524 ~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~  600 (651)
                      .|-.|.||||.|+++|+.++++.|+..|+...   ..|++|.||||.|++.|+..+|++|+.+||++...|+.|.+++++
T Consensus       337 ~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  337 SDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFDT  416 (929)
T ss_pred             ccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccccccc
Confidence            77889999999999999999999999999766   458999999999999999999999999999999999999998884

>KOG0510|consensus

Probab=100.00  E-value=1e-45  Score=354.98  Aligned_cols=396  Identities=23%  Similarity=0.253  Sum_probs=326.1

Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC
Q psy11819        137 DSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADL  216 (651)
Q Consensus       137 ~~v~~~l~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~  216 (651)
                      +..+.-+..-+..++.....-.++.+.+...   +.+..+++........+..|.+++|.|+..++.      ++.-...
T Consensus        11 ~~~qea~~~~~~~~~~~~~d~~~~~~~~~~d---D~~tli~~kns~~~~~~~~gd~~~~~~~~~~y~------~~~~~~~   81 (929)
T KOG0510|consen   11 PQAQEALLLAKQDIRQPVADLDSQALADTLD---DRHTLILEKNSSTPGKRAFGDTELHHASARNYI------LSKLAIS   81 (929)
T ss_pred             cHHHHHhhhhhhhhhhhhHHHhHHHHHhhHH---HHHHHHHHhccccchhhhhchhHHHHHHhhcch------hhhhhhh
Confidence            3344444444444444444444555554443   778888887777777888899999999988766      3333344


Q ss_pred             CCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q psy11819        217 EHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVW  296 (651)
Q Consensus       217 ~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~  296 (651)
                      ...|..+.+|||.|+.....+.+++|++.|+++...+..+.+|+|+|+..++.+.++.|++++.+++..+. .+.||||.
T Consensus        82 ~a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de-~~~TpLh~  160 (929)
T KOG0510|consen   82 YAKDSADNTPLHAAVEYNQGDKIQVLLSYGADTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLEDE-NGFTPLHL  160 (929)
T ss_pred             hhhhcccCchhHHHhhcchHHHHHHHHhcCCCCChhhhhccCchhhccccchHHHHHHHHHhcCCcccccc-CCCchhhH
Confidence            55677788999999999999999999999999999999889999999999999999999999999888888 78899999


Q ss_pred             HHHcCCHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCC
Q psy11819        297 ACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGV  376 (651)
Q Consensus       297 a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (651)
                      |+..++.+..+.|++.|+++...+                                                        
T Consensus       161 A~~~~~~E~~k~Li~~~a~~~K~~--------------------------------------------------------  184 (929)
T KOG0510|consen  161 AARKNKVEAKKELINKGADPCKSD--------------------------------------------------------  184 (929)
T ss_pred             HHhcChHHHHHHHHhcCCCCCccc--------------------------------------------------------
Confidence            999999898888888888876543                                                        


Q ss_pred             CCccchhhhHHHHHhhcCCCChHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhc
Q psy11819        377 DPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLK-----AGANVDVAGLYCWTPLLVATLGNFTEVVELLLEY  451 (651)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~-----~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~  451 (651)
                                       ..|..|+|.|+.+|..+.++..+.     ++..++..+..+.+|||.|+..|+.++++.+++.
T Consensus       185 -----------------~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n  247 (929)
T KOG0510|consen  185 -----------------IDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQN  247 (929)
T ss_pred             -----------------CcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhC
Confidence                             457788999999999999988887     6677888888888888888888888888888887


Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCH
Q psy11819        452 KPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTA  531 (651)
Q Consensus       452 ~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~  531 (651)
                      |......            +.+.....+.|+      +..|.+|.||||+|++.|+.+.++.|+..|++++.++.++.||
T Consensus       248 ~~~~a~~------------~~~~~~q~kelv------~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~sp  309 (929)
T KOG0510|consen  248 GKKIADV------------QLDAMQQEKELV------NDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESP  309 (929)
T ss_pred             ccccchh------------hhHHHHHHHHHh------hcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCc
Confidence            7543211            111122333332      6778999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHh-cCC-CccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc---ccCCCCCcHHHHHHHcCC
Q psy11819        532 VYTAVEKGNVPILKLLLT-ANP-DLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT---AVDKRGDTVLHIAMRARS  606 (651)
Q Consensus       532 l~~A~~~~~~~~v~~Ll~-~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~d~~g~t~l~~A~~~~~  606 (651)
                      ||.||..|+.+.++.|++ .|. ..|..|..|+||||.|+++|+.++++.|+++||...   ..|++|.||||.|++.|+
T Consensus       310 LH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~  389 (929)
T KOG0510|consen  310 LHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGN  389 (929)
T ss_pred             hHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhcc
Confidence            999999999999999999 443 377888999999999999999999999999999877   569999999999999999


Q ss_pred             hHHHHHHHhCCCCcccccCCCCCCCCcccc
Q psy11819        607 KTIVEVFIRNPKNNILLYRPNKAGETPYSI  636 (651)
Q Consensus       607 ~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~  636 (651)
                      ..+|++|+.+|++   +..+|+.|.++|++
T Consensus       390 ~~av~~Li~~Ga~---I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  390 TSAVQKLISHGAD---IGVKNKKGKSAFDT  416 (929)
T ss_pred             HHHHHHHHHcCCc---eeeccccccccccc
Confidence            9999999999999   88899999999995

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=6.5e-44  Score=356.70  Aligned_cols=337  Identities=23%  Similarity=0.340  Sum_probs=255.7

Q ss_pred             HHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcCCHHH
Q psy11819        160 ALMFAAQKGKLSFVRELVTRG-ADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDT  238 (651)
Q Consensus       160 ~l~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~  238 (651)
                      .|..|+..|+++.|+.|++.+ ..++..+..|.||||.|+..|+.+++++|++.|++++..+..|.|||+.|+..|+.++
T Consensus         4 ~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~i   83 (434)
T PHA02874          4 DLRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDI   83 (434)
T ss_pred             HHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence            678888889999998888754 4466777788889999888888889998888888888888888888888888888888


Q ss_pred             HHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Q psy11819        239 VALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDV  318 (651)
Q Consensus       239 v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~  318 (651)
                      +++|+++|+++...          +                                  ....+.+++++|++.|++++.
T Consensus        84 v~~Ll~~g~~~~~~----------~----------------------------------~~~~~~~~i~~ll~~g~d~n~  119 (434)
T PHA02874         84 IKLLIDNGVDTSIL----------P----------------------------------IPCIEKDMIKTILDCGIDVNI  119 (434)
T ss_pred             HHHHHHCCCCCCcc----------h----------------------------------hccCCHHHHHHHHHCcCCCCC
Confidence            88888887765321          0                                  011234666777777666554


Q ss_pred             ccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCCh
Q psy11819        319 AGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTT  398 (651)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t  398 (651)
                      .+                                                                         ..|.|
T Consensus       120 ~~-------------------------------------------------------------------------~~g~T  126 (434)
T PHA02874        120 KD-------------------------------------------------------------------------AELKT  126 (434)
T ss_pred             CC-------------------------------------------------------------------------CCCcc
Confidence            32                                                                         44667


Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHH
Q psy11819        399 PLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIA  478 (651)
Q Consensus       399 ~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~  478 (651)
                      |||.|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..|+.+++
T Consensus       127 ~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv  206 (434)
T PHA02874        127 FLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACI  206 (434)
T ss_pred             HHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence            77777777777777777777777777777788888888888888888888888888877788888888888888888888


Q ss_pred             HHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHhcCCCcccc
Q psy11819        479 VLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKG-NVPILKLLLTANPDLEIA  557 (651)
Q Consensus       479 ~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~-~~~~v~~Ll~~~~~~~~~  557 (651)
                      ++|+++|++++..+..|.||||.|+..+. +++++|+ .|.+++.++.+|.||||+|+..+ +.+++++|+++|++++.+
T Consensus       207 ~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~  284 (434)
T PHA02874        207 KLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIK  284 (434)
T ss_pred             HHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCC
Confidence            88888888888888888888888887765 4556655 46777888888888888888765 678888888888888888


Q ss_pred             CCCCCcHHHHHHHcC-CHHHHHHHHHcCCCCcccCCCC-CcHHHHHHHcCChHHHHHHHh
Q psy11819        558 TKDGDTPLLKAVKTR-NLEAIQMLIDKKAKITAVDKRG-DTVLHIAMRARSKTIVEVFIR  615 (651)
Q Consensus       558 ~~~g~t~L~~A~~~~-~~~~v~~Ll~~ga~~~~~d~~g-~t~l~~A~~~~~~~~~~~Ll~  615 (651)
                      |..|+|||+.|++.+ ..++++.|+..++.++..+..+ .+++..+...++.+..+++.+
T Consensus       285 d~~g~TpL~~A~~~~~~~~~ik~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  344 (434)
T PHA02874        285 DNKGENPIDTAFKYINKDPVIKDIIANAVLIKEADKLKDSDFLEHIEIKDNKEFSDFIKE  344 (434)
T ss_pred             CCCCCCHHHHHHHhCCccHHHHHHHHhcCchhhccccchhHHHHHHHHhccchHHHHHHH
Confidence            888888888888776 6678888888877766555544 455666655555555444443

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=3.7e-44  Score=358.51  Aligned_cols=227  Identities=25%  Similarity=0.380  Sum_probs=205.9

Q ss_pred             CCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q psy11819        407 GHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGA  486 (651)
Q Consensus       407 ~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~  486 (651)
                      ...+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|+
T Consensus       102 ~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~  181 (434)
T PHA02874        102 IEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGA  181 (434)
T ss_pred             CCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCC
Confidence            35688999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHH
Q psy11819        487 YINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLL  566 (651)
Q Consensus       487 ~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~  566 (651)
                      +++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||.|+..+. +.+++|+ .|++++..|..|+||||
T Consensus       182 ~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh  259 (434)
T PHA02874        182 YANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLH  259 (434)
T ss_pred             CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHH
Confidence            999999999999999999999999999999999999999999999999998765 5677776 68999999999999999


Q ss_pred             HHHHcC-CHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC-ChHHHHHHHhCCCCcccccCCCCCC-CCcccccc
Q psy11819        567 KAVKTR-NLEAIQMLIDKKAKITAVDKRGDTVLHIAMRAR-SKTIVEVFIRNPKNNILLYRPNKAG-ETPYSIDM  638 (651)
Q Consensus       567 ~A~~~~-~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~-~~~~~~~Ll~~~~~~~~~~~~~~~g-~t~l~~a~  638 (651)
                      +|+..+ +.+++++|+++|++++.+|..|.|||++|++.+ ..++++.|+.++..   ....+..+ .+++..+.
T Consensus       260 ~A~~~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~~~~~~ik~ll~~~~~---~~~~~~~~~~~~~~~~~  331 (434)
T PHA02874        260 HAINPPCDIDIIDILLYHKADISIKDNKGENPIDTAFKYINKDPVIKDIIANAVL---IKEADKLKDSDFLEHIE  331 (434)
T ss_pred             HHHhcCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCccHHHHHHHHhcCc---hhhccccchhHHHHHHH
Confidence            999876 789999999999999999999999999999987 77899999998865   33334444 34444443

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.2e-41  Score=347.21  Aligned_cols=290  Identities=27%  Similarity=0.299  Sum_probs=224.0

Q ss_pred             HHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcC---CHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcC-hHH
Q psy11819        195 TYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKG---HTDTVALLLDKNADVNAHGNYHISSLIWAAGRG-YTE  270 (651)
Q Consensus       195 ~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~---~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~-~~~  270 (651)
                      ..++..++.+++++|++.|++++..+..|.||||+|+..+   +.+++++|++.|++++..+..|.||||+|+..+ ..+
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~   98 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLD   98 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHH
Confidence            4456778888999999999988888888889999988888   888888888888888888888888888888888 588


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhc
Q psy11819        271 IVALLVKKGAKVNVGDKVYGTTPLVWAC--RKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVG  348 (651)
Q Consensus       271 ~v~~L~~~~~~~~~~~~~~~~~~l~~a~--~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (651)
                      ++++|+++|++++..+. .|.||||+|+  ..++.+++++|++.|++++..+                            
T Consensus        99 iv~lLl~~ga~in~~~~-~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d----------------------------  149 (471)
T PHA03095         99 VIKLLIKAGADVNAKDK-VGRTPLHVYLSGFNINPKVIRLLLRKGADVNALD----------------------------  149 (471)
T ss_pred             HHHHHHHcCCCCCCCCC-CCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccC----------------------------
Confidence            88888888888877776 6888888888  4456778888888877766433                            


Q ss_pred             hhcccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHHcC--CHHHHHHHHHcCCCCCCcC
Q psy11819        349 LYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKG--HVEIVDILLKAGANVDVAG  426 (651)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~--~~~~v~~Ll~~~~~~~~~~  426 (651)
                                                                   ..|.||||.|+..+  +.+++++|++.|++++..+
T Consensus       150 ---------------------------------------------~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d  184 (471)
T PHA03095        150 ---------------------------------------------LYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVD  184 (471)
T ss_pred             ---------------------------------------------CCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccC
Confidence                                                         44677888777655  5677777777777777777


Q ss_pred             cCCChHHHHHHhc--CcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH--HHHHHHHhCCCCCcccCCCCCcHHHHH
Q psy11819        427 LYCWTPLLVATLG--NFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYY--EIAVLLLNSGAYINIQDRSGDSNLIHA  502 (651)
Q Consensus       427 ~~~~t~l~~a~~~--~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~--~~~~~Ll~~g~~~~~~~~~~~t~l~~A  502 (651)
                      ..|.||||.++..  +..++++.|+++|++++..|..|.||||+|+..|+.  .+++.|++.|++++.+|..|.||||+|
T Consensus       185 ~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A  264 (471)
T PHA03095        185 DRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYA  264 (471)
T ss_pred             CCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence            7777777777653  566777777777777777777777777777777754  466777777777777777777777777


Q ss_pred             HhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccC
Q psy11819        503 VKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT  558 (651)
Q Consensus       503 ~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~  558 (651)
                      +..|+.+++++|+++|++++..+.+|.||||+|+.+|+.++++.|++.+++++..+
T Consensus       265 ~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~~~~  320 (471)
T PHA03095        265 AVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAETVA  320 (471)
T ss_pred             HHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHHHHH
Confidence            77777777777777777777777777777777777777777777777777765443

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=3.3e-41  Score=343.91  Aligned_cols=292  Identities=26%  Similarity=0.340  Sum_probs=261.8

Q ss_pred             HHHHHcCCHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcC---hHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC-CH
Q psy11819        228 MWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRG---YTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKG-HV  303 (651)
Q Consensus       228 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~---~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~-~~  303 (651)
                      ..+...++.+++++|+++|++++..+..|.||||+|+..+   +.+++++|++.|++++..+. .|.||||+|+..+ +.
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~-~g~TpLh~A~~~~~~~   97 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPER-CGFTPLHLYLYNATTL   97 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcCCcH
Confidence            4566778899999999999999999999999999999988   99999999999999998888 7999999999999 59


Q ss_pred             HHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCCCCccchh
Q psy11819        304 EIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFS  383 (651)
Q Consensus       304 ~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (651)
                      +++++|+++|++++..+                                                               
T Consensus        98 ~iv~lLl~~ga~in~~~---------------------------------------------------------------  114 (471)
T PHA03095         98 DVIKLLIKAGADVNAKD---------------------------------------------------------------  114 (471)
T ss_pred             HHHHHHHHcCCCCCCCC---------------------------------------------------------------
Confidence            99999999999877543                                                               


Q ss_pred             hhHHHHHhhcCCCChHHHHHH--HcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcC--cHHHHHHHHhcCCCCCCCC
Q psy11819        384 SLLFVLVMHLSYGTTPLVWAC--RKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGN--FTEVVELLLEYKPNVNALD  459 (651)
Q Consensus       384 ~~~~~~~~~~~~~~t~l~~A~--~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~--~~~~~~~Ll~~~~~~~~~~  459 (651)
                                ..|.||||.|+  ..++.+++++|+++|++++..+..|.||||.++..+  ..+++++|+++|++++..+
T Consensus       115 ----------~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d  184 (471)
T PHA03095        115 ----------KVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVD  184 (471)
T ss_pred             ----------CCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccC
Confidence                      55889999999  566889999999999999999999999999888765  6789999999999998888


Q ss_pred             CCCCcHHHHHHHc--CcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcH--HHHHHHHhcCCCCCCCCCCCCCHHHHH
Q psy11819        460 KDGCTALTIACKD--GYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHR--GIVEALLKKYVDVDIPGKERKTAVYTA  535 (651)
Q Consensus       460 ~~g~t~l~~A~~~--~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~--~~v~~Ll~~~~~~~~~~~~g~t~l~~A  535 (651)
                      ..|.||||.++..  +..+++++|+++|++++.+|..|.||||.|+..++.  .+++.|++.|++++.+|..|.||||+|
T Consensus       185 ~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A  264 (471)
T PHA03095        185 DRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYA  264 (471)
T ss_pred             CCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence            8999999998875  678899999999999999999999999999998875  578889999999999999999999999


Q ss_pred             HHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC
Q psy11819        536 VEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKR  593 (651)
Q Consensus       536 ~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~  593 (651)
                      +..|+.+++++|++.|++++..+..|+||||+|+.+|+.+++++|++.+++++..+..
T Consensus       265 ~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~~~~~~  322 (471)
T PHA03095        265 AVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAETVAAT  322 (471)
T ss_pred             HHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999888766543

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=6.4e-41  Score=342.35  Aligned_cols=224  Identities=32%  Similarity=0.398  Sum_probs=126.9

Q ss_pred             CChHHHH-----HHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHH--hcCcHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q psy11819        396 GTTPLVW-----ACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVAT--LGNFTEVVELLLEYKPNVNALDKDGCTALTI  468 (651)
Q Consensus       396 ~~t~l~~-----A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~--~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~  468 (651)
                      +.||++.     |+..++.+++++|++.|++++..+..|.||||.|+  ..++.+++++|+++|++++..+..|.||||+
T Consensus        68 ~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~  147 (480)
T PHA03100         68 NSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHL  147 (480)
T ss_pred             CcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence            3455555     55555555555555555555555555555555555  5555555555555555555555555555555


Q ss_pred             HHHcC--cHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCC------CCHHHHHHHcCC
Q psy11819        469 ACKDG--YYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER------KTAVYTAVEKGN  540 (651)
Q Consensus       469 A~~~~--~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g------~t~l~~A~~~~~  540 (651)
                      |+..|  +.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++++..+..|      .||||.|+..++
T Consensus       148 A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~  227 (480)
T PHA03100        148 YLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNE  227 (480)
T ss_pred             HHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCc
Confidence            55555  5555555555555555555555555555555555555555555555555555555      555555555555


Q ss_pred             --HHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCC
Q psy11819        541 --VPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK  618 (651)
Q Consensus       541 --~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~  618 (651)
                        .+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|+..++.+++++|+++|+
T Consensus       228 ~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~  307 (480)
T PHA03100        228 ITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGP  307 (480)
T ss_pred             CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCC
Confidence              555555555555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             C
Q psy11819        619 N  619 (651)
Q Consensus       619 ~  619 (651)
                      +
T Consensus       308 ~  308 (480)
T PHA03100        308 S  308 (480)
T ss_pred             C
Confidence            4

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=3.1e-40  Score=337.28  Aligned_cols=280  Identities=29%  Similarity=0.366  Sum_probs=183.7

Q ss_pred             CHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCcHHHH-----HHhcChHHHHHHHH
Q psy11819        202 YTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIW-----AAGRGYTEIVALLV  276 (651)
Q Consensus       202 ~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~-----a~~~~~~~~v~~L~  276 (651)
                      ..++++++++.+...+..+..+.||||.|+..|+.+++++|++.|++++..+..+.+||++     |+..++.+++++|+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll   93 (480)
T PHA03100         14 KVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLL   93 (480)
T ss_pred             HHHHHHHHHhcCccchhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHH
Confidence            4577888887776666667778888888888888888888888888888877777788888     77777777777777


Q ss_pred             HcCCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcccC
Q psy11819        277 KKGAKVNVGDKVYGTTPLVWAC--RKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWG  354 (651)
Q Consensus       277 ~~~~~~~~~~~~~~~~~l~~a~--~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (651)
                      +.|++++..+. .|.|||++|+  ..|+.+++++|+++|++++..+                                  
T Consensus        94 ~~ga~i~~~d~-~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~----------------------------------  138 (480)
T PHA03100         94 EYGANVNAPDN-NGITPLLYAISKKSNSYSIVEYLLDNGANVNIKN----------------------------------  138 (480)
T ss_pred             HCCCCCCCCCC-CCCchhhHHHhcccChHHHHHHHHHcCCCCCccC----------------------------------
Confidence            77777765555 5777777777  7777777777777766654332                                  


Q ss_pred             CCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHHcC--CHHHHHHHHHcCCCCCCcCcCCChH
Q psy11819        355 SGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKG--HVEIVDILLKAGANVDVAGLYCWTP  432 (651)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~--~~~~v~~Ll~~~~~~~~~~~~~~t~  432 (651)
                                                             ..|.||||.|+..+  +.+++++|+++|++++..+..|.||
T Consensus       139 ---------------------------------------~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tp  179 (480)
T PHA03100        139 ---------------------------------------SDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTP  179 (480)
T ss_pred             ---------------------------------------CCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCH
Confidence                                                   34566777776666  6666666666666666666666666


Q ss_pred             HHHHHhcCcHHHHHHHHhcCCCCCCCCCCC------CcHHHHHHHcCc--HHHHHHHHhCCCCCcccCCCCCcHHHHHHh
Q psy11819        433 LLVATLGNFTEVVELLLEYKPNVNALDKDG------CTALTIACKDGY--YEIAVLLLNSGAYINIQDRSGDSNLIHAVK  504 (651)
Q Consensus       433 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g------~t~l~~A~~~~~--~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~  504 (651)
                      ||.|+..++.+++++|+++|++++..+..|      .||+|.|+..|+  .+++++|+++|++++.+|..|.||||.|+.
T Consensus       180 L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~  259 (480)
T PHA03100        180 LHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVY  259 (480)
T ss_pred             HHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence            666666666666666666666666666666      455555555555  555555555555555555555555555555


Q ss_pred             cCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcc
Q psy11819        505 GGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLE  555 (651)
Q Consensus       505 ~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~  555 (651)
                      .++.+++++|+++|++++.++..|.||+++|+..++.+++++|+++|++++
T Consensus       260 ~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~  310 (480)
T PHA03100        260 NNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIK  310 (480)
T ss_pred             cCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHH
Confidence            555555555555555555555555555555555555555555555555444

>KOG0508|consensus

Probab=100.00  E-value=6.4e-41  Score=301.61  Aligned_cols=226  Identities=32%  Similarity=0.463  Sum_probs=192.8

Q ss_pred             HHhhcCcHHHHHHHHhhcCCccCCCCccchhhhhhhhccCCchHHHHHHHhhCCCCCccccchHHHHHHhcCCHHHHHHH
Q psy11819         20 HAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLL   99 (651)
Q Consensus        20 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~l~~A~~~~~~~i~~~Ll~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L   99 (651)
                      .|++.|.+..+..|+.+..+                      .+|...+ .     ....|.|||..||++||.++|++|
T Consensus        10 naa~~g~l~~l~~ll~~~s~----------------------~ei~~l~-~-----~~~~g~tPL~iaaRnGH~~vVeyL   61 (615)
T KOG0508|consen   10 NAARDGKLQLLAKLLINSSN----------------------EEIISLI-G-----EVQNGGTPLLIAARNGHADVVEYL   61 (615)
T ss_pred             HHhhhhhHHHHHHHHhCCch----------------------HHHHHHh-c-----cccCCCCceeeehhcCcHHHHHHH
Confidence            78888888888877755332                      1222222 1     114667999999999999999999


Q ss_pred             HH-cCCChhhhhccCCCCchhhHHHHhhHHHHHHhhCHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy11819        100 LT-ANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVT  178 (651)
Q Consensus       100 l~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~  178 (651)
                      ++ .++++...                                    +....+.....|-+||-.|+..|++++|+.|++
T Consensus        62 le~~~a~~e~~------------------------------------GsV~FDge~IegappLWaAsaAGHl~vVk~L~~  105 (615)
T KOG0508|consen   62 LEHCRASPEQG------------------------------------GSVRFDGETIEGAPPLWAASAAGHLEVVKLLLR  105 (615)
T ss_pred             HHHhcCCccCC------------------------------------ceEEeCCcccCCCchhhHHhccCcHHHHHHHHH
Confidence            99 45544321                                    111223345678889999999999999999999


Q ss_pred             cCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCc
Q psy11819        179 RGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHIS  258 (651)
Q Consensus       179 ~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t  258 (651)
                      .|+++|.......|||-.||.-|++|+++||+++|+|++..+..|.|.|+.|+.+||.+++++|++.|++++.++..|.|
T Consensus       106 ~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNT  185 (615)
T KOG0508|consen  106 RGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNT  185 (615)
T ss_pred             hcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCch
Confidence            99999998888899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcChHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Q psy11819        259 SLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK  311 (651)
Q Consensus       259 ~L~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~  311 (651)
                      +||.+++.|+.+++++|+++|..+....  .|.|||..|...|+.++|.+|++
T Consensus       186 ALH~caEsG~vdivq~Ll~~ga~i~~d~--~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  186 ALHDCAESGSVDIVQLLLKHGAKIDVDG--HGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             HHHhhhhcccHHHHHHHHhCCceeeecC--CCCchHHHHhhhcchHHHHHHhc
Confidence            9999999999999999999999888766  49999999999999999999996

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.4e-39  Score=327.67  Aligned_cols=193  Identities=29%  Similarity=0.283  Sum_probs=168.7

Q ss_pred             HHHHHHHHHcCCCCCCcCcC-CChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy11819        409 VEIVDILLKAGANVDVAGLY-CWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAY  487 (651)
Q Consensus       409 ~~~v~~Ll~~~~~~~~~~~~-~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~  487 (651)
                      .+++++|+++|++++..+.. |.||||+|+..++.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++
T Consensus       147 ~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~  226 (477)
T PHA02878        147 AEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAS  226 (477)
T ss_pred             HHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence            46899999999999999888 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccCCCCCcHHHHHHhc-CcHHHHHHHHhcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHH
Q psy11819        488 INIQDRSGDSNLIHAVKG-GHRGIVEALLKKYVDVDIPGK-ERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPL  565 (651)
Q Consensus       488 ~~~~~~~~~t~l~~A~~~-~~~~~v~~Ll~~~~~~~~~~~-~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L  565 (651)
                      ++.++..|.||||+|+.. ++.+++++|+++|++++..+. .|.||||+|  .++.+++++|+++|+++|..|..|.|||
T Consensus       227 in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL  304 (477)
T PHA02878        227 TDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPL  304 (477)
T ss_pred             CCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence            999999999999999975 789999999999999998875 799999999  5678999999999999999999999999


Q ss_pred             HHHHHcC-CHHHHHHHHHc-----CCCCcccCCCCCcHHHHHHH
Q psy11819        566 LKAVKTR-NLEAIQMLIDK-----KAKITAVDKRGDTVLHIAMR  603 (651)
Q Consensus       566 ~~A~~~~-~~~~v~~Ll~~-----ga~~~~~d~~g~t~l~~A~~  603 (651)
                      |+|+..+ ..+++++|+.+     +.+++..+..|..+-..++.
T Consensus       305 ~~A~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~g~~~n~~~i~  348 (477)
T PHA02878        305 SSAVKQYLCINIGRILISNICLLKRIKPDIKNSEGFIDNMDCIT  348 (477)
T ss_pred             HHHHHHcCccchHHHHHHHHHHHHhccCcccCcHHHHHHHHHHh
Confidence            9999754 56778877765     45677777777666555544

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.8e-39  Score=328.61  Aligned_cols=304  Identities=26%  Similarity=0.256  Sum_probs=239.1

Q ss_pred             CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q psy11819        219 RDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWAC  298 (651)
Q Consensus       219 ~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~  298 (651)
                      .+..+.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.+.....   ..+.++++.|+
T Consensus        33 ~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~---~~~~~~l~~a~  109 (477)
T PHA02878         33 ASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV---FYTLVAIKDAF  109 (477)
T ss_pred             ccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc---ccchhhHHHHH
Confidence            445667788888888888888888888888888777788888888888888777777776544433   13556777777


Q ss_pred             HcCCHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCCCC
Q psy11819        299 RKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDP  378 (651)
Q Consensus       299 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (651)
                      ..++.+++++|+..+.+....                                                           
T Consensus       110 ~~~~~ei~~~Ll~~~~~~~~~-----------------------------------------------------------  130 (477)
T PHA02878        110 NNRNVEIFKIILTNRYKNIQT-----------------------------------------------------------  130 (477)
T ss_pred             HcCCHHHHHHHHhCcccCccc-----------------------------------------------------------
Confidence            777777777776653321100                                                           


Q ss_pred             ccchhhhHHHHHhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCC
Q psy11819        379 TFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNAL  458 (651)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~  458 (651)
                                         ..+.            .+....                .......+++++|+++|++++..
T Consensus       131 -------------------~~~~------------~~~~~~----------------~~~~~~~~iv~~Ll~~gadin~~  163 (477)
T PHA02878        131 -------------------IDLV------------YIDKKS----------------KDDIIEAEITKLLLSYGADINMK  163 (477)
T ss_pred             -------------------CcHH------------HHhhcc----------------chhhHHHHHHHHHHHcCCCCCcc
Confidence                               0000            000000                00012346999999999999999


Q ss_pred             CCC-CCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Q psy11819        459 DKD-GCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVE  537 (651)
Q Consensus       459 ~~~-g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~  537 (651)
                      +.. |.||||+|+..|+.+++++|+++|++++..+..|.||||.|+..++.+++++|+++|++++.+|..|.||||+|+.
T Consensus       164 ~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~  243 (477)
T PHA02878        164 DRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVG  243 (477)
T ss_pred             CCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence            998 9999999999999999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             c-CCHHHHHHHHhcCCCccccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC-ChHHHHHHH
Q psy11819        538 K-GNVPILKLLLTANPDLEIATK-DGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRAR-SKTIVEVFI  614 (651)
Q Consensus       538 ~-~~~~~v~~Ll~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~-~~~~~~~Ll  614 (651)
                      . ++.+++++|+++|++++..+. .|.||||+|  .++.+++++|+++|++++..|..|.||||+|+..+ ..+++++|+
T Consensus       244 ~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li  321 (477)
T PHA02878        244 YCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILI  321 (477)
T ss_pred             hcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHH
Confidence            6 789999999999999998886 799999999  57889999999999999999999999999999754 567788777


Q ss_pred             hCCCC--cccccCCCCCCCCc
Q psy11819        615 RNPKN--NILLYRPNKAGETP  633 (651)
Q Consensus       615 ~~~~~--~~~~~~~~~~g~t~  633 (651)
                      .+...  ......++..|.++
T Consensus       322 ~~~~~~~~~~~~~~~~~g~~~  342 (477)
T PHA02878        322 SNICLLKRIKPDIKNSEGFID  342 (477)
T ss_pred             HHHHHHHhccCcccCcHHHHH
Confidence            65311  01144566666554

>PHA02792 ankyrin-like protein; Provisional

Probab=100.00  E-value=9.2e-39  Score=312.19  Aligned_cols=424  Identities=16%  Similarity=0.161  Sum_probs=294.0

Q ss_pred             HHHHHHcCCChhhhhccCCCCchhhHHHHhhHHHHHHhhCHHHHHHHHHcCCCCCCCCCCCCCcHHHH-HHHcCCHHHHH
Q psy11819         96 LKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMF-AAQKGKLSFVR  174 (651)
Q Consensus        96 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~t~l~~-A~~~g~~~~v~  174 (651)
                      .+.|+++|+++....+           ...+|.....+.+..+=..++..-...++..+.+|.+++|+ |+..|++|+|+
T Consensus        21 ~~~l~~~g~~~~~~~~-----------~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~s~n~~lElvk   89 (631)
T PHA02792         21 AQSLIESGANPLYEYD-----------GETPLKAYVTKKNNNIKNDVVILLLSSVDYKNINDFDIFEYLCSDNIDIELLK   89 (631)
T ss_pred             HHHHHHcCCCcccccC-----------CCccHHHHHhhhhhhHHHHHHHHHHhCCCcCccCCccHHHHHHHhcccHHHHH
Confidence            5789999988754221           11334444444443332233333333445678889999986 66688999999


Q ss_pred             HHHHcCCCCcccCCCCCCHHHHHHH-hCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcCCHHHH-HHHH--hcCCCCC
Q psy11819        175 ELVTRGADVNAEDNDNWSPLTYAAR-EGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTV-ALLL--DKNADVN  250 (651)
Q Consensus       175 ~Ll~~~~~~~~~~~~~~t~L~~A~~-~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~v-~~Ll--~~~~~~~  250 (651)
                      +|+++|++++..+..+.+|+++|+. .|+.|++++|++.|++++..+..|.|||+.-+.+...--. ..+-  +.+..++
T Consensus        90 ~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  169 (631)
T PHA02792         90 LLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTD  169 (631)
T ss_pred             HHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccc
Confidence            9999999999999989999999965 6999999999999999988889999999876654321111 1111  1244567


Q ss_pred             CcCCCCCcHHHHHHhcC-------hHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCcccccc
Q psy11819        251 AHGNYHISSLIWAAGRG-------YTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKG--HVEIVDILLKAGANVDVAGL  321 (651)
Q Consensus       251 ~~~~~~~t~L~~a~~~~-------~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~--~~~~v~~Ll~~~~~~~~~~~  321 (651)
                      ..+..|.||||+++..+       +.++++.|+++|++++..+. .|.||||+|+.+.  +.++++.|++........  
T Consensus       170 ~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~-~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~--  246 (631)
T PHA02792        170 YDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTY-REHTTLYYYVDKCDIKREIFDALFDSNYSGNEL--  246 (631)
T ss_pred             cCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCC-CCChHHHHHHHcccchHHHHHHHHhccccccch--
Confidence            78888999999999999       89999999999999998888 6999999999999  899999999841111000  


Q ss_pred             cccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCChHHH
Q psy11819        322 WAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLV  401 (651)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~  401 (651)
                             .                                   .-...++....                          
T Consensus       247 -------~-----------------------------------~~l~~y~~~~~--------------------------  258 (631)
T PHA02792        247 -------M-----------------------------------NILSNYLRKQY--------------------------  258 (631)
T ss_pred             -------H-----------------------------------hHHHHHHHHHh--------------------------
Confidence                   0                                   00000000000                          


Q ss_pred             HHHHcC--CHHHHHHHHHcCCCCCCcCcCCChHHHHHH-hcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC--cHH
Q psy11819        402 WACRKG--HVEIVDILLKAGANVDVAGLYCWTPLLVAT-LGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDG--YYE  476 (651)
Q Consensus       402 ~A~~~~--~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~-~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~--~~~  476 (651)
                       -....  +..+|..|++.+..-+.        +.... .+.+..+...|.... +      .-+..||.-.+.+  +.+
T Consensus       259 -~~~~~~id~~iv~~ll~~~~~~~i--------~~~~~~~~~~~~~~~~~~~~~-~------~~q~~l~~Yl~~~~v~ie  322 (631)
T PHA02792        259 -RNKNHKIDNYIVDKLLSGHDTFYI--------LELCNSLRNNIIISSILKRYT-D------SIQDLLSEYVSYHTVYIN  322 (631)
T ss_pred             -ccCccCccHHHHHHHHhCCCccch--------hhhhhhhhhhhHHHHHHHHHh-H------HHHHHHHHHHhcCCccHH
Confidence             00011  23477777775432211        11111 111222222222211 1      0011344445555  578


Q ss_pred             HHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCC--CCHHHHHHHcCCH---HHHHHHHhcC
Q psy11819        477 IAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER--KTAVYTAVEKGNV---PILKLLLTAN  551 (651)
Q Consensus       477 ~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g--~t~l~~A~~~~~~---~~v~~Ll~~~  551 (651)
                      ++++|+++|+++.  ......+++.|+..++.+++++|+++|++++..|.+|  .||||+|+.....   +++++|+++|
T Consensus       323 iIK~LId~Ga~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~G  400 (631)
T PHA02792        323 VIKCMIDEGATLY--RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYI  400 (631)
T ss_pred             HHHHHHHCCCccc--cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcC
Confidence            8999999998764  2224556888888999999999999999998888764  5888887766654   3578889999


Q ss_pred             CCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH----------cCChHHHHHHHhCCCC
Q psy11819        552 PDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMR----------ARSKTIVEVFIRNPKN  619 (651)
Q Consensus       552 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~----------~~~~~~~~~Ll~~~~~  619 (651)
                      +++|.+|..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+.          ....++++.|++++..
T Consensus       401 ADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~  478 (631)
T PHA02792        401 DDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPT  478 (631)
T ss_pred             CccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCC
Confidence            9999999999999999999999999999999999999999999999999875          1225678888888865

>PHA02989 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.7e-38  Score=322.24  Aligned_cols=208  Identities=21%  Similarity=0.321  Sum_probs=101.3

Q ss_pred             HHHHHHHHHcCCCCCCcCcCCChHHHHHHhc---CcHHHHHHHHhcCCCC-CCCCCCCCcHHHHHHHc--CcHHHHHHHH
Q psy11819        409 VEIVDILLKAGANVDVAGLYCWTPLLVATLG---NFTEVVELLLEYKPNV-NALDKDGCTALTIACKD--GYYEIAVLLL  482 (651)
Q Consensus       409 ~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~---~~~~~~~~Ll~~~~~~-~~~~~~g~t~l~~A~~~--~~~~~~~~Ll  482 (651)
                      .+++++|+++|++++.++..|.|||+.|+..   ++.+++++|+++|+++ +..+..|.||||+|+..  ++.+++++|+
T Consensus        88 ~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll  167 (494)
T PHA02989         88 KKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILL  167 (494)
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHH
Confidence            3445555555555555554555555444332   3445555555555555 44444555555544432  3445555555


Q ss_pred             hCCCCCcc-cCCCCCcHHHHHHhcC----cHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHc------CCHHHHHHHHhcC
Q psy11819        483 NSGAYINI-QDRSGDSNLIHAVKGG----HRGIVEALLKKYVDVDIPGKERKTAVYTAVEK------GNVPILKLLLTAN  551 (651)
Q Consensus       483 ~~g~~~~~-~~~~~~t~l~~A~~~~----~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~------~~~~~v~~Ll~~~  551 (651)
                      ++|++++. .+..|.|||+.|+..+    +.+++++|+++|++++..+..+.++||.++..      +..+++++|+. |
T Consensus       168 ~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~  246 (494)
T PHA02989        168 SFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-Y  246 (494)
T ss_pred             HcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-C
Confidence            55555444 3444555555444332    44555555555555554444445555444332      22344444332 3


Q ss_pred             CCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCC
Q psy11819        552 PDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNP  617 (651)
Q Consensus       552 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~  617 (651)
                      +++|.+|..|+||||+|+..|+.++|++|++.|++++.+|..|+||||+|+..++.++++.|++.+
T Consensus       247 advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~  312 (494)
T PHA02989        247 IKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLK  312 (494)
T ss_pred             CCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            555555555555555555555555555555555555555555555555555555555555555443

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=4.1e-38  Score=287.06  Aligned_cols=215  Identities=22%  Similarity=0.262  Sum_probs=199.0

Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q psy11819        394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDG  473 (651)
Q Consensus       394 ~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~  473 (651)
                      ..|.||||+|+..|+.+++++|++.|++++..+  ++||||.|+..++.+++++|+++|++++..+..|.||||+|+..|
T Consensus        28 ~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g  105 (284)
T PHA02791         28 VHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSG  105 (284)
T ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence            568999999999999999999999999988764  689999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHhCCCCCcccCCCC-CcHHHHHHhcCcHHHHHHHHhcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy11819        474 YYEIAVLLLNSGAYINIQDRSG-DSNLIHAVKGGHRGIVEALLKKYVDVDIPG-KERKTAVYTAVEKGNVPILKLLLTAN  551 (651)
Q Consensus       474 ~~~~~~~Ll~~g~~~~~~~~~~-~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~g~t~l~~A~~~~~~~~v~~Ll~~~  551 (651)
                      +.+++++|+++|++++..+..| .||||+|+..|+.+++++|++++.+.  .+ ..|.||||+|+.+|+.+++++|+++|
T Consensus       106 ~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~g  183 (284)
T PHA02791        106 NMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMILLLDYM  183 (284)
T ss_pred             CHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCHHHHHHHHHCC
Confidence            9999999999999999998887 58999999999999999999987543  23 35899999999999999999999999


Q ss_pred             CCccccCCCCCcH-HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCC
Q psy11819        552 PDLEIATKDGDTP-LLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKN  619 (651)
Q Consensus       552 ~~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~  619 (651)
                      ++++.++..|.|| ||+|+.+|+.++|++|+++|++++.+|..| ++|      +..|++++|+++..+
T Consensus       184 Ad~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~-~~l------~~~e~~~~ll~~~~~  245 (284)
T PHA02791        184 TSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLEN-VLL------DDAEIAKMIIEKHVE  245 (284)
T ss_pred             CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcccC-ccC------CCHHHHHHHHHhhhh
Confidence            9999999999987 999999999999999999999999999844 555      889999999998765

>PHA02989 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.1e-37  Score=314.14  Aligned_cols=283  Identities=23%  Similarity=0.316  Sum_probs=196.8

Q ss_pred             hCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHc--CCHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHHHHHHHH
Q psy11819        200 EGYTDVCAELLDHGADLEHRDMGGWSPLMWASYK--GHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK  277 (651)
Q Consensus       200 ~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~--~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~v~~L~~  277 (651)
                      ..+.+++++|++.|++++.. ..|.|||+.++..  ++.+++++|+++|++++..+ .+.|||+.|+..+...       
T Consensus        13 ~~~~~~v~~LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~-------   83 (494)
T PHA02989         13 TVDKNALEFLLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREIT-------   83 (494)
T ss_pred             cCcHHHHHHHHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcc-------
Confidence            35677777777777777766 4567776554433  25677777777777777654 3456666554432210       


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCc
Q psy11819        278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGK  357 (651)
Q Consensus       278 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (651)
                                           ..++.+++++|+++|++++..+                                     
T Consensus        84 ---------------------~~~~~~iv~~Ll~~Gadin~~d-------------------------------------  105 (494)
T PHA02989         84 ---------------------SNKIKKIVKLLLKFGADINLKT-------------------------------------  105 (494)
T ss_pred             ---------------------hhhHHHHHHHHHHCCCCCCCCC-------------------------------------
Confidence                                 0233566667777766665433                                     


Q ss_pred             ccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHHc---CCHHHHHHHHHcCCCC-CCcCcCCChHH
Q psy11819        358 SFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRK---GHVEIVDILLKAGANV-DVAGLYCWTPL  433 (651)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~---~~~~~v~~Ll~~~~~~-~~~~~~~~t~l  433 (651)
                                                          ..|.|||+.|+..   ++.+++++|+++|+++ +..+..|+|||
T Consensus       106 ------------------------------------~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpL  149 (494)
T PHA02989        106 ------------------------------------FNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLL  149 (494)
T ss_pred             ------------------------------------CCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHH
Confidence                                                3456777666544   5677778888888777 67777778888


Q ss_pred             HHHHhc--CcHHHHHHHHhcCCCCCC-CCCCCCcHHHHHHHcC----cHHHHHHHHhCCCCCcccCCCCCcHHHHHHhc-
Q psy11819        434 LVATLG--NFTEVVELLLEYKPNVNA-LDKDGCTALTIACKDG----YYEIAVLLLNSGAYINIQDRSGDSNLIHAVKG-  505 (651)
Q Consensus       434 ~~a~~~--~~~~~~~~Ll~~~~~~~~-~~~~g~t~l~~A~~~~----~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~-  505 (651)
                      |+|+..  ++.+++++|+++|++++. .+..|.||||.|++.+    +.+++++|+++|++++..+..+.++++.++.. 
T Consensus       150 h~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~  229 (494)
T PHA02989        150 HMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNN  229 (494)
T ss_pred             HHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhc
Confidence            777643  467778888888877776 4667778887776653    67788888888888877777777777766543 


Q ss_pred             -----CcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHH
Q psy11819        506 -----GHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQML  580 (651)
Q Consensus       506 -----~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L  580 (651)
                           +..+++++|+. +++++.+|..|.||||+|+..++.+++++|++.|+|++.+|..|+||||+|+..|+.++|+.|
T Consensus       230 ~~~~~~~~~il~~l~~-~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~L  308 (494)
T PHA02989        230 KILSKKEFKVLNFILK-YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRI  308 (494)
T ss_pred             hhhcccchHHHHHHHh-CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence                 34566676554 577888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHcCCC
Q psy11819        581 IDKKAK  586 (651)
Q Consensus       581 l~~ga~  586 (651)
                      ++.+..
T Consensus       309 L~~~p~  314 (494)
T PHA02989        309 LQLKPG  314 (494)
T ss_pred             HhcCCC
Confidence            877654

>KOG0508|consensus

Probab=100.00  E-value=8.4e-38  Score=281.61  Aligned_cols=217  Identities=31%  Similarity=0.433  Sum_probs=193.1

Q ss_pred             hHHHHHHhhCHHHHHHHHHcCCCC----CCCCCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCc--------ccCCCCCC
Q psy11819        126 TLQSYIAEDNLDSLQTFLENKRTV----ADDRDDNGGTALMFAAQKGKLSFVRELVT-RGADVN--------AEDNDNWS  192 (651)
Q Consensus       126 ~l~~~~~~~~~~~v~~~l~~~~~~----~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~-~~~~~~--------~~~~~~~t  192 (651)
                      ....+++.|.+..+..++.+....    .-....+|.|||-+||++|+.++|+||++ .++++.        -...+|-+
T Consensus         7 ~~~naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~Iegap   86 (615)
T KOG0508|consen    7 VVINAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAP   86 (615)
T ss_pred             HHHHHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCc
Confidence            344778888888888888776532    13456789999999999999999999998 444432        23457889


Q ss_pred             HHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHHH
Q psy11819        193 PLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIV  272 (651)
Q Consensus       193 ~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~v  272 (651)
                      ||-.|+..||+++|+.|+++|+++|..+....|||..||.-|+.++++||+++|++++..+..|.|.|+.|+.+|+.+++
T Consensus        87 pLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~  166 (615)
T KOG0508|consen   87 PLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIA  166 (615)
T ss_pred             hhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHH
Confidence            99999999999999999999999999888888999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcc
Q psy11819        273 ALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAK  352 (651)
Q Consensus       273 ~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (651)
                      ++|++.|++++.+.. .|.|+||.++..|+.+++++|+.+|+.++..                                 
T Consensus       167 qyLle~gADvn~ks~-kGNTALH~caEsG~vdivq~Ll~~ga~i~~d---------------------------------  212 (615)
T KOG0508|consen  167 QYLLEQGADVNAKSY-KGNTALHDCAESGSVDIVQLLLKHGAKIDVD---------------------------------  212 (615)
T ss_pred             HHHHHhCCCcchhcc-cCchHHHhhhhcccHHHHHHHHhCCceeeec---------------------------------
Confidence            999999999999988 7999999999999999999999999987643                                 


Q ss_pred             cCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHHcCCHHHHHHHHH
Q psy11819        353 WGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLK  417 (651)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~  417 (651)
                                                               ..|.|||..|...|+.++|.+|++
T Consensus       213 -----------------------------------------~~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  213 -----------------------------------------GHGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             -----------------------------------------CCCCchHHHHhhhcchHHHHHHhc
Confidence                                                     458999999999999999999995

>PHA02792 ankyrin-like protein; Provisional

Probab=100.00  E-value=9.5e-37  Score=298.12  Aligned_cols=215  Identities=13%  Similarity=0.105  Sum_probs=157.5

Q ss_pred             chHHHHhhcCcHHH--HHHHHhhcCCccCCCCccchhhhhhhhccCCc----hHHHHHHHhhCCCCCccccchHHH-HHH
Q psy11819         16 SNLIHAVKGGHRGI--VEALLKKYVDVDIPGKVRKLSDALNVTDANDQ----RSTTRNLLDKNKHKSLKERKTAVY-TAV   88 (651)
Q Consensus        16 t~L~~A~~~g~~~~--v~~Ll~~g~~~~~~~~~~~~~~~l~~A~~~~~----~~i~~~Ll~~~~~~~~~~~~~~l~-~A~   88 (651)
                      ..|.-.|+.=+.+.  .+.|+++|+++-. .+  ...+||+.=..+.+    .+++-.|++.....+ -++.++++ .|.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~--~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n-~~~~~~~~~~~s   80 (631)
T PHA02792          5 KILYDSCKTFNIDACSAQSLIESGANPLY-EY--DGETPLKAYVTKKNNNIKNDVVILLLSSVDYKN-INDFDIFEYLCS   80 (631)
T ss_pred             hHHHhHhhccchhHHHHHHHHHcCCCccc-cc--CCCccHHHHHhhhhhhHHHHHHHHHHhCCCcCc-cCCccHHHHHHH
Confidence            44444555444443  4679999999755 23  33488887755554    335555555543333 34556776 566


Q ss_pred             hcCCHHHHHHHHHcCCChhhhhccCCCCchhhHHHHhhHHHHHHhhCHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHH-c
Q psy11819         89 EKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQ-K  167 (651)
Q Consensus        89 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~t~l~~A~~-~  167 (651)
                      .+|++|+|++|+++|++++.                                            .+..+.+++++|+. .
T Consensus        81 ~n~~lElvk~LI~~GAdvN~--------------------------------------------~~n~~~~~l~ya~~~~  116 (631)
T PHA02792         81 DNIDIELLKLLISKGLEINS--------------------------------------------IKNGINIVEKYATTSN  116 (631)
T ss_pred             hcccHHHHHHHHHcCCCccc--------------------------------------------ccCCCCcceeEeecCC
Confidence            78899999999999987642                                            34457789999966 6


Q ss_pred             CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhC-CHHHHHHHH--HcCCCCCCCCCCCchHHHHHHHcC-------CHH
Q psy11819        168 GKLSFVRELVTRGADVNAEDNDNWSPLTYAAREG-YTDVCAELL--DHGADLEHRDMGGWSPLMWASYKG-------HTD  237 (651)
Q Consensus       168 g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g-~~~iv~~Ll--~~~~~~~~~~~~~~t~L~~A~~~~-------~~~  237 (651)
                      |+.|++++|++.|+++.+.+..|.|||+.-+-.. ..+.=+.+-  +.+-.++..+..|.||||+|+.++       +.+
T Consensus       117 ~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~  196 (631)
T PHA02792        117 PNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLD  196 (631)
T ss_pred             CChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHH
Confidence            8999999999999998888889999988765321 111111111  113345677888999999999999       899


Q ss_pred             HHHHHHhcCCCCCCcCCCCCcHHHHHHhcC--hHHHHHHHHHc
Q psy11819        238 TVALLLDKNADVNAHGNYHISSLIWAAGRG--YTEIVALLVKK  278 (651)
Q Consensus       238 ~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~--~~~~v~~L~~~  278 (651)
                      +++.|+++|++++..+..|.||||+|+...  ..|+++.|++.
T Consensus       197 v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~  239 (631)
T PHA02792        197 VINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDS  239 (631)
T ss_pred             HHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhc
Confidence            999999999999999999999999999999  89999999885

>PHA02875 ankyrin repeat protein; Provisional

Probab=100.00  E-value=9.3e-38  Score=311.56  Aligned_cols=244  Identities=23%  Similarity=0.261  Sum_probs=230.6

Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH
Q psy11819        396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYY  475 (651)
Q Consensus       396 ~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~  475 (651)
                      .+++|+.|+..|+.+++++|++.|++++..+..|.||||.|+..++.+++++|+++|++++..+.++.||||.|+..|+.
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~   81 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDV   81 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCH
Confidence            46899999999999999999999999999999999999999999999999999999999998888999999999999999


Q ss_pred             HHHHHHHhCCCCCc-ccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCc
Q psy11819        476 EIAVLLLNSGAYIN-IQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDL  554 (651)
Q Consensus       476 ~~~~~Ll~~g~~~~-~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~  554 (651)
                      +++++|++.|++++ ..+..|.||||.|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|+++
T Consensus        82 ~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~  161 (413)
T PHA02875         82 KAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACL  161 (413)
T ss_pred             HHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC
Confidence            99999999998764 44678999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC-cHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCc
Q psy11819        555 EIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGD-TVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP  633 (651)
Q Consensus       555 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~-t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~  633 (651)
                      +.+|..|.||||+|+..|+.+++++|++.|++++..+..|. ||+|+|+..++.+++++|+++|++.......+..|.||
T Consensus       162 ~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~~t~  241 (413)
T PHA02875        162 DIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEECTI  241 (413)
T ss_pred             CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCchHH
Confidence            99999999999999999999999999999999999988875 88999999999999999999999977666678889999


Q ss_pred             cccccc
Q psy11819        634 YSIDMN  639 (651)
Q Consensus       634 l~~a~~  639 (651)
                      ++++..
T Consensus       242 l~~~~~  247 (413)
T PHA02875        242 LDMICN  247 (413)
T ss_pred             HHHHHh
Confidence            987643

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=2.2e-37  Score=282.23  Aligned_cols=221  Identities=20%  Similarity=0.167  Sum_probs=203.6

Q ss_pred             cCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCC
Q psy11819        406 KGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSG  485 (651)
Q Consensus       406 ~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g  485 (651)
                      .++.+++++|.++|++  ..+..|+||||+|+..++.+++++|+++|++++..  ++.||||+|+..|+.+++++|+++|
T Consensus         9 ~~~~~~~~~Lis~~a~--~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~--d~~TpLh~Aa~~g~~eiV~lLL~~G   84 (284)
T PHA02791          9 WKSKQLKSFLSSKDAF--KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSG   84 (284)
T ss_pred             cCHHHHHHHHHhCCCC--CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCC--CCCCHHHHHHHCCCHHHHHHHHHCC
Confidence            5678999999999874  57889999999999999999999999999988775  4689999999999999999999999


Q ss_pred             CCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCC-CHHHHHHHcCCHHHHHHHHhcCCCccccC-CCCCc
Q psy11819        486 AYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERK-TAVYTAVEKGNVPILKLLLTANPDLEIAT-KDGDT  563 (651)
Q Consensus       486 ~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~-t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~g~t  563 (651)
                      ++++.++..|.||||+|+..|+.+++++|+++|++++..+..|+ ||||+|+..|+.+++++|++.+++.  .| ..|.|
T Consensus        85 advn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~T  162 (284)
T PHA02791         85 MDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLS  162 (284)
T ss_pred             CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCcc
Confidence            99999999999999999999999999999999999999988885 8999999999999999999997653  23 35899


Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcH-HHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccc
Q psy11819        564 PLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTV-LHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSI  636 (651)
Q Consensus       564 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~-l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~  636 (651)
                      |||+|+.+|+.+++++|+++|++++.+|..|.|| ||+|+.+|+.+++++|+++|++   ++.+|. +.|||+.
T Consensus       163 pLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~---in~~~~-~~~~l~~  232 (284)
T PHA02791        163 CIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDIN---IYSVNL-ENVLLDD  232 (284)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCC---CccCcc-cCccCCC
Confidence            9999999999999999999999999999999987 9999999999999999999999   778888 4477743

>PHA02875 ankyrin repeat protein; Provisional

Probab=100.00  E-value=4.9e-36  Score=299.21  Aligned_cols=252  Identities=25%  Similarity=0.274  Sum_probs=229.3

Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHH
Q psy11819        290 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMK  369 (651)
Q Consensus       290 ~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (651)
                      .+++|+.|+..|+.+++++|++.|++++...                                                 
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~-------------------------------------------------   32 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINPNFEI-------------------------------------------------   32 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCCCccC-------------------------------------------------
Confidence            4688999999999999999999999877542                                                 


Q ss_pred             HHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHH
Q psy11819        370 HFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLL  449 (651)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll  449 (651)
                                              ..|.||||.|+..|+.+++++|++.|++++..+..+.+|||.|+..|+.+++++|+
T Consensus        33 ------------------------~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll   88 (413)
T PHA02875         33 ------------------------YDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELL   88 (413)
T ss_pred             ------------------------CCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHHHHHHHH
Confidence                                    45889999999999999999999999999988888999999999999999999999


Q ss_pred             hcCCCCC-CCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCC
Q psy11819        450 EYKPNVN-ALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER  528 (651)
Q Consensus       450 ~~~~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g  528 (651)
                      +.|...+ ..+.+|.||||+|+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++++.++..|
T Consensus        89 ~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g  168 (413)
T PHA02875         89 DLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCG  168 (413)
T ss_pred             HcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCC
Confidence            9997664 346689999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHcCCHHHHHHHHhcCCCccccCCCC-CcHHHHHHHcCCHHHHHHHHHcCCCCccc---CCCCCcHHHHHHHc
Q psy11819        529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDG-DTPLLKAVKTRNLEAIQMLIDKKAKITAV---DKRGDTVLHIAMRA  604 (651)
Q Consensus       529 ~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g-~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~---d~~g~t~l~~A~~~  604 (651)
                      .||||+|+..|+.+++++|++.|++++..+..| .||+|+|+..|+.+++++|+++|++++..   +..+.||++.+...
T Consensus       169 ~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~~t~l~~~~~~  248 (413)
T PHA02875        169 CTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEECTILDMICNM  248 (413)
T ss_pred             CCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCchHHHHHHHhh
Confidence            999999999999999999999999999998887 48999999999999999999999999875   67789999987643


Q ss_pred             ---CChHHHHHHH
Q psy11819        605 ---RSKTIVEVFI  614 (651)
Q Consensus       605 ---~~~~~~~~Ll  614 (651)
                         ...+.++.++
T Consensus       249 ~~~~~~~~~~~li  261 (413)
T PHA02875        249 CTNLESEAIDALI  261 (413)
T ss_pred             cCCcccHHHHHHH
Confidence               3445555555

>PHA02798 ankyrin-like protein; Provisional

Probab=100.00  E-value=3.5e-36  Score=304.88  Aligned_cols=195  Identities=25%  Similarity=0.345  Sum_probs=96.9

Q ss_pred             CCCChHHHHHHHcC---CHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCc---HHHHHHHHhcCCCCCCCC-CCCCcHH
Q psy11819        394 SYGTTPLVWACRKG---HVEIVDILLKAGANVDVAGLYCWTPLLVATLGNF---TEVVELLLEYKPNVNALD-KDGCTAL  466 (651)
Q Consensus       394 ~~~~t~l~~A~~~~---~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~---~~~~~~Ll~~~~~~~~~~-~~g~t~l  466 (651)
                      ..|.||||.|+.++   +.+++++|+++|++++..+..|.||||.|+..++   .+++++|+++|++++..+ ..|.||+
T Consensus       107 ~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~L  186 (489)
T PHA02798        107 SDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTL  186 (489)
T ss_pred             CCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHH
Confidence            33555555555443   4455555555555555555555555555555444   555555555555554442 2344555


Q ss_pred             HHHHHc----CcHHHHHHHHhCCCCCcccCCCCCcHHH-------HHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Q psy11819        467 TIACKD----GYYEIAVLLLNSGAYINIQDRSGDSNLI-------HAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTA  535 (651)
Q Consensus       467 ~~A~~~----~~~~~~~~Ll~~g~~~~~~~~~~~t~l~-------~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A  535 (651)
                      |.++..    ++.+++++|+++|++++..+..+.++++       .+...++.+++++|+. +++++.+|..|.||||+|
T Consensus       187 h~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~dvN~~d~~G~TPL~~A  265 (489)
T PHA02798        187 HCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YIDINQVDELGFNPLYYS  265 (489)
T ss_pred             HHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCCCCCcCcCCccHHHHH
Confidence            554432    2445555555555555555444444443       1222333444444433 345555555555555555


Q ss_pred             HHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcc
Q psy11819        536 VEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITA  589 (651)
Q Consensus       536 ~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~  589 (651)
                      +..++.+++++|++.|+|++..|..|+|||+.|+.+++.++++.|++.|++++.
T Consensus       266 ~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~~  319 (489)
T PHA02798        266 VSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNKNT  319 (489)
T ss_pred             HHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCHHH
Confidence            555555555555555555555555555555555555555555555555555443

>KOG4412|consensus

Probab=100.00  E-value=4.2e-37  Score=240.38  Aligned_cols=206  Identities=27%  Similarity=0.306  Sum_probs=155.9

Q ss_pred             ChHHHHHHHcCCHHHHHHHHHcCC-CCCCcCc-CCChHHHHHHhcCcHHHHHHHHh-cCCCCCCCCCCCCcHHHHHHHcC
Q psy11819        397 TTPLVWACRKGHVEIVDILLKAGA-NVDVAGL-YCWTPLLVATLGNFTEVVELLLE-YKPNVNALDKDGCTALTIACKDG  473 (651)
Q Consensus       397 ~t~l~~A~~~~~~~~v~~Ll~~~~-~~~~~~~-~~~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~g~t~l~~A~~~~  473 (651)
                      .++.+.+|......-++.+.+... +.+.++. +++||||+|++-|..+++++|++ -+..++.+|..|+||||+|+..|
T Consensus         4 ~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g   83 (226)
T KOG4412|consen    4 ASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNG   83 (226)
T ss_pred             cchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcC
Confidence            455666666666666676766544 4555544 77788888888888888888773 45667777777888888888888


Q ss_pred             cHHHHHHHHhC-CCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy11819        474 YYEIAVLLLNS-GAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP  552 (651)
Q Consensus       474 ~~~~~~~Ll~~-g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~  552 (651)
                      +.++++.|+.+ |+|+|..+..|.|+||+|+..|..++.++|+++|+.++++|..|.||||.|+.-|+++++++|+..|+
T Consensus        84 ~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a  163 (226)
T KOG4412|consen   84 NDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGA  163 (226)
T ss_pred             cHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCC
Confidence            88888888777 77788777778888888888888888888888887777778888888888888888888888888887


Q ss_pred             CccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q psy11819        553 DLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMR  603 (651)
Q Consensus       553 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~  603 (651)
                      .+|..|+.|+||||.|.-.|+.++..+|+++||+++..|+.| ||+..|..
T Consensus       164 ~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~~  213 (226)
T KOG4412|consen  164 PLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIACN  213 (226)
T ss_pred             CCCcccccCccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHHHHH
Confidence            788888888888888877777778888888888877777766 77766654

>KOG4412|consensus

Probab=100.00  E-value=2e-37  Score=242.14  Aligned_cols=207  Identities=30%  Similarity=0.365  Sum_probs=190.7

Q ss_pred             ChHHHHHHhcCcHHHHHHHHhcCC-CCCCCCC-CCCcHHHHHHHcCcHHHHHHHH-hCCCCCcccCCCCCcHHHHHHhcC
Q psy11819        430 WTPLLVATLGNFTEVVELLLEYKP-NVNALDK-DGCTALTIACKDGYYEIAVLLL-NSGAYINIQDRSGDSNLIHAVKGG  506 (651)
Q Consensus       430 ~t~l~~a~~~~~~~~~~~Ll~~~~-~~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~~~t~l~~A~~~~  506 (651)
                      .++.+.++......-++.+++... ..+.++. +|+||||.|+..|+.+++.+|+ +-+..++-+|..|.||||+|+..|
T Consensus         4 ~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g   83 (226)
T KOG4412|consen    4 ASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNG   83 (226)
T ss_pred             cchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcC
Confidence            456666777777777777777655 5666666 9999999999999999999999 567888899999999999999999


Q ss_pred             cHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q psy11819        507 HRGIVEALLKK-YVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKA  585 (651)
Q Consensus       507 ~~~~v~~Ll~~-~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga  585 (651)
                      +.++|+.|+.+ |++++..+..|.|+||+|+..|..+++++|+++|+.++++|..|.||||.|+..|+++++++|+..|+
T Consensus        84 ~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a  163 (226)
T KOG4412|consen   84 NDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGA  163 (226)
T ss_pred             cHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCC
Confidence            99999999998 99999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccc
Q psy11819        586 KITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNN  640 (651)
Q Consensus       586 ~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~  640 (651)
                      .++..|+.|+||||.|.-.++.++...|+++|++   .++.|+.| ||+.+|...
T Consensus       164 ~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd---~~~edke~-t~~~~a~~~  214 (226)
T KOG4412|consen  164 PLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGAD---TDREDKEG-TALRIACNE  214 (226)
T ss_pred             CCCcccccCccHHHHHHhccCchHHHHHHHhccc---eeeccccC-chHHHHHHH
Confidence            9999999999999999999999999999999999   88899988 998887654

>PHA02798 ankyrin-like protein; Provisional

Probab=100.00  E-value=7.7e-36  Score=302.36  Aligned_cols=281  Identities=22%  Similarity=0.243  Sum_probs=236.2

Q ss_pred             CHHHHHHHHHcCCCCCCCCCCCchHHHHHHH--cCCHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhc-----ChHHHHHH
Q psy11819        202 YTDVCAELLDHGADLEHRDMGGWSPLMWASY--KGHTDTVALLLDKNADVNAHGNYHISSLIWAAGR-----GYTEIVAL  274 (651)
Q Consensus       202 ~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~--~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~-----~~~~~v~~  274 (651)
                      ..++|+.|++.+ +++.. ..+.|+++.+..  .++.+++++|+++|++++..+..|.|||+.++..     +..+++++
T Consensus        17 ~~~~v~~ll~~~-~~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~   94 (489)
T PHA02798         17 KLSTVKLLIKSC-NPNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKI   94 (489)
T ss_pred             cHHHHHHHHhcC-Chhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHH
Confidence            468999999765 33333 346677664443  3478999999999999999999999999988764     67899999


Q ss_pred             HHHcCCCCCCCCCCCCCCHHHHHHHcC---CHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhc
Q psy11819        275 LVKKGAKVNVGDKVYGTTPLVWACRKG---HVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYA  351 (651)
Q Consensus       275 L~~~~~~~~~~~~~~~~~~l~~a~~~~---~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (651)
                      |+++|++++..+. .|.||||+|+..+   +.+++++|+++|++++..+                               
T Consensus        95 Ll~~GadiN~~d~-~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d-------------------------------  142 (489)
T PHA02798         95 LIENGADINKKNS-DGETPLYCLLSNGYINNLEILLFMIENGADTTLLD-------------------------------  142 (489)
T ss_pred             HHHCCCCCCCCCC-CcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccC-------------------------------
Confidence            9999999998887 7999999999986   6899999999999887543                               


Q ss_pred             ccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHHcCC---HHHHHHHHHcCCCCCCcC-c
Q psy11819        352 KWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGH---VEIVDILLKAGANVDVAG-L  427 (651)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~---~~~v~~Ll~~~~~~~~~~-~  427 (651)
                                                                ..|.||||.|+..++   .+++++|++.|++++..+ .
T Consensus       143 ------------------------------------------~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~  180 (489)
T PHA02798        143 ------------------------------------------KDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNK  180 (489)
T ss_pred             ------------------------------------------CCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCc
Confidence                                                      568899999999887   899999999999998774 4


Q ss_pred             CCChHHHHHHhc----CcHHHHHHHHhcCCCCCCCCCCCCcHHH-------HHHHcCcHHHHHHHHhCCCCCcccCCCCC
Q psy11819        428 YCWTPLLVATLG----NFTEVVELLLEYKPNVNALDKDGCTALT-------IACKDGYYEIAVLLLNSGAYINIQDRSGD  496 (651)
Q Consensus       428 ~~~t~l~~a~~~----~~~~~~~~Ll~~~~~~~~~~~~g~t~l~-------~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~  496 (651)
                      .+.||+|.++..    ++.+++++|+++|++++..+..+.++++       .+...+..+++++|+. +++++.+|..|.
T Consensus       181 ~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~dvN~~d~~G~  259 (489)
T PHA02798        181 EKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YIDINQVDELGF  259 (489)
T ss_pred             CCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCCCCCcCcCCc
Confidence            688999988654    4789999999999999888888888876       2345567788888766 589999999999


Q ss_pred             cHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCC
Q psy11819        497 SNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATK  559 (651)
Q Consensus       497 t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~  559 (651)
                      ||||+|+..++.+++++|+++|++++..+..|.|||+.|+.+++.++++.|++.+++++..+.
T Consensus       260 TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~~i~~  322 (489)
T PHA02798        260 NPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNKNTISY  322 (489)
T ss_pred             cHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999998876544

>KOG0509|consensus

Probab=100.00  E-value=1.3e-32  Score=260.17  Aligned_cols=208  Identities=29%  Similarity=0.375  Sum_probs=199.5

Q ss_pred             ChHHHHHHHcCCHHHHHHHHHc-CCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHcCc
Q psy11819        397 TTPLVWACRKGHVEIVDILLKA-GANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD-KDGCTALTIACKDGY  474 (651)
Q Consensus       397 ~t~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~g~t~l~~A~~~~~  474 (651)
                      ...+..|+++|.++-++.|++. |.+++..|.+|.++||.|+.+++++++++|+++|+++|... .-+.||||.|+++|+
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~  124 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGH  124 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCc
Confidence            4667889999999999999998 99999999999999999999999999999999999999988 678899999999999


Q ss_pred             HHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCc
Q psy11819        475 YEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDL  554 (651)
Q Consensus       475 ~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~  554 (651)
                      +.++++|+++|+|++.+|.+|.+|+|.|+..++.-++-+|+.+|+++|.+|.+|+||||+|+.+|....+..|+..|+.+
T Consensus       125 ~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~  204 (600)
T KOG0509|consen  125 ISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASL  204 (600)
T ss_pred             HHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999988899999999999


Q ss_pred             cccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Q psy11819        555 EIAT-KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRA  604 (651)
Q Consensus       555 ~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~  604 (651)
                      +..| ..|.||||+|+..|+..++++|++.|++.+.+|.+|.||+.+|...
T Consensus       205 ~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  205 LLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             cccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence            9888 8999999999999999999977778899999999999999999876

>KOG0509|consensus

Probab=100.00  E-value=3.1e-32  Score=257.57  Aligned_cols=208  Identities=26%  Similarity=0.370  Sum_probs=197.0

Q ss_pred             ChHHHHHHhcCcHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccC-CCCCcHHHHHHhcCc
Q psy11819        430 WTPLLVATLGNFTEVVELLLEY-KPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD-RSGDSNLIHAVKGGH  507 (651)
Q Consensus       430 ~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~t~l~~A~~~~~  507 (651)
                      ...+..|++.|.++-++.|++. |.+++..|.+|.|+||.|+.+++++++++|+++|+++|... .-+.||||.|+++|+
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~  124 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGH  124 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCc
Confidence            3467789999999999999998 99999999999999999999999999999999999999998 567899999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q psy11819        508 RGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKI  587 (651)
Q Consensus       508 ~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~  587 (651)
                      ..++++|+++|++++.+|.+|.+++|.|++.++.-+|-||+.+|+|++.+|.+|+||||+|+.+|+...++.|+.-|+.+
T Consensus       125 ~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~  204 (600)
T KOG0509|consen  125 ISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASL  204 (600)
T ss_pred             HHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999988899999999999


Q ss_pred             cccC-CCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccc
Q psy11819        588 TAVD-KRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNN  640 (651)
Q Consensus       588 ~~~d-~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~  640 (651)
                      ..+| +.|.||||.|+-.|+..++..|++.+++   .+.+|..|+||+.+|.+.
T Consensus       205 ~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~---~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  205 LLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGAD---LDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             cccccccCCchHHHHHhcCCcceEehhhhcCCc---ccccccCCCCHHHHHHHh
Confidence            9998 9999999999999999999966666666   888999999999999776

>PHA02795 ankyrin-like protein; Provisional

Probab=99.97  E-value=1.9e-30  Score=244.91  Aligned_cols=202  Identities=17%  Similarity=0.173  Sum_probs=170.8

Q ss_pred             HHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCC------CCCCCCCcHHHHHHH--cCcHHHHHHHH
Q psy11819        411 IVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVN------ALDKDGCTALTIACK--DGYYEIAVLLL  482 (651)
Q Consensus       411 ~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~------~~~~~g~t~l~~A~~--~~~~~~~~~Ll  482 (651)
                      +.++++.+|++++.....+     +|+..+..+++++|+.+|++++      ..+..++|+||+++.  .|+.+++++|+
T Consensus        64 ~~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI  138 (437)
T PHA02795         64 LYDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMV  138 (437)
T ss_pred             HHHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHH
Confidence            3578888888888776665     7888888999999999998877      567778899999988  88899999999


Q ss_pred             hCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCC------CCCCCCHHHHHHHcCCHHHHHHHHhcCCCccc
Q psy11819        483 NSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIP------GKERKTAVYTAVEKGNVPILKLLLTANPDLEI  556 (651)
Q Consensus       483 ~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~------~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~  556 (651)
                      ++|++++..+  +.||+|.|+..++.+++++|+++|++....      +..+.+++|.|+..++.+++++|+++|+++|.
T Consensus       139 ~~GADIn~~~--~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~  216 (437)
T PHA02795        139 DHGAVIYKIE--CLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQ  216 (437)
T ss_pred             HCCCCCCCCC--CCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCc
Confidence            9999888743  478999999999999999999998743222      13467888889999999999999999999999


Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC--------hHHHHHHHhCCCC
Q psy11819        557 ATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARS--------KTIVEVFIRNPKN  619 (651)
Q Consensus       557 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~--------~~~~~~Ll~~~~~  619 (651)
                      +|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+        .+++++|+++++.
T Consensus       217 kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gad  287 (437)
T PHA02795        217 LDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLS  287 (437)
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999999999999999999998884        5899999988876

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.97  E-value=1.1e-29  Score=224.31  Aligned_cols=173  Identities=16%  Similarity=0.191  Sum_probs=92.2

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcC--cHHHHHHHHhcCCCCCCCC-CCCCCHHHHHHHc
Q psy11819        462 GCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGG--HRGIVEALLKKYVDVDIPG-KERKTAVYTAVEK  538 (651)
Q Consensus       462 g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~--~~~~v~~Ll~~~~~~~~~~-~~g~t~l~~A~~~  538 (651)
                      +.|||+.|++.|+.+.++.|++.   ++..+..|.||||.|+..+  +.+++++|+++|++++.++ ..|.||||+|+..
T Consensus        21 ~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~   97 (209)
T PHA02859         21 YCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSF   97 (209)
T ss_pred             cCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHh
Confidence            34555555555555555555543   2334455555555555432  4555555555555555554 2455555555432


Q ss_pred             ---CCHHHHHHHHhcCCCccccCCCCCcHHHHHHH--cCCHHHHHHHHHcCCCCcccCCCCCcHHHH-HHHcCChHHHHH
Q psy11819        539 ---GNVPILKLLLTANPDLEIATKDGDTPLLKAVK--TRNLEAIQMLIDKKAKITAVDKRGDTVLHI-AMRARSKTIVEV  612 (651)
Q Consensus       539 ---~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~--~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~-A~~~~~~~~~~~  612 (651)
                         ++.+++++|+++|+++|.+|..|+||||+|+.  .++.+++++|++.|++++.+|..|.||||. |+..++.+++++
T Consensus        98 ~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~  177 (209)
T PHA02859         98 NKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDF  177 (209)
T ss_pred             CccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHH
Confidence               24555555555555555555555555555543  234555555555555555555555555553 334455555555


Q ss_pred             HHhCCCCcccccCCCCCCCCcccccccc
Q psy11819        613 FIRNPKNNILLYRPNKAGETPYSIDMNN  640 (651)
Q Consensus       613 Ll~~~~~~~~~~~~~~~g~t~l~~a~~~  640 (651)
                      |+++|.+   ++.+|..|+||||+|...
T Consensus       178 Ll~~Gad---i~~~d~~g~tpl~la~~~  202 (209)
T PHA02859        178 LTSLGID---INETNKSGYNCYDLIKFR  202 (209)
T ss_pred             HHHcCCC---CCCCCCCCCCHHHHHhhh
Confidence            5555554   445555555555555543

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.97  E-value=3.7e-29  Score=221.04  Aligned_cols=175  Identities=16%  Similarity=0.157  Sum_probs=143.1

Q ss_pred             CCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC--cHHHHHHHHhCCCCCcccC-CCCCcHHHHHHh
Q psy11819        428 YCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDG--YYEIAVLLLNSGAYINIQD-RSGDSNLIHAVK  504 (651)
Q Consensus       428 ~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~--~~~~~~~Ll~~g~~~~~~~-~~~~t~l~~A~~  504 (651)
                      .+++||+.|+..++.+.++.|++.   ++..+..|.||||+|+..+  +.+++++|+++|++++.++ ..|.||||.|+.
T Consensus        20 ~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~   96 (209)
T PHA02859         20 RYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLS   96 (209)
T ss_pred             ccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHH
Confidence            345677777777777777777764   3456777888888888754  7888888888888888876 478888888765


Q ss_pred             c---CcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH--cCCHHHHHHHHhcCCCccccCCCCCcHHHH-HHHcCCHHHHH
Q psy11819        505 G---GHRGIVEALLKKYVDVDIPGKERKTAVYTAVE--KGNVPILKLLLTANPDLEIATKDGDTPLLK-AVKTRNLEAIQ  578 (651)
Q Consensus       505 ~---~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~--~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~-A~~~~~~~~v~  578 (651)
                      .   ++.+++++|+++|++++.++..|.||||+|+.  .++.+++++|++.|++++.+|..|.||||. |+..++.++++
T Consensus        97 ~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~  176 (209)
T PHA02859         97 FNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFD  176 (209)
T ss_pred             hCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHH
Confidence            3   46888999999899999888899999998875  467899999999999999999999999995 56678899999


Q ss_pred             HHHHcCCCCcccCCCCCcHHHHHHHcC
Q psy11819        579 MLIDKKAKITAVDKRGDTVLHIAMRAR  605 (651)
Q Consensus       579 ~Ll~~ga~~~~~d~~g~t~l~~A~~~~  605 (651)
                      +|+++|++++.+|..|.|||++|+.++
T Consensus       177 ~Ll~~Gadi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        177 FLTSLGIDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             HHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence            999999999999999999999998754

>PHA02795 ankyrin-like protein; Provisional

Probab=99.97  E-value=6.5e-29  Score=234.52  Aligned_cols=209  Identities=13%  Similarity=0.097  Sum_probs=179.1

Q ss_pred             HHHHcCCHHHHHHHHHcCCCCC------CcCcCCChHHHHHHh--cCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q psy11819        402 WACRKGHVEIVDILLKAGANVD------VAGLYCWTPLLVATL--GNFTEVVELLLEYKPNVNALDKDGCTALTIACKDG  473 (651)
Q Consensus       402 ~A~~~~~~~~v~~Ll~~~~~~~------~~~~~~~t~l~~a~~--~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~  473 (651)
                      .|+..+..+++++|+.+|++++      ..+...+|+||+++.  .++.+++++|+++|++++..  ++.||+|.|+..+
T Consensus        83 ~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~~  160 (437)
T PHA02795         83 LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICKK  160 (437)
T ss_pred             HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHcC
Confidence            7889999999999999999988      667789999999999  89999999999999999874  4589999999999


Q ss_pred             cHHHHHHHHhCCCCCcccC------CCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q psy11819        474 YYEIAVLLLNSGAYINIQD------RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLL  547 (651)
Q Consensus       474 ~~~~~~~Ll~~g~~~~~~~------~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L  547 (651)
                      +.+++++|+++|++.....      ..+.+++|.|...++.+++++|+++|++++.++..|.||||+|+..|+.+++++|
T Consensus       161 ~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelL  240 (437)
T PHA02795        161 ESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWL  240 (437)
T ss_pred             cHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHH
Confidence            9999999999998543222      3467899999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCccccCCCCCcHHHHHHHcCC--------HHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCC
Q psy11819        548 LTANPDLEIATKDGDTPLLKAVKTRN--------LEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNP  617 (651)
Q Consensus       548 l~~~~~~~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~  617 (651)
                      +++|++++.+|..|+||||+|+..|+        .+++++|+++|++++..+..+   +..  ...+.++++.+++..
T Consensus       241 L~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~~~~---~~~--~~~n~~~ik~lI~y~  313 (437)
T PHA02795        241 LENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIKLAI---LNN--TIENHDVIKLCIKYF  313 (437)
T ss_pred             HHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchhHHh---hhc--ccchHHHHHHHHHHH
Confidence            99999999999999999999999984        699999999999988654322   111  112456666655443

>KOG4369|consensus

Probab=99.96  E-value=7.2e-30  Score=252.55  Aligned_cols=326  Identities=29%  Similarity=0.370  Sum_probs=297.7

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCC-CCCCchHHHHHH
Q psy11819        153 RDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHR-DMGGWSPLMWAS  231 (651)
Q Consensus       153 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~-~~~~~t~L~~A~  231 (651)
                      ...+-.|+|..||..|+.|+|++|+.+|+++.-+|..|.+||..|+-.||..+|+.|+.+.++++.. |..+.|+|-+|+
T Consensus       753 Te~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlac  832 (2131)
T KOG4369|consen  753 TEPNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLAC  832 (2131)
T ss_pred             cCccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEec
Confidence            3456778999999999999999999999999999999999999999999999999999999888764 667899999999


Q ss_pred             HcCCHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHHHHHHHHcCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHH
Q psy11819        232 YKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDK-VYGTTPLVWACRKGHVEIVDILL  310 (651)
Q Consensus       232 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~v~~L~~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~v~~Ll  310 (651)
                      ..|+.++|++|+..|++...++....|||-+|...|..+++..|+..|.+++.... ..|..||..|..+|+.+.++.|+
T Consensus       833 sggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll  912 (2131)
T KOG4369|consen  833 SGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLL  912 (2131)
T ss_pred             CCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHh
Confidence            99999999999999999988888889999999999999999999999988876432 35889999999999999999999


Q ss_pred             HcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHH
Q psy11819        311 KAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLV  390 (651)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (651)
                      +.|.++|..-.                                                                     
T Consensus       913 ~~gsdiNaqIe---------------------------------------------------------------------  923 (2131)
T KOG4369|consen  913 QPGSDINAQIE---------------------------------------------------------------------  923 (2131)
T ss_pred             cccchhccccc---------------------------------------------------------------------
Confidence            99988875421                                                                     


Q ss_pred             hhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCC--CCCCcHHHH
Q psy11819        391 MHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD--KDGCTALTI  468 (651)
Q Consensus       391 ~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~--~~g~t~l~~  468 (651)
                         .+..|+|-.|+..|+.+++..|+...+++..+-..|.|||+.++..|.+++=.+|+..|+|++..-  ....|+|.+
T Consensus       924 ---TNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti 1000 (2131)
T KOG4369|consen  924 ---TNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTI 1000 (2131)
T ss_pred             ---cccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCcccee
Confidence               335689999999999999999999999999999999999999999999999999999999987643  345689999


Q ss_pred             HHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q psy11819        469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLL  548 (651)
Q Consensus       469 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll  548 (651)
                      ++..|+...++.|+...+.+...+..|+|+|+.|+..|+...++.|++++++++..|....++++.|.++|+.+||++.+
T Consensus      1001 ~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qdnr~~S~~maafRKgh~~iVk~mv 1080 (2131)
T KOG4369|consen 1001 PANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQDNRTNSRTMAAFRKGHFAIVKKMV 1080 (2131)
T ss_pred             ecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhhhcccccccHHHHHhchhheecccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999986


Q ss_pred             hc
Q psy11819        549 TA  550 (651)
Q Consensus       549 ~~  550 (651)
                      ..
T Consensus      1081 ~~ 1082 (2131)
T KOG4369|consen 1081 PP 1082 (2131)
T ss_pred             Cc
Confidence            64

>KOG4369|consensus

Probab=99.96  E-value=1.8e-29  Score=249.70  Aligned_cols=322  Identities=26%  Similarity=0.339  Sum_probs=289.4

Q ss_pred             CCchHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC
Q psy11819        222 GGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKG  301 (651)
Q Consensus       222 ~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~  301 (651)
                      .-.|+|-.|+..||.|.+++|+.+|+++..++..|.+||..|+..|+..+|+.|++.-++++...+..+.|+|.+||..|
T Consensus       756 n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsgg  835 (2131)
T KOG4369|consen  756 NIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGG  835 (2131)
T ss_pred             cccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCC
Confidence            34678999999999999999999999999999999999999999999999999999999998877778999999999999


Q ss_pred             CHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCCCCccc
Q psy11819        302 HVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFT  381 (651)
Q Consensus       302 ~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (651)
                      +.++++.|+..|++-.-++                                                             
T Consensus       836 r~~vvelLl~~gankehrn-------------------------------------------------------------  854 (2131)
T KOG4369|consen  836 RTRVVELLLNAGANKEHRN-------------------------------------------------------------  854 (2131)
T ss_pred             cchHHHHHHHhhccccccc-------------------------------------------------------------
Confidence            9999999999988644322                                                             


Q ss_pred             hhhhHHHHHhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCc--CcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCC-
Q psy11819        382 FSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVA--GLYCWTPLLVATLGNFTEVVELLLEYKPNVNAL-  458 (651)
Q Consensus       382 ~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~--~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~-  458 (651)
                                  -...|||..|..-|..++++.|+..|.+++.+  .+.|-.||+.|..+++...++.|++.|.|+|.. 
T Consensus       855 ------------vsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqI  922 (2131)
T KOG4369|consen  855 ------------VSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQI  922 (2131)
T ss_pred             ------------hhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhcccc
Confidence                        22458999999999999999999999888766  457889999999999999999999999988764 


Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCC--CCCCCCHHHHHH
Q psy11819        459 DKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIP--GKERKTAVYTAV  536 (651)
Q Consensus       459 ~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~--~~~g~t~l~~A~  536 (651)
                      ..+-.|+|-+|+..|..+++.+|+...+.+.++-..|-|||+-++..|++++=..|+..|+|.+..  -....|+|-+++
T Consensus       923 eTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a 1002 (2131)
T KOG4369|consen  923 ETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPA 1002 (2131)
T ss_pred             ccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeec
Confidence            346678999999999999999999999999999999999999999999999999999999988753  234568999999


Q ss_pred             HcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhC
Q psy11819        537 EKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN  616 (651)
Q Consensus       537 ~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~  616 (651)
                      ..|+.+.++.|+...+.+.+++++|.|+|..|+.-|.+..+..|++++++++..|....++++-|.++|+++||++.+..
T Consensus      1003 ~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qdnr~~S~~maafRKgh~~iVk~mv~~ 1082 (2131)
T KOG4369|consen 1003 NKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQDNRTNSRTMAAFRKGHFAIVKKMVPP 1082 (2131)
T ss_pred             CCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhhhcccccccHHHHHhchhheeccccCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999887644

>KOG0502|consensus

Probab=99.95  E-value=8.4e-28  Score=194.67  Aligned_cols=237  Identities=26%  Similarity=0.336  Sum_probs=209.6

Q ss_pred             cCCCChHHHHHHHcCCHHHHHHHHHcCCC-CCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q psy11819        393 LSYGTTPLVWACRKGHVEIVDILLKAGAN-VDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACK  471 (651)
Q Consensus       393 ~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~  471 (651)
                      +..|...+..+...++.++....+....+ +...+..|+.+++.++-.++...+..++.+|...+..+.-+.+|+..++.
T Consensus        59 ~~lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVh  138 (296)
T KOG0502|consen   59 NALGESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVH  138 (296)
T ss_pred             HhcCCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHH
Confidence            34466667778888888888777655332 34456779999999999999999999999999999999999999999999


Q ss_pred             cCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy11819        472 DGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN  551 (651)
Q Consensus       472 ~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~  551 (651)
                      .-+.+.+..+.++  -+|..|..|.|||..|+..|++.+|++|++.|++++...+...++|..|++.|..++|++|++++
T Consensus       139 ql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~  216 (296)
T KOG0502|consen  139 QLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTRE  216 (296)
T ss_pred             HHHHHHHHHHhhc--cccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcC
Confidence            8888888777765  45899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCC
Q psy11819        552 PDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGE  631 (651)
Q Consensus       552 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~  631 (651)
                      +|+|..|.+|-|||.||++-++.+|++.|++.||+++..+..|.+++..|+..|+. +|+..+++-..   ..-+|...+
T Consensus       217 vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~l---kl~Q~~~~~  292 (296)
T KOG0502|consen  217 VDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKHAL---KLCQDSEKR  292 (296)
T ss_pred             CCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHHHHHH---HHhhcccCC
Confidence            99999999999999999999999999999999999999999999999999999988 88888777665   334777788


Q ss_pred             Cccc
Q psy11819        632 TPYS  635 (651)
Q Consensus       632 t~l~  635 (651)
                      ||+|
T Consensus       293 ~~~~  296 (296)
T KOG0502|consen  293 TPLH  296 (296)
T ss_pred             CCCC
Confidence            8876

>KOG0502|consensus

Probab=99.94  E-value=2.5e-27  Score=191.92  Aligned_cols=203  Identities=31%  Similarity=0.354  Sum_probs=188.6

Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q psy11819        394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDG  473 (651)
Q Consensus       394 ~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~  473 (651)
                      ..|.++++.+...++...+..++.+|...|..+..+++|++.++...+++.+..+.++  .+|..|..|.|||..|+..|
T Consensus        94 p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~G  171 (296)
T KOG0502|consen   94 PEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAKG  171 (296)
T ss_pred             chhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHHHHHHHHhhc--cccCccccCchHhHHHHhcC
Confidence            4477889999999999999999999999999999999999999999888888777665  57889999999999999999


Q ss_pred             cHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q psy11819        474 YYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPD  553 (651)
Q Consensus       474 ~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~  553 (651)
                      +++++++|++.|++++...+...++|..|.+.|..++|++|+.+++++|..|.+|-|||.+|++.++.++++.|++.|++
T Consensus       172 ~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd  251 (296)
T KOG0502|consen  172 HIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGAD  251 (296)
T ss_pred             chHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHH
Q psy11819        554 LEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLH  599 (651)
Q Consensus       554 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~  599 (651)
                      ++..+..|++++..|+..|.. +|+..+++-+.....|...++|+|
T Consensus       252 ~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  252 VTQEDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQDSEKRTPLH  296 (296)
T ss_pred             cccccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhcccCCCCCC
Confidence            999999999999999999988 899999987777777777676654

>KOG0507|consensus

Probab=99.94  E-value=4.5e-26  Score=218.65  Aligned_cols=241  Identities=25%  Similarity=0.302  Sum_probs=208.1

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcC-------------CCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCc
Q psy11819        398 TPLVWACRKGHVEIVDILLKAG-------------ANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCT  464 (651)
Q Consensus       398 t~l~~A~~~~~~~~v~~Ll~~~-------------~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t  464 (651)
                      +-+..|++.|+.+.+..|++..             .+.+..|..+.|+||.|+.+++.++++.|+++.+-++..+..|.+
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~   84 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGIL   84 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcc
Confidence            4567889999999999998751             234566778999999999999999999999998888888899999


Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Q psy11819        465 ALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPIL  544 (651)
Q Consensus       465 ~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v  544 (651)
                      |||+|+..|+.++++.++..+..+|.....|.||||.|+.+||.+++.+|+.++.++-+.+..+.|+|..|++.|..+++
T Consensus        85 plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vv  164 (854)
T KOG0507|consen   85 PLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVV  164 (854)
T ss_pred             eEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHH
Confidence            99999999999999999999988889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCC--------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhC
Q psy11819        545 KLLLTANPD--------LEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN  616 (651)
Q Consensus       545 ~~Ll~~~~~--------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~  616 (651)
                      +.|+....+        ...++-.+.+|||.|+++|+.++++.|++.|.+++...+. .|+||.|+-+|..++|++|++-
T Consensus       165 q~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~-gtalheaalcgk~evvr~ll~~  243 (854)
T KOG0507|consen  165 QMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTED-GTALHEAALCGKAEVVRFLLEI  243 (854)
T ss_pred             HHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCccccccc-chhhhhHhhcCcchhhhHHHhh
Confidence            999887432        1234456788999999999999999999999999876544 5889999999999999999999


Q ss_pred             CCCcccccCCCCCCCCcccccccccc
Q psy11819        617 PKNNILLYRPNKAGETPYSIDMNNQK  642 (651)
Q Consensus       617 ~~~~~~~~~~~~~g~t~l~~a~~~~~  642 (651)
                      |..   ..++|..|+|+|++-...+.
T Consensus       244 gin---~h~~n~~~qtaldil~d~~~  266 (854)
T KOG0507|consen  244 GIN---THIKNQHGQTALDIIIDLQE  266 (854)
T ss_pred             ccc---cccccccchHHHHHHHhcch
Confidence            887   67799999999987665443

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.93  E-value=1.9e-24  Score=231.60  Aligned_cols=193  Identities=21%  Similarity=0.287  Sum_probs=149.2

Q ss_pred             CHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy11819        408 HVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAY  487 (651)
Q Consensus       408 ~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~  487 (651)
                      ..++-..+.+.+..  ..+....++|+.|+..|+.++++.|++.|++++..|..|.||||+|+..|+.+++++|+++|++
T Consensus       506 ~l~v~~ll~~~~~~--~~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gad  583 (823)
T PLN03192        506 DLNVGDLLGDNGGE--HDDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACN  583 (823)
T ss_pred             cccHHHHHhhcccc--cCCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCC
Confidence            33444444444332  1233456778888888888888888888888888888888888888888888888888888888


Q ss_pred             CcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHH
Q psy11819        488 INIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLK  567 (651)
Q Consensus       488 ~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~  567 (651)
                      ++.+|.+|.||||.|+..|+.+++++|++.+...+  ...+.++||.|+..|+.+++++|+++|+++|.+|.+|+||||+
T Consensus       584 in~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~  661 (823)
T PLN03192        584 VHIRDANGNTALWNAISAKHHKIFRILYHFASISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQV  661 (823)
T ss_pred             CCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccC--cccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence            88888888888888888888888888887665443  2446678888888888888888888888888888888888888


Q ss_pred             HHHcCCHHHHHHHHHcCCCCcccCCCC-CcHHHHHHHc
Q psy11819        568 AVKTRNLEAIQMLIDKKAKITAVDKRG-DTVLHIAMRA  604 (651)
Q Consensus       568 A~~~~~~~~v~~Ll~~ga~~~~~d~~g-~t~l~~A~~~  604 (651)
                      |+..|+.+++++|+++|++++..|..| .||++.+...
T Consensus       662 A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~~  699 (823)
T PLN03192        662 AMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELRELL  699 (823)
T ss_pred             HHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Confidence            888888888888888888888888777 7777776543

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.93  E-value=2.6e-24  Score=230.50  Aligned_cols=194  Identities=22%  Similarity=0.255  Sum_probs=162.2

Q ss_pred             cHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCC
Q psy11819        441 FTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVD  520 (651)
Q Consensus       441 ~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~  520 (651)
                      ..++-..+.+.+...  .+.++.++|+.|+..|+.++++.|++.|++++..|..|.||||+|+..|+.+++++|+++|++
T Consensus       506 ~l~v~~ll~~~~~~~--~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gad  583 (823)
T PLN03192        506 DLNVGDLLGDNGGEH--DDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACN  583 (823)
T ss_pred             cccHHHHHhhccccc--CCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCC
Confidence            334455566555432  334567889999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHH
Q psy11819        521 VDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHI  600 (651)
Q Consensus       521 ~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~  600 (651)
                      ++.+|.+|.||||.|+..|+.+++++|++.+...+  ...+.++||.|+.+|+.+++++|+++|++++.+|..|.||||+
T Consensus       584 in~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~  661 (823)
T PLN03192        584 VHIRDANGNTALWNAISAKHHKIFRILYHFASISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQV  661 (823)
T ss_pred             CCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccC--cccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence            99999999999999999999999999988776544  3456789999999999999999999999999999999999999


Q ss_pred             HHHcCChHHHHHHHhCCCCcccccCCCCCC-CCccccccccc
Q psy11819        601 AMRARSKTIVEVFIRNPKNNILLYRPNKAG-ETPYSIDMNNQ  641 (651)
Q Consensus       601 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g-~t~l~~a~~~~  641 (651)
                      |+..|+.+++++|+++|++   ++.+|..| .||++++-..+
T Consensus       662 A~~~g~~~iv~~Ll~~GAd---v~~~~~~g~~t~~~l~~~~~  700 (823)
T PLN03192        662 AMAEDHVDMVRLLIMNGAD---VDKANTDDDFSPTELRELLQ  700 (823)
T ss_pred             HHHCCcHHHHHHHHHcCCC---CCCCCCCCCCCHHHHHHHHH
Confidence            9999999999999999988   67788888 88888765443

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.92  E-value=6.3e-25  Score=234.51  Aligned_cols=237  Identities=19%  Similarity=0.126  Sum_probs=186.0

Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHc--CCCCCCcCcCCChHHH-HHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q psy11819        394 SYGTTPLVWACRKGHVEIVDILLKA--GANVDVAGLYCWTPLL-VATLGNFTEVVELLLEYKPNVNALDKDGCTALTIAC  470 (651)
Q Consensus       394 ~~~~t~l~~A~~~~~~~~v~~Ll~~--~~~~~~~~~~~~t~l~-~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~  470 (651)
                      ..+...+..|++.|+.+.++.+++.  +.++|..|..|.|||| .|+.+++.++++.|+++|.    .+..|.||||.|+
T Consensus        15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~   90 (743)
T TIGR00870        15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAIS   90 (743)
T ss_pred             CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHH
Confidence            4567889999999999999999998  8899999999999999 8888999999999999887    5678999999998


Q ss_pred             HcC---cHHHHHHHHhCCCC------Cc----ccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCC------------
Q psy11819        471 KDG---YYEIAVLLLNSGAY------IN----IQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPG------------  525 (651)
Q Consensus       471 ~~~---~~~~~~~Ll~~g~~------~~----~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~------------  525 (651)
                      ..+   ...++..+.+.+.+      ++    .....|.||||.|+..|+.+++++|+++|++++..+            
T Consensus        91 ~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~  170 (743)
T TIGR00870        91 LEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVD  170 (743)
T ss_pred             hccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCC
Confidence            732   22344444443321      11    112468899999999999999999999999888543            


Q ss_pred             --CCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcC---------CHHHHHHHHHcCCCC-------
Q psy11819        526 --KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTR---------NLEAIQMLIDKKAKI-------  587 (651)
Q Consensus       526 --~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~---------~~~~v~~Ll~~ga~~-------  587 (651)
                        ..|.+|||.|+..++.+++++|++.|+|++..|..|+||||+|+..+         ...+.+++++.++..       
T Consensus       171 ~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~  250 (743)
T TIGR00870       171 SFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELE  250 (743)
T ss_pred             cccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhh
Confidence              24789999999999999999999999999999999999999999876         234666676665543       


Q ss_pred             cccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCccccc
Q psy11819        588 TAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSID  637 (651)
Q Consensus       588 ~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a  637 (651)
                      +..|..|.||||+|+..|+.+++++|++.+..   ..........|.+++
T Consensus       251 ~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~---~kk~~a~~~~~~~~~  297 (743)
T TIGR00870       251 VILNHQGLTPLKLAAKEGRIVLFRLKLAIKYK---QKKFVAWPNGQQLLS  297 (743)
T ss_pred             hhcCCCCCCchhhhhhcCCccHHHHHHHHHHh---cceeeccCcchHhHh
Confidence            55688999999999999999999999988766   233345555555543

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.92  E-value=8.7e-25  Score=233.47  Aligned_cols=218  Identities=23%  Similarity=0.197  Sum_probs=182.0

Q ss_pred             cCCChHHHHHHhcCcHHHHHHHHhc--CCCCCCCCCCCCcHHH-HHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHH
Q psy11819        427 LYCWTPLLVATLGNFTEVVELLLEY--KPNVNALDKDGCTALT-IACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAV  503 (651)
Q Consensus       427 ~~~~t~l~~a~~~~~~~~~~~Ll~~--~~~~~~~~~~g~t~l~-~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~  503 (651)
                      ..++.+++.|+..|+.+.++.+++.  +.+++..|..|.|||| .|+..++.++++.|+++|+    .+..|.||||.|+
T Consensus        15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~   90 (743)
T TIGR00870        15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAIS   90 (743)
T ss_pred             CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHH
Confidence            3567899999999999999999998  8899999999999999 8999999999999999987    6778999999998


Q ss_pred             hcC---cHHHHHHHHhcCCC------C----CCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccC------------
Q psy11819        504 KGG---HRGIVEALLKKYVD------V----DIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT------------  558 (651)
Q Consensus       504 ~~~---~~~~v~~Ll~~~~~------~----~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~------------  558 (651)
                      .++   ...++.++...+.+      .    ......|.||||+|+.+|+.+++++|+++|++++.++            
T Consensus        91 ~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~  170 (743)
T TIGR00870        91 LEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVD  170 (743)
T ss_pred             hccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCC
Confidence            732   22344444444322      1    1123569999999999999999999999999998653            


Q ss_pred             --CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC---------ChHHHHHHHhCCCCcccc----
Q psy11819        559 --KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRAR---------SKTIVEVFIRNPKNNILL----  623 (651)
Q Consensus       559 --~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~---------~~~~~~~Ll~~~~~~~~~----  623 (651)
                        ..|+||||.|+..|+.+++++|+++|++++..|..|+||||+|+..+         ...+.+++++.++.....    
T Consensus       171 ~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~  250 (743)
T TIGR00870       171 SFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELE  250 (743)
T ss_pred             cccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhh
Confidence              25899999999999999999999999999999999999999999886         234667777766553223    


Q ss_pred             cCCCCCCCCcccccccccchhhhhc
Q psy11819        624 YRPNKAGETPYSIDMNNQKSILAQE  648 (651)
Q Consensus       624 ~~~~~~g~t~l~~a~~~~~~~~~~~  648 (651)
                      .++|..|.||||+|.+.|+..+.+.
T Consensus       251 ~i~N~~g~TPL~~A~~~g~~~l~~l  275 (743)
T TIGR00870       251 VILNHQGLTPLKLAAKEGRIVLFRL  275 (743)
T ss_pred             hhcCCCCCCchhhhhhcCCccHHHH
Confidence            6789999999999999999887664

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG0507|consensus

Probab=99.92  E-value=6.7e-25  Score=210.68  Aligned_cols=227  Identities=25%  Similarity=0.273  Sum_probs=204.2

Q ss_pred             HhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q psy11819        390 VMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIA  469 (651)
Q Consensus       390 ~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A  469 (651)
                      +.++.+|.|+||.|+.+|+.++++.|++..+-++..+..+.+|||+|+..|+.+++++++.++..+|..+..|.||||.|
T Consensus        43 n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhla  122 (854)
T KOG0507|consen   43 NLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLA  122 (854)
T ss_pred             cccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchh
Confidence            34556799999999999999999999999988888899999999999999999999999999988899999999999999


Q ss_pred             HHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCC--------CCCCCCCCCHHHHHHHcCCH
Q psy11819        470 CKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDV--------DIPGKERKTAVYTAVEKGNV  541 (651)
Q Consensus       470 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~--------~~~~~~g~t~l~~A~~~~~~  541 (651)
                      +..|+.+++.+|+++|+++-..+..+.|++..|++.|..++++.|++.....        ...+-.+-++||.|+.+|+.
T Consensus       123 aqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~  202 (854)
T KOG0507|consen  123 AQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHV  202 (854)
T ss_pred             hhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchH
Confidence            9999999999999999999999999999999999999999999999863221        23345677999999999999


Q ss_pred             HHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC---ChHHHHHHHhCC
Q psy11819        542 PILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRAR---SKTIVEVFIRNP  617 (651)
Q Consensus       542 ~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~---~~~~~~~Ll~~~  617 (651)
                      ++++.|++.|.++|....+| |+||.|+..|..++|++|++.|.+.+++|.+|+|+|.+-...-   ..+++-++....
T Consensus       203 ~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~~~~~~~ei~ga~~~~~  280 (854)
T KOG0507|consen  203 ECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDLQENRRYEIAGAVKNFE  280 (854)
T ss_pred             HHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHHhcchhhhhhhhhhhhccc
Confidence            99999999999999988887 9999999999999999999999999999999999999887543   445555555443

>KOG0505|consensus

Probab=99.91  E-value=6.6e-24  Score=196.68  Aligned_cols=231  Identities=26%  Similarity=0.342  Sum_probs=160.3

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHH
Q psy11819        398 TPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEI  477 (651)
Q Consensus       398 t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~  477 (651)
                      -.+..|+..+..+-+..|+..|++++..+.+|.|++|.++...+.+|+++|+++|++++..|..|+||+|.|+..|+..+
T Consensus        42 a~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i  121 (527)
T KOG0505|consen   42 AVFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNI  121 (527)
T ss_pred             HHHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHH
Confidence            45677889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccc
Q psy11819        478 AVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKK-YVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEI  556 (651)
Q Consensus       478 ~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~  556 (651)
                      +++|+++|+++...+..|..|+..+...-..++++.-... |++++.-   .     .+-..-.++=+...+..|.+.++
T Consensus       122 ~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~---R-----~~~e~~ml~D~~q~l~~G~~~d~  193 (527)
T KOG0505|consen  122 VEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAA---R-----KAEEQTMLDDARQWLNAGAELDA  193 (527)
T ss_pred             HHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHH---h-----hhhHHHHHHHHHHHHhccccccc
Confidence            9999999999999998888887665555555444443331 2221100   0     00000011112222235555555


Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccc
Q psy11819        557 ATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSI  636 (651)
Q Consensus       557 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~  636 (651)
                      .+-.|.|+||.|+-+|-.++.++|++.|.+++..|.+|+||||.|+-+++.+++++|++++++   ++..+..|+||+++
T Consensus       194 ~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~---~d~~t~~g~~p~dv  270 (527)
T KOG0505|consen  194 RHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGAD---MDAKTKMGETPLDV  270 (527)
T ss_pred             cccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcc---cchhhhcCCCCccc
Confidence            554555666666666666666666666666666666666666666666666666666666555   55555566666555


Q ss_pred             ccc
Q psy11819        637 DMN  639 (651)
Q Consensus       637 a~~  639 (651)
                      |-+
T Consensus       271 ~de  273 (527)
T KOG0505|consen  271 ADE  273 (527)
T ss_pred             hhh
Confidence            543

>KOG0514|consensus

Probab=99.90  E-value=1.2e-23  Score=184.27  Aligned_cols=162  Identities=31%  Similarity=0.470  Sum_probs=142.6

Q ss_pred             CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCC-CCCcccCCCCCcHHHHHHh-----cCcHHHHHHHHhcCCCCCCC-CCC
Q psy11819        455 VNALDKDGCTALTIACKDGYYEIAVLLLNSG-AYINIQDRSGDSNLIHAVK-----GGHRGIVEALLKKYVDVDIP-GKE  527 (651)
Q Consensus       455 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~~t~l~~A~~-----~~~~~~v~~Ll~~~~~~~~~-~~~  527 (651)
                      +|..|.+|.|+|||++...++++|+.|++.| ++++..+.-|+||+++++.     ..+.++|+.|..-| ++|.+ ...
T Consensus       261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~  339 (452)
T KOG0514|consen  261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQH  339 (452)
T ss_pred             hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhh
Confidence            4567889999999999999999999999886 7889999999999998775     35667888888765 55554 346


Q ss_pred             CCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcCC
Q psy11819        528 RKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDK-KAKITAVDKRGDTVLHIAMRARS  606 (651)
Q Consensus       528 g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~~~  606 (651)
                      |+|+|+.|+..|+.++|+.||..|+|+|++|.+|-|+||+|+++|+.|+|++||.. ++|+..+|.+|.|+|.+|...|+
T Consensus       340 gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh  419 (452)
T KOG0514|consen  340 GQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGH  419 (452)
T ss_pred             cchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCc
Confidence            89999999999999999999999999999999999999999999999999999986 78999999999999999999999


Q ss_pred             hHHHHHHHhCC
Q psy11819        607 KTIVEVFIRNP  617 (651)
Q Consensus       607 ~~~~~~Ll~~~  617 (651)
                      .+|.-+|..+-
T Consensus       420 ~eIa~mlYa~~  430 (452)
T KOG0514|consen  420 REIAVMLYAHM  430 (452)
T ss_pred             hHHHHHHHHHH
Confidence            99988876553

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.89  E-value=1.1e-22  Score=172.67  Aligned_cols=143  Identities=17%  Similarity=0.175  Sum_probs=77.1

Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCcH----HHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHH---HHHHHhcCCCCCCC
Q psy11819        452 KPNVNALDKDGCTALTIACKDGYY----EIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGI---VEALLKKYVDVDIP  524 (651)
Q Consensus       452 ~~~~~~~~~~g~t~l~~A~~~~~~----~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~---v~~Ll~~~~~~~~~  524 (651)
                      +++++..+.++.+++|.|++.|+.    +++++|++.|..++.+|..|.||||+|+..|+.+.   +++|+++|++++.+
T Consensus        10 ~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~   89 (166)
T PHA02743         10 NLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINAR   89 (166)
T ss_pred             chHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCC
Confidence            344444455555556666655554    34444555555555555555555555555554332   45555555555555


Q ss_pred             C-CCCCCHHHHHHHcCCHHHHHHHHh-cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Q psy11819        525 G-KERKTAVYTAVEKGNVPILKLLLT-ANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRG  594 (651)
Q Consensus       525 ~-~~g~t~l~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g  594 (651)
                      + ..|.||||+|+..++.+++++|++ .|++++..+..|.||||+|+..++.+++++|+++|++++.++..|
T Consensus        90 d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~  161 (166)
T PHA02743         90 ELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIG  161 (166)
T ss_pred             CCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCC
Confidence            4 245555555555555555555553 455555555555555555555555555555555555555554443

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.89  E-value=1.1e-22  Score=172.64  Aligned_cols=146  Identities=16%  Similarity=0.178  Sum_probs=132.1

Q ss_pred             CCCCCcccCCCCCcHHHHHHhcCcH----HHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHH---HHHHHHhcCCCccc
Q psy11819        484 SGAYINIQDRSGDSNLIHAVKGGHR----GIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVP---ILKLLLTANPDLEI  556 (651)
Q Consensus       484 ~g~~~~~~~~~~~t~l~~A~~~~~~----~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~---~v~~Ll~~~~~~~~  556 (651)
                      +|++++..+..+.++++.|++.|+.    +++++|.+.|..++..|..|+||||+|+..|+.+   ++++|++.|++++.
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~   88 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA   88 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence            5677777888899999999999998    6677888899999999999999999999998865   48999999999999


Q ss_pred             cC-CCCCcHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCC
Q psy11819        557 AT-KDGDTPLLKAVKTRNLEAIQMLID-KKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGET  632 (651)
Q Consensus       557 ~~-~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t  632 (651)
                      ++ ..|+||||+|+..++.+++++|+. .|++++.+|..|.||||+|+..++.+++++|++++++   .+.++..|..
T Consensus        89 ~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~---~~~~~~~~~~  163 (166)
T PHA02743         89 RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAV---CDDPLSIGLS  163 (166)
T ss_pred             CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcccCCcc
Confidence            98 589999999999999999999995 7999999999999999999999999999999999988   6667777653

>KOG0514|consensus

Probab=99.89  E-value=2.3e-23  Score=182.55  Aligned_cols=158  Identities=25%  Similarity=0.353  Sum_probs=143.8

Q ss_pred             CcccCCCCCcHHHHHHhcCcHHHHHHHHhcCC-CCCCCCCCCCCHHHHHHH-----cCCHHHHHHHHhcCCCcccc-CCC
Q psy11819        488 INIQDRSGDSNLIHAVKGGHRGIVEALLKKYV-DVDIPGKERKTAVYTAVE-----KGNVPILKLLLTANPDLEIA-TKD  560 (651)
Q Consensus       488 ~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~g~t~l~~A~~-----~~~~~~v~~Ll~~~~~~~~~-~~~  560 (651)
                      +|+.|.+|+|+||||+.+.++++|+.||+.|+ +++.+|.-|+||++.|+.     ..+.++|..|...| ++|.+ ...
T Consensus       261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~  339 (452)
T KOG0514|consen  261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQH  339 (452)
T ss_pred             hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhh
Confidence            47889999999999999999999999999874 899999999999999884     34678899998876 67765 457


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccc
Q psy11819        561 GDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNN  640 (651)
Q Consensus       561 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~  640 (651)
                      |+|+||+|+.+|+.++|+.||..|||+|++|.+|.|+|+.|+..|++||+++||..+..+  ....|.+|-|+|.+|.+.
T Consensus       340 gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd--~sLtD~DgSTAl~IAlea  417 (452)
T KOG0514|consen  340 GQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCD--ISLTDVDGSTALSIALEA  417 (452)
T ss_pred             cchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCccc--ceeecCCCchhhhhHHhc
Confidence            999999999999999999999999999999999999999999999999999999998776  556899999999999999


Q ss_pred             cchhhhhc
Q psy11819        641 QKSILAQE  648 (651)
Q Consensus       641 ~~~~~~~~  648 (651)
                      |+++|+-.
T Consensus       418 gh~eIa~m  425 (452)
T KOG0514|consen  418 GHREIAVM  425 (452)
T ss_pred             CchHHHHH
Confidence            99988753

>KOG0505|consensus

Probab=99.88  E-value=1.9e-22  Score=187.04  Aligned_cols=202  Identities=26%  Similarity=0.346  Sum_probs=171.0

Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q psy11819        394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDG  473 (651)
Q Consensus       394 ~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~  473 (651)
                      .+|.|++|.+|...+.++|++|+++|++++..+..+|||+|.|+..++..++++|+.+|+++...+.+|..|...+...-
T Consensus        71 ~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea  150 (527)
T KOG0505|consen   71 VDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEA  150 (527)
T ss_pred             CccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcc
Confidence            45889999999999999999999999999999999999999999999999999999999999999999999988877666


Q ss_pred             cHHHHHHHHhC-CCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy11819        474 YYEIAVLLLNS-GAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP  552 (651)
Q Consensus       474 ~~~~~~~Ll~~-g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~  552 (651)
                      ..+++..-... |.+++..-..        -..--.+=+...+..|...+.....|.|+||.|+.+|..++.++|++.|.
T Consensus       151 ~~~~l~~~~~r~gi~iea~R~~--------~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~  222 (527)
T KOG0505|consen  151 TLDVLETEMARQGIDIEAARKA--------EEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGY  222 (527)
T ss_pred             hhHHHHHHHHHhcccHHHHhhh--------hHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhcc
Confidence            66665555432 3332211100        00011122344445888888888889999999999999999999999999


Q ss_pred             CccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q psy11819        553 DLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMR  603 (651)
Q Consensus       553 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~  603 (651)
                      +++..|.+|+||||.|+..|..+++++|+++|++.+...+.|.||+.+|..
T Consensus       223 ~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  223 SVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADE  273 (527)
T ss_pred             CcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhh
Confidence            999999999999999999999999999999999999999999999999975

>PHA02741 hypothetical protein; Provisional

Probab=99.87  E-value=3.6e-21  Score=164.56  Aligned_cols=131  Identities=14%  Similarity=0.227  Sum_probs=105.1

Q ss_pred             cccCCCCCcHHHHHHhcCcHHHHHHHHh------cCCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHhcCCCccccC
Q psy11819        489 NIQDRSGDSNLIHAVKGGHRGIVEALLK------KYVDVDIPGKERKTAVYTAVEKGN----VPILKLLLTANPDLEIAT  558 (651)
Q Consensus       489 ~~~~~~~~t~l~~A~~~~~~~~v~~Ll~------~~~~~~~~~~~g~t~l~~A~~~~~----~~~v~~Ll~~~~~~~~~~  558 (651)
                      +.++..|.||||.|+..|+.++++.|+.      .|.+++..|..|.||||+|+..|+    .+++++|++.|++++.++
T Consensus        15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~   94 (169)
T PHA02741         15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQE   94 (169)
T ss_pred             hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCC
Confidence            3456667777777777777777777643      246677788888888888888887    578888888888888887


Q ss_pred             C-CCCcHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCC
Q psy11819        559 K-DGDTPLLKAVKTRNLEAIQMLID-KKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKN  619 (651)
Q Consensus       559 ~-~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~  619 (651)
                      . .|+||||+|+..++.+++++|++ .|++++..|..|.|||++|+..++.+++++|++.++.
T Consensus        95 ~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~  157 (169)
T PHA02741         95 MLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVAT  157 (169)
T ss_pred             cCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence            4 88888888888888888888887 4888888888888888888888888888888887654

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.86  E-value=9.7e-21  Score=172.59  Aligned_cols=152  Identities=22%  Similarity=0.204  Sum_probs=81.6

Q ss_pred             CCCCCc-HHHHHHHcCcHHHHHHHHhCCCCCcccC----CCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCC-CCCCCCHH
Q psy11819        459 DKDGCT-ALTIACKDGYYEIAVLLLNSGAYINIQD----RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIP-GKERKTAV  532 (651)
Q Consensus       459 ~~~g~t-~l~~A~~~~~~~~~~~Ll~~g~~~~~~~----~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~-~~~g~t~l  532 (651)
                      |..|.| +|+.|++.|+.+++++|+++|++++.++    ..|.||||+|+..++.+++++|+++|++++.. +..|.|||
T Consensus        29 d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpL  108 (300)
T PHA02884         29 NKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPL  108 (300)
T ss_pred             CcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHH
Confidence            334443 3344444455556666666665555542    35556666666666666666666666655553 23455666


Q ss_pred             HHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHH
Q psy11819        533 YTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEV  612 (651)
Q Consensus       533 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~  612 (651)
                      |.|+..++.+++++|++.|++++..|..|.||||+|+..++.+++..+.+  ..   .+..+.+|++++   ++.+++++
T Consensus       109 h~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~---~n~ei~~~  180 (300)
T PHA02884        109 YISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICD--NE---ISNFYKHPKKIL---INFDILKI  180 (300)
T ss_pred             HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcC--Cc---ccccccChhhhh---ccHHHHHH
Confidence            66666666666666666666666655566666666655555555544432  11   233445555543   24555555


Q ss_pred             HHhCCC
Q psy11819        613 FIRNPK  618 (651)
Q Consensus       613 Ll~~~~  618 (651)
                      |+.+..
T Consensus       181 Lish~v  186 (300)
T PHA02884        181 LVSHFI  186 (300)
T ss_pred             HHHHHH
Confidence            555543

>PHA02741 hypothetical protein; Provisional

Probab=99.86  E-value=8.4e-21  Score=162.31  Aligned_cols=131  Identities=19%  Similarity=0.275  Sum_probs=116.7

Q ss_pred             CCCCCCCcHHHHHHHcCcHHHHHHHHh------CCCCCcccCCCCCcHHHHHHhcCc----HHHHHHHHhcCCCCCCCCC
Q psy11819        457 ALDKDGCTALTIACKDGYYEIAVLLLN------SGAYINIQDRSGDSNLIHAVKGGH----RGIVEALLKKYVDVDIPGK  526 (651)
Q Consensus       457 ~~~~~g~t~l~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~~~t~l~~A~~~~~----~~~v~~Ll~~~~~~~~~~~  526 (651)
                      ..+..|.||||.|++.|+.+++++|+.      .|++++.+|..|.||||+|+..++    .+++++|++.|++++.++.
T Consensus        16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~   95 (169)
T PHA02741         16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEM   95 (169)
T ss_pred             ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCc
Confidence            456788999999999999999998753      368888999999999999999998    5889999999999999885


Q ss_pred             -CCCCHHHHHHHcCCHHHHHHHHh-cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q psy11819        527 -ERKTAVYTAVEKGNVPILKLLLT-ANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKI  587 (651)
Q Consensus       527 -~g~t~l~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~  587 (651)
                       .|.||||+|+..++.+++++|+. .|++++..+..|+||||+|+..++.+++++|++.++..
T Consensus        96 ~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~  158 (169)
T PHA02741         96 LEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS  158 (169)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence             89999999999999999999997 59999999999999999999999999999999886653

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.85  E-value=2.3e-20  Score=170.08  Aligned_cols=142  Identities=19%  Similarity=0.186  Sum_probs=124.5

Q ss_pred             cccCCCCCc-HHHHHHhcCcHHHHHHHHhcCCCCCCCC----CCCCCHHHHHHHcCCHHHHHHHHhcCCCcccc-CCCCC
Q psy11819        489 NIQDRSGDS-NLIHAVKGGHRGIVEALLKKYVDVDIPG----KERKTAVYTAVEKGNVPILKLLLTANPDLEIA-TKDGD  562 (651)
Q Consensus       489 ~~~~~~~~t-~l~~A~~~~~~~~v~~Ll~~~~~~~~~~----~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~-~~~g~  562 (651)
                      ..+|..+.+ +|+.|+..++.+++++|+++|++++.++    ..|.||||+|+..++.+++++|+++|+++|.. +..|.
T Consensus        26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~  105 (300)
T PHA02884         26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKI  105 (300)
T ss_pred             hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCC
Confidence            355666665 5677888899999999999999999874    58999999999999999999999999999986 46799


Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccc
Q psy11819        563 TPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDM  638 (651)
Q Consensus       563 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~  638 (651)
                      ||||.|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++..+...+        .+..+.+|++++.
T Consensus       106 TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~  173 (300)
T PHA02884        106 TPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDNE--------ISNFYKHPKKILI  173 (300)
T ss_pred             CHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCCc--------ccccccChhhhhc
Confidence            9999999999999999999999999999999999999999999998886665322        4677888888764

>KOG0512|consensus

Probab=99.84  E-value=1.3e-20  Score=147.07  Aligned_cols=138  Identities=25%  Similarity=0.249  Sum_probs=67.2

Q ss_pred             HHHHHcCcHHHHHHHHhCCC-CCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Q psy11819        467 TIACKDGYYEIAVLLLNSGA-YINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILK  545 (651)
Q Consensus       467 ~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~  545 (651)
                      ..|+..+....|+.|++-.+ .+|.+|.+|.||||.|+.+|+.+|++.|+..|++.+.+...|+||||.||.-++.+++-
T Consensus        68 lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~  147 (228)
T KOG0512|consen   68 LWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAG  147 (228)
T ss_pred             HHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHH
Confidence            34445555555554444322 23444555555555555555555555555555555555555555555555555555555


Q ss_pred             HHHhcCCCccccCCCCCcHHHHHHHcCCH-HHHHHHHH-cCCCCcccCCCCCcHHHHHHHc
Q psy11819        546 LLLTANPDLEIATKDGDTPLLKAVKTRNL-EAIQMLID-KKAKITAVDKRGDTVLHIAMRA  604 (651)
Q Consensus       546 ~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~  604 (651)
                      +|+++|+|+|..+....||||.|+.+.+. ..+++|+. .+.++...+..+.||+.+|.+.
T Consensus       148 ~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT  208 (228)
T KOG0512|consen  148 RLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRT  208 (228)
T ss_pred             HHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHh
Confidence            55555555555555555555555544332 23333332 2444444455555555555443

>KOG0512|consensus

Probab=99.83  E-value=1.4e-19  Score=141.34  Aligned_cols=149  Identities=30%  Similarity=0.403  Sum_probs=125.7

Q ss_pred             HHHHhhHHHHHHhhCHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHh
Q psy11819        121 SLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAARE  200 (651)
Q Consensus       121 ~~~~~~l~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~  200 (651)
                      ....+.+.+++..+.+..|+.+|.......+.+|..|+||||.|+.+|+.+||+.|+..|++.+.+...|+||||.||..
T Consensus        61 ~dp~rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckW  140 (228)
T KOG0512|consen   61 KDPIRLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKW  140 (228)
T ss_pred             cCHHHHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcc
Confidence            34556788889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcCCH-HHHHHHH-hcCCCCCCcCCCCCcHHHHHHhcChH
Q psy11819        201 GYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHT-DTVALLL-DKNADVNAHGNYHISSLIWAAGRGYT  269 (651)
Q Consensus       201 g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~-~~v~~Ll-~~~~~~~~~~~~~~t~L~~a~~~~~~  269 (651)
                      ++.+++..|+++|+|++.......||||.|+...+. ..+.+|+ +.++++-..+..+.||+..|-+.+..
T Consensus       141 nN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~s  211 (228)
T KOG0512|consen  141 NNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSMS  211 (228)
T ss_pred             cchhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhhh
Confidence            999999999999999999998899999999877654 4555555 46777777777778888887766543

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.83  E-value=2.5e-20  Score=157.43  Aligned_cols=128  Identities=21%  Similarity=0.199  Sum_probs=85.2

Q ss_pred             ccCCCCCcHHHHHHhcCcHHHHHHHHhcCC--C-----CCCCCCCCCCHHHHHHHcCCH---HHHHHHHhcCCCccccC-
Q psy11819        490 IQDRSGDSNLIHAVKGGHRGIVEALLKKYV--D-----VDIPGKERKTAVYTAVEKGNV---PILKLLLTANPDLEIAT-  558 (651)
Q Consensus       490 ~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~--~-----~~~~~~~g~t~l~~A~~~~~~---~~v~~Ll~~~~~~~~~~-  558 (651)
                      ..|..|.||||+|+..|+.  ++++...+.  +     ++..|.+|.||||+|+..++.   +++++|++.|++++.++ 
T Consensus        12 ~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~   89 (154)
T PHA02736         12 EPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKER   89 (154)
T ss_pred             hcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCC
Confidence            3445555666666665552  222211111  1     223466777777777777765   35677777777777776 


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCC
Q psy11819        559 KDGDTPLLKAVKTRNLEAIQMLIDK-KAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKN  619 (651)
Q Consensus       559 ~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~  619 (651)
                      ..|+||||+|+..++.+++++|++. |++++..|..|.||||+|+..++.+++++|+++++.
T Consensus        90 ~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~  151 (154)
T PHA02736         90 VFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQ  151 (154)
T ss_pred             CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            4777888888877777888777763 777777777788888888877777888877777765

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.83  E-value=3.9e-20  Score=156.28  Aligned_cols=131  Identities=19%  Similarity=0.189  Sum_probs=109.5

Q ss_pred             CCCCCCCCcHHHHHHHcCcHHHHHHHHhCCC-------CCcccCCCCCcHHHHHHhcCcHH---HHHHHHhcCCCCCCCC
Q psy11819        456 NALDKDGCTALTIACKDGYYEIAVLLLNSGA-------YINIQDRSGDSNLIHAVKGGHRG---IVEALLKKYVDVDIPG  525 (651)
Q Consensus       456 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~-------~~~~~~~~~~t~l~~A~~~~~~~---~v~~Ll~~~~~~~~~~  525 (651)
                      +..|.+|.||||+|++.|+.  ++++...+.       .++.++..|.||||+|+..++.+   ++++|++.|++++.++
T Consensus        11 ~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~   88 (154)
T PHA02736         11 SEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKE   88 (154)
T ss_pred             HhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccC
Confidence            44567889999999999873  233322211       12346788999999999998874   6889999999999988


Q ss_pred             -CCCCCHHHHHHHcCCHHHHHHHHh-cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc
Q psy11819        526 -KERKTAVYTAVEKGNVPILKLLLT-ANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT  588 (651)
Q Consensus       526 -~~g~t~l~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~  588 (651)
                       ..|.||||+|+..++.+++++|+. .|++++..+..|+||||+|+..|+.+++++|+++|++.+
T Consensus        89 ~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736         89 RVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence             489999999999999999999998 499999999999999999999999999999999998865

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.76  E-value=6.1e-18  Score=127.95  Aligned_cols=84  Identities=33%  Similarity=0.567  Sum_probs=42.3

Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHH
Q psy11819        532 VYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVE  611 (651)
Q Consensus       532 l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~  611 (651)
                      ||+|++.|+.+++++|++.+.+++.    |+||||+|+.+|+.+++++|+++|++++.+|..|+||||+|+.+++.++++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~   76 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK   76 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence            3455555555555555555444433    445555555555555555555555555555555555555555555555555


Q ss_pred             HHHhCCCC
Q psy11819        612 VFIRNPKN  619 (651)
Q Consensus       612 ~Ll~~~~~  619 (651)
                      +|+++|.+
T Consensus        77 ~Ll~~g~~   84 (89)
T PF12796_consen   77 LLLEHGAD   84 (89)
T ss_dssp             HHHHTTT-
T ss_pred             HHHHcCCC
Confidence            55555444

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.76  E-value=8.8e-18  Score=127.08  Aligned_cols=89  Identities=34%  Similarity=0.512  Sum_probs=82.8

Q ss_pred             HHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHH
Q psy11819        499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQ  578 (651)
Q Consensus       499 l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~  578 (651)
                      ||.|+..|+.+++++|++.+.+++.    |.||||+|+..|+.+++++|++.|++++..|..|+||||+|+.+|+.++++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~   76 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK   76 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence            7899999999999999999888876    889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCcccC
Q psy11819        579 MLIDKKAKITAVD  591 (651)
Q Consensus       579 ~Ll~~ga~~~~~d  591 (651)
                      +|+++|++++.+|
T Consensus        77 ~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   77 LLLEHGADVNIRN   89 (89)
T ss_dssp             HHHHTTT-TTSS-
T ss_pred             HHHHcCCCCCCcC
Confidence            9999999998765

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG0195|consensus

Probab=99.75  E-value=4.3e-18  Score=144.79  Aligned_cols=141  Identities=27%  Similarity=0.300  Sum_probs=101.7

Q ss_pred             HHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCC
Q psy11819        480 LLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATK  559 (651)
Q Consensus       480 ~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~  559 (651)
                      ||-+..-|.|.-|..|.+|||.|++.|+..+++.|+.+|+.+|..+.-..||||.|+..|+-++|+.|++..+|+|..+.
T Consensus        19 wld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavne   98 (448)
T KOG0195|consen   19 WLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNE   98 (448)
T ss_pred             EecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhc
Confidence            34444556666777777777777777777777777777777777777777788888888888888888888788888888


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCc
Q psy11819        560 DGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNN  620 (651)
Q Consensus       560 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~  620 (651)
                      .|+|||||||..|.-.+.+-|+..||.+++-+++|.|||..|--.-..-+.+.--++|..+
T Consensus        99 hgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~  159 (448)
T KOG0195|consen   99 HGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSP  159 (448)
T ss_pred             cCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHHHhCCCC
Confidence            8888888888888777778888888888878888888887774332333334444445543

>KOG0195|consensus

Probab=99.75  E-value=2e-18  Score=146.74  Aligned_cols=136  Identities=28%  Similarity=0.396  Sum_probs=124.8

Q ss_pred             HHHHhhCHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHH
Q psy11819        129 SYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAE  208 (651)
Q Consensus       129 ~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~  208 (651)
                      .-++.|+.-.|...|.+..-+.+.-|..|.+|||+||+.|+..+|+.|+.+|+.+|..+.-..||||+|+..|+-++|+.
T Consensus         6 ~wcregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqk   85 (448)
T KOG0195|consen    6 GWCREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQK   85 (448)
T ss_pred             hhhhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHH
Confidence            33455555556667777777888889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCcHHHHHH
Q psy11819        209 LLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAA  264 (651)
Q Consensus       209 Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~  264 (651)
                      |++..+|+|..+..|.||||||+..|.-.+.+-|++.|+.++..+..|.|||..|-
T Consensus        86 ll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkak  141 (448)
T KOG0195|consen   86 LLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAK  141 (448)
T ss_pred             HHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhc
Confidence            99999999999999999999999999999999999999999999999999998774

>KOG3676|consensus

Probab=99.75  E-value=5.8e-18  Score=165.91  Aligned_cols=191  Identities=22%  Similarity=0.201  Sum_probs=154.8

Q ss_pred             CCChHHHHHHhcCcHHHHHHHHhcC---------CCCCCCCCCCCcHHHHHHHc---CcHHHHHHHHhCCC----CCcc-
Q psy11819        428 YCWTPLLVATLGNFTEVVELLLEYK---------PNVNALDKDGCTALTIACKD---GYYEIAVLLLNSGA----YINI-  490 (651)
Q Consensus       428 ~~~t~l~~a~~~~~~~~~~~Ll~~~---------~~~~~~~~~g~t~l~~A~~~---~~~~~~~~Ll~~g~----~~~~-  490 (651)
                      ..+.++..+...+.++.+..+.+.+         .+++.+..-|.|.||.|.-+   ++-++++.|++.-.    |+.. 
T Consensus       100 ~d~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~  179 (782)
T KOG3676|consen  100 FDRDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTS  179 (782)
T ss_pred             cchhhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhh
Confidence            3346778888888888887777655         45666677899999999874   34477888887421    1111 


Q ss_pred             cCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCC--------C---------------CCCCCHHHHHHHcCCHHHHHHH
Q psy11819        491 QDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIP--------G---------------KERKTAVYTAVEKGNVPILKLL  547 (651)
Q Consensus       491 ~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~--------~---------------~~g~t~l~~A~~~~~~~~v~~L  547 (651)
                      ..-.|.||||+|+.+.+.++|++|++.|+|++.+        +               .-|..||..||..++.+++++|
T Consensus       180 eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlL  259 (782)
T KOG3676|consen  180 EEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLL  259 (782)
T ss_pred             HhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHH
Confidence            1236899999999999999999999999998642        1               1366899999999999999999


Q ss_pred             HhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCCcHHHHHHHcCChHHHHHHHhCCC
Q psy11819        548 LTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAK--ITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK  618 (651)
Q Consensus       548 l~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~--~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~  618 (651)
                      +++|+|++.+|..|+|.||..+..-..+|..++++.|++  ..++|+.|.|||.+|++-|..++.+.+++..+
T Consensus       260 l~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~~k  332 (782)
T KOG3676|consen  260 LAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILERRK  332 (782)
T ss_pred             HhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHhhc
Confidence            999999999999999999999998888999999999998  88889999999999999999999999998853

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.74  E-value=8.2e-17  Score=132.28  Aligned_cols=122  Identities=33%  Similarity=0.538  Sum_probs=80.9

Q ss_pred             CCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHc
Q psy11819        492 DRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKT  571 (651)
Q Consensus       492 ~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~  571 (651)
                      +..|.|||+.|+..++.+++++|++.+.+.+..+..|.+|+|.|+..++.+++++|++.|++++..+..|.||+|+|+..
T Consensus         4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~   83 (126)
T cd00204           4 DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARN   83 (126)
T ss_pred             CcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence            34566666666666666666666666665556666666666666666666666666666666666666666677766666


Q ss_pred             CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHH
Q psy11819        572 RNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVF  613 (651)
Q Consensus       572 ~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~L  613 (651)
                      ++.+++++|+++|.+++..|..|.||+++|...++.+++++|
T Consensus        84 ~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L  125 (126)
T cd00204          84 GNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLL  125 (126)
T ss_pred             CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence            666667776666666666666666777777666666666665

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG3676|consensus

Probab=99.73  E-value=3.4e-17  Score=160.65  Aligned_cols=187  Identities=26%  Similarity=0.255  Sum_probs=154.5

Q ss_pred             ChHHHHHHHcCCHHHHHHHHHcC---------CCCCCcCcCCChHHHHHHhc---CcHHHHHHHHhcCCC-CCC----CC
Q psy11819        397 TTPLVWACRKGHVEIVDILLKAG---------ANVDVAGLYCWTPLLVATLG---NFTEVVELLLEYKPN-VNA----LD  459 (651)
Q Consensus       397 ~t~l~~A~~~~~~~~v~~Ll~~~---------~~~~~~~~~~~t~l~~a~~~---~~~~~~~~Ll~~~~~-~~~----~~  459 (651)
                      +.++..|...+..+.+..++..+         -+++.+...|+|.||.|..+   +..++++.|++.-.. +|.    -.
T Consensus       102 ~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~ee  181 (782)
T KOG3676|consen  102 RDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEE  181 (782)
T ss_pred             hhhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHh
Confidence            36677777788888777777654         45677788899999998873   445888888875332 111    12


Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccC---------C--------------CCCcHHHHHHhcCcHHHHHHHHh
Q psy11819        460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQD---------R--------------SGDSNLIHAVKGGHRGIVEALLK  516 (651)
Q Consensus       460 ~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~---------~--------------~~~t~l~~A~~~~~~~~v~~Ll~  516 (651)
                      -.|.||||+|+.+.+.++|++|++.|||++.+-         .              .|+.||..|+..++.+++++|++
T Consensus       182 Y~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~  261 (782)
T KOG3676|consen  182 YYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA  261 (782)
T ss_pred             hcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence            368999999999999999999999999987431         1              26789999999999999999999


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC--ccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy11819        517 KYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPD--LEIATKDGDTPLLKAVKTRNLEAIQMLIDK  583 (651)
Q Consensus       517 ~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  583 (651)
                      +|+|++.+|..|+|.||..+.....++.++++++|++  ..+++..|-|||..|++-|+.++.+.+++.
T Consensus       262 ~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  262 HGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             cCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            9999999999999999999999899999999999998  888999999999999999999999999987

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.72  E-value=1.9e-16  Score=130.08  Aligned_cols=124  Identities=40%  Similarity=0.586  Sum_probs=114.0

Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Q psy11819        458 LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVE  537 (651)
Q Consensus       458 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~  537 (651)
                      .+.+|.|||+.|++.++.+++++|++.+.+.+..+..|.+|++.|+..++.+++++|++.++.++..+..+.||+|+|+.
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~   82 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR   82 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence            45678999999999999999999999999888888899999999999999999999999998888888899999999999


Q ss_pred             cCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy11819        538 KGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLI  581 (651)
Q Consensus       538 ~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll  581 (651)
                      .++.+++++|++.+.+++..+..|.||+++|+..++.+++++|+
T Consensus        83 ~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          83 NGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            99999999999999888989999999999999999999999874

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG4214|consensus

Probab=99.65  E-value=7.1e-16  Score=106.75  Aligned_cols=104  Identities=22%  Similarity=0.313  Sum_probs=87.3

Q ss_pred             cHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHH
Q psy11819        497 SNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEA  576 (651)
Q Consensus       497 t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~  576 (651)
                      .-+..++++|..+-|+..+..|.+++..- .|++|||+|+..|.++++++|+..|++++.+|+.|.|||..|+..||.++
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~c   82 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDC   82 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHH
Confidence            34567888888888888888887776543 78899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCcccCCCCCcHHHHH
Q psy11819        577 IQMLIDKKAKITAVDKRGDTVLHIA  601 (651)
Q Consensus       577 v~~Ll~~ga~~~~~d~~g~t~l~~A  601 (651)
                      |++|+++||+-....-+|.+.+..+
T Consensus        83 VklLL~~GAdrt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   83 VKLLLQNGADRTIHAPDGTALIEAT  107 (117)
T ss_pred             HHHHHHcCcccceeCCCchhHHhhc
Confidence            9999999998777777777765543

>KOG4214|consensus

Probab=99.60  E-value=5.4e-15  Score=102.45  Aligned_cols=95  Identities=32%  Similarity=0.505  Sum_probs=44.7

Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcCCHHHHH
Q psy11819        161 LMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVA  240 (651)
Q Consensus       161 l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~  240 (651)
                      +.+++++|.++-|+-.+..|.++|..- .|++|||+|+-.|..+++++|+..|++++..|+.|-|||-.|+..||.++|+
T Consensus         6 ~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVk   84 (117)
T KOG4214|consen    6 VAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVK   84 (117)
T ss_pred             HhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHH
Confidence            334444444444444444444443332 3444455554444444555554444444444444444444444444444444


Q ss_pred             HHHhcCCCCCCcCCCC
Q psy11819        241 LLLDKNADVNAHGNYH  256 (651)
Q Consensus       241 ~Ll~~~~~~~~~~~~~  256 (651)
                      +|++.|++-......|
T Consensus        85 lLL~~GAdrt~~~PdG  100 (117)
T KOG4214|consen   85 LLLQNGADRTIHAPDG  100 (117)
T ss_pred             HHHHcCcccceeCCCc
Confidence            4444444444433333

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.52  E-value=1.5e-13  Score=126.78  Aligned_cols=122  Identities=26%  Similarity=0.360  Sum_probs=64.1

Q ss_pred             CCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC-----HHHHHHHHhcCC---CccccCCCCCcHHH
Q psy11819        495 GDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGN-----VPILKLLLTANP---DLEIATKDGDTPLL  566 (651)
Q Consensus       495 ~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~-----~~~v~~Ll~~~~---~~~~~~~~g~t~L~  566 (651)
                      +.++++.+...+..+++++++..|++++..+.+|.|+||+|+..++     .+++++|++.|+   ..+..+..|.||||
T Consensus        73 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~  152 (235)
T COG0666          73 GRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLH  152 (235)
T ss_pred             ccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhH
Confidence            3444444444444444444444444444444444444444444444     555555555555   33334555555555


Q ss_pred             HHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhC
Q psy11819        567 KAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN  616 (651)
Q Consensus       567 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~  616 (651)
                      +|+..|+.+++++|++.|++++.++..|.|+++.|+..++.++++.+++.
T Consensus       153 ~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~  202 (235)
T COG0666         153 WAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDK  202 (235)
T ss_pred             HHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhc
Confidence            55555555555555555555555555555555555555555555555554

>KOG1710|consensus

Probab=99.51  E-value=1.2e-13  Score=118.01  Aligned_cols=121  Identities=23%  Similarity=0.275  Sum_probs=107.9

Q ss_pred             CCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccc-cCCCCCcHHHHHHHcCC
Q psy11819        495 GDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEI-ATKDGDTPLLKAVKTRN  573 (651)
Q Consensus       495 ~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~  573 (651)
                      ...||.-++..|..+-...|++---+++..|..|.++|..|+.+|+.++++.|++.|+|+|. .+..++||||+|+.+|+
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn   91 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGN   91 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCC
Confidence            35688888888888888888887666888999999999999999999999999999999984 56788999999999999


Q ss_pred             HHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHh
Q psy11819        574 LEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIR  615 (651)
Q Consensus       574 ~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~  615 (651)
                      .++.++|++.|+.+...|.-|+|+-..|+.-|+.++|..+=.
T Consensus        92 ~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN  133 (396)
T KOG1710|consen   92 QDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINN  133 (396)
T ss_pred             chHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhc
Confidence            999999999999999999999999999999999998876643

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.51  E-value=1.8e-14  Score=96.14  Aligned_cols=55  Identities=36%  Similarity=0.492  Sum_probs=29.6

Q ss_pred             HHhcC-CCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHH
Q psy11819        547 LLTAN-PDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIA  601 (651)
Q Consensus       547 Ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A  601 (651)
                      |++.| .+++..|..|+||||+|+.+|+.++|++|++.|++++.+|+.|+||+|+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            56667 77888888888888888888888888888888888888888888888887

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.48  E-value=3.9e-13  Score=124.09  Aligned_cols=129  Identities=32%  Similarity=0.381  Sum_probs=113.3

Q ss_pred             CCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCc-----HHHHHHHHhcCC---CCCCCCCC
Q psy11819        456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGH-----RGIVEALLKKYV---DVDIPGKE  527 (651)
Q Consensus       456 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~-----~~~v~~Ll~~~~---~~~~~~~~  527 (651)
                      ...+..+.++++.++..+..+++++++..|++++..+..|.||+|.|+..++     .+++++|++.|.   ..+..+..
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~  146 (235)
T COG0666          67 AARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDED  146 (235)
T ss_pred             ccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCC
Confidence            3345567788888888888888888888888888888889999999998888     899999999988   55666999


Q ss_pred             CCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q psy11819        528 RKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK  584 (651)
Q Consensus       528 g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g  584 (651)
                      |.||||+|+..|+.++++.|++.|++++..+..|.|+++.|+..++.++++.+++.+
T Consensus       147 g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         147 GNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            999999999999999999999999999999999999999999999999999999875

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.48  E-value=9.8e-14  Score=92.45  Aligned_cols=54  Identities=37%  Similarity=0.577  Sum_probs=31.1

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHH
Q psy11819        561 GDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI  614 (651)
Q Consensus       561 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll  614 (651)
                      |+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            456666666666666666666666666666666666666666666666666654

...

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.45  E-value=2.7e-13  Score=90.34  Aligned_cols=54  Identities=46%  Similarity=0.754  Sum_probs=32.3

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHH
Q psy11819        157 GGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL  210 (651)
Q Consensus       157 ~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll  210 (651)
                      |+||||+|+..|+.+++++|++.|++++..|.+|.||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            456666666666666666666666666666666666666666666666666664

...

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.43  E-value=7.4e-13  Score=138.03  Aligned_cols=106  Identities=23%  Similarity=0.232  Sum_probs=77.1

Q ss_pred             cHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHH
Q psy11819        497 SNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEA  576 (651)
Q Consensus       497 t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~  576 (651)
                      ..|+.|+..|+.+.++.|+++|++++..|..|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.++
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i  163 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV  163 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence            34667777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             HHHHHHc-------CCCCcccCCCCCcHHHHHH
Q psy11819        577 IQMLIDK-------KAKITAVDKRGDTVLHIAM  602 (651)
Q Consensus       577 v~~Ll~~-------ga~~~~~d~~g~t~l~~A~  602 (651)
                      +++|+++       |++++..+..|.+|+..+.
T Consensus       164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        164 VQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             HHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence            7777776       6666666666666655443

>KOG0515|consensus

Probab=99.40  E-value=1.1e-12  Score=121.85  Aligned_cols=116  Identities=23%  Similarity=0.292  Sum_probs=102.1

Q ss_pred             HHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHH
Q psy11819        499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQ  578 (651)
Q Consensus       499 l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~  578 (651)
                      |.-|+..|-+++|+-++..-.|+...+.+|.|+||-|+.-|+.+||+||++.|+++|..|.+|+||||+|+..+++.+++
T Consensus       554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ck  633 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCK  633 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHH
Confidence            34488899999999999988889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCccc-CCCCCcHHHHH--HHcCChHHHHHHH
Q psy11819        579 MLIDKKAKITAV-DKRGDTVLHIA--MRARSKTIVEVFI  614 (651)
Q Consensus       579 ~Ll~~ga~~~~~-d~~g~t~l~~A--~~~~~~~~~~~Ll  614 (651)
                      .|++.|+-+-+. -.++.||..-+  ...|+..+.+||.
T Consensus       634 qLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~  672 (752)
T KOG0515|consen  634 QLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLY  672 (752)
T ss_pred             HHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHH
Confidence            999999876554 35677887766  3667888888886

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.39  E-value=1.7e-12  Score=135.31  Aligned_cols=106  Identities=27%  Similarity=0.288  Sum_probs=96.3

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHH
Q psy11819        464 TALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPI  543 (651)
Q Consensus       464 t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~  543 (651)
                      +.|+.|+..|+.+.+++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..++.++
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i  163 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV  163 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence            35888999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhc-------CCCccccCCCCCcHHHHHH
Q psy11819        544 LKLLLTA-------NPDLEIATKDGDTPLLKAV  569 (651)
Q Consensus       544 v~~Ll~~-------~~~~~~~~~~g~t~L~~A~  569 (651)
                      +++|+++       |++++..+..|.+|+..+.
T Consensus       164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        164 VQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             HHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence            9999998       8888888888888876443

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.38  E-value=5.3e-13  Score=89.08  Aligned_cols=55  Identities=35%  Similarity=0.435  Sum_probs=27.3

Q ss_pred             HHhcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHH
Q psy11819        514 LLKKY-VDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKA  568 (651)
Q Consensus       514 Ll~~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A  568 (651)
                      |+++| .+++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            45555 67777777788888888888888888888877888888888888888776

>KOG1710|consensus

Probab=99.37  E-value=6e-12  Score=107.75  Aligned_cols=118  Identities=32%  Similarity=0.491  Sum_probs=67.1

Q ss_pred             HhhHHHHHHhhCHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccc-CCCCCCHHHHHHHhCC
Q psy11819        124 YRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAE-DNDNWSPLTYAAREGY  202 (651)
Q Consensus       124 ~~~l~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~t~L~~A~~~g~  202 (651)
                      .+.|++++..++.+....+|.. ....+.+|++|.|+|..|+..|+.++|+.|++.|+++|.. +..+.||||+|+.+|+
T Consensus        13 ~~~Lle~i~Kndt~~a~~LLs~-vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn   91 (396)
T KOG1710|consen   13 KSPLLEAIDKNDTEAALALLST-VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGN   91 (396)
T ss_pred             hhHHHHHHccCcHHHHHHHHHH-hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCC
Confidence            3455566666666665555544 2234555666666666666666666666666666655542 3345566666666666


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCchHHHHHHHcCCHHHHHHH
Q psy11819        203 TDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALL  242 (651)
Q Consensus       203 ~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~L  242 (651)
                      .++.+.|++.|+.+...+.-|.|+-..|+.-|+.++|..+
T Consensus        92 ~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iI  131 (396)
T KOG1710|consen   92 QDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAII  131 (396)
T ss_pred             chHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHH
Confidence            6666666666655555555555555555555555555444

>KOG0515|consensus

Probab=99.35  E-value=3.6e-12  Score=118.37  Aligned_cols=118  Identities=22%  Similarity=0.323  Sum_probs=93.4

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcCCHHHH
Q psy11819        160 ALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTV  239 (651)
Q Consensus       160 ~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~v  239 (651)
                      .|.-|+..|-+++|+..+..--++...+.+|.||||-|+..||.+||++|++.|+++|..|.+||||||+|+..++.-++
T Consensus       553 LLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~c  632 (752)
T KOG0515|consen  553 LLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMC  632 (752)
T ss_pred             HHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHH
Confidence            45568888999999988887777777888899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCcC-CCCCcHHHHH--HhcChHHHHHHHHH
Q psy11819        240 ALLLDKNADVNAHG-NYHISSLIWA--AGRGYTEIVALLVK  277 (651)
Q Consensus       240 ~~Ll~~~~~~~~~~-~~~~t~L~~a--~~~~~~~~v~~L~~  277 (651)
                      +.|++.|+-+.... .++.|+...+  .+.|...|.+||..
T Consensus       633 kqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  633 KQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             HHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence            99999888765432 2334555444  24566667777653

>PF13606 Ank_3: Ankyrin repeat

Probab=99.01  E-value=3.4e-10  Score=63.48  Aligned_cols=29  Identities=34%  Similarity=0.465  Sum_probs=27.6

Q ss_pred             CCCchHHHHhhcCcHHHHHHHHhhcCCcc
Q psy11819         13 SGDSNLIHAVKGGHRGIVEALLKKYVDVD   41 (651)
Q Consensus        13 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~   41 (651)
                      +|+||||+||+.|+.|+|++|+++|++++
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            59999999999999999999999999886

>PF13606 Ank_3: Ankyrin repeat

Probab=98.87  E-value=3.1e-09  Score=59.61  Aligned_cols=29  Identities=31%  Similarity=0.604  Sum_probs=19.1

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCc
Q psy11819        560 DGDTPLLKAVKTRNLEAIQMLIDKKAKIT  588 (651)
Q Consensus       560 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~  588 (651)
                      +|+||||+|+.+|+.++|++|+++|+|++
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            35666666666666666666666666655

>KOG0506|consensus

Probab=98.84  E-value=3.5e-09  Score=97.65  Aligned_cols=94  Identities=22%  Similarity=0.292  Sum_probs=85.9

Q ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHH
Q psy11819        525 GKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDK-KAKITAVDKRGDTVLHIAMR  603 (651)
Q Consensus       525 ~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~  603 (651)
                      +.++...+.+|+..|++..++-+.-.|.|++..|-+.+|+||.|+-.|+.+++++|++. +.+++..|.+|+|||+-|..
T Consensus       503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~  582 (622)
T KOG0506|consen  503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH  582 (622)
T ss_pred             cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence            34566788999999999999999999999999999999999999999999999999986 89999999999999999999


Q ss_pred             cCChHHHHHHHhCCC
Q psy11819        604 ARSKTIVEVFIRNPK  618 (651)
Q Consensus       604 ~~~~~~~~~Ll~~~~  618 (651)
                      .++.+++++|-+.-.
T Consensus       583 F~h~~v~k~L~~~~~  597 (622)
T KOG0506|consen  583 FKHKEVVKLLEEAQY  597 (622)
T ss_pred             cCcHHHHHHHHHHhc
Confidence            999999999987643

>KOG0782|consensus

Probab=98.84  E-value=1.4e-08  Score=95.74  Aligned_cols=119  Identities=24%  Similarity=0.304  Sum_probs=101.9

Q ss_pred             HHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC--ccccCCCCCcHHHHHHHcCCHHH
Q psy11819        499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPD--LEIATKDGDTPLLKAVKTRNLEA  576 (651)
Q Consensus       499 l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~  576 (651)
                      +..|+..+++--++....+|-++-+++.+..+.||+|+..|+-++|+|++++|+.  ++..|..|.|+||.|+..++..+
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v  949 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV  949 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence            3445555555445555556777777888889999999999999999999999986  66778999999999999999999


Q ss_pred             HHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCC
Q psy11819        577 IQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNP  617 (651)
Q Consensus       577 v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~  617 (651)
                      .++|++.|+.+..+|..|.||-.-|-+.++.+..-||-...
T Consensus       950 c~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~rq  990 (1004)
T KOG0782|consen  950 CQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESRQ  990 (1004)
T ss_pred             HHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhhh
Confidence            99999999999999999999999999999999999986554

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.82  E-value=4.9e-09  Score=61.07  Aligned_cols=32  Identities=34%  Similarity=0.501  Sum_probs=29.6

Q ss_pred             CCCchHHHHhhcCcHHHHHHHHhhcCCccCCC
Q psy11819         13 SGDSNLIHAVKGGHRGIVEALLKKYVDVDIPG   44 (651)
Q Consensus        13 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~   44 (651)
                      +|+||||+|+..|+.++|++|+++|++++..+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            69999999999999999999999999997643

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.82  E-value=6.7e-09  Score=60.48  Aligned_cols=33  Identities=33%  Similarity=0.553  Sum_probs=25.8

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Q psy11819        560 DGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDK  592 (651)
Q Consensus       560 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~  592 (651)
                      +|+||||+|+..|+.+++++|+++|++++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence            477888888888888888888888888877663

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0783|consensus

Probab=98.82  E-value=2.2e-09  Score=105.86  Aligned_cols=83  Identities=31%  Similarity=0.393  Sum_probs=53.9

Q ss_pred             CcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHH
Q psy11819        488 INIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGK-ERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLL  566 (651)
Q Consensus       488 ~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~  566 (651)
                      .+++|..|+++||+|+..+...+++||+++|+++..+|. .|+||||.|+..|+++++-.|+.+|..+.+.|++|.+||.
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq  124 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQ  124 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHH
Confidence            355666666666666666666666666666666666654 3666666666666666666666666666666666666666


Q ss_pred             HHHH
Q psy11819        567 KAVK  570 (651)
Q Consensus       567 ~A~~  570 (651)
                      ..++
T Consensus       125 ~~~r  128 (1267)
T KOG0783|consen  125 FLSR  128 (1267)
T ss_pred             HHhh
Confidence            5444

>KOG0818|consensus

Probab=98.77  E-value=3.3e-08  Score=91.80  Aligned_cols=84  Identities=23%  Similarity=0.275  Sum_probs=68.7

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHH
Q psy11819        531 AVYTAVEKGNVPILKLLLTANPDLEIAT-KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTI  609 (651)
Q Consensus       531 ~l~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~  609 (651)
                      -||..++.|+.+..--|+..|+++|..+ ..|.||||.|++.|+.--+++|+=+|||+...|..|+||+.||-..|+.++
T Consensus       136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~l  215 (669)
T KOG0818|consen  136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHEL  215 (669)
T ss_pred             HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHH
Confidence            4777888888888888888888888766 468888888888888888888888888888888888888888888888776


Q ss_pred             HHHHH
Q psy11819        610 VEVFI  614 (651)
Q Consensus       610 ~~~Ll  614 (651)
                      .+.|+
T Consensus       216 aeRl~  220 (669)
T KOG0818|consen  216 AERLV  220 (669)
T ss_pred             HHHHH
Confidence            66554

>KOG0506|consensus

Probab=98.73  E-value=1.4e-08  Score=93.71  Aligned_cols=91  Identities=24%  Similarity=0.342  Sum_probs=84.8

Q ss_pred             CCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc-CCCccccCCCCCcHHHHHHHc
Q psy11819        493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTA-NPDLEIATKDGDTPLLKAVKT  571 (651)
Q Consensus       493 ~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~  571 (651)
                      ..+...+++|+..|.+..++.+.-.|.|+...|.+.+|+||.|+..|+.+++++|++. +.+++.+|+.|+|||.-|...
T Consensus       504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F  583 (622)
T KOG0506|consen  504 NDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHF  583 (622)
T ss_pred             ccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhc
Confidence            3455678999999999999999999999999999999999999999999999999997 778999999999999999999


Q ss_pred             CCHHHHHHHHHc
Q psy11819        572 RNLEAIQMLIDK  583 (651)
Q Consensus       572 ~~~~~v~~Ll~~  583 (651)
                      +|.+++++|-+.
T Consensus       584 ~h~~v~k~L~~~  595 (622)
T KOG0506|consen  584 KHKEVVKLLEEA  595 (622)
T ss_pred             CcHHHHHHHHHH
Confidence            999999999875

>KOG0783|consensus

Probab=98.71  E-value=1.2e-08  Score=100.96  Aligned_cols=94  Identities=35%  Similarity=0.487  Sum_probs=82.7

Q ss_pred             HHHHHHcC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHhCCHHHHHHHHHcCCCC
Q psy11819        139 LQTFLENK-RTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDN-DNWSPLTYAAREGYTDVCAELLDHGADL  216 (651)
Q Consensus       139 v~~~l~~~-~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~~t~L~~A~~~g~~~iv~~Ll~~~~~~  216 (651)
                      ++.++.+. ....+..|..|+|+||+|+..|..++++||+++|+++..+|. .|+||||.|+..|++|++..|+++|...
T Consensus        33 lk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL  112 (1267)
T KOG0783|consen   33 LKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSL  112 (1267)
T ss_pred             HHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCce
Confidence            44444333 333567788999999999999999999999999999998886 4999999999999999999999999999


Q ss_pred             CCCCCCCchHHHHHHH
Q psy11819        217 EHRDMGGWSPLMWASY  232 (651)
Q Consensus       217 ~~~~~~~~t~L~~A~~  232 (651)
                      ...|++|.+||++-++
T Consensus       113 ~i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen  113 RIKDKEGLSPLQFLSR  128 (1267)
T ss_pred             EEecccCCCHHHHHhh
Confidence            9999999999998876

>KOG0782|consensus

Probab=98.70  E-value=5.9e-08  Score=91.73  Aligned_cols=118  Identities=22%  Similarity=0.192  Sum_probs=105.1

Q ss_pred             HHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCC--CCCCCCCCCCHHHHHHHcCCHHH
Q psy11819        466 LTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVD--VDIPGKERKTAVYTAVEKGNVPI  543 (651)
Q Consensus       466 l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~--~~~~~~~g~t~l~~A~~~~~~~~  543 (651)
                      +..|+..+++--++....+|.++-+++.+..+.||+|+..|+-++|+|++++|+.  ++..+..|.|+||.|+..++-.+
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v  949 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV  949 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence            3455666666666666778899999999999999999999999999999999875  56778899999999999999999


Q ss_pred             HHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy11819        544 LKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDK  583 (651)
Q Consensus       544 v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  583 (651)
                      .++|++.|+.+...|..|.||-..|-+-|+.++.-||-..
T Consensus       950 c~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  950 CQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             HHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence            9999999999999999999999999999999999999653

>KOG0818|consensus

Probab=98.68  E-value=1.6e-07  Score=87.45  Aligned_cols=93  Identities=29%  Similarity=0.358  Sum_probs=82.9

Q ss_pred             CCCCCCCc------HHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCc
Q psy11819        152 DRDDNGGT------ALMFAAQKGKLSFVRELVTRGADVNAED-NDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGW  224 (651)
Q Consensus       152 ~~~~~~~t------~l~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~  224 (651)
                      .+|..|.+      -||..++.|+.+..=.|+..|+++|..+ ..|.||||.|++.|+.-=+++|+-+|+|+...|.+|.
T Consensus       122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~Gm  201 (669)
T KOG0818|consen  122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGM  201 (669)
T ss_pred             CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCC
Confidence            34555554      4899999999999999999999998764 5699999999999999999999999999999999999


Q ss_pred             hHHHHHHHcCCHHHHHHHHh
Q psy11819        225 SPLMWASYKGHTDTVALLLD  244 (651)
Q Consensus       225 t~L~~A~~~~~~~~v~~Ll~  244 (651)
                      ||+.+|-..||-++.+.|++
T Consensus       202 tP~~~AR~~gH~~laeRl~e  221 (669)
T KOG0818|consen  202 TPVDYARQGGHHELAERLVE  221 (669)
T ss_pred             cHHHHHHhcCchHHHHHHHH
Confidence            99999999999988888876

>KOG3609|consensus

Probab=98.51  E-value=4.6e-07  Score=91.15  Aligned_cols=119  Identities=25%  Similarity=0.297  Sum_probs=72.4

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCC----CCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC
Q psy11819        464 TALTIACKDGYYEIAVLLLNSG----AYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKG  539 (651)
Q Consensus       464 t~l~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~  539 (651)
                      .-+..|++.|+...++..++..    ..+|..|.-|.++|+.|+.+.+.+++++|+++....       ..+|.+|+..|
T Consensus        27 ~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~   99 (822)
T KOG3609|consen   27 KGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAVG   99 (822)
T ss_pred             HHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHHH
Confidence            3455666666666666665532    335556666667777777777777777776654332       34666667777


Q ss_pred             CHHHHHHHHhcCCCc----------cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcc
Q psy11819        540 NVPILKLLLTANPDL----------EIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITA  589 (651)
Q Consensus       540 ~~~~v~~Ll~~~~~~----------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~  589 (651)
                      ..++|+.++.+....          ...-..+.|||..|+..++.|++++|+++|+.+..
T Consensus       100 ~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~  159 (822)
T KOG3609|consen  100 SVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPI  159 (822)
T ss_pred             HHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence            777777766653221          01122356777777777777777777777766443

>KOG0705|consensus

Probab=98.47  E-value=4.4e-07  Score=86.29  Aligned_cols=89  Identities=26%  Similarity=0.299  Sum_probs=76.5

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCC--cc--ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC
Q psy11819        531 AVYTAVEKGNVPILKLLLTANPD--LE--IATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARS  606 (651)
Q Consensus       531 ~l~~A~~~~~~~~v~~Ll~~~~~--~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~  606 (651)
                      -|..|+...++..+-+||.+|..  +|  ..+.+|+|+||.|+..|++.+.++|+-+|+|+.++|..|+|||.||-..|.
T Consensus       627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~s  706 (749)
T KOG0705|consen  627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGS  706 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhccc
Confidence            45667777888888899998864  33  335577999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHhCCCC
Q psy11819        607 KTIVEVFIRNPKN  619 (651)
Q Consensus       607 ~~~~~~Ll~~~~~  619 (651)
                      -+++++|+.+|=.
T Consensus       707 qec~d~llq~gcp  719 (749)
T KOG0705|consen  707 QECIDVLLQYGCP  719 (749)
T ss_pred             HHHHHHHHHcCCC
Confidence            9999999998743

>KOG0705|consensus

Probab=98.45  E-value=6.6e-07  Score=85.16  Aligned_cols=91  Identities=24%  Similarity=0.232  Sum_probs=80.8

Q ss_pred             HHHHHHhcCcHHHHHHHHhcCCCC----CCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q psy11819        498 NLIHAVKGGHRGIVEALLKKYVDV----DIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRN  573 (651)
Q Consensus       498 ~l~~A~~~~~~~~v~~Ll~~~~~~----~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~  573 (651)
                      -|..|+...++..+-.|+.+|...    ...+.+|.|+||.|++.|++.+.++|+-+|+|+..+|..|+|+|.||-+.|.
T Consensus       627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~s  706 (749)
T KOG0705|consen  627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGS  706 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhccc
Confidence            367788888999999999987542    2345678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCc
Q psy11819        574 LEAIQMLIDKKAKIT  588 (651)
Q Consensus       574 ~~~v~~Ll~~ga~~~  588 (651)
                      .+|+..|+++|+...
T Consensus       707 qec~d~llq~gcp~e  721 (749)
T KOG0705|consen  707 QECIDVLLQYGCPDE  721 (749)
T ss_pred             HHHHHHHHHcCCCcc
Confidence            999999999987643

>KOG0522|consensus

Probab=98.42  E-value=6.7e-07  Score=84.66  Aligned_cols=84  Identities=29%  Similarity=0.326  Sum_probs=43.3

Q ss_pred             HHHHHhcCcHHHHHHHHh--cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHH
Q psy11819        499 LIHAVKGGHRGIVEALLK--KYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEA  576 (651)
Q Consensus       499 l~~A~~~~~~~~v~~Ll~--~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~  576 (651)
                      +|.++.....+-++..+.  ....++..|..|.||||.|+..|+.+.++.|+..|+++..+++.|++|||.|+..|+..+
T Consensus        24 lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~  103 (560)
T KOG0522|consen   24 LHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQI  103 (560)
T ss_pred             cchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHH
Confidence            555554444433333222  233445555555555555555555555555555555555555555555555555555555


Q ss_pred             HHHHHH
Q psy11819        577 IQMLID  582 (651)
Q Consensus       577 v~~Ll~  582 (651)
                      +..++.
T Consensus       104 i~~vlr  109 (560)
T KOG0522|consen  104 ITEVLR  109 (560)
T ss_pred             HHHHHH
Confidence            544443

>KOG3609|consensus

Probab=98.36  E-value=1.9e-06  Score=86.87  Aligned_cols=126  Identities=19%  Similarity=0.145  Sum_probs=103.7

Q ss_pred             hHHHHhhHHHHHHhhCHHHHHHHHHcCCC---CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHH
Q psy11819        120 VSLCYRTLQSYIAEDNLDSLQTFLENKRT---VADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTY  196 (651)
Q Consensus       120 ~~~~~~~l~~~~~~~~~~~v~~~l~~~~~---~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~  196 (651)
                      .....+....++..|+...|+..+.....   .++..|.-|+++|+.|+.+-+.+++++|++.+...       ..||-+
T Consensus        22 l~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~   94 (822)
T KOG3609|consen   22 LNEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLL   94 (822)
T ss_pred             cchhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHH
Confidence            34456778899999999999999977655   56788999999999999999999999999976544       349999


Q ss_pred             HHHhCCHHHHHHHHHcCCCC----------CCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCc
Q psy11819        197 AAREGYTDVCAELLDHGADL----------EHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAH  252 (651)
Q Consensus       197 A~~~g~~~iv~~Ll~~~~~~----------~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~  252 (651)
                      |+..|..++|+.++.+....          ...-..+-|||.+||..+++|++++|+.+|+.+..+
T Consensus        95 aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~P  160 (822)
T KOG3609|consen   95 AIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIP  160 (822)
T ss_pred             HHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCC
Confidence            99999999999999874221          122345679999999999999999999999876543

>KOG2384|consensus

Probab=98.26  E-value=3.3e-06  Score=68.53  Aligned_cols=66  Identities=14%  Similarity=0.090  Sum_probs=45.3

Q ss_pred             CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC-CCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q psy11819        519 VDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN-PDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK  584 (651)
Q Consensus       519 ~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g  584 (651)
                      .++|..|..|+|++++|+..|+.+.+.||+.+| +.+.+.|..|.+++.+|=+.|..++|+.|.+.-
T Consensus         3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~   69 (223)
T KOG2384|consen    3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEND   69 (223)
T ss_pred             CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHh
Confidence            356666666777777777777777777777776 566667777777777777777777777666653

>KOG0511|consensus

Probab=98.21  E-value=4e-06  Score=75.68  Aligned_cols=75  Identities=32%  Similarity=0.319  Sum_probs=64.4

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHc
Q psy11819        158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYK  233 (651)
Q Consensus       158 ~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~  233 (651)
                      .--|..||+.|+++.|++|++.|.++|..|....+||.+|+..||.+++++|+++|+-......+|...+ |++.+
T Consensus        37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~-YgaLn  111 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCH-YGALN  111 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhh-hhhhh
Confidence            3468899999999999999999999999999999999999999999999999999987665556665554 44443

>KOG2384|consensus

Probab=98.17  E-value=4.9e-06  Score=67.61  Aligned_cols=64  Identities=28%  Similarity=0.364  Sum_probs=36.1

Q ss_pred             CCcccCCCCCCHHHHHHHhCCHHHHHHHHHcC-CCCCCCCCCCchHHHHHHHcCCHHHHHHHHhc
Q psy11819        182 DVNAEDNDNWSPLTYAAREGYTDVCAELLDHG-ADLEHRDMGGWSPLMWASYKGHTDTVALLLDK  245 (651)
Q Consensus       182 ~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~-~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~  245 (651)
                      ++|.+|..|+||++.|+..|..+.+.||+.+| +.+...+..+.+++.+|=+.|+.+++..|.+.
T Consensus         4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~   68 (223)
T KOG2384|consen    4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN   68 (223)
T ss_pred             CccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence            45555555555555555555555555555555 55555555555555555555555555555554

>KOG0521|consensus

Probab=98.14  E-value=2.8e-06  Score=88.50  Aligned_cols=88  Identities=27%  Similarity=0.339  Sum_probs=78.5

Q ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Q psy11819        526 KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRAR  605 (651)
Q Consensus       526 ~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~  605 (651)
                      ..|.++||.|+..+...++++|+++|+++|..|..|+||+|.+...|+...+..|+++|++.++.+..|.+++++|....
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~  733 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAA  733 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhc
Confidence            35689999999999999999999999999999999999999999999999999999999999999999999999997776


Q ss_pred             ChHHHHHH
Q psy11819        606 SKTIVEVF  613 (651)
Q Consensus       606 ~~~~~~~L  613 (651)
                      +-+++-++
T Consensus       734 ~~d~~~l~  741 (785)
T KOG0521|consen  734 NADIVLLL  741 (785)
T ss_pred             cccHHHHH
Confidence            65555443

>KOG0522|consensus

Probab=98.13  E-value=7.7e-06  Score=77.71  Aligned_cols=86  Identities=27%  Similarity=0.243  Sum_probs=57.7

Q ss_pred             HHHHHHHcCcHHHHHHHH--hCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHH
Q psy11819        465 ALTIACKDGYYEIAVLLL--NSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVP  542 (651)
Q Consensus       465 ~l~~A~~~~~~~~~~~Ll--~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~  542 (651)
                      |+|.++-....+-+...+  +....++..|..|.||||.|+.-|+.+.++.|+..|+++..+|.+|+++||-|+..|+.+
T Consensus        23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q  102 (560)
T KOG0522|consen   23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQ  102 (560)
T ss_pred             ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHH
Confidence            466666655554433322  234556666777777777777777777777777777777777777777777777777777


Q ss_pred             HHHHHHhc
Q psy11819        543 ILKLLLTA  550 (651)
Q Consensus       543 ~v~~Ll~~  550 (651)
                      ++..++.+
T Consensus       103 ~i~~vlr~  110 (560)
T KOG0522|consen  103 IITEVLRH  110 (560)
T ss_pred             HHHHHHHH
Confidence            66666554

>KOG0511|consensus

Probab=98.07  E-value=1.2e-05  Score=72.75  Aligned_cols=55  Identities=16%  Similarity=0.317  Sum_probs=27.7

Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy11819        532 VYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAK  586 (651)
Q Consensus       532 l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  586 (651)
                      |..|++.|+.+.|++|++.|.++|..|+...+||.+|+..||.++||+|+++||-
T Consensus        40 lceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAi   94 (516)
T KOG0511|consen   40 LCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAI   94 (516)
T ss_pred             HHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCc
Confidence            3444555555555555555555555555445555555555555555555555543

>KOG0521|consensus

Probab=97.90  E-value=1.2e-05  Score=83.85  Aligned_cols=84  Identities=36%  Similarity=0.395  Sum_probs=56.6

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcCC
Q psy11819        156 NGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGH  235 (651)
Q Consensus       156 ~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~  235 (651)
                      .|.|+||.|+..|..-+++.|+++|++++..|..|++|+|.+...|+......|+++|++.+..+.+|.+++.+|....+
T Consensus       655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~  734 (785)
T KOG0521|consen  655 IGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAAN  734 (785)
T ss_pred             cccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhcc
Confidence            45667777777777777777777777777677777777777777777777777777777766666677777766655544


Q ss_pred             HHHH
Q psy11819        236 TDTV  239 (651)
Q Consensus       236 ~~~v  239 (651)
                      .+.+
T Consensus       735 ~d~~  738 (785)
T KOG0521|consen  735 ADIV  738 (785)
T ss_pred             ccHH
Confidence            4443

>KOG0520|consensus

Probab=97.83  E-value=2.6e-05  Score=80.87  Aligned_cols=128  Identities=13%  Similarity=0.014  Sum_probs=97.7

Q ss_pred             cccCCCCCcHHHHHHhcCcHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHH
Q psy11819        489 NIQDRSGDSNLIHAVKGGHRGIVEALLKK-YVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLK  567 (651)
Q Consensus       489 ~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~  567 (651)
                      ......|.+.+|.+...++..+++.+++- +......+.+|.-.+|.++..|..-.+....-.|..++++|..|+||||+
T Consensus       568 ~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~w  647 (975)
T KOG0520|consen  568 SSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHW  647 (975)
T ss_pred             ccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccch
Confidence            44455678889999999999999888884 66666667777888888555444334444445577788999999999999


Q ss_pred             HHHcCCHHHHHHHHHcCCCCc------ccCCCCCcHHHHHHHcCChHHHHHHHhC
Q psy11819        568 AVKTRNLEAIQMLIDKKAKIT------AVDKRGDTVLHIAMRARSKTIVEVFIRN  616 (651)
Q Consensus       568 A~~~~~~~~v~~Ll~~ga~~~------~~d~~g~t~l~~A~~~~~~~~~~~Ll~~  616 (651)
                      |..+|+..++..|++.|++..      ..+-.|.|+-..|..+|+..+.-+|-+.
T Consensus       648 Aa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  648 AAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             HhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            999999999999998776543      3345688999999999999888877654

>KOG0520|consensus

Probab=97.69  E-value=5.7e-05  Score=78.47  Aligned_cols=129  Identities=16%  Similarity=0.084  Sum_probs=102.6

Q ss_pred             CCCCCCCCCcHHHHHHHcCcHHHHHHHHhC-CCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHH
Q psy11819        455 VNALDKDGCTALTIACKDGYYEIAVLLLNS-GAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVY  533 (651)
Q Consensus       455 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~  533 (651)
                      .......|.+.+|+++..++.-+++.+++. |......|..|...+|.++..+..-.+..+.-.|..++++|..|+||||
T Consensus       567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~  646 (975)
T KOG0520|consen  567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLH  646 (975)
T ss_pred             cccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccc
Confidence            334456788999999999999999999986 6666667777888888866666555555555678999999999999999


Q ss_pred             HHHHcCCHHHHHHHHhcCCCccc------cCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy11819        534 TAVEKGNVPILKLLLTANPDLEI------ATKDGDTPLLKAVKTRNLEAIQMLIDK  583 (651)
Q Consensus       534 ~A~~~~~~~~v~~Ll~~~~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~  583 (651)
                      +|+..|+..++..|.+.|++.++      .+-.|.|+-..|-.+|+..+.-+|-+.
T Consensus       647 wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  647 WAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             hHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            99999999999999998876443      233588999999999988887777654

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=97.58  E-value=0.0009  Score=54.89  Aligned_cols=72  Identities=11%  Similarity=0.089  Sum_probs=46.6

Q ss_pred             chHHHHhhcCcHHHHHHHHhhcCCccCCCCccchhhhhhhhccCCchHHHHHHHhhCCCCCccccchHHHHHHhcCCHHH
Q psy11819         16 SNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPI   95 (651)
Q Consensus        16 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~l~~A~~~~~~~i~~~Ll~~~~~~~~~~~~~~l~~A~~~g~~~~   95 (651)
                      -.|.+|++++.+.|+++.-+....     +......-+..||+..+.|||++.-++-   ...+-.+.+..|....++++
T Consensus        48 CLl~HAVk~nmL~ILqkyke~L~~-----~~~~~q~LFElAC~~qkydiV~WI~qnL---~i~~~~~iFdIA~~~kDlsL  119 (192)
T PF03158_consen   48 CLLYHAVKYNMLSILQKYKEDLEN-----ERYLNQELFELACEEQKYDIVKWIGQNL---HIYNPEDIFDIAFAKKDLSL  119 (192)
T ss_pred             HHHHHHHHcCcHHHHHHHHHHhhc-----chhHHHHHHHHHHHHccccHHHHHhhcc---CCCCchhhhhhhhhccchhH
Confidence            457778888888888776654322     1234457777888888888888874442   22344566777777777776

These proteins may be involved in promoting survival of infected macrophages [].

>smart00248 ANK ankyrin repeats

Probab=97.18  E-value=0.00051  Score=38.34  Aligned_cols=29  Identities=31%  Similarity=0.467  Sum_probs=26.0

Q ss_pred             CCCchHHHHhhcCcHHHHHHHHhhcCCcc
Q psy11819         13 SGDSNLIHAVKGGHRGIVEALLKKYVDVD   41 (651)
Q Consensus        13 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~   41 (651)
                      .|+|+|+.|+..|+.+++++|++.|.+++
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            47899999999999999999999987653

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG2505|consensus

Probab=97.16  E-value=0.00066  Score=64.35  Aligned_cols=66  Identities=11%  Similarity=0.041  Sum_probs=53.4

Q ss_pred             CCHHHHHHHHhcCCCccc------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Q psy11819        539 GNVPILKLLLTANPDLEI------ATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRA  604 (651)
Q Consensus       539 ~~~~~v~~Ll~~~~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~  604 (651)
                      .-...+++|.+++.+.|.      .+..--|+||+|+..|.-++|.+||+.|+|+...|..|+||..++...
T Consensus       402 ~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~nk  473 (591)
T KOG2505|consen  402 PEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSANK  473 (591)
T ss_pred             CchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccccH
Confidence            347788999998887653      233356899999999999999999999999999999999999988743

>KOG2505|consensus

Probab=97.03  E-value=0.00097  Score=63.28  Aligned_cols=62  Identities=19%  Similarity=0.180  Sum_probs=41.6

Q ss_pred             HHHHHHHHhcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q psy11819        508 RGIVEALLKKYVDVDI------PGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAV  569 (651)
Q Consensus       508 ~~~v~~Ll~~~~~~~~------~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~  569 (651)
                      ...+++|.+++++.|.      .+.-..|+||+|+..|..++|.+||+.|+|+-..|..|+||.+.+.
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence            5567777776665542      2223457777777777777777777777777777777777777655

>smart00248 ANK ankyrin repeats

Probab=96.84  E-value=0.0022  Score=35.59  Aligned_cols=27  Identities=48%  Similarity=0.728  Sum_probs=14.7

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCC
Q psy11819        561 GDTPLLKAVKTRNLEAIQMLIDKKAKI  587 (651)
Q Consensus       561 g~t~L~~A~~~~~~~~v~~Ll~~ga~~  587 (651)
                      |.||+|+|+..++.+++++|++.|.++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~   28 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADI   28 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            445555555555555555555555443

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=96.64  E-value=0.024  Score=46.82  Aligned_cols=53  Identities=11%  Similarity=-0.023  Sum_probs=44.1

Q ss_pred             hhhhhhhhccCCchHHHHHHHhhCCCCCccccchHHHHHHhcCCHHHHHHHHHc
Q psy11819         49 LSDALNVTDANDQRSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTA  102 (651)
Q Consensus        49 ~~~~l~~A~~~~~~~i~~~Ll~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~  102 (651)
                      ...-+..|++.+.++|+...-+..... .....+-...||+.-+.|+|+|.-+.
T Consensus        46 ~~CLl~HAVk~nmL~ILqkyke~L~~~-~~~~q~LFElAC~~qkydiV~WI~qn   98 (192)
T PF03158_consen   46 MWCLLYHAVKYNMLSILQKYKEDLENE-RYLNQELFELACEEQKYDIVKWIGQN   98 (192)
T ss_pred             HHHHHHHHHHcCcHHHHHHHHHHhhcc-hhHHHHHHHHHHHHccccHHHHHhhc
Confidence            457888999999999999988776543 34667889999999999999999654

These proteins may be involved in promoting survival of infected macrophages [].

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=96.12  E-value=0.06  Score=45.97  Aligned_cols=46  Identities=28%  Similarity=0.331  Sum_probs=30.1

Q ss_pred             CHHHHHHHHHcC-CCCcc---cCCCCCCHHHHHHHhCCHHHHHHHHHcCC
Q psy11819        169 KLSFVRELVTRG-ADVNA---EDNDNWSPLTYAAREGYTDVCAELLDHGA  214 (651)
Q Consensus       169 ~~~~v~~Ll~~~-~~~~~---~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~  214 (651)
                      +..++++++++| +++|.   +-..|.|.|.-|...++-|++..|+++|+
T Consensus       229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence            456667777766 33443   23457777777777777777777777776

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=95.57  E-value=0.029  Score=40.09  Aligned_cols=65  Identities=20%  Similarity=0.245  Sum_probs=44.1

Q ss_pred             chHHHHhhcCcHHHHHHHHhhcCCccCCCCccchhhhhhhhccCCchHHHHHHHhhCCCCCccccchHHHHHHhcCCHHH
Q psy11819         16 SNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPI   95 (651)
Q Consensus        16 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~l~~A~~~~~~~i~~~Ll~~~~~~~~~~~~~~l~~A~~~g~~~~   95 (651)
                      .-|..|+..|+.||++.+++.+ .++        ...+..|+..-+-+++++|+++... .     -++..++..++++.
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~-~~~--------~~~l~~AI~~H~n~i~~~l~~~y~~-~-----i~~~~~~~~~N~~a   72 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKN-KPD--------NDCLEYAIKSHNNEIADWLIENYNL-K-----ISISDCLKYYNLRA   72 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHh-ccH--------HHHHHHHHHHhhHHHHHHHHHhcCC-C-----cCHHHHHHHCChHh
Confidence            5678899999999999888765 221        3677788888888888888777422 1     13444556666554

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=95.46  E-value=0.092  Score=44.87  Aligned_cols=45  Identities=16%  Similarity=0.372  Sum_probs=22.9

Q ss_pred             HHHHHHHHcC-CCCccc---CCCCCcHHHHHHHcCChHHHHHHHhCCCC
Q psy11819        575 EAIQMLIDKK-AKITAV---DKRGDTVLHIAMRARSKTIVEVFIRNPKN  619 (651)
Q Consensus       575 ~~v~~Ll~~g-a~~~~~---d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~  619 (651)
                      .++++++++| ++++..   -+.|.|.|.-|+++++.+++.+|+++|+.
T Consensus       231 kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  231 KVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             HHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence            4445555554 333322   33455555555555555555555555553

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=94.20  E-value=0.1  Score=37.26  Aligned_cols=46  Identities=15%  Similarity=0.307  Sum_probs=26.1

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHc
Q psy11819        160 ALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDH  212 (651)
Q Consensus       160 ~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~  212 (651)
                      .+..|+..|+.|+++.+++.+ .++      ...+..|+...+.++++||++.
T Consensus         9 tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    9 TLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence            556666666666666666543 111      1256666666666666666654

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PLN03218 maturation of RBCL 1; Provisional

Probab=93.59  E-value=5.6  Score=44.95  Aligned_cols=75  Identities=12%  Similarity=0.049  Sum_probs=32.6

Q ss_pred             hhcCcHHHHHHHHhhcCCccCCCCccchhhhhhhhccCCchHHHHHHHhh----CCCCCccccchHHHHHHhcCCHHHHH
Q psy11819         22 VKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDK----NKHKSLKERKTAVYTAVEKGNVPILK   97 (651)
Q Consensus        22 ~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~l~~A~~~~~~~i~~~Ll~~----~~~~~~~~~~~~l~~A~~~g~~~~v~   97 (651)
                      ++.|..+-..-+.......+    ....+..+...+..|+.+-...+++.    +...+.....+.+...++.|+++.+.
T Consensus       417 ~~~g~~~eAl~lf~~M~~pd----~~Tyn~LL~a~~k~g~~e~A~~lf~~M~~~Gl~pD~~tynsLI~~y~k~G~vd~A~  492 (1060)
T PLN03218        417 KKQRAVKEAFRFAKLIRNPT----LSTFNMLMSVCASSQDIDGALRVLRLVQEAGLKADCKLYTTLISTCAKSGKVDAMF  492 (1060)
T ss_pred             HHCCCHHHHHHHHHHcCCCC----HHHHHHHHHHHHhCcCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCcCHHHHH
Confidence            34455554444444433322    12334455555566665544444333    22222122223444446666655444


Q ss_pred             HHH
Q psy11819         98 LLL  100 (651)
Q Consensus        98 ~Ll  100 (651)
                      .++
T Consensus       493 ~vf  495 (1060)
T PLN03218        493 EVF  495 (1060)
T ss_pred             HHH
Confidence            433

>PLN03218 maturation of RBCL 1; Provisional

Probab=89.72  E-value=42  Score=38.30  Aligned_cols=50  Identities=4%  Similarity=0.011  Sum_probs=23.4

Q ss_pred             hHHHHhhcCcHHHHHHHH----hhcCCccCCCCccchhhhhhhhccCCchHHHHHHHh
Q psy11819         17 NLIHAVKGGHRGIVEALL----KKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLD   70 (651)
Q Consensus        17 ~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~~~~~~~~~l~~A~~~~~~~i~~~Ll~   70 (651)
                      .|...++.|+.+-+..++    +.|...|.    ...+..+...++.|+.+-+..+++
T Consensus       443 LL~a~~k~g~~e~A~~lf~~M~~~Gl~pD~----~tynsLI~~y~k~G~vd~A~~vf~  496 (1060)
T PLN03218        443 LMSVCASSQDIDGALRVLRLVQEAGLKADC----KLYTTLISTCAKSGKVDAMFEVFH  496 (1060)
T ss_pred             HHHHHHhCcCHHHHHHHHHHHHHcCCCCCH----HHHHHHHHHHHhCcCHHHHHHHHH
Confidence            344445555555444443    34433332    233455555556666664444433

>PLN03077 Protein ECB2; Provisional

Probab=86.98  E-value=59  Score=36.65  Aligned_cols=171  Identities=14%  Similarity=0.021  Sum_probs=80.7

Q ss_pred             HHHHHHHcCCHHHH----HHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHH-HHHHHcC
Q psy11819        399 PLVWACRKGHVEIV----DILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTAL-TIACKDG  473 (651)
Q Consensus       399 ~l~~A~~~~~~~~v----~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l-~~A~~~~  473 (651)
                      .|...+..|.++..    ..+++.|..++..  .....+..-+..|+.+-...+++.-    ..|...++.+ ...++.|
T Consensus       495 lL~a~~~~g~l~~~~~i~~~~~~~g~~~~~~--~~naLi~~y~k~G~~~~A~~~f~~~----~~d~~s~n~lI~~~~~~G  568 (857)
T PLN03077        495 ALSACARIGALMCGKEIHAHVLRTGIGFDGF--LPNALLDLYVRCGRMNYAWNQFNSH----EKDVVSWNILLTGYVAHG  568 (857)
T ss_pred             HHHHHhhhchHHHhHHHHHHHHHhCCCccce--echHHHHHHHHcCCHHHHHHHHHhc----CCChhhHHHHHHHHHHcC
Confidence            44444555555443    4444556554422  2334445556667766555555432    2232333333 3344566


Q ss_pred             cHH----HHHHHHhCCCCCcccCCCCCcHHHHHH-hcCcHHH----HHHHH-hcCCCCCCCCCCCCCHHHHHHHcCCHHH
Q psy11819        474 YYE----IAVLLLNSGAYINIQDRSGDSNLIHAV-KGGHRGI----VEALL-KKYVDVDIPGKERKTAVYTAVEKGNVPI  543 (651)
Q Consensus       474 ~~~----~~~~Ll~~g~~~~~~~~~~~t~l~~A~-~~~~~~~----v~~Ll-~~~~~~~~~~~~g~t~l~~A~~~~~~~~  543 (651)
                      ..+    +++.+.+.|..++..   ..+.+..|+ ..|..+-    ++.+. +.|..++...  -...+..-++.|..+-
T Consensus       569 ~~~~A~~lf~~M~~~g~~Pd~~---T~~~ll~a~~~~g~v~ea~~~f~~M~~~~gi~P~~~~--y~~lv~~l~r~G~~~e  643 (857)
T PLN03077        569 KGSMAVELFNRMVESGVNPDEV---TFISLLCACSRSGMVTQGLEYFHSMEEKYSITPNLKH--YACVVDLLGRAGKLTE  643 (857)
T ss_pred             CHHHHHHHHHHHHHcCCCCCcc---cHHHHHHHHhhcChHHHHHHHHHHHHHHhCCCCchHH--HHHHHHHHHhCCCHHH
Confidence            654    455555666655433   233343333 3455543    34444 3444443211  0122233346777665


Q ss_pred             HHHHHhc-CCCccccCCCCCcHHHHHHH-cCCHHHHHHHHHc
Q psy11819        544 LKLLLTA-NPDLEIATKDGDTPLLKAVK-TRNLEAIQMLIDK  583 (651)
Q Consensus       544 v~~Ll~~-~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~  583 (651)
                      ...+++. ...+   |..-+++|..|+. +++.++.+...++
T Consensus       644 A~~~~~~m~~~p---d~~~~~aLl~ac~~~~~~e~~e~~a~~  682 (857)
T PLN03077        644 AYNFINKMPITP---DPAVWGALLNACRIHRHVELGELAAQH  682 (857)
T ss_pred             HHHHHHHCCCCC---CHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence            5555554 2222   2233455665654 5777776655443

>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional

Probab=85.84  E-value=59  Score=35.56  Aligned_cols=273  Identities=11%  Similarity=0.070  Sum_probs=145.6

Q ss_pred             hHHHHhhcCc----HHHHHHHHhhc-CCccCCCCccchhhhhhhhccCCchHHHHHHHh----hCCCCCccccchHHHHH
Q psy11819         17 NLIHAVKGGH----RGIVEALLKKY-VDVDIPGKVRKLSDALNVTDANDQRSTTRNLLD----KNKHKSLKERKTAVYTA   87 (651)
Q Consensus        17 ~L~~A~~~g~----~~~v~~Ll~~g-~~~~~~~~~~~~~~~l~~A~~~~~~~i~~~Ll~----~~~~~~~~~~~~~l~~A   87 (651)
                      .+..-++.|+    +++.+++...+ ...+.    ......+...+..++.+..+.+..    .+...........+..-
T Consensus        93 ~i~~l~~~g~~~~Al~~f~~m~~~~~~~~~~----~t~~~ll~a~~~~~~~~~a~~l~~~m~~~g~~~~~~~~n~Li~~y  168 (697)
T PLN03081         93 QIEKLVACGRHREALELFEILEAGCPFTLPA----STYDALVEACIALKSIRCVKAVYWHVESSGFEPDQYMMNRVLLMH  168 (697)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHhcCCCCCCH----HHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCcchHHHHHHHHHH
Confidence            3444456666    44455555443 22221    233445555556666654444443    34333323334555566


Q ss_pred             HhcCCHHHHHHHHHcCCChhhhhccCCCCchhhHHHHhhH-HHHHHhhCHHHHHHHHHcCCCCCCCCCCCCCc-HHHHHH
Q psy11819         88 VEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTL-QSYIAEDNLDSLQTFLENKRTVADDRDDNGGT-ALMFAA  165 (651)
Q Consensus        88 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~t-~l~~A~  165 (651)
                      ++.|+++-...+++.-+..+.             ..+..+ ...+..|+.+....++..-.......+....+ .+..++
T Consensus       169 ~k~g~~~~A~~lf~~m~~~~~-------------~t~n~li~~~~~~g~~~~A~~lf~~M~~~g~~p~~~t~~~ll~a~~  235 (697)
T PLN03081        169 VKCGMLIDARRLFDEMPERNL-------------ASWGTIIGGLVDAGNYREAFALFREMWEDGSDAEPRTFVVMLRASA  235 (697)
T ss_pred             hcCCCHHHHHHHHhcCCCCCe-------------eeHHHHHHHHHHCcCHHHHHHHHHHHHHhCCCCChhhHHHHHHHHh
Confidence            888999999999987654321             123333 34466677766666654432222222333333 444555


Q ss_pred             HcCCHHHHHHH----HHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHH-HHHHcCCHH---
Q psy11819        166 QKGKLSFVREL----VTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLM-WASYKGHTD---  237 (651)
Q Consensus       166 ~~g~~~~v~~L----l~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~-~A~~~~~~~---  237 (651)
                      ..|..+..+.+    .+.|...+..  ...+.+..-++.|..+-...+++.-...   +...++.|. .-+..|..+   
T Consensus       236 ~~~~~~~~~~l~~~~~~~g~~~d~~--~~n~Li~~y~k~g~~~~A~~vf~~m~~~---~~vt~n~li~~y~~~g~~~eA~  310 (697)
T PLN03081        236 GLGSARAGQQLHCCVLKTGVVGDTF--VSCALIDMYSKCGDIEDARCVFDGMPEK---TTVAWNSMLAGYALHGYSEEAL  310 (697)
T ss_pred             cCCcHHHHHHHHHHHHHhCCCccce--eHHHHHHHHHHCCCHHHHHHHHHhCCCC---ChhHHHHHHHHHHhCCCHHHHH
Confidence            66666655544    4455543221  2234566677889988777777754332   333444443 345566654   


Q ss_pred             -HHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHH----HHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q psy11819        238 -TVALLLDKNADVNAHGNYHISSLIWAAGRGYTEI----VALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKA  312 (651)
Q Consensus       238 -~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~----v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~  312 (651)
                       +++.+.+.|..++....  .+.+...+..|..+-    ...+.+.|...+..   ...+.+..-+..|+.+-+..+++.
T Consensus       311 ~lf~~M~~~g~~pd~~t~--~~ll~a~~~~g~~~~a~~i~~~m~~~g~~~d~~---~~~~Li~~y~k~G~~~~A~~vf~~  385 (697)
T PLN03081        311 CLYYEMRDSGVSIDQFTF--SIMIRIFSRLALLEHAKQAHAGLIRTGFPLDIV---ANTALVDLYSKWGRMEDARNVFDR  385 (697)
T ss_pred             HHHHHHHHcCCCCCHHHH--HHHHHHHHhccchHHHHHHHHHHHHhCCCCCee---ehHHHHHHHHHCCCHHHHHHHHHh
Confidence             33444456766654321  133444455666554    44445555544332   234556666788998888888876


Q ss_pred             CCCc
Q psy11819        313 GANV  316 (651)
Q Consensus       313 ~~~~  316 (651)
                      -...
T Consensus       386 m~~~  389 (697)
T PLN03081        386 MPRK  389 (697)
T ss_pred             CCCC
Confidence            5543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	651
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		7e-33
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		1e-12
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		5e-28
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		2e-22
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		7e-16
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		8e-15
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		1e-11
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		5e-28
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-18
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-17
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-13
2xee_A	157	Structural Determinants For Improved Thermal Stabil		4e-26
2xee_A	157	Structural Determinants For Improved Thermal Stabil		3e-21
2xee_A	157	Structural Determinants For Improved Thermal Stabil		4e-16
2xee_A	157	Structural Determinants For Improved Thermal Stabil		5e-14
2xee_A	157	Structural Determinants For Improved Thermal Stabil		1e-12
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-25
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-18
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		8e-18
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-14
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-24
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		7e-17
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		4e-16
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-12
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		2e-24
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		9e-18
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		4e-10
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		7e-10
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		3e-08
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		2e-24
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		4e-09
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		1e-23
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		5e-20
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		7e-15
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		7e-14
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		1e-12
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		5e-23
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		9e-19
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		7e-11
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		1e-08
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		9e-23
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		8e-21
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		3e-11
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		7e-09
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		9e-23
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		3e-18
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		1e-11
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		3e-11
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		4e-10
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-22
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		5e-17
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-16
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-11
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		3e-22
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		1e-16
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		2e-11
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		2e-21
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		1e-17
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		2e-09
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		7e-09
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		2e-07
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		2e-21
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		2e-18
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		4e-10
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		1e-09
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		2e-08
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		4e-21
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		3e-20
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		1e-16
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		3e-15
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		3e-12
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		6e-21
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		2e-17
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		6e-10
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		2e-07
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		1e-20
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		8e-18
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		1e-11
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		4e-08
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		3e-20
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		1e-19
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		7e-10
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		7e-20
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		2e-16
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		1e-09
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		3e-09
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		1e-19
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		3e-16
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		2e-09
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		5e-09
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		2e-19
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		7e-19
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		2e-10
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		3e-19
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		7e-14
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		4e-09
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		8e-08
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		1e-18
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		8e-12
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		1e-18
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		9e-12
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		2e-18
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		2e-12
1uoh_A	226	Human Gankyrin Length = 226		2e-18
1uoh_A	226	Human Gankyrin Length = 226		2e-12
3eu9_A	240	The Ankyrin Repeat Domain Of Huntingtin Interacting		3e-18
3eu9_A	240	The Ankyrin Repeat Domain Of Huntingtin Interacting		9e-11
3hra_A	201	Crystal Structure Of Ef0377 An Ankyrin Repeat Prote		1e-17
3hra_A	201	Crystal Structure Of Ef0377 An Ankyrin Repeat Prote		1e-08
3hra_A	201	Crystal Structure Of Ef0377 An Ankyrin Repeat Prote		6e-08
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		1e-17
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		2e-09
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		2e-17
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		3e-10
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		4e-10
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		1e-07
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		2e-17
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		1e-14
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		2e-11
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		2e-17
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		7e-16
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		2e-08
4g8k_A	337	Intact Sensor Domain Of Human Rnase L In The Inacti		3e-17
4g8k_A	337	Intact Sensor Domain Of Human Rnase L In The Inacti		4e-16
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		4e-16
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		3e-11
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		2e-09
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		2e-08
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		2e-15
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		4e-14
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		1e-07
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		6e-15
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		1e-14
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		3e-12
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		1e-10
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		5e-05
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		2e-14
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		6e-10
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		4e-04
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		3e-14
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		5e-10
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		5e-04
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		4e-14
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		3e-10
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		2e-04
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		4e-13
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		4e-12
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		4e-09
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		9e-05
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		5e-13
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		2e-09
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		3e-07
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		7e-13
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		1e-12
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		5e-07
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		4e-04
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		2e-12
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		8e-12
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		2e-09
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		9e-09
3so8_A	162	Crystal Structure Of Ankra Length = 162		2e-12
3so8_A	162	Crystal Structure Of Ankra Length = 162		8e-12
3so8_A	162	Crystal Structure Of Ankra Length = 162		1e-09
3so8_A	162	Crystal Structure Of Ankra Length = 162		7e-09
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		2e-12
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		7e-12
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		1e-09
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		8e-09
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		3e-12
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		2e-06
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		4e-04
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		3e-12
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		5e-09
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		5e-07
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		4e-12
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		6e-12
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		9e-12
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		1e-08
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		9e-06
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		8e-12
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		8e-08
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		3e-04
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		9e-12
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		7e-08
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		2e-04
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		1e-11
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		3e-09
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		6e-08
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		2e-04
1ikn_D	236	IkappabalphaNF-Kappab Complex Length = 236		1e-11
1ikn_D	236	IkappabalphaNF-Kappab Complex Length = 236		9e-04
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		2e-11
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		5e-11
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		4e-08
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		6e-05
1k1b_A	241	Crystal Structure Of The Ankyrin Repeat Domain Of B		1e-10
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		1e-10
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		5e-09
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		2e-04
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		2e-10
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		4e-09
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		3e-10
1nfi_E	213	I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213		5e-10
1nfi_E	213	I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213		5e-04
1yyh_A	253	Crystal Structure Of The Human Notch 1 Ankyrin Doma		6e-10
1yyh_A	253	Crystal Structure Of The Human Notch 1 Ankyrin Doma		4e-06
2f8x_K	256	Crystal Structure Of Activated Notch, Csl And Maml		6e-10
2f8x_K	256	Crystal Structure Of Activated Notch, Csl And Maml		1e-06
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		6e-10
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		4e-09
2he0_A	253	Crystal Structure Of A Human Notch1 Ankyrin Domain		7e-10
2he0_A	253	Crystal Structure Of A Human Notch1 Ankyrin Domain		4e-06
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		8e-10
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		3e-09
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		9e-10
2f8y_A	223	Crystal Structure Of Human Notch1 Ankyrin Repeats T		1e-09
2f8y_A	223	Crystal Structure Of Human Notch1 Ankyrin Repeats T		1e-04
2qc9_A	210	Mouse Notch 1 Ankyrin Repeat Intracellular Domain L		5e-09
2qc9_A	210	Mouse Notch 1 Ankyrin Repeat Intracellular Domain L		1e-04
1myo_A	118	Solution Structure Of Myotrophin, Nmr, 44 Structure		5e-09
1myo_A	118	Solution Structure Of Myotrophin, Nmr, 44 Structure		3e-07
1myo_A	118	Solution Structure Of Myotrophin, Nmr, 44 Structure		8e-04
3aaa_C	123	Crystal Structure Of Actin Capping Protein In Compl		9e-09
3aaa_C	123	Crystal Structure Of Actin Capping Protein In Compl		3e-07
2xen_A	91	Structural Determinants For Improved Thermal Stabil		9e-09
2xen_A	91	Structural Determinants For Improved Thermal Stabil		4e-07
2xen_A	91	Structural Determinants For Improved Thermal Stabil		8e-07
2xen_A	91	Structural Determinants For Improved Thermal Stabil		4e-04
2fo1_E	373	Crystal Structure Of The Csl-Notch-Mastermind Terna		1e-08
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		2e-08
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		5e-07
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		4e-08
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		5e-07
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		1e-06
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		6e-05
1bd8_A	156	Structure Of Cdk Inhibitor P19ink4d Length = 156		6e-08
1bd8_A	156	Structure Of Cdk Inhibitor P19ink4d Length = 156		3e-07
1bi8_B	166	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		6e-08
1bi8_B	166	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		4e-07
2dzn_A	228	Crystal Structure Analysis Of Yeast Nas6p Complexed		4e-07
1blx_B	166	P19ink4dCDK6 COMPLEX Length = 166		4e-07
1blx_B	166	P19ink4dCDK6 COMPLEX Length = 166		2e-04
1ap7_A	168	P19-Ink4d From Mouse, Nmr, 20 Structures Length = 1		5e-07
1ap7_A	168	P19-Ink4d From Mouse, Nmr, 20 Structures Length = 1		3e-04
1wg0_A	243	Structural Comparison Of Nas6p Protein Structures I		5e-07
1ixv_A	231	Crystal Structure Analysis Of Homolog Of Oncoprotei		5e-07
4hbd_A	276	Crystal Structure Of Kank2 Ankyrin Repeats Length =		6e-07
4hbd_A	276	Crystal Structure Of Kank2 Ankyrin Repeats Length =		1e-05
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		1e-06
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		3e-05
3ehq_A	222	Crystal Structure Of Human Osteoclast Stimulating F		1e-06
3ehq_A	222	Crystal Structure Of Human Osteoclast Stimulating F		8e-06
3ehq_A	222	Crystal Structure Of Human Osteoclast Stimulating F		9e-05
4f1p_A	368	Crystal Structure Of Mutant S554d For Arfgap And An		3e-06
3jue_A	368	Crystal Structure Of Arfgap And Ank Repeat Domain O		3e-06
3t9k_A	390	Crystal Structure Of Acap1 C-portion Mutant S554d F		3e-06
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		4e-06
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		9e-06
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		2e-04
1d9s_A	136	Tumor Suppressor P15(Ink4b) Structure By Comparativ		6e-06
1d9s_A	136	Tumor Suppressor P15(Ink4b) Structure By Comparativ		2e-04
1bu9_A	168	Solution Structure Of P18-Ink4c, 21 Structures Leng		6e-06
1ihb_A	162	Crystal Structure Of P18-Ink4c(Ink6) Length = 162		6e-06
1mx6_A	168	Structure Of P18ink4c (F92n) Length = 168		1e-05
1mx6_A	168	Structure Of P18ink4c (F92n) Length = 168		3e-04
1bi7_B	156	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		6e-05
1mx4_A	168	Structure Of P18ink4c (F82q) Length = 168		7e-05
1ycs_B	239	P53-53bp2 Complex Length = 239		7e-05
1ycs_B	239	P53-53bp2 Complex Length = 239		5e-04
4a63_B	239	Crystal Structure Of The P73-Aspp2 Complex At 2.6a		7e-05
4a63_B	239	Crystal Structure Of The P73-Aspp2 Complex At 2.6a		5e-04
1mx2_A	168	Structure Of F71n Mutant Of P18ink4c Length = 168		8e-05
1mx2_A	168	Structure Of F71n Mutant Of P18ink4c Length = 168		8e-04
1ymp_A	135	The Crystal Structure Of A Partial Mouse Notch-1 An		2e-04
2vge_A	229	Crystal Structure Of The C-Terminal Region Of Human		3e-04
1dc2_A	156	Solution Nmr Structure Of Tumor Suppressor P16ink4a		3e-04
1dc2_A	156	Solution Nmr Structure Of Tumor Suppressor P16ink4a		7e-04

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score =  139 bits (349), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 186/423 (43%), Gaps = 41/423 (9%)
Query: 191 WSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVN 250
            +PL  A+  G+  +   LL  GA     ++   +PL  A+  GHT+    LL   A VN
Sbjct: 15  LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 74
Query: 251 AHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILL 310
           A      + L  AA  G+T +V LL++  A  N+     G TPL  A R+GHVE V  LL
Sbjct: 75  AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTA-GHTPLHIAAREGHVETVLALL 133
Query: 311 KAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKH 370
           +  A+        + PL+                    + AK+G  +   L  L E   H
Sbjct: 134 EKEASQACMTKKGFTPLH--------------------VAAKYGKVRVAEL--LLERDAH 171
Query: 371 FERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCW 430
               G +                  G TPL  A    +++IV +LL  G +        +
Sbjct: 172 PNAAGKN------------------GLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGY 213
Query: 431 TPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINI 490
           TPL +A   N  EV   LL+Y  + NA    G T L +A ++G+ E+  LLL+  A  N+
Sbjct: 214 TPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNL 273
Query: 491 QDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTA 550
            ++SG + L    + GH  + + L+K  V VD   +   T ++ A   GN+ ++K LL  
Sbjct: 274 GNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQH 333
Query: 551 NPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIV 610
             D+   TK G +PL +A +  + + + +L+   A    V   G T L IA R    ++ 
Sbjct: 334 QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVT 393
Query: 611 EVF 613
           +V 
Sbjct: 394 DVL 396

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 9/180 (5%)
Query: 464 TALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDI 523
           T L +A   G+  I   LL  GA  N+ +   ++ L  A + GH  + + LL+    V+ 
Sbjct: 16  TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 75
Query: 524 PGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDK 583
             K+ +T ++ A   G+  ++KLLL  N +  +AT  G TPL  A +  ++E +  L++K
Sbjct: 76  KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 135
Query: 584 KAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGE---TPYSIDMNN 640
           +A    + K+G T LH+A +     + E+ +    +      PN AG+   TP  + +++
Sbjct: 136 EASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH------PNAAGKNGLTPLHVAVHH 189

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score =  122 bits (307), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 69/155 (44%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNA+D D ++PL  AAREG+ ++   LL  GAD+ 
Sbjct: 3   GKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 62
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
            +D  G++PL  A+ +GH + V +LL   ADVNA      + L  AA  G+ EIV +L+K
Sbjct: 63  AKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLK 122
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKA 312
            GA VN  DK +G TP   A R+GH +I ++L KA
Sbjct: 123 AGADVNAQDK-FGKTPFDLAIREGHEDIAEVLQKA 156

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/121 (45%), Positives = 78/121 (64%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL  A R+GH+EIV++LLKAGA+V+      +TPL +A      E+VE+LL+   +V
Sbjct: 35  GYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADV 94
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           NA DKDG T L +A ++G+ EI  +LL +GA +N QD+ G +    A++ GH  I E L 
Sbjct: 95  NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIREGHEDIAEVLQ 154
Query: 516 K 516
           K
Sbjct: 155 K 155

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 84/148 (56%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL A      + V +L+    +VNA DKDG T L +A ++G+ EI  +LL +GA +N +D
Sbjct: 6   LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 65
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP 552
           + G + L  A + GH  IVE LLK   DV+   K+  T ++ A  +G++ I+++LL A  
Sbjct: 66  KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 125
Query: 553 DLEIATKDGDTPLLKAVKTRNLEAIQML 580
           D+    K G TP   A++  + +  ++L
Sbjct: 126 DVNAQDKFGKTPFDLAIREGHEDIAEVL 153

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 82/148 (55%)
Query: 466 LTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPG 525
           L  A + G  +   +L+ +GA +N +D+ G + L  A + GH  IVE LLK   DV+   
Sbjct: 6   LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 65
Query: 526 KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKA 585
           K+  T ++ A  +G++ I+++LL A  D+    KDG TPL  A +  +LE +++L+   A
Sbjct: 66  KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 125
Query: 586 KITAVDKRGDTVLHIAMRARSKTIVEVF 613
            + A DK G T   +A+R   + I EV 
Sbjct: 126 DVNAQDKFGKTPFDLAIREGHEDIAEVL 153

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L+ A + G    V  L+    DV+   K+  T ++ A  +G++ I+++LL A  D+    
Sbjct: 6   LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 65
Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK 618
           KDG TPL  A +  +LE +++L+   A + A DK G T LH+A R     IVEV ++   
Sbjct: 66  KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 125
Query: 619 NNILLYRPNKAGETPYSIDMNNQKSILAQ 647
           +   +   +K G+TP+ + +      +A+
Sbjct: 126 D---VNAQDKFGKTPFDLAIREGHEDIAE 151

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score =  122 bits (307), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 69/157 (43%), Positives = 96/157 (61%), Gaps = 1/157 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G    V++L+  GADVNA D+D  +PL YAA+EG+ ++   L+  GAD+ 
Sbjct: 5   GKRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVN 64
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
            +D  G +PL +A+ +GH + V LL+ K ADVNA  +   + L +AA  G+ EIV LL+ 
Sbjct: 65  AKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLIS 124
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGA 314
           KGA VN  D   G TPL  A   G+ EIV +L K G 
Sbjct: 125 KGADVNTSDS-DGRTPLDLAREHGNEEIVKLLEKQGG 160

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 84/148 (56%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L+ A   G+ + V  L++ GA+V+ +     TPL  A      E+V+LL+    +VNA D
Sbjct: 8   LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKD 67
Query: 460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYV 519
            DG T L  A K+G+ EI  LL++ GA +N +D  G + L +A K GH+ IV+ L+ K  
Sbjct: 68  SDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGA 127
Query: 520 DVDIPGKERKTAVYTAVEKGNVPILKLL 547
           DV+    + +T +  A E GN  I+KLL
Sbjct: 128 DVNTSDSDGRTPLDLAREHGNEEIVKLL 155

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 86/148 (58%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           L+ A      + V+ L+E   +VNA D DG T L  A K+G+ EI  LL++ GA +N +D
Sbjct: 8   LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKD 67
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP 552
             G + L +A K GH+ IV+ L+ K  DV+    + +T ++ A ++G+  I+KLL++   
Sbjct: 68  SDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGA 127
Query: 553 DLEIATKDGDTPLLKAVKTRNLEAIQML 580
           D+  +  DG TPL  A +  N E +++L
Sbjct: 128 DVNTSDSDGRTPLDLAREHGNEEIVKLL 155

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 80/148 (54%)
Query: 466 LTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPG 525
           L  A ++G  +    L+ +GA +N  D  G + L +A K GH+ IV+ L+ K  DV+   
Sbjct: 8   LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKD 67
Query: 526 KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKA 585
            + +T ++ A ++G+  I+KLL++   D+     DG TPL  A K  + E +++LI K A
Sbjct: 68  SDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGA 127
Query: 586 KITAVDKRGDTVLHIAMRARSKTIVEVF 613
            +   D  G T L +A    ++ IV++ 
Sbjct: 128 DVNTSDSDGRTPLDLAREHGNEEIVKLL 155

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score =  116 bits (291), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 67/155 (43%), Positives = 94/155 (60%), Gaps = 1/155 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNA+D D ++PL  AAREG+ ++   LL  GAD+ 
Sbjct: 3   GKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 62
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
            +D  G++PL  A+ +GH + V +LL   ADVNA      + L  AA  G+ EIV +L+K
Sbjct: 63  AKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLK 122
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKA 312
            GA VN  DK +G TP   A   G+ +I ++L KA
Sbjct: 123 AGADVNAQDK-FGKTPFDLAIDNGNEDIAEVLQKA 156

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/121 (44%), Positives = 77/121 (63%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL  A R+GH+EIV++LLKAGA+V+      +TPL +A      E+VE+LL+   +V
Sbjct: 35  GYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADV 94
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           NA DKDG T L +A ++G+ EI  +LL +GA +N QD+ G +    A+  G+  I E L 
Sbjct: 95  NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIDNGNEDIAEVLQ 154
Query: 516 K 516
           K
Sbjct: 155 K 155

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 83/148 (56%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL A      + V +L+    +VNA DKDG T L +A ++G+ EI  +LL +GA +N +D
Sbjct: 6   LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 65
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP 552
           + G + L  A + GH  IVE LLK   DV+   K+  T ++ A  +G++ I+++LL A  
Sbjct: 66  KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 125
Query: 553 DLEIATKDGDTPLLKAVKTRNLEAIQML 580
           D+    K G TP   A+   N +  ++L
Sbjct: 126 DVNAQDKFGKTPFDLAIDNGNEDIAEVL 153

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 83/150 (55%)
Query: 466 LTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPG 525
           L  A + G  +   +L+ +GA +N +D+ G + L  A + GH  IVE LLK   DV+   
Sbjct: 6   LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 65
Query: 526 KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKA 585
           K+  T ++ A  +G++ I+++LL A  D+    KDG TPL  A +  +LE +++L+   A
Sbjct: 66  KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 125
Query: 586 KITAVDKRGDTVLHIAMRARSKTIVEVFIR 615
            + A DK G T   +A+   ++ I EV  +
Sbjct: 126 DVNAQDKFGKTPFDLAIDNGNEDIAEVLQK 155

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L+ A + G    V  L+    DV+   K+  T ++ A  +G++ I+++LL A  D+    
Sbjct: 6   LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 65
Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK 618
           KDG TPL  A +  +LE +++L+   A + A DK G T LH+A R     IVEV ++   
Sbjct: 66  KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 125
Query: 619 NNILLYRPNKAGETPYSIDMNNQKSILAQ 647
           +   +   +K G+TP+ + ++N    +A+
Sbjct: 126 D---VNAQDKFGKTPFDLAIDNGNEDIAE 151

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/157 (42%), Positives = 91/157 (57%), Gaps = 1/157 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G    V++L+  GADVNA D+D  +PL +AA  G+ +V   L+  GAD+ 
Sbjct: 5   GKRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVN 64
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
            +D  G +PL  A+  GH + V LL+ K ADVNA  +   + L  AA  G+ E+V LL+ 
Sbjct: 65  AKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLIS 124
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGA 314
           KGA VN  D   G TPL  A   G+ E+V +L K G 
Sbjct: 125 KGADVNTSDS-DGRTPLDLAREHGNEEVVKLLEKQGG 160

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 84/148 (56%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L+ A   G+ + V  L++ GA+V+ +     TPL  A      EVV+LL+    +VNA D
Sbjct: 8   LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKD 67
Query: 460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYV 519
            DG T L  A ++G+ E+  LL++ GA +N +D  G + L HA + GH+ +V+ L+ K  
Sbjct: 68  SDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA 127
Query: 520 DVDIPGKERKTAVYTAVEKGNVPILKLL 547
           DV+    + +T +  A E GN  ++KLL
Sbjct: 128 DVNTSDSDGRTPLDLAREHGNEEVVKLL 155

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 85/148 (57%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           L+ A      + V+ L+E   +VNA D DG T L  A ++G+ E+  LL++ GA +N +D
Sbjct: 8   LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKD 67
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP 552
             G + L HA + GH+ +V+ L+ K  DV+    + +T ++ A E G+  ++KLL++   
Sbjct: 68  SDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA 127
Query: 553 DLEIATKDGDTPLLKAVKTRNLEAIQML 580
           D+  +  DG TPL  A +  N E +++L
Sbjct: 128 DVNTSDSDGRTPLDLAREHGNEEVVKLL 155

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 79/148 (53%)
Query: 466 LTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPG 525
           L  A ++G  +    L+ +GA +N  D  G + L HA + GH+ +V+ L+ K  DV+   
Sbjct: 8   LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKD 67
Query: 526 KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKA 585
            + +T ++ A E G+  ++KLL++   D+     DG TPL  A +  + E +++LI K A
Sbjct: 68  SDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA 127
Query: 586 KITAVDKRGDTVLHIAMRARSKTIVEVF 613
            +   D  G T L +A    ++ +V++ 
Sbjct: 128 DVNTSDSDGRTPLDLAREHGNEEVVKLL 155

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/157 (42%), Positives = 89/157 (56%), Gaps = 1/157 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G    V++L+  GAD NA D+D  +PL YAA  G+ ++   LL  GAD  
Sbjct: 5   GKRLIEAAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPN 64
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
            +D  G +PL +A+  GH + V LLL K AD NA  +   + L +AA  G+ EIV LL+ 
Sbjct: 65  AKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLS 124
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGA 314
           KGA  N  D   G TPL  A   G+ EIV +L K G 
Sbjct: 125 KGADPNTSDS-DGRTPLDLAREHGNEEIVKLLEKQGG 160

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 80/148 (54%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L+ A   G+ + V  LL+ GA+ + +     TPL  A      E+V+LLL    + NA D
Sbjct: 8   LIEAAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKD 67
Query: 460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYV 519
            DG T L  A ++G+ EI  LLL+ GA  N +D  G + L +A + GH+ IV+ LL K  
Sbjct: 68  SDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGA 127
Query: 520 DVDIPGKERKTAVYTAVEKGNVPILKLL 547
           D +    + +T +  A E GN  I+KLL
Sbjct: 128 DPNTSDSDGRTPLDLAREHGNEEIVKLL 155

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 81/148 (54%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           L+ A      + V+ LLE   + NA D DG T L  A ++G+ EI  LLL+ GA  N +D
Sbjct: 8   LIEAAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKD 67
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP 552
             G + L +A + GH+ IV+ LL K  D +    + +T ++ A E G+  I+KLLL+   
Sbjct: 68  SDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGA 127
Query: 553 DLEIATKDGDTPLLKAVKTRNLEAIQML 580
           D   +  DG TPL  A +  N E +++L
Sbjct: 128 DPNTSDSDGRTPLDLAREHGNEEIVKLL 155

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 76/150 (50%)
Query: 466 LTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPG 525
           L  A ++G  +    LL +GA  N  D  G + L +A + GH+ IV+ LL K  D +   
Sbjct: 8   LIEAAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKD 67
Query: 526 KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKA 585
            + +T ++ A E G+  I+KLLL+   D      DG TPL  A +  + E +++L+ K A
Sbjct: 68  SDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGA 127
Query: 586 KITAVDKRGDTVLHIAMRARSKTIVEVFIR 615
                D  G T L +A    ++ IV++  +
Sbjct: 128 DPNTSDSDGRTPLDLAREHGNEEIVKLLEK 157

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score =  110 bits (276), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 91/154 (59%), Gaps = 1/154 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNA D+   +PL  AA  G+ ++   LL HGAD+ 
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVN 74
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
            RD  GW+PL  A+  GH + V +LL   ADVNA   Y ++ L  AA RG+ EIV +L+K
Sbjct: 75  ARDTDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLK 134
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK 311
            GA VN  DK +G T    +   G+ ++ +IL K
Sbjct: 135 HGADVNAQDK-FGKTAFDISIDNGNEDLAEILQK 167

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 88.6 bits (218), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 71/125 (56%)
Query: 392 HLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEY 451
           H   G+TPL  A   GH EIV++LLK GA+V+      WTPL +A      E+VE+LL+Y
Sbjct: 43  HDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAADNGHLEIVEVLLKY 102
Query: 452 KPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIV 511
             +VNA D  G T L +A   G+ EI  +LL  GA +N QD+ G +    ++  G+  + 
Sbjct: 103 GADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLA 162
Query: 512 EALLK 516
           E L K
Sbjct: 163 EILQK 167

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL A      + V +L+    +VNA D  G T L +A   G+ EI  +LL  GA +N +D
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARD 77
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP 552
             G + L  A   GH  IVE LLK   DV+       T ++ A ++G++ I+++LL    
Sbjct: 78  TDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGA 137
Query: 553 DLEIATKDGDTPLLKAVKTRNLEAIQML 580
           D+    K G T    ++   N +  ++L
Sbjct: 138 DVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER 528
           A + G  +   +L+ +GA +N  D  G + L  A   GH  IVE LLK   DV+    + 
Sbjct: 21  AARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDG 80
Query: 529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT 588
            T ++ A + G++ I+++LL    D+      G TPL  A    +LE +++L+   A + 
Sbjct: 81  WTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVN 140
Query: 589 AVDKRGDTVLHIAMRARSKTIVEVFIR 615
           A DK G T   I++   ++ + E+  +
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L+ A + G    V  L+    DV+    +  T ++ A   G+  I+++LL    D+    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARD 77
Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK 618
            DG TPL  A    +LE +++L+   A + A D  G T LH+A       IVEV +++  
Sbjct: 78  TDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGA 137
Query: 619 NNILLYRPNKAGETPYSIDMNNQKSILAQ 647
           +   +   +K G+T + I ++N    LA+
Sbjct: 138 D---VNAQDKFGKTAFDISIDNGNEDLAE 163

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 108/205 (52%), Gaps = 1/205 (0%)
Query: 398 TPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNA 457
           +PL  A   GHV+I  +L++AGAN+D       TPL+ A   N  E V+ L++    V+ 
Sbjct: 13  SPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDP 72
Query: 458 LDKDGCTALTIACKDGYYEIAVLLLNSGAY-INIQDRSGDSNLIHAVKGGHRGIVEALLK 516
            D +G T L +A K G+YE+   LL++G   +N QD  G + +I A +  H  +V+ LL 
Sbjct: 73  KDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLS 132
Query: 517 KYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEA 576
           K  D++I   E    ++ A   G V I ++LL A  DL      GD+PL  A +    + 
Sbjct: 133 KGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDC 192
Query: 577 IQMLIDKKAKITAVDKRGDTVLHIA 601
           + + + + + +T  +K G+T L  A
Sbjct: 193 VVLFLSRDSDVTLKNKEGETPLQCA 217

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 59/104 (56%)
Query: 518 YVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAI 577
           +++  +  + +++ ++ A E G+V I  +L+ A  +++  ++D  TPL++A +  +LEA+
Sbjct: 1   HMNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAV 60
Query: 578 QMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNI 621
           + LI   A +   D  G T LH+A +     +V+  + N + ++
Sbjct: 61  KYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDV 104

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 91/152 (59%), Gaps = 1/152 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNA+D D ++PL  AAREG+ ++   LL  GAD+ 
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 74
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
            +D  G++PL  A+ +GH + V +LL   ADVNA      + L  AA  G+ EIV +L+K
Sbjct: 75  AKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLK 134
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDIL 309
            GA VN  DK +G T    +   G+ ++ +IL
Sbjct: 135 AGADVNAQDK-FGKTAFDISIDNGNEDLAEIL 165

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 51/119 (42%), Positives = 76/119 (63%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL  A R+GH+EIV++LLKAGA+V+      +TPL +A      E+VE+LL+   +V
Sbjct: 47  GYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADV 106
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           NA DKDG T L +A ++G+ EI  +LL +GA +N QD+ G +    ++  G+  + E L
Sbjct: 107 NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 82/148 (55%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL A      + V +L+    +VNA DKDG T L +A ++G+ EI  +LL +GA +N +D
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 77
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP 552
           + G + L  A + GH  IVE LLK   DV+   K+  T ++ A  +G++ I+++LL A  
Sbjct: 78  KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 137
Query: 553 DLEIATKDGDTPLLKAVKTRNLEAIQML 580
           D+    K G T    ++   N +  ++L
Sbjct: 138 DVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 82/148 (55%)
Query: 466 LTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPG 525
           L  A + G  +   +L+ +GA +N +D+ G + L  A + GH  IVE LLK   DV+   
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 77
Query: 526 KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKA 585
           K+  T ++ A  +G++ I+++LL A  D+    KDG TPL  A +  +LE +++L+   A
Sbjct: 78  KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 137
Query: 586 KITAVDKRGDTVLHIAMRARSKTIVEVF 613
            + A DK G T   I++   ++ + E+ 
Sbjct: 138 DVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L+ A + G    V  L+    DV+   K+  T ++ A  +G++ I+++LL A  D+    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 77
Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK 618
           KDG TPL  A +  +LE +++L+   A + A DK G T LH+A R     IVEV ++   
Sbjct: 78  KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 137
Query: 619 NNILLYRPNKAGETPYSIDMNNQKSILAQ 647
           +   +   +K G+T + I ++N    LA+
Sbjct: 138 D---VNAQDKFGKTAFDISIDNGNEDLAE 163

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score =  106 bits (264), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 91/154 (59%), Gaps = 1/154 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNA D   W+PL  AA  G+ ++   LL +GAD+ 
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVN 74
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
            +D  G +PL  A+ +GH + V +LL   ADVNA  ++  + L  AA RG+ EIV +L+K
Sbjct: 75  AKDSLGVTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLK 134
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK 311
            GA VN  DK +G T    +   G+ ++ +IL K
Sbjct: 135 NGADVNAQDK-FGKTAFDISIDNGNEDLAEILQK 167

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 92.0 bits (227), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 83/152 (54%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L+ A R G  + V IL+  GA+V+      WTPL +A      E+VE+LL+   +VNA D
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKD 77
Query: 460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYV 519
             G T L +A + G+ EI  +LL +GA +N  D  G + L  A K GH  IVE LLK   
Sbjct: 78  SLGVTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGA 137
Query: 520 DVDIPGKERKTAVYTAVEKGNVPILKLLLTAN 551
           DV+   K  KTA   +++ GN  + ++L   N
Sbjct: 138 DVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 76/145 (52%)
Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER 528
           A + G  +   +L+ +GA +N +D +G + L  A   GH  IVE LLK   DV+      
Sbjct: 21  AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT 588
            T ++ A  +G++ I+++LL    D+  +   G TPL  A K  +LE +++L+   A + 
Sbjct: 81  VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 589 AVDKRGDTVLHIAMRARSKTIVEVF 613
           A DK G T   I++   ++ + E+ 
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L+ A + G    V  L+    DV+       T ++ A   G++ I+++LL    D+    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKD 77
Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK 618
             G TPL  A +  +LE +++L+   A + A D  G T LH+A +     IVEV ++N  
Sbjct: 78  SLGVTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGA 137
Query: 619 NNILLYRPNKAGETPYSIDMNNQKSILAQ 647
           +   +   +K G+T + I ++N    LA+
Sbjct: 138 D---VNAQDKFGKTAFDISIDNGNEDLAE 163

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score =  105 bits (262), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 92/154 (59%), Gaps = 1/154 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNA DN   +PL  AA  G+ ++   LL HGAD++
Sbjct: 15  GRKLLEAARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVD 74
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
             D+ G++PL  A+Y GH + V +LL   ADVNA  +  ++ L  AA  GY EIV +L+K
Sbjct: 75  ASDVFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLK 134
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK 311
            GA VN  DK +G T    +   G+ ++ +IL K
Sbjct: 135 HGADVNAQDK-FGKTAFDISIDNGNEDLAEILQK 167

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 99.0 bits (245), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 53/121 (43%), Positives = 76/121 (62%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           GTTPL  A   GH+EIV++LLK GA+VD + ++ +TPL +A      E+VE+LL+   +V
Sbjct: 47  GTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAYWGHLEIVEVLLKNGADV 106
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           NA+D DG T L +A K GY EI  +LL  GA +N QD+ G +    ++  G+  + E L 
Sbjct: 107 NAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166
Query: 516 K 516
           K
Sbjct: 167 K 167

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%)
Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER 528
           A + G  +   +L+ +GA +N  D +G + L  A   GH  IVE LLK   DVD      
Sbjct: 21  AARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFG 80
Query: 529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT 588
            T ++ A   G++ I+++LL    D+     DG TPL  A K   LE +++L+   A + 
Sbjct: 81  YTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVN 140
Query: 589 AVDKRGDTVLHIAMRARSKTIVEVF 613
           A DK G T   I++   ++ + E+ 
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 3/149 (2%)
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L+ A + G    V  L+    DV+       T ++ A   G++ I+++LL    D++ + 
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASD 77
Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK 618
             G TPL  A    +LE +++L+   A + A+D  G T LH+A +     IVEV +++  
Sbjct: 78  VFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGA 137
Query: 619 NNILLYRPNKAGETPYSIDMNNQKSILAQ 647
           +   +   +K G+T + I ++N    LA+
Sbjct: 138 D---VNAQDKFGKTAFDISIDNGNEDLAE 163

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score =  105 bits (261), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 90/152 (59%), Gaps = 1/152 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNA DND ++PL  AA  G+ ++   LL +GAD+ 
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVN 74
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
             D+ G +PL  A+  GH + V +LL   ADVNA+ N   + L  AA  G+ EIV +L+K
Sbjct: 75  ASDLTGITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLK 134
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDIL 309
            GA VN  DK +G T    +   G+ ++ +IL
Sbjct: 135 HGADVNAQDK-FGKTAFDISIDNGNEDLAEIL 165

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 72/119 (60%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL  A   GH+EIV++LLK GA+V+ + L   TPL +A      E+VE+LL++  +V
Sbjct: 47  GYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAATGHLEIVEVLLKHGADV 106
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           NA D DG T L +A K G+ EI  +LL  GA +N QD+ G +    ++  G+  + E L
Sbjct: 107 NAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 76/148 (51%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL A      + V +L+    +VNA D DG T L +A  +G+ EI  +LL +GA +N  D
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASD 77
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP 552
            +G + L  A   GH  IVE LLK   DV+    +  T ++ A + G++ I+++LL    
Sbjct: 78  LTGITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGA 137
Query: 553 DLEIATKDGDTPLLKAVKTRNLEAIQML 580
           D+    K G T    ++   N +  ++L
Sbjct: 138 DVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 73/145 (50%)
Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER 528
           A + G  +   +L+ +GA +N  D  G + L  A   GH  IVE LLK   DV+      
Sbjct: 21  AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT 588
            T ++ A   G++ I+++LL    D+     DG TPL  A K  +LE +++L+   A + 
Sbjct: 81  ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 589 AVDKRGDTVLHIAMRARSKTIVEVF 613
           A DK G T   I++   ++ + E+ 
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 3/149 (2%)
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L+ A + G    V  L+    DV+    +  T ++ A   G++ I+++LL    D+  + 
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASD 77
Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK 618
             G TPL  A  T +LE +++L+   A + A D  G T LH+A +     IVEV +++  
Sbjct: 78  LTGITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGA 137
Query: 619 NNILLYRPNKAGETPYSIDMNNQKSILAQ 647
           +   +   +K G+T + I ++N    LA+
Sbjct: 138 D---VNAQDKFGKTAFDISIDNGNEDLAE 163

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 87/157 (55%), Gaps = 1/157 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G    V++L+  GADVNA D+D  +PL  AA  G+ +V   LL  GAD  
Sbjct: 5   GKRLIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPN 64
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
            +D  G +PL  A+  GH + V LLL + AD NA  +   + L  AA  G+ E+V LL+ 
Sbjct: 65  AKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLS 124
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGA 314
           +GA  N  D   G TPL  A   G+ E+V +L K G 
Sbjct: 125 QGADPNTSDS-DGRTPLDLAREHGNEEVVKLLEKQGG 160

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 82/148 (55%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L+ A   G+ + V  LL+ GA+V+ +     TPL +A      EVV+LLL    + NA D
Sbjct: 8   LIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKD 67
Query: 460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYV 519
            DG T L +A ++G+ E+  LLL+ GA  N +D  G + L  A + GH+ +V+ LL +  
Sbjct: 68  SDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGA 127
Query: 520 DVDIPGKERKTAVYTAVEKGNVPILKLL 547
           D +    + +T +  A E GN  ++KLL
Sbjct: 128 DPNTSDSDGRTPLDLAREHGNEEVVKLL 155

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 82/148 (55%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           L+ A      + V+ LLE   +VNA D DG T L +A ++G+ E+  LLL+ GA  N +D
Sbjct: 8   LIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKD 67
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP 552
             G + L  A + GH+ +V+ LL +  D +    + KT ++ A E G+  ++KLLL+   
Sbjct: 68  SDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGA 127
Query: 553 DLEIATKDGDTPLLKAVKTRNLEAIQML 580
           D   +  DG TPL  A +  N E +++L
Sbjct: 128 DPNTSDSDGRTPLDLAREHGNEEVVKLL 155

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 76/150 (50%)
Query: 466 LTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPG 525
           L  A ++G  +    LL +GA +N  D  G + L  A + GH+ +V+ LL +  D +   
Sbjct: 8   LIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKD 67
Query: 526 KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKA 585
            + KT ++ A E G+  ++KLLL+   D      DG TPL  A +  + E +++L+ + A
Sbjct: 68  SDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGA 127
Query: 586 KITAVDKRGDTVLHIAMRARSKTIVEVFIR 615
                D  G T L +A    ++ +V++  +
Sbjct: 128 DPNTSDSDGRTPLDLAREHGNEEVVKLLEK 157

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/154 (41%), Positives = 89/154 (57%), Gaps = 1/154 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNAED+   +PL  AA +G+ ++   LL HGAD+ 
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVN 74
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
             D  G +PL  A+  GH + V +LL   ADVNA   Y  + L  AA  G+ EIV +L+K
Sbjct: 75  AADKMGDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLK 134
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK 311
            GA VN  DK +G T    +   G+ ++ +IL K
Sbjct: 135 YGADVNAQDK-FGKTAFDISIDNGNEDLAEILQK 167

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/121 (42%), Positives = 71/121 (58%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL  A  KGH+EIV++LLK GA+V+ A     TPL +A L    E+VE+LL+   +V
Sbjct: 47  GKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMGDTPLHLAALYGHLEIVEVLLKNGADV 106
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           NA D  G T L +A   G+ EI  +LL  GA +N QD+ G +    ++  G+  + E L 
Sbjct: 107 NATDTYGFTPLHLAADAGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166
Query: 516 K 516
           K
Sbjct: 167 K 167

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L+ A + G    V  L+    DV+      KT ++ A  KG++ I+++LL    D+  A 
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAAD 77
Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK 618
           K GDTPL  A    +LE +++L+   A + A D  G T LH+A  A    IVEV ++   
Sbjct: 78  KMGDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGA 137
Query: 619 NNILLYRPNKAGETPYSIDMNNQKSILAQ 647
           +   +   +K G+T + I ++N    LA+
Sbjct: 138 D---VNAQDKFGKTAFDISIDNGNEDLAE 163

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/154 (41%), Positives = 90/154 (58%), Gaps = 1/154 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNA D   W+PL  AA  G+ ++   LL +GAD+ 
Sbjct: 15  GKKLLEAARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVN 74
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
             D  G +PL  A++ GH + V +LL   ADVNA  +  I+ L  AA RG+ EIV +L+K
Sbjct: 75  AYDTLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLK 134
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK 311
            GA VN  DK +G T    +   G+ ++ +IL K
Sbjct: 135 YGADVNAQDK-FGKTAFDISINNGNEDLAEILQK 167

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 84/152 (55%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L+ A R G  + V IL+  GA+V+ A +  WTPL +A      E+VE+LL+   +VNA D
Sbjct: 18  LLEAARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYD 77
Query: 460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYV 519
             G T L +A   G+ EI  +LL +GA +N +D +G + L  A   GH  IVE LLK   
Sbjct: 78  TLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGA 137
Query: 520 DVDIPGKERKTAVYTAVEKGNVPILKLLLTAN 551
           DV+   K  KTA   ++  GN  + ++L   N
Sbjct: 138 DVNAQDKFGKTAFDISINNGNEDLAEILQKLN 169

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 72/148 (48%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL A      + V +L+    +VNA D  G T L +A   G+ EI  +LL +GA +N  D
Sbjct: 18  LLEAARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYD 77
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP 552
             G + L  A   GH  IVE LLK   DV+       T ++ A  +G++ I+++LL    
Sbjct: 78  TLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGA 137
Query: 553 DLEIATKDGDTPLLKAVKTRNLEAIQML 580
           D+    K G T    ++   N +  ++L
Sbjct: 138 DVNAQDKFGKTAFDISINNGNEDLAEIL 165

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 72/145 (49%)
Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER 528
           A + G  +   +L+ +GA +N  D  G + L  A   GH  IVE LLK   DV+      
Sbjct: 21  AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT 588
            T ++ A   G++ I+++LL    D+     +G TPL  A    +LE +++L+   A + 
Sbjct: 81  STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 589 AVDKRGDTVLHIAMRARSKTIVEVF 613
           A DK G T   I++   ++ + E+ 
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEIL 165

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L+ A + G    V  L+    DV+       T ++ A   G++ I+++LL    D+    
Sbjct: 18  LLEAARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYD 77
Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK 618
             G TPL  A    +LE +++L+   A + A D  G T LH+A       IVEV ++   
Sbjct: 78  TLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGA 137
Query: 619 NNILLYRPNKAGETPYSIDMNNQKSILAQ 647
           +   +   +K G+T + I +NN    LA+
Sbjct: 138 D---VNAQDKFGKTAFDISINNGNEDLAE 163

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 88/154 (57%), Gaps = 1/154 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNAED   W+PL  AA  G+ ++   LL +GAD+ 
Sbjct: 15  GKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVN 74
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
             D  G +PL  A+  GH + V +LL   ADVNA+     + L  AA  G+ EIV +L+K
Sbjct: 75  AVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLK 134
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK 311
            GA VN  DK +G T    +   G+ ++ +IL K
Sbjct: 135 NGADVNAQDK-FGKTAFDISIDNGNEDLAEILQK 167

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 82/152 (53%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L+ A R G  + V IL+  GA+V+      WTPL +A      E+VE+LL+   +VNA+D
Sbjct: 18  LLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVD 77
Query: 460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYV 519
             G T L +A   G+ EI  +LL +GA +N  D  G + L  A   GH  IVE LLK   
Sbjct: 78  HAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGA 137
Query: 520 DVDIPGKERKTAVYTAVEKGNVPILKLLLTAN 551
           DV+   K  KTA   +++ GN  + ++L   N
Sbjct: 138 DVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 74/148 (50%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL A      + V +L+    +VNA D  G T L +A  +G+ EI  +LL +GA +N  D
Sbjct: 18  LLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVD 77
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP 552
            +G + L  A   GH  IVE LLK   DV+    E  T ++ A   G++ I+++LL    
Sbjct: 78  HAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGA 137
Query: 553 DLEIATKDGDTPLLKAVKTRNLEAIQML 580
           D+    K G T    ++   N +  ++L
Sbjct: 138 DVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 73/145 (50%)
Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER 528
           A + G  +   +L+ +GA +N +D SG + L  A   GH  IVE LLK   DV+      
Sbjct: 21  AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT 588
            T +  A   G++ I+++LL    D+     +G TPL  A    +LE +++L+   A + 
Sbjct: 81  MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 589 AVDKRGDTVLHIAMRARSKTIVEVF 613
           A DK G T   I++   ++ + E+ 
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L+ A + G    V  L+    DV+       T ++ A   G++ I+++LL    D+    
Sbjct: 18  LLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVD 77
Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK 618
             G TPL  A    +LE +++L+   A + A D  G T LH+A       IVEV ++N  
Sbjct: 78  HAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGA 137
Query: 619 NNILLYRPNKAGETPYSIDMNNQKSILAQ 647
           +   +   +K G+T + I ++N    LA+
Sbjct: 138 D---VNAQDKFGKTAFDISIDNGNEDLAE 163

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/126 (45%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
Query: 189 DNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNAD 248
           +  +PL  AAR G+ +V   LL+ GAD+  +D  G +PL  A+  GH + V LLL+  AD
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 249 VNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDI 308
           VNA      + L  AA  G+ E+V LL++ GA VN  DK  G TPL  A R GH+E+V +
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNGHLEVVKL 119
Query: 309 LLKAGA 314
           LL+AGA
Sbjct: 120 LLEAGA 125

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 53/121 (43%), Positives = 78/121 (64%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL  A R GH+E+V +LL+AGA+V+       TPL +A      EVV+LLLE   +V
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           NA DK+G T L +A ++G+ E+  LLL +GA +N +D++G + L  A + GH  +V+ LL
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 516 K 516
           +
Sbjct: 122 E 122

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 75/120 (62%)
Query: 431 TPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINI 490
           TPL +A      EVV+LLLE   +VNA DK+G T L +A ++G+ E+  LLL +GA +N 
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63
Query: 491 QDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTA 550
           +D++G + L  A + GH  +V+ LL+   DV+   K  +T ++ A   G++ ++KLLL A
Sbjct: 64  KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 76/125 (60%)
Query: 461 DGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVD 520
           +G T L +A ++G+ E+  LLL +GA +N +D++G + L  A + GH  +V+ LL+   D
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 521 VDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQML 580
           V+   K  +T ++ A   G++ ++KLLL A  D+    K+G TPL  A +  +LE +++L
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 120
Query: 581 IDKKA 585
           ++  A
Sbjct: 121 LEAGA 125

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 69/121 (57%)
Query: 494 SGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPD 553
           +G + L  A + GH  +V+ LL+   DV+   K  +T ++ A   G++ ++KLLL A  D
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 554 LEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVF 613
           +    K+G TPL  A +  +LE +++L++  A + A DK G T LH+A R     +V++ 
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 120
Query: 614 I 614
           +
Sbjct: 121 L 121

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 99.4 bits (246), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 62/154 (40%), Positives = 90/154 (58%), Gaps = 1/154 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNA D+  W+PL  AA  G+ ++   LL +GAD+ 
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVN 74
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
             D  G +PL  A+ +GH + V +LL   ADVNA+ +   + L  AA  G+ EIV +L+K
Sbjct: 75  ADDSLGVTPLHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLK 134
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK 311
            GA VN  DK +G T    +   G+ ++ +IL K
Sbjct: 135 HGADVNAQDK-FGKTAFDISIDNGNEDLAEILQK 167

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 83/152 (54%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L+ A R G  + V IL+  GA+V+ +    WTPL +A      E+VE+LL+   +VNA D
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADD 77
Query: 460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYV 519
             G T L +A   G+ E+  +LL +GA +N  D +G + L  A   GH  IVE LLK   
Sbjct: 78  SLGVTPLHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGA 137
Query: 520 DVDIPGKERKTAVYTAVEKGNVPILKLLLTAN 551
           DV+   K  KTA   +++ GN  + ++L   N
Sbjct: 138 DVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 74/145 (51%)
Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER 528
           A + G  +   +L+ +GA +N  D  G + L  A   GH  IVE LLK   DV+      
Sbjct: 21  AARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLG 80
Query: 529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT 588
            T ++ A ++G++ ++++LL    D+     +G TPL  A    +LE +++L+   A + 
Sbjct: 81  VTPLHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVN 140
Query: 589 AVDKRGDTVLHIAMRARSKTIVEVF 613
           A DK G T   I++   ++ + E+ 
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L+ A + G    V  L+    DV+       T ++ A   G++ I+++LL    D+    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADD 77
Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK 618
             G TPL  A    +LE +++L+   A + A D  G T LH+A       IVEV +++  
Sbjct: 78  SLGVTPLHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGA 137
Query: 619 NNILLYRPNKAGETPYSIDMNNQKSILAQ 647
           +   +   +K G+T + I ++N    LA+
Sbjct: 138 D---VNAQDKFGKTAFDISIDNGNEDLAE 163

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 87/152 (57%), Gaps = 1/152 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNAED    +PL  AAR G+ ++   LL +GAD+ 
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVN 74
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
             D  G +PL  A+ +GH + V +LL   ADVNA      + L  AA  G+ EIV +L+K
Sbjct: 75  ALDFSGSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLK 134
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDIL 309
            GA VN  DK +G T    +   G+ ++ +IL
Sbjct: 135 YGADVNAQDK-FGKTAFDISIDNGNEDLAEIL 165

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 71/121 (58%)
Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKP 453
           +YG TPL  A R GH+EIV++LLK GA+V+       TPL +A      E+VE+LL+Y  
Sbjct: 45  TYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAKRGHLEIVEVLLKYGA 104
Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEA 513
           +VNA D  G T L +A   G+ EI  +LL  GA +N QD+ G +    ++  G+  + E 
Sbjct: 105 DVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEI 164
Query: 514 L 514
           L
Sbjct: 165 L 165

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 77/145 (53%)
Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER 528
           A + G  +   +L+ +GA +N +D  GD+ L  A + GH  IVE LLK   DV+      
Sbjct: 21  AARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSG 80
Query: 529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT 588
            T ++ A ++G++ I+++LL    D+      G TPL  A  T +LE +++L+   A + 
Sbjct: 81  STPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVN 140
Query: 589 AVDKRGDTVLHIAMRARSKTIVEVF 613
           A DK G T   I++   ++ + E+ 
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L+ A + G    V  L+    DV+       T ++ A   G++ I+++LL    D+    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALD 77
Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK 618
             G TPL  A K  +LE +++L+   A + A D  G T LH+A       IVEV ++   
Sbjct: 78  FSGSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGA 137
Query: 619 NNILLYRPNKAGETPYSIDMNNQKSILAQ 647
           +   +   +K G+T + I ++N    LA+
Sbjct: 138 D---VNAQDKFGKTAFDISIDNGNEDLAE 163

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNA DN   +PL  AA  G+ ++   LL HGAD++
Sbjct: 15  GKKLLEAARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVD 74
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
             D+ G++PL  A+  GH + V +LL   ADVNA      + L  AA  G+ EIV +L+K
Sbjct: 75  AADVYGFTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLK 134
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEI 305
            GA VN  DK +G T    +   G+ ++
Sbjct: 135 YGADVNAQDK-FGKTAFDISIDNGNEDL 161

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/100 (48%), Positives = 66/100 (66%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL  A   GH+EIV++LLK GA+VD A +Y +TPL +A +    E+VE+LL+Y  +V
Sbjct: 47  GLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYGFTPLHLAAMTGHLEIVEVLLKYGADV 106
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSG 495
           NA D  G T L +A  +G+ EI  +LL  GA +N QD+ G
Sbjct: 107 NAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVNAQDKFG 146

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L+ A + G    V  L+    DV+       T ++ A   G++ I+++LL    D++ A 
Sbjct: 18  LLEAARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAAD 77
Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK 618
             G TPL  A  T +LE +++L+   A + A D  G T LH+A       IVEV ++   
Sbjct: 78  VYGFTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGA 137
Query: 619 NNILLYRPNKAGETPYSIDMNNQKSILAQEC 649
           +   +   +K G+T + I ++N    LA+ C
Sbjct: 138 D---VNAQDKFGKTAFDISIDNGNEDLAKSC 165

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 95.5 bits (236), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/154 (40%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNA D    +PL  AA  G+ ++   LL HGAD+ 
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVN 74
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
             D+ G +PL  A+  GH + V +LL   ADVNA   +  + L  AA  G+ EIV +L+K
Sbjct: 75  AIDIXGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLK 134
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK 311
            GA VN  DK +G T    +   G+ ++ +IL K
Sbjct: 135 HGADVNAQDK-FGKTAFDISIDNGNEDLAEILQK 167

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/153 (39%), Positives = 85/153 (55%), Gaps = 2/153 (1%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPL-LVATLGNFTEVVELLLEYKPNVNAL 458
           L+ A R G  + V IL+  GA+V+       TPL L AT G+  E+VE+LL++  +VNA+
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHL-EIVEVLLKHGADVNAI 76
Query: 459 DKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKY 518
           D  G T L +A   G+ EI  +LL  GA +N  D  GD+ L  A   GH  IVE LLK  
Sbjct: 77  DIXGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHG 136
Query: 519 VDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN 551
            DV+   K  KTA   +++ GN  + ++L   N
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 73/145 (50%)
Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER 528
           A + G  +   +L+ +GA +N  D SG + L  A   GH  IVE LLK   DV+      
Sbjct: 21  AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT 588
            T ++ A   G++ I+++LL    D+      GDTPL  A    +LE +++L+   A + 
Sbjct: 81  STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 589 AVDKRGDTVLHIAMRARSKTIVEVF 613
           A DK G T   I++   ++ + E+ 
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L+ A + G    V  L+    DV+       T ++ A   G++ I+++LL    D+    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAID 77
Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK 618
             G TPL  A    +LE +++L+   A + AVD  GDT LH+A       IVEV +++  
Sbjct: 78  IXGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGA 137
Query: 619 NNILLYRPNKAGETPYSIDMNNQKSILAQ 647
           +   +   +K G+T + I ++N    LA+
Sbjct: 138 D---VNAQDKFGKTAFDISIDNGNEDLAE 163

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/154 (40%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNA D    +PL  AA  G+ ++   LL HGAD+ 
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVN 74
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
             D+ G +PL  A+  GH + V +LL   ADVNA   +  + L  AA  G+ EIV +L+K
Sbjct: 75  AIDIMGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLK 134
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK 311
            GA VN  DK +G T    +   G+ ++ +IL K
Sbjct: 135 HGADVNAQDK-FGKTAFDISIDNGNEDLAEILQK 167

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/153 (39%), Positives = 85/153 (55%), Gaps = 2/153 (1%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPL-LVATLGNFTEVVELLLEYKPNVNAL 458
           L+ A R G  + V IL+  GA+V+       TPL L AT G+  E+VE+LL++  +VNA+
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHL-EIVEVLLKHGADVNAI 76
Query: 459 DKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKY 518
           D  G T L +A   G+ EI  +LL  GA +N  D  GD+ L  A   GH  IVE LLK  
Sbjct: 77  DIMGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHG 136
Query: 519 VDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN 551
            DV+   K  KTA   +++ GN  + ++L   N
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 73/145 (50%)
Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER 528
           A + G  +   +L+ +GA +N  D SG + L  A   GH  IVE LLK   DV+      
Sbjct: 21  AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT 588
            T ++ A   G++ I+++LL    D+      GDTPL  A    +LE +++L+   A + 
Sbjct: 81  STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 589 AVDKRGDTVLHIAMRARSKTIVEVF 613
           A DK G T   I++   ++ + E+ 
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L+ A + G    V  L+    DV+       T ++ A   G++ I+++LL    D+    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAID 77
Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK 618
             G TPL  A    +LE +++L+   A + AVD  GDT LH+A       IVEV +++  
Sbjct: 78  IMGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGA 137
Query: 619 NNILLYRPNKAGETPYSIDMNNQKSILAQ 647
           +   +   +K G+T + I ++N    LA+
Sbjct: 138 D---VNAQDKFGKTAFDISIDNGNEDLAE 163

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNA D    +PL      G+ ++   LL + AD+ 
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVN 74
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
             D  GW+PL  A+Y+GH + V +LL   ADVNA      + L  AA  G+ EIV +L+K
Sbjct: 75  ASDKSGWTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLK 134
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK 311
            GA VN  DK +G T    +   G+ ++ +IL K
Sbjct: 135 YGADVNAQDK-FGKTAFDISIDNGNEDLAEILQK 167

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 73/122 (59%)
Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           +G TPL      GH+EI+++LLK  A+V+ +    WTPL +A      E+VE+LL+Y  +
Sbjct: 46  FGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAYRGHLEIVEVLLKYGAD 105
Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           VNA+D  G T L +A +DG+ EI  +LL  GA +N QD+ G +    ++  G+  + E L
Sbjct: 106 VNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Query: 515 LK 516
            K
Sbjct: 166 QK 167

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 476 EIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTA 535
           E+ +L+ N GA +N  D  G + L   V  GH  I+E LLK   DV+   K   T ++ A
Sbjct: 29  EVRILMAN-GADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLA 87
Query: 536 VEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGD 595
             +G++ I+++LL    D+      G TPL  A +  +LE +++L+   A + A DK G 
Sbjct: 88  AYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGK 147
Query: 596 TVLHIAMRARSKTIVEVF 613
           T   I++   ++ + E+ 
Sbjct: 148 TAFDISIDNGNEDLAEIL 165

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA  G+   VR L+  GADVNA D++  +PL  AA  G  ++   LL +GAD+ 
Sbjct: 7   GKKLLEAAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVN 66
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
             D  G +PL  A+Y GH + V +LL   ADVNA+     + L  AA  G  EIV +L+K
Sbjct: 67  ASDSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLK 126
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDIL 309
            GA VN  D + G T    +  +G  ++ +IL
Sbjct: 127 HGADVNAQDAL-GLTAFDISINQGQEDLAEIL 157

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 66/119 (55%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL  A   G +EIV++LLK GA+V+ +     TPL +A      E+VE+LL++  +V
Sbjct: 39  GLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAYDGHLEIVEVLLKHGADV 98
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           NA D+ G T L +A   G  EI  +LL  GA +N QD  G +    ++  G   + E L
Sbjct: 99  NAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTAFDISINQGQEDLAEIL 157

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 63/122 (51%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL A      + V +L+    +VNA D +G T L +A  +G  EI  +LL +GA +N  D
Sbjct: 10  LLEAAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASD 69
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP 552
            +G + L  A   GH  IVE LLK   DV+   +   T ++ A   G + I+++LL    
Sbjct: 70  SAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGA 129
Query: 553 DL 554
           D+
Sbjct: 130 DV 131

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 476 EIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTA 535
           E+ +L+ N GA +N  D +G + L  A   G   IVE LLK   DV+       T ++ A
Sbjct: 21  EVRILMAN-GADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLA 79
Query: 536 VEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGD 595
              G++ I+++LL    D+    + G TPL  A  +  LE +++L+   A + A D  G 
Sbjct: 80  AYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGL 139
Query: 596 TVLHIAMRARSKTIVEVF 613
           T   I++    + + E+ 
Sbjct: 140 TAFDISINQGQEDLAEIL 157

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 85/168 (50%)
Query: 398 TPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNA 457
           T L WAC  GH EIV+ LL+ G  V+      W+PL +A      E+V+ LL    +VNA
Sbjct: 42  TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNA 101
Query: 458 LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKK 517
           ++++GCT L  A     +EIAV+LL  GA  + +D    + +  A   G+  +V  LL  
Sbjct: 102 VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFY 161
Query: 518 YVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPL 565
               +I   E  T ++ A ++  V   K L+T    + I  K+  TPL
Sbjct: 162 KASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPL 209

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 14/215 (6%)
Query: 429 CWTPLLVATL---GNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSG 485
           C + +++  L   G   E+ E +L  K      D+D  TAL  AC  G+ EI   LL  G
Sbjct: 4   CVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLG 63
Query: 486 AYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILK 545
             +N +D +G S L  A   G   IV+ALL K   V+   +   T ++ A  K    I  
Sbjct: 64  VPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAV 123
Query: 546 LLLT--ANPDLEIATKD--GDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIA 601
           +LL   ANPD     KD    T + +A    NL+ + +L+  KA     D  G+T LH+A
Sbjct: 124 MLLEGGANPD----AKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLA 179
Query: 602 MRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSI 636
                    +  +    +   +Y  NK  +TP  +
Sbjct: 180 CDEERVEEAKFLVTQGAS---IYIENKEEKTPLQV 211

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 85/168 (50%)
Query: 398 TPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNA 457
           T L WAC  GH EIV+ LL+ G  V+      W+PL +A      E+V+ LL    +VNA
Sbjct: 42  TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVKGAHVNA 101
Query: 458 LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKK 517
           ++++GCT L  A     +EIAV+LL  GA  + +D    + +  A   G+  +V  LL  
Sbjct: 102 VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFY 161
Query: 518 YVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPL 565
               +I   E  T ++ A ++  V   K L+T    + I  K+  TPL
Sbjct: 162 KASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPL 209

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 14/215 (6%)
Query: 429 CWTPLLVATL---GNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSG 485
           C + +++  L   G   E+ E +L  K      D+D  TAL  AC  G+ EI   LL  G
Sbjct: 4   CVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLG 63
Query: 486 AYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILK 545
             +N +D +G S L  A   G   IV+ALL K   V+   +   T ++ A  K    I  
Sbjct: 64  VPVNDKDDAGWSPLHIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAV 123
Query: 546 LLLT--ANPDLEIATKD--GDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIA 601
           +LL   ANPD     KD    T + +A    NL+ + +L+  KA     D  G+T LH+A
Sbjct: 124 MLLEGGANPD----AKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLA 179
Query: 602 MRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSI 636
                    +  +    +   +Y  NK  +TP  +
Sbjct: 180 CDEERVEEAKFLVTQGAS---IYIENKEEKTPLQV 211

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 85/168 (50%)
Query: 398 TPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNA 457
           T L WAC  GH EIV+ LL+ G  V+      W+PL +A      E+V+ LL     VNA
Sbjct: 43  TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNA 102
Query: 458 LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKK 517
           ++++GCT L  A     +EIAV+LL  GA  + +D    + +  A   G+  ++  LL  
Sbjct: 103 VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYY 162
Query: 518 YVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPL 565
               +I   E  T ++ A ++  V   KLL++    + I  K+  TPL
Sbjct: 163 KASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPL 210

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 96/215 (44%), Gaps = 14/215 (6%)
Query: 429 CWTPLLVATL---GNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSG 485
           C + L+V  L   G   E+ E +L  K      D+D  TAL  AC  G+ EI   LL  G
Sbjct: 5   CVSNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLG 64
Query: 486 AYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILK 545
             +N +D +G S L  A   G   IV+ALL K   V+   +   T ++ A  K    I  
Sbjct: 65  VPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAV 124
Query: 546 LLLT--ANPDLEIATKDG--DTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIA 601
           +LL   ANPD     KD    T + +A    NL+ I +L+  KA     D  G+T LH+A
Sbjct: 125 MLLEGGANPD----AKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLA 180
Query: 602 MRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSI 636
                    ++ +    +   +Y  NK  +TP  +
Sbjct: 181 CDEERVEEAKLLVSQGAS---IYIENKEEKTPLQV 212

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 85/168 (50%)
Query: 398 TPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNA 457
           T L WAC  GH EIV+ LL+ G  V+      W+PL +A      E+V+ LL     VNA
Sbjct: 42  TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNA 101
Query: 458 LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKK 517
           ++++GCT L  A     +EIAV+LL  GA  + +D    + +  A   G+  ++  LL  
Sbjct: 102 VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYY 161
Query: 518 YVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPL 565
               +I   E  T ++ A ++  V   KLL++    + I  K+  TPL
Sbjct: 162 KASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPL 209

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 96/215 (44%), Gaps = 14/215 (6%)
Query: 429 CWTPLLVATL---GNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSG 485
           C + L+V  L   G   E+ E +L  K      D+D  TAL  AC  G+ EI   LL  G
Sbjct: 4   CVSNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLG 63
Query: 486 AYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILK 545
             +N +D +G S L  A   G   IV+ALL K   V+   +   T ++ A  K    I  
Sbjct: 64  VPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAV 123
Query: 546 LLLT--ANPDLEIATKDG--DTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIA 601
           +LL   ANPD     KD    T + +A    NL+ I +L+  KA     D  G+T LH+A
Sbjct: 124 MLLEGGANPD----AKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLA 179
Query: 602 MRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSI 636
                    ++ +    +   +Y  NK  +TP  +
Sbjct: 180 CDEERVEEAKLLVSQGAS---IYIENKEEKTPLQV 211

>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 2/165 (1%)
Query: 159 TALMFAAQKGKLSFVRELVTRGADVNAEDND-NWSPLTYAAREGYTDVCAELLDHGADLE 217
           T L +AA   ++  V+  +++GA V+    D N +PL +A R+G+  +  +L+ +GAD  
Sbjct: 44  TLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPS 103
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYT-EIVALLV 276
             D  G S +  A+  GHT  VA L+ K  DV+      ++ L+WAA R ++ +   LL+
Sbjct: 104 LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLL 163
Query: 277 KKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGL 321
                VN+GDK +  T L WA   G+  ++ +LL+AGANVD   +
Sbjct: 164 TFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208

>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 3/190 (1%)
Query: 398 TPLVWACRKGHVEIVDILLKAGANVD-VAGLYCWTPLLVATLGNFTEVVELLLEYKPNVN 456
           T L WA     +++V   +  GA VD + G    TPL  AT      +V  L++Y  + +
Sbjct: 44  TLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPS 103
Query: 457 ALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLK 516
            +D +GC+ + +A + G+  I   L+  G  +++ D++G + L+ A    H      LL 
Sbjct: 104 LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLL 163
Query: 517 KY-VDVDIPGKERK-TAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
            + V V++  K  K TA++ AV  GN  ++ LLL A  +++     G++ L  A + +N+
Sbjct: 164 TFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNV 223
Query: 575 EAIQMLIDKK 584
             I  L + +
Sbjct: 224 WMINHLQEAR 233

>pdb|3HRA|A Chain A, Crystal Structure Of Ef0377 An Ankyrin Repeat Protein Length = 201

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 96/180 (53%), Gaps = 8/180 (4%)
Query: 139 LQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAA 198
           ++  L++     D+ D  G T L  A     +   + L+ RGAD+N +++ + SP  YA 
Sbjct: 21  VKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAG 80
Query: 199 REGYTDVCAELLDHGA-DLEHRDMGGWSPLMWASYKGHTDTVALLL-DKNADVNAHGNYH 256
            +G T++ A +L H   DL   +  G + L+ A+ KGH D V LLL D   D++   ++ 
Sbjct: 81  AQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFG 140
Query: 257 ISSLIWAAG-----RGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK 311
            ++LI A G     + Y +IV LL++ GA  ++ D   G T + +A +KG+ EI  IL +
Sbjct: 141 YTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNS-GRTAMDYANQKGYTEISKILAQ 199

>pdb|3HRA|A Chain A, Crystal Structure Of Ef0377 An Ankyrin Repeat Protein Length = 201

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 7/163 (4%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEY-KPN 454
           G TPL  A     +EI   L+  GA++++      +P L A     TE++  +L++  P+
Sbjct: 39  GNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPD 98
Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAY-INIQDRSGDSNLIHAV---KGG--HR 508
           +N  ++ G  AL  A + G+ +   LLL  G   I+ Q+  G + LI AV   +G   ++
Sbjct: 99  LNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQ 158
Query: 509 GIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN 551
            IV+ L++   D  I     +TA+  A +KG   I K+L   N
Sbjct: 159 DIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201

>pdb|3HRA|A Chain A, Crystal Structure Of Ef0377 An Ankyrin Repeat Protein Length = 201

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 88/180 (48%), Gaps = 7/180 (3%)
Query: 443 EVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHA 502
           +V E+L +    V+ +D +G T L IA  +   EIA  L++ GA IN+Q+   DS  ++A
Sbjct: 20  KVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYA 79
Query: 503 VKGGHRGIVEALLKKYV-DVDIPGKERKTAVYTAVEKGNVPILKLLLT-ANPDLEIATKD 560
              G   I+  +LK    D++   +    A+  A EKG++  +KLLL     D++     
Sbjct: 80  GAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDF 139
Query: 561 GDTPLLKAVKTRN-----LEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIR 615
           G T L++AV  R       + +++L++  A  +  D  G T +  A +     I ++  +
Sbjct: 140 GYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQ 199

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 129/289 (44%), Gaps = 23/289 (7%)
Query: 227 LMWASYKGHTDT-VALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVG 285
           L+ A+  G+ +  +ALL   N + +A      + L  AAG     IV LL++ GA V+  
Sbjct: 28  LLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAK 87
Query: 286 DKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGL---- 341
           DK  G  PL  AC  GH E+ ++LLK GA V+   LW + PL+ +A  +      L    
Sbjct: 88  DK-GGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSH 146
Query: 342 -ATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQG--------------VDPTFTFSSLL 386
            A P  V  + K     +   P+L+E +  +E +G              V  T     + 
Sbjct: 147 GADPTLVNCHGKSAVDMAP-TPELRERLT-YEFKGHSLLQAAREADLAKVKKTLALEIIN 204
Query: 387 FVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVE 446
           F             V +      ++ ++LL+ GANV+       TPL VA      +V+E
Sbjct: 205 FKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVME 264
Query: 447 LLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSG 495
           +L ++   +NALD  G TAL  A   G+ +   LLL+ G+  +I    G
Sbjct: 265 VLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQG 313

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 104/252 (41%), Gaps = 31/252 (12%)
Query: 395 YGTTPLVWACRKGHVE-IVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKP 453
           Y    L+ A R G+ E ++ +L     N   +     TPL +A   N   +V+LLL++  
Sbjct: 23  YKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGA 82
Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEA 513
           +V+A DK G   L  AC  G+YE+  LLL  GA +N  D    + L  A       +   
Sbjct: 83  DVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSL 142
Query: 514 LLKKYVD---VDIPGKERKTAVYTAVEKGNVPILKLLLT---ANPDLEIATKDGDTPLLK 567
           LL    D   V+  GK       +AV+    P L+  LT       L  A ++ D  L K
Sbjct: 143 LLSHGADPTLVNCHGK-------SAVDMAPTPELRERLTYEFKGHSLLQAAREAD--LAK 193
Query: 568 AVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIA---MRARSKTIVEVFIRNPKNNILLY 624
             KT  LE I              +  +T LH A   +  + K + E+ +R   N   + 
Sbjct: 194 VKKTLALEIINF---------KQPQSHETALHCAVASLHPKRKQVAELLLRKGAN---VN 241
Query: 625 RPNKAGETPYSI 636
             NK   TP  +
Sbjct: 242 EKNKDFMTPLHV 253

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 73/121 (60%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL  A + GH+EIV++LLK GA+V+    Y  TPL +A      E+VE+LL++  +V
Sbjct: 47  GHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAADNGHLEIVEVLLKHGADV 106
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           NA D +G T L +A  DG+ EI  +LL  GA +N QD+ G +    ++  G+  + E L 
Sbjct: 107 NAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166
Query: 516 K 516
           K
Sbjct: 167 K 167

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 72/148 (48%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL A      + V +L+    +VNA D  G T L +A K G+ EI  +LL  GA +N  D
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWD 77
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP 552
             G + L  A   GH  IVE LLK   DV+    E  T ++ A   G++ I+++LL    
Sbjct: 78  NYGATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGA 137
Query: 553 DLEIATKDGDTPLLKAVKTRNLEAIQML 580
           D+    K G T    ++   N +  ++L
Sbjct: 138 DVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 75/147 (51%)
Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER 528
           A + G  +   +L+ +GA +N  D  G + L  A K GH  IVE LLK   DV+      
Sbjct: 21  AARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYG 80
Query: 529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT 588
            T ++ A + G++ I+++LL    D+     +G TPL  A    +LE +++L+   A + 
Sbjct: 81  ATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVN 140
Query: 589 AVDKRGDTVLHIAMRARSKTIVEVFIR 615
           A DK G T   I++   ++ + E+  +
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L+ A + G    V  L+    DV+       T ++ A + G++ I+++LL    D+    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWD 77
Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK 618
             G TPL  A    +LE +++L+   A + A D  G T LH+A       IVEV ++   
Sbjct: 78  NYGATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGA 137
Query: 619 NNILLYRPNKAGETPYSIDMNNQKSILAQ 647
           +   +   +K G+T + I ++N    LA+
Sbjct: 138 D---VNAQDKFGKTAFDISIDNGNEDLAE 163

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 131/289 (45%), Gaps = 35/289 (12%)
Query: 161 LMFAAQKGKLSFVRELVTRGADVN-AEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHR 219
           L+ A Q   +  V++L+  GA+VN  E+   W+PL  A +    D+   LL HGAD   R
Sbjct: 9   LIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLR 68
Query: 220 DMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKG 279
              G +P + A+  G    + L L K ADVN    Y  ++ + AA  G  + +  L K+G
Sbjct: 69  KKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRG 128
Query: 280 AKVNVGDKVY---------GTTPLVWACRKGHVEIVDILL-KAGANV---DVAGLWAYM- 325
           A VN+  K           G T L+ A  KGHVE++ ILL + GA+V   D  G  A + 
Sbjct: 129 ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIH 188
Query: 326 PLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKH-------FERQGVDP 378
            L SS  +D+ +   L       +  +   GK+ L+  L  E KH        E++ ++ 
Sbjct: 189 ALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLI--LAVEKKHLGLVQRLLEQEHIEI 246
Query: 379 TFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGL 427
             T S            G T L+ A      +I ++L K GA+ D   L
Sbjct: 247 NDTDSD-----------GKTALLLAVELKLKKIAELLCKRGASTDCGDL 284

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 134/312 (42%), Gaps = 58/312 (18%)
Query: 294 LVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKW 353
           L+ A +   V++V  LL+ GANV+                    E G  TPL   +    
Sbjct: 9   LIKAVQNEDVDLVQQLLEGGANVNFQ-----------------EEEGGWTPLHNAVQMSR 51
Query: 354 GSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVD 413
                 LL           R G DP           V+    G TP + A   G V+++ 
Sbjct: 52  EDIVELLL-----------RHGADP-----------VLRKKNGATPFLLAAIAGSVKLLK 89
Query: 414 ILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVN----------ALDKDGC 463
           + L  GA+V+    Y +T  + A +    + ++ L +   NVN           L K G 
Sbjct: 90  LFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGA 149
Query: 464 TALTIACKDGYYEIAVLLLNS-GAYINIQDRSGDSNLIHAVKGGHRGIVEA----LLKKY 518
           TAL  A + G+ E+  +LL+  GA +N  D  G + LIHA+       VEA    LL   
Sbjct: 150 TALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG 209
Query: 519 VDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEI--ATKDGDTPLLKAVKTRNLEA 576
            DV++ G+  KT +  AVEK ++ +++ LL     +EI     DG T LL AV+ + L+ 
Sbjct: 210 ADVNVRGERGKTPLILAVEKKHLGLVQRLLE-QEHIEINDTDSDGKTALLLAVELK-LKK 267
Query: 577 IQMLIDKKAKIT 588
           I  L+ K+   T
Sbjct: 268 IAELLCKRGAST 279

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 50/266 (18%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYC-WTPLLVATLGNFTEVVELLLEYKPNVNAL 458
           L+ A +   V++V  LL+ GANV+       WTPL  A   +  ++VELLL +  +    
Sbjct: 9   LIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLR 68
Query: 459 DKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKY 518
            K+G T   +A   G  ++  L L+ GA +N  D  G +  + A   G    ++ L K+ 
Sbjct: 69  KKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRG 128
Query: 519 VDVDIPGKERK----------TAVYTAVEKGNVPILK----------------------- 545
            +V++  K ++          TA+  A EKG+V +LK                       
Sbjct: 129 ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIH 188
Query: 546 ---------------LLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK-AKITA 589
                          LLL    D+ +  + G TPL+ AV+ ++L  +Q L++++  +I  
Sbjct: 189 ALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIND 248
Query: 590 VDKRGDTVLHIAMRARSKTIVEVFIR 615
            D  G T L +A+  + K I E+  +
Sbjct: 249 TDSDGKTALLLAVELKLKKIAELLCK 274

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GAD NA D+   +PL  AA  G+ ++   LL +GAD+ 
Sbjct: 3   GKKLLEAARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVN 62
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
             D  G +PL  A+  GH + V +LL   ADVNA     I+ L  AA  G+ EIV +L+K
Sbjct: 63  AVDTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLK 122
Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDIL 309
            GA VN  DK +G T    +   G+ ++ +IL
Sbjct: 123 HGADVNAQDK-FGKTAFDISIDIGNEDLAEIL 153

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 81/148 (54%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L+ A R G  + V IL+  GA+ +    Y  TPL +A      E+VE+LL    +VNA+D
Sbjct: 6   LLEAARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVD 65
Query: 460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYV 519
            +G T L +A   G+ EI  +LL  GA +N +D +G + L  A   GH  IVE LLK   
Sbjct: 66  TNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGA 125
Query: 520 DVDIPGKERKTAVYTAVEKGNVPILKLL 547
           DV+   K  KTA   +++ GN  + ++L
Sbjct: 126 DVNAQDKFGKTAFDISIDIGNEDLAEIL 153

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 70/145 (48%)
Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER 528
           A + G  +   +L+ +GA  N  D  G + L  A   GH  IVE LL+   DV+      
Sbjct: 9   AARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNG 68
Query: 529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT 588
            T ++ A   G++ I+++LL    D+      G TPL  A    +LE +++L+   A + 
Sbjct: 69  TTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVN 128
Query: 589 AVDKRGDTVLHIAMRARSKTIVEVF 613
           A DK G T   I++   ++ + E+ 
Sbjct: 129 AQDKFGKTAFDISIDIGNEDLAEIL 153

>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 131/289 (45%), Gaps = 35/289 (12%)
Query: 161 LMFAAQKGKLSFVRELVTRGADVN-AEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHR 219
           L+ A Q   +  V++L+  GA+VN  E+   W+PL  A +    D+   LL HGAD   R
Sbjct: 29  LIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLR 88
Query: 220 DMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKG 279
              G +P + A+  G    + L L K ADVN    Y  ++ + AA  G  + +  L K+G
Sbjct: 89  KKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRG 148
Query: 280 AKVNVGDKVY---------GTTPLVWACRKGHVEIVDILL-KAGANV---DVAGLWAYM- 325
           A VN+  K           G T L+ A  KGHVE++ ILL + GA+V   D  G  A + 
Sbjct: 149 ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIH 208
Query: 326 PLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKH-------FERQGVDP 378
            L SS  +D+ +   L       +  +   GK+ L+  L  E KH        E++ ++ 
Sbjct: 209 ALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLI--LAVEKKHLGLVQRLLEQEHIEI 266
Query: 379 TFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGL 427
             T S            G T L+ A      +I ++L K GA+ D   L
Sbjct: 267 NDTDSD-----------GKTALLLAVELKLKKIAELLCKRGASTDCGDL 304

>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 147/338 (43%), Gaps = 45/338 (13%)
Query: 293 PLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAK 352
           P   + R+  VE   +L+KA  N DV        L   A  +   E G  TPL   +   
Sbjct: 13  PTSSSGRRAAVEDNHLLIKAVQNEDVD--LVQQLLEGGANVNFQEEEGGWTPLHNAVQMS 70
Query: 353 WGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIV 412
                  LL           R G DP           V+    G TP + A   G V+++
Sbjct: 71  REDIVELLL-----------RHGADP-----------VLRKKNGATPFILAAIAGSVKLL 108
Query: 413 DILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVN----------ALDKDG 462
            + L  GA+V+    Y +T  + A +    + ++ L +   NVN           L K G
Sbjct: 109 KLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGG 168
Query: 463 CTALTIACKDGYYEIAVLLLNS-GAYINIQDRSGDSNLIHAVKGGHRGIVEA----LLKK 517
            TAL  A + G+ E+  +LL+  GA +N  D  G + LIHA+       VEA    LL  
Sbjct: 169 ATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH 228
Query: 518 YVDVDIPGKERKTAVYTAVEKGNVPIL-KLLLTANPDLEIATKDGDTPLLKAVKTRNLEA 576
             DV++ G+  KT +  AVEK ++ ++ +LL   + ++     DG T LL AV+ + L+ 
Sbjct: 229 GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELK-LKK 287
Query: 577 IQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI 614
           I  L+ K+   T     GD V+  A R    ++V+V +
Sbjct: 288 IAELLCKRGASTDC---GDLVM-TARRNYDHSLVKVLL 321

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/92 (47%), Positives = 60/92 (65%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL  A R GH+E+V +LL+AGA+V+       TPL +A      EVV+LLLE   +V
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAY 487
           NA DK+G T L +A ++G+ E+  LLL +GAY
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 56/86 (65%)
Query: 431 TPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINI 490
           TPL +A      EVV+LLLE   +VNA DK+G T L +A ++G+ E+  LLL +GA +N 
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63
Query: 491 QDRSGDSNLIHAVKGGHRGIVEALLK 516
           +D++G + L  A + GH  +V+ LL+
Sbjct: 64  KDKNGRTPLHLAARNGHLEVVKLLLE 89

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 56/90 (62%)
Query: 461 DGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVD 520
           +G T L +A ++G+ E+  LLL +GA +N +D++G + L  A + GH  +V+ LL+   D
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 521 VDIPGKERKTAVYTAVEKGNVPILKLLLTA 550
           V+   K  +T ++ A   G++ ++KLLL A
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEA 90

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 51/86 (59%)
Query: 529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT 588
           +T ++ A   G++ ++KLLL A  D+    K+G TPL  A +  +LE +++L++  A + 
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 62
Query: 589 AVDKRGDTVLHIAMRARSKTIVEVFI 614
           A DK G T LH+A R     +V++ +
Sbjct: 63  AKDKNGRTPLHLAARNGHLEVVKLLL 88

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Query: 180 GADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTV 239
           G  VN    D  SPL  AA  G  D+   LL HGA+   R+     PL  A  +GH   V
Sbjct: 76  GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 240 ALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACR 299
             LLD NA  N       + LI+A   G+ E+VALL++ GA +N  +   G T L  A  
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNN-KGNTALHEAVI 194
Query: 300 KGHVEIVDILLKAGANVDV 318
           + HV +V++LL  GA+V V
Sbjct: 195 EKHVFVVELLLLHGASVQV 213

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 76/152 (50%), Gaps = 2/152 (1%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G++PL  A   G  +++ +LLK GAN          PL +A      +VV+ LL+     
Sbjct: 86  GSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKP 145
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           N  D  G T L  AC  G++E+  LLL  GA IN  +  G++ L  AV   H  +VE LL
Sbjct: 146 NKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLL 205
Query: 516 KKYVDVDIPGKERKTAVYTAVEKGNVPILKLL 547
                V +  K ++TAV  A  + N  I++LL
Sbjct: 206 LHGASVQVLNKRQRTAVDCA--EQNSKIMELL 235

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 11/192 (5%)
Query: 433 LLVATLGNFTEVVELLLEY--------KPNVNALDKDGCTALTIA--CKDGYYEIAVLLL 482
           LL A      E+V  LLE+        +  V+A D + C  L     C      +A +  
Sbjct: 15  LLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPA 74
Query: 483 NSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVP 542
            SG  +N+  + G S L  A   G   ++  LLK   +      ++   ++ A ++G+  
Sbjct: 75  -SGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQ 133
Query: 543 ILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAM 602
           ++K LL +N         G+TPL+ A    + E + +L+   A I A + +G+T LH A+
Sbjct: 134 VVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAV 193
Query: 603 RARSKTIVEVFI 614
             +   +VE+ +
Sbjct: 194 IEKHVFVVELLL 205

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 403 ACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDG 462
           AC  G  E V  LL+ GA+++ A +   T L  A + +  ++V+ L+E   N+N  D +G
Sbjct: 47  ACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEG 106
Query: 463 CTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNL-IHAVKGGHRGIVEALLKKYVDV 521
              L  A   GY +IA  L++ GA++   +  GD+ L I   +     +   + ++ VD+
Sbjct: 107 WIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDI 166
Query: 522 DIPGKERK--------------------------TAVYTAVEKGNVPILKLLLTANPDLE 555
           +   KE +                          TA++ A  KG   +LKLL+ A  D+ 
Sbjct: 167 EAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVN 226
Query: 556 IATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIA 601
           I   DG TPL  A      EA ++L++    + AV+K G T   +A
Sbjct: 227 IKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Query: 188 NDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNA 247
           +D    L  AAR G  D    L+ +GAD+   D  G +PL  A+  GH + V +LL   A
Sbjct: 12  SDLGKKLLEAARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGA 71
Query: 248 DVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVD 307
           DVNA  N+ I+ L  AA RG+ EIV +L+K GA VN  DK +G T    +   G+ ++ +
Sbjct: 72  DVNAEDNFGITPLHLAAIRGHLEIVEVLLKHGADVNAQDK-FGKTAFDISIDNGNEDLAE 130
Query: 308 ILLK 311
           IL K
Sbjct: 131 ILQK 134

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 56/86 (65%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL  A + GH+EIV++LLK GA+V+    +  TPL +A +    E+VE+LL++  +V
Sbjct: 47  GLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAIRGHLEIVEVLLKHGADV 106
Query: 456 NALDKDGCTALTIACKDGYYEIAVLL 481
           NA DK G TA  I+  +G  ++A +L
Sbjct: 107 NAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 64/119 (53%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL A      + V +L+    +VNALD+DG T L +A + G+ EI  +LL  GA +N +D
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAED 77
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN 551
             G + L  A   GH  IVE LLK   DV+   K  KTA   +++ GN  + ++L   N
Sbjct: 78  NFGITPLHLAAIRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 136

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 525 GKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK 584
           G +    +  A   G    +++L+    D+    +DG TPL  A +  +LE +++L+   
Sbjct: 11  GSDLGKKLLEAARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYG 70
Query: 585 AKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSI 644
           A + A D  G T LH+A       IVEV +++  +   +   +K G+T + I ++N    
Sbjct: 71  ADVNAEDNFGITPLHLAAIRGHLEIVEVLLKHGAD---VNAQDKFGKTAFDISIDNGNED 127
Query: 645 LAQ 647
           LA+
Sbjct: 128 LAE 130

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/87 (48%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPL-LVATLGNFTEVVELLLEYKPN 454
           G TPL  A ++GH+EIV++LLK GA+V+ + ++  TPL L AT+G+  E+VE+LLEY  +
Sbjct: 47  GVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAATVGHL-EIVEVLLEYGAD 105
Query: 455 VNALDKDGCTALTIACKDGYYEIAVLL 481
           VNA DK G TA  I+  +G  ++A +L
Sbjct: 106 VNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 62/119 (52%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL AT     + V +L+    +VNA+D  G T L +A K G+ EI  +LL  GA +N  D
Sbjct: 18  LLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASD 77
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN 551
             G + L  A   GH  IVE LL+   DV+   K  KTA   +++ GN  + ++L   N
Sbjct: 78  IWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 136

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 525 GKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK 584
           G +    +  A   G    +++L+    D+      G TPL  A K  +LE +++L+   
Sbjct: 11  GSDLGKKLLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHG 70
Query: 585 AKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSI 644
           A + A D  G T LH+A       IVEV +    +   +   +K G+T + I ++N    
Sbjct: 71  ADVNASDIWGRTPLHLAATVGHLEIVEVLLEYGAD---VNAQDKFGKTAFDISIDNGNED 127
Query: 645 LAQ 647
           LA+
Sbjct: 128 LAE 130

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPL-LVATLGNFTEVVELLLEYKPN 454
           G TPL  A ++GH+EIV++LLK GA+V+   ++  TPL L AT+G+  E+VE+LLEY  +
Sbjct: 47  GVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWGRTPLHLAATVGHL-EIVEVLLEYGAD 105
Query: 455 VNALDKDGCTALTIACKDGYYEIAVLL 481
           VNA DK G TA  I+  +G  ++A +L
Sbjct: 106 VNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 63/119 (52%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL AT     + V +L+    +VNA+D  G T L +A K G+ EI  +LL  GA +N +D
Sbjct: 18  LLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARD 77
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN 551
             G + L  A   GH  IVE LL+   DV+   K  KTA   +++ GN  + ++L   N
Sbjct: 78  IWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 136

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 525 GKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK 584
           G +    +  A   G    +++L+    D+      G TPL  A K  +LE +++L+   
Sbjct: 11  GSDLGKKLLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHG 70
Query: 585 AKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSI 644
           A + A D  G T LH+A       IVEV +    +   +   +K G+T + I ++N    
Sbjct: 71  ADVNARDIWGRTPLHLAATVGHLEIVEVLLEYGAD---VNAQDKFGKTAFDISIDNGNED 127
Query: 645 LAQ 647
           LA+
Sbjct: 128 LAE 130

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPL-LVATLGNFTEVVELLLEYKPN 454
           G TPL  A ++GH+EIV++LLK GA+V+ +  +  TPL L AT+G+  E+VE+LLEY  +
Sbjct: 47  GVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAATVGHL-EIVEVLLEYGAD 105
Query: 455 VNALDKDGCTALTIACKDGYYEIAVLL 481
           VNA DK G TA  I+  +G  ++A +L
Sbjct: 106 VNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 62/119 (52%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL AT     + V +L+    +VNA+D  G T L +A K G+ EI  +LL  GA +N  D
Sbjct: 18  LLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASD 77
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN 551
             G + L  A   GH  IVE LL+   DV+   K  KTA   +++ GN  + ++L   N
Sbjct: 78  SWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 136

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 525 GKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK 584
           G +    +  A   G    +++L+    D+      G TPL  A K  +LE +++L+   
Sbjct: 11  GSDLGKKLLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHG 70
Query: 585 AKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSI 644
           A + A D  G T LH+A       IVEV +    +   +   +K G+T + I ++N    
Sbjct: 71  ADVNASDSWGRTPLHLAATVGHLEIVEVLLEYGAD---VNAQDKFGKTAFDISIDNGNED 127
Query: 645 LAQ 647
           LA+
Sbjct: 128 LAE 130

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 11/175 (6%)
Query: 135 NLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPL 194
           NLD L+ +          RD    T LM A   G  + + +LV     +  +D +  + L
Sbjct: 23  NLDFLRNY----------RDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTAL 72
Query: 195 TYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGN 254
            +A +     +  +LL  G+++  +D  G +PLMW+   G+++    LL+  A+VN    
Sbjct: 73  IWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNL 132
Query: 255 YHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDIL 309
              + LI A+  G +EIV  L++ GA ++  D + G T    A   G  E++ I 
Sbjct: 133 EGETPLIVASKYGRSEIVKKLLELGADISARD-LTGLTAEASARIFGRQEVIKIF 186

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
Query: 184 NAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLL 243
           N  D+ N +PL  A   G  +   +L+++   LE +D+ G + L+WA           LL
Sbjct: 29  NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLL 88
Query: 244 DKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHV 303
            K ++VN       + L+W+   GY+E+   L++ GA VN    + G TPL+ A + G  
Sbjct: 89  SKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVN-DRNLEGETPLIVASKYGRS 147
Query: 304 EIVDILLKAGANV---DVAGLWA 323
           EIV  LL+ GA++   D+ GL A
Sbjct: 148 EIVKKLLELGADISARDLTGLTA 170

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 72/154 (46%)
Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKP 453
           SY  TPL+ AC  G    +D L++    ++   +   T L+ A   N   + E LL    
Sbjct: 33  SYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGS 92
Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEA 513
           NVN  D  G T L  +   GY E++  LL  GA +N ++  G++ LI A K G   IV+ 
Sbjct: 93  NVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKK 152
Query: 514 LLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLL 547
           LL+   D+        TA  +A   G   ++K+ 
Sbjct: 153 LLELGADISARDLTGLTAEASARIFGRQEVIKIF 186

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 70/158 (44%)
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           N  D    T L +AC  G       L+ +   +  +D  G + LI AVK    GI E LL
Sbjct: 29  NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLL 88
Query: 516 KKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLE 575
            K  +V+      KT +  ++  G   +   LL    ++     +G+TPL+ A K    E
Sbjct: 89  SKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSE 148
Query: 576 AIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVF 613
            ++ L++  A I+A D  G T    A     + ++++F
Sbjct: 149 IVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIF 186

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Query: 198 AREGYTDVCAELLDHGADLEHR-DMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYH 256
           A +G  D   E L  G +L ++ D  G++PL+WAS  G  +TV  LL+  AD +      
Sbjct: 10  AAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKER 69
Query: 257 ISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANV 316
            S+L  A+  GYT+IV LL+++   +N+ D   G TPL++A R  HV+ V+ LL  GA++
Sbjct: 70  ESALSLASTGGYTDIVGLLLERDVDINIYD-WNGGTPLLYAVRGNHVKCVEALLARGADL 128
Query: 317 DVAGLWAYMPL 327
                  Y P+
Sbjct: 129 TTEADSGYTPM 139

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 63/119 (52%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL+WA   G +E V  LL+ GA+  +      + L +A+ G +T++V LLLE   ++
Sbjct: 36  GFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDI 95
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           N  D +G T L  A +  + +    LL  GA +  +  SG + +  AV  G+R + + +
Sbjct: 96  NIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVI 154

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 488 INIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLL 547
           +N  D  G + LI A   G    V  LL+   D  I  KER++A+  A   G   I+ LL
Sbjct: 29  VNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLL 88
Query: 548 LTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSK 607
           L  + D+ I   +G TPLL AV+  +++ ++ L+ + A +T     G T + +A+    +
Sbjct: 89  LERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYR 148
Query: 608 TIVEVFIRNPKNNIL-LYRPNKAGETP 633
            + +V     +N+IL L++ N     P
Sbjct: 149 KVQQVI----ENHILKLFQSNLVPADP 171

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 66/120 (55%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNA+D    +PL  A   G+ ++   LL +GAD+ 
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVN 74
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
             D  G++PL  A++ GH +   +LL   ADVNA   +  ++   + G G  ++  +L K
Sbjct: 75  AVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 66/117 (56%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L+ A R G  + V IL+  GA+V+    Y  TPL +AT     E+VE+LL+   +VNA+D
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVD 77
Query: 460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLK 516
             G T L +A   G+ EIA +LL  GA +N QD+ G +    ++  G+  + E L K
Sbjct: 78  AIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 59/119 (49%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL A      + V +L+    +VNA D+ G T L +A   G+ EI  +LL +GA +N  D
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVD 77
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN 551
             G + L  A   GH  I E LLK   DV+   K  KTA   ++  GN  + ++L   N
Sbjct: 78  AIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 525 GKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK 584
           G +    +  A   G    +++L+    D+    + G TPL  A    +LE +++L+   
Sbjct: 11  GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNG 70
Query: 585 AKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSI 644
           A + AVD  G T LH+A       I EV +++  +   +   +K G+T + I + N    
Sbjct: 71  ADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGAD---VNAQDKFGKTAFDISIGNGNED 127
Query: 645 LAQ 647
           LA+
Sbjct: 128 LAE 130

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Query: 126 TLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNA 185
           ++    A+  +  L T +E +  V +  D+ G T LM+AA  G+++ V  L+  GAD   
Sbjct: 6   SVHQLAAQGEMLYLATRIE-QENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL 64
Query: 186 EDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDK 245
                 S L+ A  +GYTD+   LLD G D+   D  G +PL++A +  H   V +LL+ 
Sbjct: 65  LGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLES 124
Query: 246 NADVNAHGNYHISSLIWAAGRGYTEI 271
            AD     +   +S+  A   GY  +
Sbjct: 125 GADPTIETDSGYNSMDLAVALGYRSV 150

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
           + H D  G++PLMWA+  G    V  LL   AD    G    S+L  A  +GYT+IV +L
Sbjct: 29  INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKML 88
Query: 276 VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGAN 315
           +  G  VN  D   G TPL++A    HV+ V +LL++GA+
Sbjct: 89  LDCGVDVNEYDW-NGGTPLLYAVHGNHVKCVKMLLESGAD 127

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL+WA   G + +V+ LL+ GA+  + G    + L +A    +T++V++LL+   +V
Sbjct: 36  GFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDV 95
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           N  D +G T L  A    + +   +LL SGA   I+  SG +++  AV  G+R + + +
Sbjct: 96  NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVI 154

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 64/126 (50%)
Query: 488 INIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLL 547
           IN  D  G + L+ A   G   +VE LL+   D  + GK R++A+  A  KG   I+K+L
Sbjct: 29  INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKML 88
Query: 548 LTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSK 607
           L    D+     +G TPLL AV   +++ ++ML++  A  T     G   + +A+    +
Sbjct: 89  LDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYR 148
Query: 608 TIVEVF 613
           ++ +V 
Sbjct: 149 SVQQVI 154

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Query: 126 TLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNA 185
           ++    A+  +  L T +E +  V +  D+ G T LM+AA  G+++ V  L+  GAD   
Sbjct: 4   SVHQLAAQGEMLYLATRIE-QENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL 62
Query: 186 EDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDK 245
                 S L+ A  +GYTD+   LLD G D+   D  G +PL++A +  H   V +LL+ 
Sbjct: 63  LGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLES 122
Query: 246 NADVNAHGNYHISSLIWAAGRGYTEI 271
            AD     +   +S+  A   GY  +
Sbjct: 123 GADPTIETDSGYNSMDLAVALGYRSV 148

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
           + H D  G++PLMWA+  G    V  LL   AD    G    S+L  A  +GYT+IV +L
Sbjct: 27  INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKML 86
Query: 276 VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGAN 315
           +  G  VN  D   G TPL++A    HV+ V +LL++GA+
Sbjct: 87  LDCGVDVNEYDW-NGGTPLLYAVHGNHVKCVKMLLESGAD 125

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL+WA   G + +V+ LL+ GA+  + G    + L +A    +T++V++LL+   +V
Sbjct: 34  GFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDV 93
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           N  D +G T L  A    + +   +LL SGA   I+  SG +++  AV  G+R + + +
Sbjct: 94  NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVI 152

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 64/126 (50%)
Query: 488 INIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLL 547
           IN  D  G + L+ A   G   +VE LL+   D  + GK R++A+  A  KG   I+K+L
Sbjct: 27  INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKML 86
Query: 548 LTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSK 607
           L    D+     +G TPLL AV   +++ ++ML++  A  T     G   + +A+    +
Sbjct: 87  LDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYR 146
Query: 608 TIVEVF 613
           ++ +V 
Sbjct: 147 SVQQVI 152

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 132 AEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNW 191
           A+  +  L T +E +  V +  D+ G T LM+AA  G+++ V  L+  GAD         
Sbjct: 28  AQGEMLYLATRIE-QENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRE 86
Query: 192 SPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNA 251
           S L+ A  +GYTD+   LLD G D+   D  G +PL++A +  H   V +LL+  AD   
Sbjct: 87  SALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTI 146
Query: 252 HGNYHISSLIWAAGRGYTEI 271
             +   +S+  A   GY  +
Sbjct: 147 ETDSGYNSMDLAVALGYRSV 166

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
           + H D  G++PLMWA+  G    V  LL   AD    G    S+L  A  +GYT+IV +L
Sbjct: 45  INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKML 104
Query: 276 VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGAN 315
           +  G  VN  D   G TPL++A    HV+ V +LL++GA+
Sbjct: 105 LDCGVDVNEYDW-NGGTPLLYAVHGNHVKCVKMLLESGAD 143

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL+WA   G + +V+ LL+ GA+  + G    + L +A    +T++V++LL+   +V
Sbjct: 52  GFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDV 111
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           N  D +G T L  A    + +   +LL SGA   I+  SG +++  AV  G+R + + +
Sbjct: 112 NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVI 170

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 64/126 (50%)
Query: 488 INIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLL 547
           IN  D  G + L+ A   G   +VE LL+   D  + GK R++A+  A  KG   I+K+L
Sbjct: 45  INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKML 104
Query: 548 LTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSK 607
           L    D+     +G TPLL AV   +++ ++ML++  A  T     G   + +A+    +
Sbjct: 105 LDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYR 164
Query: 608 TIVEVF 613
           ++ +V 
Sbjct: 165 SVQQVI 170

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 56/87 (64%)
Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           +G TPL  A   GH+EIV++LLK GA+V+  G    TPL +A   +  E+VE+LL++  +
Sbjct: 46  WGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTGRTPLHLAAWADHLEIVEVLLKHGAD 105
Query: 455 VNALDKDGCTALTIACKDGYYEIAVLL 481
           VNA DK G TA  I+  +G  ++A +L
Sbjct: 106 VNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 57/115 (49%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL A      + V +L     +VNA D  G T L +A   G+ EI  +LL +GA +N   
Sbjct: 18  LLEAARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATG 77
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLL 547
            +G + L  A    H  IVE LLK   DV+   K  KTA   +++ GN  + ++L
Sbjct: 78  NTGRTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 547 LLTAN-PDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRAR 605
           +LTAN  D+      G TPL  A    +LE +++L+   A + A    G T LH+A  A 
Sbjct: 32  ILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTGRTPLHLAAWAD 91
Query: 606 SKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQ 647
              IVEV +++  +   +   +K G+T + I ++N    LA+
Sbjct: 92  HLEIVEVLLKHGAD---VNAQDKFGKTAFDISIDNGNEDLAE 130

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 2/131 (1%)
Query: 198 AREGYTDVCAELLDHGADLEHR-DMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYH 256
           A +G  D   E L  G +L ++ D  G++PL+WAS  G  +TV  LL+  AD +      
Sbjct: 10  AAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKER 69
Query: 257 ISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANV 316
            S+L  A+  GYT+IV LL+++   +N+ D   G TPL++A    HV+ V+ LL  GA++
Sbjct: 70  ESALSLASTGGYTDIVGLLLERDVDINIYD-WNGGTPLLYAVHGNHVKCVEALLARGADL 128
Query: 317 DVAGLWAYMPL 327
                  Y P+
Sbjct: 129 TTEADSGYTPM 139

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 58/110 (52%)
Query: 430 WTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYIN 489
           +TPL+ A+     E V  LLE+  + + L K+  +AL++A   GY +I  LLL     IN
Sbjct: 37  FTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDIN 96
Query: 490 IQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKG 539
           I D +G + L++AV G H   VEALL +  D+        T +  AV  G
Sbjct: 97  IYDWNGGTPLLYAVHGNHVKCVEALLARGADLTTEADSGYTPMDLAVALG 146

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 488 INIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLL 547
           +N  D  G + LI A   G    V  LL+   D  I  KER++A+  A   G   I+ LL
Sbjct: 29  VNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLL 88
Query: 548 LTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSK 607
           L  + D+ I   +G TPLL AV   +++ ++ L+ + A +T     G T + +A+    +
Sbjct: 89  LERDVDINIYDWNGGTPLLYAVHGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYR 148
Query: 608 TIVEVFIRNPKNNIL-LYRPNKAGETP 633
            + +V     +N+IL L++ N     P
Sbjct: 149 KVQQVI----ENHILKLFQSNLVPADP 171

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 63/120 (52%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNA D    +PL  AA   + ++   LL HGAD+ 
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVN 74
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
             D  G +PL  A+  GH + V +LL   ADVNA   +  ++   +   G  ++  +L K
Sbjct: 75  AHDNDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 194 LTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHG 253
           L  AAR G  D    L+ +GAD+   D  G +PL  A+   H + V +LL   ADVNAH 
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHD 77
Query: 254 NYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK 311
           N   + L  AA  G+ EIV +L+K GA VN  DK +G T    +   G+ ++ +IL K
Sbjct: 78  NDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDK-FGKTAFDISIDNGNEDLAEILQK 134

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 65/117 (55%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L+ A R G  + V IL+  GA+V+       TPL +A   +  E+VE+LL++  +VNA D
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHD 77
Query: 460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLK 516
            DG T L +A   G+ EI  +LL  GA +N QD+ G +    ++  G+  + E L K
Sbjct: 78  NDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 59/119 (49%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL A      + V +L+    +VNA D+ G T L +A    + EI  +LL  GA +N  D
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHD 77
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN 551
             G + L  A   GH  IVE LLK   DV+   K  KTA   +++ GN  + ++L   N
Sbjct: 78  NDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 136

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 58/117 (49%)
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L+ A + G    V  L+    DV+   ++  T ++ A +  ++ I+++LL    D+    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHD 77
Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIR 615
            DG TPL  A    +LE +++L+   A + A DK G T   I++   ++ + E+  +
Sbjct: 78  NDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 63/102 (61%)
Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           +G +PL WACR+G   +V++L+  GA ++V      TPL +A      ++V+ LL+YK +
Sbjct: 38  HGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKAD 97
Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGD 496
           +NA+++ G   L  AC  G  ++A  L+ +GA ++I ++ G+
Sbjct: 98  INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGE 139

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 62/130 (47%)
Query: 439 GNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSN 498
           GN   V   L   + ++N  D  G + L  AC++G   +  +L+  GA IN+ +R  D+ 
Sbjct: 16  GNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTP 75
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L  A   GHR IV+ LL+   D++   +     ++ A   G   + + L+     + I  
Sbjct: 76  LHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICN 135
Query: 559 KDGDTPLLKA 568
           K G+ P+ KA
Sbjct: 136 KYGEMPVDKA 145

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 530 TAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITA 589
           + ++ A  +G   ++++L+     + +  +  DTPL  A    + + +Q L+  KA I A
Sbjct: 41  SPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINA 100
Query: 590 VDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP 633
           V++ G+  LH A       + E  +    N  L+   NK GE P
Sbjct: 101 VNEHGNVPLHYACFWGQDQVAEDLV---ANGALVSICNKYGEMP 141

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 63/102 (61%)
Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           +G +PL WACR+G   +V++L+  GA ++V      TPL +A      ++V+ LL+YK +
Sbjct: 33  HGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKAD 92
Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGD 496
           +NA+++ G   L  AC  G  ++A  L+ +GA ++I ++ G+
Sbjct: 93  INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGE 134

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 62/130 (47%)
Query: 439 GNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSN 498
           GN   V   L   + ++N  D  G + L  AC++G   +  +L+  GA IN+ +R  D+ 
Sbjct: 11  GNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTP 70
Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
           L  A   GHR IV+ LL+   D++   +     ++ A   G   + + L+     + I  
Sbjct: 71  LHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICN 130
Query: 559 KDGDTPLLKA 568
           K G+ P+ KA
Sbjct: 131 KYGEMPVDKA 140

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 530 TAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITA 589
           + ++ A  +G   ++++L+     + +  +  DTPL  A    + + +Q L+  KA I A
Sbjct: 36  SPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINA 95
Query: 590 VDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP 633
           V++ G+  LH A       + E  +    N  L+   NK GE P
Sbjct: 96  VNEHGNVPLHYACFWGQDQVAEDLV---ANGALVSICNKYGEMP 136

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 53/96 (55%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL  A + GH E V  LL  GA+V+       TPL +A      E+V+LLL    +V
Sbjct: 9   GNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV 68
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQ 491
           NA  KDG T   +A K+G++EI  LL   GA +N +
Sbjct: 69  NARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNAR 104

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 50/92 (54%)
Query: 431 TPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINI 490
           TPL  A      E V+ LL    +VNA  KDG T L +A K+G+ EI  LLL  GA +N 
Sbjct: 11  TPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA 70
Query: 491 QDRSGDSNLIHAVKGGHRGIVEALLKKYVDVD 522
           + + G++    A K GH  IV+ L  K  DV+
Sbjct: 71  RSKDGNTPEHLAKKNGHHEIVKLLDAKGADVN 102

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 54/97 (55%)
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP 552
           + G++ L +A K GH   V+ LL K  DV+   K+  T ++ A + G+  I+KLLL    
Sbjct: 7   KDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA 66
Query: 553 DLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITA 589
           D+   +KDG+TP   A K  + E +++L  K A + A
Sbjct: 67  DVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNA 103

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 557 ATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI 614
            +KDG+TPL  A K  + E ++ L+ K A + A  K G+T LH+A +     IV++ +
Sbjct: 5   GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLL 62

>pdb|1IKN|D Chain D, IkappabalphaNF-Kappab Complex Length = 236

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 146 KRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDV 205
           K+ + +D D     A++   +   +  +R++    A +N ++N   +PL  A      ++
Sbjct: 1   KQQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEI 60
Query: 206 CAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLD-----------KNADVNAHGN 254
              LL  G D E RD  G +PL  A  +G   +V +L             K  + N H  
Sbjct: 61  AEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTC 120
Query: 255 YHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGA 314
            H++S+      GY  IV LLV  GA VN  +   G T L  A    + ++V +LLK GA
Sbjct: 121 LHLASI-----HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA 175
Query: 315 NVDVAGLWAYMP 326
           +V+      Y P
Sbjct: 176 DVNRVTYQGYSP 187

>pdb|1IKN|D Chain D, IkappabalphaNF-Kappab Complex Length = 236

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 20/173 (11%)
Query: 431 TPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINI 490
           TPL +A + N  E+ E LL    +    D  G T L +AC+ G      +L  S    ++
Sbjct: 47  TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL 106
Query: 491 Q------DRSGDSNLIHAVKGGHRGIVEALLKKYVDVDI--PGKERKTAVYTAVEKGNVP 542
                  + +G + L  A   G+ GIVE L+    DV+   P   R TA++ AV+  N  
Sbjct: 107 HSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGR-TALHLAVDLQNPD 165
Query: 543 ILKLLLTANPDLEIATKDGDTP-----------LLKAVKTRNLEAIQMLIDKK 584
           ++ LLL    D+   T  G +P           + + +    LE +QML + +
Sbjct: 166 LVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESE 218

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 63/120 (52%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNAED    +PL  AA   + ++   LL +GAD+ 
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVN 74
Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
             D  G +PL   +  GH + V +LL   ADVNA   +  ++   +   G  ++  +L K
Sbjct: 75  AIDAIGETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 64/117 (54%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L+ A R G  + V IL+  GA+V+       TPL +A + +  E+VE+LL+   +VNA+D
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAID 77
Query: 460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLK 516
             G T L +    G+ EI  +LL  GA +N QD+ G +    ++  G+  + E L K
Sbjct: 78  AIGETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 61/119 (51%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL A      + V +L+    +VNA DK G T L +A  + + EI  +LL +GA +N  D
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAID 77
Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN 551
             G++ L      GH  IVE LLK   DV+   K  KTA   +++ GN  + ++L   N
Sbjct: 78  AIGETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 136

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 525 GKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK 584
           G +    +  A   G    +++L+    D+    K G TPL  A    +LE +++L+   
Sbjct: 11  GSDLGKKLLEAARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNG 70
Query: 585 AKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSI 644
           A + A+D  G+T LH+        IVEV +++  +   +   +K G+T + I ++N    
Sbjct: 71  ADVNAIDAIGETPLHLVAMYGHLEIVEVLLKHGAD---VNAQDKFGKTAFDISIDNGNED 127
Query: 645 LAQ 647
           LA+
Sbjct: 128 LAE 130

>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family Length = 241

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 42/225 (18%)
Query: 396 GTTPLVWACRKGHV----EIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEY 451
           G TPL  A  +G++     +V++  + G  +D+      TPL +A +     VV LL+  
Sbjct: 9   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 68
Query: 452 KPNVNALDKDGCTALTIACK--------------------------DGYYEIAV------ 479
             +  ALD+ G TA  +AC+                          DG   + V      
Sbjct: 69  GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC 128
Query: 480 -----LLLNSGAYINIQD-RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVY 533
                LLL  GA I+  D +SG S LIHAV+     +V+ LL+   +V+       +A++
Sbjct: 129 QETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALH 188
Query: 534 TAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQ 578
           +A  +G +P+++ L+ +  D  +     DTPL+ A   R ++ ++
Sbjct: 189 SASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 233

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNW---SPLTYAAREGYTDVCAELLDHGA 214
           G  L+ AA+ G+   VR L+  GA        +W   SPL  AA+ G+      LL  G 
Sbjct: 3   GKKLLEAARAGQDDEVRILMANGAPFTT----DWLGTSPLHLAAQYGHFSTTEVLLRAGV 58
Query: 215 DLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVAL 274
             + R     +PL  A+ +GH + V +LL   ADVNA     +++L WA    + E+V L
Sbjct: 59  SRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVEL 118
Query: 275 LVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDIL 309
           L+K GA V+   K +  T    +   G+ ++ +IL
Sbjct: 119 LIKYGADVHTQSK-FCKTAFDISIDNGNEDLAEIL 152

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 61/119 (51%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           GT+PL  A + GH    ++LL+AG + D       TPL +A       +VE+LL++  +V
Sbjct: 34  GTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADV 93
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           NA D    TAL  A +  + E+  LL+  GA ++ Q +   +    ++  G+  + E L
Sbjct: 94  NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 49/98 (50%)
Query: 462 GCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDV 521
           G + L +A + G++    +LL +G   + + +   + L  A   GH  IVE LLK   DV
Sbjct: 34  GTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADV 93
Query: 522 DIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATK 559
           +     + TA++ A E  +  +++LL+    D+   +K
Sbjct: 94  NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSK 131

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 161 LMFAAQKGKLSFVRELVTRGADVNAEDND--NWSPLTYAAREGYTDVCAELLDHGADLEH 218
           L+ AA+ G +  V++L T  + VN  D +    +PL +AA      V   LL HGAD+  
Sbjct: 16  LLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA 74
Query: 219 RDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKK 278
           +D GG  PL  A   GH +   LL+   A VN    +  + L  AA +G  EI  LL++ 
Sbjct: 75  KDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQH 134
Query: 279 GAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVA 319
           GA     ++  G TPL    + G  +I D+L    A +D A
Sbjct: 135 GADPTKKNR-DGNTPLDLV-KDGDTDIQDLLRGDAALLDAA 173

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 79/181 (43%), Gaps = 40/181 (22%)
Query: 391 MHLSYGTTP----LVWACRKGHVEIVDIL--LKAGANVDVAGLYCWTPLLVATLGNFTEV 444
           M +S G +     L+ A + G VE V  L  +++    D+ G    TPL  A   N   V
Sbjct: 3   MGISLGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQS-TPLHFAAGYNRVSV 61
Query: 445 VELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVK 504
           VE LL++  +V+A DK G   L  AC  G+YE+A LL+  GA +N+ D            
Sbjct: 62  VEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD------------ 109
Query: 505 GGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTP 564
                     L K+           T ++ A  KG   I KLLL    D     +DG+TP
Sbjct: 110 ----------LWKF-----------TPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTP 148
Query: 565 L 565
           L
Sbjct: 149 L 149

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 4/198 (2%)
Query: 398 TPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNA 457
           +P+  A   GH   +  L+  G  V++      +PL  A LG     V++LL++   VN 
Sbjct: 61  SPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNG 120
Query: 458 LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIH-AVKGGHRGIVEALLK 516
           +  D  T L  AC  G ++   LLL  GA  ++Q  S  ++ IH A + GH   V +L+ 
Sbjct: 121 VTADWHTPLFNACVSGSWDCVNLLLQHGA--SVQPESDLASPIHEAARRGHVECVNSLIA 178
Query: 517 KYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEA 576
              ++D       T +Y A E      +K LL +  D+    K  D+PL   V+T + E 
Sbjct: 179 YGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVVRTASEEL 237
Query: 577 IQMLIDKKAKITAVDKRG 594
             +L+D  A   A +  G
Sbjct: 238 ACLLMDFGADTQAKNAEG 255

>pdb|1NFI|E Chain E, I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 16/189 (8%)
Query: 149 VADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAE 208
           + +D D     A++   +   +  +R++    A +N ++N   +PL  A      ++   
Sbjct: 1   LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEA 60
Query: 209 LLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLD-----------KNADVNAHGNYHI 257
           LL  G D E RD  G +PL  A  +G   +V +L             K  + N H   H+
Sbjct: 61  LLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHL 120
Query: 258 SSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
           +S+      GY  IV LLV  GA VN  +   G T L  A    + ++V +LLK GA+V+
Sbjct: 121 ASI-----HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN 175
Query: 318 VAGLWAYMP 326
                 Y P
Sbjct: 176 RVTYQGYSP 184

>pdb|1NFI|E Chain E, I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 431 TPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNS------ 484
           TPL +A + N  E+ E LL    +    D  G T L +AC+ G      +L  S      
Sbjct: 44  TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL 103
Query: 485 GAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDI--PGKERKTAVYTAVEKGNVP 542
            + +   + +G + L  A   G+ GIVE L+    DV+   P   R TA++ AV+  N  
Sbjct: 104 HSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGR-TALHLAVDLQNPD 162
Query: 543 ILKLLLTANPDLEIATKDGDTP 564
           ++ LLL    D+   T  G +P
Sbjct: 163 LVSLLLKCGADVNRVTYQGYSP 184

>pdb|1YYH|A Chain A, Crystal Structure Of The Human Notch 1 Ankyrin Domain Length = 253

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 6/213 (2%)
Query: 119 MVSLC----YRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVR 174
           M++ C      T  S   ED    +  F+    ++ +  D  G TAL  AA+  +    +
Sbjct: 15  MIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAK 74
Query: 175 ELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL-DHGADLEHRDMGGWSPLMWASYK 233
            L+   AD N +DN   +PL  A       V   L+ +   DL+ R   G +PL+ A+  
Sbjct: 75  RLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARL 134
Query: 234 GHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTP 293
                +  L++ +ADVNA  +   S+L WAA     +   +L+K GA  ++ +     TP
Sbjct: 135 AVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN-REETP 193
Query: 294 LVWACRKGHVEIVDILLKAGANVDVAGLWAYMP 326
           L  A R+G  E   +LL   AN D+      +P
Sbjct: 194 LFLAAREGSYETAKVLLDHFANRDITDHMDRLP 226

>pdb|1YYH|A Chain A, Crystal Structure Of The Human Notch 1 Ankyrin Domain Length = 253

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 49/227 (21%)
Query: 421 NVDVAGLYCWTPLLVAT-------LGNFTE-------VVELLLEYKPNVNALDKDGCTAL 466
           +V+V G   +TPL++A+        GN  E       + + + +     N  D+ G TAL
Sbjct: 2   DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETAL 61
Query: 467 TIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGK 526
            +A +    + A  LL + A  NIQD  G + L  AV    +G+ + L++          
Sbjct: 62  HLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN--------- 112
Query: 527 ERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAK 586
            R T                      DL+    DG TPL+ A +      ++ LI+  A 
Sbjct: 113 -RAT----------------------DLDARMHDGTTPLILAARLAVEGMLEDLINSHAD 149
Query: 587 ITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP 633
           + AVD  G + LH A    +     V ++N  N  +    N   ETP
Sbjct: 150 VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM---QNNREETP 193

>pdb|2F8X|K Chain K, Crystal Structure Of Activated Notch, Csl And Maml On Hes-1 Promoter Dna Sequence Length = 256

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 6/213 (2%)
Query: 119 MVSLC----YRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVR 174
           M++ C      T  S   ED    +  F+    ++ +  D  G TAL  AA+  +    +
Sbjct: 16  MIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAK 75
Query: 175 ELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL-DHGADLEHRDMGGWSPLMWASYK 233
            L+   AD N +DN   +PL  A       V   L+ +   DL+ R   G +PL+ A+  
Sbjct: 76  RLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARL 135
Query: 234 GHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTP 293
                +  L++ +ADVNA  +   S+L WAA     +   +L+K GA  ++ +     TP
Sbjct: 136 AVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN-REETP 194
Query: 294 LVWACRKGHVEIVDILLKAGANVDVAGLWAYMP 326
           L  A R+G  E   +LL   AN D+      +P
Sbjct: 195 LFLAAREGSYETAKVLLDHFANRDITDHMDRLP 227

>pdb|2F8X|K Chain K, Crystal Structure Of Activated Notch, Csl And Maml On Hes-1 Promoter Dna Sequence Length = 256

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 92/229 (40%), Gaps = 49/229 (21%)
Query: 419 GANVDVAGLYCWTPLLVAT-------LGNFTE-------VVELLLEYKPNVNALDKDGCT 464
           G +V+V G   +TPL++A+        GN  E       + + + +     N  D+ G T
Sbjct: 1   GMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGET 60
Query: 465 ALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIP 524
           AL +A +    + A  LL + A  NIQD  G + L  AV    +G+ + L++        
Sbjct: 61  ALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN------- 113
Query: 525 GKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK 584
              R T                      DL+    DG TPL+ A +      ++ LI+  
Sbjct: 114 ---RAT----------------------DLDARMHDGTTPLILAARLAVEGMLEDLINSH 148
Query: 585 AKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP 633
           A + AVD  G + LH A    +     V ++N  N  +    N   ETP
Sbjct: 149 ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM---QNNREETP 194

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 75/151 (49%), Gaps = 5/151 (3%)
Query: 161 LMFAAQKGKLSFVRELVTRGADVNAEDND--NWSPLTYAAREGYTDVCAELLDHGADLEH 218
           L+ AA+ G +  V++L T  + VN  D +    +PL +AA      V   LL HGAD+  
Sbjct: 12  LLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA 70
Query: 219 RDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKK 278
           +D GG  PL  A   GH +   LL+   A VN    +  + L  AA +G  EI  LL++ 
Sbjct: 71  KDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQH 130
Query: 279 GAKVNVGDKVYGTTPLVWACRKGHVEIVDIL 309
           GA     ++  G TPL    + G  +I D+L
Sbjct: 131 GADPTKKNR-DGNTPLDLV-KDGDTDIQDLL 159

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 74/168 (44%), Gaps = 36/168 (21%)
Query: 400 LVWACRKGHVEIVDIL--LKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNA 457
           L+ A + G VE V  L  +++    D+ G    TPL  A   N   VVE LL++  +V+A
Sbjct: 12  LLEAAKAGDVETVKKLCTVQSVNCRDIEGRQS-TPLHFAAGYNRVSVVEYLLQHGADVHA 70
Query: 458 LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKK 517
            DK G   L  AC  G+YE+A LL+  GA +N+ D                      L K
Sbjct: 71  KDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD----------------------LWK 108
Query: 518 YVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPL 565
           +           T ++ A  KG   I KLLL    D     +DG+TPL
Sbjct: 109 F-----------TPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 145

>pdb|2HE0|A Chain A, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant Length = 253

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 6/213 (2%)
Query: 119 MVSLC----YRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVR 174
           M++ C      T  S   ED    +  F+    ++ +  D  G TAL  AA   +    +
Sbjct: 15  MIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAK 74
Query: 175 ELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL-DHGADLEHRDMGGWSPLMWASYK 233
            L+   AD N +DN   +PL  A       V   L+ +   DL+ R   G +PL+ A+  
Sbjct: 75  RLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARL 134
Query: 234 GHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTP 293
                +  L++ +ADVNA  +   S+L WAA     +   +L+K GA  ++ +     TP
Sbjct: 135 AVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN-REETP 193
Query: 294 LVWACRKGHVEIVDILLKAGANVDVAGLWAYMP 326
           L  A R+G  E   +LL   AN D+      +P
Sbjct: 194 LFLAAREGSYETAKVLLDHFANRDITDHMDRLP 226

>pdb|2HE0|A Chain A, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant Length = 253

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 90/227 (39%), Gaps = 49/227 (21%)
Query: 421 NVDVAGLYCWTPLLVATL-------GNFTE-------VVELLLEYKPNVNALDKDGCTAL 466
           +V+V G   +TPL++A+        GN  E       + + + +     N  D+ G TAL
Sbjct: 2   DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGATAL 61
Query: 467 TIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGK 526
            +A      + A  LL + A  NIQD  G + L  AV    +G+ + L++          
Sbjct: 62  HLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN--------- 112
Query: 527 ERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAK 586
            R T                      DL+    DG TPL+ A +      ++ LI+  A 
Sbjct: 113 -RAT----------------------DLDARMHDGTTPLILAARLAVEGMLEDLINSHAD 149
Query: 587 ITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP 633
           + AVD  G + LH A    +     V ++N  N  +    N   ETP
Sbjct: 150 VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM---QNNREETP 193

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 74/151 (49%), Gaps = 5/151 (3%)
Query: 161 LMFAAQKGKLSFVRELVTRGADVNAED--NDNWSPLTYAAREGYTDVCAELLDHGADLEH 218
           L+ AA+ G +  V++L T  + VN  D      +PL +AA      V   LL HGAD+  
Sbjct: 14  LLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA 72
Query: 219 RDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKK 278
           +D GG  PL  A   GH +   LL+   A VN    +  + L  AA +G  EI  LL++ 
Sbjct: 73  KDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQH 132
Query: 279 GAKVNVGDKVYGTTPLVWACRKGHVEIVDIL 309
           GA     ++  G TPL    + G  +I D+L
Sbjct: 133 GADPTKKNR-DGNTPLDLV-KDGDTDIQDLL 161

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 74/168 (44%), Gaps = 36/168 (21%)
Query: 400 LVWACRKGHVEIVDIL--LKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNA 457
           L+ A + G VE V  L  +++    D+ G    TPL  A   N   VVE LL++  +V+A
Sbjct: 14  LLEAAKAGDVETVKKLCTVQSVNCRDIEGRQS-TPLHFAAGYNRVSVVEYLLQHGADVHA 72
Query: 458 LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKK 517
            DK G   L  AC  G+YE+A LL+  GA +N+ D                      L K
Sbjct: 73  KDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD----------------------LWK 110
Query: 518 YVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPL 565
           +           T ++ A  KG   I KLLL    D     +DG+TPL
Sbjct: 111 F-----------TPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 147

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 4/198 (2%)
Query: 398 TPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNA 457
           +P+  A   GH   +  L+  G  V++      +PL  A LG     V++LL++   VN 
Sbjct: 5   SPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNG 64
Query: 458 LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIH-AVKGGHRGIVEALLK 516
           +  D  T L  AC  G ++   LLL  GA  ++Q  S  ++ IH A + GH   V +L+ 
Sbjct: 65  VTADWHTPLFNACVSGSWDCVNLLLQHGA--SVQPESDLASPIHEAARRGHVECVNSLIA 122
Query: 517 KYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEA 576
              ++D       T +Y A E      +K LL +  D+    K  D+PL    +T + E 
Sbjct: 123 YGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVARTASEEL 181
Query: 577 IQMLIDKKAKITAVDKRG 594
             +L+D  A   A +  G
Sbjct: 182 ACLLMDFGADTQAKNAEG 199

>pdb|2F8Y|A Chain A, Crystal Structure Of Human Notch1 Ankyrin Repeats To 1.55a Resolution. Length = 223

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 2/189 (1%)
Query: 139 LQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAA 198
           +  F+    ++ +  D  G TAL  AA+  +    + L+   AD N +DN   +PL  A 
Sbjct: 7   ISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAV 66
Query: 199 REGYTDVCAELL-DHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHI 257
                 V   L+ +   DL+ R   G +PL+ A+       +  L++ +ADVNA  +   
Sbjct: 67  SADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGK 126
Query: 258 SSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
           S+L WAA     +   +L+K GA  ++ +     TPL  A R+G  E   +LL   AN D
Sbjct: 127 SALHWAAAVNNVDAAVVLLKNGANKDMQNN-REETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 318 VAGLWAYMP 326
           +      +P
Sbjct: 186 ITDHMDRLP 194

>pdb|2F8Y|A Chain A, Crystal Structure Of Human Notch1 Ankyrin Repeats To 1.55a Resolution. Length = 223

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 71/178 (39%), Gaps = 35/178 (19%)
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           N  D+ G TAL +A +    + A  LL + A  NIQD  G + L  AV    +G+ + L+
Sbjct: 19  NQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILI 78
Query: 516 KKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLE 575
           +           R T                      DL+    DG TPL+ A +     
Sbjct: 79  RN----------RAT----------------------DLDARMHDGTTPLILAARLAVEG 106
Query: 576 AIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP 633
            ++ LI+  A + AVD  G + LH A    +     V ++N  N  +    N   ETP
Sbjct: 107 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM---QNNREETP 161

>pdb|2QC9|A Chain A, Mouse Notch 1 Ankyrin Repeat Intracellular Domain Length = 210

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 2/189 (1%)
Query: 139 LQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAA 198
           +  F+    ++ +  D  G TAL  AA+  +    + L+   AD   +DN   +PL  A 
Sbjct: 4   ISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAAV 63
Query: 199 REGYTDVCAELL-DHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHI 257
                 V   LL +   DL+ R   G +PL+ A+       +  L++ +ADVNA  +   
Sbjct: 64  SADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGK 123
Query: 258 SSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
           S+L WAA     +   +L+K GA  ++ +     TPL  A R+G  E   +LL   AN D
Sbjct: 124 SALHWAAAVNNVDAAVVLLKNGANKDMQNN-KEETPLFLAAREGSYETAKVLLDHFANRD 182
Query: 318 VAGLWAYMP 326
           +      +P
Sbjct: 183 ITDHMDRLP 191

>pdb|2QC9|A Chain A, Mouse Notch 1 Ankyrin Repeat Intracellular Domain Length = 210

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 4/158 (2%)
Query: 477 IAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAV 536
           I+  +    +  N  DR+G++ L  A +       + LL+   D  I     +T ++ AV
Sbjct: 4   ISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAAV 63
Query: 537 EKGNVPILKLLLTANP-DLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGD 595
                 + ++LL     DL+    DG TPL+ A +      ++ LI+  A + AVD  G 
Sbjct: 64  SADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGK 123
Query: 596 TVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP 633
           + LH A    +     V ++N  N  +    N   ETP
Sbjct: 124 SALHWAAAVNNVDAAVVLLKNGANKDM---QNNKEETP 158

>pdb|1MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, 44 Structures Length = 118

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 51/100 (51%)
Query: 161 LMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRD 220
            M+A + G L  V++ V +G DVN        PL YAA  G  ++   LL  GAD+   D
Sbjct: 6   FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD 65
Query: 221 MGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSL 260
               +PL+ A Y+GH   V LLL K AD    G   +++L
Sbjct: 66  KHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAL 105

>pdb|1MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, 44 Structures Length = 118

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 227 LMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGD 286
            MWA   G  D V   + K  DVN         L +AA  G  EI+  L+ KGA +N  D
Sbjct: 6   FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD 65
Query: 287 KVYGTTPLVWACRKGHVEIVDILLKAGANVDVAG 320
           K +  TPL+ A  +GHV  V +LL  GA+  V G
Sbjct: 66  K-HHITPLLSAVYEGHVSCVKLLLSKGADKTVKG 98

>pdb|1MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, 44 Structures Length = 118

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 485 GAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPIL 544
           G  +N     G   L +A   G   I+E LL K  D++ P K   T + +AV +G+V  +
Sbjct: 25  GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCV 84
Query: 545 KLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLI 581
           KLLL+   D  +   DG    L A++  + +AI+ L+
Sbjct: 85  KLLLSKGADKTVKGPDG----LTALEATDNQAIKALL 117

>pdb|3AAA|C Chain C, Crystal Structure Of Actin Capping Protein In Complex With V-1 Length = 123

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 47/93 (50%)
Query: 161 LMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRD 220
            M+A + G L  V++ V +G DVN        PL YAA  G  ++   LL  GAD+   D
Sbjct: 11  FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD 70
Query: 221 MGGWSPLMWASYKGHTDTVALLLDKNADVNAHG 253
               +PL+ A Y+GH   V LLL K AD    G
Sbjct: 71  KHHITPLLSAVYEGHVSCVKLLLSKGADKTVKG 103

>pdb|3AAA|C Chain C, Crystal Structure Of Actin Capping Protein In Complex With V-1 Length = 123

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 227 LMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGD 286
            MWA   G  D V   + K  DVN         L +AA  G  EI+  L+ KGA +N  D
Sbjct: 11  FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD 70
Query: 287 KVYGTTPLVWACRKGHVEIVDILLKAGANVDVAG 320
           K +  TPL+ A  +GHV  V +LL  GA+  V G
Sbjct: 71  K-HHITPLLSAVYEGHVSCVKLLLSKGADKTVKG 103

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 49/85 (57%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADVNA+D D ++PL  AAREG+ ++   LL  GAD+ 
Sbjct: 3   GKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 62
Query: 218 HRDMGGWSPLMWASYKGHTDTVALL 242
            +D  G +    +   G+ D   +L
Sbjct: 63  AQDKFGKTAFDISIDNGNEDLAEIL 87

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 260 LIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDV 318
           L+ AA  G  + V +L+  GA VN  DK  G TPL  A R+GH+EIV++LLKAGA+V+ 
Sbjct: 6   LLEAARAGQDDEVRILMANGADVNAKDK-DGYTPLHLAAREGHLEIVEVLLKAGADVNA 63

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL A      + V +L+    +VNA DKDG T L +A ++G+ EI  +LL +GA +N QD
Sbjct: 6   LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQD 65
Query: 493 RSGDSNLIHAVKGGHRGIVEALLK 516
           + G +    ++  G+  + E L K
Sbjct: 66  KFGKTAFDISIDNGNEDLAEILQK 89

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER 528
           A + G  +   +L+ +GA +N +D+ G + L  A + GH  IVE LLK   DV+   K  
Sbjct: 9   AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFG 68
Query: 529 KTAVYTAVEKGNVPILKLLLTA 550
           KTA   +++ GN  + ++L  A
Sbjct: 69  KTAFDISIDNGNEDLAEILQKA 90

>pdb|2FO1|E Chain E, Crystal Structure Of The Csl-Notch-Mastermind Ternary Complex Bound To Dna Length = 373

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 96/217 (44%), Gaps = 19/217 (8%)
Query: 416 LKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYY 475
           + AGA+V+       TPL +A L     +V  L +   +    +K   +AL  A  +  +
Sbjct: 153 IAAGADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAANRDF 212
Query: 476 EIAVLLLNSGAY---INIQDRSGDSNL-IHAVKGGHRGIVEA--LLKKYVDVDIPGKERK 529
              V  LNS      I   DR+G + L I A   G   +  A  L++K   VD  G  RK
Sbjct: 213 GXXVYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 272
Query: 530 --------TAVYTAVEKGNVPILKLLLT---ANPDLEIATKDGDTPLLKAVKTRNLEAIQ 578
                   TA++ A +  N PI+K L+    +N D +   +DG TP+  A +   +E + 
Sbjct: 273 DSEKYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQ--DEDGKTPIXLAAQEGRIEVVX 330
Query: 579 MLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIR 615
            LI + A + AVD    T   +A       IV++F R
Sbjct: 331 YLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 367

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 2/174 (1%)
Query: 154 DDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL-DH 212
           D  G T+L  AA+  +    + L+  GAD N++DN   +PL  A       V   LL + 
Sbjct: 48  DKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNR 107
Query: 213 GADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIV 272
             +L  R   G +PL+ A+       V  L+  +AD+NA  N   ++L WAA    TE V
Sbjct: 108 ATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAV 167
Query: 273 ALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMP 326
            +L+   A  +  D     TPL  A R+G  E    LL   AN ++      +P
Sbjct: 168 NILLMHHANRDAQDD-KDETPLFLAAREGSYEASKALLDNFANREITDHMDRLP 220

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 22/189 (11%)
Query: 443 EVVELLLEYKPNVNA-LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIH 501
           +V+  LL     +NA +DK G T+L +A +    + A  LL++GA  N QD +G + L  
Sbjct: 31  QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 90
Query: 502 AVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPIL-----------KLLLTA 550
           AV     G+ + LL+           R T +   +  G  P++           + L+TA
Sbjct: 91  AVAADAMGVFQILLRN----------RATNLNARMHDGTTPLILAARLAIEGMVEDLITA 140
Query: 551 NPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIV 610
           + D+  A   G T L  A    N EA+ +L+   A   A D + +T L +A R  S    
Sbjct: 141 DADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEAS 200
Query: 611 EVFIRNPKN 619
           +  + N  N
Sbjct: 201 KALLDNFAN 209

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 46/95 (48%)
Query: 157 GGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADL 216
           G T L  A+ KG +  V  L+  G+D N +D+  W+PL  A   G+  V   LL H A +
Sbjct: 10  GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV 69
Query: 217 EHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNA 251
                   SPL  A+  GH D V LLL   A  NA
Sbjct: 70  NTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 194 LTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHG 253
           L  A+ +G       LL +G+D   +D  GW+PL  A   GH   V LLL   A VN  G
Sbjct: 14  LHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTG 73
Query: 254 NYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVW 296
             + S L  AA  G+ +IV LL+  GA  N  + ++G  P+ +
Sbjct: 74  YQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVN-IFGLRPVDY 115

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 50/94 (53%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G T L  A  KG +  V+ LL+ G++ +V     WTPL  A      +VVELLL++K  V
Sbjct: 10  GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV 69
Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYIN 489
           N       + L  A K+G+ +I  LLL+ GA  N
Sbjct: 70  NTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRN 103

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%)
Query: 462 GCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDV 521
           G T L IA   G       LL +G+  N++D +G + L  A   GH  +VE LL+    V
Sbjct: 10  GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV 69
Query: 522 DIPGKERKTAVYTAVEKGNVPILKLLLT 549
           +  G +  + ++ A + G+V I+KLLL+
Sbjct: 70  NTTGYQNDSPLHDAAKNGHVDIVKLLLS 97

>pdb|1BD8|A Chain A, Structure Of Cdk Inhibitor P19ink4d Length = 156

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 127 LQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTAL---MFAAQKGKLSFVRELVTRGADV 183
           L    A  ++  ++  L  +    D  +  G TAL   MF    G  +   EL+ +GA  
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF----GSTAIALELLKQGASP 61
Query: 184 NAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLL 243
           N +D    SP+  AAR G+ D    L++HGAD+   D  G  P+  A  +GHT  V+ L 
Sbjct: 62  NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121
Query: 244 DKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
            + +D++      ++ L  A  RG  ++V +L
Sbjct: 122 AE-SDLHRRDARGLTPLELALQRGAQDLVDIL 152

>pdb|1BD8|A Chain A, Structure Of Cdk Inhibitor P19ink4d Length = 156

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Query: 436 ATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSG 495
           A  G+  EV  LL     + +AL++ G TAL +    G   IA+ LL  GA  N+QD SG
Sbjct: 10  AARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGASPNVQDTSG 68
Query: 496 DSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLE 555
            S +  A + G    ++ L++   DV++P       ++ AV++G+  ++   L A  DL 
Sbjct: 69  TSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVS-FLAAESDLH 127
Query: 556 IATKDGDTPLLKAVKTRNLEAIQML 580
                G TPL  A++    + + +L
Sbjct: 128 RRDARGLTPLELALQRGAQDLVDIL 152

>pdb|1BI8|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 166

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 8/152 (5%)
Query: 127 LQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTAL---MFAAQKGKLSFVRELVTRGADV 183
           L    A  ++  ++  L  +    D  +  G TAL   MF    G  +   EL+ +GA  
Sbjct: 12  LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF----GSTAIALELLKQGASP 67
Query: 184 NAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLL 243
           N +D    SP+  AAR G+ D    L++HGAD+   D  G  P+  A  +GHT  V+ L 
Sbjct: 68  NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 127
Query: 244 DKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
              +D++      ++ L  A  RG  ++V +L
Sbjct: 128 -AESDLHRRDARGLTPLELALQRGAQDLVDIL 158

>pdb|1BI8|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 166

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Query: 436 ATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSG 495
           A  G+  EV  LL     + +AL++ G TAL +    G   IA+ LL  GA  N+QD SG
Sbjct: 16  AARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGASPNVQDTSG 74
Query: 496 DSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLE 555
            S +  A + G    ++ L++   DV++P       ++ AV++G+  ++   L A  DL 
Sbjct: 75  TSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVS-FLAAESDLH 133
Query: 556 IATKDGDTPLLKAVKTRNLEAIQML 580
                G TPL  A++    + + +L
Sbjct: 134 RRDARGLTPLELALQRGAQDLVDIL 158

>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The Proteasome Subunit, Rpt3 Length = 228

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANV---DVAGLYCWTPLLVA-TLGNFTEVVELLLE- 450
           G  PL W+      EI   LL    NV   D      WTP  +A ++GN  EVV+ L + 
Sbjct: 36  GRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNL-EVVKSLYDR 94
Query: 451 -YKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRG 509
             KP++N +   G T L +A    ++E++  L+ +GA + I+D+     L  A   G   
Sbjct: 95  PLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLK 154
Query: 510 IVEAL--LKKYVDVDIPGKERKTAVYTAVEKGN 540
           ++E L  L K   V+   K+  T ++ A+ +G+
Sbjct: 155 LIELLCGLGKSA-VNWQDKQGWTPLFHALAEGH 186

>pdb|1BLX|B Chain B, P19ink4dCDK6 COMPLEX Length = 166

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 8/152 (5%)
Query: 127 LQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTAL---MFAAQKGKLSFVRELVTRGADV 183
           L    A  ++  ++  L  +    D  +  G TAL   MF    G  +   EL+ +GA  
Sbjct: 12  LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF----GSPAVALELLKQGASP 67
Query: 184 NAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLL 243
           N +D    SP+  AAR G+ D    L++HGAD+   D  G  P+  A  +GH+  V+ L 
Sbjct: 68  NVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVSFLA 127
Query: 244 DKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
            + +D++      ++ L  A  RG   ++ +L
Sbjct: 128 PE-SDLHHRDASGLTPLELARQRGAQNLMDIL 158

>pdb|1BLX|B Chain B, P19ink4dCDK6 COMPLEX Length = 166

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Query: 436 ATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSG 495
           A  G+  EV  LL     + +AL++ G TAL +    G   +A+ LL  GA  N+QD SG
Sbjct: 16  AARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSPAVALELLKQGASPNVQDASG 74
Query: 496 DSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLE 555
            S +  A + G    ++ L++   DV+         ++ A+ +G+  ++   L    DL 
Sbjct: 75  TSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVS-FLAPESDLH 133
Query: 556 IATKDGDTPL 565
                G TPL
Sbjct: 134 HRDASGLTPL 143

>pdb|1AP7|A Chain A, P19-Ink4d From Mouse, Nmr, 20 Structures Length = 168

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 8/152 (5%)
Query: 127 LQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTAL---MFAAQKGKLSFVRELVTRGADV 183
           L    A  ++  ++  L  +    D  +  G TAL   MF    G  +   EL+ +GA  
Sbjct: 14  LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF----GSPAVALELLKQGASP 69
Query: 184 NAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLL 243
           N +D    SP+  AAR G+ D    L++HGAD+   D  G  P+  A  +GH+  V+ L 
Sbjct: 70  NVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVSFLA 129
Query: 244 DKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
            + +D++      ++ L  A  RG   ++ +L
Sbjct: 130 PE-SDLHHRDASGLTPLELARQRGAQNLMDIL 160

>pdb|1AP7|A Chain A, P19-Ink4d From Mouse, Nmr, 20 Structures Length = 168

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Query: 436 ATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSG 495
           A  G+  EV  LL     + +AL++ G TAL +    G   +A+ LL  GA  N+QD SG
Sbjct: 18  AARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSPAVALELLKQGASPNVQDASG 76
Query: 496 DSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLE 555
            S +  A + G    ++ L++   DV+         ++ A+ +G+  ++   L    DL 
Sbjct: 77  TSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVS-FLAPESDLH 135
Query: 556 IATKDGDTPL 565
                G TPL
Sbjct: 136 HRDASGLTPL 145

>pdb|1WG0|A Chain A, Structural Comparison Of Nas6p Protein Structures In Two Different Crystal Forms Length = 243

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANV---DVAGLYCWTPLLVA-TLGNFTEVVELLLE- 450
           G  PL W+      EI   LL    NV   D      WTP  +A ++GN  EVV+ L + 
Sbjct: 36  GRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNL-EVVKSLYDR 94
Query: 451 -YKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRG 509
             KP++N +   G T L +A    ++E++  L+ +GA + I+D+     L  A   G   
Sbjct: 95  PLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLK 154
Query: 510 IVEAL--LKKYVDVDIPGKERKTAVYTAVEKGN 540
           ++E L  L K   V+   K+  T ++ A+ +G+
Sbjct: 155 LIELLCGLGKSA-VNWQDKQGWTPLFHALAEGH 186

>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein Gankyrin, An Interactor Of Rb And Cdk46 Length = 231

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 396 GTTPLVWACRKGHVEIVDILLKAGANV---DVAGLYCWTPLLVA-TLGNFTEVVELLLE- 450
           G  PL W+      EI   LL    NV   D      WTP  +A ++GN  EVV+ L + 
Sbjct: 36  GRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNL-EVVKSLYDR 94
Query: 451 -YKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRG 509
             KP++N +   G T L +A    ++E++  L+ +GA + I+D+     L  A   G   
Sbjct: 95  PLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLK 154
Query: 510 IVEAL--LKKYVDVDIPGKERKTAVYTAVEKGN 540
           ++E L  L K   V+   K+  T ++ A+ +G+
Sbjct: 155 LIELLCGLGKSA-VNWQDKQGWTPLFHALAEGH 186

>pdb|4HBD|A Chain A, Crystal Structure Of Kank2 Ankyrin Repeats Length = 276

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 394 SYGTTPLVWACRKGHVEIVDILLKAG-ANVDVAGLYCWTPLLV---ATLGNFTEVVELLL 449
           S G T L ++    +  +V  LL +G   VD      ++P+++   ATL    ++  +L 
Sbjct: 109 SNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQ 168
Query: 450 EYK-PNVNA-LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGH 507
            ++  N+NA   + G TAL +A   G  ++   LL   A +N+QD  G + L+ A + GH
Sbjct: 169 LFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGH 228
Query: 508 RGIVEALLK-KYVDVDIPGKERKTAVYTAVEKGNVPILKLL 547
           + I   LL     D+ +  ++  TA+  A++ G   I  +L
Sbjct: 229 KEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASML 269

>pdb|4HBD|A Chain A, Crystal Structure Of Kank2 Ankyrin Repeats Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 9/183 (4%)
Query: 438 LGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSG-AYINIQDRSGD 496
           L  F  +   LL+Y   VN  D +G TAL  +     + +   LL+SG   ++ Q+R+G 
Sbjct: 89  LVTFRAMSARLLDYV--VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGY 146
Query: 497 SNLIHAVKGGHRGI--VEALLKKYVDVDIPGKER---KTAVYTAVEKGNVPILKLLLTAN 551
           S ++       +    +E +L+ +   +I  K     +TA+  AV  G V ++K LL   
Sbjct: 147 SPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACE 206
Query: 552 PDLEIATKDGDTPLLKAVKTRNLEAIQMLID-KKAKITAVDKRGDTVLHIAMRARSKTIV 610
            D+ +   DG T L+ A +  + E   +L+      I+  D+ G T L +A+ A    I 
Sbjct: 207 ADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIA 266
Query: 611 EVF 613
            + 
Sbjct: 267 SML 269

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L+ A R G  + V IL+  GA+V        TPL +A      EVV+LLLE   +VNA D
Sbjct: 10  LLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQD 69
Query: 460 KDGCTALTIACKDGYYEIAVLL 481
           K G TA  I+  +G  ++A +L
Sbjct: 70  KFGKTAFDISIDNGNEDLAEIL 91

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL A      + V +L+    +V A DK+G T L +A ++G+ E+  LLL +GA +N QD
Sbjct: 10  LLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQD 69
Query: 493 RSGDSNLIHAVKGGHRGIVEAL 514
           + G +    ++  G+  + E L
Sbjct: 70  KFGKTAFDISIDNGNEDLAEIL 91

>pdb|3EHQ|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor Length = 222

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 185 AEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLD 244
           AE  DN  PL  AA+ G      E LD+   +   D  G + L WA + GH D V  L  
Sbjct: 70  AESIDN--PLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEXLFT 127
Query: 245 K-NADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNV 284
           + N ++N       ++L  AA +GY +IV LL+ KGA+ ++
Sbjct: 128 QPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDL 168

>pdb|3EHQ|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor Length = 222

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Query: 435 VATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIA-VLLLNSGAYINIQDR 493
            A  GN + + E L + +  VN LDK G TAL  AC  G+ +I   L       +N Q++
Sbjct: 80  AAKRGNLSWLRECL-DNRVGVNGLDKAGSTALYWACHGGHKDIVEXLFTQPNIELNQQNK 138
Query: 494 SGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILK 545
            GD+ L  A   G+  IV+ LL K    D+   E+K A   A       +LK
Sbjct: 139 LGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDXATNAACASLLK 190

>pdb|3EHQ|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor Length = 222

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 562 DTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNI 621
           D PL +A K  NL  ++  +D +  +  +DK G T L+ A     K IVE     P  NI
Sbjct: 74  DNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEXLFTQP--NI 131
Query: 622 LLYRPNKAGET 632
            L + NK G+T
Sbjct: 132 ELNQQNKLGDT 142

>pdb|4F1P|A Chain A, Crystal Structure Of Mutant S554d For Arfgap And Ank Repeat Domain Of Acap1 Length = 368

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 59/140 (42%), Gaps = 10/140 (7%)
Query: 160 ALMFAA--QKGKLSFVRELVTRGADVN--AEDNDNWSPLTYAAREGYTDVCAELLDHGAD 215
           AL+F A      L  + + +  GADVN      DN +PL  A        C  LL +GA+
Sbjct: 201 ALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN 260
Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
           +   D  G  PL  A+  GHT    L L + AD+ A  +     L  A      +IV LL
Sbjct: 261 VNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLL 320
Query: 276 ------VKKGAKVNVGDKVY 289
                   + A+   GD+ Y
Sbjct: 321 RLAKMREAEAAQGQAGDETY 340

>pdb|3JUE|A Chain A, Crystal Structure Of Arfgap And Ank Repeat Domain Of Acap1 Length = 368

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 59/140 (42%), Gaps = 10/140 (7%)
Query: 160 ALMFAA--QKGKLSFVRELVTRGADVN--AEDNDNWSPLTYAAREGYTDVCAELLDHGAD 215
           AL+F A      L  + + +  GADVN      DN +PL  A        C  LL +GA+
Sbjct: 201 ALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN 260
Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
           +   D  G  PL  A+  GHT    L L + AD+ A  +     L  A      +IV LL
Sbjct: 261 VNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLL 320
Query: 276 ------VKKGAKVNVGDKVY 289
                   + A+   GD+ Y
Sbjct: 321 RLAKMREAEAAQGQAGDETY 340

>pdb|3T9K|A Chain A, Crystal Structure Of Acap1 C-portion Mutant S554d Fused With Integrin Beta1 Peptide Length = 390

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 60/140 (42%), Gaps = 10/140 (7%)
Query: 160 ALMFAA--QKGKLSFVRELVTRGADVNAED--NDNWSPLTYAAREGYTDVCAELLDHGAD 215
           AL+F A      L  + + +  GADVN  +   DN +PL  A        C  LL +GA+
Sbjct: 201 ALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN 260
Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
           +   D  G  PL  A+  GHT    L L + AD+ A  +     L  A      +IV LL
Sbjct: 261 VNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLL 320
Query: 276 ------VKKGAKVNVGDKVY 289
                   + A+   GD+ Y
Sbjct: 321 RLAKMREAEAAQGQAGDETY 340

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 47/85 (55%)
Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L+ AA+ G+   VR L+  GADV A+D +  +PL  AAR G+ +V   LL+ GAD+ 
Sbjct: 25  GKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVX 84
Query: 218 HRDMGGWSPLMWASYKGHTDTVALL 242
            +D  G +    +   G+ D   +L
Sbjct: 85  AQDKFGKTAFDISIDNGNEDLAEIL 109

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 44/82 (53%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L+ A R G  + V IL+  GA+V        TPL +A      EVV+LLLE   +V A D
Sbjct: 28  LLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQD 87
Query: 460 KDGCTALTIACKDGYYEIAVLL 481
           K G TA  I+  +G  ++A +L
Sbjct: 88  KFGKTAFDISIDNGNEDLAEIL 109

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 433 LLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
           LL A      + V +L+    +V A DK+G T L +A ++G+ E+  LLL +GA +  QD
Sbjct: 28  LLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQD 87
Query: 493 RSGDSNLIHAVKGGHRGIVEAL 514
           + G +    ++  G+  + E L
Sbjct: 88  KFGKTAFDISIDNGNEDLAEIL 109

>pdb|1D9S|A Chain A, Tumor Suppressor P15(Ink4b) Structure By Comparative Modeling And Nmr Data Length = 136

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 221 MGGWSP--LMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKK 278
           +GG S   L  A+ +G  +TV  LL+  AD NA   +     I     G  ++  LL+  
Sbjct: 8   LGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFG-RRPIQVMMMGSAQVAELLLLH 66
Query: 279 GAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPL 327
           GA+ N  D    T P+  A R+G ++ + +L +AGA +DV   W  +P+
Sbjct: 67  GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPV 115

>pdb|1D9S|A Chain A, Tumor Suppressor P15(Ink4b) Structure By Comparative Modeling And Nmr Data Length = 136

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L  A  +G VE V  LL+AGA+ +    +   P+ V  +G+  +V ELLL +    N  D
Sbjct: 16  LATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGS-AQVAELLLLHGAEPNCAD 74
Query: 460 KDGCT-ALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
               T  +  A ++G+ +  V+L  +GA +++ D  G   +  A + GHR I   L
Sbjct: 75  PATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYL 130

>pdb|1BU9|A Chain A, Solution Structure Of P18-Ink4c, 21 Structures Length = 168

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Query: 157 GGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADL 216
           G TAL    + G     R L+ RGA+ + +D   ++ +  AAR G+ D    LL+  AD+
Sbjct: 38  GRTALQ-VMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADV 96
Query: 217 EHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYH-ISSLIWAAGRGYTEIVALL 275
              D  G  PL  A+ +GH   V  L+   A    H N+   ++   A   G  E+V+L+
Sbjct: 97  NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Query: 276 VKKGA 280
              GA
Sbjct: 157 QANGA 161

>pdb|1IHB|A Chain A, Crystal Structure Of P18-Ink4c(Ink6) Length = 162

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Query: 157 GGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADL 216
           G TAL    + G     R L+ RGA+ + +D   ++ +  AAR G+ D    LL+  AD+
Sbjct: 38  GRTALQ-VMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADV 96
Query: 217 EHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYH-ISSLIWAAGRGYTEIVALL 275
              D  G  PL  A+ +GH   V  L+   A    H N+   ++   A   G  E+V+L+
Sbjct: 97  NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Query: 276 VKKGA 280
              GA
Sbjct: 157 QANGA 161

>pdb|1MX6|A Chain A, Structure Of P18ink4c (F92n) Length = 168

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 168 GKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPL 227
           G     R L+ RGA+ + +D   ++ +  AAR G+ D    LL++ AD+   D  G  PL
Sbjct: 48  GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPL 107
Query: 228 MWASYKGHTDTVALLLDKNADVNAHGNYHISSLI-WAAGRGYTEIVALLVKKGA 280
             A+ +GH   V  L+   A    H N+   +    A   G  E+V+L+   GA
Sbjct: 108 HLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>pdb|1MX6|A Chain A, Structure Of P18ink4c (F92n) Length = 168

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L  A  +G +E +  LL+   NV+    +  T L V  LGN  E+   LL    N +  D
Sbjct: 9   LASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGN-PEIARRLLLRGANPDLKD 67
Query: 460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLK 516
           + G   +  A + G+ +    LL + A +NI+D  G+  L  A K GH  +VE L+K
Sbjct: 68  RTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVK 124

>pdb|1BI7|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structure Of The Cdk6-P16ink4a Tumor Suppressor Complex Length = 156

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L  A  +G VE V  LL+AGAN +    Y   P+ V  +G+   V ELLL +    N  D
Sbjct: 16  LATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGS-ARVAELLLLHGAEPNCAD 74
Query: 460 KDGCT-ALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
               T  +  A ++G+ +  V+L  +GA ++++D  G   +  A + GHR +   L
Sbjct: 75  PATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 130

>pdb|1MX4|A Chain A, Structure Of P18ink4c (F82q) Length = 168

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 168 GKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPL 227
           G     R L+ RGA+ + +D   ++ +  AAR G  D    LL+  AD+   D  G  PL
Sbjct: 48  GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPL 107
Query: 228 MWASYKGHTDTVALLLDKNADVNAHGNYHISSLI-WAAGRGYTEIVALLVKKGA 280
             A+ +GH   V  L+   A    H N+   +    A   G  E+V+L+   GA
Sbjct: 108 HLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>pdb|1YCS|B Chain B, P53-53bp2 Complex Length = 239

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 33/61 (54%)
Query: 154 DDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHG 213
           +D G TAL  A   G    V+ LV  G +VNA D+D W+PL  AA      VC  L++ G
Sbjct: 67  NDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESG 126
Query: 214 A 214
           A
Sbjct: 127 A 127

>pdb|1YCS|B Chain B, P53-53bp2 Complex Length = 239

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 506 GHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPL 565
           G   +V+ ++ +  D  +P  E  TA++ AV  G+  I+K L+    ++  A  DG TPL
Sbjct: 48  GEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPL 107
Query: 566 LKAVKTRNLEAIQMLIDKKAKITAV 590
             A    N++  + L++  A + A+
Sbjct: 108 HCAASCNNVQVCKFLVESGAAVFAM 132

>pdb|4A63|B Chain B, Crystal Structure Of The P73-Aspp2 Complex At 2.6a Resolution Length = 239

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 33/61 (54%)
Query: 154 DDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHG 213
           +D G TAL  A   G    V+ LV  G +VNA D+D W+PL  AA      VC  L++ G
Sbjct: 67  NDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESG 126
Query: 214 A 214
           A
Sbjct: 127 A 127

>pdb|4A63|B Chain B, Crystal Structure Of The P73-Aspp2 Complex At 2.6a Resolution Length = 239

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 506 GHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPL 565
           G   +V+ ++ +  D  +P  E  TA++ AV  G+  I+K L+    ++  A  DG TPL
Sbjct: 48  GEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPL 107
Query: 566 LKAVKTRNLEAIQMLIDKKAKITAV 590
             A    N++  + L++  A + A+
Sbjct: 108 HCAASCNNVQVCKFLVESGAAVFAM 132

>pdb|1MX2|A Chain A, Structure Of F71n Mutant Of P18ink4c Length = 168

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 168 GKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPL 227
           G     R L+ RGA+ + +D    + +  AAR G+ D    LL+  AD+   D  G  PL
Sbjct: 48  GNPEIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPL 107
Query: 228 MWASYKGHTDTVALLLDKNADVNAHGNYHISSLI-WAAGRGYTEIVALLVKKGA 280
             A+ +GH   V  L+   A    H N+   +    A   G  E+V+L+   GA
Sbjct: 108 HLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>pdb|1MX2|A Chain A, Structure Of F71n Mutant Of P18ink4c Length = 168

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L  A  +G +E +  LL+   NV+    +  T L V  LGN  E+   LL    N +  D
Sbjct: 9   LASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGN-PEIARRLLLRGANPDLKD 67
Query: 460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLK 516
           + G   +  A + G+ +    LL   A +NI+D  G+  L  A K GH  +VE L+K
Sbjct: 68  RTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVK 124

>pdb|1YMP|A Chain A, The Crystal Structure Of A Partial Mouse Notch-1 Ankyrin Domain: Repeats 4 Through 7 Preserve An Ankyrin Fold Length = 135

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Query: 209 LLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGY 268
           L +   DL+ R   G +PL+ A+       +  L++ +ADVNA  +   S+L WAA    
Sbjct: 1   LRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNN 60
Query: 269 TEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMP 326
            +   +L+K GA  ++ +     TPL  A R+G  E   +LL   AN D+      +P
Sbjct: 61  VDAAVVLLKNGANKDMQNN-KEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLP 117

>pdb|2VGE|A Chain A, Crystal Structure Of The C-Terminal Region Of Human Iaspp Length = 229

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 34/61 (55%)
Query: 154 DDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHG 213
           ++ G TAL  A      S V  L+T GA+VN+ D+  W+PL  AA    T +C  L+ HG
Sbjct: 51  NEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHG 110
Query: 214 A 214
           A
Sbjct: 111 A 111

>pdb|1DC2|A Chain A, Solution Nmr Structure Of Tumor Suppressor P16ink4a, 20 Structures Length = 156

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 227 LMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGD 286
           L  A+ +G  + V  LL+  A  NA  +Y     I     G   +  LL+  GA+ N  D
Sbjct: 16  LATAAARGRVEEVRALLEAGALPNAPNSYG-RRPIQVMMMGSARVAELLLLHGAEPNCAD 74
Query: 287 KVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPL 327
               T P+  A R+G ++ + +L +AGA +DV   W  +P+
Sbjct: 75  PATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPV 115

>pdb|1DC2|A Chain A, Solution Nmr Structure Of Tumor Suppressor P16ink4a, 20 Structures Length = 156

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 400 LVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
           L  A  +G VE V  LL+AGA  +    Y   P+ V  +G+   V ELLL +    N  D
Sbjct: 16  LATAAARGRVEEVRALLEAGALPNAPNSYGRRPIQVMMMGS-ARVAELLLLHGAEPNCAD 74
Query: 460 KDGCT-ALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
               T  +  A ++G+ +  V+L  +GA ++++D  G   +  A + GHR +   L
Sbjct: 75  PATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 130

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	651
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-110
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-109
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-106
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	7e-88
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-72
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-64
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-60
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-17
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	7e-85
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-83
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	9e-52
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-50
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	5e-50
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-47
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	5e-44
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	6e-38
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-18
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-06
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-80
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	8e-62
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	6e-55
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	4e-48
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	4e-47
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-44
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	5e-42
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	5e-38
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-28
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-21
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	9e-72
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-52
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-49
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	7e-48
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	9e-41
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-37
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-30
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	4e-23
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	9e-12
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-05
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	9e-68
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-62
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-57
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	9e-57
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	6e-52
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-47
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-46
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	7e-44
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	5e-23
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-64
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-54
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	5e-54
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	5e-53
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	7e-52
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-49
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-37
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-32
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-20
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	4e-08
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-63
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-51
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-49
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	4e-49
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-47
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-30
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-30
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-29
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-12
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-60
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-47
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-47
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	5e-42
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-41
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-35
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-22
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-19
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-09
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-59
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-50
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-48
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-46
3v30_A	172	DNA-binding protein rfxank; structural genomics co	4e-43
3v30_A	172	DNA-binding protein rfxank; structural genomics co	7e-35
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-32
3v30_A	172	DNA-binding protein rfxank; structural genomics co	4e-25
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-08
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-59
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-55
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-54
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-54
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	7e-48
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-46
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	1e-43
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-41
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	1e-39
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-18
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-16
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-09
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	8e-59
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-58
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-57
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-50
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	9e-47
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-43
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-30
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-21
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	8e-59
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-57
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	4e-56
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-48
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-46
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	7e-45
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	3e-44
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	6e-43
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-37
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-32
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	8e-59
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	8e-59
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-57
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-54
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	6e-54
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	7e-50
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-32
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	6e-05
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	8e-58
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-49
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-48
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	5e-48
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	5e-44
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	3e-43
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-55
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-51
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-51
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-51
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-47
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-38
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-32
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	4e-55
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-42
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-42
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-39
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-37
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-20
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-07
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-05
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-52
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-50
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	6e-48
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	8e-48
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-45
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-42
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	4e-36
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-31
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-25
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	5e-14
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-52
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-44
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	3e-40
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	5e-38
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-36
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	5e-35
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-28
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	6e-22
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-14
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	3e-52
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-49
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	5e-49
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	7e-48
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	5e-43
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-39
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	3e-25
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	9e-12
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-09
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	9e-06
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	4e-52
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	9e-47
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	4e-40
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-39
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	2e-39
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	3e-32
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	2e-26
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	4e-14
3hra_A	201	Ankyrin repeat family protein; structural protein;	7e-52
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-51
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-46
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-36
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-30
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-30
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-27
3hra_A	201	Ankyrin repeat family protein; structural protein;	6e-12
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-04
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-51
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	4e-46
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	4e-46
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-40
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-37
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-34
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	5e-33
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-29
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-23
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	9e-08
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	6e-51
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	9e-39
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-35
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	8e-34
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	3e-31
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	8e-30
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	8e-28
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	4e-26
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	8e-51
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	7e-38
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-35
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	6e-32
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-29
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	5e-26
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	8e-25
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	3e-22
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	5e-18
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	3e-09
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-06
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	6e-50
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-40
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	3e-39
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	8e-37
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-31
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-30
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	6e-29
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	8e-28
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-04
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-49
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-47
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	5e-47
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-41
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-41
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	5e-35
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-33
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-32
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-49
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-47
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-46
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	5e-36
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-33
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	7e-31
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	5e-22
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-20
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-49
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	9e-46
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-43
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	7e-36
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-35
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	7e-35
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	5e-29
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-22
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-20
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-13
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-12
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-49
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-38
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	7e-37
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-33
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-28
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	6e-27
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-19
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-16
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-47
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	6e-47
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-36
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	8e-36
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-31
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-28
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	5e-28
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-21
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-19
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-47
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	5e-38
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-37
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	9e-36
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	7e-34
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	6e-32
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	7e-26
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	5e-25
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	9e-21
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-13
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-46
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-38
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-35
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	5e-35
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	6e-32
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-31
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	7e-28
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-23
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	4e-12
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	1e-46
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	9e-46
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	6e-42
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	1e-40
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	1e-38
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	6e-37
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	3e-34
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	8e-30
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	6e-28
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-08
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	4e-45
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-43
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	3e-42
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-39
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	4e-39
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-38
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-36
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	4e-28
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-27
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	5e-45
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	2e-40
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-35
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	8e-32
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	6e-30
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-29
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	9e-28
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	9e-26
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	2e-15
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-12
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	1e-43
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-40
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	1e-39
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	1e-36
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	6e-36
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-32
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-30
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	4e-26
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	8e-21
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	8e-07
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-41
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-41
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-36
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	8e-33
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-30
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-28
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-28
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-26
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-17
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	7e-14
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-07
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-41
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-31
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	6e-28
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-22
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-22
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-22
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	6e-18
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-17
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	4e-41
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	8e-38
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	7e-36
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-28
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	3e-27
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	7e-25
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	2e-20
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	6e-18
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-40
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-39
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-34
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	9e-34
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-27
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-27
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	7e-22
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-19
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	5e-15
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-12
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-07
2rfa_A	232	Transient receptor potential cation channel subfa	6e-39
2rfa_A	232	Transient receptor potential cation channel subfa	8e-39
2rfa_A	232	Transient receptor potential cation channel subfa	2e-38
2rfa_A	232	Transient receptor potential cation channel subfa	2e-33
2rfa_A	232	Transient receptor potential cation channel subfa	6e-31
2rfa_A	232	Transient receptor potential cation channel subfa	6e-30
2rfa_A	232	Transient receptor potential cation channel subfa	9e-30
2rfa_A	232	Transient receptor potential cation channel subfa	1e-26
2rfa_A	232	Transient receptor potential cation channel subfa	5e-20
2rfa_A	232	Transient receptor potential cation channel subfa	8e-05
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-38
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	6e-35
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-33
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-29
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	5e-29
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-26
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-20
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-17
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-13
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	7e-13
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	7e-13
2etb_A	256	Transient receptor potential cation channel subfam	1e-37
2etb_A	256	Transient receptor potential cation channel subfam	1e-27
2etb_A	256	Transient receptor potential cation channel subfam	5e-27
2etb_A	256	Transient receptor potential cation channel subfam	5e-25
2etb_A	256	Transient receptor potential cation channel subfam	4e-24
2etb_A	256	Transient receptor potential cation channel subfam	4e-16
2etb_A	256	Transient receptor potential cation channel subfam	2e-09
2etb_A	256	Transient receptor potential cation channel subfam	3e-07
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-34
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-33
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-32
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-30
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	3e-24
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	3e-22
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	4e-21
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-20
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	4e-17
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-14
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	3e-10
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	8e-32
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-30
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-28
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-28
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-22
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	7e-19
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-17
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	7e-17
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-14
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-13
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-07
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-07
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	4e-05
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	9e-04
2pnn_A	273	Transient receptor potential cation channel subfa	4e-31
2pnn_A	273	Transient receptor potential cation channel subfa	2e-30
2pnn_A	273	Transient receptor potential cation channel subfa	4e-29
2pnn_A	273	Transient receptor potential cation channel subfa	1e-20
2pnn_A	273	Transient receptor potential cation channel subfa	1e-19
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	4e-31
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-30
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	8e-29
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-28
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-26
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	5e-21
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-20
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-16
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	7e-15
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-13
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-11
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	9e-11
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-10
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-27
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-27
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	3e-25
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	7e-24
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-17
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-14
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	4e-13
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-26
3jxi_A	260	Vanilloid receptor-related osmotically activated p	3e-26
3jxi_A	260	Vanilloid receptor-related osmotically activated p	4e-24
3jxi_A	260	Vanilloid receptor-related osmotically activated p	3e-21
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-20
3jxi_A	260	Vanilloid receptor-related osmotically activated p	4e-17
3jxi_A	260	Vanilloid receptor-related osmotically activated p	4e-11
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	8e-15
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	2e-13
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-13
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	1e-12
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	2e-11
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-10
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	1e-08
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	6e-08
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	5e-07
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-14
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-13
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	4e-13
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	6e-12
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	3e-11
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-09
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	9e-08
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-06
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-06
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	7e-06
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	4e-13
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	9e-13
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-12
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	1e-11
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	7e-11
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	5e-09
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	2e-07
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	2e-07
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	9e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-13
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	6e-10
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	6e-09
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	3e-08
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-07
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	4e-07
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-06
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	4e-06

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  338 bits (870), Expect = e-110
 Identities = 112/441 (25%), Positives = 179/441 (40%), Gaps = 41/441 (9%)

Query: 179 RGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDT 238
            G           +PL  A+  G+  +   LL  GA     ++   +PL  A+  GHT+ 
Sbjct: 3   PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEV 62

Query: 239 VALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWAC 298
              LL   A VNA      + L  AA  G+T +V LL++  A  N+     G TPL  A 
Sbjct: 63  AKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATT-AGHTPLHIAA 121

Query: 299 RKGHVEIVDILLKAGANVDVAGLWAYMPLYSSAL--------------ADI-FSEPGLAT 343
           R+GHVE V  LL+  A+        + PL+ +A               A    +     T
Sbjct: 122 REGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLT 181

Query: 344 PLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWA 403
           PL V       +          + +K    +G  P                 G TPL  A
Sbjct: 182 PLHVA--VHHNN---------LDIVKLLLPRGGSPHSPA-----------WNGYTPLHIA 219

Query: 404 CRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGC 463
            ++  VE+   LL+ G + +   +   TPL +A      E+V LLL  + N N  +K G 
Sbjct: 220 AKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGL 279

Query: 464 TALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDI 523
           T L +  ++G+  +A +L+  G  ++   R G + L  A   G+  +V+ LL+   DV+ 
Sbjct: 280 TPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNA 339

Query: 524 PGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQML--- 580
             K   + ++ A ++G+  I+ LLL         + DG TPL  A +   +    +L   
Sbjct: 340 KTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVV 399

Query: 581 IDKKAKITAVDKRGDTVLHIA 601
            D+ + +   DK   +     
Sbjct: 400 TDETSFVLVSDKHRMSFPETV 420

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  336 bits (864), Expect = e-109
 Identities = 107/440 (24%), Positives = 173/440 (39%), Gaps = 53/440 (12%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
           +  +    T L  AA+ G     + L+   A VNA+  D+ +PL  AAR G+T++   LL
Sbjct: 41  NVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLL 100

Query: 211 DHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTE 270
           ++ A+       G +PL  A+ +GH +TV  LL+K A          + L  AA  G   
Sbjct: 101 ENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVR 160

Query: 271 IVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSS 330
           +  LL+++ A  N   K  G TPL  A    +++IV +LL  G +        Y      
Sbjct: 161 VAELLLERDAHPNAAGK-NGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGY------ 213

Query: 331 ALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLV 390
                       TPL +   AK             E  +   + G               
Sbjct: 214 ------------TPLHIA--AKQNQ---------VEVARSLLQYGGSANAE--------- 241

Query: 391 MHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLE 450
                G TPL  A ++GH E+V +LL   AN ++      TPL +        V ++L++
Sbjct: 242 --SVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIK 299

Query: 451 YKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGI 510
           +   V+A  + G T L +A   G  ++   LL   A +N + + G S L  A + GH  I
Sbjct: 300 HGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDI 359

Query: 511 VEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTA---NPDLEIATKDGDTPLLK 567
           V  LLK     +    +  T +  A   G + +  +L         + ++ K   +    
Sbjct: 360 VTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSF--- 416

Query: 568 AVKTRNLEAIQMLIDKKAKI 587
                  E +  ++D     
Sbjct: 417 ------PETVDEILDVSEDE 430

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  328 bits (844), Expect = e-106
 Identities = 116/425 (27%), Positives = 181/425 (42%), Gaps = 44/425 (10%)

Query: 212 HGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEI 271
            G         G +PL  AS+ GH   V  LL + A  N       + L  AA  G+TE+
Sbjct: 3   PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEV 62

Query: 272 VALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSA 331
              L++  AKVN   K    TPL  A R GH  +V +LL+  AN ++A    + PL+   
Sbjct: 63  AKYLLQNKAKVNAKAK-DDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLH--- 118

Query: 332 LADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVM 391
                    +A        A+ G           E +     +                 
Sbjct: 119 ---------IA--------AREGH---------VETVLALLEKEASQACMTK-------- 144

Query: 392 HLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEY 451
               G TPL  A + G V + ++LL+  A+ + AG    TPL VA   N  ++V+LLL  
Sbjct: 145 ---KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR 201

Query: 452 KPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIV 511
             + ++   +G T L IA K    E+A  LL  G   N +   G + L  A + GH  +V
Sbjct: 202 GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMV 261

Query: 512 EALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKT 571
             LL K  + ++  K   T ++   ++G+VP+  +L+     ++  T+ G TPL  A   
Sbjct: 262 ALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHY 321

Query: 572 RNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGE 631
            N++ ++ L+  +A + A  K G + LH A +     IV + +   KN       +  G 
Sbjct: 322 GNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLL---KNGASPNEVSSDGT 378

Query: 632 TPYSI 636
           TP +I
Sbjct: 379 TPLAI 383

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  280 bits (718), Expect = 7e-88
 Identities = 115/485 (23%), Positives = 189/485 (38%), Gaps = 72/485 (14%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
               SG + L  A   GH  IV+ LL++    ++     K+   L++          + L
Sbjct: 9   GGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNV--KVETPLHMAARAGHTEVAKYL 66

Query: 69  LDK--NKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRT 126
           L      +   K+ +T ++ A   G+  ++KLLL  N +  +AT           L    
Sbjct: 67  LQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATT-----AGHTPL---- 117

Query: 127 LQSYIA--EDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVN 184
              +IA  E +++++   LE + +        G T L  AA+ GK+     L+ R A  N
Sbjct: 118 ---HIAAREGHVETVLALLEKEASQ-ACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPN 173

Query: 185 AEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLD 244
           A   +  +PL  A      D+   LL  G         G++PL  A+ +   +    LL 
Sbjct: 174 AAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQ 233

Query: 245 KNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVE 304
                NA     ++ L  AA  G+ E+VALL+ K A  N+G+K  G TPL    ++GHV 
Sbjct: 234 YGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNK-SGLTPLHLVAQEGHVP 292

Query: 305 IVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKL 364
           + D+L+K G  VD      Y PL+ +                    + +G+         
Sbjct: 293 VADVLIKHGVMVDATTRMGYTPLHVA--------------------SHYGN--------- 323

Query: 365 KEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDV 424
            + +K   +   D                  G +PL  A ++GH +IV +LLK GA+ + 
Sbjct: 324 IKLVKFLLQHQADVNAKTK-----------LGYSPLHQAAQQGHTDIVTLLLKNGASPNE 372

Query: 425 AGLYCWTPLLVATLGNFTEVVELL---LEYKPNVNALDKDGCTALTIACKDGYYEIAVLL 481
                 TPL +A    +  V ++L    +    V   DK   +           E    +
Sbjct: 373 VSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFP---------ETVDEI 423

Query: 482 LNSGA 486
           L+   
Sbjct: 424 LDVSE 428

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  240 bits (614), Expect = 1e-72
 Identities = 98/456 (21%), Positives = 172/456 (37%), Gaps = 72/456 (15%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
             +   ++ L  A + GH  + + LL+    V+   K  +    L+        +  + L
Sbjct: 42  VSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQT--PLHCAARIGHTNMVKLL 99

Query: 69  LDK--NKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRT 126
           L+   N + +     T ++ A  +G+V  +  LL         TK          L    
Sbjct: 100 LENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTK-----KGFTPL---- 150

Query: 127 LQSYIA--EDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVN 184
              ++A     +   +  LE      +    NG T L  A     L  V+ L+ RG   +
Sbjct: 151 ---HVAAKYGKVRVAELLLERDAHP-NAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPH 206

Query: 185 AEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLD 244
           +   + ++PL  AA++   +V   LL +G       + G +PL  A+ +GH + VALLL 
Sbjct: 207 SPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLS 266

Query: 245 KNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVE 304
           K A+ N      ++ L   A  G+  +  +L+K G  V+   +  G TPL  A   G+++
Sbjct: 267 KQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTR-MGYTPLHVASHYGNIK 325

Query: 305 IVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKL 364
           +V  LL+  A+V+      Y PL+    A                 A+ G          
Sbjct: 326 LVKFLLQHQADVNAKTKLGYSPLH---QA-----------------AQQGH--------- 356

Query: 365 KEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDIL---LKAGAN 421
            + +    + G  P               S GTTPL  A R G++ + D+L       + 
Sbjct: 357 TDIVTLLLKNGASPN-----------EVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSF 405

Query: 422 VDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNA 457
           V V+  +  +           E V+ +L+   +   
Sbjct: 406 VLVSDKHRMSFP---------ETVDEILDVSEDEGE 432

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  217 bits (555), Expect = 4e-64
 Identities = 68/239 (28%), Positives = 112/239 (46%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            G TPL  A    +++IV +LL  G +        +TPL +A   N  EV   LL+Y  +
Sbjct: 178 NGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS 237

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
            NA    G T L +A ++G+ E+  LLL+  A  N+ ++SG + L    + GH  + + L
Sbjct: 238 ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVL 297

Query: 515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
           +K  V VD   +   T ++ A   GN+ ++K LL    D+   TK G +PL +A +  + 
Sbjct: 298 IKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHT 357

Query: 575 EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP 633
           + + +L+   A    V   G T L IA R    ++ +V          +   +K   + 
Sbjct: 358 DIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSF 416

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  207 bits (529), Expect = 2e-60
 Identities = 60/181 (33%), Positives = 90/181 (49%), Gaps = 1/181 (0%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
               ++G T L  A+  G L  V+ L+ RGA  N  +    +PL  AAR G+T+V   LL
Sbjct: 8   GGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLL 67

Query: 211 DHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTE 270
            + A +  +     +PL  A+  GHT+ V LLL+ NA+ N       + L  AA  G+ E
Sbjct: 68  QNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVE 127

Query: 271 IVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSS 330
            V  L++K A      K  G TPL  A + G V + ++LL+  A+ + AG     PL+ +
Sbjct: 128 TVLALLEKEASQACMTK-KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVA 186

Query: 331 A 331
            
Sbjct: 187 V 187

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 84.1 bits (209), Expect = 2e-17
 Identities = 41/218 (18%), Positives = 71/218 (32%), Gaps = 27/218 (12%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
                G + L  A + GH  +V  LL K  + ++  K       L++            L
Sbjct: 240 AESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLT--PLHLVAQEGHVPVADVL 297

Query: 69  LDK--NKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRT 126
           +        + +   T ++ A   GN+ ++K LL    D+   TK          L    
Sbjct: 298 IKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTK-----LGYSPLHQAA 352

Query: 127 LQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTR---GADV 183
            Q      + D +   L+N  +  ++   +G T L  A + G +S    L       + V
Sbjct: 353 QQ-----GHTDIVTLLLKNGASP-NEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFV 406

Query: 184 NAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDM 221
              D    S           +   E+LD   D     +
Sbjct: 407 LVSDKHRMSFP---------ETVDEILDVSEDEGEELI 435

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  269 bits (690), Expect = 7e-85
 Identities = 86/394 (21%), Positives = 143/394 (36%), Gaps = 64/394 (16%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRE-LVTRGADVNAEDNDNWSPLTYAAREGYTDVCAEL 209
               +     L+ AA+ G    +   L     + +A D    +PL  AA      +   L
Sbjct: 18  VLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLL 77

Query: 210 LDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYT 269
           L HGAD+  +D GG  PL  A   GH +   LLL   A VNA   +  + L  AA +   
Sbjct: 78  LQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRV 137

Query: 270 EIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYS 329
           E+ +LL+  GA   + +  +G + +  A      E +    K  +            L +
Sbjct: 138 EVCSLLLSHGADPTLVNC-HGKSAVDMAPTPELRERLTYEFKGHS-----------LLQA 185

Query: 330 SALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVL 389
           +  AD+                               ++K      +             
Sbjct: 186 AREADL------------------------------AKVKKTLALEIIN----------- 204

Query: 390 VMHLSYGTTPLVWACRKGH---VEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVE 446
                   T L  A    H    ++ ++LL+ GANV+       TPL VA      +V+E
Sbjct: 205 FKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVME 264

Query: 447 LLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGG 506
           +L ++   +NALD  G TAL  A   G+ +   LLL+ G+  +I    G +      +  
Sbjct: 265 VLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNE-- 322

Query: 507 HRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGN 540
               V+ +L +   +     + +     A + G+
Sbjct: 323 ---AVQQILSESTPMRTSDVDYRL--LEASKAGD 351

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  265 bits (681), Expect = 1e-83
 Identities = 92/402 (22%), Positives = 133/402 (33%), Gaps = 64/402 (15%)

Query: 173 VRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL-DHGADLEHRDMGGWSPLMWAS 231
             +L    A            L  AAR G  +    LL     +    D    +PL  A+
Sbjct: 7   ALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAA 66

Query: 232 YKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGT 291
                  V LLL   ADV+A     +  L  A   G+ E+  LL+K GA VN  D  +  
Sbjct: 67  GYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDL-WQF 125

Query: 292 TPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYA 351
           TPL  A  K  VE+  +LL  GA+  +        +  +                     
Sbjct: 126 TPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAP-------------------- 165

Query: 352 KWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEI 411
                            +  E                 + +   G + L  A R+  +  
Sbjct: 166 ---------------TPELRE----------------RLTYEFKGHSLL-QAAREADLAK 193

Query: 412 VDILLKAGANVDVAGLYCWTPLLVATL---GNFTEVVELLLEYKPNVNALDKDGCTALTI 468
           V   L              T L  A         +V ELLL    NVN  +KD  T L +
Sbjct: 194 VKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHV 253

Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER 528
           A +  + ++  +L   GA +N  D  G + L  A   GH      LL    D  I   + 
Sbjct: 254 AAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQG 313

Query: 529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVK 570
            TA     E      ++ +L+ +  +   T D D  LL+A K
Sbjct: 314 FTAAQMGNE-----AVQQILSESTPMR--TSDVDYRLLEASK 348

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  181 bits (462), Expect = 9e-52
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 24/231 (10%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            G  PL  AC  GH E+ ++LLK GA V+   L+ +TPL  A   N  EV  LLL +  +
Sbjct: 90  GGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGAD 149

Query: 455 VNALDKDGCTALTIACKDGYYEIA---------------------VLLLNSGAYINIQDR 493
              ++  G +A+ +A      E                          L        Q +
Sbjct: 150 PTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQ 209

Query: 494 SGDSNLIHAVKGGHRG---IVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTA 550
           S ++ L  AV   H     + E LL+K  +V+   K+  T ++ A E+ +  ++++L   
Sbjct: 210 SHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKH 269

Query: 551 NPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIA 601
              +      G T L +A    +L+  ++L+   +  + +  +G T   + 
Sbjct: 270 GAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG 320

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  177 bits (451), Expect = 3e-50
 Identities = 60/247 (24%), Positives = 97/247 (39%), Gaps = 25/247 (10%)

Query: 395 YGTTPLVWACRKGHV-EIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKP 453
           Y    L+ A R G+  +++ +L     N   +     TPL +A   N   +V+LLL++  
Sbjct: 23  YKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGA 82

Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEA 513
           +V+A DK G   L  AC  G+YE+  LLL  GA +N  D    + L  A       +   
Sbjct: 83  DVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSL 142

Query: 514 LLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIA---------------- 557
           LL    D  +     K+AV  A        L      +  L+ A                
Sbjct: 143 LLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEI 202

Query: 558 -----TKDGDTPLLKAVK---TRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTI 609
                 +  +T L  AV     +  +  ++L+ K A +   +K   T LH+A       +
Sbjct: 203 INFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDV 262

Query: 610 VEVFIRN 616
           +EV  ++
Sbjct: 263 MEVLHKH 269

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  176 bits (450), Expect = 5e-50
 Identities = 64/336 (19%), Positives = 107/336 (31%), Gaps = 74/336 (22%)

Query: 10  RDRSGDSNLIH-AVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
                   L+  A  G    ++  L    V+                           + 
Sbjct: 20  TGEYKKDELLEAARSGNEEKLMALLTPLNVNC--------------------------HA 53

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQ 128
            D  K        T ++ A     V I++LLL    D+    K       +V L      
Sbjct: 54  SDGRK-------STPLHLAAGYNRVRIVQLLLQHGADVHAKDK-----GGLVPL------ 95

Query: 129 SYIA--EDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAE 186
            + A    + +  +  L++   V +  D    T L  AA K ++     L++ GAD    
Sbjct: 96  -HNACSYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLV 153

Query: 187 DNDNWSPLTYAAREGYTDVC---------------------AELLDHGADLEHRDMGGWS 225
           +    S +  A      +                        + L        +     +
Sbjct: 154 NCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHET 213

Query: 226 PLMWASYKGH---TDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKV 282
            L  A    H        LLL K A+VN      ++ L  AA R + +++ +L K GAK+
Sbjct: 214 ALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKM 273

Query: 283 NVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDV 318
           N  D   G T L  A   GH++   +LL  G++  +
Sbjct: 274 NALDS-LGQTALHRAALAGHLQTCRLLLSYGSDPSI 308

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  168 bits (429), Expect = 4e-47
 Identities = 59/319 (18%), Positives = 111/319 (34%), Gaps = 42/319 (13%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIP---GKVRKLSDALNVTDANDQRSTT 65
             D    + L  A       IV+ LL+   DV      G V      L+   +      T
Sbjct: 53  ASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLV-----PLHNACSYGHYEVT 107

Query: 66  RNLLDK--NKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLC 123
             LL      +     + T ++ A  K  V +  LLL+   D  +            ++ 
Sbjct: 108 ELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNC-----HGKSAV- 161

Query: 124 YRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADV 183
                  +A           E +  +  +     G +L+ AA++  L+ V++ +      
Sbjct: 162 ------DMAPTP--------ELRERLTYEFK---GHSLLQAAREADLAKVKKTLALEIIN 204

Query: 184 NAEDNDNWSPLTYAAREGY---TDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVA 240
             +   + + L  A    +     V   LL  GA++  ++    +PL  A+ + H D + 
Sbjct: 205 FKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVME 264

Query: 241 LLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRK 300
           +L    A +NA  +   ++L  AA  G+ +   LL+  G+  ++     G T        
Sbjct: 265 VLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISL-QGFTAAQMG--- 320

Query: 301 GHVEIVDILLKAGANVDVA 319
              E V  +L     +  +
Sbjct: 321 --NEAVQQILSESTPMRTS 337

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  160 bits (407), Expect = 5e-44
 Identities = 53/227 (23%), Positives = 88/227 (38%), Gaps = 25/227 (11%)

Query: 415 LLKAGANVDVAGLYCWTPLLV-ATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDG 473
           L    A   + G Y    LL  A  GN  +++ LL     N +A D    T L +A    
Sbjct: 10  LADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYN 69

Query: 474 YYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVY 533
              I  LLL  GA ++ +D+ G   L +A   GH  + E LLK    V+     + T ++
Sbjct: 70  RVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLH 129

Query: 534 TAVEKGNVPILKLLLTANPDLEIATKDGDTPL---------------------LKAVKTR 572
            A  K  V +  LLL+   D  +    G + +                     L+A +  
Sbjct: 130 EAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREA 189

Query: 573 NLEAIQMLIDKKAKITAVDKRGDTVLHIAMR---ARSKTIVEVFIRN 616
           +L  ++  +  +       +  +T LH A+     + K + E+ +R 
Sbjct: 190 DLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRK 236

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  143 bits (363), Expect = 6e-38
 Identities = 43/210 (20%), Positives = 79/210 (37%), Gaps = 22/210 (10%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           +G + +  A      E +    K             + L  A   +  +V + L   +  
Sbjct: 156 HGKSAVDMAPTPELRERLTYEFKGH-----------SLLQAAREADLAKVKKTLAL-EII 203

Query: 455 VNALDKDGCTALTIACKDGYY---EIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIV 511
                +   TAL  A    +    ++A LLL  GA +N +++   + L  A +  H  ++
Sbjct: 204 NFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVM 263

Query: 512 EALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKT 571
           E L K    ++      +TA++ A   G++   +LLL+   D  I +  G T        
Sbjct: 264 EVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN-- 321

Query: 572 RNLEAIQMLIDKKAKITAVDKRGDTVLHIA 601
              EA+Q ++ +   +   D   D  L  A
Sbjct: 322 ---EAVQQILSESTPMRTSDV--DYRLLEA 346

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 85.6 bits (213), Expect = 4e-18
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 2/83 (2%)

Query: 238 TVALLLDKNADVNAHGNYHISSLIWAAGRG-YTEIVALLVKKGAKVNVGDKVYGTTPLVW 296
           +   L D +A     G Y    L+ AA  G   +++ALL       +  D    +TPL  
Sbjct: 6   SALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDG-RKSTPLHL 64

Query: 297 ACRKGHVEIVDILLKAGANVDVA 319
           A     V IV +LL+ GA+V   
Sbjct: 65  AAGYNRVRIVQLLLQHGADVHAK 87

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 49.0 bits (118), Expect = 2e-06
 Identities = 7/50 (14%), Positives = 15/50 (30%)

Query: 268 YTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
           + +    L    AK  +  +      L  A      +++ +L     N  
Sbjct: 3   FGKSALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCH 52

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  258 bits (661), Expect = 2e-80
 Identities = 71/428 (16%), Positives = 126/428 (29%), Gaps = 80/428 (18%)

Query: 180 GADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTV 239
             +    D++N   +  AAR+G TD    L++ G     ++  G + L  A   G  DT 
Sbjct: 10  KLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTA 69

Query: 240 ALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACR 299
             L       +         +  A     T++V  LV+   +        G  P      
Sbjct: 70  KYLASVGEVHSLWHGQ--KPIHLAVMANKTDLVVALVEGAKE-------RGQMPESLLNE 120

Query: 300 KGHVEIVDILLKAGANV-DVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKS 358
               E+     + G++V    G                      T L    +        
Sbjct: 121 CDEREVN----EIGSHVKHCKGQ---------------------TAL---HWC------V 146

Query: 359 FLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILL-- 416
            L P+  E +K   + G  PT                  TPL+ A    + E +D+++  
Sbjct: 147 GLGPEYLEMIKILVQLGASPTAKDK-----------ADETPLMRAMEFRNREALDLMMDT 195

Query: 417 ---KAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDG 473
              K+   +D A     + L  A L N+ +V    +E   +VN  D +    L ++ +  
Sbjct: 196 VPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAA 255

Query: 474 YYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVY 533
              +   LL       IQ                             V          V 
Sbjct: 256 MVLLTKELLQKTDVFLIQA--------------------CPYHNGTTVLPDRVVWLDFVP 295

Query: 534 TAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKR 593
            A +     +L+LL     ++  +   G    +K  K       +M +   A +    + 
Sbjct: 296 AAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRS 355

Query: 594 GDTVLHIA 601
                 ++
Sbjct: 356 RARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  208 bits (533), Expect = 8e-62
 Identities = 55/419 (13%), Positives = 116/419 (27%), Gaps = 75/419 (17%)

Query: 67  NLLDK---NKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLC 123
           ++ D    N+ KS  E    ++ A  KG    ++ L+       I  +         +L 
Sbjct: 4   SMTDFPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNR-----FGCTAL- 57

Query: 124 YRTLQSYIA--EDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGA 181
                 ++A     +D+ +               +G   +  A    K   V  LV    
Sbjct: 58  ------HLACKFGCVDTAKYLASVG---EVHSLWHGQKPIHLAVMANKTDLVVALVEGAK 108

Query: 182 DVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKG--HTDTV 239
                      P +        +V      +      +   G + L W    G  + + +
Sbjct: 109 ------ERGQMPESLLNECDEREV------NEIGSHVKHCKGQTALHWCVGLGPEYLEMI 156

Query: 240 ALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLV-----KKGAKVNVGDKVYGTTPL 294
            +L+   A   A      + L+ A      E + L++     K   +++  +K  G + L
Sbjct: 157 KILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANK-QGNSHL 215

Query: 295 VWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWG 354
            WA      ++    ++ G +V++      +PLY            L+         +  
Sbjct: 216 HWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLY------------LS--------VRAA 255

Query: 355 SGK--SFLLPK--LKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVE 410
                  LL K  +          G              +         +  A      E
Sbjct: 256 MVLLTKELLQKTDVFLIQACPYHNGTTV-----------LPDRVVWLDFVPAAADPSKQE 304

Query: 411 IVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIA 469
           ++ +L +    V  +        +         V  + L     V    +    +  ++
Sbjct: 305 VLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  190 bits (485), Expect = 6e-55
 Identities = 54/347 (15%), Positives = 98/347 (28%), Gaps = 54/347 (15%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
           K D      +  A + G    V  L++  V   I  +      AL++        T + L
Sbjct: 15  KSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCT--ALHLACKFGCVDTAKYL 72

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQ 128
               +  SL   +  ++ AV      ++  L+                            
Sbjct: 73  ASVGEVHSLWHGQKPIHLAVMANKTDLVVALV---------------------------- 104

Query: 129 SYIAEDNLDSLQTFLEN--KRTV---ADDRDDNGGTALMFAAQKGKLSF--VRELVTRGA 181
               E          E   +      +  +   G TAL +    G      ++ LV  GA
Sbjct: 105 EGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGA 164

Query: 182 DVNAEDNDNWSPLTYAAREGYTDVCAELLD-----HGADLEHRDMGGWSPLMWASYKGHT 236
              A+D  + +PL  A      +    ++D         L++ +  G S L WA      
Sbjct: 165 SPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWE 224

Query: 237 DTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGD---------- 286
           D     ++   DVN   N H   L  +       +   L++K     +            
Sbjct: 225 DVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVL 284

Query: 287 --KVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSA 331
             +V     +  A      E++ +L +    V  +            
Sbjct: 285 PDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRK 331

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  171 bits (437), Expect = 4e-48
 Identities = 42/247 (17%), Positives = 92/247 (37%), Gaps = 26/247 (10%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
                +  A RKG  + V  L++ G +  +   +  T L +A      +  + L      
Sbjct: 19  ENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEV 78

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
            +     G   + +A      ++ V L+            G        +   R + E  
Sbjct: 79  HS--LWHGQKPIHLAVMANKTDLVVALVEGAK------ERGQMPESLLNECDEREVNEI- 129

Query: 515 LKKYVDVDIPGKERKTAVYTAVEKGN--VPILKLLLTANPDLEIATKDGDTPLLKAVKTR 572
                   +   + +TA++  V  G   + ++K+L+          K  +TPL++A++ R
Sbjct: 130 -----GSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFR 184

Query: 573 NLEAIQMLID-----KKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKN-NILLYRP 626
           N EA+ +++D        ++   +K+G++ LH A+    + +   F+    + N+     
Sbjct: 185 NREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNM----E 240

Query: 627 NKAGETP 633
           +     P
Sbjct: 241 DNEHTVP 247

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  169 bits (430), Expect = 4e-47
 Identities = 44/254 (17%), Positives = 94/254 (37%), Gaps = 21/254 (8%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           +G T L  AC+ G V+    L   G    +   +   P+ +A + N T++V  L+E    
Sbjct: 52  FGCTALHLACKFGCVDTAKYLASVGEVHSLW--HGQKPIHLAVMANKTDLVVALVEGA-- 107

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGG--HRGIVE 512
                + G    ++  +    E+           +++   G + L   V  G  +  +++
Sbjct: 108 ----KERGQMPESLLNECDEREVN------EIGSHVKHCKGQTALHWCVGLGPEYLEMIK 157

Query: 513 ALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP-----DLEIATKDGDTPLLK 567
            L++         K  +T +  A+E  N   L L++   P      L+ A K G++ L  
Sbjct: 158 ILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHW 217

Query: 568 AVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPN 627
           A+     +     ++    +   D      L++++RA    + +  ++     ++   P 
Sbjct: 218 AILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPY 277

Query: 628 KAGETPYSIDMNNQ 641
             G T     +   
Sbjct: 278 HNGTTVLPDRVVWL 291

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  161 bits (410), Expect = 2e-44
 Identities = 36/242 (14%), Positives = 77/242 (31%), Gaps = 26/242 (10%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATL--GNFTEVVELLLEYK 452
            G  P          E+            V      T L         + E++++L++  
Sbjct: 110 RGQMPESLLNECDEREVN------EIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLG 163

Query: 453 PNVNALDKDGCTALTIACKDGYYEIAVLLLNS-----GAYINIQDRSGDSNLIHAVKGGH 507
            +  A DK   T L  A +    E   L++++        ++  ++ G+S+L  A+    
Sbjct: 164 ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINW 223

Query: 508 RGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEI----------- 556
             +    ++  +DV++   E    +Y +V    V + K LL       I           
Sbjct: 224 EDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTV 283

Query: 557 --ATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI 614
                     +  A      E +Q+L +K  ++      G        +  +  +  + +
Sbjct: 284 LPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKL 343

Query: 615 RN 616
             
Sbjct: 344 AP 345

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  155 bits (393), Expect = 5e-42
 Identities = 45/305 (14%), Positives = 89/305 (29%), Gaps = 46/305 (15%)

Query: 11  DRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLD 70
              G   +  AV      +V AL++   +              ++ +  D+R        
Sbjct: 81  LWHGQKPIHLAVMANKTDLVVALVEGAKERG--------QMPESLLNECDEREVNEIGSH 132

Query: 71  KNKHKSLKERKTAVYTAVEKGN--VPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQ 128
                   + +TA++  V  G   + ++K+L+          K          L      
Sbjct: 133 VKH----CKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDK-----ADETPL------ 177

Query: 129 SYIA--EDNLDSLQTFLENKRTVA----DDRDDNGGTALMFAAQKGKLSFVRELVTRGAD 182
              A    N ++L   ++   + +    D  +  G + L +A            V  G D
Sbjct: 178 -MRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGID 236

Query: 183 VNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE-------------HRDMGGWSPLMW 229
           VN EDN++  PL  + R     +  ELL                       +     +  
Sbjct: 237 VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPA 296

Query: 230 ASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVY 289
           A+     + + LL +K  +V    N      +    +    +  + +   A V    +  
Sbjct: 297 AADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSR-S 355

Query: 290 GTTPL 294
                
Sbjct: 356 RARSS 360

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  143 bits (364), Expect = 5e-38
 Identities = 49/224 (21%), Positives = 86/224 (38%), Gaps = 18/224 (8%)

Query: 414 ILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDG 473
           +      N   +       + VA     T+ V  L+E   +    ++ GCTAL +ACK G
Sbjct: 5   MTDFPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFG 64

Query: 474 YYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVY 533
             + A  L + G   ++    G   +  AV      +V AL++   +        +    
Sbjct: 65  CVDTAKYLASVGEVHSLWH--GQKPIHLAVMANKTDLVVALVEGAKERG------QMPES 116

Query: 534 TAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRN--LEAIQMLIDKKAKITAVD 591
              E     + ++         +    G T L   V      LE I++L+   A  TA D
Sbjct: 117 LLNECDEREVNEI------GSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKD 170

Query: 592 KRGDTVLHIAMRARSKTIVEVFI--RNPKNNILLYRPNKAGETP 633
           K  +T L  AM  R++  +++ +     K+++ L   NK G + 
Sbjct: 171 KADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSH 214

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  116 bits (294), Expect = 1e-28
 Identities = 34/269 (12%), Positives = 66/269 (24%), Gaps = 39/269 (14%)

Query: 8   SKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRK--LSDALNVTDANDQRSTT 65
                 G        +   R + E          +     +  L     V    +     
Sbjct: 105 EGAKERGQMPESLLNECDEREVNEI------GSHVKHCKGQTALHWC--VGLGPEYLEMI 156

Query: 66  RNLLDK--NKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLC 123
           + L+    +     K  +T +  A+E  N   L L++   P                 L 
Sbjct: 157 KILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHL- 215

Query: 124 YRTLQSYIA--EDNLDSLQTFLENKRTVAD--DRDDNGGTALMFAAQKGKLSFVRELVTR 179
                 + A   +  D    F+E      D    D+     L  + +   +   +EL+ +
Sbjct: 216 ------HWAILINWEDVAMRFVEMG---IDVNMEDNEHTVPLYLSVRAAMVLLTKELLQK 266

Query: 180 GA-------------DVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSP 226
                           V  +       +  AA     +V   L +   ++      G   
Sbjct: 267 TDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGG 326

Query: 227 LMWASYKGHTDTVALLLDKNADVNAHGNY 255
            +    K       + L  +A V      
Sbjct: 327 AVKRKKKAAPAVKRMKLAPSAPVRTRSRS 355

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 96.1 bits (240), Expect = 1e-21
 Identities = 26/227 (11%), Positives = 62/227 (27%), Gaps = 36/227 (15%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVD---VDIPGKVRKLSDALNVTDANDQRSTT 65
            +D++ ++ L+ A++  +R  ++ ++        + +    ++ +  L+     +     
Sbjct: 168 AKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVA 227

Query: 66  RNLLDK--NKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLC 123
              ++   + +    E    +Y +V    V + K LL                       
Sbjct: 228 MRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKT-------------------- 267

Query: 124 YRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADV 183
                     D          N  TV           +  AA   K   ++ L  +  +V
Sbjct: 268 ----------DVFLIQACPYHNGTTV-LPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEV 316

Query: 184 NAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWA 230
               N          ++    V    L   A +  R          +
Sbjct: 317 VRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSSAVS 363

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  233 bits (596), Expect = 9e-72
 Identities = 69/341 (20%), Positives = 124/341 (36%), Gaps = 50/341 (14%)

Query: 153 RDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDH 212
            D             G  + +   V +      + +D    L  A   G T+    LL+ 
Sbjct: 4   ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFL-AACSSGDTEEVLRLLER 62

Query: 213 GADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIV 272
           GAD+ + ++ G + L  A    + D V  L++  A++N   N     L  AA  GY +I 
Sbjct: 63  GADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIA 122

Query: 273 ALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILL-KAGANVDVAGLWAYMPLYSSA 331
             L+ +GA V   +   G TPL  A  +   E++   + + G +++ A       +    
Sbjct: 123 EYLISQGAHVGAVNS-EGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIM---- 177

Query: 332 LADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVM 391
                                           L++  +      ++            V 
Sbjct: 178 --------------------------------LRDARQWLNSGHIN-----------DVR 194

Query: 392 HLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEY 451
           H   G T L  A  KG+ E++ +L++A  +V++     WTPL  A      E   +L+E 
Sbjct: 195 HAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVEN 254

Query: 452 KPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
             ++ A++K G TA  +A +D    +  L        + + 
Sbjct: 255 LCDMEAVNKVGQTAFDVADEDILGYLEELQKKQNLLHSEKR 295

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  182 bits (464), Expect = 1e-52
 Identities = 68/340 (20%), Positives = 120/340 (35%), Gaps = 49/340 (14%)

Query: 282 VNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGL 341
           + + D              G    ++  +       V      + L              
Sbjct: 1   MKMADA-KQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLA------------- 46

Query: 342 ATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLV 401
                       G           EE+     +G D  +               G T L 
Sbjct: 47  --------ACSSGD---------TEEVLRLLERGADINYA-----------NVDGLTALH 78

Query: 402 WACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKD 461
            AC   +V++V  L++ GAN++      W PL  A    + ++ E L+    +V A++ +
Sbjct: 79  QACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSE 138

Query: 462 GCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDV 521
           G T L IA ++   E+          +N Q    ++      +   R   + L   +++ 
Sbjct: 139 GDTPLDIAEEEAMEELLQNE------VNRQGVDIEAARKEEERIMLRDARQWLNSGHIND 192

Query: 522 DIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLI 581
               K   TA++ A  KG   +LKLL+ A  D+ I   DG TPL  A      EA ++L+
Sbjct: 193 VRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILV 252

Query: 582 DKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI-RNPKNN 620
           +    + AV+K G T   +A       + E+   +N  ++
Sbjct: 253 ENLCDMEAVNKVGQTAFDVADEDILGYLEELQKKQNLLHS 292

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  174 bits (443), Expect = 1e-49
 Identities = 58/346 (16%), Positives = 111/346 (32%), Gaps = 61/346 (17%)

Query: 78  KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLD 137
            ++K         G+   L+  +      ++                    +  +  + +
Sbjct: 6   AKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDD-----------GAVFLAACSSGDTE 54

Query: 138 SLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYA 197
            +   LE    + +  + +G TAL  A     +  V+ LV  GA++N  DN+ W PL  A
Sbjct: 55  EVLRLLERGADI-NYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAA 113

Query: 198 AREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKN-ADVNAHGNYH 256
           A  GY D+   L+  GA +   +  G +PL  A  +   + +   +++   D+ A     
Sbjct: 114 ASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEA----- 168

Query: 257 ISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANV 316
             +          +    L           K  G T L  A  KG+ E++ +L++A  +V
Sbjct: 169 --ARKEEERIMLRDARQWLNSGHINDVRHAK-SGGTALHVAAAKGYTEVLKLLIQARYDV 225

Query: 317 DVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGV 376
           ++     + PL+++                    A WG          +E  +       
Sbjct: 226 NIKDYDGWTPLHAA--------------------AHWGK---------EEACRILVENLC 256

Query: 377 DPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANV 422
           D                  G T    A       + ++  K     
Sbjct: 257 DME-----------AVNKVGQTAFDVADEDILGYLEELQKKQNLLH 291

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  169 bits (430), Expect = 7e-48
 Identities = 58/258 (22%), Positives = 102/258 (39%), Gaps = 21/258 (8%)

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKP 453
             G   L  AC  G  E V  LL+ GA+++ A +   T L  A + +  ++V+ L+E   
Sbjct: 39  DDGAVFL-AACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGA 97

Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEA 513
           N+N  D +G   L  A   GY +IA  L++ GA++   +  GD+ L  A +     +++ 
Sbjct: 98  NINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQN 157

Query: 514 LLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRN 573
            + +   VDI     + A             + L + + +     K G T L  A     
Sbjct: 158 EVNR-QGVDI-----EAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGY 211

Query: 574 LEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIR-----NPKNNILLYRPNK 628
            E +++LI  +  +   D  G T LH A     +    + +         N         
Sbjct: 212 TEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNK-------- 263

Query: 629 AGETPYSI-DMNNQKSIL 645
            G+T + + D +    + 
Sbjct: 264 VGQTAFDVADEDILGYLE 281

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  149 bits (379), Expect = 9e-41
 Identities = 50/304 (16%), Positives = 90/304 (29%), Gaps = 61/304 (20%)

Query: 18  LIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSD---ALNVTDANDQRSTTRNLLDK--N 72
            + A   G    V  LL++  D++         D   AL+    +D     + L++   N
Sbjct: 44  FLAACSSGDTEEVLRLLERGADINYANV-----DGLTALHQACIDDNVDMVKFLVENGAN 98

Query: 73  KHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIA 132
            ++   E    ++ A   G + I + L++    +                          
Sbjct: 99  INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGA------------------------ 134

Query: 133 EDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWS 192
                                +  G T L  A ++     ++  V R         D  +
Sbjct: 135 --------------------VNSEGDTPLDIAEEEAMEELLQNEVNRQ------GVDIEA 168

Query: 193 PLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAH 252
                 R    D    L     +       G + L  A+ KG+T+ + LL+    DVN  
Sbjct: 169 ARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIK 228

Query: 253 GNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKA 312
                + L  AA  G  E   +LV+    +   +K  G T    A       + ++  K 
Sbjct: 229 DYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNK-VGQTAFDVADEDILGYLEELQKKQ 287

Query: 313 GANV 316
               
Sbjct: 288 NLLH 291

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  139 bits (353), Expect = 3e-37
 Identities = 37/200 (18%), Positives = 76/200 (38%), Gaps = 6/200 (3%)

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKP 453
           + G  PL  A   G+++I + L+  GA+V        TPL +A      E+++  +  + 
Sbjct: 104 NEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQ- 162

Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEA 513
                  D   A     +    +    L +         +SG + L  A   G+  +++ 
Sbjct: 163 -----GVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKL 217

Query: 514 LLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRN 573
           L++   DV+I   +  T ++ A   G     ++L+    D+E   K G T    A +   
Sbjct: 218 LIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDIL 277

Query: 574 LEAIQMLIDKKAKITAVDKR 593
               ++   +    +   ++
Sbjct: 278 GYLEELQKKQNLLHSEKREK 297

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  120 bits (303), Expect = 2e-30
 Identities = 36/184 (19%), Positives = 66/184 (35%), Gaps = 3/184 (1%)

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           +   D        +    G        +       ++   G    + A   G    V  L
Sbjct: 1   MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAV-FLAACSSGDTEEVLRL 59

Query: 515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
           L++  D++    +  TA++ A    NV ++K L+    ++     +G  PL  A     L
Sbjct: 60  LERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYL 119

Query: 575 EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPY 634
           +  + LI + A + AV+  GDT L IA     + +++  +     +I      K  E   
Sbjct: 120 DIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIE--AARKEEERIM 177

Query: 635 SIDM 638
             D 
Sbjct: 178 LRDA 181

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 99.1 bits (248), Expect = 4e-23
 Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 2/116 (1%)

Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
           ++  D           + G    +   + K        +   +  + A   G TE V  L
Sbjct: 1   MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDG-AVFLAACSSGDTEEVLRL 59

Query: 276 VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSA 331
           +++GA +N  +   G T L  AC   +V++V  L++ GAN++      ++PL+++A
Sbjct: 60  LERGADINYANV-DGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAA 114

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 65.6 bits (161), Expect = 9e-12
 Identities = 29/213 (13%), Positives = 52/213 (24%), Gaps = 77/213 (36%)

Query: 8   SKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRN 67
           +++    ++      +   R   + L   +++                            
Sbjct: 160 NRQGVDIEAARKEEERIMLRDARQWLNSGHINDVR------------------------- 194

Query: 68  LLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTL 127
                K        TA++ A  KG   +LKLL+ A  D+ I                   
Sbjct: 195 ---HAKS-----GGTALHVAAAKGYTEVLKLLIQARYDVNI------------------- 227

Query: 128 QSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAED 187
                                    +D +G T L  AA  GK    R LV    D+ A +
Sbjct: 228 -------------------------KDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVN 262

Query: 188 NDNWSPLTYAAREGYTDVCAELLDHGADLEHRD 220
               +    A  +    +             + 
Sbjct: 263 KVGQTAFDVADEDILGYLEELQKKQNLLHSEKR 295

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 45.6 bits (109), Expect = 2e-05
 Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 29/187 (15%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
             +  GD+ L  A +     +++  + +   VDI         A    +    R   + L
Sbjct: 134 AVNSEGDTPLDIAEEEAMEELLQNEVNR-QGVDIE-------AARKEEERIMLRDARQWL 185

Query: 69  LDK--NKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRT 126
                N  +  K   TA++ A  KG   +LKLL+ A  D+ I        D    L    
Sbjct: 186 NSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDY-----DGWTPL---- 236

Query: 127 LQSYIA--EDNLDSLQTFLENKRTVAD--DRDDNGGTALMFAAQKGKLSFVRELVTRGAD 182
              + A      ++ +  +EN     D    +  G TA   A +            +   
Sbjct: 237 ---HAAAHWGKEEACRILVENL---CDMEAVNKVGQTAFDVADEDILGYLEELQKKQNLL 290

Query: 183 VNAEDND 189
            + +   
Sbjct: 291 HSEKREK 297

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  221 bits (567), Expect = 9e-68
 Identities = 73/331 (22%), Positives = 119/331 (35%), Gaps = 56/331 (16%)

Query: 164 AAQKGKLSFVRELVTRGADVNAEDN-----DNWSPLTYAAREGYTDVCAELLDHGADLEH 218
            +          LV RG+ + + D      D   P       G       LL +    + 
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGI-----RLLSNPLMGDA 56

Query: 219 RDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKK 278
                WSP+  A+  GH  ++  L+ +   VN     H+S L  A   G+   V +L+K 
Sbjct: 57  VS--DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKH 114

Query: 279 GAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSE 338
           GA+VN        TPL  AC  G  + V++LL+ GA                    +  E
Sbjct: 115 GAQVNGVTA-DWHTPLFNACVSGSWDCVNLLLQHGA-------------------SVQPE 154

Query: 339 PGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTT 398
             LA+P+     A+ G           E +      G +               +S+  T
Sbjct: 155 SDLASPIHEA--ARRGH---------VECVNSLIAYGGNID-----------HKISHLGT 192

Query: 399 PLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNAL 458
           PL  AC       V  LL++GA+V+  G    +PL         E+  LL+++  +  A 
Sbjct: 193 PLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAK 251

Query: 459 DKDGCTALTIACKDGYYEIAVLLLNSGAYIN 489
           + +G   + +   +      + L   GA + 
Sbjct: 252 NAEGKRPVELVPPESP-LAQLFLEREGASLP 281

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  207 bits (530), Expect = 2e-62
 Identities = 70/324 (21%), Positives = 114/324 (35%), Gaps = 57/324 (17%)

Query: 197 AAREGYTDVCAELLDHGADLEHRDMG-----GWSPLMWASYKGHTDTVALLLDKNADVNA 251
            +   +    + L+  G+ +   D       G  P     + G       LL      +A
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGI-----RLLSNPLMGDA 56

Query: 252 HGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK 311
             ++  S +  AA  G+   +  L+ +G  VN+       +PL  AC  GH+  V ILLK
Sbjct: 57  VSDW--SPMHEAAIHGHQLSLRNLISQGWAVNIITA-DHVSPLHEACLGGHLSCVKILLK 113

Query: 312 AGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHF 371
            GA V+      + PL+             A           GS          + +   
Sbjct: 114 HGAQVNGVTADWHTPLF------------NA--------CVSGS---------WDCVNLL 144

Query: 372 ERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWT 431
            + G                  S   +P+  A R+GHVE V+ L+  G N+D    +  T
Sbjct: 145 LQHGASVQPE------------SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGT 192

Query: 432 PLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQ 491
           PL +A        V+ LLE   +VN   K   + L    +    E+A LL++ GA    +
Sbjct: 193 PLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAK 251

Query: 492 DRSGDSNLIHAVKGGHRGIVEALL 515
           +  G   +          + +  L
Sbjct: 252 NAEGKRPVELVPPESP--LAQLFL 273

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  194 bits (496), Expect = 2e-57
 Identities = 56/314 (17%), Positives = 97/314 (30%), Gaps = 55/314 (17%)

Query: 21  AVKGGHRGIVEALLKKYVDVDIPGKVRKLSD---ALNVTDANDQRSTTRNLLDKNKHKSL 77
                H      L+ +   +      +   D        D    R  +  L+        
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSD-- 59

Query: 78  KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLD 137
               + ++ A   G+   L+ L++    +                               
Sbjct: 60  ---WSPMHEAAIHGHQLSLRNLISQGWAV------------------------------- 85

Query: 138 SLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYA 197
                        +    +  + L  A   G LS V+ L+  GA VN    D  +PL  A
Sbjct: 86  -------------NIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNA 132

Query: 198 AREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHI 257
              G  D    LL HGA ++       SP+  A+ +GH + V  L+    +++   ++  
Sbjct: 133 CVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLG 191

Query: 258 SSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
           + L  A        V  L++ GA VN G      +PL    R    E+  +L+  GA+  
Sbjct: 192 TPLYLACENQQRACVKKLLESGADVNQGK--GQDSPLHAVVRTASEELACLLMDFGADTQ 249

Query: 318 VAGLWAYMPLYSSA 331
                   P+    
Sbjct: 250 AKNAEGKRPVELVP 263

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  192 bits (491), Expect = 9e-57
 Identities = 57/221 (25%), Positives = 91/221 (41%), Gaps = 3/221 (1%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
             +P+  A   GH   +  L+  G  V++      +PL  A LG     V++LL++   V
Sbjct: 59  DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV 118

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           N +  D  T L  AC  G ++   LLL  GA +  +     S +  A + GH   V +L+
Sbjct: 119 NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLI 177

Query: 516 KKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLE 575
               ++D       T +Y A E      +K LL +  D+    K  D+PL   V+T + E
Sbjct: 178 AYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVVRTASEE 236

Query: 576 AIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN 616
              +L+D  A   A +  G   + +     S        R 
Sbjct: 237 LACLLMDFGADTQAKNAEGKRPVELVPP-ESPLAQLFLERE 276

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  179 bits (458), Expect = 6e-52
 Identities = 55/311 (17%), Positives = 96/311 (30%), Gaps = 81/311 (26%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
               S  S +  A   GH+  +  L+ +   V             N+             
Sbjct: 54  GDAVSDWSPMHEAAIHGHQLSLRNLISQGWAV-------------NIIT----------- 89

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQ 128
                     +  + ++ A   G++  +K+LL     +                      
Sbjct: 90  ---------ADHVSPLHEACLGGHLSCVKILLKHGAQV---------------------- 118

Query: 129 SYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDN 188
                                 +    +  T L  A   G    V  L+  GA V   ++
Sbjct: 119 ----------------------NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ES 155

Query: 189 DNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNAD 248
           D  SP+  AAR G+ +    L+ +G +++H+     +PL  A        V  LL+  AD
Sbjct: 156 DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD 215

Query: 249 VNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDI 308
           VN  G    S L         E+  LL+  GA     +   G  P+     +  +  +  
Sbjct: 216 VNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNA-EGKRPVELVPPESPLAQL-F 272

Query: 309 LLKAGANVDVA 319
           L + GA++   
Sbjct: 273 LEREGASLPKP 283

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  167 bits (426), Expect = 2e-47
 Identities = 49/238 (20%), Positives = 88/238 (36%), Gaps = 12/238 (5%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G+ P       G       LL      D      W+P+  A +      +  L+     V
Sbjct: 33  GSKPAGPRDFPGIR-----LLSNPLMGDAVS--DWSPMHEAAIHGHQLSLRNLISQGWAV 85

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           N +  D  + L  AC  G+     +LL  GA +N       + L +A   G    V  LL
Sbjct: 86  NIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLL 145

Query: 516 KKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLE 575
           +    V  P  +  + ++ A  +G+V  +  L+    +++       TPL  A + +   
Sbjct: 146 QHGASVQ-PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA 204

Query: 576 AIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP 633
            ++ L++  A +    K  D+ LH  +R  S+ +  + +            N  G+ P
Sbjct: 205 CVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLM---DFGADTQAKNAEGKRP 258

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  164 bits (418), Expect = 2e-46
 Identities = 60/304 (19%), Positives = 105/304 (34%), Gaps = 38/304 (12%)

Query: 297 ACRKGHVEIVDILLKAGA-----NVDVAGLWAYMPLYSSALADIFSEPGLA--------T 343
                H      L+  G+     +    G+    P        I               +
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWS 61

Query: 344 PLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWA 403
           P+     A  G          +  +++   QG                  +   +PL  A
Sbjct: 62  PMHEA--AIHGH---------QLSLRNLISQGWAVNII-----------TADHVSPLHEA 99

Query: 404 CRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGC 463
           C  GH+  V ILLK GA V+       TPL  A +    + V LLL++  +V   + D  
Sbjct: 100 CLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLA 158

Query: 464 TALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDI 523
           + +  A + G+ E    L+  G  I+ +     + L  A +   R  V+ LL+   DV+ 
Sbjct: 159 SPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ 218

Query: 524 PGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDK 583
            GK + + ++  V   +  +  LL+    D +    +G  P+        L  +  L  +
Sbjct: 219 -GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPESPLAQL-FLERE 276

Query: 584 KAKI 587
            A +
Sbjct: 277 GASL 280

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  157 bits (400), Expect = 7e-44
 Identities = 41/233 (17%), Positives = 83/233 (35%), Gaps = 11/233 (4%)

Query: 403 ACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDG 462
                H      L+  G+++          +  +      +   + L   P +       
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMASMDGK-QGGMDGSKPAGPRDFPGIRLLSNPLMGD-AVSD 59

Query: 463 CTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVD 522
            + +  A   G+      L++ G  +NI      S L  A  GGH   V+ LLK    V+
Sbjct: 60  WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN 119

Query: 523 IPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLID 582
               +  T ++ A   G+   + LLL     ++    D  +P+ +A +  ++E +  LI 
Sbjct: 120 GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ-PESDLASPIHEAARRGHVECVNSLIA 178

Query: 583 KKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKA--GETP 633
               I        T L++A   + +  V+  + +  +       N+    ++P
Sbjct: 179 YGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD------VNQGKGQDSP 225

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 98.7 bits (247), Expect = 5e-23
 Identities = 28/176 (15%), Positives = 63/176 (35%), Gaps = 26/176 (14%)

Query: 468 IACKDGYYEIAVLLLNSGAYINIQD-----RSGDSNLIHAVKGGHRGIVEALLKKYVDVD 522
           +     ++  +  L+  G+++   D       G          G R +   L+       
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGD----- 55

Query: 523 IPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLID 582
                  + ++ A   G+   L+ L++    + I T D  +PL +A    +L  +++L+ 
Sbjct: 56  --AVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLK 113

Query: 583 KKAKITAVDKRGDTVLHIAMRARSKTIVEVFIR-----NPKNNILLYRPNKAGETP 633
             A++  V     T L  A  + S   V + ++      P+++           +P
Sbjct: 114 HGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESD---------LASP 160

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  213 bits (546), Expect = 1e-64
 Identities = 72/308 (23%), Positives = 118/308 (38%), Gaps = 38/308 (12%)

Query: 223 GWSPLMWASYKGHTDTVALLLDKNADVNAHGNYH-ISSLIWAAGRGYTEIVALLVKKGAK 281
               L+ A      D V  LL+  A+VN        + L  A      +IV LL++ GA 
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD 64

Query: 282 VNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGL 341
             +  K  G TP + A   G V+++ + L  GA+V+    + +     +           
Sbjct: 65  PVLRKK-NGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEA----------- 112

Query: 342 ATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLV 401
                    A +G           + +K   ++G +                  G T L+
Sbjct: 113 ---------AVYGK---------VKALKFLYKRGANVN-LRRKTKEDQERLRKGGATALM 153

Query: 402 WACRKGHVEIVDILL-KAGANVDVAGLYCWTPLLVAT----LGNFTEVVELLLEYKPNVN 456
            A  KGHVE++ ILL + GA+V+         L+ A       +   +  LLL++  +VN
Sbjct: 154 DAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN 213

Query: 457 ALDKDGCTALTIACKDGYYEIA-VLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
              + G T L +A +  +  +   LL      IN  D  G + L+ AV+   + I E L 
Sbjct: 214 VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLC 273

Query: 516 KKYVDVDI 523
           K+    D 
Sbjct: 274 KRGASTDC 281

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  186 bits (474), Expect = 3e-54
 Identities = 62/248 (25%), Positives = 115/248 (46%), Gaps = 21/248 (8%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            G TPL  A +    +IV++LL+ GA+  +      TP L+A +    ++++L L    +
Sbjct: 38  GGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGAD 97

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSN----------LIHAVK 504
           VN  D  G TA   A   G  +    L   GA +N++ ++ +            L+ A +
Sbjct: 98  VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157

Query: 505 GGHRGIVEALLKKY-VDVDIPGKERKTAVYTAVEKGNVP----ILKLLLTANPDLEIATK 559
            GH  +++ LL +   DV+      + A+  A+   +      I  LLL    D+ +  +
Sbjct: 158 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE 217

Query: 560 DGDTPLLKAVKTRNLEAIQMLIDKK-AKITAVDKRGDTVLHIAMRARSKTIVEVFIR--- 615
            G TPL+ AV+ ++L  +Q L++++  +I   D  G T L +A+  + K I E+  +   
Sbjct: 218 RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA 277

Query: 616 --NPKNNI 621
             +  + +
Sbjct: 278 STDCGDLV 285

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  185 bits (472), Expect = 5e-54
 Identities = 65/254 (25%), Positives = 111/254 (43%), Gaps = 18/254 (7%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYC-WTPLLVATLGNFTEVVELLLEYKPN 454
               L+ A +   V++V  LL+ GANV+       WTPL  A   +  ++VELLL +  +
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD 64

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
                K+G T   +A   G  ++  L L+ GA +N  D  G +  + A   G    ++ L
Sbjct: 65  PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFL 124

Query: 515 LKKYVDVDIPGKER----------KTAVYTAVEKGNVPILKLLLT-ANPDLEIATKDGDT 563
            K+  +V++  K +           TA+  A EKG+V +LK+LL     D+      G  
Sbjct: 125 YKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN 184

Query: 564 PLLKAV----KTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKN 619
            L+ A+     +       +L+D  A +    +RG T L +A+  +   +V+  +     
Sbjct: 185 ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHI 244

Query: 620 NILLYRPNKAGETP 633
            I     +  G+T 
Sbjct: 245 EI--NDTDSDGKTA 256

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  182 bits (465), Expect = 5e-53
 Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 11/175 (6%)

Query: 154 DDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDN-WSPLTYAAREGYTDVCAELLDH 212
                  L+ A Q   +  V++L+  GA+VN ++ +  W+PL  A +    D+   LL H
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61

Query: 213 GADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIV 272
           GAD   R   G +P + A+  G    + L L K ADVN    Y  ++ + AA  G  + +
Sbjct: 62  GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL 121

Query: 273 ALLVKKGAKVNVGDK---------VYGTTPLVWACRKGHVEIVDILL-KAGANVD 317
             L K+GA VN+  K           G T L+ A  KGHVE++ ILL + GA+V+
Sbjct: 122 KFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN 176

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  179 bits (457), Expect = 7e-52
 Identities = 78/322 (24%), Positives = 118/322 (36%), Gaps = 64/322 (19%)

Query: 14  GDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDK-- 71
            +  LI AV+     +V+ LL+   +V+   +    +  L+      +      LL    
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWT-PLHNAVQMSREDIVELLLRHGA 63

Query: 72  NKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYI 131
           +     K   T    A   G+V +LKL L+   D+                         
Sbjct: 64  DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNE----------------------- 100

Query: 132 AEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDN- 190
                                 D  G TA M AA  GK+  ++ L  RGA+VN       
Sbjct: 101 ---------------------CDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKE 139

Query: 191 ---------WSPLTYAAREGYTDVCAELLDH-GADLEHRDMGGWSPLMWASYKGHTDT-- 238
                     + L  AA +G+ +V   LLD  GAD+   D  G + L+ A          
Sbjct: 140 DQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVE 199

Query: 239 --VALLLDKNADVNAHGNYHISSLIWAAGRGYTEIV-ALLVKKGAKVNVGDKVYGTTPLV 295
               LLLD  ADVN  G    + LI A  + +  +V  LL ++  ++N  D   G T L+
Sbjct: 200 AITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS-DGKTALL 258

Query: 296 WACRKGHVEIVDILLKAGANVD 317
            A      +I ++L K GA+ D
Sbjct: 259 LAVELKLKKIAELLCKRGASTD 280

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  173 bits (441), Expect = 1e-49
 Identities = 49/184 (26%), Positives = 77/184 (41%), Gaps = 17/184 (9%)

Query: 151 DDRDDNGG-TALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAEL 209
           + +++ GG T L  A Q  +   V  L+  GAD      +  +P   AA  G   +    
Sbjct: 32  NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLF 91

Query: 210 LDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISS---------- 259
           L  GAD+   D  G++  M A+  G    +  L  + A+VN                   
Sbjct: 92  LSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATA 151

Query: 260 LIWAAGRGYTEIVALLV-KKGAKVNVGDKVYGTTPLVWACRKGHV----EIVDILLKAGA 314
           L+ AA +G+ E++ +L+ + GA VN  D   G   L+ A           I  +LL  GA
Sbjct: 152 LMDAAEKGHVEVLKILLDEMGADVNACDN-MGRNALIHALLSSDDSDVEAITHLLLDHGA 210

Query: 315 NVDV 318
           +V+V
Sbjct: 211 DVNV 214

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  139 bits (353), Expect = 3e-37
 Identities = 52/254 (20%), Positives = 92/254 (36%), Gaps = 9/254 (3%)

Query: 5   DVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRST 64
           +V+ + +  G + L +AV+     IVE LL+   D  +  K         +         
Sbjct: 30  NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGAT--PFLLAAIAGSVKL 87

Query: 65  TRNLLDK--NKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSL 122
            +  L K  + ++      TA   A   G V  LK L     ++ +  KT    + +   
Sbjct: 88  LKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKG 147

Query: 123 CYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRE----LVT 178
               L     + +++ L+  L+      +  D+ G  AL+ A      S V      L+ 
Sbjct: 148 GATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLD 207

Query: 179 RGADVNAEDNDNWSPLTYAAREGYTDVCAELLDH-GADLEHRDMGGWSPLMWASYKGHTD 237
            GADVN       +PL  A  + +  +   LL+    ++   D  G + L+ A       
Sbjct: 208 HGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKK 267

Query: 238 TVALLLDKNADVNA 251
              LL  + A  + 
Sbjct: 268 IAELLCKRGASTDC 281

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  125 bits (317), Expect = 2e-32
 Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 13/186 (6%)

Query: 459 DKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSN-LIHAVKGGHRGIVEALLKK 517
             +    L  A ++   ++   LL  GA +N Q+  G    L +AV+     IVE LL+ 
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61

Query: 518 YVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAI 577
             D  +  K   T    A   G+V +LKL L+   D+      G T  ++A     ++A+
Sbjct: 62  GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL 121

Query: 578 QMLIDKKAKITAVDK----------RGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPN 627
           + L  + A +    K           G T L  A       ++++ +     ++     +
Sbjct: 122 KFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV--NACD 179

Query: 628 KAGETP 633
             G   
Sbjct: 180 NMGRNA 185

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 91.4 bits (228), Expect = 2e-20
 Identities = 51/229 (22%), Positives = 85/229 (37%), Gaps = 27/229 (11%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
            R ++G +  + A   G   +++  L K  DV+          A        +    + L
Sbjct: 67  LRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGF--TAFMEAAVYGKVKALKFL 124

Query: 69  LD-------KNKHKSLKER-----KTAVYTAVEKGNVPILKLLLT-ANPDLEIATKTLPR 115
                    + K K  +ER      TA+  A EKG+V +LK+LL     D+         
Sbjct: 125 YKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDN---- 180

Query: 116 SDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVAD--DRDDNGGTALMFAAQKGKLSFV 173
                +L +  L S    D        L++    AD   R + G T L+ A +K  L  V
Sbjct: 181 -MGRNALIHALLSSDD-SDVEAITHLLLDHG---ADVNVRGERGKTPLILAVEKKHLGLV 235

Query: 174 RELVTR-GADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDM 221
           + L+ +   ++N  D+D  + L  A       +   L   GA  +  D+
Sbjct: 236 QRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 54.0 bits (131), Expect = 4e-08
 Identities = 17/61 (27%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 557 ATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKR-GDTVLHIAMRARSKTIVEVFIR 615
           A  + +  L+KAV+  +++ +Q L++  A +   ++  G T LH A++   + IVE+ +R
Sbjct: 1   AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLR 60

Query: 616 N 616
           +
Sbjct: 61  H 61

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  209 bits (534), Expect = 5e-63
 Identities = 63/305 (20%), Positives = 96/305 (31%), Gaps = 31/305 (10%)

Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNAD---VNAHGNYHISSLIWAAGRGYTEIV 272
             +    G + L  A    H   +  LL  +A    ++   +   ++L  AA  G    V
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTV 61

Query: 273 ALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSAL 332
             L   GA V V ++  G T L  ACR        +LL+   +            Y +  
Sbjct: 62  EKLYAAGAGVLVAER-GGHTALHLACRVRAHTCACVLLQPRPSHPRDA----SDTYLTQS 116

Query: 333 ADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMH 392
            D   +   A      + ++             EE    E   +                
Sbjct: 117 QDCTPDTSHAPAA---VDSQPN--------PENEEEPRDEDWRLQLEAENY--------- 156

Query: 393 LSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYC-WTPLLVATLGNFTEVVELLLEY 451
              G TPL  A      E+V +L  AGA+++     C  TPL +A       V+ELLL+ 
Sbjct: 157 --DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA 214

Query: 452 KPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIV 511
             +  A    G T L  A       +A LL   GA          S    +         
Sbjct: 215 GADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNR 274

Query: 512 EALLK 516
           +   +
Sbjct: 275 DEGDE 279

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  178 bits (455), Expect = 1e-51
 Identities = 49/257 (19%), Positives = 84/257 (32%), Gaps = 21/257 (8%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGAN---VDVAGLYCWTPLLVATLGNFTEVVELLLEY 451
            G T L  A    H   +D LL   A    +D+      T L +A +      VE L   
Sbjct: 8   DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAA 67

Query: 452 KPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSN------------- 498
              V   ++ G TAL +AC+   +  A +LL                             
Sbjct: 68  GAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAP 127

Query: 499 -LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIA 557
             + +                + ++    +  T ++ AV   +  +++LL  A  DL   
Sbjct: 128 AAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKP 187

Query: 558 TKD-GDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN 616
               G TPL  AV+ +    +++L+   A  TA    G T L  A+   +  +  +   +
Sbjct: 188 EPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAH 247

Query: 617 PKNNILLYRPNKAGETP 633
                          +P
Sbjct: 248 -GAPE--PEDGGDKLSP 261

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  173 bits (440), Expect = 2e-49
 Identities = 48/232 (20%), Positives = 75/232 (32%), Gaps = 15/232 (6%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            G T L  A   G    V+ L  AGA V VA     T L +A          +LL+ +P+
Sbjct: 44  LGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPS 103

Query: 455 VNALDKDGCT--------------ALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLI 500
                 D                 A   +  +   E      +    +  ++  G + L 
Sbjct: 104 HPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH 163

Query: 501 HAVKGGHRGIVEALLKKYVDVDIPGKER-KTAVYTAVEKGNVPILKLLLTANPDLEIATK 559
            AV      +V  L     D++ P     +T ++ AVE     +L+LLL A  D      
Sbjct: 164 VAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMY 223

Query: 560 DGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVE 611
            G TPL  A+   N    ++L    A          +    +         +
Sbjct: 224 GGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNRD 275

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  172 bits (438), Expect = 4e-49
 Identities = 55/308 (17%), Positives = 88/308 (28%), Gaps = 41/308 (13%)

Query: 11  DRSGDSNLIHAVKGGHRGIVEALLKK---YVDVDIPGKVRKLSDALNVTDANDQRSTTRN 67
              GD+ L  AV   H   ++ LL     +  +D+   + +   AL++     + ST   
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQT--ALHLAAILGEASTVEK 63

Query: 68  LLDK--NKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYR 125
           L         + +   TA++ A          +LL   P           + S       
Sbjct: 64  LYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQS------- 116

Query: 126 TLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRE-LVTRGADVN 184
                                    D   D         +Q    +            + 
Sbjct: 117 ------------------------QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE 152

Query: 185 AEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRD-MGGWSPLMWASYKGHTDTVALLL 243
           AE+ D  +PL  A      ++   L D GADL   +   G +PL  A        + LLL
Sbjct: 153 AENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLL 212

Query: 244 DKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHV 303
              AD  A      + L  A  R    +  LL   GA           +P   +      
Sbjct: 213 KAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGG-DKLSPCSSSGSDSDS 271

Query: 304 EIVDILLK 311
           +  D   +
Sbjct: 272 DNRDEGDE 279

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  168 bits (427), Expect = 1e-47
 Identities = 46/196 (23%), Positives = 67/196 (34%), Gaps = 14/196 (7%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
           D ++D G TAL  AA  G+ S V +L   GA V   +    + L  A R         LL
Sbjct: 39  DLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLL 98

Query: 211 DHGADLEHRDMGGWSP--------------LMWASYKGHTDTVALLLDKNADVNAHGNYH 256
                        +                 + +      +      D    + A     
Sbjct: 99  QPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG 158

Query: 257 ISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANV 316
            + L  A      E+V LL   GA +N  +   G TPL  A       ++++LLKAGA+ 
Sbjct: 159 HTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP 218

Query: 317 DVAGLWAYMPLYSSAL 332
                    PL S+ L
Sbjct: 219 TARMYGGRTPLGSALL 234

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  120 bits (304), Expect = 1e-30
 Identities = 21/152 (13%), Positives = 36/152 (23%), Gaps = 16/152 (10%)

Query: 183 VNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEH---RDMGGWSPLMWASYKGHTDTV 239
                 D  + L  A    +      LL   A  E+   ++  G + L  A+  G   TV
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTV 61

Query: 240 ALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVN-------------VGD 286
             L    A V        ++L  A          +L++                      
Sbjct: 62  EKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTP 121

Query: 287 KVYGTTPLVWACRKGHVEIVDILLKAGANVDV 318
                   V +      E           ++ 
Sbjct: 122 DTSHAPAAVDSQPNPENEEEPRDEDWRLQLEA 153

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  119 bits (302), Expect = 2e-30
 Identities = 38/250 (15%), Positives = 61/250 (24%), Gaps = 57/250 (22%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTD----------- 57
             +R G + L  A +         LL+             L+ + + T            
Sbjct: 73  VAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDS 132

Query: 58  -ANDQRSTTRNLLDK--NKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLP 114
             N +        D          +  T ++ AV   +  +++LL  A  DL        
Sbjct: 133 QPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEP--- 189

Query: 115 RSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVR 174
                                                     G T L  A +    S + 
Sbjct: 190 ----------------------------------------TCGRTPLHLAVEAQAASVLE 209

Query: 175 ELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKG 234
            L+  GAD  A      +PL  A       +   L  HGA          SP   +    
Sbjct: 210 LLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDS 269

Query: 235 HTDTVALLLD 244
            +D      +
Sbjct: 270 DSDNRDEGDE 279

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  117 bits (295), Expect = 2e-29
 Identities = 39/201 (19%), Positives = 64/201 (31%), Gaps = 29/201 (14%)

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGA---YINIQDRSGDSNLIHAVKGGHRGIV 511
              + +DG TAL +A    +      LL   A   Y+++Q+  G + L  A   G    V
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTV 61

Query: 512 EALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTP------- 564
           E L      V +  +   TA++ A          +LL   P       D           
Sbjct: 62  EKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTP 121

Query: 565 -------LLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIR-- 615
                   + +      E      D + ++ A +  G T LH+A+  +   +V +     
Sbjct: 122 DTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAG 181

Query: 616 ---NPKNNILLYRPNKAGETP 633
              N             G TP
Sbjct: 182 ADLNKPE-------PTCGRTP 195

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 68.0 bits (167), Expect = 1e-12
 Identities = 12/57 (21%), Positives = 22/57 (38%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEY 451
            G TPL  A  + +  +  +L   GA     G    +P   +   + ++  +   EY
Sbjct: 224 GGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNRDEGDEY 280

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  198 bits (507), Expect = 1e-60
 Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 1/164 (0%)

Query: 156 NGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGAD 215
               ++   A +G++ ++   + +   +N  D + ++PL +AA  G   V   LL +GAD
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD 61

Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
            +    G  S L  A  KG+TD V +LLD   DVN +     + L++A    + + V +L
Sbjct: 62  PQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKML 121

Query: 276 VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVA 319
           ++ GA   +     G   +  A   G+  +  ++      +   
Sbjct: 122 LESGADPTIETD-SGYNSMDLAVALGYRSVQQVIESHLLKLLQN 164

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  164 bits (417), Expect = 1e-47
 Identities = 42/137 (30%), Positives = 66/137 (48%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
           +  D+ G T LM+AA  G+++ V  L+  GAD         S L+ A  +GYTD+   LL
Sbjct: 30  NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLL 89

Query: 211 DHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTE 270
           D G D+   D  G +PL++A +  H   V +LL+  AD     +   +S+  A   GY  
Sbjct: 90  DCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRS 149

Query: 271 IVALLVKKGAKVNVGDK 287
           +  ++     K+    K
Sbjct: 150 VQQVIESHLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  163 bits (416), Expect = 2e-47
 Identities = 40/165 (24%), Positives = 74/165 (44%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
            +  +     +G +  +   ++    ++      +TPL+ A       VVE LL+   + 
Sbjct: 3   NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP 62

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
             L K   +AL++AC  GY +I  +LL+ G  +N  D +G + L++AV G H   V+ LL
Sbjct: 63  QLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLL 122

Query: 516 KKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKD 560
           +   D  I       ++  AV  G   + +++ +    L    K+
Sbjct: 123 ESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNIKE 167

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  148 bits (377), Expect = 5e-42
 Identities = 39/163 (23%), Positives = 63/163 (38%)

Query: 430 WTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYIN 489
              +           +   +E +  +N  D++G T L  A   G   +   LL +GA   
Sbjct: 4   SLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ 63

Query: 490 IQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLT 549
           +  +  +S L  A   G+  IV+ LL   VDV+       T +  AV   +V  +K+LL 
Sbjct: 64  LLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 123

Query: 550 ANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDK 592
           +  D  I T  G   +  AV        Q++     K+    K
Sbjct: 124 SGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  145 bits (370), Expect = 4e-41
 Identities = 40/133 (30%), Positives = 70/133 (52%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            G TPL+WA   G + +V+ LL+ GA+  + G    + L +A    +T++V++LL+   +
Sbjct: 35  EGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVD 94

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           VN  D +G T L  A    + +   +LL SGA   I+  SG +++  AV  G+R + + +
Sbjct: 95  VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVI 154

Query: 515 LKKYVDVDIPGKE 527
               + +    KE
Sbjct: 155 ESHLLKLLQNIKE 167

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  129 bits (328), Expect = 4e-35
 Identities = 35/234 (14%), Positives = 63/234 (26%), Gaps = 77/234 (32%)

Query: 18  LIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSL 77
           +      G    +   +++   +             N TD                    
Sbjct: 7   VHQLAAQGEMLYLATRIEQENVI-------------NHTD-------------------- 33

Query: 78  KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLD 137
           +E  T +  A   G + +++ LL    D ++                             
Sbjct: 34  EEGFTPLMWAAAHGQIAVVEFLLQNGADPQLL---------------------------- 65

Query: 138 SLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYA 197
                                +AL  A  KG    V+ L+  G DVN  D +  +PL YA
Sbjct: 66  ----------------GKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYA 109

Query: 198 AREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNA 251
               +      LL+ GAD       G++ +  A   G+     ++      +  
Sbjct: 110 VHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQ 163

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 93.6 bits (234), Expect = 2e-22
 Identities = 40/212 (18%), Positives = 61/212 (28%), Gaps = 77/212 (36%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
             D  G + L+ A   G   +VE LL+   D               +             
Sbjct: 31  HTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-------------QLLG----------- 66

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQ 128
                    K R++A+  A  KG   I+K+LL    D+                      
Sbjct: 67  ---------KGRESALSLACSKGYTDIVKMLLDCGVDVNE-------------------- 97

Query: 129 SYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDN 188
                                    D NGGT L++A     +  V+ L+  GAD   E +
Sbjct: 98  ------------------------YDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETD 133

Query: 189 DNWSPLTYAAREGYTDVCAELLDHGADLEHRD 220
             ++ +  A   GY  V   +  H   L    
Sbjct: 134 SGYNSMDLAVALGYRSVQQVIESHLLKLLQNI 165

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 84.4 bits (210), Expect = 3e-19
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 1/73 (1%)

Query: 259 SLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDV 318
           S+   A +G    +A  +++   +N  D+  G TPL+WA   G + +V+ LL+ GA+  +
Sbjct: 6   SVHQLAAQGEMLYLATRIEQENVINHTDE-EGFTPLMWAAAHGQIAVVEFLLQNGADPQL 64

Query: 319 AGLWAYMPLYSSA 331
            G      L  + 
Sbjct: 65  LGKGRESALSLAC 77

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 55.9 bits (136), Expect = 2e-09
 Identities = 28/185 (15%), Positives = 45/185 (24%), Gaps = 78/185 (42%)

Query: 5   DVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRST 64
           D      +  +S L  A   G+  IV+ LL   VDV             N  D       
Sbjct: 61  DPQLL-GKGRESALSLACSKGYTDIVKMLLDCGVDV-------------NEYD------- 99

Query: 65  TRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCY 124
                            T +  AV   +V  +K+LL +  D  I                
Sbjct: 100 -------------WNGGTPLLYAVHGNHVKCVKMLLESGADPTIE--------------- 131

Query: 125 RTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVN 184
                                         D+G  ++  A   G  S  + + +    + 
Sbjct: 132 -----------------------------TDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162

Query: 185 AEDND 189
               +
Sbjct: 163 QNIKE 167

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  195 bits (498), Expect = 3e-59
 Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 2/164 (1%)

Query: 157 GGTALMFAAQKGKLSFVRELVTRGAD-VNAEDNDNWSPLTYAAREGYTDVCAELLDHGAD 215
              ++   A +G+L  ++E + +G + VN  D   ++PL +A+  G  +    LL+ GAD
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61

Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
                    S L  AS  G+TD V LLL+++ D+N +     + L++A    + + V  L
Sbjct: 62  PHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEAL 121

Query: 276 VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVA 319
           + +GA +       G TP+  A   G+ ++  ++      +  +
Sbjct: 122 LARGADLTTEAD-SGYTPMDLAVALGYRKVQQVIENHILKLFQS 164

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  172 bits (438), Expect = 1e-50
 Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 1/159 (0%)

Query: 135 NLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPL 194
            LD L+  L     + +  D+ G T L++A+  G++  VR L+  GAD +    +  S L
Sbjct: 14  ELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESAL 73

Query: 195 TYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGN 254
           + A+  GYTD+   LL+   D+   D  G +PL++A    H   V  LL + AD+    +
Sbjct: 74  SLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEAD 133

Query: 255 YHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTP 293
              + +  A   GY ++  ++     K+   +      P
Sbjct: 134 SGYTPMDLAVALGYRKVQQVIENHILKLFQSNL-VPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  166 bits (424), Expect = 1e-48
 Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 1/170 (0%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGAN-VDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            +  +     +G ++ +   L+ G N V+      +TPL+ A+     E V  LLE+  +
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
            + L K+  +AL++A   GY +I  LLL     INI D +G + L++AV+G H   VEAL
Sbjct: 62  PHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEAL 121

Query: 515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTP 564
           L +  D+        T +  AV  G   + +++      L  +      P
Sbjct: 122 LARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  161 bits (410), Expect = 1e-46
 Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 2/143 (1%)

Query: 190 NWSPLTYAAREGYTDVCAELLDHGADLEH-RDMGGWSPLMWASYKGHTDTVALLLDKNAD 248
           +   +   A +G  D   E L  G +L +  D  G++PL+WAS  G  +TV  LL+  AD
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61

Query: 249 VNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDI 308
            +       S+L  A+  GYT+IV LL+++   +N+ D   G TPL++A R  HV+ V+ 
Sbjct: 62  PHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDW-NGGTPLLYAVRGNHVKCVEA 120

Query: 309 LLKAGANVDVAGLWAYMPLYSSA 331
           LL  GA++       Y P+  + 
Sbjct: 121 LLARGADLTTEADSGYTPMDLAV 143

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  151 bits (385), Expect = 4e-43
 Identities = 38/136 (27%), Positives = 65/136 (47%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            G TPL+WA   G +E V  LL+ GA+  +      + L +A+ G +T++V LLLE   +
Sbjct: 35  RGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVD 94

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           +N  D +G T L  A +  + +    LL  GA +  +  SG + +  AV  G+R + + +
Sbjct: 95  INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVI 154

Query: 515 LKKYVDVDIPGKERKT 530
               + +         
Sbjct: 155 ENHILKLFQSNLVPAD 170

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  129 bits (326), Expect = 7e-35
 Identities = 38/238 (15%), Positives = 63/238 (26%), Gaps = 76/238 (31%)

Query: 18  LIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSL 77
           +      G    ++  L+K       G      + +N  D                    
Sbjct: 6   IHQLAAQGELDQLKEHLRK-------GD-----NLVNKPDERGF---------------- 37

Query: 78  KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLD 137
               T +  A   G +  ++ LL    D  I                             
Sbjct: 38  ----TPLIWASAFGEIETVRFLLEWGADPHIL---------------------------- 65

Query: 138 SLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYA 197
                                +AL  A+  G    V  L+ R  D+N  D +  +PL YA
Sbjct: 66  ----------------AKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYA 109

Query: 198 AREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNY 255
            R  +      LL  GADL      G++P+  A   G+     ++ +    +      
Sbjct: 110 VRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLV 167

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  122 bits (309), Expect = 1e-32
 Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 2/111 (1%)

Query: 222 GGWSPLMWASYKGHTDTVALLLDKNAD-VNAHGNYHISSLIWAAGRGYTEIVALLVKKGA 280
           G    +   + +G  D +   L K  + VN       + LIWA+  G  E V  L++ GA
Sbjct: 1   GDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGA 60

Query: 281 KVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSA 331
             ++  K    + L  A   G+ +IV +LL+   ++++       PL  + 
Sbjct: 61  DPHILAK-ERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAV 110

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  101 bits (254), Expect = 4e-25
 Identities = 46/222 (20%), Positives = 71/222 (31%), Gaps = 77/222 (34%)

Query: 5   DVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRST 64
           ++ +K D  G + LI A   G    V  LL+   D  I                      
Sbjct: 27  NLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILA-------------------- 66

Query: 65  TRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCY 124
                        KER++A+  A   G   I+ LLL  + D+ I                
Sbjct: 67  -------------KERESALSLASTGGYTDIVGLLLERDVDINI---------------- 97

Query: 125 RTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVN 184
                                        D NGGT L++A +   +  V  L+ RGAD+ 
Sbjct: 98  ----------------------------YDWNGGTPLLYAVRGNHVKCVEALLARGADLT 129

Query: 185 AEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSP 226
            E +  ++P+  A   GY  V   + +H   L   ++    P
Sbjct: 130 TEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 53.6 bits (130), Expect = 2e-08
 Identities = 7/38 (18%), Positives = 15/38 (39%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTP 432
            G TP+  A   G+ ++  ++      +  + L    P
Sbjct: 134 SGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  197 bits (503), Expect = 4e-59
 Identities = 68/223 (30%), Positives = 109/223 (48%), Gaps = 1/223 (0%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
              +PL  A   GHV+I  +L++AGAN+D       TPL+ A   N  E V+ L++    
Sbjct: 10  NKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL 69

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAY-INIQDRSGDSNLIHAVKGGHRGIVEA 513
           V+  D +G T L +A K G+YE+   LL++G   +N QD  G + +I A +  H  +V+ 
Sbjct: 70  VDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKL 129

Query: 514 LLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRN 573
           LL K  D++I   E    ++ A   G V I ++LL A  DL      GD+PL  A +   
Sbjct: 130 LLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENR 189

Query: 574 LEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN 616
            + + + + + + +T  +K G+T L  A             + 
Sbjct: 190 YDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKA 232

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  186 bits (475), Expect = 5e-55
 Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 2/182 (1%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
                N  + L  AA+ G +     LV  GA+++    D  +PL  AA   + +    L+
Sbjct: 5   KMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLI 64

Query: 211 DHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNA-DVNAHGNYHISSLIWAAGRGYT 269
             GA ++ +D  G + L  A+ KGH + V  LL     DVN   +   + +IWA    + 
Sbjct: 65  KAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHV 124

Query: 270 EIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYS 329
           ++V LL+ KG+ +N+ D       L WA   G V+I +ILL A  ++    +    PL+ 
Sbjct: 125 DLVKLLLSKGSDINIRDN-EENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHI 183

Query: 330 SA 331
           +A
Sbjct: 184 AA 185

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  184 bits (471), Expect = 2e-54
 Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 17/247 (6%)

Query: 72  NKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYI 131
           N     + +++ ++ A E G+V I  +L+ A  +++  ++     D    L         
Sbjct: 3   NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSE-----DQRTPL-------ME 50

Query: 132 A--EDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGA-DVNAEDN 188
           A   ++L++++  ++    V D +D  G T L  AA+KG    V+ L++ G  DVN +D+
Sbjct: 51  AAENNHLEAVKYLIKAGALV-DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDD 109

Query: 189 DNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNAD 248
             W+P+ +A    + D+   LL  G+D+  RD      L WA++ G  D   +LL    D
Sbjct: 110 GGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCD 169

Query: 249 VNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDI 308
           ++A   +  S L  AA     + V L + + + V + +K  G TPL  A     V     
Sbjct: 170 LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNK-EGETPLQCASLNSQVWSALQ 228

Query: 309 LLKAGAN 315
           + KA  +
Sbjct: 229 MSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  184 bits (469), Expect = 3e-54
 Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 2/170 (1%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
           D   ++  T LM AA+   L  V+ L+  GA V+ +D +  + L  AA++G+ +V   LL
Sbjct: 38  DTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLL 97

Query: 211 DHGA-DLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYT 269
            +G  D+  +D GGW+P++WA+   H D V LLL K +D+N   N     L WAA  G  
Sbjct: 98  SNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCV 157

Query: 270 EIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVA 319
           +I  +L+     ++  +  +G +PL  A R+   + V + L   ++V + 
Sbjct: 158 DIAEILLAAKCDLHAVNI-HGDSPLHIAARENRYDCVVLFLSRDSDVTLK 206

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  167 bits (425), Expect = 7e-48
 Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 1/192 (0%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYK-P 453
              TPL+ A    H+E V  L+KAGA VD       T L +A      EVV+ LL     
Sbjct: 43  DQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQM 102

Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEA 513
           +VN  D  G T +  A +  + ++  LLL+ G+ INI+D   +  L  A   G   I E 
Sbjct: 103 DVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEI 162

Query: 514 LLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRN 573
           LL    D+        + ++ A  +     + L L+ + D+ +  K+G+TPL  A     
Sbjct: 163 LLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQ 222

Query: 574 LEAIQMLIDKKA 585
           + +   +     
Sbjct: 223 VWSALQMSKALQ 234

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  163 bits (415), Expect = 2e-46
 Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 4/215 (1%)

Query: 420 ANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAV 479
            N  +      +PL  A      ++  +L++   N++   +D  T L  A ++ + E   
Sbjct: 2   MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVK 61

Query: 480 LLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKK-YVDVDIPGKERKTAVYTAVEK 538
            L+ +GA ++ +D  G + L  A K GH  +V+ LL    +DV+       T +  A E 
Sbjct: 62  YLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEY 121

Query: 539 GNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVL 598
            +V ++KLLL+   D+ I   + +  L  A  +  ++  ++L+  K  + AV+  GD+ L
Sbjct: 122 KHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPL 181

Query: 599 HIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP 633
           HIA R      V +F+     +  +   NK GETP
Sbjct: 182 HIAARENRYDCVVLFL---SRDSDVTLKNKEGETP 213

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  155 bits (395), Expect = 1e-43
 Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 2/138 (1%)

Query: 181 ADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVA 240
            +   E  +  SPL  AA  G+ D+C  L+  GA+++       +PLM A+   H + V 
Sbjct: 2   MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVK 61

Query: 241 LLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAK-VNVGDKVYGTTPLVWACR 299
            L+   A V+       + L  AA +G+ E+V  L+  G   VN  D   G TP++WA  
Sbjct: 62  YLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDD-GGWTPMIWATE 120

Query: 300 KGHVEIVDILLKAGANVD 317
             HV++V +LL  G++++
Sbjct: 121 YKHVDLVKLLLSKGSDIN 138

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  149 bits (378), Expect = 2e-41
 Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 1/160 (0%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGA-NVDVAGLYCWTPLLVATLGNFTEVVELLLEYKP 453
            G+T L  A +KGH E+V  LL  G  +V+      WTP++ AT     ++V+LLL    
Sbjct: 76  EGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGS 135

Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEA 513
           ++N  D +    L  A   G  +IA +LL +   ++  +  GDS L  A +      V  
Sbjct: 136 DINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVL 195

Query: 514 LLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPD 553
            L +  DV +  KE +T +  A     V     +  A  D
Sbjct: 196 FLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  144 bits (366), Expect = 1e-39
 Identities = 52/272 (19%), Positives = 91/272 (33%), Gaps = 76/272 (27%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
                  + L+ A +  H   V+ L+K    VD                           
Sbjct: 39  TCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDP-------------------------- 72

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQ 128
             K+         T ++ A +KG+  +++ LL                            
Sbjct: 73  --KDAE-----GSTCLHLAAKKGHYEVVQYLL---------------------------- 97

Query: 129 SYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDN 188
           S    D                + +DD G T +++A +   +  V+ L+++G+D+N  DN
Sbjct: 98  SNGQMD---------------VNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDN 142

Query: 189 DNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNAD 248
           +    L +AA  G  D+   LL    DL   ++ G SPL  A+ +   D V L L +++D
Sbjct: 143 EENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSD 202

Query: 249 VNAHGNYHISSLIWAAGRGYTEIVALLVKKGA 280
           V        + L  A+          + K   
Sbjct: 203 VTLKNKEGETPLQCASLNSQVWSALQMSKALQ 234

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 83.2 bits (207), Expect = 4e-18
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 246 NADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEI 305
           + +         S L  AA  G+ +I  +LV+ GA ++   +    TPL+ A    H+E 
Sbjct: 1   HMNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSE-DQRTPLMEAAENNHLEA 59

Query: 306 VDILLKAGANVDVAGLWAYMPLYSSA 331
           V  L+KAGA VD         L+ +A
Sbjct: 60  VKYLIKAGALVDPKDAEGSTCLHLAA 85

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 78.2 bits (194), Expect = 2e-16
 Identities = 32/207 (15%), Positives = 63/207 (30%), Gaps = 77/207 (37%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
            +D  G + +I A +  H  +V+ LL K  D++I                          
Sbjct: 106 CQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINI-------------------------- 139

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQ 128
             ++  +        ++ A   G V I ++LL A  DL                      
Sbjct: 140 --RDNEE-----NICLHWAAFSGCVDIAEILLAAKCDLHA-------------------- 172

Query: 129 SYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDN 188
                                    + +G + L  AA++ +   V   ++R +DV  ++ 
Sbjct: 173 ------------------------VNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNK 208

Query: 189 DNWSPLTYAAREGYTDVCAELLDHGAD 215
           +  +PL  A+         ++     D
Sbjct: 209 EGETPLQCASLNSQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 57.0 bits (139), Expect = 3e-09
 Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 5/75 (6%)

Query: 551 NPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIV 610
           + + ++  ++  +PL  A +  +++   ML+   A I    +   T L  A        V
Sbjct: 1   HMNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAV 60

Query: 611 EVFIR-----NPKNN 620
           +  I+     +PK+ 
Sbjct: 61  KYLIKAGALVDPKDA 75

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  196 bits (502), Expect = 8e-59
 Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 3/229 (1%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           Y T  +V A + G  E    L++AG +V        T L  A + N  ++V+  +     
Sbjct: 8   YSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAI 67

Query: 455 VNALDKD-GCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEA 513
           V+ L  D   T L  A + G+  + V L+  GA  ++ D  G S +  A + GH  IV  
Sbjct: 68  VDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAY 127

Query: 514 LLKKYVDVDIPGKERKTAVYTAVEKGN-VPILKLLLTANPDLEIATK-DGDTPLLKAVKT 571
           L+ K  DVD+  +   T +  A  + + V   +LLLT N  + +  K   +T L  AV  
Sbjct: 128 LIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLA 187

Query: 572 RNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNN 620
            N   I +L++  A + A + +G++ L +A + ++  ++       +  
Sbjct: 188 GNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAK 236

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  196 bits (501), Expect = 1e-58
 Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 3/171 (1%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
              DD     ++ A Q G     RELV  G DV   D +N + L +AA     D+    +
Sbjct: 3   THIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYI 62

Query: 211 DHGADLEHRDM-GGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYT 269
             GA ++        +PL WA+ +GH   V  L+   AD +       S +  AA  G+T
Sbjct: 63  SKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHT 122

Query: 270 EIVALLVKKGAKVNVGDKVYGTTPLVWACRKGH-VEIVDILLKAGANVDVA 319
            IVA L+ KG  V++ D+  G TPL+WA  + H V+   +LL    +V++ 
Sbjct: 123 SIVAYLIAKGQDVDMMDQ-NGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLG 172

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  192 bits (491), Expect = 2e-57
 Identities = 70/313 (22%), Positives = 118/313 (37%), Gaps = 83/313 (26%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
             D     +++ A + G       L++   DV  P K                       
Sbjct: 4   HIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDK----------------------- 40

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLT--ANPDLEIATKTLPRSDSMVSLCYRT 126
                     E  T ++ A     + ++K  ++  A  D                     
Sbjct: 41  ----------ENVTLLHWAAINNRIDLVKYYISKGAIVD--------------------- 69

Query: 127 LQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAE 186
                                       D   T L +A ++G LS V +L+  GAD +  
Sbjct: 70  -----QLGG-------------------DLNSTPLHWATRQGHLSMVVQLMKYGADPSLI 105

Query: 187 DNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHT-DTVALLLDK 245
           D +  S +  AA+ G+T + A L+  G D++  D  G +PLMWA+Y+ H+ D   LLL  
Sbjct: 106 DGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTF 165

Query: 246 NADVNAHGNYH-ISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVE 304
           N  VN    YH  ++L WA   G T +++LL++ GA V+  +   G + L  A ++ +V 
Sbjct: 166 NVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI-KGESALDLAKQRKNVW 224

Query: 305 IVDILLKAGANVD 317
           +++ L +A     
Sbjct: 225 MINHLQEARQAKG 237

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  173 bits (442), Expect = 3e-50
 Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 3/198 (1%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYC-WTPLLVATLGNFTEVVELLLEYKP 453
              T L WA     +++V   +  GA VD  G     TPL  AT      +V  L++Y  
Sbjct: 41  ENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGA 100

Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRG-IVE 512
           + + +D +GC+ + +A + G+  I   L+  G  +++ D++G + L+ A    H      
Sbjct: 101 DPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTR 160

Query: 513 ALLKKYVDVDIPGK-ERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKT 571
            LL   V V++  K  + TA++ AV  GN  ++ LLL A  +++     G++ L  A + 
Sbjct: 161 LLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQR 220

Query: 572 RNLEAIQMLIDKKAKITA 589
           +N+  I  L + +     
Sbjct: 221 KNVWMINHLQEARQAKGY 238

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  164 bits (417), Expect = 9e-47
 Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 2/150 (1%)

Query: 183 VNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALL 242
           +   D+ +   +  A + G  + C EL++ G D+   D    + L WA+     D V   
Sbjct: 2   MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYY 61

Query: 243 LDKNADVNAHGNYH-ISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKG 301
           + K A V+  G     + L WA  +G+  +V  L+K GA  ++ D   G + +  A + G
Sbjct: 62  ISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDG-EGCSCIHLAAQFG 120

Query: 302 HVEIVDILLKAGANVDVAGLWAYMPLYSSA 331
           H  IV  L+  G +VD+       PL  +A
Sbjct: 121 HTSIVAYLIAKGQDVDMMDQNGMTPLMWAA 150

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  154 bits (392), Expect = 3e-43
 Identities = 46/216 (21%), Positives = 96/216 (44%), Gaps = 6/216 (2%)

Query: 421 NVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVL 480
           ++     Y    ++ AT     E    L+E   +V   DK+  T L  A  +   ++   
Sbjct: 1   HMTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKY 60

Query: 481 LLNSGAYINIQDR-SGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKG 539
            ++ GA ++        + L  A + GH  +V  L+K   D  +   E  + ++ A + G
Sbjct: 61  YISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFG 120

Query: 540 NVPILKLLLTANPDLEIATKDGDTPLLKAV-KTRNLEAIQMLIDKKAKITAVDKR-GDTV 597
           +  I+  L+    D+++  ++G TPL+ A  +T +++  ++L+     +   DK   +T 
Sbjct: 121 HTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTA 180

Query: 598 LHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP 633
           LH A+ A + T++ + +   +    +   N  GE+ 
Sbjct: 181 LHWAVLAGNTTVISLLL---EAGANVDAQNIKGESA 213

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  118 bits (298), Expect = 3e-30
 Identities = 44/249 (17%), Positives = 79/249 (31%), Gaps = 79/249 (31%)

Query: 5   DVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRST 64
            V         + L  A + GH  +V  L+K   D              ++ D       
Sbjct: 67  IVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP-------------SLID------- 106

Query: 65  TRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCY 124
                         E  + ++ A + G+  I+  L+    D+++                
Sbjct: 107 -------------GEGCSCIHLAAQFGHTSIVAYLIAKGQDVDM---------------- 137

Query: 125 RTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKG-KLSFVRELVTRGADV 183
                                        D NG T LM+AA +   +   R L+T    V
Sbjct: 138 ----------------------------MDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSV 169

Query: 184 NAEDNDN-WSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALL 242
           N  D  +  + L +A   G T V + LL+ GA+++ +++ G S L  A  + +   +  L
Sbjct: 170 NLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHL 229

Query: 243 LDKNADVNA 251
            +       
Sbjct: 230 QEARQAKGY 238

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 93.3 bits (233), Expect = 1e-21
 Identities = 37/217 (17%), Positives = 74/217 (34%), Gaps = 18/217 (8%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
           + D+   + L  A       +V+  + K   VD  G     +  L+        S    L
Sbjct: 37  QPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNST-PLHWATRQGHLSMVVQL 95

Query: 69  LDK--NKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRT 126
           +    +      E  + ++ A + G+  I+  L+    D+++  +     + M  L    
Sbjct: 96  MKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQ-----NGMTPL---- 146

Query: 127 LQSYIAEDNLDSLQT--FLENKRTVADDRDDNGG-TALMFAAQKGKLSFVRELVTRGADV 183
                A     S+     L       +  D     TAL +A   G  + +  L+  GA+V
Sbjct: 147 ---MWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANV 203

Query: 184 NAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRD 220
           +A++    S L  A +     +   L +      + +
Sbjct: 204 DAQNIKGESALDLAKQRKNVWMINHLQEARQAKGYDN 240

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  201 bits (513), Expect = 8e-59
 Identities = 80/416 (19%), Positives = 139/416 (33%), Gaps = 87/416 (20%)

Query: 224 WSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVN 283
           W P M               +KN   +        SL+ A+  GY +     ++      
Sbjct: 17  WMPPMENE------------EKNRKNHQSITSSQHSLLEASYDGYIKRQRNELQH----- 59

Query: 284 VGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLAT 343
                Y   P       G+  + D                          +  S      
Sbjct: 60  -----YSLYPNPQGYGNGNDFLGDFNHTNLQIPTEP--------------EPESP----I 96

Query: 344 PLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWA 403
            L        GS             +   R+ V+            ++   +  T L W 
Sbjct: 97  KL---HTEAAGS---------YAITEPITRESVN------------IIDPRHNRTVLHWI 132

Query: 404 CRKGHVEIVDILL--------KAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
                 E  + L+         AGA+V+       TPL++A L     +V  L++   + 
Sbjct: 133 ASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADP 192

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLN---SGAYINIQDRSGDSNLIHAVKGGHRG--- 509
              +K   +AL  A  +  + + V +LN       I   DR+G + L+       R    
Sbjct: 193 TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVA 252

Query: 510 IVEALLKKYVDVDIPG--------KERKTAVYTAVEKGNVPILKLLLTAN-PDLEIATKD 560
             + L++K   VD  G         + +TA++ A +  N+PI+K L+     + +   +D
Sbjct: 253 SAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDED 312

Query: 561 GDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN 616
           G TP++ A +   +E +  LI + A + AVD    T   +A       IV++F R 
Sbjct: 313 GKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRC 368

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  198 bits (505), Expect = 1e-57
 Identities = 62/370 (16%), Positives = 116/370 (31%), Gaps = 50/370 (13%)

Query: 144 ENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYT 203
           E K         +   +L+ A+  G +             N   + +  P       G  
Sbjct: 24  EEKNRKNHQSITSSQHSLLEASYDGYI---------KRQRNELQHYSLYPNPQGYGNGND 74

Query: 204 DVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWA 263
            +      +       +      L   +  G       +  ++ ++     ++ + L W 
Sbjct: 75  FLGDFNHTNLQIPTEPEPESPIKLHTEA-AGSYAITEPITRESVNIID-PRHNRTVLHWI 132

Query: 264 AGRGYTEIVALL--------VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGAN 315
           A     E    L        +  GA VN  D     TPL+ A       +V  L+KAGA+
Sbjct: 133 ASNSSAEKSEDLIVHEAKECIAAGADVNAMDC-DENTPLMLAVLARRRRLVAYLMKAGAD 191

Query: 316 VDVAGLWAYMPLYSSALAD--------IFSEPGLA----------TPLTVGLYAKWGSGK 357
             +        L+ +A           + S               T L   +      G+
Sbjct: 192 PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTAL---MIVAHNEGR 248

Query: 358 SFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILL- 416
             +        K    +G    +  ++           G T L +A +  ++ IV  L+ 
Sbjct: 249 DQV-----ASAKLLVEKGAKVDYDGAA---RKDSEKYKGRTALHYAAQVSNMPIVKYLVG 300

Query: 417 KAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYE 476
           + G+N D       TP+++A      EVV  L++   +V A+D    TA  +A  + ++ 
Sbjct: 301 EKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHN 360

Query: 477 IAVLLLNSGA 486
           I  +      
Sbjct: 361 IVDIFDRCRP 370

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  194 bits (494), Expect = 4e-56
 Identities = 59/392 (15%), Positives = 113/392 (28%), Gaps = 59/392 (15%)

Query: 211 DHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTE 270
           +               L+ ASY G+       L   +                 G G   
Sbjct: 25  EKNRKNHQSITSSQHSLLEASYDGYIKRQRNELQHYSLYP---------NPQGYGNGNDF 75

Query: 271 IVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSS 330
           +              +       L      G   I + + +                   
Sbjct: 76  LGDFNHTNLQIPTEPEP-ESPIKLHTEA-AGSYAITEPITRES----------------- 116

Query: 331 ALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLV 390
              +I       T L    +    S        +  E K     G D             
Sbjct: 117 --VNIIDPRHNRTVL---HWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDC------- 164

Query: 391 MHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLE 450
                  TPL+ A       +V  L+KAGA+  +      + L  A       ++  +L 
Sbjct: 165 ----DENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLN 220

Query: 451 YKP---NVNALDKDGCTALTIACKDGYYE---IAVLLLNSGAYINI--------QDRSGD 496
                 ++  LD++G TAL I   +   +    A LL+  GA ++         +   G 
Sbjct: 221 STKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGR 280

Query: 497 SNLIHAVKGGHRGIVEALLKKY-VDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLE 555
           + L +A +  +  IV+ L+ +   + D   ++ KT +  A ++G + ++  L+     +E
Sbjct: 281 TALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVE 340

Query: 556 IATKDGDTPLLKAVKTRNLEAIQMLIDKKAKI 587
                  T    A    +   + +    + + 
Sbjct: 341 AVDATDHTARQLAQANNHHNIVDIFDRCRPER 372

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  172 bits (439), Expect = 2e-48
 Identities = 51/274 (18%), Positives = 87/274 (31%), Gaps = 37/274 (13%)

Query: 67  NLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRT 126
             + + +++               GN  +     T                         
Sbjct: 48  GYIKRQRNELQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPE-----------SPI 96

Query: 127 LQSYIAEDNLDSLQTFLENKRTVAD-DRDDNGGTALMFAAQKGKL--------SFVRELV 177
                A  +    +          +     +  T L + A                +E +
Sbjct: 97  KLHTEAAGSYAITEPITRES---VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECI 153

Query: 178 TRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTD 237
             GADVNA D D  +PL  A       + A L+  GAD    +    S L  A+      
Sbjct: 154 AAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFG 213

Query: 238 TVALLLDKN---ADVNAHGNYHISSLIWAAGRGYTEIVA---LLVKKGAKVNVGDKV--- 288
            +  +L+      D+       +++L+  A     + VA   LLV+KGAKV+        
Sbjct: 214 MMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKD 273

Query: 289 ----YGTTPLVWACRKGHVEIVDILL-KAGANVD 317
                G T L +A +  ++ IV  L+ + G+N D
Sbjct: 274 SEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKD 307

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  168 bits (428), Expect = 1e-46
 Identities = 50/339 (14%), Positives = 103/339 (30%), Gaps = 39/339 (11%)

Query: 3   QDDVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQR 62
                ++               G+  + +           P     +   L+  +A    
Sbjct: 50  IKRQRNELQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPI--KLHT-EAAGSY 106

Query: 63  STTRNLLDK--NKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEI---ATKTLPRSD 117
           + T  +  +  N     +  +T ++      +    + L+       I   A       D
Sbjct: 107 AITEPITRESVNIIDP-RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCD 165

Query: 118 SMVSLCYRTLQSYIA--EDNLDSLQTFLENKRTVAD--DRDDNGGTALMFAAQKGKLSFV 173
               L        +A        +   ++     AD    + +  +AL  AA       +
Sbjct: 166 ENTPL-------MLAVLARRRRLVAYLMKAG---ADPTIYNKSERSALHQAAANRDFGMM 215

Query: 174 RELV---TRGADVNAEDNDNWSPLTYAAREGYTDVCAE---LLDHGADL--------EHR 219
             ++       D+   D +  + L   A     D  A    L++ GA +        +  
Sbjct: 216 VYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275

Query: 220 DMGGWSPLMWASYKGHTDTVALLLDKN-ADVNAHGNYHISSLIWAAGRGYTEIVALLVKK 278
              G + L +A+   +   V  L+ +  ++ +       + ++ AA  G  E+V  L+++
Sbjct: 276 KYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ 335

Query: 279 GAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
           GA V   D     T    A    H  IVDI  +     +
Sbjct: 336 GASVEAVDA-TDHTARQLAQANNHHNIVDIFDRCRPERE 373

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  163 bits (414), Expect = 7e-45
 Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 26/261 (9%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           Y   P       G+  + D                   L     G+   + E +     N
Sbjct: 60  YSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAAGS-YAITEPITRESVN 118

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNS--------GAYINIQDRSGDSNLIHAVKGG 506
           +    +   T L     +   E +  L+          GA +N  D   ++ L+ AV   
Sbjct: 119 IID-PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLAR 177

Query: 507 HRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP---DLEIATKDGDT 563
            R +V  L+K   D  I  K  ++A++ A    +  ++  +L +     D+E   ++G T
Sbjct: 178 RRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMT 237

Query: 564 PLLKAVKTRNLEAI---QMLIDKKAKI--------TAVDKRGDTVLHIAMRARSKTIVEV 612
            L+        + +   ++L++K AK+         +   +G T LH A +  +  IV+ 
Sbjct: 238 ALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKY 297

Query: 613 FIRNPKNNILLYRPNKAGETP 633
            +    +N    + ++ G+TP
Sbjct: 298 LVGEKGSNK--DKQDEDGKTP 316

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  161 bits (409), Expect = 3e-44
 Identities = 47/254 (18%), Positives = 86/254 (33%), Gaps = 30/254 (11%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKP- 453
                L      G   I + + +   N+     +  T L      +  E  E L+ ++  
Sbjct: 93  ESPIKLHTEA-AGSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAK 150

Query: 454 -------NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGG 506
                  +VNA+D D  T L +A       +   L+ +GA   I ++S  S L  A    
Sbjct: 151 ECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANR 210

Query: 507 HRGIVEALLKKY---VDVDIPGKERKTAVYTAVEKGN---VPILKLLL--------TANP 552
             G++  +L       D++   +   TA+           V   KLL+            
Sbjct: 211 DFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAA 270

Query: 553 DLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK-AKITAVDKRGDTVLHIAMRARSKTIVE 611
             +     G T L  A +  N+  ++ L+ +K +     D+ G T + +A +     +V 
Sbjct: 271 RKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVM 330

Query: 612 VFI-----RNPKNN 620
             I         + 
Sbjct: 331 YLIQQGASVEAVDA 344

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  157 bits (400), Expect = 6e-43
 Identities = 39/210 (18%), Positives = 68/210 (32%), Gaps = 17/210 (8%)

Query: 125 RTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVN 184
                    +  D L  F      +  + +      L   A  G  +    +     ++ 
Sbjct: 62  LYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEA-AGSYAITEPITRESVNII 120

Query: 185 AEDNDNWSPLTYAAREGYTDVCAELLDH--------GADLEHRDMGGWSPLMWASYKGHT 236
            +   N + L + A     +   +L+ H        GAD+   D    +PLM A      
Sbjct: 121 -DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRR 179

Query: 237 DTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKK---GAKVNVGDKVYGTTP 293
             VA L+   AD   +     S+L  AA      ++  ++        +   D+  G T 
Sbjct: 180 RLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDR-NGMTA 238

Query: 294 LVWACRKGH---VEIVDILLKAGANVDVAG 320
           L+          V    +L++ GA VD  G
Sbjct: 239 LMIVAHNEGRDQVASAKLLVEKGAKVDYDG 268

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  142 bits (360), Expect = 2e-37
 Identities = 35/261 (13%), Positives = 70/261 (26%), Gaps = 30/261 (11%)

Query: 392 HLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEY 451
            ++     L+ A   G+++     L+  +           P           + +     
Sbjct: 33  SITSSQHSLLEASYDGYIKRQRNELQHYS---------LYPNPQGYGNGNDFLGDFNHTN 83

Query: 452 KPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIV 511
                  + +    L      G Y I   +      I    R   + L            
Sbjct: 84  LQIPTEPEPESPIKLHTEAA-GSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKS 141

Query: 512 EALLKKYV--------DVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDT 563
           E L+            DV+    +  T +  AV      ++  L+ A  D  I  K   +
Sbjct: 142 EDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERS 201

Query: 564 PLLKAVKTRNLEAIQMLIDKK---AKITAVDKRGDTVLHIAMRARSK---TIVEVFIR-- 615
            L +A   R+   +  +++       I  +D+ G T L I      +      ++ +   
Sbjct: 202 ALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKG 261

Query: 616 ---NPKNNILLYRPNKAGETP 633
              +             G T 
Sbjct: 262 AKVDYDGAARKDSEKYKGRTA 282

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  127 bits (322), Expect = 2e-32
 Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 15/176 (8%)

Query: 395 YGTTPLVWACRKGHVEIVDILL---KAGANVDVAGLYCWTPLLVATLGNFTE---VVELL 448
              + L  A       ++  +L   K   +++       T L++       +     +LL
Sbjct: 198 SERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLL 257

Query: 449 LEYKPNVN--------ALDKDGCTALTIACKDGYYEIA-VLLLNSGAYINIQDRSGDSNL 499
           +E    V+        +    G TAL  A +     I   L+   G+  + QD  G + +
Sbjct: 258 VEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPI 317

Query: 500 IHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLE 555
           + A + G   +V  L+++   V+       TA   A    +  I+ +     P+ E
Sbjct: 318 MLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPERE 373

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  195 bits (499), Expect = 8e-58
 Identities = 51/321 (15%), Positives = 98/321 (30%), Gaps = 52/321 (16%)

Query: 197 AAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYH 256
                 +      L    D    D+ G S   +A    +   V  LL+  A  N   N  
Sbjct: 6   RINTWKSKQLKSFL-SSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLENE- 63

Query: 257 ISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANV 316
              L  AA    T+IV +L+  G   +  D   G T L +A   G+++ V + +K    +
Sbjct: 64  -FPLHQAATLEDTKIVKILLFSGLDDSQFDD-KGNTALYYAVDSGNMQTVKLFVKKNWRL 121

Query: 317 DVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGV 376
              G                 + G  T                        + +F  +  
Sbjct: 122 MFYG-----------------KTGWKTSFYHA--VMLND---------VSIVSYFLSEIP 153

Query: 377 DPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLL-V 435
                           L+   + +    + GHV+++ +LL    + +      + P + +
Sbjct: 154 S------------TFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKL 201

Query: 436 ATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSG 495
           A      E+++ L +Y  N+        +A          EIA +++           + 
Sbjct: 202 AIDNKDIEMLQALFKYDINIY-------SANLENVLLDDAEIAKMIIEKHVEYKSDSYTK 254

Query: 496 DSNLIHAVKGGHRGIVEALLK 516
           D +++   K          L+
Sbjct: 255 DLDIVKNNKLDEIISKNKELR 275

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  172 bits (438), Expect = 4e-49
 Identities = 30/169 (17%), Positives = 51/169 (30%), Gaps = 2/169 (1%)

Query: 156 NGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGAD 215
                L  AA       V+ L+  G D +  D+   + L YA   G        +     
Sbjct: 61  ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR 120

Query: 216 LEHRDMGGWS-PLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVAL 274
           L      GW      A        V+  L +            S +      G+ +++ L
Sbjct: 121 LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILL-SCIHITIKNGHVDMMIL 179

Query: 275 LVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWA 323
           L+      N  + +     +  A     +E++  L K   N+  A L  
Sbjct: 180 LLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANLEN 228

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  169 bits (430), Expect = 4e-48
 Identities = 38/229 (16%), Positives = 73/229 (31%), Gaps = 10/229 (4%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
              PL  A      +IV ILL +G +         T L  A      + V+L ++    +
Sbjct: 62  NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRL 121

Query: 456 NALDKDG-CTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
               K G  T+   A       I    L+             S +   +K GH  ++  L
Sbjct: 122 MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP-STFDLAILLSCIHITIKNGHVDMMILL 180

Query: 515 LKKYVDVDIPGKERKTAV-YTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRN 573
           L      +             A++  ++ +L+ L   +        +  +  L+ V   +
Sbjct: 181 LDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDI-------NIYSANLENVLLDD 233

Query: 574 LEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNIL 622
            E  +M+I+K  +  +     D  +    +          +R    N +
Sbjct: 234 AEIAKMIIEKHVEYKSDSYTKDLDIVKNNKLDEIISKNKELRLMYVNCV 282

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  169 bits (430), Expect = 5e-48
 Identities = 44/321 (13%), Positives = 81/321 (25%), Gaps = 90/321 (28%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
           K D  G S   +A+   +  +V  LL      ++                          
Sbjct: 26  KADVHGHSASYYAIADNNVRLVCTLLNAGALKNL-------------------------- 59

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQ 128
                     E +  ++ A    +  I+K+LL +  D                       
Sbjct: 60  ---------LENEFPLHQAATLEDTKIVKILLFSGLDDSQ-------------------- 90

Query: 129 SYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDN 188
                                    DD G TAL +A   G +  V+  V +   +     
Sbjct: 91  ------------------------FDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGK 126

Query: 189 DNWS-PLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNA 247
             W     +A       + +  L              S +      GH D + LLLD   
Sbjct: 127 TGWKTSFYHAVMLNDVSIVSYFLSEIPSTF-DLAILLSCIHITIKNGHVDMMILLLDYMT 185

Query: 248 DVNAHGNY-HISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIV 306
             N + +   I  +  A      E++  L K    +         +  +        EI 
Sbjct: 186 STNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIY--------SANLENVLLDDAEIA 237

Query: 307 DILLKAGANVDVAGLWAYMPL 327
            ++++             + +
Sbjct: 238 KMIIEKHVEYKSDSYTKDLDI 258

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  158 bits (401), Expect = 5e-44
 Identities = 39/223 (17%), Positives = 80/223 (35%), Gaps = 8/223 (3%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G             + +     +  +   A ++  +    A   N   +V  LL      
Sbjct: 1   GMDLS--RINTWKSKQL-KSFLSSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK 57

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           N    +    L  A      +I  +LL SG   +  D  G++ L +AV  G+   V+  +
Sbjct: 58  NL--LENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFV 115

Query: 516 KKYVDVDIPGKE-RKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
           KK   +   GK   KT+ Y AV   +V I+   L+  P          + +   +K  ++
Sbjct: 116 KKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF-DLAILLSCIHITIKNGHV 174

Query: 575 EAIQMLIDKKAKITAVDKRGDT-VLHIAMRARSKTIVEVFIRN 616
           + + +L+D        +       + +A+  +   +++   + 
Sbjct: 175 DMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKY 217

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  156 bits (396), Expect = 3e-43
 Identities = 35/160 (21%), Positives = 53/160 (33%), Gaps = 4/160 (2%)

Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L       K   ++  +    D    D    S   YA  +    +   LL+ GA   
Sbjct: 1   GMDLSRIN-TWKSKQLKSFL-SSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKN 58

Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
             +     PL  A+    T  V +LL    D +   +   ++L +A   G  + V L VK
Sbjct: 59  LLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVK 116

Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
           K  ++    K    T    A     V IV   L    +  
Sbjct: 117 KNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF 156

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  187 bits (478), Expect = 2e-55
 Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 9/231 (3%)

Query: 395 YGTTPLVWACRKGHVEIVDILL----KAGANVDVAGLYCWTPLLVATLGNFTEVVELLLE 450
            G TPL  A  +G++  V  L+    + G  +D+      TPL +A +     VV LL+ 
Sbjct: 8   DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 67

Query: 451 YKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAY----INIQDRSGDSNLIHAVKGG 506
              +  ALD+ G TA  +AC+         LL+S A     +  ++  G + L  AV   
Sbjct: 68  AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 127

Query: 507 HRGIVEALLKKYVDVDIP-GKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPL 565
            +  V+ LL++  D+D    K  ++ +  AVE  ++ +++LLL    ++      G + L
Sbjct: 128 CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSAL 187

Query: 566 LKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN 616
             A     L  ++ L+   A  +  +   DT L +A   R   I+      
Sbjct: 188 HSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATR 238

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  176 bits (450), Expect = 2e-51
 Identities = 66/314 (21%), Positives = 112/314 (35%), Gaps = 83/314 (26%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVD--VDIPGKVRKLSDALNVTDANDQRSTTR 66
           + D  GD+ L  AV  G+   V  L+  +     ++           ++ +         
Sbjct: 4   RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL-----------DIYN--------- 43

Query: 67  NLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRT 126
                        R+T ++ AV      +++LL+TA                        
Sbjct: 44  -----------NLRQTPLHLAVITTLPSVVRLLVTAGASPMA------------------ 74

Query: 127 LQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGA----D 182
                                      D +G TA   A +    + +R L+   A    D
Sbjct: 75  --------------------------LDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLD 108

Query: 183 VNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDM-GGWSPLMWASYKGHTDTVAL 241
           + A + D  + L  A      +    LL+ GAD++  D+  G SPL+ A        V L
Sbjct: 109 LEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQL 168

Query: 242 LLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKG 301
           LL   A+VNA      S+L  A+GRG   +V  LV+ GA  ++ +  +  TPL+ A  + 
Sbjct: 169 LLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNC-HNDTPLMVARSRR 227

Query: 302 HVEIVDILLKAGAN 315
            ++I+       A+
Sbjct: 228 VIDILRGKATRPAS 241

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  176 bits (450), Expect = 2e-51
 Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 8/190 (4%)

Query: 150 ADDRDDNGGTALMFAAQKGKLSFVRELV----TRGADVNAEDNDNWSPLTYAAREGYTDV 205
           A   D++G T L  A  +G L  V  LV      G +++  +N   +PL  A       V
Sbjct: 2   ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSV 61

Query: 206 CAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNA----DVNAHGNYHISSLI 261
              L+  GA     D  G +    A        +  LLD  A    D+ A     +++L 
Sbjct: 62  VRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALH 121

Query: 262 WAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGL 321
            A      E V LL+++GA ++  D   G +PL+ A     + +V +LL+ GANV+    
Sbjct: 122 VAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMY 181

Query: 322 WAYMPLYSSA 331
                L+S++
Sbjct: 182 SGSSALHSAS 191

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  176 bits (449), Expect = 3e-51
 Identities = 53/172 (30%), Positives = 75/172 (43%), Gaps = 6/172 (3%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
           D  ++   T L  A      S VR LVT GA   A D    +    A           LL
Sbjct: 40  DIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALL 99

Query: 211 DHGA----DLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNA-HGNYHISSLIWAAG 265
           D  A    DLE R+  G + L  A      +TV LLL++ AD++A       S LI A  
Sbjct: 100 DSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVE 159

Query: 266 RGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
                +V LL++ GA VN      G++ L  A  +G + +V  L+++GA+  
Sbjct: 160 NNSLSMVQLLLQHGANVNAQMY-SGSSALHSASGRGLLPLVRTLVRSGADSS 210

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  165 bits (420), Expect = 4e-47
 Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 5/196 (2%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEY--- 451
              TPL  A       +V +L+ AGA+      +  T   +A        +  LL+    
Sbjct: 45  LRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAP 104

Query: 452 -KPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDR-SGDSNLIHAVKGGHRG 509
              ++ A + DG TAL +A      E   LLL  GA I+  D  SG S LIHAV+     
Sbjct: 105 GTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLS 164

Query: 510 IVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAV 569
           +V+ LL+   +V+       +A+++A  +G +P+++ L+ +  D  +     DTPL+ A 
Sbjct: 165 MVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVAR 224

Query: 570 KTRNLEAIQMLIDKKA 585
             R ++ ++    + A
Sbjct: 225 SRRVIDILRGKATRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  141 bits (359), Expect = 1e-38
 Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 7/164 (4%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGA----NVDVAGLYCWTPLLVATLGNFTEVVELLLE 450
           +G T    AC       +  LL + A    +++       T L VA      E V+LLLE
Sbjct: 78  HGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLE 137

Query: 451 YKPNVNALD-KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRG 509
              +++A+D K G + L  A ++    +  LLL  GA +N Q  SG S L  A   G   
Sbjct: 138 RGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLP 197

Query: 510 IVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLT--AN 551
           +V  L++   D  +      T +  A  +  + IL+   T  A+
Sbjct: 198 LVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPAS 241

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  124 bits (315), Expect = 2e-32
 Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 9/169 (5%)

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLN----SGAYINIQDRSGDSNLIHAVKGGHRGI 510
               D+DG T L IA   G       L+N     G  ++I +    + L  AV      +
Sbjct: 2   ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSV 61

Query: 511 VEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLL----TANPDLEIATKDGDTPLL 566
           V  L+          +  +TA + A E  +   L+ LL        DLE    DG T L 
Sbjct: 62  VRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALH 121

Query: 567 KAVKTRNLEAIQMLIDKKAKITAVD-KRGDTVLHIAMRARSKTIVEVFI 614
            AV T   E +Q+L+++ A I AVD K G + L  A+   S ++V++ +
Sbjct: 122 VAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLL 170

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  184 bits (470), Expect = 4e-55
 Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 2/165 (1%)

Query: 154 DDNGGTALMFAAQKGKLSFVRELVTRGA-DVNAEDNDNWSPLTYAAREGYTDVCAELLDH 212
                  +    ++G    VR  +     D+N  D+  +SPL +A REG + V   L+  
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR 61

Query: 213 GADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIV 272
           GA +   + G  +PL  A+  GH D V  LL   AD+NA   +    L +A   G  ++ 
Sbjct: 62  GARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVA 121

Query: 273 ALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
             LV  GA V++ +K YG  P+  A       + +   K G N++
Sbjct: 122 EDLVANGALVSICNK-YGEMPVDKAKAPLRELLRERAEKMGQNLN 165

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  150 bits (381), Expect = 2e-42
 Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 2/146 (1%)

Query: 187 DNDNWSPLTYAAREGYTDVCAELLDHGA-DLEHRDMGGWSPLMWASYKGHTDTVALLLDK 245
             +    +    REG        LD+   DL   D  G+SPL WA  +G +  V +L+ +
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR 61

Query: 246 NADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEI 305
            A +N       + L  AA  G+ +IV  L++  A +N  ++ +G  PL +AC  G  ++
Sbjct: 62  GARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNE-HGNVPLHYACFWGQDQV 120

Query: 306 VDILLKAGANVDVAGLWAYMPLYSSA 331
            + L+  GA V +   +  MP+  + 
Sbjct: 121 AEDLVANGALVSICNKYGEMPVDKAK 146

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  150 bits (381), Expect = 2e-42
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 7/170 (4%)

Query: 133 EDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWS 192
           E N  +++ +L+N     +  DD+G + L +A ++G+ + V  L+ RGA +N  +  + +
Sbjct: 15  EGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDT 74

Query: 193 PLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAH 252
           PL  AA  G+ D+  +LL + AD+   +  G  PL +A + G       L+   A V+  
Sbjct: 75  PLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSIC 134

Query: 253 GNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGH 302
             Y    +  A       +     K G  +N         P      KG 
Sbjct: 135 NKYGEMPVDKAKAPLRELLRERAEKMGQNLN-------RIPYKDTFWKGT 177

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  142 bits (361), Expect = 1e-39
 Identities = 38/174 (21%), Positives = 66/174 (37%), Gaps = 6/174 (3%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGAN-VDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
               +   CR+G+   V + L    N ++    + ++PL  A     + VVE+L+     
Sbjct: 5   FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR 64

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           +N +++   T L +A   G+ +I   LL   A IN  +  G+  L +A   G   + E L
Sbjct: 65  INVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDL 124

Query: 515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLT--ANP---DLEIATKDGDT 563
           +     V I  K  +  V  A       + +       N      +     G T
Sbjct: 125 VANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKDTFWKGTT 178

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  137 bits (347), Expect = 1e-37
 Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 6/146 (4%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           +G +PL WACR+G   +V++L+  GA ++V      TPL +A      ++V+ LL+YK +
Sbjct: 38  HGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKAD 97

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           +NA+++ G   L  AC  G  ++A  L+ +GA ++I ++ G+  +  A       + E  
Sbjct: 98  INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERA 157

Query: 515 LKKYVDVDIPGKERKTAVYTAVEKGN 540
            K   +++      +        KG 
Sbjct: 158 EKMGQNLN------RIPYKDTFWKGT 177

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 88.3 bits (220), Expect = 2e-20
 Identities = 34/231 (14%), Positives = 69/231 (29%), Gaps = 61/231 (26%)

Query: 14  GDSN----LIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLL 69
           G       +    + G+   V   L                   ++           N  
Sbjct: 1   GSPEFMDDIFTQCREGNAVAVRLWLDN--------------TENDL-----------NQG 35

Query: 70  DKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQS 129
           D +         + ++ A  +G   ++++L+     + +  +          L       
Sbjct: 36  DDHG-------FSPLHWACREGRSAVVEMLIMRGARINVMNR-----GDDTPL------- 76

Query: 130 YIA--EDNLDSLQTFLENKRTVAD--DRDDNGGTALMFAAQKGKLSFVRELVTRGADVNA 185
           ++A    + D +Q  L+ K   AD    +++G   L +A   G+     +LV  GA V+ 
Sbjct: 77  HLAASHGHRDIVQKLLQYK---ADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI 133

Query: 186 EDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHT 236
            +     P+  A       +       G +L         P     +KG T
Sbjct: 134 CNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRI------PYKDTFWKGTT 178

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 50.1 bits (121), Expect = 2e-07
 Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 557 ATKDGDTPLLKAVKTRNLEAIQMLIDKKA-KITAVDKRGDTVLHIAMRARSKTIVEVFI 614
            + +    +    +  N  A+++ +D     +   D  G + LH A R     +VE+ I
Sbjct: 1   GSPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLI 59

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 44.3 bits (106), Expect = 2e-05
 Identities = 25/199 (12%), Positives = 46/199 (23%), Gaps = 84/199 (42%)

Query: 5   DVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRST 64
            ++   +R  D+ L  A   GHR IV+ LL+   D++                       
Sbjct: 64  RINVM-NRGDDTPLHLAASHGHRDIVQKLLQYKADINA---------------------- 100

Query: 65  TRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCY 124
                  N+H         ++ A   G   + + L+     + I                
Sbjct: 101 ------VNEH-----GNVPLHYACFWGQDQVAEDLVANGALVSI---------------- 133

Query: 125 RTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVN 184
                                        +  G   +  A    +          G ++N
Sbjct: 134 ----------------------------CNKYGEMPVDKAKAPLRELLRERAEKMGQNLN 165

Query: 185 AEDNDNWSPLTYAAREGYT 203
                   P      +G T
Sbjct: 166 R------IPYKDTFWKGTT 178

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  180 bits (460), Expect = 1e-52
 Identities = 58/193 (30%), Positives = 89/193 (46%), Gaps = 2/193 (1%)

Query: 126 TLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNA 185
           T  S   ED    +  F+    ++ +  D  G TAL  AA+  +    + L+   AD N 
Sbjct: 26  TGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANI 85

Query: 186 EDNDNWSPLTYAAREGYTDVCAELLDHGA-DLEHRDMGGWSPLMWASYKGHTDTVALLLD 244
           +DN   +PL  A       V   L+ + A DL+ R   G +PL+ A+       +  L++
Sbjct: 86  QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLIN 145

Query: 245 KNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVE 304
            +ADVNA  +   S+L WAA     +   +L+K GA  ++ +     TPL  A R+G  E
Sbjct: 146 SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN-REETPLFLAAREGSYE 204

Query: 305 IVDILLKAGANVD 317
              +LL   AN D
Sbjct: 205 TAKVLLDHFANRD 217

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  174 bits (444), Expect = 2e-50
 Identities = 51/235 (21%), Positives = 92/235 (39%), Gaps = 15/235 (6%)

Query: 395 YGTTPLVWACRKG-------------HVEIVDILLKAGANV-DVAGLYCWTPLLVATLGN 440
            G TPL+ A   G                ++   +  GA++ +       T L +A   +
Sbjct: 9   DGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYS 68

Query: 441 FTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAY-INIQDRSGDSNL 499
            ++  + LLE   + N  D  G T L  A       +  +L+ + A  ++ +   G + L
Sbjct: 69  RSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPL 128

Query: 500 IHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATK 559
           I A +    G++E L+  + DV+      K+A++ A    NV    +LL    + ++   
Sbjct: 129 ILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN 188

Query: 560 DGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI 614
             +TPL  A +  + E  ++L+D  A     D        IA       IV +  
Sbjct: 189 REETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLD 243

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  168 bits (427), Expect = 6e-48
 Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 1/194 (0%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYK-P 453
            G T L  A R    +    LL+A A+ ++      TPL  A   +   V ++L+  +  
Sbjct: 56  TGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT 115

Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEA 513
           +++A   DG T L +A +     +   L+NS A +N  D  G S L  A    +      
Sbjct: 116 DLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVV 175

Query: 514 LLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRN 573
           LLK   + D+     +T ++ A  +G+    K+LL    + +I       P   A +  +
Sbjct: 176 LLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 235

Query: 574 LEAIQMLIDKKAKI 587
            + +++L  +    
Sbjct: 236 HDIVRLLDLEHHHH 249

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  167 bits (426), Expect = 8e-48
 Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 2/166 (1%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGA-DVNAEDNDNWSPLTYAAREGYTDVCAEL 209
           + +D+ G T L  A         + L+   A D++A  +D  +PL  AAR     +  +L
Sbjct: 84  NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDL 143

Query: 210 LDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYT 269
           ++  AD+   D  G S L WA+   + D   +LL   A+ +   N   + L  AA  G  
Sbjct: 144 INSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSY 203

Query: 270 EIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGAN 315
           E   +L+   A  ++ D      P   A  + H +IV +L     +
Sbjct: 204 ETAKVLLDHFANRDITDH-MDRLPRDIAQERMHHDIVRLLDLEHHH 248

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  160 bits (407), Expect = 3e-45
 Identities = 50/182 (27%), Positives = 77/182 (42%), Gaps = 16/182 (8%)

Query: 151 DDRDDNGGTALMFAAQKGK-------------LSFVRELVTRGADV-NAEDNDNWSPLTY 196
           + R  +G T LM A+  G               + + + + +GA + N  D    + L  
Sbjct: 4   NVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHL 63

Query: 197 AAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNA-DVNAHGNY 255
           AAR   +D    LL+  AD   +D  G +PL  A          +L+   A D++A  + 
Sbjct: 64  AARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHD 123

Query: 256 HISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGAN 315
             + LI AA      ++  L+   A VN  D   G + L WA    +V+   +LLK GAN
Sbjct: 124 GTTPLILAARLAVEGMLEDLINSHADVNAVDD-LGKSALHWAAAVNNVDAAVVLLKNGAN 182

Query: 316 VD 317
            D
Sbjct: 183 KD 184

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  152 bits (386), Expect = 3e-42
 Identities = 58/271 (21%), Positives = 99/271 (36%), Gaps = 44/271 (16%)

Query: 14  GDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNK 73
           G        +     ++   + +   +             N TD                
Sbjct: 23  GLETGNSEEEEDAPAVISDFIYQGASLH------------NQTD---------------- 54

Query: 74  HKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRT-LQSYIA 132
               +  +TA++ A         K LL A+ D  I                RT L + ++
Sbjct: 55  ----RTGETALHLAARYSRSDAAKRLLEASADANIQDNM-----------GRTPLHAAVS 99

Query: 133 EDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWS 192
            D     Q  + N+ T  D R  +G T L+ AA+      + +L+   ADVNA D+   S
Sbjct: 100 ADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKS 159

Query: 193 PLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAH 252
            L +AA     D    LL +GA+ + ++    +PL  A+ +G  +T  +LLD  A+ +  
Sbjct: 160 ALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDIT 219

Query: 253 GNYHISSLIWAAGRGYTEIVALLVKKGAKVN 283
            +        A  R + +IV LL  +    +
Sbjct: 220 DHMDRLPRDIAQERMHHDIVRLLDLEHHHHH 250

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  135 bits (342), Expect = 4e-36
 Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 16/151 (10%)

Query: 182 DVNAEDNDNWSPLTYAAREG-------------YTDVCAELLDHGADLE-HRDMGGWSPL 227
           DVN    D ++PL  A+  G                V ++ +  GA L    D  G + L
Sbjct: 2   DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETAL 61

Query: 228 MWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAK-VNVGD 286
             A+    +D    LL+ +AD N   N   + L  A       +  +L++  A  ++   
Sbjct: 62  HLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM 121

Query: 287 KVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
              GTTPL+ A R     +++ L+ + A+V+
Sbjct: 122 H-DGTTPLILAARLAVEGMLEDLINSHADVN 151

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  121 bits (307), Expect = 2e-31
 Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 28/200 (14%)

Query: 454 NVNALDKDGCTALTIACKDGYY-------------EIAVLLLNSGAYI-NIQDRSGDSNL 499
           +VN    DG T L IA   G                +    +  GA + N  DR+G++ L
Sbjct: 2   DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETAL 61

Query: 500 IHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTA-NPDLEIAT 558
             A +       + LL+   D +I     +T ++ AV      + ++L+     DL+   
Sbjct: 62  HLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM 121

Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI---- 614
            DG TPL+ A +      ++ LI+  A + AVD  G + LH A    +     V +    
Sbjct: 122 HDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA 181

Query: 615 -RNPKNNILLYRPNKAGETP 633
            ++ +NN          ETP
Sbjct: 182 NKDMQNNR--------EETP 193

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  104 bits (262), Expect = 3e-25
 Identities = 26/97 (26%), Positives = 43/97 (44%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            G + L WA    +V+   +LLK GAN D+      TPL +A      E  ++LL++  N
Sbjct: 156 LGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN 215

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQ 491
            +  D        IA +  +++I  LL     + +  
Sbjct: 216 RDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHHHHH 252

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 71.3 bits (176), Expect = 5e-14
 Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 22/121 (18%)

Query: 215 DLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVAL 274
           D+  R   G++PLM AS  G                        +           +++ 
Sbjct: 2   DVNVRGPDGFTPLMIASCSGGGLE--------------------TGNSEEEEDAPAVISD 41

Query: 275 LVKKGAKV-NVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALA 333
            + +GA + N  D+  G T L  A R    +    LL+A A+ ++       PL+++  A
Sbjct: 42  FIYQGASLHNQTDR-TGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSA 100

Query: 334 D 334
           D
Sbjct: 101 D 101

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  177 bits (452), Expect = 1e-52
 Identities = 63/158 (39%), Positives = 89/158 (56%), Gaps = 1/158 (0%)

Query: 154 DDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHG 213
             + G  L+ AA+ G+   VR L+  GADVNAED   W+PL  AA  G+ ++   LL +G
Sbjct: 11  GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNG 70

Query: 214 ADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVA 273
           AD+   D  G +PL  A+  GH + V +LL   ADVNA+     + L  AA  G+ EIV 
Sbjct: 71  ADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVE 130

Query: 274 LLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK 311
           +L+K GA VN  DK +G T    +   G+ ++ +IL K
Sbjct: 131 VLLKNGADVNAQDK-FGKTAFDISIDNGNEDLAEILQK 167

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  155 bits (394), Expect = 2e-44
 Identities = 60/154 (38%), Positives = 83/154 (53%), Gaps = 2/154 (1%)

Query: 179 RGADVNAE-DNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTD 237
           RG+  +    +D    L  AAR G  D    L+ +GAD+   D  GW+PL  A++ GH +
Sbjct: 2   RGSHHHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLE 61

Query: 238 TVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWA 297
            V +LL   ADVNA  +  ++ L  AA  G+ EIV +L+K GA VN  D   G TPL  A
Sbjct: 62  IVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDM-EGHTPLHLA 120

Query: 298 CRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSA 331
              GH+EIV++LLK GA+V+    +       S 
Sbjct: 121 AMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISI 154

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  144 bits (365), Expect = 3e-40
 Identities = 59/161 (36%), Positives = 83/161 (51%)

Query: 388 VLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVEL 447
               H S     L+ A R G  + V IL+  GA+V+      WTPL +A      E+VE+
Sbjct: 6   HHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEV 65

Query: 448 LLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGH 507
           LL+   +VNA+D  G T L +A   G+ EI  +LL +GA +N  D  G + L  A   GH
Sbjct: 66  LLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGH 125

Query: 508 RGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLL 548
             IVE LLK   DV+   K  KTA   +++ GN  + ++L 
Sbjct: 126 LEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  137 bits (349), Expect = 5e-38
 Identities = 46/126 (36%), Positives = 66/126 (52%)

Query: 153 RDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDH 212
            D +G T L  AA  G L  V  L+  GADVNA D+   +PL  AA  G+ ++   LL +
Sbjct: 43  EDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKN 102

Query: 213 GADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIV 272
           GAD+   DM G +PL  A+  GH + V +LL   ADVNA   +  ++   +   G  ++ 
Sbjct: 103 GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLA 162

Query: 273 ALLVKK 278
            +L K 
Sbjct: 163 EILQKL 168

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  133 bits (337), Expect = 2e-36
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 7/169 (4%)

Query: 413 DILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKD 472
                 G+++          LL A      + V +L+    +VNA D  G T L +A  +
Sbjct: 5   HHHHHHGSDL-------GKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFN 57

Query: 473 GYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAV 532
           G+ EI  +LL +GA +N  D +G + L  A   GH  IVE LLK   DV+    E  T +
Sbjct: 58  GHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPL 117

Query: 533 YTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLI 581
           + A   G++ I+++LL    D+    K G T    ++   N +  ++L 
Sbjct: 118 HLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  129 bits (327), Expect = 5e-35
 Identities = 49/123 (39%), Positives = 71/123 (57%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            G TPL  A   GH+EIV++LLK GA+V+       TPL +A L    E+VE+LL+   +
Sbjct: 46  SGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGAD 105

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           VNA D +G T L +A   G+ EI  +LL +GA +N QD+ G +    ++  G+  + E L
Sbjct: 106 VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165

Query: 515 LKK 517
            K 
Sbjct: 166 QKL 168

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  110 bits (279), Expect = 1e-28
 Identities = 49/229 (21%), Positives = 73/229 (31%), Gaps = 77/229 (33%)

Query: 18  LIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSL 77
           L+ A + G    V  L+    DV             N  D                    
Sbjct: 18  LLEAARAGRDDEVRILMANGADV-------------NAED-------------------- 44

Query: 78  KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLD 137
               T ++ A   G++ I+++LL    D+                               
Sbjct: 45  ASGWTPLHLAAFNGHLEIVEVLLKNGADVNA----------------------------- 75

Query: 138 SLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYA 197
                           D  G T L  AA  G L  V  L+  GADVNA D +  +PL  A
Sbjct: 76  ---------------VDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLA 120

Query: 198 AREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKN 246
           A  G+ ++   LL +GAD+  +D  G +    +   G+ D   +L   N
Sbjct: 121 AMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 92.0 bits (230), Expect = 6e-22
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 1/133 (0%)

Query: 485 GAYINIQDRS-GDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPI 543
           G++ +    S     L+ A + G    V  L+    DV+       T ++ A   G++ I
Sbjct: 3   GSHHHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEI 62

Query: 544 LKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMR 603
           +++LL    D+      G TPL  A    +LE +++L+   A + A D  G T LH+A  
Sbjct: 63  VEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAM 122

Query: 604 ARSKTIVEVFIRN 616
                IVEV ++N
Sbjct: 123 FGHLEIVEVLLKN 135

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 70.9 bits (175), Expect = 1e-14
 Identities = 44/202 (21%), Positives = 60/202 (29%), Gaps = 78/202 (38%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
             D SG + L  A   GH  IVE LLK   DV+                           
Sbjct: 42  AEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNA-------------------------- 75

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQ 128
              +         T +  A   G++ I+++LL    D+                      
Sbjct: 76  --VDHAG-----MTPLRLAALFGHLEIVEVLLKNGADVNA-------------------- 108

Query: 129 SYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDN 188
                                    D  G T L  AA  G L  V  L+  GADVNA+D 
Sbjct: 109 ------------------------NDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDK 144

Query: 189 DNWSPLTYAAREGYTDVCAELL 210
              +    +   G  D+ AE+L
Sbjct: 145 FGKTAFDISIDNGNEDL-AEIL 165

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  178 bits (454), Expect = 3e-52
 Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 2/199 (1%)

Query: 134 DNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSP 193
           D    +  F+    ++ +  D  G TAL  AA+  +    + L+   AD N +DN   +P
Sbjct: 2   DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTP 61

Query: 194 LTYAAREGYTDVCAELLDHGA-DLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAH 252
           L  A       V   L+ + A DL+ R   G +PL+ A+       +  L++ +ADVNA 
Sbjct: 62  LHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAV 121

Query: 253 GNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKA 312
            +   S+L WAA     +   +L+K GA  ++ +     TPL  A R+G  E   +LL  
Sbjct: 122 DDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN-REETPLFLAAREGSYETAKVLLDH 180

Query: 313 GANVDVAGLWAYMPLYSSA 331
            AN D+      +P   + 
Sbjct: 181 FANRDITDHMDRLPRDIAQ 199

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  171 bits (435), Expect = 2e-49
 Identities = 45/210 (21%), Positives = 85/210 (40%), Gaps = 2/210 (0%)

Query: 407 GHVEIVDILLKAGANV-DVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTA 465
               ++   +  GA++ +       T L +A   + ++  + LLE   + N  D  G T 
Sbjct: 2   DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTP 61

Query: 466 LTIACKDGYYEIAVLLLNSGAY-INIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIP 524
           L  A       +  +L+ + A  ++ +   G + LI A +    G++E L+  + DV+  
Sbjct: 62  LHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAV 121

Query: 525 GKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK 584
               K+A++ A    NV    +LL    + ++     +TPL  A +  + E  ++L+D  
Sbjct: 122 DDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF 181

Query: 585 AKITAVDKRGDTVLHIAMRARSKTIVEVFI 614
           A     D        IA       IV +  
Sbjct: 182 ANRDITDHMDRLPRDIAQERMHHDIVRLLD 211

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  169 bits (432), Expect = 5e-49
 Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 2/170 (1%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGA-DVNAEDNDNWSPLTYAAREGYTDVCAEL 209
           + +D+ G T L  A         + L+   A D++A  +D  +PL  AAR     +  +L
Sbjct: 52  NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDL 111

Query: 210 LDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYT 269
           ++  AD+   D  G S L WA+   + D   +LL   A+ +   N   + L  AA  G  
Sbjct: 112 INSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSY 171

Query: 270 EIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVA 319
           E   +L+   A  ++ D      P   A  + H +IV +L +        
Sbjct: 172 ETAKVLLDHFANRDITDH-MDRLPRDIAQERMHHDIVRLLDEYNLVRSPQ 220

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  166 bits (424), Expect = 7e-48
 Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 1/194 (0%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYK-P 453
            G T L  A R    +    LL+A A+ ++      TPL  A   +   V ++L+  +  
Sbjct: 24  TGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT 83

Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEA 513
           +++A   DG T L +A +     +   L+NS A +N  D  G S L  A    +      
Sbjct: 84  DLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVV 143

Query: 514 LLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRN 573
           LLK   + D+     +T ++ A  +G+    K+LL    + +I       P   A +  +
Sbjct: 144 LLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 203

Query: 574 LEAIQMLIDKKAKI 587
            + +++L +     
Sbjct: 204 HDIVRLLDEYNLVR 217

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  153 bits (390), Expect = 5e-43
 Identities = 57/262 (21%), Positives = 95/262 (36%), Gaps = 46/262 (17%)

Query: 24  GGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSLKERKTA 83
           G    ++   + +   +             N TD                    +  +TA
Sbjct: 1   GDAPAVISDFIYQGASLH------------NQTD--------------------RTGETA 28

Query: 84  VYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIA--EDNLDSLQT 141
           ++ A         K LL A+ D  I             L       + A   D     Q 
Sbjct: 29  LHLAARYSRSDAAKRLLEASADANIQDN-----MGRTPL-------HAAVSADAQGVFQI 76

Query: 142 FLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREG 201
            + N+ T  D R  +G T L+ AA+      + +L+   ADVNA D+   S L +AA   
Sbjct: 77  LIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVN 136

Query: 202 YTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLI 261
             D    LL +GA+ + ++    +PL  A+ +G  +T  +LLD  A+ +   +       
Sbjct: 137 NVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRD 196

Query: 262 WAAGRGYTEIVALLVKKGAKVN 283
            A  R + +IV LL +     +
Sbjct: 197 IAQERMHHDIVRLLDEYNLVRS 218

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  143 bits (363), Expect = 2e-39
 Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 7/189 (3%)

Query: 439 GNFTEVVELLLEYKPNV-NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDS 497
           G+   V+   +    ++ N  D+ G TAL +A +    + A  LL + A  NIQD  G +
Sbjct: 1   GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRT 60

Query: 498 NLIHAVKGGHRGIVEALL-KKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEI 556
            L  AV    +G+ + L+  +  D+D    +  T +  A       +L+ L+ ++ D+  
Sbjct: 61  PLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA 120

Query: 557 ATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI-- 614
               G + L  A    N++A  +L+   A     + R +T L +A R  S    +V +  
Sbjct: 121 VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH 180

Query: 615 ---RNPKNN 620
              R+  ++
Sbjct: 181 FANRDITDH 189

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  103 bits (260), Expect = 3e-25
 Identities = 26/95 (27%), Positives = 42/95 (44%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            G + L WA    +V+   +LLK GAN D+      TPL +A      E  ++LL++  N
Sbjct: 124 LGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN 183

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYIN 489
            +  D        IA +  +++I  LL       +
Sbjct: 184 RDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 64.0 bits (157), Expect = 9e-12
 Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 3/96 (3%)

Query: 539 GNVPILKLLLTANPDLEIAT-KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTV 597
               ++   +     L   T + G+T L  A +    +A + L++  A     D  G T 
Sbjct: 2   DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTP 61

Query: 598 LHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP 633
           LH A+ A ++ + ++ IRN   ++        G TP
Sbjct: 62  LHAAVSADAQGVFQILIRNRATDL--DARMHDGTTP 95

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 57.4 bits (140), Expect = 2e-09
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 267 GYTEIVALLVKKGAKV-NVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYM 325
               +++  + +GA + N  D+  G T L  A R    +    LL+A A+ ++       
Sbjct: 2   DAPAVISDFIYQGASLHNQTDR-TGETALHLAARYSRSDAAKRLLEASADANIQDNMGRT 60

Query: 326 PLYSSALAD 334
           PL+++  AD
Sbjct: 61  PLHAAVSAD 69

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 46.2 bits (111), Expect = 9e-06
 Identities = 30/194 (15%), Positives = 68/194 (35%), Gaps = 31/194 (15%)

Query: 5   DVSSKRDRSGDSNLIHAVKGGHRGIVEALL-KKYVDVDIPGKVRKLSD---ALNVTDAND 60
           D + + D  G + L  AV    +G+ + L+  +  D+D      ++ D    L +     
Sbjct: 50  DANIQ-DNMGRTPLHAAVSADAQGVFQILIRNRATDLDA-----RMHDGTTPLILAARLA 103

Query: 61  QRSTTRNLLDK--NKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDS 118
                 +L++   + +      K+A++ A    NV    +LL    + ++          
Sbjct: 104 VEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN-----RE 158

Query: 119 MVSLCYRTLQSYIA--EDNLDSLQTFLENKRTVAD--DRDDNGGTALMFAAQKGKLSFVR 174
              L       ++A  E + ++ +  L++    A+    D         A ++     VR
Sbjct: 159 ETPL-------FLAAREGSYETAKVLLDHF---ANRDITDHMDRLPRDIAQERMHHDIVR 208

Query: 175 ELVTRGADVNAEDN 188
            L       + + +
Sbjct: 209 LLDEYNLVRSPQLH 222

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  177 bits (451), Expect = 4e-52
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 7/190 (3%)

Query: 125 RTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVN 184
             ++    E +++    FL N R      D    T LM A   G  + + +LV     + 
Sbjct: 9   EIVEKIKDEKSINQNLDFLRNYR------DSYNRTPLMVACMLGMENAIDKLVENFDKLE 62

Query: 185 AEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLD 244
            +D +  + L +A +     +  +LL  G+++  +D  G +PLMW+   G+++    LL+
Sbjct: 63  DKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLE 122

Query: 245 KNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVE 304
             A+VN       + LI A+  G +EIV  L++ GA ++  D   G T    A   G  E
Sbjct: 123 HGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDL-TGLTAEASARIFGRQE 181

Query: 305 IVDILLKAGA 314
           ++ I  +   
Sbjct: 182 VIKIFTEVRR 191

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  162 bits (413), Expect = 9e-47
 Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 11/168 (6%)

Query: 152 DRDDNGGTALMFAAQKGKLSFVRELVTRGADV--NAEDNDNWSPLTYAAREGYTDVCAEL 209
             D NG        +K         + +  D   N  D+ N +PL  A   G  +   +L
Sbjct: 3   HMDKNGEIVEKIKDEKS--------INQNLDFLRNYRDSYNRTPLMVACMLGMENAIDKL 54

Query: 210 LDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYT 269
           +++   LE +D+ G + L+WA           LL K ++VN       + L+W+   GY+
Sbjct: 55  VENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYS 114

Query: 270 EIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
           E+   L++ GA VN  +   G TPL+ A + G  EIV  LL+ GA++ 
Sbjct: 115 EMSYFLLEHGANVNDRNL-EGETPLIVASKYGRSEIVKKLLELGADIS 161

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  144 bits (366), Expect = 4e-40
 Identities = 47/154 (30%), Positives = 71/154 (46%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           Y  TPL+ AC  G    +D L++    ++   +   T L+ A   N   + E LL    N
Sbjct: 34  YNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN 93

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           VN  D  G T L  +   GY E++  LL  GA +N ++  G++ LI A K G   IV+ L
Sbjct: 94  VNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKL 153

Query: 515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLL 548
           L+   D+        TA  +A   G   ++K+  
Sbjct: 154 LELGADISARDLTGLTAEASARIFGRQEVIKIFT 187

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  142 bits (362), Expect = 1e-39
 Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 9/196 (4%)

Query: 419 GANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIA 478
           G+++D  G        +    +  + ++ L  Y+      D    T L +AC  G     
Sbjct: 1   GSHMDKNG---EIVEKIKDEKSINQNLDFLRNYR------DSYNRTPLMVACMLGMENAI 51

Query: 479 VLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEK 538
             L+ +   +  +D  G + LI AVK    GI E LL K  +V+      KT +  ++  
Sbjct: 52  DKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIF 111

Query: 539 GNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVL 598
           G   +   LL    ++     +G+TPL+ A K    E ++ L++  A I+A D  G T  
Sbjct: 112 GYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAE 171

Query: 599 HIAMRARSKTIVEVFI 614
             A     + ++++F 
Sbjct: 172 ASARIFGRQEVIKIFT 187

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  142 bits (360), Expect = 2e-39
 Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 6/191 (3%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            G         K   + +D L     +      Y  TPL+VA +      ++ L+E    
Sbjct: 7   NGEIVEKIKDEKSINQNLDFLRNYRDS------YNRTPLMVACMLGMENAIDKLVENFDK 60

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           +   D +G TAL  A K+    IA  LL+ G+ +N +D SG + L+ ++  G+  +   L
Sbjct: 61  LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFL 120

Query: 515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
           L+   +V+    E +T +  A + G   I+K LL    D+      G T    A      
Sbjct: 121 LEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQ 180

Query: 575 EAIQMLIDKKA 585
           E I++  + + 
Sbjct: 181 EVIKIFTEVRR 191

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  122 bits (308), Expect = 3e-32
 Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 14/140 (10%)

Query: 180 GADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADL--EHRDMGGWSPLMWASYKGHTD 237
           G+ +   D +          +              D    +RD    +PLM A   G  +
Sbjct: 1   GSHM---DKNGEIVEKIKDEKSIN--------QNLDFLRNYRDSYNRTPLMVACMLGMEN 49

Query: 238 TVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWA 297
            +  L++    +        ++LIWA       I   L+ KG+ VN  D   G TPL+W+
Sbjct: 50  AIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDF-SGKTPLMWS 108

Query: 298 CRKGHVEIVDILLKAGANVD 317
              G+ E+   LL+ GANV+
Sbjct: 109 IIFGYSEMSYFLLEHGANVN 128

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  105 bits (265), Expect = 2e-26
 Identities = 39/238 (16%), Positives = 79/238 (33%), Gaps = 77/238 (32%)

Query: 10  RDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLL 69
           RD    + L+ A   G    ++ L++ +  ++                            
Sbjct: 31  RDSYNRTPLMVACMLGMENAIDKLVENFDKLED--------------------------- 63

Query: 70  DKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQS 129
            K+         TA+  AV+   + I + LL+   ++                       
Sbjct: 64  -KDIE-----GSTALIWAVKNNRLGIAEKLLSKGSNVNT--------------------- 96

Query: 130 YIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDND 189
                                  +D +G T LM++   G       L+  GA+VN  + +
Sbjct: 97  -----------------------KDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLE 133

Query: 190 NWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNA 247
             +PL  A++ G +++  +LL+ GAD+  RD+ G +    A   G  + + +  +   
Sbjct: 134 GETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVRR 191

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 70.5 bits (174), Expect = 4e-14
 Identities = 36/206 (17%), Positives = 60/206 (29%), Gaps = 77/206 (37%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
            +D  G + LI AVK    GI E LL K  +V+                           
Sbjct: 63  DKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT-------------------------- 96

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQ 128
             K+        KT +  ++  G   +   LL    ++                      
Sbjct: 97  --KDFSG-----KTPLMWSIIFGYSEMSYFLLEHGANVND-------------------- 129

Query: 129 SYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDN 188
                                   R+  G T L+ A++ G+   V++L+  GAD++A D 
Sbjct: 130 ------------------------RNLEGETPLIVASKYGRSEIVKKLLELGADISARDL 165

Query: 189 DNWSPLTYAAREGYTDVCAELLDHGA 214
              +    A   G  +V     +   
Sbjct: 166 TGLTAEASARIFGRQEVIKIFTEVRR 191

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  176 bits (450), Expect = 7e-52
 Identities = 57/194 (29%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 125 RTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVN 184
             L     + +   ++  L++     D+ D  G T L  A     +   + L+ RGAD+N
Sbjct: 7   GALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADIN 66

Query: 185 AEDNDNWSPLTYAAREGYTDVCAELLDHGA-DLEHRDMGGWSPLMWASYKGHTDTVALLL 243
            +++ + SP  YA  +G T++ A +L H   DL   +  G + L+ A+ KGH D V LLL
Sbjct: 67  LQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLL 126

Query: 244 DK-NADVNAHGNYHISSLIWAA-----GRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWA 297
           +    D++   ++  ++LI A       + Y +IV LL++ GA  ++ D   G T + +A
Sbjct: 127 EDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDN-SGRTAMDYA 185

Query: 298 CRKGHVEIVDILLK 311
            +KG+ EI  IL +
Sbjct: 186 NQKGYTEISKILAQ 199

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  174 bits (445), Expect = 3e-51
 Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 8/174 (4%)

Query: 153 RDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDH 212
           +    G  L  A Q+        L      V+  D +  +PL  A      ++   L+D 
Sbjct: 2   KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDR 61

Query: 213 GADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNA-DVNAHGNYHISSLIWAAGRGYTEI 271
           GAD+  ++    SP ++A  +G T+ +A +L     D+N H  Y  ++LI AA +G+ + 
Sbjct: 62  GADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDN 121

Query: 272 VALLVKKG-AKVNVGDKVYGTTPLVWAC-----RKGHVEIVDILLKAGANVDVA 319
           V LL++ G   ++  +  +G T L+ A       + + +IV +L++ GA+  + 
Sbjct: 122 VKLLLEDGREDIDFQND-FGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIK 174

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  162 bits (413), Expect = 1e-46
 Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 7/194 (3%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
                L  A ++   ++ +IL      VD       TPL +A   N  E+ + L++   +
Sbjct: 5   EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD 64

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAY-INIQDRSGDSNLIHAVKGGHRGIVEA 513
           +N  +    +    A   G  EI   +L      +N  +R G + LI A + GH   V+ 
Sbjct: 65  INLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKL 124

Query: 514 LLKK-YVDVDIPGKERKTAVYTAV-----EKGNVPILKLLLTANPDLEIATKDGDTPLLK 567
           LL+    D+D       TA+  AV      +    I+KLL+    D  I    G T +  
Sbjct: 125 LLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDY 184

Query: 568 AVKTRNLEAIQMLI 581
           A +    E  ++L 
Sbjct: 185 ANQKGYTEISKILA 198

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  133 bits (338), Expect = 3e-36
 Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 84/275 (30%)

Query: 10  RDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLL 69
           +     + L  A +   + + E L      V             +  D            
Sbjct: 2   KTYEVGALLEAANQRDTKKVKEILQDTTYQV-------------DEVD------------ 36

Query: 70  DKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQS 129
                    E  T +  AV   ++ I K L+    D+ +                     
Sbjct: 37  --------TEGNTPLNIAVHNNDIEIAKALIDRGADINL--------------------- 67

Query: 130 YIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGA-DVNAEDN 188
                                  ++    +  ++A  +G+   +  ++     D+N  + 
Sbjct: 68  -----------------------QNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNR 104

Query: 189 DNWSPLTYAAREGYTDVCAELLDHG-ADLEHRDMGGWSPLMWA-----SYKGHTDTVALL 242
              + L  AA +G+ D    LL+ G  D++ ++  G++ L+ A       + + D V LL
Sbjct: 105 YGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLL 164

Query: 243 LDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
           ++  AD +   N   +++ +A  +GYTEI  +L +
Sbjct: 165 MENGADQSIKDNSGRTAMDYANQKGYTEISKILAQ 199

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  117 bits (297), Expect = 2e-30
 Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 7/129 (5%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGA-NVDVAGLYCWTPLLVATLGNFTEVVELLLEY-K 452
              +P ++A  +G  EI+  +LK    +++    Y    L+ A      + V+LLLE  +
Sbjct: 71  ISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGR 130

Query: 453 PNVNALDKDGCTALTIAC-----KDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGH 507
            +++  +  G TAL  A         Y +I  LL+ +GA  +I+D SG + + +A + G+
Sbjct: 131 EDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGY 190

Query: 508 RGIVEALLK 516
             I + L +
Sbjct: 191 TEISKILAQ 199

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  117 bits (295), Expect = 3e-30
 Identities = 33/163 (20%), Positives = 71/163 (43%), Gaps = 7/163 (4%)

Query: 459 DKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKY 518
             +    L  A +    ++  +L ++   ++  D  G++ L  AV      I +AL+ + 
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG 62

Query: 519 VDVDIPGKERKTAVYTAVEKGNVPILKLLL-TANPDLEIATKDGDTPLLKAVKTRNLEAI 577
            D+++      +    A  +G   IL  +L  A PDL    + G   L+ A +  +++ +
Sbjct: 63  ADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNV 122

Query: 578 QMLIDK-KAKITAVDKRGDTVLHIAMRARS-----KTIVEVFI 614
           ++L++  +  I   +  G T L  A+  R      + IV++ +
Sbjct: 123 KLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLM 165

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  109 bits (275), Expect = 1e-27
 Identities = 44/244 (18%), Positives = 85/244 (34%), Gaps = 82/244 (33%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
           + D  G++ L  AV      I +AL+ +  D+++                          
Sbjct: 34  EVDTEGNTPLNIAVHNNDIEIAKALIDRGADINL-------------------------- 67

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQ 128
             +N         +    A  +G   IL  +L                            
Sbjct: 68  --QNSI-----SDSPYLYAGAQGRTEILAYML---------------------------- 92

Query: 129 SYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRG-ADVNAED 187
            +   D                +  +  GG AL+ AA+KG +  V+ L+  G  D++ ++
Sbjct: 93  KHATPD---------------LNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQN 137

Query: 188 NDNWSPLTYAA-----REGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALL 242
           +  ++ L  A       + Y D+   L+++GAD   +D  G + + +A+ KG+T+   +L
Sbjct: 138 DFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKIL 197

Query: 243 LDKN 246
              N
Sbjct: 198 AQYN 201

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 64.0 bits (157), Expect = 6e-12
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 5/62 (8%)

Query: 395 YGTTPLVWAC-----RKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLL 449
           +G T L+ A       + + +IV +L++ GA+  +      T +  A    +TE+ ++L 
Sbjct: 139 FGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILA 198

Query: 450 EY 451
           +Y
Sbjct: 199 QY 200

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 42.8 bits (102), Expect = 1e-04
 Identities = 8/43 (18%), Positives = 14/43 (32%)

Query: 289 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSA 331
                L  A ++   ++ +IL      VD        PL  + 
Sbjct: 5   EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAV 47

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  176 bits (448), Expect = 2e-51
 Identities = 41/182 (22%), Positives = 68/182 (37%), Gaps = 7/182 (3%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
               D   T       KG+       +     V  +     +PL  AA+ G      E L
Sbjct: 39  IYITDMSDTNWWKGTSKGRT-----GLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECL 93

Query: 211 DHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDK-NADVNAHGNYHISSLIWAAGRGYT 269
           D+   +   D  G + L WA + GH D V +L  + N ++N       ++L  AA +GY 
Sbjct: 94  DNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYA 153

Query: 270 EIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYS 329
           +IV LL+ KGA+ ++ +          A       ++       A   ++    Y+    
Sbjct: 154 DIVQLLLAKGARTDLRNI-EKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDED 212

Query: 330 SA 331
           S 
Sbjct: 213 SD 214

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  162 bits (411), Expect = 4e-46
 Identities = 38/208 (18%), Positives = 67/208 (32%), Gaps = 6/208 (2%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            G   +  A         D L     ++        T     T    T ++         
Sbjct: 11  PGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSN-----Y 65

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           V    +     L  A K G        L++   +N  D++G + L  A  GGH+ IVE L
Sbjct: 66  VAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEML 125

Query: 515 LKKY-VDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRN 573
             +  ++++   K   TA++ A  KG   I++LLL      ++   +       A     
Sbjct: 126 FTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAAC 185

Query: 574 LEAIQMLIDKKAKITAVDKRGDTVLHIA 601
              ++      A  T  +         +
Sbjct: 186 ASLLKKKQGTDAVRTLSNAEDYLDDEDS 213

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  162 bits (411), Expect = 4e-46
 Identities = 37/167 (22%), Positives = 65/167 (38%), Gaps = 7/167 (4%)

Query: 153 RDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDH 212
               G   +  A    +     EL     D+    + + +       +G T +       
Sbjct: 8   PVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLI-----P 62

Query: 213 GADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIV 272
              +  +     +PL  A+ +G+   +   LD    VN       ++L WA   G+ +IV
Sbjct: 63  SNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIV 122

Query: 273 ALLV-KKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDV 318
            +L  +   ++N  +K  G T L  A  KG+ +IV +LL  GA  D+
Sbjct: 123 EMLFTQPNIELNQQNK-LGDTALHAAAWKGYADIVQLLLAKGARTDL 168

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  147 bits (372), Expect = 1e-40
 Identities = 37/252 (14%), Positives = 69/252 (27%), Gaps = 46/252 (18%)

Query: 289 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVG 348
            G   +  A         D L     ++      +    +                    
Sbjct: 11  PGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTS---------------- 54

Query: 349 LYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGH 408
                  G++ L+P      +                             PL  A ++G+
Sbjct: 55  ------KGRTGLIPSNYVAEQA-----------------------ESIDNPLHEAAKRGN 85

Query: 409 VEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLL-EYKPNVNALDKDGCTALT 467
           +  +   L     V+       T L  A  G   ++VE+L  +    +N  +K G TAL 
Sbjct: 86  LSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALH 145

Query: 468 IACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKE 527
            A   GY +I  LLL  GA  ++++         A       +++          +   E
Sbjct: 146 AAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAE 205

Query: 528 RKTAVYTAVEKG 539
                  +  + 
Sbjct: 206 DYLDDEDSDLEH 217

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  138 bits (349), Expect = 2e-37
 Identities = 38/286 (13%), Positives = 70/286 (24%), Gaps = 80/286 (27%)

Query: 223 GWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKV 282
           G   +  A Y     T   L  +  D+    +                            
Sbjct: 12  GQVKVFRALYTFEPRTPDELYIEEGDIIYITDM--------------------------- 44

Query: 283 NVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLA 342
                    T       KG   ++         V         PL+ +A           
Sbjct: 45  -------SDTNWWKGTSKGRTGLI-----PSNYVAEQAESIDNPLHEAA----------- 81

Query: 343 TPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVW 402
                    K G+            ++      V                   G+T L W
Sbjct: 82  ---------KRGN---------LSWLRECLDNRVGVNGLDK-----------AGSTALYW 112

Query: 403 ACRKGHVEIVDILL-KAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKD 461
           AC  GH +IV++L  +    ++       T L  A    + ++V+LLL      +  + +
Sbjct: 113 ACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIE 172

Query: 462 GCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGH 507
              A  +A       +      + A   + +     +   +    H
Sbjct: 173 KKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLEHH 218

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  129 bits (327), Expect = 2e-34
 Identities = 38/262 (14%), Positives = 71/262 (27%), Gaps = 54/262 (20%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
           K  + G   +  A+        + L  +  D+            ++ T+     S  R  
Sbjct: 7   KPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYI-------TDMSDTNWWKGTSKGRTG 59

Query: 69  LDK--NKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRT 126
           L       +  +     ++ A ++GN+  L+  L     +                    
Sbjct: 60  LIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNG------------------ 101

Query: 127 LQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVT-RGADVNA 185
                                      D  G TAL +A   G    V  L T    ++N 
Sbjct: 102 --------------------------LDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ 135

Query: 186 EDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDK 245
           ++    + L  AA +GY D+   LL  GA  + R++        A+       +      
Sbjct: 136 QNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGT 195

Query: 246 NADVNAHGNYHISSLIWAAGRG 267
           +A               +    
Sbjct: 196 DAVRTLSNAEDYLDDEDSDLEH 217

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  125 bits (316), Expect = 5e-33
 Identities = 30/149 (20%), Positives = 50/149 (33%), Gaps = 7/149 (4%)

Query: 184 NAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLL 243
                     +  A          EL     D+ +      +     + KG T  +    
Sbjct: 6   PKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLI---- 61

Query: 244 DKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHV 303
             +  V        + L  AA RG    +   +     VN  DK  G+T L WAC  GH 
Sbjct: 62  -PSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDK-AGSTALYWACHGGHK 119

Query: 304 EIVDILL-KAGANVDVAGLWAYMPLYSSA 331
           +IV++L  +    ++         L+++A
Sbjct: 120 DIVEMLFTQPNIELNQQNKLGDTALHAAA 148

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  114 bits (288), Expect = 3e-29
 Identities = 32/171 (18%), Positives = 58/171 (33%), Gaps = 11/171 (6%)

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
               K G   +  A           L      I       D+N       G  G++ +  
Sbjct: 6   PKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSN- 64

Query: 516 KKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLE 575
                V    +     ++ A ++GN+  L+  L     +    K G T L  A    + +
Sbjct: 65  ----YVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKD 120

Query: 576 AIQMLIDKK-AKITAVDKRGDTVLHIAMRARSKTIVEVFIR-----NPKNN 620
            ++ML  +   ++   +K GDT LH A       IV++ +      + +N 
Sbjct: 121 IVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNI 171

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 98.1 bits (245), Expect = 2e-23
 Identities = 37/228 (16%), Positives = 62/228 (27%), Gaps = 78/228 (34%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
           ++  S D+ L  A K G+   +   L   V V             N  D           
Sbjct: 68  EQAESIDNPLHEAAKRGNLSWLRECLDNRVGV-------------NGLD----------- 103

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLT-ANPDLEIATKTLPRSDSMVSLCYRTL 127
                    K   TA+Y A   G+  I+++L T  N +L                     
Sbjct: 104 ---------KAGSTALYWACHGGHKDIVEMLFTQPNIELNQ------------------- 135

Query: 128 QSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAED 187
                                    ++  G TAL  AA KG    V+ L+ +GA  +  +
Sbjct: 136 -------------------------QNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRN 170

Query: 188 NDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGH 235
            +       A       +  +     A     +   +     +  + H
Sbjct: 171 IEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLEHH 218

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 52.2 bits (126), Expect = 9e-08
 Identities = 8/67 (11%), Positives = 17/67 (25%)

Query: 554 LEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVF 613
                K G   + +A+ T        L  ++  I  +    DT            ++   
Sbjct: 5   PPKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSN 64

Query: 614 IRNPKNN 620
               +  
Sbjct: 65  YVAEQAE 71

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  172 bits (439), Expect = 6e-51
 Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 3/162 (1%)

Query: 154 DDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHG 213
            +  G  L  AA +G L  +  L+    +VNA++    + L    + G  ++   LL  G
Sbjct: 2   AEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTAL-QVMKLGNPEIARRLLLRG 60

Query: 214 ADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVA 273
           A+ + +D  G++ +  A+  G  DT+  LL+  ADVN   N     L  AA  G+  +V 
Sbjct: 61  ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVE 120

Query: 274 LLVKKGAK-VNVGDKVYGTTPLVWACRKGHVEIVDILLKAGA 314
            LVK  A  V   +   G T    A   G  E+V ++   GA
Sbjct: 121 FLVKHTASNVGHRNH-KGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  139 bits (353), Expect = 9e-39
 Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 2/154 (1%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
               L  A  +G +E +  LL+   NV+    +  T L V  LGN  E+   LL    N 
Sbjct: 5   WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGN-PEIARRLLLRGANP 63

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           +  D+ G   +  A + G+ +    LL   A +NI+D  G+  L  A K GH  +VE L+
Sbjct: 64  DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLV 123

Query: 516 KK-YVDVDIPGKERKTAVYTAVEKGNVPILKLLL 548
           K    +V     +  TA   A   G   ++ L+ 
Sbjct: 124 KHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 157

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  130 bits (329), Expect = 2e-35
 Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 2/131 (1%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
           + ++  G TAL      G     R L+ RGA+ + +D   ++ +  AAR G+ D    LL
Sbjct: 32  NAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLL 90

Query: 211 DHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNA-DVNAHGNYHISSLIWAAGRGYT 269
           +  AD+   D  G  PL  A+ +GH   V  L+   A +V    +   ++   A   G  
Sbjct: 91  EFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRN 150

Query: 270 EIVALLVKKGA 280
           E+V+L+   GA
Sbjct: 151 EVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  125 bits (317), Expect = 8e-34
 Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 2/157 (1%)

Query: 430 WTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYIN 489
              L  A      E +  LL+   NVNA +  G TAL +    G  EIA  LL  GA  +
Sbjct: 6   GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPD 64

Query: 490 IQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLT 549
           ++DR+G + +  A + G    ++ LL+   DV+I   E    ++ A ++G++ +++ L+ 
Sbjct: 65  LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVK 124

Query: 550 AN-PDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKA 585
               ++      GDT    A      E + ++    A
Sbjct: 125 HTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  118 bits (299), Expect = 3e-31
 Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 2/124 (1%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           +G T L    + G+ EI   LL  GAN D+     +  +  A    F + ++ LLE++ +
Sbjct: 37  FGRTALQVM-KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQAD 95

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAY-INIQDRSGDSNLIHAVKGGHRGIVEA 513
           VN  D +G   L +A K+G+  +   L+   A  +  ++  GD+    A   G   +V  
Sbjct: 96  VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSL 155

Query: 514 LLKK 517
           +   
Sbjct: 156 MQAN 159

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  114 bits (288), Expect = 8e-30
 Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 2/158 (1%)

Query: 458 LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKK 517
           + +     L  A   G  E    LL +   +N Q+  G + L   +K G+  I   LL +
Sbjct: 1   MAEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTAL-QVMKLGNPEIARRLLLR 59

Query: 518 YVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAI 577
             + D+  +     ++ A   G +  L+ LL    D+ I   +G+ PL  A K  +L  +
Sbjct: 60  GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVV 119

Query: 578 QMLIDKKAK-ITAVDKRGDTVLHIAMRARSKTIVEVFI 614
           + L+   A  +   + +GDT   +A       +V +  
Sbjct: 120 EFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 157

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  108 bits (273), Expect = 8e-28
 Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 17/170 (10%)

Query: 81  KTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQ 140
              + +A  +G++  L  LL  N ++                  RT    +   N +  +
Sbjct: 6   GNELASAAARGDLEQLTSLLQNNVNVNAQNGF-----------GRTALQVMKLGNPEIAR 54

Query: 141 TFLENKRTVAD--DRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAA 198
             L      A+   +D  G   +  AA+ G L  ++ L+   ADVN EDN+   PL  AA
Sbjct: 55  RLLLRG---ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAA 111

Query: 199 REGYTDVCAELLDHGA-DLEHRDMGGWSPLMWASYKGHTDTVALLLDKNA 247
           +EG+  V   L+ H A ++ HR+  G +    A   G  + V+L+    A
Sbjct: 112 KEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  104 bits (261), Expect = 4e-26
 Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 2/110 (1%)

Query: 222 GGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAK 281
              + L  A+ +G  + +  LL  N +VNA   +  ++L      G  EI   L+ +GA 
Sbjct: 4   PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGAN 62

Query: 282 VNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSA 331
            ++ D+  G   +  A R G ++ +  LL+  A+V++      +PL+ +A
Sbjct: 63  PDLKDR-TGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAA 111

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  171 bits (436), Expect = 8e-51
 Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 3/137 (2%)

Query: 180 GADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTV 239
              ++     + + L  AA  G  +   +LL+ GAD    +  G  P+      G     
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVA 60

Query: 240 ALLLDKNADVNAHGNYHISS-LIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWAC 298
            LLL   A+ N      ++  +  AA  G+ + + +L + GA+++V D  +G  P+  A 
Sbjct: 61  ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDA-WGRLPVDLAE 119

Query: 299 RKGHVEIVDILLKAGAN 315
            +GH +I   L  A  +
Sbjct: 120 EQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  136 bits (344), Expect = 7e-38
 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 1/119 (0%)

Query: 213 GADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIV 272
              +        + L  A+ +G  +TV  LL+  AD NA   +    +      G  ++ 
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMM-MGSAQVA 60

Query: 273 ALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSA 331
            LL+  GA+ N  D    T P+  A R+G ++ + +L +AGA +DV   W  +P+  + 
Sbjct: 61  ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAE 119

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  129 bits (327), Expect = 1e-35
 Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 2/125 (1%)

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKP 453
                 L  A  +G VE V  LL+AGA+ +    +   P+ V  +G+  +V ELLL +  
Sbjct: 10  GSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGS-AQVAELLLLHGA 68

Query: 454 NVNALDKDGCT-ALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVE 512
             N  D    T  +  A ++G+ +  V+L  +GA +++ D  G   +  A + GHR I  
Sbjct: 69  EPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIAR 128

Query: 513 ALLKK 517
            L   
Sbjct: 129 YLHAA 133

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  119 bits (301), Expect = 6e-32
 Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 2/137 (1%)

Query: 418 AGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEI 477
               + + G      L  A      E V  LLE   + NAL++ G   + +    G  ++
Sbjct: 1   GSPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQV 59

Query: 478 AVLLLNSGAYINIQDRSGDSN-LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAV 536
           A LLL  GA  N  D +  +  +  A + G    +  L +    +D+     +  V  A 
Sbjct: 60  AELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAE 119

Query: 537 EKGNVPILKLLLTANPD 553
           E+G+  I + L  A  D
Sbjct: 120 EQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  113 bits (285), Expect = 1e-29
 Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 2/99 (2%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNW-SPLTYAAREGYTDVCAEL 209
           +  +  G   +      G       L+  GA+ N  D      P+  AAREG+ D    L
Sbjct: 39  NALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVL 97

Query: 210 LDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNAD 248
              GA L+  D  G  P+  A  +GH D    L     D
Sbjct: 98  HRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  102 bits (258), Expect = 5e-26
 Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 2/93 (2%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWT-PLLVATLGNFTEVVELLLEYKP 453
           +G  P+      G  ++ ++LL  GA  + A     T P+  A    F + + +L     
Sbjct: 44  FGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGA 102

Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGA 486
            ++  D  G   + +A + G+ +IA  L  +  
Sbjct: 103 RLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 99.1 bits (248), Expect = 8e-25
 Identities = 30/173 (17%), Positives = 56/173 (32%), Gaps = 41/173 (23%)

Query: 279 GAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSE 338
              +++         L  A  +G VE V  LL+AGA+ +    +   P+           
Sbjct: 2   SPGIHMLGG-SSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQ---------- 50

Query: 339 PGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTT 398
                          GS          +  +     G +P               +  T 
Sbjct: 51  -----------VMMMGS---------AQVAELLLLHGAEPN----------CADPATLTR 80

Query: 399 PLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEY 451
           P+  A R+G ++ + +L +AGA +DV   +   P+ +A      ++   L   
Sbjct: 81  PVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAA 133

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 91.7 bits (229), Expect = 3e-22
 Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 2/133 (1%)

Query: 485 GAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPIL 544
              I++   S D+ L  A   G    V  LL+   D +   +  +  +   +  G+  + 
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMM-MGSAQVA 60

Query: 545 KLLLTANPDLEIATKDGDT-PLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMR 603
           +LLL    +   A     T P+  A +   L+ + +L    A++   D  G   + +A  
Sbjct: 61  ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEE 120

Query: 604 ARSKTIVEVFIRN 616
              + I       
Sbjct: 121 QGHRDIARYLHAA 133

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 79.8 bits (198), Expect = 5e-18
 Identities = 31/208 (14%), Positives = 51/208 (24%), Gaps = 79/208 (37%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
               S D+ L  A   G    V  LL+   D              N  +   +       
Sbjct: 7   MLGGSSDAGLATAAARGQVETVRQLLEAGADP-------------NALNRFGR------- 46

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQ 128
                          +   +  G+  + +LLL    +   A                   
Sbjct: 47  -------------RPIQVMM-MGSAQVAELLLLHGAEPNCA------------------- 73

Query: 129 SYIAEDNLDSLQTFLENKRTVADDRDDNGGT-ALMFAAQKGKLSFVRELVTRGADVNAED 187
                                    D    T  +  AA++G L  +  L   GA ++  D
Sbjct: 74  -------------------------DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCD 108

Query: 188 NDNWSPLTYAAREGYTDVCAELLDHGAD 215
                P+  A  +G+ D+   L     D
Sbjct: 109 AWGRLPVDLAEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 54.8 bits (133), Expect = 3e-09
 Identities = 11/67 (16%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 550 ANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTI 609
            +P + +     D  L  A     +E ++ L++  A   A+++ G   + + M   ++ +
Sbjct: 1   GSPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGSAQ-V 59

Query: 610 VEVFIRN 616
            E+ + +
Sbjct: 60  AELLLLH 66

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 46.3 bits (111), Expect = 2e-06
 Identities = 8/27 (29%), Positives = 13/27 (48%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGAN 421
           +G  P+  A  +GH +I   L  A  +
Sbjct: 110 WGRLPVDLAEEQGHRDIARYLHAATGD 136

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  170 bits (434), Expect = 6e-50
 Identities = 39/175 (22%), Positives = 65/175 (37%), Gaps = 6/175 (3%)

Query: 144 ENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYT 203
           E  + +       G    +   + G            ADV +E     +P   AAR+   
Sbjct: 1   EVNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEY---ETPWWTAARKADE 57

Query: 204 DVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNA-HGNYHISSLIW 262
                 L    D++  D  G + L++ +  G    V LL +  AD++       +++L  
Sbjct: 58  QA-LSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHM 116

Query: 263 AAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
           AAG    E+V  LV+ GA + V D+  G T L  A            ++ G  + 
Sbjct: 117 AAGYVRPEVVEALVELGADIEVEDE-RGLTALELAREILKTTPKGNPMQFGRRIG 170

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  145 bits (368), Expect = 1e-40
 Identities = 35/162 (21%), Positives = 63/162 (38%), Gaps = 20/162 (12%)

Query: 152 DRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLD 211
           D      T    AA+K     + +L+    DV+A D +  + L + A  G       L +
Sbjct: 39  DVVSEYETPWWTAARKADEQALSQLL-EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAE 97

Query: 212 HGADLEHRDM-GGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTE 270
            GADL+HRDM GG + L  A+     + V  L++  AD+       +++L  A     T 
Sbjct: 98  AGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTT 157

Query: 271 IVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKA 312
                ++ G ++                     +++++L   
Sbjct: 158 PKGNPMQFGRRIG------------------LEKVINVLEGQ 181

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  141 bits (358), Expect = 3e-39
 Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 4/140 (2%)

Query: 180 GADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTV 239
               +    +         ++G++          AD+        +P   A+ K     +
Sbjct: 4   KIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSE---YETPWWTAARKADEQAL 60

Query: 240 ALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACR 299
           + LL ++ DV+A      ++L++ AG G  + V LL + GA ++  D   G T L  A  
Sbjct: 61  SQLL-EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119

Query: 300 KGHVEIVDILLKAGANVDVA 319
               E+V+ L++ GA+++V 
Sbjct: 120 YVRPEVVEALVELGADIEVE 139

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  134 bits (341), Expect = 8e-37
 Identities = 39/163 (23%), Positives = 64/163 (39%), Gaps = 7/163 (4%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G    +   + GH           A+V        TP   A      + +  LLE   +V
Sbjct: 14  GAMEYLIEWKDGHSPSWVPSSYIAADVVSEY---ETPWWTAARKADEQALSQLLE-DRDV 69

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD-RSGDSNLIHAVKGGHRGIVEAL 514
           +A+D++G TAL      G  +   LL  +GA ++ +D R G + L  A       +VEAL
Sbjct: 70  DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEAL 129

Query: 515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLT--ANPDLE 555
           ++   D+++  +   TA+  A E          +       LE
Sbjct: 130 VELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLE 172

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  119 bits (301), Expect = 2e-31
 Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 2/125 (1%)

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKP 453
           S   TP   A RK   + +  LL+   +VD       T LL        + V LL E   
Sbjct: 42  SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGA 100

Query: 454 NVNALD-KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVE 512
           +++  D + G TAL +A      E+   L+  GA I ++D  G + L  A +        
Sbjct: 101 DLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKG 160

Query: 513 ALLKK 517
             ++ 
Sbjct: 161 NPMQF 165

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  116 bits (294), Expect = 2e-30
 Identities = 39/176 (22%), Positives = 60/176 (34%), Gaps = 24/176 (13%)

Query: 82  TAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIA--EDNLDSL 139
                  + G+ P          D+    +T                 + A  + +  +L
Sbjct: 16  MEYLIEWKDGHSPSWVPSSYIAADVVSEYET--------PW-------WTAARKADEQAL 60

Query: 140 QTFLENKRTVAD--DRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAED-NDNWSPLTY 196
              LE+     D    D+NG TAL+F A  G    VR L   GAD++  D     + L  
Sbjct: 61  SQLLED----RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHM 116

Query: 197 AAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAH 252
           AA     +V   L++ GAD+E  D  G + L  A     T      +     +   
Sbjct: 117 AAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLE 172

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  112 bits (283), Expect = 6e-29
 Identities = 37/164 (22%), Positives = 61/164 (37%), Gaps = 5/164 (3%)

Query: 452 KPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIV 511
           K   +    +G     I  KDG+    V      A +  +  +       A +      +
Sbjct: 4   KIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETP---WWTAARKADEQAL 60

Query: 512 EALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIA-TKDGDTPLLKAVK 570
             LL+   DVD   +  +TA+      G+   ++LL  A  DL+    + G T L  A  
Sbjct: 61  SQLLED-RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119

Query: 571 TRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI 614
               E ++ L++  A I   D+RG T L +A      T     +
Sbjct: 120 YVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPM 163

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  109 bits (275), Expect = 8e-28
 Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 1/100 (1%)

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGL-YCWTPLLVATLGNFTEVVELLLEYK 452
             G T L++    G  + V +L +AGA++D   +    T L +A      EVVE L+E  
Sbjct: 74  ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELG 133

Query: 453 PNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
            ++   D+ G TAL +A +          +  G  I ++ 
Sbjct: 134 ADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEK 173

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 41.3 bits (98), Expect = 2e-04
 Identities = 5/31 (16%), Positives = 8/31 (25%)

Query: 290 GTTPLVWACRKGHVEIVDILLKAGANVDVAG 320
           G    +   + GH           A+V    
Sbjct: 14  GAMEYLIEWKDGHSPSWVPSSYIAADVVSEY 44

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  171 bits (435), Expect = 2e-49
 Identities = 51/229 (22%), Positives = 91/229 (39%), Gaps = 11/229 (4%)

Query: 396 GTTPLVWACRKGHV-EIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
              PL  AC +    ++ ++L    + +         PL  +      E+   LL    N
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN 61

Query: 455 VNA---LDKDGCTALTIACKDGYYEIAVLLLN--SGAYINIQDRSGDSNLIHAVKGGHRG 509
           VN     D  G T   IAC  G  E+   L +      +N     G + L  AV      
Sbjct: 62  VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE 121

Query: 510 IVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP-DLEIATKDGDTPLLKA 568
           + + L++    V I  K  +  ++ A   G++ +++LL       +    K G TPL  A
Sbjct: 122 VSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHA 181

Query: 569 VKTRNLEAIQMLIDKK-AKITAVDKRGDTVLHIAMRARSKTIVEVFIRN 616
           +   + +A  +L++K  A+   VD +G     +A+    + + + F+ N
Sbjct: 182 LAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNN 227

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  166 bits (422), Expect = 1e-47
 Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 7/165 (4%)

Query: 157 GGTALMFAAQKGKLSFVRE-LVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGAD 215
               L  A  + +   V+E L ++ + +  +D D   PL ++      ++ + LL    +
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN 61

Query: 216 LEHRDMG---GWSPLMWASYKGHTDTVALLLDK--NADVNAHGNYHISSLIWAAGRGYTE 270
           +   D     GW+P   A   G+ + V  L D+    D+N   N  ++ L  A G+ + E
Sbjct: 62  VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE 121

Query: 271 IVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGAN 315
           +   L++ GA V + DK +   PL  A   G ++++++L   G +
Sbjct: 122 VSQFLIENGASVRIKDK-FNQIPLHRAASVGSLKLIELLCGLGKS 165

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  164 bits (418), Expect = 5e-47
 Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 8/192 (4%)

Query: 133 EDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAE---DND 189
           E+    +Q  L +K ++   +D +G   L ++           L+++  +VN +   D+ 
Sbjct: 12  ENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDS 71

Query: 190 NWSPLTYAAREGYTDVCAELLDH--GADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNA 247
            W+P   A   G  +V   L D     DL      G + L  A  K   +    L++  A
Sbjct: 72  GWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGA 131

Query: 248 DVNAHGNYHISSLIWAAGRGYTEIVALLVKKG-AKVNVGDKVYGTTPLVWACRKGHVEIV 306
            V     ++   L  AA  G  +++ LL   G + VN  DK  G TPL  A  +GH +  
Sbjct: 132 SVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDK-QGWTPLFHALAEGHGDAA 190

Query: 307 DILL-KAGANVD 317
            +L+ K GA  D
Sbjct: 191 VLLVEKYGAEYD 202

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  149 bits (379), Expect = 1e-41
 Identities = 46/210 (21%), Positives = 81/210 (38%), Gaps = 9/210 (4%)

Query: 431 TPLLVATL-GNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYIN 489
            PL  A +   F +V ELL      +   D+DG   L  +     +EI   LL+    +N
Sbjct: 4   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 63

Query: 490 IQDRSGDSN---LIHAVKGGHRGIVEALLKKYVDVDI--PGKERKTAVYTAVEKGNVPIL 544
           + D   DS       A   G+  +V++L  + +  D+     +  T ++ AV K    + 
Sbjct: 64  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 123

Query: 545 KLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDK-KAKITAVDKRGDTVLHIAMR 603
           + L+     + I  K    PL +A    +L+ I++L    K+ +   DK+G T L  A+ 
Sbjct: 124 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 183

Query: 604 ARSKTIVEVFIRNPKNNILLYRPNKAGETP 633
                   + +            +  G   
Sbjct: 184 EGHGDAAVLLVEKYGAEY--DLVDNKGAKA 211

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  148 bits (377), Expect = 3e-41
 Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 5/159 (3%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTR--GADVNAEDNDNWSPLTYAAREGYTDVCAE 208
           D  DD+G T    A   G L  V+ L  R    D+N   N   + L  A  + + +V   
Sbjct: 66  DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQF 125

Query: 209 LLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDK-NADVNAHGNYHISSLIWAAGRG 267
           L+++GA +  +D     PL  A+  G    + LL     + VN       + L  A   G
Sbjct: 126 LIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG 185

Query: 268 YTEIVALLV-KKGAKVNVGDKVYGTTPLVWACRKGHVEI 305
           + +   LLV K GA+ ++ D   G      A  +   + 
Sbjct: 186 HGDAAVLLVEKYGAEYDLVDN-KGAKAEDVALNEQVKKF 223

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  131 bits (332), Expect = 5e-35
 Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 7/158 (4%)

Query: 395 YGTTPLVWACRKGHVEIVDILL--KAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYK 452
            G TP   AC  G++E+V  L       +++       T L +A    + EV + L+E  
Sbjct: 71  SGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG 130

Query: 453 PNVNALDKDGCTALTIACKDGYYEIAVLLLNSG-AYINIQDRSGDSNLIHAVKGGHRGIV 511
            +V   DK     L  A   G  ++  LL   G + +N QD+ G + L HA+  GH    
Sbjct: 131 ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAA 190

Query: 512 EALLKKY-VDVDIPGKERKTAVYTAVEKGNVPILKLLL 548
             L++KY  + D+   +   A   A+ +      K  L
Sbjct: 191 VLLVEKYGAEYDLVDNKGAKAEDVALNEQVK---KFFL 225

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  126 bits (320), Expect = 2e-33
 Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 5/144 (3%)

Query: 193 PLTYAAREGYTDVCAELL-DHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNA 251
           PL  A  E       ELL    + L  +D  G  PL W+      +  + LL K  +VN 
Sbjct: 5   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 64

Query: 252 ---HGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDK-VYGTTPLVWACRKGHVEIVD 307
                +   +    A   G  E+V  L  +  K ++      G T L  A  K   E+  
Sbjct: 65  DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124

Query: 308 ILLKAGANVDVAGLWAYMPLYSSA 331
            L++ GA+V +   +  +PL+ +A
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAA 148

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  124 bits (315), Expect = 1e-32
 Identities = 51/271 (18%), Positives = 82/271 (30%), Gaps = 77/271 (28%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
           ++D+ G   L  +V      I   LL K  +V             N+ D  D        
Sbjct: 31  QKDQDGRIPLHWSVSFQAHEITSFLLSKMENV-------------NLDDYPD-------- 69

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQ 128
                        T  + A   GN+ ++K L       ++                    
Sbjct: 70  ---------DSGWTPFHIACSVGNLEVVKSLYDRPLKPDL-------------------- 100

Query: 129 SYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDN 188
                                 +   + G T L  A  K      + L+  GA V  +D 
Sbjct: 101 ----------------------NKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDK 138

Query: 189 DNWSPLTYAAREGYTDVCAELLDHG-ADLEHRDMGGWSPLMWASYKGHTDTVALLLDKN- 246
            N  PL  AA  G   +   L   G + +  +D  GW+PL  A  +GH D   LL++K  
Sbjct: 139 FNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYG 198

Query: 247 ADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
           A+ +   N    +   A      ++    + 
Sbjct: 199 AEYDLVDNKGAKAEDVAL---NEQVKKFFLN 226

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  171 bits (435), Expect = 2e-49
 Identities = 49/228 (21%), Positives = 83/228 (36%), Gaps = 11/228 (4%)

Query: 395 YGTTPLVWACRKGH----VEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLE 450
            G + L  A         +E++  +    A ++       TPL +A + N  E+ E LL 
Sbjct: 7   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 66

Query: 451 YKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGA------YINIQDRSGDSNLIHAVK 504
              +    D  G T L +AC+ G      +L  S         +   + +G + L  A  
Sbjct: 67  AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 126

Query: 505 GGHRGIVEALLKKYVDVDIP-GKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDT 563
            G+ GIVE L+    DV+       +TA++ AV+  N  ++ LLL    D+   T  G +
Sbjct: 127 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS 186

Query: 564 PLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVE 611
           P        +    Q L     +   +    +        +      E
Sbjct: 187 PYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEFTEFTE 234

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  166 bits (423), Expect = 1e-47
 Identities = 40/174 (22%), Positives = 63/174 (36%), Gaps = 8/174 (4%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
           + +++   T L  A    +      L+  G D    D    +PL  A  +G       L 
Sbjct: 39  NFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLT 98

Query: 211 DHGAD------LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYH-ISSLIWA 263
                      L+  +  G + L  AS  G+   V LL+   ADVNA    +  ++L  A
Sbjct: 99  QSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLA 158

Query: 264 AGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
                 ++V+LL+K GA VN      G +P      +    I   L +      
Sbjct: 159 VDLQNPDLVSLLLKCGADVNRVTY-QGYSPYQLTWGRPSTRIQQQLGQLTLENL 211

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  163 bits (414), Expect = 2e-46
 Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 10/174 (5%)

Query: 154 DDNGGTALMFAAQKGKLSFVRELV----TRGADVNAEDNDNWSPLTYAAREGYTDVCAEL 209
            ++G + L  A    + +   E++       A +N ++N   +PL  A      ++   L
Sbjct: 5   TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64

Query: 210 LDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNAD------VNAHGNYHISSLIWA 263
           L  G D E RD  G +PL  A  +G   +V +L            + A      + L  A
Sbjct: 65  LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 124

Query: 264 AGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
           +  GY  IV LLV  GA VN  +   G T L  A    + ++V +LLK GA+V+
Sbjct: 125 SIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN 178

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  134 bits (340), Expect = 5e-36
 Identities = 38/162 (23%), Positives = 58/162 (35%), Gaps = 8/162 (4%)

Query: 153 RDDNGGTALMFAAQKGKLSFVRELVTRGAD------VNAEDNDNWSPLTYAAREGYTDVC 206
           RD  G T L  A ++G L+ V  L            + A + +  + L  A+  GY  + 
Sbjct: 74  RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIV 133

Query: 207 AELLDHGADLEHRD-MGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAG 265
             L+  GAD+  ++   G + L  A    + D V+LLL   ADVN       S      G
Sbjct: 134 ELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWG 193

Query: 266 RGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVD 307
           R  T I   L +   +              +       E  +
Sbjct: 194 RPSTRIQQQLGQLTLENLQMLP-ESEDEESYDTESEFTEFTE 234

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  126 bits (319), Expect = 4e-33
 Identities = 29/142 (20%), Positives = 49/142 (34%), Gaps = 9/142 (6%)

Query: 185 AEDNDNWSPLTYAAREGYTDVCAE----LLDHGADLEHRDMGGWSPLMWASYKGHTDTVA 240
               D  S L  A       +  E    +    A L  ++    +PL  A      +   
Sbjct: 3   QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAE 62

Query: 241 LLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKV-----YGTTPLV 295
            LL    D         + L  A  +G    V +L +     ++   +      G T L 
Sbjct: 63  ALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLH 122

Query: 296 WACRKGHVEIVDILLKAGANVD 317
            A   G++ IV++L+  GA+V+
Sbjct: 123 LASIHGYLGIVELLVSLGADVN 144

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  119 bits (302), Expect = 7e-31
 Identities = 44/200 (22%), Positives = 80/200 (40%), Gaps = 15/200 (7%)

Query: 457 ALDKDGCTALTIACKDGY----YEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVE 512
            L +DG + L +A          E+   +    A++N Q+    + L  AV      I E
Sbjct: 3   QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAE 62

Query: 513 ALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLL------TANPDLEIATKDGDTPLL 566
           ALL    D ++      T ++ A E+G +  + +L         +  L+    +G T L 
Sbjct: 63  ALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLH 122

Query: 567 KAVKTRNLEAIQMLIDKKAKITAVDKR-GDTVLHIAMRARSKTIVEVFIRNPKNNILLYR 625
            A     L  +++L+   A + A +   G T LH+A+  ++  +V + +   K    + R
Sbjct: 123 LASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLL---KCGADVNR 179

Query: 626 PNKAGETPYSI-DMNNQKSI 644
               G +PY +        I
Sbjct: 180 VTYQGYSPYQLTWGRPSTRI 199

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 94.5 bits (236), Expect = 5e-22
 Identities = 23/101 (22%), Positives = 35/101 (34%), Gaps = 5/101 (4%)

Query: 223 GWSPLMWASYKGHTDT----VALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKK 278
           G S L  A            +  +    A +N   N   + L  A      EI   L+  
Sbjct: 8   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 67

Query: 279 GAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVA 319
           G    + D   G TPL  AC +G +  V +L ++     + 
Sbjct: 68  GCDPELRDF-RGNTPLHLACEQGCLASVGVLTQSCTTPHLH 107

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 89.5 bits (223), Expect = 2e-20
 Identities = 34/231 (14%), Positives = 57/231 (24%), Gaps = 70/231 (30%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
            RD  G++ L  A + G    V  L +      +   +         T+           
Sbjct: 73  LRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSIL-------KATN----------- 114

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQ 128
                        T ++ A   G + I++LL++   D+                      
Sbjct: 115 ---------YNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPC---------------- 149

Query: 129 SYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDN 188
                                      NG TAL  A        V  L+  GADVN    
Sbjct: 150 ---------------------------NGRTALHLAVDLQNPDLVSLLLKCGADVNRVTY 182

Query: 189 DNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTV 239
             +SP         T +  +L     +             + +    T+  
Sbjct: 183 QGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEFTEFT 233

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  171 bits (435), Expect = 2e-49
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 3/167 (1%)

Query: 154 DDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHG 213
           +  G  +L    +        E +  G  V   +    + L  ++ EG  D+   ++   
Sbjct: 2   EITGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEV 60

Query: 214 ADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVA 273
            D    +  G + L  A   GHT+ V  L+    +VNA  +   + L  AA     ++  
Sbjct: 61  DDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCK 120

Query: 274 LLVKKGAKVNVGDK--VYGTTPLVWACRKGHVEIVDILLKAGANVDV 318
            LV+ GA V       +           +G+ +    L      + +
Sbjct: 121 FLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGI 167

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  161 bits (410), Expect = 9e-46
 Identities = 30/168 (17%), Positives = 65/168 (38%), Gaps = 7/168 (4%)

Query: 154 DDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHG 213
           +      L+ ++ +G+   V+ ++    D +  +++  + L  A   G+T++   L+  G
Sbjct: 34  NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFG 93

Query: 214 ADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNA---HGNYHISSLIWAAGRGYTE 270
            ++   D  GW+PL  A+   +      L++  A V A         +        GYT+
Sbjct: 94  VNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQ 153

Query: 271 IVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDV 318
               L     K+ + +K      L     +   E   + +K G  + +
Sbjct: 154 CSQFLYGVQEKMGIMNK-GVIYALWDYEPQNDDE---LPMKEGDCMTI 197

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  154 bits (392), Expect = 3e-43
 Identities = 36/211 (17%), Positives = 71/211 (33%), Gaps = 9/211 (4%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G   L    R    +     +  G  V    L     LL ++L    ++V+ ++    + 
Sbjct: 5   GQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLP-LALLLDSSLEGEFDLVQRIIYEVDDP 63

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           +  + +G TAL  A   G+ EI   L+  G  +N  D  G + L  A    +  + + L+
Sbjct: 64  SLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLV 123

Query: 516 KKYVDV---DIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTR 572
           +    V        +        +E+G     + L      + I  K     L       
Sbjct: 124 ESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQN 183

Query: 573 NLEAIQMLIDKKAKITAVDKRGD--TVLHIA 601
           + E   + + +   +T + +  +       A
Sbjct: 184 DDE---LPMKEGDCMTIIHREDEDEIEWWWA 211

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  134 bits (339), Expect = 7e-36
 Identities = 33/179 (18%), Positives = 66/179 (36%), Gaps = 8/179 (4%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
                L+ +  +G  ++V  ++    +  +      T L  A     TE+V+ L+++  N
Sbjct: 36  LPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVN 95

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSN---LIHAVKGGHRGIV 511
           VNA D DG T L  A      ++   L+ SGA +     S           ++ G+    
Sbjct: 96  VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCS 155

Query: 512 EALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGD--TPLLKA 568
           + L      + I  K    A++    + +    +L +     + I  ++ +       A
Sbjct: 156 QFLYGVQEKMGIMNKGVIYALWDYEPQND---DELPMKEGDCMTIIHREDEDEIEWWWA 211

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  133 bits (336), Expect = 2e-35
 Identities = 31/210 (14%), Positives = 75/210 (35%), Gaps = 8/210 (3%)

Query: 430 WTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYIN 489
              L      N  +     + +   V   +      L  +  +G +++   ++      +
Sbjct: 6   QVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPS 64

Query: 490 IQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLT 549
           + +  G + L +AV  GH  IV+ L++  V+V+    +  T ++ A    NV + K L+ 
Sbjct: 65  LPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVE 124

Query: 550 ANPDLEIATKDGD---TPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARS 606
           +   +   T           + ++    +  Q L   + K+  ++K     L        
Sbjct: 125 SGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQND 184

Query: 607 KTIVEVFIRNPKNNILLYRPNKAGETPYSI 636
               E+ ++      +++R +   E  +  
Sbjct: 185 D---ELPMKEGDCMTIIHRED-EDEIEWWW 210

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  131 bits (331), Expect = 7e-35
 Identities = 45/296 (15%), Positives = 80/296 (27%), Gaps = 85/296 (28%)

Query: 11  DRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLD 70
           + +G  +L    +   R      +   + V                              
Sbjct: 2   EITGQVSLPPGKRTNLRKTGSERIAHGMRV-------------KFNP------------- 35

Query: 71  KNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSY 130
                        +  +  +G   +++ ++    D  +                      
Sbjct: 36  --------LPLALLLDSSLEGEFDLVQRIIYEVDDPSLP--------------------- 66

Query: 131 IAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDN 190
                                  +D G TAL  A   G    V+ LV  G +VNA D+D 
Sbjct: 67  -----------------------NDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDG 103

Query: 191 WSPLTYAAREGYTDVCAELLDHGADLE---HRDMGGWSPLMWASYKGHTDTVALLLDKNA 247
           W+PL  AA      VC  L++ GA +    + DM   +       +G+T     L     
Sbjct: 104 WTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQE 163

Query: 248 DVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKV-YGTTPLVWACRKGH 302
            +       I +L     +   E   L +K+G  + +  +         WA     
Sbjct: 164 KMGIMNKGVIYALWDYEPQNDDE---LPMKEGDCMTIIHREDEDEIEWWWARLNDK 216

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  114 bits (288), Expect = 5e-29
 Identities = 34/194 (17%), Positives = 71/194 (36%), Gaps = 8/194 (4%)

Query: 459 DKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKY 518
           +  G  +L    +    +     +  G  +        + L+ +   G   +V+ ++ + 
Sbjct: 2   EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNP-LPLALLLDSSLEGEFDLVQRIIYEV 60

Query: 519 VDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQ 578
            D  +P  E  TA++ AV  G+  I+K L+    ++  A  DG TPL  A    N++  +
Sbjct: 61  DDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCK 120

Query: 579 MLIDKKAKITAV---DKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP-Y 634
            L++  A + A+   D +        M        +      +    +   NK      +
Sbjct: 121 FLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEK---MGIMNKGVIYALW 177

Query: 635 SIDMNNQKSILAQE 648
             +  N   +  +E
Sbjct: 178 DYEPQNDDELPMKE 191

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 94.6 bits (236), Expect = 4e-22
 Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 8/123 (6%)

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANV---DVAGLYCWTPLLVATLGNFTEVVELLLE 450
           S G TPL  A    +V++   L+++GA V     + +             +T+  + L  
Sbjct: 101 SDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG 160

Query: 451 YKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGD--SNLIHAVKGGHR 508
            +  +  ++K    AL         E+    +  G  + I  R  +       A      
Sbjct: 161 VQEKMGIMNKGVIYALWDYEPQNDDELP---MKEGDCMTIIHREDEDEIEWWWARLNDKE 217

Query: 509 GIV 511
           G V
Sbjct: 218 GYV 220

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 90.0 bits (224), Expect = 2e-20
 Identities = 40/269 (14%), Positives = 70/269 (26%), Gaps = 88/269 (32%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
           K +    + L+ +   G   +V+ ++ +  D  +                          
Sbjct: 32  KFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSL-------------------------- 65

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQ 128
              N      E  TA++ AV  G+  I+K L+    ++  A                   
Sbjct: 66  --PN-----DEGITALHNAVCAGHTEIVKFLVQFGVNVNAA------------------- 99

Query: 129 SYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDN 188
                                    D +G T L  AA    +   + LV  GA V A   
Sbjct: 100 -------------------------DSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTY 134

Query: 189 DN---WSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDK 245
            +    +       EGYT     L      +   + G    L     +   +   L + +
Sbjct: 135 SDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDE---LPMKE 191

Query: 246 NADVNA--HGNYHISSLIWAAGR---GYT 269
              +      +       WA      GY 
Sbjct: 192 GDCMTIIHREDEDEIEWWWARLNDKEGYV 220

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 68.8 bits (169), Expect = 3e-13
 Identities = 7/72 (9%), Positives = 23/72 (31%), Gaps = 2/72 (2%)

Query: 260 LIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVA 319
           L         +  +  +  G +V           L+ +  +G  ++V  ++    +  + 
Sbjct: 9   LPPGKRTNLRKTGSERIAHGMRVKFNP--LPLALLLDSSLEGEFDLVQRIIYEVDDPSLP 66

Query: 320 GLWAYMPLYSSA 331
                  L+++ 
Sbjct: 67  NDEGITALHNAV 78

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 66.5 bits (163), Expect = 2e-12
 Identities = 31/233 (13%), Positives = 57/233 (24%), Gaps = 80/233 (34%)

Query: 5   DVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRST 64
           D S   +  G + L +AV  GH  IV+ L++  V+V             N  D       
Sbjct: 62  DPSLP-NDEGITALHNAVCAGHTEIVKFLVQFGVNV-------------NAAD------- 100

Query: 65  TRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCY 124
                         +  T ++ A    NV + K L+ +   +   T +            
Sbjct: 101 -------------SDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYS------------ 135

Query: 125 RTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVN 184
                                        D           ++G     + L      + 
Sbjct: 136 -----------------------------DMQTAADKCEEMEEGYTQCSQFLYGVQEKMG 166

Query: 185 AEDNDNWSPLTYAAREGYTDVCAELLDHGADL--EHRDMGGWSPLMWASYKGH 235
             +      L     +   ++    +  G  +   HR+        WA     
Sbjct: 167 IMNKGVIYALWDYEPQNDDEL---PMKEGDCMTIIHREDEDEIEWWWARLNDK 216

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  167 bits (427), Expect = 4e-49
 Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 4/156 (2%)

Query: 157 GGTALMFAAQKGKLSFVRELVTR-GADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGAD 215
            G  L  AA +G +  VR L+ R     +A +    + L      G T +  ELL  GA 
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGAS 60

Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
              +D  G SP+  A+  G  DT+ +L++  ADVN         +  A   G+T +V+ L
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120

Query: 276 VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK 311
               + ++  D   G TPL  A ++G  ++VDIL  
Sbjct: 121 A-AESDLHRRDA-RGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  138 bits (350), Expect = 2e-38
 Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 3/154 (1%)

Query: 396 GTTPLVWACRKGHVEIVDILL-KAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
               L  A  +G V+ V  LL +   + D    +  T L V   G+ T +   LL+   +
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGS-TAIALELLKQGAS 60

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
            N  D  G + +  A + G+ +   +L+  GA +N+ D +G   +  AV+ GH  +V  L
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120

Query: 515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLL 548
             +  D+        T +  A+++G   ++ +L 
Sbjct: 121 AAE-SDLHRRDARGLTPLELALQRGAQDLVDILQ 153

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  134 bits (339), Expect = 7e-37
 Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 2/152 (1%)

Query: 126 TLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNA 185
            L    A  ++  ++  L  +    D  +  G TAL      G  +   EL+ +GA  N 
Sbjct: 5   RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNV 63

Query: 186 EDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDK 245
           +D    SP+  AAR G+ D    L++HGAD+   D  G  P+  A  +GHT  V+ L   
Sbjct: 64  QDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-A 122

Query: 246 NADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
            +D++      ++ L  A  RG  ++V +L  
Sbjct: 123 ESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  123 bits (312), Expect = 4e-33
 Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 2/122 (1%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           +G T L      G   I   LLK GA+ +V      +P+  A    F + +++L+E+  +
Sbjct: 35  FGKTALQVMMF-GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGAD 93

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           VN  D  G   + +A ++G+  +   L  + + ++ +D  G + L  A++ G + +V+ L
Sbjct: 94  VNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDIL 152

Query: 515 LK 516
             
Sbjct: 153 QG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  110 bits (279), Expect = 1e-28
 Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 3/110 (2%)

Query: 223 GWSPLMWASYKGHTDTVALLLDKN-ADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAK 281
               L  A+ +G    V  LL +     +A   +  ++L      G T I   L+K+GA 
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGAS 60

Query: 282 VNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSA 331
            NV D   GT+P+  A R G ++ + +L++ GA+V+V      +P++ + 
Sbjct: 61  PNVQDT-SGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAV 109

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  105 bits (266), Expect = 6e-27
 Identities = 32/154 (20%), Positives = 65/154 (42%), Gaps = 3/154 (1%)

Query: 462 GCTALTIACKDGYYEIAVLLLNS-GAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVD 520
               L+ A   G  +    LL+    + +  +R G + L   +  G   I   LLK+   
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGAS 60

Query: 521 VDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQML 580
            ++      + V+ A   G +  LK+L+    D+ +    G  P+  AV+  +   +  L
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120

Query: 581 IDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI 614
              ++ +   D RG T L +A++  ++ +V++  
Sbjct: 121 A-AESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 84.0 bits (209), Expect = 3e-19
 Identities = 30/136 (22%), Positives = 53/136 (38%), Gaps = 6/136 (4%)

Query: 499 LIHAVKGGHRGIVEALLKKY-VDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIA 557
           L  A   G    V  LL +  V  D   +  KTA+   +  G+  I   LL       + 
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGASPNVQ 64

Query: 558 TKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNP 617
              G +P+  A +T  L+ +++L++  A +   D  G   +H+A++     +V       
Sbjct: 65  DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAES 124

Query: 618 KNNILLYRPNKAGETP 633
             +      +  G TP
Sbjct: 125 DLHR----RDARGLTP 136

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 75.5 bits (187), Expect = 3e-16
 Identities = 35/200 (17%), Positives = 57/200 (28%), Gaps = 55/200 (27%)

Query: 18  LIHAVKGGHRGIVEALLKKY-VDVDIPGKVRK--LSDALNVTDANDQRSTTRNLLDK--N 72
           L  A   G    V  LL +  V  D   +  K  L             +    LL +  +
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVM-----MFGSTAIALELLKQGAS 60

Query: 73  KHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIA 132
            +       + V+ A   G +  LK+L+    D+ +                        
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNV------------------------ 96

Query: 133 EDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWS 192
                                D  G   +  A Q+G  + V  L    +D++  D    +
Sbjct: 97  --------------------PDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLT 135

Query: 193 PLTYAAREGYTDVCAELLDH 212
           PL  A + G  D+   L  H
Sbjct: 136 PLELALQRGAQDLVDILQGH 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  163 bits (416), Expect = 1e-47
 Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 3/138 (2%)

Query: 181 ADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVA 240
               +    +   L  AA  G  +    LL+ GA+    +  G  P+      G      
Sbjct: 3   PAAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GSARVAE 61

Query: 241 LLLDKNADVNAHGNYHISS-LIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACR 299
           LLL   A+ N      ++  +  AA  G+ + + +L + GA+++V D  +G  P+  A  
Sbjct: 62  LLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDA-WGRLPVDLAEE 120

Query: 300 KGHVEIVDILLKAGANVD 317
            GH ++   L  A     
Sbjct: 121 LGHRDVARYLRAAAGGTR 138

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  161 bits (411), Expect = 6e-47
 Identities = 35/159 (22%), Positives = 60/159 (37%), Gaps = 8/159 (5%)

Query: 150 ADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAEL 209
           A    +     L  AA +G++  VR L+  GA+ NA ++    P+      G   V   L
Sbjct: 5   AGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GSARVAELL 63

Query: 210 LDHGADLEHRDMGGW-SPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGY 268
           L HGA+    D      P+  A+ +G  DT+ +L    A ++    +    +  A   G+
Sbjct: 64  LLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGH 123

Query: 269 TEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVD 307
            ++   L              G+        +G  +I D
Sbjct: 124 RDVARYLRAAAGGTR------GSNHARIDAAEGPSDIPD 156

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  132 bits (336), Expect = 2e-36
 Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 2/143 (1%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
               L  A  +G VE V  LL+AGAN +    Y   P+ V  +G+   V ELLL +    
Sbjct: 12  SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGS-ARVAELLLLHGAEP 70

Query: 456 NALDKDGCT-ALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           N  D    T  +  A ++G+ +  V+L  +GA ++++D  G   +  A + GHR +   L
Sbjct: 71  NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 130

Query: 515 LKKYVDVDIPGKERKTAVYTAVE 537
                        R  A     +
Sbjct: 131 RAAAGGTRGSNHARIDAAEGPSD 153

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  131 bits (331), Expect = 8e-36
 Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 3/122 (2%)

Query: 210 LDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYT 269
           ++  A            L  A+ +G  + V  LL+  A+ NA  +Y    +      G  
Sbjct: 1   MEPAAGSSMEP--SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSA 57

Query: 270 EIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYS 329
            +  LL+  GA+ N  D    T P+  A R+G ++ + +L +AGA +DV   W  +P+  
Sbjct: 58  RVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDL 117

Query: 330 SA 331
           + 
Sbjct: 118 AE 119

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  118 bits (298), Expect = 3e-31
 Identities = 31/152 (20%), Positives = 51/152 (33%), Gaps = 6/152 (3%)

Query: 416 LKAGANVDV-AGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGY 474
           ++  A   +         L  A      E V  LLE   N NA +  G   + +    G 
Sbjct: 1   MEPAAGSSMEPS---ADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GS 56

Query: 475 YEIAVLLLNSGAYINIQDRSGDSN-LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVY 533
             +A LLL  GA  N  D +  +  +  A + G    +  L +    +D+     +  V 
Sbjct: 57  ARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVD 116

Query: 534 TAVEKGNVPILKLLLTANPDLEIATKDGDTPL 565
            A E G+  + + L  A      +        
Sbjct: 117 LAEELGHRDVARYLRAAAGGTRGSNHARIDAA 148

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  110 bits (278), Expect = 1e-28
 Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 7/119 (5%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWT-PLLVATLGNFTEVVELLLEYKP 453
           YG  P+      G   + ++LL  GA  + A     T P+  A    F + + +L     
Sbjct: 44  YGRRPIQVMMM-GSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGA 102

Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVE 512
            ++  D  G   + +A + G+ ++A  L  +       +     +       G   I +
Sbjct: 103 RLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSN-----HARIDAAEGPSDIPD 156

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  109 bits (274), Expect = 5e-28
 Identities = 38/205 (18%), Positives = 65/205 (31%), Gaps = 52/205 (25%)

Query: 276 VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADI 335
           ++  A  ++         L  A  +G VE V  LL+AGAN +    +   P+        
Sbjct: 1   MEPAAGSSMEP---SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQ------- 50

Query: 336 FSEPGLATPLTVGLYAKWGSGK--SFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHL 393
                             GS +    LL             G +P               
Sbjct: 51  --------------VMMMGSARVAELLL-----------LHGAEPN----------CADP 75

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKP 453
           +  T P+  A R+G ++ + +L +AGA +DV   +   P+ +A      +V   L     
Sbjct: 76  ATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAG 135

Query: 454 NVNALDKDGCTALTIACKDGYYEIA 478
                +     A      +G  +I 
Sbjct: 136 GTRGSNHARIDAA-----EGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 91.0 bits (227), Expect = 1e-21
 Identities = 31/230 (13%), Positives = 54/230 (23%), Gaps = 84/230 (36%)

Query: 11  DRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLD 70
                  L  A   G    V ALL+   +              N  ++  +         
Sbjct: 9   MEPSADWLATAAARGRVEEVRALLEAGANP-------------NAPNSYGR--------- 46

Query: 71  KNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSY 130
                        +   +  G+  + +LLL    +   A                     
Sbjct: 47  -----------RPIQVMM-MGSARVAELLLLHGAEPNCA--------------------- 73

Query: 131 IAEDNLDSLQTFLENKRTVADDRDDNGGT-ALMFAAQKGKLSFVRELVTRGADVNAEDND 189
                                  D    T  +  AA++G L  +  L   GA ++  D  
Sbjct: 74  -----------------------DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAW 110

Query: 190 NWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTV 239
              P+  A   G+ DV   L          +          + +G +D  
Sbjct: 111 GRLPVDLAEELGHRDVARYLRAAAGGTRGSN-----HARIDAAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 84.5 bits (210), Expect = 2e-19
 Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 4/136 (2%)

Query: 482 LNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNV 541
           +   A            L  A   G    V ALL+   + + P    +  +   +  G+ 
Sbjct: 1   MEPAA--GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSA 57

Query: 542 PILKLLLTANPDLEIATKDGDT-PLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHI 600
            + +LLL    +   A     T P+  A +   L+ + +L    A++   D  G   + +
Sbjct: 58  RVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDL 117

Query: 601 AMRARSKTIVEVFIRN 616
           A     + +       
Sbjct: 118 AEELGHRDVARYLRAA 133

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  163 bits (415), Expect = 2e-47
 Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 2/154 (1%)

Query: 156 NGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGAD 215
           + G  L+ AA+ G+   VR L+  GA     D    SPL  AA+ G+      LL  G  
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFTT-DWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
            + R     +PL  A+ +GH + V +LL   ADVNA     +++L WA    + E+V LL
Sbjct: 60  RDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELL 119

Query: 276 VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDIL 309
           +K GA V+   K +  T    +   G+ ++ +IL
Sbjct: 120 IKYGADVHTQSK-FCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  137 bits (347), Expect = 5e-38
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 1/152 (0%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
               L+ A R G  + V IL+  GA          +PL +A         E+LL    + 
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           +A  K   T L +A  +G+  I  +LL  GA +N +D    + L  A +  H+ +VE L+
Sbjct: 61  DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120

Query: 516 KKYVDVDIPGKERKTAVYTAVEKGNVPILKLL 547
           K   DV    K  KTA   +++ GN  + ++L
Sbjct: 121 KYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  135 bits (344), Expect = 1e-37
 Identities = 47/129 (36%), Positives = 61/129 (47%), Gaps = 2/129 (1%)

Query: 189 DNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNAD 248
           D    L  AAR G  D    L+ +GA     D  G SPL  A+  GH  T  +LL     
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 249 VNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDI 308
            +A      + L  AA  G+  IV +L+K GA VN  D     T L WA    H E+V++
Sbjct: 60  RDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDM-LKMTALHWATEHNHQEVVEL 118

Query: 309 LLKAGANVD 317
           L+K GA+V 
Sbjct: 119 LIKYGADVH 127

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  130 bits (331), Expect = 9e-36
 Identities = 37/122 (30%), Positives = 59/122 (48%)

Query: 154 DDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHG 213
           D  G + L  AAQ G  S    L+  G   +A    + +PL  AA EG+ ++   LL HG
Sbjct: 31  DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHG 90

Query: 214 ADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVA 273
           AD+  +DM   + L WA+   H + V LL+   ADV+    +  ++   +   G  ++  
Sbjct: 91  ADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAE 150

Query: 274 LL 275
           +L
Sbjct: 151 IL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  125 bits (317), Expect = 7e-34
 Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 1/122 (0%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            GT+PL  A + GH    ++LL+AG + D       TPL +A       +VE+LL++  +
Sbjct: 33  LGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGAD 92

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           VNA D    TAL  A +  + E+  LL+  GA ++ Q +   +    ++  G+  + E +
Sbjct: 93  VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAE-I 151

Query: 515 LK 516
           L+
Sbjct: 152 LQ 153

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  120 bits (303), Expect = 6e-32
 Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 1/151 (0%)

Query: 430 WTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYIN 489
              LL A      + V +L+         D  G + L +A + G++    +LL +G   +
Sbjct: 3   GKKLLEAARAGQDDEVRILMANGAPFTT-DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD 61

Query: 490 IQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLT 549
            + +   + L  A   GH  IVE LLK   DV+     + TA++ A E  +  +++LL+ 
Sbjct: 62  ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIK 121

Query: 550 ANPDLEIATKDGDTPLLKAVKTRNLEAIQML 580
              D+   +K   T    ++   N +  ++L
Sbjct: 122 YGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  102 bits (258), Expect = 7e-26
 Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 2/109 (1%)

Query: 223 GWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKV 282
               L+ A+  G  D V +L+   A          S L  AA  G+     +L++ G   
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGAPFTT-DWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60

Query: 283 NVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSA 331
           +   K    TPL  A  +GH  IV++LLK GA+V+   +     L+ + 
Sbjct: 61  DARTK-VDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWAT 108

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  100 bits (252), Expect = 5e-25
 Identities = 26/92 (28%), Positives = 42/92 (45%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
           D R     T L  AA +G  + V  L+  GADVNA+D    + L +A    + +V   L+
Sbjct: 61  DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120

Query: 211 DHGADLEHRDMGGWSPLMWASYKGHTDTVALL 242
            +GAD+  +     +    +   G+ D   +L
Sbjct: 121 KYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 88.2 bits (220), Expect = 9e-21
 Identities = 41/187 (21%), Positives = 63/187 (33%), Gaps = 49/187 (26%)

Query: 461 DGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVD 520
           D    L  A + G  +   +L+ +GA     D  G S L  A + GH    E LL+  V 
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 521 VDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQML 580
            D               +                   TK   TPL  A    +   +++L
Sbjct: 60  RD--------------AR-------------------TKVDRTPLHMAASEGHANIVEVL 86

Query: 581 IDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIR-----NPKNNILLYRPNKAGETP-- 633
           +   A + A D    T LH A     + +VE+ I+     + ++           +T   
Sbjct: 87  LKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKF--------CKTAFD 138

Query: 634 YSIDMNN 640
            SID  N
Sbjct: 139 ISIDNGN 145

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 67.8 bits (167), Expect = 1e-13
 Identities = 36/200 (18%), Positives = 58/200 (29%), Gaps = 78/200 (39%)

Query: 11  DRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLD 70
           D  G S L  A + GH    E LL+  V  D                             
Sbjct: 31  DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA---------------------------- 62

Query: 71  KNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSY 130
           + K       +T ++ A  +G+  I+++LL    D+                        
Sbjct: 63  RTKV-----DRTPLHMAASEGHANIVEVLLKHGADVNA---------------------- 95

Query: 131 IAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDN 190
                                 +D    TAL +A +      V  L+  GADV+ +    
Sbjct: 96  ----------------------KDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFC 133

Query: 191 WSPLTYAAREGYTDVCAELL 210
            +    +   G  D+ AE+L
Sbjct: 134 KTAFDISIDNGNEDL-AEIL 152

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  161 bits (410), Expect = 1e-46
 Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 3/164 (1%)

Query: 152 DRDDNGGTALMFAAQKGKLSFVRELVTR-GADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
             +      L+ AA+ G +  V++L T    +    +    +PL +AA      V   LL
Sbjct: 3   MGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLL 62

Query: 211 DHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTE 270
            HGAD+  +D GG  PL  A   GH +   LL+   A VN    +  + L  AA +G  E
Sbjct: 63  QHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYE 122

Query: 271 IVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGA 314
           I  LL++ GA     ++  G TPL    + G  +I D+L    A
Sbjct: 123 ICKLLLQHGADPTKKNR-DGNTPLDLV-KDGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  139 bits (353), Expect = 1e-38
 Identities = 44/139 (31%), Positives = 62/139 (44%), Gaps = 5/139 (3%)

Query: 180 GADVNAEDNDNWSPLTYAAREGYTDVCAELLD-HGADLEHRDMGGWSPLMWASYKGHTDT 238
           GA  N   ++    L  AA+ G  +   +L      +    +    +PL +A+       
Sbjct: 1   GAMGN---SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSV 57

Query: 239 VALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWAC 298
           V  LL   ADV+A     +  L  A   G+ E+  LLVK GA VNV D  +  TPL  A 
Sbjct: 58  VEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADL-WKFTPLHEAA 116

Query: 299 RKGHVEIVDILLKAGANVD 317
            KG  EI  +LL+ GA+  
Sbjct: 117 AKGKYEICKLLLQHGADPT 135

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  131 bits (332), Expect = 1e-35
 Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 1/131 (0%)

Query: 150 ADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAEL 209
             D +    T L FAA   ++S V  L+  GADV+A+D     PL  A   G+ +V   L
Sbjct: 35  CRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELL 94

Query: 210 LDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYT 269
           + HGA +   D+  ++PL  A+ KG  +   LLL   AD         + L      G T
Sbjct: 95  VKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVK-DGDT 153

Query: 270 EIVALLVKKGA 280
           +I  LL    A
Sbjct: 154 DIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  129 bits (327), Expect = 5e-35
 Identities = 49/156 (31%), Positives = 68/156 (43%), Gaps = 2/156 (1%)

Query: 394 SYGTTPLVWACRKGHVEIVDILLKA-GANVDVAGLYCWTPLLVATLGNFTEVVELLLEYK 452
           S     L+ A + G VE V  L      N         TPL  A   N   VVE LL++ 
Sbjct: 6   SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG 65

Query: 453 PNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVE 512
            +V+A DK G   L  AC  G+YE+A LL+  GA +N+ D    + L  A   G   I +
Sbjct: 66  ADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICK 125

Query: 513 ALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLL 548
            LL+   D     ++  T +    + G+  I  LL 
Sbjct: 126 LLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLR 160

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  120 bits (304), Expect = 6e-32
 Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 5/168 (2%)

Query: 419 GANVDVAGLYCWTPLLVATLGNFTEVVELLLEYK-PNVNALDKDGCTALTIACKDGYYEI 477
           GA  +         LL A      E V+ L   +  N   ++    T L  A       +
Sbjct: 1   GAMGNSEA---DRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSV 57

Query: 478 AVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVE 537
              LL  GA ++ +D+ G   L +A   GH  + E L+K    V++    + T ++ A  
Sbjct: 58  VEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAA 117

Query: 538 KGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKA 585
           KG   I KLLL    D     +DG+TPL       + +   +L    A
Sbjct: 118 KGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  119 bits (301), Expect = 1e-31
 Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 1/123 (0%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
             +TPL +A     V +V+ LL+ GA+V         PL  A      EV ELL+++   
Sbjct: 41  RQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAV 100

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           VN  D    T L  A   G YEI  LLL  GA    ++R G++ L   VK G   I + L
Sbjct: 101 VNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL-DLVKDGDTDIQDLL 159

Query: 515 LKK 517
              
Sbjct: 160 RGD 162

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  109 bits (274), Expect = 7e-28
 Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 2/110 (1%)

Query: 223 GWSPLMWASYKGHTDTVALLLDKN-ADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAK 281
               L+ A+  G  +TV  L      +         + L +AAG     +V  L++ GA 
Sbjct: 8   ADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD 67

Query: 282 VNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSA 331
           V+  DK  G  PL  AC  GH E+ ++L+K GA V+VA LW + PL+ +A
Sbjct: 68  VHAKDK-GGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAA 116

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 95.9 bits (240), Expect = 2e-23
 Identities = 48/239 (20%), Positives = 69/239 (28%), Gaps = 81/239 (33%)

Query: 11  DRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLD 70
           +   D  L+ A K G    V+ L                  ++N  D             
Sbjct: 5   NSEADRQLLEAAKAGDVETVKKLCTV--------------QSVNCRDIE----------- 39

Query: 71  KNKHKSLKERKTAVYTAVEKGNVPILKLLLT--ANPDLEIATKTLPRSDSMVSLCYRTLQ 128
                    + T ++ A     V +++ LL   A+                         
Sbjct: 40  -------GRQSTPLHFAAGYNRVSVVEYLLQHGADV------------------------ 68

Query: 129 SYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDN 188
                                   +D  G   L  A   G       LV  GA VN  D 
Sbjct: 69  ----------------------HAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADL 106

Query: 189 DNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNA 247
             ++PL  AA +G  ++C  LL HGAD   ++  G +PL      G TD   LL    A
Sbjct: 107 WKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 63.6 bits (156), Expect = 4e-12
 Identities = 35/208 (16%), Positives = 55/208 (26%), Gaps = 82/208 (39%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
             +    + L  A       +VE LL+   DV             +  D           
Sbjct: 37  DIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-------------HAKD----------- 72

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLT--ANPDLEIATKTLPRSDSMVSLCYRT 126
                    K     ++ A   G+  + +LL+   A                        
Sbjct: 73  ---------KGGLVPLHNACSYGHYEVAELLVKHGAVV---------------------- 101

Query: 127 LQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAE 186
                                   +  D    T L  AA KGK    + L+  GAD   +
Sbjct: 102 ------------------------NVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKK 137

Query: 187 DNDNWSPLTYAAREGYTDVCAELLDHGA 214
           + D  +PL    ++G TD+   L    A
Sbjct: 138 NRDGNTPL-DLVKDGDTDIQDLLRGDAA 164

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  163 bits (416), Expect = 1e-46
 Identities = 37/171 (21%), Positives = 64/171 (37%), Gaps = 6/171 (3%)

Query: 149 VADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAE 208
           +       G    +   + G            ADV    ++  +P   AAR+        
Sbjct: 7   IGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVV---SEYETPWWTAARKADEQA-LS 62

Query: 209 LLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNA-HGNYHISSLIWAAGRG 267
            L    D++  D  G + L++ +  G    V LL +  AD++       +++L  AAG  
Sbjct: 63  QLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 122

Query: 268 YTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDV 318
             E+V  LV+ GA + V D+  G T L  A            ++ G  + +
Sbjct: 123 RPEVVEALVELGADIEVEDE-RGLTALELAREILKTTPKGNPMQFGRRIGL 172

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  161 bits (410), Expect = 9e-46
 Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 6/168 (3%)

Query: 152 DRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLD 211
           D      T    AA+K     + +L+    DV+A D +  + L + A  G       L +
Sbjct: 40  DVVSEYETPWWTAARKADEQALSQLL-EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAE 98

Query: 212 HGADLEHRDM-GGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTE 270
            GADL+HRDM GG + L  A+     + V  L++  AD+       +++L  A     T 
Sbjct: 99  AGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTT 158

Query: 271 IVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDV 318
                ++ G ++ +         ++      + E+ +I+ K G   DV
Sbjct: 159 PKGNPMQFGRRIGLEK----VINVLEGQVFEYAEVDEIVEKRGKGKDV 202

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  151 bits (383), Expect = 6e-42
 Identities = 44/222 (19%), Positives = 76/222 (34%), Gaps = 16/222 (7%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G    +   + GH           A+V        TP   A      + +  LLE   +V
Sbjct: 15  GAMEYLIEWKDGHSPSWVPSSYIAADVVSEY---ETPWWTAARKADEQALSQLLE-DRDV 70

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD-RSGDSNLIHAVKGGHRGIVEAL 514
           +A+D++G TAL      G  +   LL  +GA ++ +D R G + L  A       +VEAL
Sbjct: 71  DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEAL 130

Query: 515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
           ++   D+++  +   TA+  A E          +       I  +              L
Sbjct: 131 VELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRR--IGLEK---------VINVL 179

Query: 575 EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN 616
           E       +  +I     +G  V ++           V   +
Sbjct: 180 EGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVH 221

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  147 bits (374), Expect = 1e-40
 Identities = 47/241 (19%), Positives = 74/241 (30%), Gaps = 34/241 (14%)

Query: 82  TAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDN-LDSLQ 140
                  + G+ P          D+                 Y T     A      +L 
Sbjct: 17  MEYLIEWKDGHSPSWVPSSYIAADVVSE--------------YETPWWTAARKADEQALS 62

Query: 141 TFLENKRTVAD--DRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAED-NDNWSPLTYA 197
             LE+     D    D+NG TAL+F A  G    VR L   GAD++  D     + L  A
Sbjct: 63  QLLED----RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMA 118

Query: 198 AREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHI 257
           A     +V   L++ GAD+E  D  G + L  A     T      +     +       +
Sbjct: 119 AGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEK---V 175

Query: 258 SSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
            +++      Y E+  ++ K+G          G         K   +   +     A   
Sbjct: 176 INVLEGQVFEYAEVDEIVEKRGK---------GKDVEYLVRWKDGGDCEWVKGVHVAEDV 226

Query: 318 V 318
            
Sbjct: 227 A 227

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  142 bits (360), Expect = 1e-38
 Identities = 40/207 (19%), Positives = 68/207 (32%), Gaps = 15/207 (7%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
             TP   A RK   + +  LL+   +VD       T LL        + V LL E   ++
Sbjct: 45  YETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL 103

Query: 456 NALD-KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           +  D + G TAL +A      E+   L+  GA I ++D  G + L  A +          
Sbjct: 104 DHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNP 163

Query: 515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
           ++    +   G E+   V          + +++             G             
Sbjct: 164 MQFGRRI---GLEKVINVLEGQVFEYAEVDEIVEKRG--------KGKDVEYLVRWKDGG 212

Query: 575 EAIQMLIDKKAKITAVDKRGDTVLHIA 601
           +   +     A+  A D   +  L  A
Sbjct: 213 DCEWVKGVHVAEDVAKDY--EDGLEYA 237

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  137 bits (347), Expect = 6e-37
 Identities = 42/241 (17%), Positives = 83/241 (34%), Gaps = 22/241 (9%)

Query: 184 NAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLL 243
           +    +         ++G++          AD+        +P   A+ K     ++ LL
Sbjct: 9   SRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSE---YETPWWTAARKADEQALSQLL 65

Query: 244 DKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHV 303
            ++ DV+A      ++L++ AG G  + V LL + GA ++  D   G T L  A      
Sbjct: 66  -EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRP 124

Query: 304 EIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPK 363
           E+V+ L++ GA+++V        L    LA    E    T    G   ++G         
Sbjct: 125 EVVEALVELGADIEVEDERGLTALE---LA---REILKTT--PKGNPMQFGR-------- 168

Query: 364 LKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVD 423
            +  ++          F ++ +  ++      G         K   +   +     A   
Sbjct: 169 -RIGLEKVINVLEGQVFEYAEVDEIVEKR-GKGKDVEYLVRWKDGGDCEWVKGVHVAEDV 226

Query: 424 V 424
            
Sbjct: 227 A 227

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  129 bits (327), Expect = 3e-34
 Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 18/180 (10%)

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYC-WTPLLVATLGNFTEVVELLLEYK 452
             G T L++    G  + V +L +AGA++D   +    T L +A      EVVE L+E  
Sbjct: 75  ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELG 134

Query: 453 PNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVE 512
            ++   D+ G TAL +A +          +  G  I ++      N++      +  + E
Sbjct: 135 ADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEK---VINVLEGQVFEYAEVDE 191

Query: 513 ALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLT--ANPDLEIATKDGDTPLLKAVK 570
            + K+         + K   Y    K       +     A        KD +  L  AV 
Sbjct: 192 IVEKR--------GKGKDVEYLVRWKDGGDCEWVKGVHVAE----DVAKDYEDGLEYAVA 239

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  117 bits (295), Expect = 8e-30
 Identities = 39/294 (13%), Positives = 74/294 (25%), Gaps = 93/294 (31%)

Query: 11  DRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLD 70
               ++    A +      +  LL+   D D+           +  D             
Sbjct: 42  VSEYETPWWTAARKADEQALSQLLE---DRDV-----------DAVD------------- 74

Query: 71  KNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSY 130
                  +  +TA+      G+   ++LL  A  DL+                       
Sbjct: 75  -------ENGRTALLFVAGLGSDKCVRLLAEAGADLDH---------------------- 105

Query: 131 IAEDNLDSLQTFLENKRTVADDRDDNGG-TALMFAAQKGKLSFVRELVTRGADVNAEDND 189
                                 RD  GG TAL  AA   +   V  LV  GAD+  ED  
Sbjct: 106 ----------------------RDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDER 143

Query: 190 NWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADV 249
             + L  A     T      +  G  +    +     ++      + +   ++  +    
Sbjct: 144 GLTALELAREILKTTPKGNPMQFGRRIGLEKV---INVLEGQVFEYAEVDEIVEKRGKGK 200

Query: 250 NAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHV 303
           +               +   +   +     A+    D       L +A  +  +
Sbjct: 201 DV--------EYLVRWKDGGDCEWVKGVHVAEDVAKDY---EDGLEYAVAESVI 243

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  111 bits (280), Expect = 6e-28
 Identities = 36/160 (22%), Positives = 60/160 (37%), Gaps = 5/160 (3%)

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           +    +G     I  KDG+    V      A +       ++    A +      +  LL
Sbjct: 9   SRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVV---SEYETPWWTAARKADEQALSQLL 65

Query: 516 KKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIA-TKDGDTPLLKAVKTRNL 574
           +   DVD   +  +TA+      G+   ++LL  A  DL+    + G T L  A      
Sbjct: 66  ED-RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRP 124

Query: 575 EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI 614
           E ++ L++  A I   D+RG T L +A      T     +
Sbjct: 125 EVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPM 164

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 9/78 (11%), Positives = 21/78 (26%), Gaps = 10/78 (12%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
               ++      + E+ +I+ K G               +    +  +   +   +    
Sbjct: 174 KVINVLEGQVFEYAEVDEIVEKRGKG--------KDVEYLVRWKDGGDCEWVKGVHVAED 225

Query: 456 NALDKDGCTALTIACKDG 473
            A  KD    L  A  + 
Sbjct: 226 VA--KDYEDGLEYAVAES 241

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  159 bits (404), Expect = 4e-45
 Identities = 56/221 (25%), Positives = 89/221 (40%), Gaps = 2/221 (0%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
                  A      E+ + +L   +          T L  A     TE+VE LL+    V
Sbjct: 7   NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 66

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           N  D  G + L IA   G  EI   LL  GA++N  +++G + L +A       I   LL
Sbjct: 67  NDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLL 126

Query: 516 KKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLE 575
           +   + D       TA++ A  KGN+ ++ +LL       I   +G+TPL  A     +E
Sbjct: 127 EGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVE 186

Query: 576 AIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN 616
             + L+ + A I   +K   T L +A       ++   +  
Sbjct: 187 EAKFLVTQGASIYIENKEEKTPLQVA--KGGLGLILKRLAE 225

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  155 bits (392), Expect = 2e-43
 Identities = 60/270 (22%), Positives = 97/270 (35%), Gaps = 43/270 (15%)

Query: 155 DNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGA 214
            +       A           ++   +     D D+ + L +A   G+T++   LL  G 
Sbjct: 5   VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGV 64

Query: 215 DLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVAL 274
            +  +D  GWSPL  A+  G  + V  LL K A VNA      + L +AA +   EI  +
Sbjct: 65  PVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVM 124

Query: 275 LVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALAD 334
           L++ GA  +  D  Y  T +  A  KG++++V ILL   A+ ++       PL+ +   +
Sbjct: 125 LLEGGANPDAKDH-YDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEE 183

Query: 335 IFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLS 394
                                          EE K    QG               +   
Sbjct: 184 -----------------------------RVEEAKFLVTQGASIY-----------IENK 203

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDV 424
              TPL  A  KG + ++   L  G    +
Sbjct: 204 EEKTPLQVA--KGGLGLILKRLAEGEEASM 231

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  151 bits (383), Expect = 3e-42
 Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 1/206 (0%)

Query: 126 TLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNA 185
            + +      LD L+  +   +++A   D +  TAL +A   G    V  L+  G  VN 
Sbjct: 9   MICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND 68

Query: 186 EDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDK 245
           +D+  WSPL  AA  G  ++   LL  GA +   +  G +PL +A+ K   +   +LL+ 
Sbjct: 69  KDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEG 128

Query: 246 NADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEI 305
            A+ +A  +Y  +++  AA +G  ++V +L+   A  N+ D   G TPL  AC +  VE 
Sbjct: 129 GANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDT-EGNTPLHLACDEERVEE 187

Query: 306 VDILLKAGANVDVAGLWAYMPLYSSA 331
              L+  GA++ +       PL  + 
Sbjct: 188 AKFLVTQGASIYIENKEEKTPLQVAK 213

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  144 bits (365), Expect = 1e-39
 Identities = 60/193 (31%), Positives = 91/193 (47%), Gaps = 2/193 (1%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
              T L WAC  GH EIV+ LL+ G  V+      W+PL +A      E+V+ LL    +
Sbjct: 39  DSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAH 98

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           VNA++++GCT L  A     +EIAV+LL  GA  + +D    + +  A   G+  +V  L
Sbjct: 99  VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHIL 158

Query: 515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL 574
           L      +I   E  T ++ A ++  V   K L+T    + I  K+  TPL  A     L
Sbjct: 159 LFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVA--KGGL 216

Query: 575 EAIQMLIDKKAKI 587
             I   + +  + 
Sbjct: 217 GLILKRLAEGEEA 229

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  143 bits (361), Expect = 4e-39
 Identities = 57/211 (27%), Positives = 87/211 (41%), Gaps = 3/211 (1%)

Query: 430 WTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYIN 489
                +A  G   E+ E +L  K      D+D  TAL  AC  G+ EI   LL  G  +N
Sbjct: 8   IMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVN 67

Query: 490 IQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLT 549
            +D +G S L  A   G   IV+ALL K   V+   +   T ++ A  K    I  +LL 
Sbjct: 68  DKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLE 127

Query: 550 ANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTI 609
              + +       T + +A    NL+ + +L+  KA     D  G+T LH+A        
Sbjct: 128 GGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEE 187

Query: 610 VEVFIRNPKNNILLYRPNKAGETPYSIDMNN 640
            +  +    +   +Y  NK  +TP  +    
Sbjct: 188 AKFLVTQGAS---IYIENKEEKTPLQVAKGG 215

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  141 bits (358), Expect = 1e-38
 Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 3/168 (1%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
           +D+DD G + L  AA  G    V+ L+ +GA VNA + +  +PL YAA +   ++   LL
Sbjct: 67  NDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLL 126

Query: 211 DHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTE 270
           + GA+ + +D    + +  A+ KG+   V +LL   A  N       + L  A      E
Sbjct: 127 EGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVE 186

Query: 271 IVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDV 318
               LV +GA + + +K    TPL  A  KG + ++   L  G    +
Sbjct: 187 EAKFLVTQGASIYIENK-EEKTPLQVA--KGGLGLILKRLAEGEEASM 231

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  136 bits (344), Expect = 1e-36
 Identities = 65/264 (24%), Positives = 99/264 (37%), Gaps = 43/264 (16%)

Query: 260 LIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVA 319
              A      E+   ++   +     D+    T L WAC  GH EIV+ LL+ G  V+  
Sbjct: 11  CNLAYSGKLDELKERILADKSLATRTDQ-DSRTALHWACSAGHTEIVEFLLQLGVPVNDK 69

Query: 320 GLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPT 379
               + PL+ +A A                                E +K    +G    
Sbjct: 70  DDAGWSPLHIAASAGX-----------------------------DEIVKALLVKGAHVN 100

Query: 380 FTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLG 439
                           G TPL +A  K   EI  +LL+ GAN D    Y  T +  A   
Sbjct: 101 -----------AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAK 149

Query: 440 NFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNL 499
              ++V +LL YK + N  D +G T L +AC +   E A  L+  GA I I+++   + L
Sbjct: 150 GNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPL 209

Query: 500 IHAVKGGHRGIVEALLKKYVDVDI 523
             A   G  G++   L +  +  +
Sbjct: 210 QVA--KGGLGLILKRLAEGEEASM 231

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  111 bits (280), Expect = 4e-28
 Identities = 48/276 (17%), Positives = 89/276 (32%), Gaps = 79/276 (28%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
           + D+   + L  A   GH  IVE LL+  V V+                           
Sbjct: 35  RTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND-------------------------- 68

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQ 128
             K+         + ++ A   G   I+K LL     +                      
Sbjct: 69  --KDDAG-----WSPLHIAASAGXDEIVKALLVKGAHV---------------------- 99

Query: 129 SYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDN 188
                                 +  + NG T L +AA K +      L+  GA+ +A+D+
Sbjct: 100 ----------------------NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDH 137

Query: 189 DNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNAD 248
            + + +  AA +G   +   LL + A    +D  G +PL  A  +   +    L+ + A 
Sbjct: 138 YDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGAS 197

Query: 249 VNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNV 284
           +        + L  A   G   ++   + +G + ++
Sbjct: 198 IYIENKEEKTPLQVAK--GGLGLILKRLAEGEEASM 231

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  109 bits (274), Expect = 2e-27
 Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 3/187 (1%)

Query: 461 DGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVD 520
                  +A      E+   +L   +     D+   + L  A   GH  IVE LL+  V 
Sbjct: 6   SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP 65

Query: 521 VDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQML 580
           V+       + ++ A   G   I+K LL     +    ++G TPL  A      E   ML
Sbjct: 66  VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVML 125

Query: 581 IDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNN 640
           ++  A   A D    T +H A    +  +V + +    +       +  G TP  +  + 
Sbjct: 126 LEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAS---TNIQDTEGNTPLHLACDE 182

Query: 641 QKSILAQ 647
           ++   A+
Sbjct: 183 ERVEEAK 189

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  155 bits (395), Expect = 5e-45
 Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 2/136 (1%)

Query: 180 GADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTV 239
           G D    ++   + L  A+ +G       LL +G+D   +D  GW+PL  A   GH   V
Sbjct: 1   GIDPFT-NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVV 59

Query: 240 ALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACR 299
            LLL   A VN  G  + S L  AA  G+ +IV LL+  GA  N  +  +G  P+ +   
Sbjct: 60  ELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNI-FGLRPVDYTDD 118

Query: 300 KGHVEIVDILLKAGAN 315
           +    ++ +  K  ++
Sbjct: 119 ESMKSLLLLPEKNESS 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  143 bits (363), Expect = 2e-40
 Identities = 38/128 (29%), Positives = 56/128 (43%)

Query: 153 RDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDH 212
            +  G T L  A+ KG +  V  L+  G+D N +D+  W+PL  A   G+  V   LL H
Sbjct: 6   TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQH 65

Query: 213 GADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIV 272
            A +        SPL  A+  GH D V LLL   A  NA   + +  + +        ++
Sbjct: 66  KALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLL 125

Query: 273 ALLVKKGA 280
            L  K  +
Sbjct: 126 LLPEKNES 133

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  128 bits (325), Expect = 3e-35
 Identities = 38/122 (31%), Positives = 58/122 (47%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            G T L  A  KG +  V+ LL+ G++ +V     WTPL  A      +VVELLL++K  
Sbjct: 9   RGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL 68

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
           VN       + L  A K+G+ +I  LLL+ GA  N  +  G   + +      + ++   
Sbjct: 69  VNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLP 128

Query: 515 LK 516
            K
Sbjct: 129 EK 130

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  119 bits (300), Expect = 8e-32
 Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 2/119 (1%)

Query: 213 GADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIV 272
           G D    +  G + L  AS KG   +V  LL   +D N   +   + L  A   G+ ++V
Sbjct: 1   GIDPF-TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVV 59

Query: 273 ALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSA 331
            LL++  A VN        +PL  A + GHV+IV +LL  GA+ +   ++   P+  + 
Sbjct: 60  ELLLQHKALVNTTGY-QNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTD 117

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  113 bits (286), Expect = 6e-30
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 1/99 (1%)

Query: 153 RDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDH 212
           +D  G T L  A   G L  V  L+   A VN     N SPL  AA+ G+ D+   LL +
Sbjct: 39  KDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSY 98

Query: 213 GADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNA 251
           GA     ++ G  P+ +   +     + LL +KN   +A
Sbjct: 99  GASRNAVNIFGLRPVDYTDDESMKS-LLLLPEKNESSSA 136

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  112 bits (284), Expect = 1e-29
 Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 5/132 (3%)

Query: 419 GANV--DVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYE 476
           G +   +  G    T L +A++      VE LL+   + N  D  G T L  AC  G+ +
Sbjct: 1   GIDPFTNHRG---ETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLK 57

Query: 477 IAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAV 536
           +  LLL   A +N      DS L  A K GH  IV+ LL      +         V    
Sbjct: 58  VVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTD 117

Query: 537 EKGNVPILKLLL 548
           ++    +L L  
Sbjct: 118 DESMKSLLLLPE 129

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  107 bits (271), Expect = 9e-28
 Identities = 26/92 (28%), Positives = 46/92 (50%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            G TPL  AC  GH+++V++LL+  A V+  G    +PL  A      ++V+LLL Y  +
Sbjct: 42  AGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGAS 101

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGA 486
            NA++  G   +     +    + +L   + +
Sbjct: 102 RNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  102 bits (256), Expect = 9e-26
 Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 1/136 (0%)

Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEA 513
           +    +  G T L IA   G       LL +G+  N++D +G + L  A   GH  +VE 
Sbjct: 3   DPFT-NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVEL 61

Query: 514 LLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRN 573
           LL+    V+  G +  + ++ A + G+V I+KLLL+           G  P+        
Sbjct: 62  LLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESM 121

Query: 574 LEAIQMLIDKKAKITA 589
              + +    ++   +
Sbjct: 122 KSLLLLPEKNESSSAS 137

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 72.1 bits (178), Expect = 2e-15
 Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
           +       + L  AA+ G +  V+ L++ GA  NA +     P+ Y   E    +   L 
Sbjct: 70  NTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSL-LLLP 128

Query: 211 DHGAD 215
           +    
Sbjct: 129 EKNES 133

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 64.4 bits (158), Expect = 1e-12
 Identities = 14/63 (22%), Positives = 30/63 (47%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
              +PL  A + GHV+IV +LL  GA+ +   ++   P+      +   ++ L  + + +
Sbjct: 75  QNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134

Query: 455 VNA 457
             +
Sbjct: 135 SAS 137

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  155 bits (394), Expect = 1e-43
 Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 5/171 (2%)

Query: 150 ADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAEL 209
           A     N    L+ AA  G+L  V++ V    D +  + +  + L  A       +   L
Sbjct: 14  ARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFL 73

Query: 210 LDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNA-HGNYHISSLIWAAG--R 266
           +  GA++   D  GW+PL  A+    T     L+   A + A   +   ++         
Sbjct: 74  ITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYRE 133

Query: 267 GYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
           GY +    L      + + +       L     +   E +         V 
Sbjct: 134 GYADCATYLADVEQSMGLMNS-GAVYALWDYSAEFGDE-LSFREGESVTVL 182

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  146 bits (370), Expect = 2e-40
 Identities = 41/257 (15%), Positives = 74/257 (28%), Gaps = 47/257 (18%)

Query: 173 VRELVTRGADVNAEDNDNWSPLT---YAAREGYTDVCAELLDHGADLEHRDMGGWSPLMW 229
           +R ++ +            +PL     AA  G  +V  + +    D    +  G + L  
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHN 60

Query: 230 ASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVY 289
           A    +   V  L+   A+VN+  ++  + L  AA    T I   LV+ GA +       
Sbjct: 61  AICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSD 120

Query: 290 GTTPLVWA--CRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTV 347
           G T        R+G+ +    L     ++ +    A   L+  +                
Sbjct: 121 GATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSA--------------- 165

Query: 348 GLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKG 407
                          +  +E+   E + V            ++       T   WA   G
Sbjct: 166 ---------------EFGDELSFREGESVT-----------VLRRDGPEETDWWWAALHG 199

Query: 408 HVEIVDI-LLKAGANVD 423
               V          V 
Sbjct: 200 QEGYVPRNYFGLFPRVK 216

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  144 bits (365), Expect = 1e-39
 Identities = 39/171 (22%), Positives = 63/171 (36%), Gaps = 6/171 (3%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
              ++ G TAL  A      S V  L+T GA+VN+ D+  W+PL  AA    T +C  L+
Sbjct: 48  SQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALV 107

Query: 211 DHGADLEHRDM-GGWSPLMWAS--YKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRG 267
            HGA +    +  G +         +G+ D    L D    +    +  + +L   +   
Sbjct: 108 QHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYS-AE 166

Query: 268 YTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDI-LLKAGANVD 317
           + + ++    +   V   D     T   WA   G    V          V 
Sbjct: 167 FGDELSFREGESVTVLRRDG-PEETDWWWAALHGQEGYVPRNYFGLFPRVK 216

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  135 bits (343), Expect = 1e-36
 Identities = 33/178 (18%), Positives = 54/178 (30%), Gaps = 4/178 (2%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
               L+ A   G +E+V   +K   +         T L  A  G    +V+ L+    NV
Sbjct: 21  PLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRS-GDSNLIHA--VKGGHRGIVE 512
           N+ D  G T L  A       I + L+  GA I     S G +        + G+     
Sbjct: 81  NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCAT 140

Query: 513 ALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVK 570
            L      + +       A++          L      +  +       +T    A  
Sbjct: 141 YLADVEQSMGLMNSGAVYALWDY-SAEFGDELSFREGESVTVLRRDGPEETDWWWAAL 197

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  133 bits (338), Expect = 6e-36
 Identities = 41/236 (17%), Positives = 75/236 (31%), Gaps = 13/236 (5%)

Query: 412 VDILLKAGANV---DVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTI 468
           +  +L+   +      A L     LL A L    EVV+  ++   + +  +++G TAL  
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHN 60

Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIP-GKE 527
           A     Y I   L+ +GA +N  D  G + L  A       I  AL++    +      +
Sbjct: 61  AICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSD 120

Query: 528 RKTAVYTA--VEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKA 585
             TA        +G       L      + +        L         + +     +  
Sbjct: 121 GATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSA-EFGDELSFREGESV 179

Query: 586 KITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQ 641
            +   D   +T    A     +  V      P+N   L+   K   +      ++ 
Sbjct: 180 TVLRRDGPEETDWWWAALHGQEGYV------PRNYFGLFPRVKPQRSKVKHHHHHH 229

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  123 bits (312), Expect = 2e-32
 Identities = 42/269 (15%), Positives = 71/269 (26%), Gaps = 47/269 (17%)

Query: 239 VALLLDKNADVNAHGNYHIS---SLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLV 295
           +  +L K           ++    L+ AA  G  E+V   VK+    +  ++  G T L 
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNE-EGITALH 59

Query: 296 WACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGS 355
            A    +  IVD L+ AGANV+      + PL+ +                    A    
Sbjct: 60  NAICGANYSIVDFLITAGANVNSPDSHGWTPLHCA--------------------ASCND 99

Query: 356 GKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWA--CRKGHVEIVD 413
                            + G            +    LS G T        R+G+ +   
Sbjct: 100 ---------TVICMALVQHGAA----------IFATTLSDGATAFEKCDPYREGYADCAT 140

Query: 414 ILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDG 473
            L     ++ +        L   +     + +         V   D    T    A   G
Sbjct: 141 YLADVEQSMGLMNSGAVYALWDYSAEF-GDELSFREGESVTVLRRDGPEETDWWWAALHG 199

Query: 474 YYEI-AVLLLNSGAYINIQDRSGDSNLIH 501
                          +  Q      +  H
Sbjct: 200 QEGYVPRNYFGLFPRVKPQRSKVKHHHHH 228

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  118 bits (298), Expect = 2e-30
 Identities = 39/163 (23%), Positives = 59/163 (36%), Gaps = 7/163 (4%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            G T L  A    +  IVD L+ AGANV+    + WTPL  A   N T +   L+++   
Sbjct: 53  EGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAA 112

Query: 455 VNALD-KDGCTALTIA--CKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIV 511
           + A    DG TA       ++GY + A  L +    + + +      L           +
Sbjct: 113 IFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGD-EL 171

Query: 512 EALLKKYVDVDIPGKERKTAVYTAVEKGN---VPILKLLLTAN 551
                + V V       +T  + A   G    VP     L   
Sbjct: 172 SFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFPR 214

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  105 bits (265), Expect = 4e-26
 Identities = 46/270 (17%), Positives = 71/270 (26%), Gaps = 85/270 (31%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
           +   +    L+ A   G   +V+  +K+  D                             
Sbjct: 16  RARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQ-------------------------- 49

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLLT--ANPDLEIATKTLPRSDSMVSLCYRT 126
              N+     E  TA++ A+   N  I+  L+T  AN +                     
Sbjct: 50  --PNE-----EGITALHNAICGANYSIVDFLITAGANVN--------------------- 81

Query: 127 LQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAE 186
                                      D +G T L  AA          LV  GA + A 
Sbjct: 82  -------------------------SPDSHGWTPLHCAASCNDTVICMALVQHGAAIFAT 116

Query: 187 D-NDNWSPLTYAA--REGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLL 243
             +D  +        REGY D    L D    +   + G    L   S     D ++   
Sbjct: 117 TLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYS-AEFGDELSFRE 175

Query: 244 DKNADVNAHGNYHISSLIWAAGRGYTEIVA 273
            ++  V        +   WAA  G    V 
Sbjct: 176 GESVTVLRRDGPEETDWWWAALHGQEGYVP 205

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 90.8 bits (226), Expect = 8e-21
 Identities = 23/141 (16%), Positives = 45/141 (31%), Gaps = 5/141 (3%)

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGL-YCWTPLLVA--TLGNFTEVVELLLE 450
           S+G TPL  A       I   L++ GA +    L    T           + +    L +
Sbjct: 85  SHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLAD 144

Query: 451 YKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGI 510
            + ++  ++     AL     +   E++         +  +D   +++   A   G  G 
Sbjct: 145 VEQSMGLMNSGAVYALWDYSAEFGDELS-FREGESVTVLRRDGPEETDWWWAALHGQEGY 203

Query: 511 VEA-LLKKYVDVDIPGKERKT 530
           V       +  V     + K 
Sbjct: 204 VPRNYFGLFPRVKPQRSKVKH 224

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 49.6 bits (119), Expect = 8e-07
 Identities = 31/195 (15%), Positives = 57/195 (29%), Gaps = 29/195 (14%)

Query: 5   DVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSD---ALNVTDANDQ 61
           D S   +  G + L +A+ G +  IV+ L+    +V+        S     L+   + + 
Sbjct: 46  DPSQP-NEEGITALHNAICGANYSIVDFLITAGANVN-----SPDSHGWTPLHCAASCND 99

Query: 62  RSTTRNLL----DKNKHKSLKERKTAVYTA--VEKGNVPILKLLLTANPDLEIATKTLPR 115
                 L+          +L +  TA        +G       L      + +       
Sbjct: 100 TVICMALVQHGAAIFA-TTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGA-- 156

Query: 116 SDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFV-R 174
                           + +  D L  F E +      RD    T   +AA  G+  +V R
Sbjct: 157 ---------VYALWDYSAEFGDELS-FREGESVTVLRRDGPEETDWWWAALHGQEGYVPR 206

Query: 175 ELVTRGADVNAEDND 189
                   V  + + 
Sbjct: 207 NYFGLFPRVKPQRSK 221

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  146 bits (371), Expect = 1e-41
 Identities = 55/125 (44%), Positives = 75/125 (60%)

Query: 156 NGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGAD 215
           NG T L  AA+ G L  V+ L+  GADVNA+D +  +PL  AAR G+ +V   LL+ GAD
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
           +  +D  G +PL  A+  GH + V LLL+  ADVNA      + L  AA  G+ E+V LL
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 120

Query: 276 VKKGA 280
           ++ GA
Sbjct: 121 LEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  145 bits (369), Expect = 2e-41
 Identities = 57/126 (45%), Positives = 77/126 (61%), Gaps = 1/126 (0%)

Query: 189 DNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNAD 248
           +  +PL  AAR G+ +V   LL+ GAD+  +D  G +PL  A+  GH + V LLL+  AD
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 249 VNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDI 308
           VNA      + L  AA  G+ E+V LL++ GA VN  DK  G TPL  A R GH+E+V +
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNGHLEVVKL 119

Query: 309 LLKAGA 314
           LL+AGA
Sbjct: 120 LLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  130 bits (330), Expect = 6e-36
 Identities = 53/122 (43%), Positives = 78/122 (63%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL  A R GH+E+V +LL+AGA+V+       TPL +A      EVV+LLLE   +V
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           NA DK+G T L +A ++G+ E+  LLL +GA +N +D++G + L  A + GH  +V+ LL
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121

Query: 516 KK 517
           + 
Sbjct: 122 EA 123

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  121 bits (307), Expect = 8e-33
 Identities = 48/109 (44%), Positives = 65/109 (59%), Gaps = 1/109 (0%)

Query: 223 GWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKV 282
           G +PL  A+  GH + V LLL+  ADVNA      + L  AA  G+ E+V LL++ GA V
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61

Query: 283 NVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSA 331
           N  DK  G TPL  A R GH+E+V +LL+AGA+V+        PL+ +A
Sbjct: 62  NAKDK-NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAA 109

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  115 bits (290), Expect = 1e-30
 Identities = 42/97 (43%), Positives = 59/97 (60%)

Query: 151 DDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
           + +D NG T L  AA+ G L  V+ L+  GADVNA+D +  +PL  AAR G+ +V   LL
Sbjct: 29  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 88

Query: 211 DHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNA 247
           + GAD+  +D  G +PL  A+  GH + V LLL+  A
Sbjct: 89  EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  109 bits (275), Expect = 2e-28
 Identities = 44/93 (47%), Positives = 60/93 (64%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            G TPL  A R GH+E+V +LL+AGA+V+       TPL +A      EVV+LLLE   +
Sbjct: 34  NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 93

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAY 487
           VNA DK+G T L +A ++G+ E+  LLL +GAY
Sbjct: 94  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  107 bits (271), Expect = 6e-28
 Identities = 47/119 (39%), Positives = 74/119 (62%)

Query: 430 WTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYIN 489
            TPL +A      EVV+LLLE   +VNA DK+G T L +A ++G+ E+  LLL +GA +N
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 62

Query: 490 IQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLL 548
            +D++G + L  A + GH  +V+ LL+   DV+   K  +T ++ A   G++ ++KLLL
Sbjct: 63  AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  102 bits (256), Expect = 6e-26
 Identities = 43/125 (34%), Positives = 76/125 (60%)

Query: 461 DGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVD 520
           +G T L +A ++G+ E+  LLL +GA +N +D++G + L  A + GH  +V+ LL+   D
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 521 VDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQML 580
           V+   K  +T ++ A   G++ ++KLLL A  D+    K+G TPL  A +  +LE +++L
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 120

Query: 581 IDKKA 585
           ++  A
Sbjct: 121 LEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 77.8 bits (193), Expect = 2e-17
 Identities = 50/197 (25%), Positives = 71/197 (36%), Gaps = 77/197 (39%)

Query: 18  LIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSL 77
           L  A + GH  +V+ LL+   DV             N  D                    
Sbjct: 6   LHLAARNGHLEVVKLLLEAGADV-------------NAKD-------------------- 32

Query: 78  KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLD 137
           K  +T ++ A   G++ ++KLLL A  D+                               
Sbjct: 33  KNGRTPLHLAARNGHLEVVKLLLEAGADVNAK---------------------------- 64

Query: 138 SLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYA 197
                           D NG T L  AA+ G L  V+ L+  GADVNA+D +  +PL  A
Sbjct: 65  ----------------DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLA 108

Query: 198 AREGYTDVCAELLDHGA 214
           AR G+ +V   LL+ GA
Sbjct: 109 ARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 67.8 bits (167), Expect = 7e-14
 Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 13/110 (11%)

Query: 529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT 588
           +T ++ A   G++ ++KLLL A  D+    K+G TPL  A +  +LE +++L++  A + 
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 62

Query: 589 AVDKRGDTVLHIAMRARSKTIVEVFIR-----NPKNNILLYRPNKAGETP 633
           A DK G T LH+A R     +V++ +      N K+          G TP
Sbjct: 63  AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN--------GRTP 104

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 49.3 bits (119), Expect = 2e-07
 Identities = 19/55 (34%), Positives = 33/55 (60%)

Query: 560 DGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI 614
           +G TPL  A +  +LE +++L++  A + A DK G T LH+A R     +V++ +
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 55

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  148 bits (375), Expect = 1e-41
 Identities = 28/179 (15%), Positives = 59/179 (32%), Gaps = 17/179 (9%)

Query: 156 NGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDN---WSPLTYAAREGYTDVCAELLDH 212
           +    +  AA  G      EL  +G +       +   +  L     E    +   L++ 
Sbjct: 5   SEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINK 64

Query: 213 GADLEHRDMGGWSPLMWASYKGHTDTVA------LLLDKNADVNAHGNYHISSLIWAAGR 266
           GAD++ R   G +        G  D         + L+K AD+ A    +   +      
Sbjct: 65  GADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFN 124

Query: 267 GYTEIV-------ALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDV 318
            + +          +  + G ++ + DK +G T L +  R      + ++       ++
Sbjct: 125 YFVDENEMIPLYKLIFSQSGLQLLIKDK-WGLTALEFVKRCQKPIALKMMEDYIKKYNL 182

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  120 bits (303), Expect = 1e-31
 Identities = 32/209 (15%), Positives = 61/209 (29%), Gaps = 41/209 (19%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGN-----FTEVVELLLE 450
               +  A   G  E    L + G   +       + +L   L N       ++   L+ 
Sbjct: 6   EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLIN 63

Query: 451 YKPNVNALDKDGCTALTIACKDGY------YEIAVLLLNSGAYINIQDRSGDSNLIHAVK 504
              ++ +  K+G T      + G        E+  + L  GA I    +     +   + 
Sbjct: 64  KGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIF 123

Query: 505 GGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLT-ANPDLEIATKDGDT 563
                  E +                           P+ KL+ + +   L I  K G T
Sbjct: 124 NYFVDENEMI---------------------------PLYKLIFSQSGLQLLIKDKWGLT 156

Query: 564 PLLKAVKTRNLEAIQMLIDKKAKITAVDK 592
            L    + +   A++M+ D   K    + 
Sbjct: 157 ALEFVKRCQKPIALKMMEDYIKKYNLKEN 185

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  109 bits (275), Expect = 6e-28
 Identities = 29/213 (13%), Positives = 58/213 (27%), Gaps = 43/213 (20%)

Query: 221 MGGWSPLMWASYKGHTDTVALLLDKNADVNAHG---NYHISSLIWAAGRGYTEIVALLVK 277
           M  +  +  A+  G  +    L +K  +        N     L         +I   L+ 
Sbjct: 4   MSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLIN 63

Query: 278 KGAKVNVGDKVYGTTPLVWACRKGH------VEIVDILLKAGANVDVAGLWAYMPLYSSA 331
           KGA +    K  GTT      + G        E+  I L+ GA++        + ++   
Sbjct: 64  KGADIKSRTK-EGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVF--- 119

Query: 332 LADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVM 391
                                        +  L + +  F + G+               
Sbjct: 120 -----------------KNIFNYFVDENEMIPLYKLI--FSQSGLQLLIK---------- 150

Query: 392 HLSYGTTPLVWACRKGHVEIVDILLKAGANVDV 424
              +G T L +  R      + ++       ++
Sbjct: 151 -DKWGLTALEFVKRCQKPIALKMMEDYIKKYNL 182

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 94.7 bits (236), Expect = 1e-22
 Identities = 28/178 (15%), Positives = 57/178 (32%), Gaps = 20/178 (11%)

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAV----KGGHRGIV 511
           NA+ +     ++ A   G YE  + L   G     +     + L   +          I 
Sbjct: 2   NAMSEY--RTVSAAAMLGTYEDFLELFEKGYEDK-ESVLKSNILYDVLRNNNDEARYKIS 58

Query: 512 EALLKKYVDVDIPGKERKTAVYTAVEKGN------VPILKLLLTANPDLEIATKDGDTPL 565
             L+ K  D+    KE  T  +   + G         + K+ L    D+    K     +
Sbjct: 59  MFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVV 118

Query: 566 LKAVKTRNLEA------IQMLIDKK-AKITAVDKRGDTVLHIAMRARSKTIVEVFIRN 616
            K +    ++        +++  +   ++   DK G T L    R +    +++    
Sbjct: 119 FKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDY 176

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 94.0 bits (234), Expect = 2e-22
 Identities = 29/221 (13%), Positives = 56/221 (25%), Gaps = 45/221 (20%)

Query: 250 NAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNV--GDKVYGTTPLVWACRKGHVEIVD 307
           NA   Y   ++  AA  G  E    L +KG +              L     +   +I  
Sbjct: 2   NAMSEY--RTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISM 59

Query: 308 ILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEE 367
            L+  GA++           +                       + G      +    E 
Sbjct: 60  FLINKGADIKSRTKEGTTLFF--------------------PLFQGGGND---ITGTTEL 96

Query: 368 MKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVD-------ILLKAGA 420
            K F  +G D T                    +        V+  +       I  ++G 
Sbjct: 97  CKIFLEKGADITAL-----------YKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGL 145

Query: 421 NVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKD 461
            + +   +  T L           ++++ +Y    N  +  
Sbjct: 146 QLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKENS 186

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 94.0 bits (234), Expect = 3e-22
 Identities = 29/216 (13%), Positives = 54/216 (25%), Gaps = 50/216 (23%)

Query: 290 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGL 349
               +  A   G  E    L + G   +         +    L +   E           
Sbjct: 6   EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKI------ 57

Query: 350 YAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGH- 408
            +       FL+            +G D                  GTT      + G  
Sbjct: 58  -SM------FLI-----------NKGADIKSR-----------TKEGTTLFFPLFQGGGN 88

Query: 409 -----VEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVE-------LLLEYKPNVN 456
                 E+  I L+ GA++          +       F +  E       +  +    + 
Sbjct: 89  DITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLL 148

Query: 457 ALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
             DK G TAL    +        ++ +     N+++
Sbjct: 149 IKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 81.3 bits (201), Expect = 6e-18
 Identities = 26/157 (16%), Positives = 49/157 (31%), Gaps = 19/157 (12%)

Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERK---TAVYTAVEKGNVPILKLLLT 549
            S    +  A   G       L +K  +      +       +    ++    I   L+ 
Sbjct: 4   MSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLIN 63

Query: 550 ANPDLEIATKDGDTPLLKAVK------TRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMR 603
              D++  TK+G T      +      T   E  ++ ++K A ITA+ K    V+   + 
Sbjct: 64  KGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIF 123

Query: 604 ARSKTIVEVFIRNPKNNILLYRP-------NKAGETP 633
                  E     P   ++  +        +K G T 
Sbjct: 124 NYFVDENE---MIPLYKLIFSQSGLQLLIKDKWGLTA 157

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 80.1 bits (198), Expect = 1e-17
 Identities = 23/225 (10%), Positives = 48/225 (21%), Gaps = 60/225 (26%)

Query: 12  RSGDSNLIHAVKGGHRGIVEALLKKYVDV-DIPGKVRKLSDALNVTDANDQRSTTRNLLD 70
            S    +  A   G       L +K  +  +   K   L D L   +   +   +  L++
Sbjct: 4   MSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLIN 63

Query: 71  K--NKHKSLKERKTAVYTAVEKGN------VPILKLLLTANPDLEIATKTLPRSDSMVSL 122
           K  +     KE  T  +   + G         + K+ L    D+                
Sbjct: 64  KGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITA-------------- 109

Query: 123 CYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRE------- 175
                                                 +        +            
Sbjct: 110 ------------------------------LYKPYKIVVFKNIFNYFVDENEMIPLYKLI 139

Query: 176 LVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRD 220
               G  +  +D    + L +  R         + D+      ++
Sbjct: 140 FSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  152 bits (386), Expect = 4e-41
 Identities = 47/390 (12%), Positives = 96/390 (24%), Gaps = 56/390 (14%)

Query: 116 SDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQ-KGKLSFVR 174
            +           S +     +++  FL       +         L +A   +       
Sbjct: 27  ENLFQHFISANELSLMTLSYKEAIHIFLPGT---KNMEQVRQLLCLYYAHYNRNAKQLWS 83

Query: 175 ELVTRGADVNAEDNDNWSPLTYAAREGYT---DVCAELLDHGADLEHRDMGGWSPLMWAS 231
           +   +G                AA  G +   D    LL     ++      +     A+
Sbjct: 84  DAHKKGIKSEV-------ICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAA 136

Query: 232 YKGHTDTVALLLDKNADVNA--HGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGD-KV 288
             GH   +  L +             +  +   AA  G+  ++  L +          + 
Sbjct: 137 ENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQA 196

Query: 289 YGTTPLVWAC-RKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTV 347
                  WA   +GH  +++ LL     +  A +  +                       
Sbjct: 197 ENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYV---------------- 240

Query: 348 GLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKG 407
                + +     L ++ +  K     GV           V       G   L    R+ 
Sbjct: 241 ---NPFIARHVNRLKEMHDAFKLSNPDGV--------FDLVTKSECLQGFYMLRNLIRRN 289

Query: 408 HVEIVDIL--------LKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD 459
              ++D +        +KA A            L +A          LLL     +    
Sbjct: 290 DEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLALTK 349

Query: 460 KDGCTALTIACKDGYYEIAVLLLNSGAYIN 489
            +      I    G  ++  + L    + +
Sbjct: 350 ANN---YYINETGGRLDLRAVALEHHHHHH 376

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  143 bits (362), Expect = 8e-38
 Identities = 51/400 (12%), Positives = 107/400 (26%), Gaps = 47/400 (11%)

Query: 64  TTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLC 123
           T  N+ +      L+     ++  + +  +   +L L      E     LP + +     
Sbjct: 5   TIHNIENYENDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKN----- 59

Query: 124 YRTLQSYIAEDNLDSLQTFLENKRTVAD--DRDDNGGTALMFAAQKGK---LSFVRELVT 178
              ++  +    L         K+  +D   +          AA  G    L  +  L+T
Sbjct: 60  MEQVRQLLC---LYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLT 116

Query: 179 RGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDM--GGWSPLMWASYKGHT 236
               V     +N+     AA  G+  V   L +         +    +     A+  GH 
Sbjct: 117 SDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHL 176

Query: 237 DTVALLLDKNA-----DVNAHGNYHISSLIWAA-GRGYTEIVALLVKKGAKVNVGDKVYG 290
             +  L +         + A   Y   +  WAA GRG+  ++  L+     +   +    
Sbjct: 177 HVLNRLCELAPTEATAMIQAENYY---AFRWAAVGRGHHNVINFLLDCPVMLAYAEI--- 230

Query: 291 TTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLY 350
                     G   +    +    N       A+       + D+ ++        +   
Sbjct: 231 -----HEFEYGEKYVNP-FIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRN 284

Query: 351 AKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVE 410
               + +  L            +                          L  A R G+  
Sbjct: 285 LIRRNDEVLLDDIRFLLSIPGIKALAPTATI-----------PGDANELLRLALRLGNQG 333

Query: 411 IVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLE 450
              +LL   + + +          +   G   ++  + LE
Sbjct: 334 ACALLLSIPSVLALTKA---NNYYINETGGRLDLRAVALE 370

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  138 bits (348), Expect = 7e-36
 Identities = 46/359 (12%), Positives = 97/359 (27%), Gaps = 51/359 (14%)

Query: 172 FVRELVTRGADVNAEDNDNWSPLTYAARE-GYTDVCAELLDHGADLEHRDMGGWSPLMWA 230
            +   +    ++  E       L YA        + ++    G      ++  +   +  
Sbjct: 49  AIHIFLPGTKNM--EQVRQLLCLYYAHYNRNAKQLWSDAHKKGIK---SEVICFVAAITG 103

Query: 231 SYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDK-VY 289
                 DT+ LLL  +  V      +  +   AA  G+  ++  L +      +      
Sbjct: 104 C-SSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAE 162

Query: 290 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGL 349
                  A   GH+ +++ L +       A               I +E           
Sbjct: 163 NYHAFRLAAENGHLHVLNRLCELAPTEATA--------------MIQAENY--YAF---R 203

Query: 350 YAKWGSG----KSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACR 405
           +A  G G     +FLL            +        +  +   V  L         +  
Sbjct: 204 WAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNP 263

Query: 406 KGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELL--------LEYKPNVNA 457
            G  ++V              L  +  L      N   +++ +        ++       
Sbjct: 264 DGVFDLVT---------KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTAT 314

Query: 458 LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLK 516
           +  D    L +A + G      LLL+  + + +      +N      GG   +    L+
Sbjct: 315 IPGDANELLRLALRLGNQGACALLLSIPSVLALTK---ANNYYINETGGRLDLRAVALE 370

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  117 bits (294), Expect = 1e-28
 Identities = 36/254 (14%), Positives = 76/254 (29%), Gaps = 32/254 (12%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYC--WTPLLVATLGNFTEVVELLLEYK 452
                   A   GH+ +++ L +      +A +    +    +A       V+  L E  
Sbjct: 127 ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELA 186

Query: 453 PNVNA--LDKDGCTALTIAC-KDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRG 509
           P      +  +   A   A    G++ +   LL+    +   +        H  + G + 
Sbjct: 187 PTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEI-------HEFEYGEKY 239

Query: 510 IVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPIL-----KLLLTANPDLEIATKDGDTP 564
           +   + +    +    KE   A   +   G   ++              L    +  D  
Sbjct: 240 VNPFIARHVNRL----KEMHDAFKLSNPDGVFDLVTKSECLQGFYM---LRNLIRRNDEV 292

Query: 565 LLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNIL-- 622
           LL  ++   L +I   I   A    +    + +L +A+R  ++    + +  P    L  
Sbjct: 293 LLDDIR--FLLSIP-GIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLALTK 349

Query: 623 ---LYRPNKAGETP 633
               Y     G   
Sbjct: 350 ANNYYINETGGRLD 363

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  113 bits (283), Expect = 3e-27
 Identities = 50/340 (14%), Positives = 99/340 (29%), Gaps = 63/340 (18%)

Query: 16  SNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHK 75
           +N +  +   ++  +   L    +++   +VR+L             +     L  + HK
Sbjct: 36  ANELSLMTLSYKEAIHIFLPGTKNME---QVRQLLCL-----YYAHYNRNAKQLWSDAHK 87

Query: 76  SLKERKTAVYTAVEKGN---VPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIA 132
              + +   + A   G    +  L LLLT++  +++        ++  +         +A
Sbjct: 88  KGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQA-----ENYQAF-------RLA 135

Query: 133 EDN--LDSLQTFLENKRTV-ADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAED-- 187
            +N  L  L    E   T            A   AA+ G L  +  L             
Sbjct: 136 AENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQ 195

Query: 188 -NDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMG----------------------GW 224
             + ++    A   G+ +V   LLD    L + ++                         
Sbjct: 196 AENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH 255

Query: 225 SPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL-----VKKG 279
                ++  G  D V             G Y + +LI        + +  L     +K  
Sbjct: 256 DAFKLSNPDGVFDLV------TKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKAL 309

Query: 280 AKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVA 319
           A             L  A R G+     +LL   + + + 
Sbjct: 310 APTATIPG-DANELLRLALRLGNQGACALLLSIPSVLALT 348

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  106 bits (265), Expect = 7e-25
 Identities = 37/398 (9%), Positives = 93/398 (23%), Gaps = 84/398 (21%)

Query: 233 KGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTT 292
             + + + + L    ++       +  L+      Y      L     K  +  +V    
Sbjct: 44  LSYKEAIHIFLPGTKNME-----QVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFV 98

Query: 293 PLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSAL---ADIFSEPGLATPLTVGL 349
             +  C    ++ + +LL +   V V     Y     +A      +              
Sbjct: 99  AAITGC-SSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHV-------------- 143

Query: 350 YAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHV 409
                     L                           ++ M  +        A   GH+
Sbjct: 144 -LNR------LC-----------ELAPTE---------IMAMIQAENYHAFRLAAENGHL 176

Query: 410 EIVDILLKAGANV---DVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTAL 466
            +++ L +         +     +     A       V+  LL+    +         A 
Sbjct: 177 HVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAY-------AE 229

Query: 467 TIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGK 526
               + G   +   +      +             +   G   +V               
Sbjct: 230 IHEFEYGEKYVNPFIARHVNRLK----EMHDAFKLSNPDGVFDLVTKS---------ECL 276

Query: 527 ERKTAVYTAVEKGNVPILKLL--------LTANPDLEIATKDGDTPLLKAVKTRNLEAIQ 578
           +    +   + + +  +L  +        + A         D +  L  A++  N  A  
Sbjct: 277 QGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACA 336

Query: 579 MLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN 616
           +L+   + +           +I        +  V + +
Sbjct: 337 LLLSIPSVLALTKANN---YYINETGGRLDLRAVALEH 371

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 92.7 bits (230), Expect = 2e-20
 Identities = 33/257 (12%), Positives = 67/257 (26%), Gaps = 18/257 (7%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
                       A + GH  ++  L +      +     +   A  +   N        L
Sbjct: 123 VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRL 182

Query: 69  LDKNKHKSLKERK-----TAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLC 123
            +    ++    +        + AV +G+  ++  LL     L  A              
Sbjct: 183 CELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNP 242

Query: 124 YRTLQSYIAEDNLDSLQTFLENKRT--VADDRDDNGGTALMFAAQKGKLSFVREL----- 176
           +        ++  D+ +    +     V       G   L    ++     + ++     
Sbjct: 243 FIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLS 302

Query: 177 ---VTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYK 233
              +   A       D    L  A R G    CA LL   + L       +         
Sbjct: 303 IPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLALTKANNY---YINETG 359

Query: 234 GHTDTVALLLDKNADVN 250
           G  D  A+ L+ +   +
Sbjct: 360 GRLDLRAVALEHHHHHH 376

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 85.0 bits (210), Expect = 6e-18
 Identities = 32/224 (14%), Positives = 61/224 (27%), Gaps = 11/224 (4%)

Query: 383 SSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFT 442
             +L+  +         L       + E + I L    N++         LL     ++ 
Sbjct: 22  PWILWENLFQHFISANELSLM-TLSYKEAIHIFLPGTKNMEQV-----RQLLCLYYAHYN 75

Query: 443 EVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHA 502
              + L           +  C    I       +   LLL S   + +           A
Sbjct: 76  RNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLA 135

Query: 503 VKGGHRGIVEALLKKYVDVDIPGKERK--TAVYTAVEKGNVPILKLLLTANPDLEIATKD 560
            + GH  ++  L +      +   + +   A   A E G++ +L  L    P    A   
Sbjct: 136 AENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQ 195

Query: 561 GD---TPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIA 601
            +        AV   +   I  L+D    +   +          
Sbjct: 196 AENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKY 239

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  143 bits (363), Expect = 1e-40
 Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 1/122 (0%)

Query: 185 AEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLD 244
              +       +A + G  D   + +  G D+     GG  PL +A+  G  + +  LL 
Sbjct: 2   PLGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLL 61

Query: 245 KNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVE 304
           K AD+NA   +HI+ L+ A   G+   V LL+ KGA   V     G T       +    
Sbjct: 62  KGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGP-DGLTAFEATDNQAIKA 120

Query: 305 IV 306
           ++
Sbjct: 121 LL 122

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  139 bits (354), Expect = 2e-39
 Identities = 36/117 (30%), Positives = 53/117 (45%)

Query: 156 NGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGAD 215
                 M+A + G L  V++ V +G DVN        PL YAA  G  ++   LL  GAD
Sbjct: 6   MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD 65

Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIV 272
           +   D    +PL+ A Y+GH   V LLL K AD    G   +++      +    ++
Sbjct: 66  INAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALL 122

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  126 bits (319), Expect = 1e-34
 Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 1/109 (0%)

Query: 223 GWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKV 282
                MWA   G  D V   + K  DVN         L +AA  G  EI+  L+ KGA +
Sbjct: 7   CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI 66

Query: 283 NVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSA 331
           N  DK +  TPL+ A  +GHV  V +LL  GA+  V G        ++ 
Sbjct: 67  NAPDK-HHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATD 114

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  124 bits (313), Expect = 9e-34
 Identities = 28/119 (23%), Positives = 49/119 (41%)

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKP 453
           S      +WA + G ++ V   +  G +V+        PL  A      E++E LL    
Sbjct: 5   SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGA 64

Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVE 512
           ++NA DK   T L  A  +G+     LLL+ GA   ++   G +          + +++
Sbjct: 65  DINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  105 bits (266), Expect = 2e-27
 Identities = 32/118 (27%), Positives = 47/118 (39%)

Query: 428 YCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAY 487
            C    + A      + V+  +    +VN   + G   L  A   G  EI   LL  GA 
Sbjct: 6   MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD 65

Query: 488 INIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILK 545
           IN  D+   + L+ AV  GH   V+ LL K  D  + G +  TA      +    +L+
Sbjct: 66  INAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  105 bits (265), Expect = 3e-27
 Identities = 24/87 (27%), Positives = 38/87 (43%)

Query: 153 RDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDH 212
             + G   L +AA  G+L  +  L+ +GAD+NA D  + +PL  A  EG+      LL  
Sbjct: 36  TLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSK 95

Query: 213 GADLEHRDMGGWSPLMWASYKGHTDTV 239
           GAD   +   G +       +     +
Sbjct: 96  GADKTVKGPDGLTAFEATDNQAIKALL 122

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 90.5 bits (226), Expect = 7e-22
 Identities = 30/155 (19%), Positives = 46/155 (29%), Gaps = 33/155 (21%)

Query: 457 ALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLK 516
            L          A K+G  +     +  G  +N     G   L +A   G   I+E LL 
Sbjct: 2   PLGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLL 61

Query: 517 KYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEA 576
           K  D+                                     K   TPLL AV   ++  
Sbjct: 62  KGADI---------------------------------NAPDKHHITPLLSAVYEGHVSC 88

Query: 577 IQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVE 611
           +++L+ K A  T     G T          K +++
Sbjct: 89  VKLLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 83.2 bits (207), Expect = 3e-19
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 4/83 (4%)

Query: 249 VNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDI 308
           + +  +      +WA   G  + V   V KG  VN   +  G  PL +A   G +EI++ 
Sbjct: 3   LGSMCD---KEFMWALKNGDLDEVKDYVAKGEDVNRTLE-GGRKPLHYAADCGQLEILEF 58

Query: 309 LLKAGANVDVAGLWAYMPLYSSA 331
           LL  GA+++        PL S+ 
Sbjct: 59  LLLKGADINAPDKHHITPLLSAV 81

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 70.9 bits (175), Expect = 5e-15
 Identities = 29/192 (15%), Positives = 53/192 (27%), Gaps = 77/192 (40%)

Query: 14  GDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNK 73
            D   + A+K G    V+  + K  DV             N T                 
Sbjct: 7   CDKEFMWALKNGDLDEVKDYVAKGEDV-------------NRTL---------------- 37

Query: 74  HKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAE 133
               +  +  ++ A + G + IL+ LL    D+                           
Sbjct: 38  ----EGGRKPLHYAADCGQLEILEFLLLKGADINA------------------------- 68

Query: 134 DNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSP 193
                               D +  T L+ A  +G +S V+ L+++GAD   +  D  + 
Sbjct: 69  -------------------PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTA 109

Query: 194 LTYAAREGYTDV 205
                 +    +
Sbjct: 110 FEATDNQAIKAL 121

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 64.0 bits (157), Expect = 2e-12
 Identities = 21/87 (24%), Positives = 37/87 (42%)

Query: 530 TAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITA 589
                A++ G++  +K  +    D+    + G  PL  A     LE ++ L+ K A I A
Sbjct: 9   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 68

Query: 590 VDKRGDTVLHIAMRARSKTIVEVFIRN 616
            DK   T L  A+     + V++ +  
Sbjct: 69  PDKHHITPLLSAVYEGHVSCVKLLLSK 95

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 48.9 bits (118), Expect = 2e-07
 Identities = 11/58 (18%), Positives = 22/58 (37%)

Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN 616
              D   + A+K  +L+ ++  + K   +    + G   LH A       I+E  +  
Sbjct: 5   SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLK 62

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score =  141 bits (357), Expect = 2e-38
 Identities = 38/184 (20%), Positives = 65/184 (35%), Gaps = 24/184 (13%)

Query: 157 GGTALMFAAQKGKLSFVRE-LVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGAD 215
             + L+ AA++  +  + + L   G +V+       + L  AA     +    L++   +
Sbjct: 3   WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPE 62

Query: 216 LEH-----RDMGGWSPLMWASYKGHTDTVALLLDKNADVNA-------------HGNYHI 257
           L           G + L  A    + + V  LL + A V+A                Y  
Sbjct: 63  LVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGE 122

Query: 258 SSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIV----DILLKAG 313
             L +AA  G  EIV LL++ GA +   D   G T L     + +        ++LL   
Sbjct: 123 HPLSFAACVGSEEIVRLLIEHGADIRAQDS-LGNTVLHILILQPNKTFACQMYNLLLSYD 181

Query: 314 ANVD 317
               
Sbjct: 182 GGDH 185

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score =  117 bits (295), Expect = 6e-30
 Identities = 39/213 (18%), Positives = 73/213 (34%), Gaps = 29/213 (13%)

Query: 431 TPLLVATL-GNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYI- 488
           +PLL+A    +   + +LL      V+     G TAL IA      E A++L+ +   + 
Sbjct: 5   SPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELV 64

Query: 489 ----NIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDI-------------PGKERKTA 531
                 +   G + L  AV   +  +V ALL +   V                    +  
Sbjct: 65  FEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHP 124

Query: 532 VYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLE----AIQMLIDKKAKI 587
           +  A   G+  I++LL+    D+      G+T L   +   N         +L+      
Sbjct: 125 LSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGD 184

Query: 588 ------TAVDKRGDTVLHIAMRARSKTIVEVFI 614
                    + +G T   +A    +  + +  +
Sbjct: 185 HLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLM 217

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score =  116 bits (293), Expect = 9e-30
 Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 18/159 (11%)

Query: 192 SPLTYAAREGYTDVCAELL-DHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADV- 249
           SPL  AA+E      ++LL   G ++  R   G + L  A+   + +   +L++   ++ 
Sbjct: 5   SPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELV 64

Query: 250 ----NAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDK------------VYGTTP 293
                +      ++L  A       +V  L+ +GA V+                 YG  P
Sbjct: 65  FEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHP 124

Query: 294 LVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSAL 332
           L +A   G  EIV +L++ GA++          L+   L
Sbjct: 125 LSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILIL 163

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 88.4 bits (220), Expect = 5e-20
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 5/102 (4%)

Query: 221 MGGWSPLMWASYKGHTDTVA-LLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKG 279
           M   SPL+ A+ +     ++ LL  +  +V+  G    ++L  AA     E   +L++  
Sbjct: 1   MIWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAA 60

Query: 280 AKVNVGDK----VYGTTPLVWACRKGHVEIVDILLKAGANVD 317
            ++           G T L  A    +V +V  LL  GA+V 
Sbjct: 61  PELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVS 102

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  137 bits (348), Expect = 2e-38
 Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 2/134 (1%)

Query: 179 RGADVNAED-NDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTD 237
           RG+  +    +D    L  AAR G  D    L+ +GAD+  +D  G +PL  A+  GH +
Sbjct: 2   RGSHHHHHHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLE 61

Query: 238 TVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWA 297
            V +LL   ADVNA      + L  AA  G+ EI  +L+K GA VN  DK +G T    +
Sbjct: 62  IVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDK-FGKTAFDIS 120

Query: 298 CRKGHVEIVDILLK 311
              G+ ++ +IL K
Sbjct: 121 IGNGNEDLAEILQK 134

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  127 bits (323), Expect = 6e-35
 Identities = 42/122 (34%), Positives = 67/122 (54%)

Query: 156 NGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGAD 215
           + G  L+ AA+ G+   VR L+  GADVNA+D    +PL  A   G+ ++   LL +GAD
Sbjct: 13  DLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD 72

Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
           +   D  G++PL  A++ GH +   +LL   ADVNA   +  ++   + G G  ++  +L
Sbjct: 73  VNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEIL 132

Query: 276 VK 277
            K
Sbjct: 133 QK 134

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  122 bits (310), Expect = 4e-33
 Identities = 47/129 (36%), Positives = 68/129 (52%)

Query: 388 VLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVEL 447
               H S     L+ A R G  + V IL+  GA+V+    Y  TPL +AT     E+VE+
Sbjct: 6   HHHHHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEV 65

Query: 448 LLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGH 507
           LL+   +VNA+D  G T L +A   G+ EIA +LL  GA +N QD+ G +    ++  G+
Sbjct: 66  LLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGN 125

Query: 508 RGIVEALLK 516
             + E L K
Sbjct: 126 EDLAEILQK 134

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  112 bits (282), Expect = 3e-29
 Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 7/136 (5%)

Query: 413 DILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKD 472
                 G+++          LL A      + V +L+    +VNA D+ G T L +A   
Sbjct: 5   HHHHHHGSDL-------GKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAH 57

Query: 473 GYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAV 532
           G+ EI  +LL +GA +N  D  G + L  A   GH  I E LLK   DV+   K  KTA 
Sbjct: 58  GHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAF 117

Query: 533 YTAVEKGNVPILKLLL 548
             ++  GN  + ++L 
Sbjct: 118 DISIGNGNEDLAEILQ 133

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  111 bits (280), Expect = 5e-29
 Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 8/109 (7%)

Query: 209 LLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGY 268
              HG+D           L+ A+  G  D V +L+   ADVNA   Y ++ L  A   G+
Sbjct: 7   HHHHGSD-------LGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGH 59

Query: 269 TEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
            EIV +L+K GA VN  D   G TPL  A   GH+EI ++LLK GA+V+
Sbjct: 60  LEIVEVLLKNGADVNAVDA-IGFTPLHLAAFIGHLEIAEVLLKHGADVN 107

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  103 bits (260), Expect = 3e-26
 Identities = 33/94 (35%), Positives = 47/94 (50%)

Query: 153 RDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDH 212
           +D+ G T L  A   G L  V  L+  GADVNA D   ++PL  AA  G+ ++   LL H
Sbjct: 43  KDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKH 102

Query: 213 GADLEHRDMGGWSPLMWASYKGHTDTVALLLDKN 246
           GAD+  +D  G +    +   G+ D   +L   N
Sbjct: 103 GADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 87.4 bits (218), Expect = 1e-20
 Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 3/132 (2%)

Query: 485 GAYINIQDRSGDSN--LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVP 542
           G++ +      D    L+ A + G    V  L+    DV+   +   T +Y A   G++ 
Sbjct: 3   GSHHHHHH-GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLE 61

Query: 543 ILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAM 602
           I+++LL    D+      G TPL  A    +LE  ++L+   A + A DK G T   I++
Sbjct: 62  IVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISI 121

Query: 603 RARSKTIVEVFI 614
              ++ + E+  
Sbjct: 122 GNGNEDLAEILQ 133

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 78.6 bits (195), Expect = 1e-17
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 2/88 (2%)

Query: 245 KNADVN-AHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHV 303
           + +  +  HG+     L+ AA  G  + V +L+  GA VN  D+ YG TPL  A   GH+
Sbjct: 2   RGSHHHHHHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDE-YGLTPLYLATAHGHL 60

Query: 304 EIVDILLKAGANVDVAGLWAYMPLYSSA 331
           EIV++LLK GA+V+      + PL+ +A
Sbjct: 61  EIVEVLLKNGADVNAVDAIGFTPLHLAA 88

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 65.9 bits (162), Expect = 4e-13
 Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 13/114 (11%)

Query: 525 GKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK 584
           G +    +  A   G    +++L+    D+    + G TPL  A    +LE +++L+   
Sbjct: 11  GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNG 70

Query: 585 AKITAVDKRGDTVLHIAMRARSKTIVEVFIR-----NPKNNILLYRPNKAGETP 633
           A + AVD  G T LH+A       I EV ++     N ++          G+T 
Sbjct: 71  ADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKF--------GKTA 116

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 65.1 bits (160), Expect = 7e-13
 Identities = 38/193 (19%), Positives = 55/193 (28%), Gaps = 78/193 (40%)

Query: 18  LIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSL 77
           L+ A + G    V  L+    DV             N  D                    
Sbjct: 18  LLEAARAGQDDEVRILMANGADV-------------NAKD-------------------- 44

Query: 78  KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLD 137
           +   T +Y A   G++ I+++LL    D+                               
Sbjct: 45  EYGLTPLYLATAHGHLEIVEVLLKNGADVNA----------------------------- 75

Query: 138 SLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYA 197
                           D  G T L  AA  G L     L+  GADVNA+D    +    +
Sbjct: 76  ---------------VDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDIS 120

Query: 198 AREGYTDVCAELL 210
              G  D+ AE+L
Sbjct: 121 IGNGNEDL-AEIL 132

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 65.1 bits (160), Expect = 7e-13
 Identities = 18/57 (31%), Positives = 30/57 (52%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEY 451
            G TPL  A   GH+EI ++LLK GA+V+    +  T   ++      ++ E+L + 
Sbjct: 79  IGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  139 bits (352), Expect = 1e-37
 Identities = 51/248 (20%), Positives = 79/248 (31%), Gaps = 54/248 (21%)

Query: 125 RTLQSYIAEDNLDSLQTFLE----NKRTVADD---RDDNGGTALMFAA---QKGKLSFVR 174
             L S ++    + L   LE    N + + D        G T LM A    Q G  + + 
Sbjct: 4   DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIM 63

Query: 175 ELVTRG-----------ADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMG- 222
            L+              A    E     S L  A  +        L+++GAD+  R  G 
Sbjct: 64  PLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGR 123

Query: 223 ------------GWSPLMWASYKGHTDTVALLLDK---NADVNAHGNY-----HISS--- 259
                       G  PL  A+     D V  LL+     A + A  +      H      
Sbjct: 124 FFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIA 183

Query: 260 --------LIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK 311
                   L+     G  ++ A L        + +   G TPL  A ++G +EI   +L+
Sbjct: 184 DNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNH-QGLTPLKLAAKEGKIEIFRHILQ 242

Query: 312 AGANVDVA 319
              +   A
Sbjct: 243 REFSGAAA 250

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  111 bits (279), Expect = 1e-27
 Identities = 38/232 (16%), Positives = 71/232 (30%), Gaps = 47/232 (20%)

Query: 394 SYGTTPLVWA---CRKGHVEIVDILLKAGANVDVAGL-----------YCWTPLLVATLG 439
           S G T L+ A    + G    +  LL+   +                    + L +A   
Sbjct: 41  STGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEK 100

Query: 440 NFTEVVELLLEYKPNVNALD-------------KDGCTALTIACKDGYYEIAVLLLNSG- 485
              + V+LL+E   +V+                  G   L++A     +++   LL +  
Sbjct: 101 RSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160

Query: 486 --AYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPI 543
             A +   D  G++ L   V                          +A+   +  G + +
Sbjct: 161 QPASLEATDSLGNTVLHALVMIAD-----------------NSPENSALVIHMYDGLLQM 203

Query: 544 LKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGD 595
              L       EI+   G TPL  A K   +E  + ++ ++    A      
Sbjct: 204 GARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGAAAHHHHH 255

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  109 bits (274), Expect = 5e-27
 Identities = 36/263 (13%), Positives = 72/263 (27%), Gaps = 55/263 (20%)

Query: 395 YGTTPLVWACRKGHVEIVDILLK--------AGANVDVAGLYCWTPLLVATL---GNFTE 443
           +    L     +G  E +  LL+           +    G    T L+ A L        
Sbjct: 1   FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNA 60

Query: 444 VVELLLEYKP-----------NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
            +  LL+                      G +AL IA +    +   LL+ +GA ++++ 
Sbjct: 61  CIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRA 120

Query: 493 RSGDSN-------------LIHAVKGGHRGIVEALLKKYV---DVDIPGKERKTAVYTAV 536
                              L  A       +V  LL+       ++       T ++  V
Sbjct: 121 CGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALV 180

Query: 537 EKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDT 596
              +                     ++ L+  +    L+    L          + +G T
Sbjct: 181 MIAD-----------------NSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLT 223

Query: 597 VLHIAMRARSKTIVEVFIRNPKN 619
            L +A +     I    ++   +
Sbjct: 224 PLKLAAKEGKIEIFRHILQREFS 246

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  103 bits (259), Expect = 5e-25
 Identities = 44/309 (14%), Positives = 73/309 (23%), Gaps = 77/309 (24%)

Query: 193 PLTYAAREGYTDVCAELLDH--------GADLEHRDMGGWSPLMWA---SYKGHTDTVAL 241
            L      G  +    LL++                  G + LM A      G    +  
Sbjct: 5   RLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMP 64

Query: 242 LLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKG 301
           LL  + D                               A+        G + L  A  K 
Sbjct: 65  LLQIDKDSGN----------------------PKPLVNAQCTDEFY-QGHSALHIAIEKR 101

Query: 302 HVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSF-L 360
            ++ V +L++ GA+V +     +           F E     PL++   A          
Sbjct: 102 SLQCVKLLVENGADVHLRACGRFFQK-HQGTCFYFGE----LPLSLA--ACTKQWDVVTY 154

Query: 361 LPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGA 420
           L +   +    E                     S G T L                    
Sbjct: 155 LLENPHQPASLEATD------------------SLGNTVLHALVMIADNS---------- 186

Query: 421 NVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVL 480
                     + L++       ++   L          +  G T L +A K+G  EI   
Sbjct: 187 -------PENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRH 239

Query: 481 LLNSGAYIN 489
           +L       
Sbjct: 240 ILQREFSGA 248

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  101 bits (253), Expect = 4e-24
 Identities = 45/284 (15%), Positives = 78/284 (27%), Gaps = 52/284 (18%)

Query: 255 YHISSLIWAAGRGYTEIVALLVKK--------GAKVNVGDKVYGTTPLVWA---CRKGHV 303
           +    L     RG  E +  L++                    G T L+ A    + G  
Sbjct: 1   FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGS-TGKTCLMKAVLNLQDGVN 59

Query: 304 EIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPK 363
             +  LL+   +              +A        G  + L +    +  S        
Sbjct: 60  ACIMPLLQIDKDSG------NPKPLVNAQCTDEFYQGH-SALHIA--IEKRS-------- 102

Query: 364 LKEEMKHFERQGVDPTFTFSSLLFVLVMHLS--YGTTPLVWACRKGHVEIVDILLKAG-- 419
             + +K     G D         F         +G  PL  A      ++V  LL+    
Sbjct: 103 -LQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ 161

Query: 420 -ANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIA 478
            A+++       T L                     + A +    +AL I   DG  ++ 
Sbjct: 162 PASLEATDSLGNTVLHALV-----------------MIADNSPENSALVIHMYDGLLQMG 204

Query: 479 VLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVD 522
             L  +     I +  G + L  A K G   I   +L++     
Sbjct: 205 ARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGA 248

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 77.5 bits (191), Expect = 4e-16
 Identities = 38/231 (16%), Positives = 70/231 (30%), Gaps = 46/231 (19%)

Query: 9   KRDRSGDSNLIHAV---KGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTT 65
               +G + L+ AV   + G    +  LL+   D   P                      
Sbjct: 38  TEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNP---------------------- 75

Query: 66  RNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCY- 124
           + L++        +  +A++ A+EK ++  +KLL+    D+ +            +  Y 
Sbjct: 76  KPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYF 135

Query: 125 -RTLQSYIAEDN-LDSLQTFLENKRTVAD------------------DRDDNGGTALMFA 164
                S  A     D +   LEN    A                     +    +AL+  
Sbjct: 136 GELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIH 195

Query: 165 AQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGAD 215
              G L     L          ++   +PL  AA+EG  ++   +L     
Sbjct: 196 MYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFS 246

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 57.5 bits (139), Expect = 2e-09
 Identities = 32/171 (18%), Positives = 56/171 (32%), Gaps = 35/171 (20%)

Query: 498 NLIHAVKGGHRGIVEALLK------KYV--DVDIPGKERKTAVYTAV---EKGNVPILKL 546
            L   V  G    +  LL+      KY+       G   KT +  AV   + G    +  
Sbjct: 5   RLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMP 64

Query: 547 LLTANPDLEIAT-----------KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVD---- 591
           LL  + D                  G + L  A++ R+L+ +++L++  A +        
Sbjct: 65  LLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRF 124

Query: 592 ---------KRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP 633
                      G+  L +A   +   +V   + NP     L   +  G T 
Sbjct: 125 FQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTV 175

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 51.3 bits (123), Expect = 3e-07
 Identities = 29/196 (14%), Positives = 55/196 (28%), Gaps = 40/196 (20%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNL 68
                G S L  A++      V+ L++   DV +                          
Sbjct: 85  DEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLR--------------------ACGRF 124

Query: 69  LDKNKHKSLKERKTAVYTAVEKGNVPILKLLL-----TANPD---------LEIATKTLP 114
             K++       +  +  A       ++  LL      A+ +         L        
Sbjct: 125 FQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIAD 184

Query: 115 RSDSMVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVR 174
            S    +L           D L  +   L     + +  +  G T L  AA++GK+   R
Sbjct: 185 NSPENSALVIH------MYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFR 238

Query: 175 ELVTRGADVNAEDNDN 190
            ++ R     A  + +
Sbjct: 239 HILQREFSGAAAHHHH 254

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  126 bits (319), Expect = 1e-34
 Identities = 41/115 (35%), Positives = 53/115 (46%), Gaps = 3/115 (2%)

Query: 180 GADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTV 239
           G        D  +PL  AA+ G+ +   +LL  GAD+  R   G +PL  A+  GH + V
Sbjct: 1   GHMWG--SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIV 58

Query: 240 ALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPL 294
            LLL K ADVNA      +    A   G+ EIV LL  KGA VN       +   
Sbjct: 59  KLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSW-GSSHHH 112

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  123 bits (311), Expect = 2e-33
 Identities = 40/106 (37%), Positives = 55/106 (51%)

Query: 150 ADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAEL 209
                 +G T L  AA+ G    V++L+++GADVNA   D  +PL  AA+ G+ ++   L
Sbjct: 2   HMWGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLL 61

Query: 210 LDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNY 255
           L  GAD+  R   G +P   A   GH + V LL  K ADVNA    
Sbjct: 62  LAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWG 107

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  120 bits (303), Expect = 2e-32
 Identities = 45/116 (38%), Positives = 58/116 (50%), Gaps = 3/116 (2%)

Query: 213 GADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIV 272
           G     +D  G +PL  A+  GH + V  LL K ADVNA      + L  AA  G+ EIV
Sbjct: 1   GHMWGSKD--GNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIV 58

Query: 273 ALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLY 328
            LL+ KGA VN   K  G TP   A + GH EIV +L   GA+V+     +    +
Sbjct: 59  KLLLAKGADVNARSK-DGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  114 bits (288), Expect = 2e-30
 Identities = 41/107 (38%), Positives = 55/107 (51%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            G TPL  A + GH E V  LL  GA+V+       TPL +A      E+V+LLL    +
Sbjct: 8   DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD 67

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIH 501
           VNA  KDG T   +A K+G++EI  LL   GA +N +      +  H
Sbjct: 68  VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHHH 114

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 97.1 bits (243), Expect = 3e-24
 Identities = 38/104 (36%), Positives = 51/104 (49%)

Query: 430 WTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYIN 489
            TPL  A      E V+ LL    +VNA  KDG T L +A K+G+ EI  LLL  GA +N
Sbjct: 10  NTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN 69

Query: 490 IQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVY 533
            + + G++    A K GH  IV+ L  K  DV+          +
Sbjct: 70  ARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 91.3 bits (228), Expect = 3e-22
 Identities = 36/107 (33%), Positives = 53/107 (49%)

Query: 459 DKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKY 518
            KDG T L  A K+G+ E    LL+ GA +N + + G++ L  A K GH  IV+ LL K 
Sbjct: 6   SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG 65

Query: 519 VDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPL 565
            DV+   K+  T  + A + G+  I+KLL     D+   +       
Sbjct: 66  ADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 88.2 bits (220), Expect = 4e-21
 Identities = 25/75 (33%), Positives = 36/75 (48%)

Query: 153 RDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDH 212
           R  +G T L  AA+ G    V+ L+ +GADVNA   D  +P   A + G+ ++   L   
Sbjct: 38  RSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAK 97

Query: 213 GADLEHRDMGGWSPL 227
           GAD+  R  G     
Sbjct: 98  GADVNARSWGSSHHH 112

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 86.7 bits (216), Expect = 1e-20
 Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 2/115 (1%)

Query: 485 GAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPIL 544
           G       + G++ L +A K GH   V+ LL K  DV+   K+  T ++ A + G+  I+
Sbjct: 1   GHMWG--SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIV 58

Query: 545 KLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLH 599
           KLLL    D+   +KDG+TP   A K  + E +++L  K A + A         H
Sbjct: 59  KLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 76.6 bits (190), Expect = 4e-17
 Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 260 LIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVA 319
           L  AA  G+ E V  L+ KGA VN   K  G TPL  A + GH EIV +LL  GA+V+  
Sbjct: 13  LHNAAKNGHAEEVKKLLSKGADVNARSK-DGNTPLHLAAKNGHAEIVKLLLAKGADVNAR 71

Query: 320 GLWAYMPLYSSA 331
                 P + + 
Sbjct: 72  SKDGNTPEHLAK 83

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 68.9 bits (170), Expect = 2e-14
 Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 7/114 (6%)

Query: 522 DIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLI 581
               K+  T ++ A + G+   +K LL+   D+   +KDG+TPL  A K  + E +++L+
Sbjct: 3   MWGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLL 62

Query: 582 DKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN--PKNNILLYRPNKAGETP 633
            K A + A  K G+T  H+A +     IV++        N       +      
Sbjct: 63  AKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVN-----ARSWGSSHH 111

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 57.0 bits (139), Expect = 3e-10
 Identities = 35/186 (18%), Positives = 55/186 (29%), Gaps = 77/186 (41%)

Query: 11  DRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLD 70
            + G++ L +A K GH   V+ LL K  DV+                             
Sbjct: 6   SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNA---------------------------- 37

Query: 71  KNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSY 130
           ++K        T ++ A + G+  I+KLLL    D+                        
Sbjct: 38  RSKD-----GNTPLHLAAKNGHAEIVKLLLAKGADVNA---------------------- 70

Query: 131 IAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDN 190
                                 R  +G T    A + G    V+ L  +GADVNA    +
Sbjct: 71  ----------------------RSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGS 108

Query: 191 WSPLTY 196
                +
Sbjct: 109 SHHHHH 114

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  117 bits (296), Expect = 8e-32
 Identities = 44/92 (47%), Positives = 57/92 (61%), Gaps = 1/92 (1%)

Query: 223 GWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKV 282
           G +PL  A+  GH + V LLL+  ADVNA      + L  AA  G+ E+V LL++ GA V
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61

Query: 283 NVGDKVYGTTPLVWACRKGHVEIVDILLKAGA 314
           N  DK  G TPL  A R GH+E+V +LL+AGA
Sbjct: 62  NAKDK-NGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  114 bits (288), Expect = 1e-30
 Identities = 41/92 (44%), Positives = 56/92 (60%)

Query: 156 NGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGAD 215
           NG T L  AA+ G L  V+ L+  GADVNA+D +  +PL  AAR G+ +V   LL+ GAD
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNA 247
           +  +D  G +PL  A+  GH + V LLL+  A
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  108 bits (273), Expect = 1e-28
 Identities = 44/92 (47%), Positives = 60/92 (65%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G TPL  A R GH+E+V +LL+AGA+V+       TPL +A      EVV+LLLE   +V
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAY 487
           NA DK+G T L +A ++G+ E+  LLL +GAY
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  107 bits (271), Expect = 2e-28
 Identities = 38/92 (41%), Positives = 54/92 (58%)

Query: 189 DNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNAD 248
           +  +PL  AAR G+ +V   LL+ GAD+  +D  G +PL  A+  GH + V LLL+  AD
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 249 VNAHGNYHISSLIWAAGRGYTEIVALLVKKGA 280
           VNA      + L  AA  G+ E+V LL++ GA
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 91.6 bits (229), Expect = 1e-22
 Identities = 37/88 (42%), Positives = 56/88 (63%)

Query: 430 WTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYIN 489
            TPL +A      EVV+LLLE   +VNA DK+G T L +A ++G+ E+  LLL +GA +N
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 62

Query: 490 IQDRSGDSNLIHAVKGGHRGIVEALLKK 517
            +D++G + L  A + GH  +V+ LL+ 
Sbjct: 63  AKDKNGRTPLHLAARNGHLEVVKLLLEA 90

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 80.9 bits (201), Expect = 7e-19
 Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 260 LIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVA 319
           L  AA  G+ E+V LL++ GA VN  DK  G TPL  A R GH+E+V +LL+AGA+V+  
Sbjct: 6   LHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNGHLEVVKLLLEAGADVNAK 64

Query: 320 GLWAYMPLYSSA 331
                 PL+ +A
Sbjct: 65  DKNGRTPLHLAA 76

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 77.0 bits (191), Expect = 2e-17
 Identities = 29/62 (46%), Positives = 39/62 (62%)

Query: 153 RDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDH 212
           +D NG T L  AA+ G L  V+ L+  GADVNA+D +  +PL  AAR G+ +V   LL+ 
Sbjct: 31  KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 90

Query: 213 GA 214
           GA
Sbjct: 91  GA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 75.1 bits (186), Expect = 7e-17
 Identities = 31/88 (35%), Positives = 55/88 (62%)

Query: 461 DGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVD 520
           +G T L +A ++G+ E+  LLL +GA +N +D++G + L  A + GH  +V+ LL+   D
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 521 VDIPGKERKTAVYTAVEKGNVPILKLLL 548
           V+   K  +T ++ A   G++ ++KLLL
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLL 88

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 68.9 bits (170), Expect = 1e-14
 Identities = 27/57 (47%), Positives = 35/57 (61%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEY 451
            G TPL  A R GH+E+V +LL+AGA+V+       TPL +A      EVV+LLLE 
Sbjct: 34  NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 90

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 65.8 bits (162), Expect = 1e-13
 Identities = 29/88 (32%), Positives = 51/88 (57%)

Query: 529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT 588
           +T ++ A   G++ ++KLLL A  D+    K+G TPL  A +  +LE +++L++  A + 
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 62

Query: 589 AVDKRGDTVLHIAMRARSKTIVEVFIRN 616
           A DK G T LH+A R     +V++ +  
Sbjct: 63  AKDKNGRTPLHLAARNGHLEVVKLLLEA 90

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 48.5 bits (117), Expect = 1e-07
 Identities = 19/42 (45%), Positives = 27/42 (64%)

Query: 290 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSA 331
           G TPL  A R GH+E+V +LL+AGA+V+        PL+ +A
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAA 43

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 47.7 bits (115), Expect = 3e-07
 Identities = 19/55 (34%), Positives = 33/55 (60%)

Query: 560 DGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI 614
           +G TPL  A +  +LE +++L++  A + A DK G T LH+A R     +V++ +
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 55

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 42.0 bits (100), Expect = 4e-05
 Identities = 15/26 (57%), Positives = 19/26 (73%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGA 420
            G TPL  A R GH+E+V +LL+AGA
Sbjct: 67  NGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 37.7 bits (89), Expect = 9e-04
 Identities = 33/164 (20%), Positives = 51/164 (31%), Gaps = 77/164 (46%)

Query: 18  LIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSL 77
           L  A + GH  +V+ LL+   DV+                             K+K+   
Sbjct: 6   LHLAARNGHLEVVKLLLEAGADVNA----------------------------KDKN--- 34

Query: 78  KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLD 137
              +T ++ A   G++ ++KLLL A  D+                               
Sbjct: 35  --GRTPLHLAARNGHLEVVKLLLEAGADVNAK---------------------------- 64

Query: 138 SLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGA 181
                           D NG T L  AA+ G L  V+ L+  GA
Sbjct: 65  ----------------DKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  121 bits (305), Expect = 4e-31
 Identities = 56/343 (16%), Positives = 91/343 (26%), Gaps = 87/343 (25%)

Query: 180 GADVNAEDNDNWSPLTYAAREGYTDVCAELLD-------HGADLEHRDM-GGWSPLMWAS 231
            A        +   +  A  +        LL           D E +D   G + L+ A 
Sbjct: 3   SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAM 62

Query: 232 ---YKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKV 288
              + G  DT+ALLLD     ++                        +K+    +  D  
Sbjct: 63  LNLHNGQNDTIALLLDVARKTDS------------------------LKQFVNASYTDSY 98

Query: 289 Y-GTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTV 347
           Y G T L  A  + ++ +V +L++ GA+V  A    +           F E     PL+ 
Sbjct: 99  YKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGE----LPLS- 153

Query: 348 GLYAKWGSGK--SFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACR 405
            L A         FLL            Q  D +              S G T L     
Sbjct: 154 -LAACTNQLAIVKFLLQN--------SWQPADISARD-----------SVGNTVLHALVE 193

Query: 406 KGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTA 465
                + +                 T  + +       +   L          ++ G T 
Sbjct: 194 VADNTVDN-----------------TKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTP 236

Query: 466 LTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHR 508
           L +A   G   +   +L    +              A    H 
Sbjct: 237 LALAASSGKIGVLAYILQREIH-------EPECRHAAAHHHHH 272

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  119 bits (301), Expect = 2e-30
 Identities = 51/306 (16%), Positives = 80/306 (26%), Gaps = 89/306 (29%)

Query: 151 DDRDDNGGTALMFAAQKGK-------LSFVRELVTRGADVNAEDNDN-WSPLTYA---AR 199
                    ++  A  +         L F++    R  D   +D +   + L  A     
Sbjct: 7   KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLH 66

Query: 200 EGYTDVCAELLDHGADLEH-----------RDMGGWSPLMWASYKGHTDTVALLLDKNAD 248
            G  D  A LLD     +                G + L  A  + +   V LL++  AD
Sbjct: 67  NGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD 126

Query: 249 VNAHGNYHISS--------------LIWAAGRGYTEIVALLVKKG---AKVNVGDKVYGT 291
           V A  N                   L  AA      IV  L++     A ++  D   G 
Sbjct: 127 VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDS-VGN 185

Query: 292 TPLVWACRKGHVEIV---------DILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLA 342
           T L          +          + +L  GA +               L +I +  GL 
Sbjct: 186 TVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTL----------KLEEITNRKGL- 234

Query: 343 TPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVW 402
           TPL   L A  G             + +  ++ +                          
Sbjct: 235 TPLA--LAASSGK---------IGVLAYILQREIH------------------EPECRHA 265

Query: 403 ACRKGH 408
           A    H
Sbjct: 266 AAHHHH 271

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  116 bits (291), Expect = 4e-29
 Identities = 44/262 (16%), Positives = 77/262 (29%), Gaps = 62/262 (23%)

Query: 395 YGTTPLVWACRKGHVEIVDILL-------KAGANVDV-AGLYCWTPLLVATL---GNFTE 443
           Y    +  A  + + + ++ LL       K   + +        T LL A L       +
Sbjct: 12  YDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQND 71

Query: 444 VVELLLEYKPNVNAL-----------DKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD 492
            + LLL+     ++L              G TAL IA +     +  LL+ +GA +    
Sbjct: 72  TIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAA 131

Query: 493 RSGDSN--------------LIHAVKGGHRGIVEALLKK---YVDVDIPGKERKTAVYTA 535
                               L  A       IV+ LL+      D+        T ++  
Sbjct: 132 NGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHAL 191

Query: 536 VEKGNVPIL----------------KLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQM 579
           VE  +  +                   L       EI  + G TPL  A  +  +  +  
Sbjct: 192 VEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAY 251

Query: 580 LIDKKAKITAVDKRGDTVLHIA 601
           ++ +       +       H A
Sbjct: 252 ILQR-------EIHEPECRHAA 266

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 91.4 bits (227), Expect = 1e-20
 Identities = 42/258 (16%), Positives = 78/258 (30%), Gaps = 54/258 (20%)

Query: 5   DVSSKRDRSGDSNLIHAV---KGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQ 61
           D   K   +G + L+ A+     G    +  LL      D                    
Sbjct: 45  DSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL------------------ 86

Query: 62  RSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVS 121
               +  ++ +   S  + +TA++ A+E+ N+ ++ LL+    D++ A        +   
Sbjct: 87  ----KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGR 142

Query: 122 LCYRTLQS--YIA--EDNLDSLQTFLENKRTVAD--DRDDNGGTALMFAAQKGK------ 169
             +   +    +A   + L  ++  L+N    AD   RD  G T L    +         
Sbjct: 143 PGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNT 202

Query: 170 ----------LSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHR 219
                     L    +L          +    +PL  AA  G   V A +L         
Sbjct: 203 KFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH---- 258

Query: 220 DMGGWSPLMWASYKGHTD 237
                     A++  H  
Sbjct: 259 ---EPECRHAAAHHHHHH 273

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 88.3 bits (219), Expect = 1e-19
 Identities = 45/254 (17%), Positives = 76/254 (29%), Gaps = 57/254 (22%)

Query: 418 AGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKP-------NVNALDKD-GCTALTIA 469
             A      LY    +  A   +  + +E LL +         +    D + G T L  A
Sbjct: 2   VSAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKA 61

Query: 470 ---CKDGYYEIAVLLLNSGAYINIQDRSGDSN-----------LIHAVKGGHRGIVEALL 515
                +G  +   LLL+     +   +  +++           L  A++  +  +V  L+
Sbjct: 62  MLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLV 121

Query: 516 KKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLE 575
           +   DV                                       G+ PL  A  T  L 
Sbjct: 122 ENGADVQAAANGD-------------------FFKKTKGRPGFYFGELPLSLAACTNQLA 162

Query: 576 AIQMLIDK---KAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYR------- 625
            ++ L+      A I+A D  G+TVLH  +     T+          N +L         
Sbjct: 163 IVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPT 222

Query: 626 ------PNKAGETP 633
                  N+ G TP
Sbjct: 223 LKLEEITNRKGLTP 236

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  116 bits (292), Expect = 4e-31
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 3/112 (2%)

Query: 164 AAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGG 223
            +          LV RG+ +    +D    L  AAR G  D    L+ +GAD+  +D  G
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMG---SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 224 WSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
            +PL  A+  GH + V LLL+  ADV A   +  ++   +   G  ++  +L
Sbjct: 58  STPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  113 bits (286), Expect = 3e-30
 Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 4/113 (3%)

Query: 197 AAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYH 256
            +   +    + L+  G+ +          L+ A+  G  D V +L+   ADV A     
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSD---LGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 257 ISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDIL 309
            + L  AA  G+ E+V LL++ GA V   DK +G T    +   G+ ++ +IL
Sbjct: 58  STPLHLAARNGHLEVVKLLLEAGADVXAQDK-FGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  109 bits (275), Expect = 8e-29
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 4/102 (3%)

Query: 230 ASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVY 289
            S   H    + L+ + + + +        L+ AA  G  + V +L+  GA V   DK  
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSDLG---KKLLEAARAGQDDEVRILMANGADVAAKDK-N 56

Query: 290 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSA 331
           G+TPL  A R GH+E+V +LL+AGA+V     +       S 
Sbjct: 57  GSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISI 98

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  108 bits (273), Expect = 2e-28
 Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 3/112 (2%)

Query: 403 ACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDG 462
                H      L+  G+++          LL A      + V +L+    +V A DK+G
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSDL---GKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 463 CTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
            T L +A ++G+ E+  LLL +GA +  QD+ G +    ++  G+  + E L
Sbjct: 58  STPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  103 bits (259), Expect = 1e-26
 Identities = 31/91 (34%), Positives = 48/91 (52%)

Query: 152 DRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLD 211
               + G  L+ AA+ G+   VR L+  GADV A+D +  +PL  AAR G+ +V   LL+
Sbjct: 19  HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLE 78

Query: 212 HGADLEHRDMGGWSPLMWASYKGHTDTVALL 242
            GAD+  +D  G +    +   G+ D   +L
Sbjct: 79  AGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 87.6 bits (218), Expect = 5e-21
 Identities = 32/86 (37%), Positives = 44/86 (51%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
               L+ A R G  + V IL+  GA+V        TPL +A      EVV+LLLE   +V
Sbjct: 24  LGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV 83

Query: 456 NALDKDGCTALTIACKDGYYEIAVLL 481
            A DK G TA  I+  +G  ++A +L
Sbjct: 84  XAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 86.5 bits (215), Expect = 1e-20
 Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 3/112 (2%)

Query: 436 ATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSG 495
            +  +       L+    ++ +   D    L  A + G  +   +L+ +GA +  +D++G
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGS---DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 496 DSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLL 547
            + L  A + GH  +V+ LL+   DV    K  KTA   +++ GN  + ++L
Sbjct: 58  STPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 74.1 bits (183), Expect = 3e-16
 Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 502 AVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDG 561
                H      L+ +   +          +  A   G    +++L+    D+    K+G
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSDLG---KKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 562 DTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVF 613
            TPL  A +  +LE +++L++  A + A DK G T   I++   ++ + E+ 
Sbjct: 58  STPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 69.9 bits (172), Expect = 7e-15
 Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 3/112 (2%)

Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER 528
                ++  +  L+  G+++          L+ A + G    V  L+    DV    K  
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMG---SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQML 580
            T ++ A   G++ ++KLLL A  D+    K G T    ++   N +  ++L
Sbjct: 58  STPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 66.1 bits (162), Expect = 2e-13
 Identities = 28/153 (18%), Positives = 47/153 (30%), Gaps = 44/153 (28%)

Query: 263 AAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLW 322
            +   +    + LV +G+ +           L+ A R G  + V IL+  GA+V      
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGS----DLGKKLLEAARAGQDDEVRILMANGADVAAKDKN 56

Query: 323 AYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTF 382
              PL+            LA        A+ G           E +K     G D     
Sbjct: 57  GSTPLH------------LA--------ARNGH---------LEVVKLLLEAGADVX--- 84

Query: 383 SSLLFVLVMHLSYGTTPLVWACRKGHVEIVDIL 415
                       +G T    +   G+ ++ +IL
Sbjct: 85  --------AQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 59.9 bits (146), Expect = 2e-11
 Identities = 19/54 (35%), Positives = 31/54 (57%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELL 448
            G+TPL  A R GH+E+V +LL+AGA+V     +  T   ++      ++ E+L
Sbjct: 56  NGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 58.4 bits (142), Expect = 9e-11
 Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 535 AVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRG 594
                +      L+     +     D    LL+A +    + +++L+   A + A DK G
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMG---SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 595 DTVLHIAMRARSKTIVEVFIRN 616
            T LH+A R     +V++ +  
Sbjct: 58  STPLHLAARNGHLEVVKLLLEA 79

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 56.8 bits (138), Expect = 3e-10
 Identities = 26/189 (13%), Positives = 43/189 (22%), Gaps = 80/189 (42%)

Query: 21  AVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSLKER 80
                H      L+ +   +                                        
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSDL------------------------------------ 24

Query: 81  KTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQ 140
              +  A   G    +++L+    D+                                  
Sbjct: 25  GKKLLEAARAGQDDEVRILMANGADVAA-------------------------------- 52

Query: 141 TFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAARE 200
                       +D NG T L  AA+ G L  V+ L+  GADV A+D    +    +   
Sbjct: 53  ------------KDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDN 100

Query: 201 GYTDVCAEL 209
           G  D+   L
Sbjct: 101 GNEDLAEIL 109

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  113 bits (283), Expect = 1e-27
 Identities = 43/215 (20%), Positives = 69/215 (32%), Gaps = 29/215 (13%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGN---FTEVVELLLEY 451
           +G TPL W     ++E+V  L+K G+N         + L+ A        +   E LL+Y
Sbjct: 130 HGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDY 189

Query: 452 -KPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGI 510
             P +   D    T L                           SG +    A K     +
Sbjct: 190 LYPCLILEDSMNRTILHHII---------------------ITSGMTGCSAAAKYYLDIL 228

Query: 511 VEALLKKYVDVDIPGKERKTAVYTA----VEKGNVPILKLLLTANPDLEIATKDGDTPLL 566
           +  ++KK       G   K +         +   +  L L       L     +GDT L 
Sbjct: 229 MGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLN 288

Query: 567 KAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIA 601
            A +  N+  +  L+D  A     +K G   +   
Sbjct: 289 IAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 323

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  113 bits (283), Expect = 1e-27
 Identities = 41/186 (22%), Positives = 61/186 (32%), Gaps = 21/186 (11%)

Query: 154 DDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREG---YTDVCAELL 210
           D++G T L +      L  V+ LV  G++    DN   S L  A +      +     LL
Sbjct: 128 DEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALL 187

Query: 211 DH-GADLEHRDMGGWSPL----MWASYKGHTDTVALLLD------------KNADVNAHG 253
           D+    L   D    + L    + +   G +      LD                     
Sbjct: 188 DYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEK 247

Query: 254 NYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAG 313
               +           E + L       +N  D   G T L  A R G++ IVD LL  G
Sbjct: 248 ESKPNDKNGERKDSILENLDLKWIIANMLNAQDS-NGDTCLNIAARLGNISIVDALLDYG 306

Query: 314 ANVDVA 319
           A+  +A
Sbjct: 307 ADPFIA 312

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  106 bits (265), Expect = 3e-25
 Identities = 48/262 (18%), Positives = 88/262 (33%), Gaps = 25/262 (9%)

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGN-FTEVVELLLEYK 452
                 L         E+   L    +N +  G          +  +   EV +     +
Sbjct: 61  MKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQ 120

Query: 453 PNVNA-LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGH---R 508
            N+N  +D+ G T L         E+   L+  G+     D  G+S L+ AVK  +    
Sbjct: 121 LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDS 180

Query: 509 GIVEALLKK-YVDVDIPGKERKTAVYTAVEKGNVP------------ILKLLLTANPDLE 555
           G  EALL   Y  + +     +T ++  +    +             ++  ++       
Sbjct: 181 GTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPI 240

Query: 556 IATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAV----DKRGDTVLHIAMRARSKTIVE 611
            +  +              ++I   +D K  I  +    D  GDT L+IA R  + +IV+
Sbjct: 241 QSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVD 300

Query: 612 VFIRNPKNNILLYRPNKAGETP 633
             +         +  NK+G  P
Sbjct: 301 ALL---DYGADPFIANKSGLRP 319

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  102 bits (254), Expect = 7e-24
 Identities = 57/356 (16%), Positives = 100/356 (28%), Gaps = 72/356 (20%)

Query: 180 GADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHR-----------DMGGWSPLM 228
             D      D+             D+ ++ L     +               M   + L 
Sbjct: 9   SGDNENNGTDDNDRTAGPIITFTHDLTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQ 68

Query: 229 WASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAG-RGYTEIVALLVKKGAKVNVGDK 287
              +    +    L + +++ N+ G          +      E+          +N+   
Sbjct: 69  RLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVD 128

Query: 288 VYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTV 347
            +G TPL W     ++E+V  L+K G+N                  D   E    + L  
Sbjct: 129 EHGNTPLHWLTSIANLELVKHLVKHGSNRLYG--------------DNMGE----SCL-- 168

Query: 348 GLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHL----SYGTTPLVWA 403
                               +K  +      + TF +LL  L   L    S   T L   
Sbjct: 169 --------------------VKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHI 208

Query: 404 CRKGHVE------------IVDILLKAGANVDVAGLYCWTPLLVATLGN----FTEVVEL 447
                +             ++  ++K       +G            G       E ++L
Sbjct: 209 IITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDL 268

Query: 448 LLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAV 503
                  +NA D +G T L IA + G   I   LL+ GA   I ++SG   +    
Sbjct: 269 KWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 324

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 82.8 bits (204), Expect = 2e-17
 Identities = 33/240 (13%), Positives = 62/240 (25%), Gaps = 65/240 (27%)

Query: 78  KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLD 137
           +   T ++      N+ ++K L+    +                                
Sbjct: 129 EHGNTPLHWLTSIANLELVKHLVKHGSNRLY----------------------------- 159

Query: 138 SLQTFLENKRTVADDRDDNGGTALMFAAQKG----KLSFVRELVTRGADVNAEDNDNWSP 193
                           D+ G + L+ A +        +F   L      +  ED+ N + 
Sbjct: 160 ---------------GDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTI 204

Query: 194 LTYAARE-----------GYTDVCAELL-DHGADLEHRDMGGWSPLMWASYKGHTDTVAL 241
           L +                Y D+    +                           D++  
Sbjct: 205 LHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILE 264

Query: 242 LLDKN----ADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWA 297
            LD        +NA  +   + L  AA  G   IV  L+  GA   + +K  G  P+ + 
Sbjct: 265 NLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANK-SGLRPVDFG 323

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 74.3 bits (182), Expect = 2e-14
 Identities = 29/164 (17%), Positives = 50/164 (30%), Gaps = 20/164 (12%)

Query: 394 SYGTTPLVWACRKGHV----EIVDILLKAGANVDVAGLYCWTPL------------LVAT 437
           + G + LV A +  +         +L      + +      T L              A 
Sbjct: 162 NMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAA 221

Query: 438 LGNFTEVVELLLEYKPNVNALDKDGCTALTIA----CKDGYYEIAVLLLNSGAYINIQDR 493
                 ++  +++ +        +   +         KD   E   L       +N QD 
Sbjct: 222 KYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDS 281

Query: 494 SGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVE 537
           +GD+ L  A + G+  IV+ALL    D  I  K     V     
Sbjct: 282 NGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAG 325

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 70.1 bits (171), Expect = 4e-13
 Identities = 41/242 (16%), Positives = 76/242 (31%), Gaps = 56/242 (23%)

Query: 5   DVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRST 64
           +++   D  G++ L       +  +V+ L+K   +                         
Sbjct: 122 NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLY---------------------- 159

Query: 65  TRNLLDKNKHKSLKERKTAVYTAVEKGNVP----ILKLLLTANPDLEIATKTLPRSDSM- 119
                  +        ++ +  AV+  N         LL    P L +        DSM 
Sbjct: 160 ------GDNMG-----ESCLVKAVKSVNNYDSGTFEALLDYLYPCLILE-------DSMN 201

Query: 120 -------VSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSF 172
                  +     T  S  A+  LD L  ++  K+        N   +        +   
Sbjct: 202 RTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDS 261

Query: 173 VRELV----TRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLM 228
           + E +         +NA+D++  + L  AAR G   +   LLD+GAD    +  G  P+ 
Sbjct: 262 ILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVD 321

Query: 229 WA 230
           + 
Sbjct: 322 FG 323

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  108 bits (271), Expect = 2e-26
 Identities = 47/274 (17%), Positives = 81/274 (29%), Gaps = 61/274 (22%)

Query: 189 DNWSPLTYAAR---EGYTDVCAELLDHGADLEHRDMG----GWSPLMWA---SYKGHTDT 238
           +        +R   +G   + + LL H   L   +      G + L  A      G  DT
Sbjct: 5   NRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDT 64

Query: 239 VALLLDK-----------NADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDK 287
           + +LLD            N+          ++L  A  R     V LLV+KGA V+   +
Sbjct: 65  IPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQAR 124

Query: 288 -------------VYGTTPLVWACRKGHVEIVDILLKAG---ANVDVAGLWAYMPLYSSA 331
                         +G  PL  A       IV  L + G   A++          L++  
Sbjct: 125 GRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALV 184

Query: 332 LADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVM 391
                +         +            LL K  +                     +  +
Sbjct: 185 AIADNTRENTKFVTKMY---------DLLLIKCAKL---------------FPDTNLEAL 220

Query: 392 HLSYGTTPLVWACRKGHVEIVDILLKAGANVDVA 425
             + G +PL+ A + G + I   +++       A
Sbjct: 221 LNNDGLSPLMMAAKTGKIGIFQHIIRREIADAAA 254

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  107 bits (269), Expect = 3e-26
 Identities = 37/186 (19%), Positives = 61/186 (32%), Gaps = 37/186 (19%)

Query: 152 DRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLD 211
           D    G TAL  A ++    +V  LV +GADV+A+    +          Y         
Sbjct: 88  DVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYF-------- 139

Query: 212 HGADLEHRDMGGWSPLMWASYKGHTDTVALLLDK---NADVNAHGNYHISSLIWAAGRG- 267
                      G  PL  A+       V  L +     AD+    +   + L        
Sbjct: 140 -----------GELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIAD 188

Query: 268 --------YTEIVALLVKKGAKVNVGDKV------YGTTPLVWACRKGHVEIVDILLKAG 313
                    T++  LL+ K AK+     +       G +PL+ A + G + I   +++  
Sbjct: 189 NTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRRE 248

Query: 314 ANVDVA 319
                A
Sbjct: 249 IADAAA 254

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  101 bits (252), Expect = 4e-24
 Identities = 43/254 (16%), Positives = 69/254 (27%), Gaps = 55/254 (21%)

Query: 394 SYGTTPLVWA----CRKGHVEIVDILLKAGANV----DVAGLYCWTPLLVATL---GNFT 442
            +    L          G   ++  LL     +            T L  A L       
Sbjct: 3   VFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRN 62

Query: 443 EVVELLLEYKP-----------NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQ 491
           + + +LL+                  +   G TAL IA +        LL+  GA ++ Q
Sbjct: 63  DTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ 122

Query: 492 DRSGDSN--------------LIHAVKGGHRGIVEALLKK---YVDVDIPGKERKTAVYT 534
            R                   L  A       IV  L +      D+        T ++ 
Sbjct: 123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHA 182

Query: 535 AVEKGN---------VPILKLLL-------TANPDLEIATKDGDTPLLKAVKTRNLEAIQ 578
            V   +           +  LLL              +   DG +PL+ A KT  +   Q
Sbjct: 183 LVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQ 242

Query: 579 MLIDKKAKITAVDK 592
            +I ++    A   
Sbjct: 243 HIIRREIADAAAHH 256

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 92.9 bits (231), Expect = 3e-21
 Identities = 41/267 (15%), Positives = 72/267 (26%), Gaps = 50/267 (18%)

Query: 255 YHISSLIWAAGRG----YTEIVALLVKKGAKVNVGDKV---YGTTPLVWA---CRKGHVE 304
           ++   L     RG       +++ L+    ++   +      G T L  A      G  +
Sbjct: 4   FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRND 63

Query: 305 IVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKL 364
            + ILL           +   P                T L +    +            
Sbjct: 64  TIPILLDIAEKTGNMREFINSPFRDV-------YYRGQTALHIA--IERRC--------- 105

Query: 365 KEEMKHFERQGVDP---TFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAG-- 419
           K  ++    +G D                 +  +G  PL  A       IV  L + G  
Sbjct: 106 KHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK 165

Query: 420 -ANVDVAGLYCWTPL---------LVATLGNFTEVVELLLEYKPNVNA-------LDKDG 462
            A++        T L                 T++ +LLL     +         L+ DG
Sbjct: 166 QADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDG 225

Query: 463 CTALTIACKDGYYEIAVLLLNSGAYIN 489
            + L +A K G   I   ++       
Sbjct: 226 LSPLMMAAKTGKIGIFQHIIRREIADA 252

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 91.4 bits (227), Expect = 1e-20
 Identities = 45/272 (16%), Positives = 79/272 (29%), Gaps = 67/272 (24%)

Query: 287 KVYGTTPLVWA----CRKGHVEIVDILLKAGANVDVAGLWAYM----PLYSSALADIFSE 338
           KV+    L          G   ++  LL     +              L  + L      
Sbjct: 2   KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGR 61

Query: 339 PGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTT 398
                 L + +  K G+ + F+    ++                             G T
Sbjct: 62  NDTIPIL-LDIAEKTGNMREFINSPFRDVYY-------------------------RGQT 95

Query: 399 PLVWACRKGHVEIVDILLKAGANVD--------------VAGLYCWTPLLVATLGNFTEV 444
            L  A  +     V++L++ GA+V                   +   PL +A   N   +
Sbjct: 96  ALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHI 155

Query: 445 VELLLEYKP---NVNALDKDGCTAL---------TIACKDGYYEIAVLLLNSGAYIN--- 489
           V  L E      ++   D  G T L         T        ++  LLL   A +    
Sbjct: 156 VHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDT 215

Query: 490 ----IQDRSGDSNLIHAVKGGHRGIVEALLKK 517
               + +  G S L+ A K G  GI + ++++
Sbjct: 216 NLEALLNNDGLSPLMMAAKTGKIGIFQHIIRR 247

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 80.6 bits (199), Expect = 4e-17
 Identities = 43/275 (15%), Positives = 75/275 (27%), Gaps = 75/275 (27%)

Query: 5   DVSSKRDRSGDSNLIHAV---KGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQ 61
           D   +   +G + L  A+     G    +  LL          +                
Sbjct: 37  DEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE---------------- 80

Query: 62  RSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVS 121
                  ++          +TA++ A+E+     ++LL+    D+               
Sbjct: 81  ------FINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH-------------- 120

Query: 122 LCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRG- 180
                     A+      Q                G   L  AA   +   V  L   G 
Sbjct: 121 ----------AQARGRFFQP------KDEGGYFYFGELPLSLAACTNQPHIVHYLTENGH 164

Query: 181 --ADVNAEDNDNWSPLTYAA---------REGYTDVCAELLDHGADLEH-------RDMG 222
             AD+  +D+   + L              +  T +   LL   A L          +  
Sbjct: 165 KQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNND 224

Query: 223 GWSPLMWASYKGHTDTVALLLDKNA-DVNAHGNYH 256
           G SPLM A+  G       ++ +   D  AH ++H
Sbjct: 225 GLSPLMMAAKTGKIGIFQHIIRREIADAAAHHHHH 259

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 62.9 bits (153), Expect = 4e-11
 Identities = 30/191 (15%), Positives = 51/191 (26%), Gaps = 43/191 (22%)

Query: 464 TALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSN----LIHAV---KGGHRGIVEALLK 516
             ++    DG   +   LL     +  ++    S     L  A+     G    +  LL 
Sbjct: 11  DIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLD 70

Query: 517 KYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEA 576
                    +                        N         G T L  A++ R    
Sbjct: 71  IAEKTGNMRE----------------------FINSPFRDVYYRGQTALHIAIERRCKHY 108

Query: 577 IQMLIDKKAKITAVDK--------------RGDTVLHIAMRARSKTIVEVFIRNPKNNIL 622
           +++L++K A + A  +               G+  L +A       IV     N      
Sbjct: 109 VELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD 168

Query: 623 LYRPNKAGETP 633
           L R +  G T 
Sbjct: 169 LRRQDSRGNTV 179

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 75.6 bits (185), Expect = 8e-15
 Identities = 30/91 (32%), Positives = 39/91 (42%)

Query: 154 DDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHG 213
             +  T L+ A     L     L+  GA+VN  D+    PL +A   G+T +    L  G
Sbjct: 232 GQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRG 291

Query: 214 ADLEHRDMGGWSPLMWASYKGHTDTVALLLD 244
           ADL  RD  G  PL  A    + D V LL  
Sbjct: 292 ADLGARDSEGRDPLTIAMETANADIVTLLRL 322

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 71.0 bits (173), Expect = 2e-13
 Identities = 29/100 (29%), Positives = 40/100 (40%)

Query: 452 KPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIV 511
             N     +D  T L  A           LL +GA +N  D +G   L HA   GH G+ 
Sbjct: 225 DVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLA 284

Query: 512 EALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN 551
              LK+  D+     E +  +  A+E  N  I+ LL  A 
Sbjct: 285 CLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAK 324

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 70.6 bits (172), Expect = 3e-13
 Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 2/113 (1%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
             TPL+ A     +   + LL+ GANV+ A      PL  AT+   T +  L L+   ++
Sbjct: 235 NATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADL 294

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHR 508
            A D +G   LTIA +    +I  LL    A +   + +             R
Sbjct: 295 GARDSEGRDPLTIAMETANADIVTLLRL--AKMREAEAAQGQAGDETYLDIFR 345

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 69.0 bits (168), Expect = 1e-12
 Identities = 38/149 (25%), Positives = 54/149 (36%), Gaps = 2/149 (1%)

Query: 369 KHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVD--VAG 426
           K   R       +        +  L  G      +     +  +   L  GA+V+    G
Sbjct: 173 KPSIRPRPGSLRSKPEPPSEDLGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGG 232

Query: 427 LYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGA 486
               TPL+ AT  N     E LL+   NVN  D  G   L  A   G+  +A L L  GA
Sbjct: 233 QDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGA 292

Query: 487 YINIQDRSGDSNLIHAVKGGHRGIVEALL 515
            +  +D  G   L  A++  +  IV  L 
Sbjct: 293 DLGARDSEGRDPLTIAMETANADIVTLLR 321

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 65.2 bits (158), Expect = 2e-11
 Identities = 38/173 (21%), Positives = 55/173 (31%), Gaps = 36/173 (20%)

Query: 145 NKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNA--EDNDNWSPLTYAAREGY 202
              +        G      +     L  + + +  GADVN      DN +PL  A     
Sbjct: 188 EPPSEDLGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANS 247

Query: 203 TDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIW 262
              C  LL +GA++   D  G  PL  A+  GHT                          
Sbjct: 248 LLACEFLLQNGANVNQADSAGRGPLHHATILGHT-------------------------- 281

Query: 263 AAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGAN 315
                   +  L +K+GA +   D   G  PL  A    + +IV +L  A   
Sbjct: 282 -------GLACLFLKRGADLGARDSE-GRDPLTIAMETANADIVTLLRLAKMR 326

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 61.7 bits (149), Expect = 3e-10
 Identities = 20/97 (20%), Positives = 35/97 (36%)

Query: 524 PGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDK 583
            G++  T +  A    ++   + LL    ++  A   G  PL  A    +     + + +
Sbjct: 231 GGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKR 290

Query: 584 KAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNN 620
            A + A D  G   L IAM   +  IV +        
Sbjct: 291 GADLGARDSEGRDPLTIAMETANADIVTLLRLAKMRE 327

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 56.7 bits (136), Expect = 1e-08
 Identities = 28/124 (22%), Positives = 41/124 (33%), Gaps = 3/124 (2%)

Query: 127 LQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAE 186
           L    A ++L + +  L+N   V +  D  G   L  A   G        + RGAD+ A 
Sbjct: 239 LIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHHATILGHTGLACLFLKRGADLGAR 297

Query: 187 DNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKN 246
           D++   PLT A      D    LL      E     G             D   +  D  
Sbjct: 298 DSEGRDPLTIAMETANAD-IVTLLRLAKMREAEAAQG-QAGDETYLDIFRDFSLMASDDP 355

Query: 247 ADVN 250
             ++
Sbjct: 356 EKLS 359

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 54.4 bits (130), Expect = 6e-08
 Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 3/99 (3%)

Query: 223 GWSPLMWASYKGHTDTVALLLDKNADVNA--HGNYHISSLIWAAGRGYTEIVALLVKKGA 280
           G      + +     T+A  L   ADVN    G  + + LI A           L++ GA
Sbjct: 200 GALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGA 259

Query: 281 KVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVA 319
            VN  D   G  PL  A   GH  +  + LK GA++   
Sbjct: 260 NVNQADSA-GRGPLHHATILGHTGLACLFLKRGADLGAR 297

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 51.3 bits (122), Expect = 5e-07
 Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 5/111 (4%)

Query: 533 YTAVEKGNVPILKLLL--TANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAV 590
             +    ++P +   L   A+ +     +D  TPL++A    +L A + L+   A +   
Sbjct: 205 RASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQA 264

Query: 591 DKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQ 641
           D  G   LH A       +  +F++   +   L   +  G  P +I M   
Sbjct: 265 DSAGRGPLHHATILGHTGLACLFLKRGAD---LGARDSEGRDPLTIAMETA 312

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 73.1 bits (179), Expect = 2e-14
 Identities = 21/118 (17%), Positives = 40/118 (33%), Gaps = 4/118 (3%)

Query: 145 NKRTVADDRDDNGGTALMFAAQKGKLSFVRE---LVTRGADVNAEDNDNWSPLTYAAREG 201
            ++    +  +   TAL  A +    + +     LV    +++ +     + L Y     
Sbjct: 157 TEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTD 216

Query: 202 YTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLD-KNADVNAHGNYHIS 258
             +    LL   A +E  +  G +PL  A    H     LL    +   N+H +    
Sbjct: 217 NAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVHVEYE 274

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 70.0 bits (171), Expect = 2e-13
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 3/89 (3%)

Query: 431 TPLLVATL---GNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAY 487
           T L +A          +V+ L++   N++     G TAL   C     E   LLL   A 
Sbjct: 171 TALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKAS 230

Query: 488 INIQDRSGDSNLIHAVKGGHRGIVEALLK 516
           I I + SG++ L  A +  H    E L +
Sbjct: 231 IEIANESGETPLDIAKRLKHEHCEELLTQ 259

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 69.3 bits (169), Expect = 4e-13
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 3/92 (3%)

Query: 396 GTTPLVWACRKG---HVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYK 452
             T L  A R      + IVD L++   N+D       T L    L +  E ++LLL  K
Sbjct: 169 DETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGK 228

Query: 453 PNVNALDKDGCTALTIACKDGYYEIAVLLLNS 484
            ++   ++ G T L IA +  +     LL  +
Sbjct: 229 ASIEIANESGETPLDIAKRLKHEHCEELLTQA 260

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 65.8 bits (160), Expect = 6e-12
 Identities = 23/161 (14%), Positives = 51/161 (31%), Gaps = 43/161 (26%)

Query: 164 AAQKGKLSFVRELVTRGADVNAEDN------DNWSPLTYAAREG---YTDVCAELLDHGA 214
           A +   +  + +    G D+  +         + + L  A R        +   L+ +  
Sbjct: 137 AVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSG 196

Query: 215 DLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVAL 274
           +L+ +   G + L +     +                                  E + L
Sbjct: 197 NLDKQTGKGSTALHYCCLTDNA---------------------------------ECLKL 223

Query: 275 LVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGAN 315
           L++  A + + ++  G TPL  A R  H    ++L +A + 
Sbjct: 224 LLRGKASIEIANES-GETPLDIAKRLKHEHCEELLTQALSG 263

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 63.5 bits (154), Expect = 3e-11
 Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 3/95 (3%)

Query: 459 DKDGCTALTIACKDG---YYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
            +   TAL +A +        I   L+ +   ++ Q   G + L +     +   ++ LL
Sbjct: 166 HEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLL 225

Query: 516 KKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTA 550
           +    ++I  +  +T +  A    +    +LL  A
Sbjct: 226 RGKASIEIANESGETPLDIAKRLKHEHCEELLTQA 260

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 58.1 bits (140), Expect = 2e-09
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%)

Query: 530 TAVYTAVEKGN---VPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAK 586
           TA++ AV   +   + I+  L+  + +L+  T  G T L     T N E +++L+  KA 
Sbjct: 171 TALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKAS 230

Query: 587 ITAVDKRGDTVLHIAMRARSKTIVEVFI 614
           I   ++ G+T L IA R + +   E+  
Sbjct: 231 IEIANESGETPLDIAKRLKHEHCEELLT 258

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 53.1 bits (127), Expect = 9e-08
 Identities = 16/59 (27%), Positives = 28/59 (47%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           G+T L + C   + E + +LL+  A++++A     TPL +A         ELL +    
Sbjct: 205 GSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 49.6 bits (118), Expect = 1e-06
 Identities = 16/100 (16%), Positives = 33/100 (33%), Gaps = 10/100 (10%)

Query: 229 WASYKGHTDTVALLLDKNADVNAHGNYHISS---------LIWAAGRGYTEIVALLVKKG 279
            A        +        D+                    + +  R    IV  LV+  
Sbjct: 136 EAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS 195

Query: 280 AKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVA 319
             ++      G+T L + C   + E + +LL+  A++++A
Sbjct: 196 GNLDKQTGK-GSTALHYCCLTDNAECLKLLLRGKASIEIA 234

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 48.8 bits (116), Expect = 2e-06
 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 5/105 (4%)

Query: 482 LNSGAYINIQDRSGDSN--LIHAVKGGHRG---IVEALLKKYVDVDIPGKERKTAVYTAV 536
           ++    I + +        L  AV+   R    IV+ L++   ++D    +  TA++   
Sbjct: 154 VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCC 213

Query: 537 EKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLI 581
              N   LKLLL     +EIA + G+TPL  A + ++    ++L 
Sbjct: 214 LTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLT 258

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 47.3 bits (112), Expect = 7e-06
 Identities = 23/131 (17%), Positives = 49/131 (37%), Gaps = 13/131 (9%)

Query: 516 KKYVDVD-IPGKERKTAVYTAVEKGNVPILKLLLTANPDLEI------ATKDGDTPLLKA 568
           ++Y          +  ++  AV+  ++  L        DL          +  +T L  A
Sbjct: 117 RRYARKKHADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLA 176

Query: 569 VKTRN---LEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYR 625
           V++ +   L  +  L+     +     +G T LH      +   +++ +R   +   +  
Sbjct: 177 VRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKAS---IEI 233

Query: 626 PNKAGETPYSI 636
            N++GETP  I
Sbjct: 234 ANESGETPLDI 244

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 69.6 bits (170), Expect = 4e-13
 Identities = 23/101 (22%), Positives = 35/101 (34%), Gaps = 3/101 (2%)

Query: 145 NKRTVADDRDDNGGTALMFAAQKGK---LSFVRELVTRGADVNAEDNDNWSPLTYAAREG 201
            +     D        L  A +      L  V  ++  G  ++A+  D  + L YAA   
Sbjct: 178 GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYN 237

Query: 202 YTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALL 242
             D    LL   A +   +  G + L  A  K H +   LL
Sbjct: 238 QPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELL 278

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 68.5 bits (167), Expect = 9e-13
 Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 396 GTTPLVWACRKGH---VEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYK 452
               L  A +  +   + +VD +++ G ++D       T L  A L N  + ++LLL+ +
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR 249

Query: 453 PNVNALDKDGCTALTIACKDGYYEIAVLLLNS 484
             V  +++ G TAL IA K  + E   LL  +
Sbjct: 250 ALVGTVNEAGETALDIARKKHHKECEELLEQA 281

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 66.9 bits (163), Expect = 3e-12
 Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 9/123 (7%)

Query: 403 ACRKGHVEIVDILLKAGANVDVAGLYC------WTPLLVATL---GNFTEVVELLLEYKP 453
           A     +  V      G +                 L +A          +V+ +++   
Sbjct: 158 AICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG 217

Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEA 513
           +++A   DG TAL  A      +   LLL   A +   + +G++ L  A K  H+   E 
Sbjct: 218 HLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEEL 277

Query: 514 LLK 516
           L +
Sbjct: 278 LEQ 280

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 65.0 bits (158), Expect = 1e-11
 Identities = 35/195 (17%), Positives = 58/195 (29%), Gaps = 45/195 (23%)

Query: 132 AEDNLDSLQTFLENK--RTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDN- 188
           AE ++ + + ++  K        R       L  A     L  V E    G D       
Sbjct: 124 AESDMGTRRDYIMAKYVEHRFARRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPG 183

Query: 189 -----DNWSPLTYAAREGYTD---VCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVA 240
                     L  A +        +   ++ +G  L+ +   G + L +A+     D + 
Sbjct: 184 PDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLK 243

Query: 241 LLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRK 300
           LLL                                 K  A V   ++  G T L  A +K
Sbjct: 244 LLL---------------------------------KGRALVGTVNEA-GETALDIARKK 269

Query: 301 GHVEIVDILLKAGAN 315
            H E  ++L +A A 
Sbjct: 270 HHKECEELLEQAQAG 284

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 62.7 bits (152), Expect = 7e-11
 Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 3/93 (3%)

Query: 461 DGCTALTIACKDGY---YEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKK 517
                L +A K        +   ++ +G +++ +   G++ L +A        ++ LLK 
Sbjct: 189 PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKG 248

Query: 518 YVDVDIPGKERKTAVYTAVEKGNVPILKLLLTA 550
              V    +  +TA+  A +K +    +LL  A
Sbjct: 249 RALVGTVNEAGETALDIARKKHHKECEELLEQA 281

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 56.9 bits (137), Expect = 5e-09
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 9/128 (7%)

Query: 496 DSNLIHAVKGGHRGIVEALLKKYVDVDIPGKER------KTAVYTAVEKGN---VPILKL 546
              L  A+       V        D   P          +  ++ AV+  N   +P++  
Sbjct: 152 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDF 211

Query: 547 LLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARS 606
           ++     L+    DG+T L  A      + +++L+  +A +  V++ G+T L IA +   
Sbjct: 212 IIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHH 271

Query: 607 KTIVEVFI 614
           K   E+  
Sbjct: 272 KECEELLE 279

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 52.3 bits (125), Expect = 2e-07
 Identities = 16/59 (27%), Positives = 24/59 (40%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           G T L +A      + + +LLK  A V        T L +A   +  E  ELL + +  
Sbjct: 226 GNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG 284

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 52.3 bits (125), Expect = 2e-07
 Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 1/72 (1%)

Query: 247 ADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIV 306
            D  A     +   +  A +    +V  +++ G  ++      G T L +A      + +
Sbjct: 184 PDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKA-ADGNTALHYAALYNQPDCL 242

Query: 307 DILLKAGANVDV 318
            +LLK  A V  
Sbjct: 243 KLLLKGRALVGT 254

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 46.9 bits (111), Expect = 9e-06
 Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 14/131 (10%)

Query: 517 KYVDVD--IPGKERKTAVYTAVEKGNVPILKLLLTANPDL------EIATKDGDTPLLKA 568
           KYV+             ++TA+   ++  +        D         A    +  L  A
Sbjct: 138 KYVEHRFARRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLA 197

Query: 569 V---KTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYR 625
           V      +L  +  +I     + A    G+T LH A        +++ ++       +  
Sbjct: 198 VKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRAL---VGT 254

Query: 626 PNKAGETPYSI 636
            N+AGET   I
Sbjct: 255 VNEAGETALDI 265

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 71.4 bits (174), Expect = 6e-13
 Identities = 100/665 (15%), Positives = 183/665 (27%), Gaps = 178/665 (26%)

Query: 25  GHRGIVEALLKKYV------DV-DIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSL 77
            ++ I+      +V      DV D+P  +    +  ++  + D  S T  L      K  
Sbjct: 17  QYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSK-- 74

Query: 78  KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSD------SMVSLCYRTLQSYI 131
             ++  V   VE+      K L++      I T+    S             Y   Q + 
Sbjct: 75  --QEEMVQKFVEEVLRINYKFLMSP-----IKTEQRQPSMMTRMYIEQRDRLYNDNQVF- 126

Query: 132 AEDNLDSLQTFLENKRTVADDRDDNG----GTALMFAAQKGKLSFVRELVTRGADVNAED 187
           A+ N+  LQ +L+ ++ + + R        G   +  +  GK     + V     V  + 
Sbjct: 127 AKYNVSRLQPYLKLRQALLELRPAKNVLIDG---VLGS--GKTWVALD-VCLSYKVQCKM 180

Query: 188 NDN--WSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDK 245
           +    W  L         +    +L+    L ++         W S   H+  + L +  
Sbjct: 181 DFKIFW--LNL----KNCNSPETVLEMLQKLLYQIDP-----NWTSRSDHSSNIKLRIHS 229

Query: 246 NADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWA-----CRK 300
                      +  L+    + Y     LLV           V       W      C+ 
Sbjct: 230 IQA-------ELRRLL--KSKPYEN--CLLVL--------LNVQ--NAKAWNAFNLSCK- 267

Query: 301 GHVEIVDILL--KAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKS 358
                  ILL  +     D           ++ ++       L       L  K+   + 
Sbjct: 268 -------ILLTTRFKQVTDFLS-----AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP 315

Query: 359 FLLPK----------------LKEEMKHFER-----------------QGVDPTFT---F 382
             LP+                +++ +  ++                    ++P      F
Sbjct: 316 QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF 375

Query: 383 SSL-LFVLVMHLSYGTTPLVWACRKGHV--EIVDILLKAG-ANVDVAGLYCWTP-LLVAT 437
             L +F    H+      L+W          +V+ L K               P + +  
Sbjct: 376 DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLEL 435

Query: 438 LGNFTEVVEL---LLE-YKPNVNALDKDGCTALTIACKDGY-YEIAVLLLNSGAYINIQD 492
                    L   +++ Y       D D      +   D Y Y           +I    
Sbjct: 436 KVKLENEYALHRSIVDHYNIP-KTFDSDDLIPPYL---DQYFYS----------HI---- 477

Query: 493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVD-IPGKERKTAVYTAVEKGNVPILKLLLTAN 551
             G     H     H   +      ++D   +  K R     +     +  IL  L    
Sbjct: 478 --GH----HLKNIEHPERMTLFRMVFLDFRFLEQKIRHD---STAWNASGSILNTLQ--- 525

Query: 552 PDLE-----IATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARS 606
             L+     I   D           R + AI   + K  +     K  D +L IA+ A  
Sbjct: 526 -QLKFYKPYICDNDPK-------YERLVNAILDFLPKIEENLICSKYTD-LLRIALMAED 576

Query: 607 KTIVE 611
           + I E
Sbjct: 577 EAIFE 581

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 4e-04
 Identities = 38/311 (12%), Positives = 90/311 (28%), Gaps = 87/311 (27%)

Query: 4   DDVSSKRD--------R----SGDSNLIHAVKGGHRGIV--------------EALLKKY 37
            +V + +         +    +    +   +       +              ++LL KY
Sbjct: 251 LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY 310

Query: 38  VDV---DIPGKVRKLSD-ALNVTDANDQRSTTRNLLDKNKHKSLKERKTAVYTAVEKGNV 93
           +D    D+P +V   +   L++   + +        D  KH +  +  T + +++     
Sbjct: 311 LDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT--WDNWKHVNCDKLTTIIESSLNVLEP 368

Query: 94  PILKLLLTA----NPDLEIATKTLPR---------SDSMVSLCYRTLQSYIAEDN----- 135
              + +        P   I T  L              +V+  ++   S + +       
Sbjct: 369 AEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHK--YSLVEKQPKESTI 426

Query: 136 -LDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPL 194
            + S+   LE K  + ++   +                 R +V         D+D+  P 
Sbjct: 427 SIPSIY--LELKVKLENEYALH-----------------RSIVDHYNIPKTFDSDDLIPP 467

Query: 195 TYAAREGYTDVCAELLDHGADLEHRDMGGWSP-----LMWASYK-GHTDT----VALLLD 244
                + Y    + +  H  ++EH +             +   K  H  T       +L+
Sbjct: 468 YL---DQY--FYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILN 522

Query: 245 KNADVNAHGNY 255
               +  +  Y
Sbjct: 523 TLQQLKFYKPY 533

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 57.6 bits (139), Expect = 6e-09
 Identities = 19/73 (26%), Positives = 35/73 (47%)

Query: 444 VVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAV 503
           +V+ +++   +++A   DG TAL  A      +   LLL   A +   + +G++ L  A 
Sbjct: 189 LVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIAR 248

Query: 504 KGGHRGIVEALLK 516
           K  H+   E L +
Sbjct: 249 KKHHKECEELLEQ 261

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 55.7 bits (134), Expect = 3e-08
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 396 GTTPLVWACR---KGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYK 452
               L  A +   +  + +VD +++ G ++D       T L  A L N  + ++LLL+ +
Sbjct: 171 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR 230

Query: 453 PNVNALDKDGCTALTIACKDGYYEIAVLL 481
             V  +++ G TAL IA K  + E   LL
Sbjct: 231 ALVGTVNEAGETALDIARKKHHKECEELL 259

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 52.2 bits (125), Expect = 4e-07
 Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 9/129 (6%)

Query: 494 SGDSNLIHAVKGGHRGIVEALLKKYVDVDIP------GKERKTAVYTAVE---KGNVPIL 544
                L  A+       V        D   P          +  ++ AV+   + ++P++
Sbjct: 131 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLV 190

Query: 545 KLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRA 604
             ++     L+    DG+T L  A      + +++L+  +A +  V++ G+T L IA + 
Sbjct: 191 DFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKK 250

Query: 605 RSKTIVEVF 613
             K   E+ 
Sbjct: 251 HHKECEELL 259

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 50.3 bits (120), Expect = 2e-06
 Identities = 26/136 (19%), Positives = 46/136 (33%), Gaps = 14/136 (10%)

Query: 517 KYVDVD--IPGKERKTAVYTAVEKGNVPILKLLLTANPDL------EIATKDGDTPLLKA 568
           KYV+             ++TA+   ++  +        D         A    +  L  A
Sbjct: 119 KYVEHRFARRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLA 178

Query: 569 VKT---RNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYR 625
           VK     +L  +  +I     + A    G+T LH A        +++ ++      L+  
Sbjct: 179 VKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLK---GRALVGT 235

Query: 626 PNKAGETPYSIDMNNQ 641
            N+AGET   I     
Sbjct: 236 VNEAGETALDIARKKH 251

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 48.7 bits (116), Expect = 4e-06
 Identities = 25/126 (19%), Positives = 40/126 (31%), Gaps = 9/126 (7%)

Query: 161 LMFAAQKGKLSFVRELVTRGADVNAE------DNDNWSPLTYAAREGYTD--VCAELL-D 211
           L  A     L  V E    G D                 L  A +          + +  
Sbjct: 136 LWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ 195

Query: 212 HGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEI 271
           +G  L+ +   G + L +A+     D + LLL   A V        ++L  A  + + E 
Sbjct: 196 NGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKEC 255

Query: 272 VALLVK 277
             LL +
Sbjct: 256 EELLEQ 261

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	651
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	100.0
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	100.0
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	100.0
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	100.0
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	100.0
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	100.0
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	100.0
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	100.0
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	100.0
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	100.0
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	100.0
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	100.0
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	100.0
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	100.0
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	100.0
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	100.0
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	100.0
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	100.0
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	100.0
2rfa_A	232	Transient receptor potential cation channel subfa	100.0
3hra_A	201	Ankyrin repeat family protein; structural protein;	100.0
4gpm_A	169	Engineered protein OR264; de novo protein, structu	100.0
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	100.0
2rfa_A	232	Transient receptor potential cation channel subfa	100.0
4gpm_A	169	Engineered protein OR264; de novo protein, structu	100.0
3hra_A	201	Ankyrin repeat family protein; structural protein;	100.0
2etb_A	256	Transient receptor potential cation channel subfam	100.0
2pnn_A	273	Transient receptor potential cation channel subfa	100.0
2etb_A	256	Transient receptor potential cation channel subfam	100.0
2pnn_A	273	Transient receptor potential cation channel subfa	100.0
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.98
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.97
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.97
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.97
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.97
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.97
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.97
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.97
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.97
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.97
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.97
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.97
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.97
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.97
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.97
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.96
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.96
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.96
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.96
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.96
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.96
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.96
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.96
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.96
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.96
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.96
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.96
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.95
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.94
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.94
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.94
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.94
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.94
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.93
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.93
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.93
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.92
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.92
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.92
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.92
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.9
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.9
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.9
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.9
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.89
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.89
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.88
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.88
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.88
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.88
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.88
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.87
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.86
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.85
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.85
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.85
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.84
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.84
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.83
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.83
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.76
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.73

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=9.6e-67  Score=528.06  Aligned_cols=398  Identities=31%  Similarity=0.412  Sum_probs=375.9

Q ss_pred             CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHH
Q psy11819        148 TVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPL  227 (651)
Q Consensus       148 ~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L  227 (651)
                      ..++..+..|+||||+|+..|+.++|++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+..|.|||
T Consensus         5 ~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L   84 (437)
T 1n11_A            5 ISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPL   84 (437)
T ss_dssp             ----------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHH
T ss_pred             CCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHH
Confidence            45567888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Q psy11819        228 MWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVD  307 (651)
Q Consensus       228 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~  307 (651)
                      |+|+..|+.+++++|+++|++++..+..+.|||++|+..|+.+++++|++.+.+....+. .|.|||++|+..|+.++++
T Consensus        85 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~  163 (437)
T 1n11_A           85 HCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTK-KGFTPLHVAAKYGKVRVAE  163 (437)
T ss_dssp             HHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHTTCHHHHH
T ss_pred             HHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCC-CCCCHHHHHHHcCCHHHHH
Confidence            999999999999999999999999999999999999999999999999999998887776 6999999999999999999


Q ss_pred             HHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHH
Q psy11819        308 ILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLF  387 (651)
Q Consensus       308 ~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (651)
                      +|+++|++++..+                                                                   
T Consensus       164 ~Ll~~g~~~~~~~-------------------------------------------------------------------  176 (437)
T 1n11_A          164 LLLERDAHPNAAG-------------------------------------------------------------------  176 (437)
T ss_dssp             HHHHTTCCTTCCC-------------------------------------------------------------------
T ss_pred             HHHhCCCCCCCCC-------------------------------------------------------------------
Confidence            9999999877543                                                                   


Q ss_pred             HHHhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHH
Q psy11819        388 VLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALT  467 (651)
Q Consensus       388 ~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~  467 (651)
                            ..|.|||+.|+..|+.+++++|+++|.+++..+..+.|||+.|+..++.+++++|+++|++++..+..|.||||
T Consensus       177 ------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~  250 (437)
T 1n11_A          177 ------KNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLH  250 (437)
T ss_dssp             ------SSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred             ------CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence                  55889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q psy11819        468 IACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLL  547 (651)
Q Consensus       468 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L  547 (651)
                      +|+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|
T Consensus       251 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~L  330 (437)
T 1n11_A          251 LAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFL  330 (437)
T ss_dssp             HHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHH
T ss_pred             HHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCC
Q psy11819        548 LTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKN  619 (651)
Q Consensus       548 l~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~  619 (651)
                      +++|++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|.|||++|.+.|+.+++++|......
T Consensus       331 l~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~~  402 (437)
T 1n11_A          331 LQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDE  402 (437)
T ss_dssp             HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHCCC
T ss_pred             HhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcccc
Confidence            999999999999999999999999999999999999999999999999999999999999999999766544

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=3.6e-66  Score=523.88  Aligned_cols=394  Identities=29%  Similarity=0.374  Sum_probs=368.7

Q ss_pred             cCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCc
Q psy11819        179 RGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHIS  258 (651)
Q Consensus       179 ~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t  258 (651)
                      .|++++..+..|.||||+|+..|+.+++++|++.|++++..+..+.||||+|+..|+.+++++|+++|++++..+..+.|
T Consensus         3 ~g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t   82 (437)
T 1n11_A            3 PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQT   82 (437)
T ss_dssp             ------------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCC
T ss_pred             CCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCC
Confidence            57788889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcChHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccccccccchHHHHhchhcC
Q psy11819        259 SLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSE  338 (651)
Q Consensus       259 ~L~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (651)
                      ||++|+..|+.+++++|+++|++++..+. .|.|||++|+..|+.+++++|++.+.+.+..+                  
T Consensus        83 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~------------------  143 (437)
T 1n11_A           83 PLHCAARIGHTNMVKLLLENNANPNLATT-AGHTPLHIAAREGHVETVLALLEKEASQACMT------------------  143 (437)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC------------------
T ss_pred             HHHHHHHCCCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCC------------------
Confidence            99999999999999999999999988877 79999999999999999999999988765432                  


Q ss_pred             CCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHHcCCHHHHHHHHHc
Q psy11819        339 PGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKA  418 (651)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~  418 (651)
                                                                             ..|.|||+.|+..|+.+++++|+++
T Consensus       144 -------------------------------------------------------~~g~t~L~~A~~~g~~~~v~~Ll~~  168 (437)
T 1n11_A          144 -------------------------------------------------------KKGFTPLHVAAKYGKVRVAELLLER  168 (437)
T ss_dssp             -------------------------------------------------------TTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             -------------------------------------------------------CCCCCHHHHHHHcCCHHHHHHHHhC
Confidence                                                                   4578999999999999999999999


Q ss_pred             CCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcH
Q psy11819        419 GANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSN  498 (651)
Q Consensus       419 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~  498 (651)
                      |++++..+..+.|||+.|+..++.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||
T Consensus       169 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~  248 (437)
T 1n11_A          169 DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTP  248 (437)
T ss_dssp             TCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred             CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHH
Q psy11819        499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQ  578 (651)
Q Consensus       499 l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~  578 (651)
                      ||.|+..|+.+++++|++++++++..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.++|+
T Consensus       249 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~  328 (437)
T 1n11_A          249 LHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVK  328 (437)
T ss_dssp             HHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHH
T ss_pred             HHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccccchhhhhcc
Q psy11819        579 MLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQEC  649 (651)
Q Consensus       579 ~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~  649 (651)
                      +|+++|++++.+|..|.||||+|+..|+.+++++|+++|++   ++.+|..|+||+++|.+.++..+++.+
T Consensus       329 ~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~---~~~~~~~g~t~l~~A~~~g~~~~~~~l  396 (437)
T 1n11_A          329 FLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGAS---PNEVSSDGTTPLAIAKRLGYISVTDVL  396 (437)
T ss_dssp             HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---SCCCCSSSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCC---CCCCCCCCCCHHHHHHHcCcHHHHHHH
Confidence            99999999999999999999999999999999999999998   778999999999999999987776543

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=100.00  E-value=8.7e-46  Score=360.39  Aligned_cols=303  Identities=30%  Similarity=0.421  Sum_probs=202.2

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcC
Q psy11819        156 NGGTALMFAAQKGKLSFVRELVTRGADVNAEDN-DNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKG  234 (651)
Q Consensus       156 ~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~  234 (651)
                      .|.|+||.||+.|++++|++|++.|++++..+. .|+||||+|+..|+.+++++|+++|++++..+..+.++++.++..+
T Consensus        24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~  103 (337)
T 4g8k_A           24 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAG  103 (337)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcc
Confidence            467899999999999999999999999988765 4899999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q psy11819        235 HTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGA  314 (651)
Q Consensus       235 ~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~  314 (651)
                      ...++..+++.+++++..+..|.||+++|+..|+.+++++|+++|++++..... ...                      
T Consensus       104 ~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~-~~~----------------------  160 (337)
T 4g8k_A          104 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKT-KED----------------------  160 (337)
T ss_dssp             CHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCC-C------------------------
T ss_pred             cchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhcc-ccc----------------------
Confidence            999999998888888888777777777777777777777777766665433220 000                      


Q ss_pred             CcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcC
Q psy11819        315 NVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLS  394 (651)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (651)
                       .                                                                         ...+.
T Consensus       161 -~-------------------------------------------------------------------------~~~~~  166 (337)
T 4g8k_A          161 -Q-------------------------------------------------------------------------ERLRK  166 (337)
T ss_dssp             -----------------------------------------------------------------------------CTT
T ss_pred             -c-------------------------------------------------------------------------ccccC
Confidence             0                                                                         00113


Q ss_pred             CCChHHHHHHHcCCHHHHHHHHH-cCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q psy11819        395 YGTTPLVWACRKGHVEIVDILLK-AGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDG  473 (651)
Q Consensus       395 ~~~t~l~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~  473 (651)
                      .|.||||.|+..|+.+++++|++ .|++++..+..+.++++.++..+..                             .+
T Consensus       167 ~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~-----------------------------~~  217 (337)
T 4g8k_A          167 GGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD-----------------------------SD  217 (337)
T ss_dssp             CSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCT-----------------------------TT
T ss_pred             CCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCc-----------------------------cc
Confidence            35667777777776666666664 3566655555555555544322110                             00


Q ss_pred             cHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy11819        474 YYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKK-YVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP  552 (651)
Q Consensus       474 ~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~  552 (651)
                      ...++++|+++|++++.++..|.||||+|+..|+.+++++|++. |++++.+|.+|.||||+|++.|+.++|++|+++|+
T Consensus       218 ~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA  297 (337)
T 4g8k_A          218 VEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA  297 (337)
T ss_dssp             HHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence            12345555555555555555555555555555555555555553 45555566666666666666666666666666666


Q ss_pred             CccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcc
Q psy11819        553 DLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITA  589 (651)
Q Consensus       553 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~  589 (651)
                      ++|..     +|||+|+.+|+.++|++|+++||+++.
T Consensus       298 d~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA~~d~  329 (337)
T 4g8k_A          298 STDCG-----DLVMTARRNYDHSLVKVLLSHGAKEDF  329 (337)
T ss_dssp             SSTTC-----CHHHHHHHTTCHHHHHHHHHTTCCC--
T ss_pred             CCCCC-----CHHHHHHHcCCHHHHHHHHHCcCCCCC
Confidence            55433     366666666666666666666666553

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=100.00  E-value=1e-44  Score=352.77  Aligned_cols=297  Identities=29%  Similarity=0.395  Sum_probs=232.9

Q ss_pred             CCchHHHHHHHcCCHHHHHHHHhcCCCCCCcCC-CCCcHHHHHHhcChHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHc
Q psy11819        222 GGWSPLMWASYKGHTDTVALLLDKNADVNAHGN-YHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRK  300 (651)
Q Consensus       222 ~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~~t~L~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~  300 (651)
                      ++.|+|+.|+.+|+.++|++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++..+. .+.++++.++..
T Consensus        24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~~~~~~~~~~~  102 (337)
T 4g8k_A           24 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKK-NGATPFILAAIA  102 (337)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHH
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhcc-CCCchhHHHHhc
Confidence            356777777777777777777777777776654 366777777777777777777777766666655 566666666666


Q ss_pred             CCHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCCCCcc
Q psy11819        301 GHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTF  380 (651)
Q Consensus       301 ~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (651)
                      +...++..+++.+.+++..+                                                            
T Consensus       103 ~~~~~~~~~~~~~~~~~~~d------------------------------------------------------------  122 (337)
T 4g8k_A          103 GSVKLLKLFLSKGADVNECD------------------------------------------------------------  122 (337)
T ss_dssp             TCHHHHHHHHTTTCCTTCBC------------------------------------------------------------
T ss_pred             ccchhhHHhhhccchhhhhc------------------------------------------------------------
Confidence            66666666666666554332                                                            


Q ss_pred             chhhhHHHHHhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCC
Q psy11819        381 TFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDK  460 (651)
Q Consensus       381 ~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~  460 (651)
                                   ..|.||++.|+..|+.+++++|+++|++++......                       .+....+.
T Consensus       123 -------------~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~-----------------------~~~~~~~~  166 (337)
T 4g8k_A          123 -------------FYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTK-----------------------EDQERLRK  166 (337)
T ss_dssp             -------------TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC----------------------------CTT
T ss_pred             -------------cCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccc-----------------------cccccccC
Confidence                         345566666666666666666666666655433211                       11233456


Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHh-CCCCCcccCCCCCcHHHHHHhcCc----HHHHHHHHhcCCCCCCCCCCCCCHHHHH
Q psy11819        461 DGCTALTIACKDGYYEIAVLLLN-SGAYINIQDRSGDSNLIHAVKGGH----RGIVEALLKKYVDVDIPGKERKTAVYTA  535 (651)
Q Consensus       461 ~g~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~l~~A~~~~~----~~~v~~Ll~~~~~~~~~~~~g~t~l~~A  535 (651)
                      .|.||||+|+..|+.+++++|++ .|++++..+..|.|+++.++..+.    ..++++|+++|++++.++..|.||||+|
T Consensus       167 ~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a  246 (337)
T 4g8k_A          167 GGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILA  246 (337)
T ss_dssp             CSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHH
T ss_pred             CCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence            79999999999999999999996 599999999999999998776433    4688999999999999999999999999


Q ss_pred             HHcCCHHHHHHHHhc-CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHH
Q psy11819        536 VEKGNVPILKLLLTA-NPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI  614 (651)
Q Consensus       536 ~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll  614 (651)
                      +..|+.+++++|++. |++++.+|..|+||||+|+..|+.++|++|+++|++++.     .+|||+|+.+++.++|++|+
T Consensus       247 ~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~-----~~~L~~A~~~~~~~iv~~Ll  321 (337)
T 4g8k_A          247 VEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC-----GDLVMTARRNYDHSLVKVLL  321 (337)
T ss_dssp             HHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT-----CCHHHHHHHTTCHHHHHHHH
T ss_pred             HHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----CCHHHHHHHcCCHHHHHHHH
Confidence            999999999999986 899999999999999999999999999999999999875     46999999999999999999


Q ss_pred             hCCCCc
Q psy11819        615 RNPKNN  620 (651)
Q Consensus       615 ~~~~~~  620 (651)
                      ++|+++
T Consensus       322 ~~GA~~  327 (337)
T 4g8k_A          322 SHGAKE  327 (337)
T ss_dssp             HTTCCC
T ss_pred             HCcCCC
Confidence            999984

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=7.6e-45  Score=357.44  Aligned_cols=325  Identities=26%  Similarity=0.261  Sum_probs=211.8

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHc
Q psy11819        155 DNGGTALMFAAQKGKLSFVRELVTR-GADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYK  233 (651)
Q Consensus       155 ~~~~t~l~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~  233 (651)
                      ..+.++||.|+..|+.+.|++|+.. +.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..
T Consensus        22 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~  101 (351)
T 3utm_A           22 EYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSY  101 (351)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred             cccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHC
Confidence            3456788888888888888887764 677788888888888888888888888888888888888888888888888888


Q ss_pred             CCHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q psy11819        234 GHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAG  313 (651)
Q Consensus       234 ~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~  313 (651)
                      |+.+++++|+++|++++..+..+.|||++|+..|+.+++++|+++|.+++..+. .+.+|+++++..+..+.+.+...  
T Consensus       102 g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~~~l~~a~~~~~~~~~~~~~~--  178 (351)
T 3utm_A          102 GHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNC-HGKSAVDMAPTPELRERLTYEFK--  178 (351)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHCSSHHHHHHHHHHHH--
T ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCcchHHHhhhhhHHHHHhhhc--
Confidence            888888888888888888888888888888888888888888888777776665 57777777766655555554442  


Q ss_pred             CCcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhc
Q psy11819        314 ANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHL  393 (651)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (651)
                                                                                                      
T Consensus       179 --------------------------------------------------------------------------------  178 (351)
T 3utm_A          179 --------------------------------------------------------------------------------  178 (351)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc-
Q psy11819        394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKD-  472 (651)
Q Consensus       394 ~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~-  472 (651)
                         ..++..++..+..+.++.++..+.....                                 .+..|.||||+|+.. 
T Consensus       179 ---~~~~~~~~~~~~~~~~~~~l~~~~~~~~---------------------------------~~~~~~t~L~~A~~~~  222 (351)
T 3utm_A          179 ---GHSLLQAAREADLAKVKKTLALEIINFK---------------------------------QPQSHETALHCAVASL  222 (351)
T ss_dssp             ---HHHHHHHHHTTCHHHHHHHTTTCCTTCC---------------------------------CTTTCCCHHHHHHHCC
T ss_pred             ---ccHHHHHHHhccHHHHHHHHHhhccccc---------------------------------CCCCCCCHHHHHHHHh
Confidence               1445555666666666666554332222                                 334455555555555 


Q ss_pred             --CcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Q psy11819        473 --GYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTA  550 (651)
Q Consensus       473 --~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  550 (651)
                        +..+++++|+++|++++.++..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++
T Consensus       223 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~  302 (351)
T 3utm_A          223 HPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSY  302 (351)
T ss_dssp             STTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred             CccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence              335556666666666666666666666666666666666666666666666666666666666666666666666666


Q ss_pred             CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Q psy11819        551 NPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRAR  605 (651)
Q Consensus       551 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~  605 (651)
                      |++++..|..|+||+++|    +.+++++|.+.+..   ....+.+++..|++.|
T Consensus       303 gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~---~~~~~~~~l~~A~~~g  350 (351)
T 3utm_A          303 GSDPSIISLQGFTAAQMG----NEAVQQILSESTPM---RTSDVDYRLLEASKAG  350 (351)
T ss_dssp             TCCTTCCCTTSCCHHHHS----CHHHHHHHHHC----------------------
T ss_pred             CCCCCCcCCCCCChhhhh----hHHHHHHHHhcccc---ccCcceeehhhhhccC
Confidence            666666666666666665    44555666554332   2233455666666554

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=6.7e-45  Score=357.81  Aligned_cols=225  Identities=17%  Similarity=0.191  Sum_probs=182.3

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCc
Q psy11819        395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGY  474 (651)
Q Consensus       395 ~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~  474 (651)
                      .|.|||+.|+..|+.+++++|+++|++++..+..+.++++.++..+..+.+.+....            +++..++..+.
T Consensus       123 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~------------~~~~~~~~~~~  190 (351)
T 3utm_A          123 WQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKG------------HSLLQAAREAD  190 (351)
T ss_dssp             TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHH------------HHHHHHHHTTC
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcc------------cHHHHHHHhcc
Confidence            356777777777777777777777777777777788888888777777777766542            36788888999


Q ss_pred             HHHHHHHHhCCCCCcccCCCCCcHHHHHHhc---CcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy11819        475 YEIAVLLLNSGAYINIQDRSGDSNLIHAVKG---GHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN  551 (651)
Q Consensus       475 ~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~  551 (651)
                      .+.++.++..+......+..|.||||.|+..   +..+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|
T Consensus       191 ~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g  270 (351)
T 3utm_A          191 LAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHG  270 (351)
T ss_dssp             HHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred             HHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence            9999999888776667788899999999999   6689999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCC
Q psy11819        552 PDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGE  631 (651)
Q Consensus       552 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~  631 (651)
                      ++++..|..|+||||+|+..|+.++|++|+++|++++..|..|.||+++|    ..+++++|.+....      ....+.
T Consensus       271 a~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~------~~~~~~  340 (351)
T 3utm_A          271 AKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPM------RTSDVD  340 (351)
T ss_dssp             CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC---------------
T ss_pred             CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhcccc------ccCcce
Confidence            99999999999999999999999999999999999999999999999998    77899999999866      566788


Q ss_pred             Cccccccccc
Q psy11819        632 TPYSIDMNNQ  641 (651)
Q Consensus       632 t~l~~a~~~~  641 (651)
                      +++..|++.|
T Consensus       341 ~~l~~A~~~g  350 (351)
T 3utm_A          341 YRLLEASKAG  350 (351)
T ss_dssp             ----------
T ss_pred             eehhhhhccC
Confidence            9999998876

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=5.7e-43  Score=333.22  Aligned_cols=264  Identities=28%  Similarity=0.397  Sum_probs=247.3

Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHH
Q psy11819        289 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEM  368 (651)
Q Consensus       289 ~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (651)
                      .|.++|+.|+..|+.+++++|++.|.+++...                                                
T Consensus         4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~------------------------------------------------   35 (285)
T 1wdy_A            4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQE------------------------------------------------   35 (285)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCC------------------------------------------------
T ss_pred             ccchHHHHHHHcCCHHHHHHHHHcCCCccccc------------------------------------------------
Confidence            36689999999999999999999988876431                                                


Q ss_pred             HHHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHH
Q psy11819        369 KHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELL  448 (651)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L  448 (651)
                                              +..|.||||.|+..|+.+++++|+++|++++..+..+.||||+|+..++.+++++|
T Consensus        36 ------------------------~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L   91 (285)
T 1wdy_A           36 ------------------------EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLF   91 (285)
T ss_dssp             ------------------------TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred             ------------------------CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHH
Confidence                                    24478999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCccc----------CCCCCcHHHHHHhcCcHHHHHHHHhc-
Q psy11819        449 LEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQ----------DRSGDSNLIHAVKGGHRGIVEALLKK-  517 (651)
Q Consensus       449 l~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~t~l~~A~~~~~~~~v~~Ll~~-  517 (651)
                      +++|++++..+..|.||||.|+..|+.+++++|+++|++++..          +..|.|||+.|+..|+.+++++|+++ 
T Consensus        92 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~  171 (285)
T 1wdy_A           92 LSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEM  171 (285)
T ss_dssp             HHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTS
T ss_pred             HHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999887          77899999999999999999999997 


Q ss_pred             CCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCcccCC
Q psy11819        518 YVDVDIPGKERKTAVYTAVEKGN----VPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLID-KKAKITAVDK  592 (651)
Q Consensus       518 ~~~~~~~~~~g~t~l~~A~~~~~----~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~  592 (651)
                      |.+++..+..|.||||+|+..++    .+++++|++.|++++.++..|+||||+|+..|+.+++++|++ .|++++.+|.
T Consensus       172 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~  251 (285)
T 1wdy_A          172 GADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS  251 (285)
T ss_dssp             CCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCT
T ss_pred             CCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCC
Confidence            99999999999999999999999    999999999999999999999999999999999999999999 8999999999


Q ss_pred             CCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCC
Q psy11819        593 RGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPN  627 (651)
Q Consensus       593 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~  627 (651)
                      .|.||||+|+..++.+++++|+++|++   ++.+|
T Consensus       252 ~g~t~l~~A~~~~~~~i~~~Ll~~Ga~---~~~~d  283 (285)
T 1wdy_A          252 DGKTALLLAVELKLKKIAELLCKRGAS---TDCGD  283 (285)
T ss_dssp             TSCCHHHHHHHTTCHHHHHHHHHHSSC---SCCSS
T ss_pred             CCCcHHHHHHHcCcHHHHHHHHHcCCC---CCccc
Confidence            999999999999999999999999998   44454

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=1.6e-42  Score=330.12  Aligned_cols=197  Identities=30%  Similarity=0.450  Sum_probs=165.2

Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCC----------CCCCCcH
Q psy11819        396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNAL----------DKDGCTA  465 (651)
Q Consensus       396 ~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~----------~~~g~t~  465 (651)
                      |.|||+.|+..|+.+++++|+++|++++..+..+.|||+.|+..++.+++++|+++|++++..          +..|.||
T Consensus        72 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~  151 (285)
T 1wdy_A           72 GATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATA  151 (285)
T ss_dssp             CCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCH
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcH
Confidence            455555555555555555555555555555555666666666666666666666666555554          6789999


Q ss_pred             HHHHHHcCcHHHHHHHHhC-CCCCcccCCCCCcHHHHHHhcCc----HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC
Q psy11819        466 LTIACKDGYYEIAVLLLNS-GAYINIQDRSGDSNLIHAVKGGH----RGIVEALLKKYVDVDIPGKERKTAVYTAVEKGN  540 (651)
Q Consensus       466 l~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~l~~A~~~~~----~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~  540 (651)
                      ||.|+..|+.+++++|++. |++++..+..|.||||.|+..++    .+++++|+++|++++.++..|.||||+|+..|+
T Consensus       152 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~  231 (285)
T 1wdy_A          152 LMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKH  231 (285)
T ss_dssp             HHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTC
T ss_pred             HHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence            9999999999999999987 99999999999999999999999    899999999999999999999999999999999


Q ss_pred             HHHHHHHHh-cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Q psy11819        541 VPILKLLLT-ANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDK  592 (651)
Q Consensus       541 ~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~  592 (651)
                      .+++++|++ .|++++..|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus       232 ~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~  284 (285)
T 1wdy_A          232 LGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL  284 (285)
T ss_dssp             HHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred             HHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence            999999999 8999999999999999999999999999999999999998874

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=1.1e-43  Score=348.97  Aligned_cols=208  Identities=26%  Similarity=0.357  Sum_probs=184.3

Q ss_pred             HHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCC---CCC
Q psy11819        412 VDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSG---AYI  488 (651)
Q Consensus       412 v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g---~~~  488 (651)
                      ++.|++.|++++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..|+.+++++|++++   +++
T Consensus       149 ~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~  228 (373)
T 2fo1_E          149 AKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI  228 (373)
T ss_dssp             HHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT
T ss_pred             HHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh
Confidence            35566788888888888888888888888888888888888888888888888888888888888888888887   788


Q ss_pred             cccCCCCCcHHHHHHhcC---cHHHHHHHHhcCCCCCC--------CCCCCCCHHHHHHHcCCHHHHHHHHhcC-CCccc
Q psy11819        489 NIQDRSGDSNLIHAVKGG---HRGIVEALLKKYVDVDI--------PGKERKTAVYTAVEKGNVPILKLLLTAN-PDLEI  556 (651)
Q Consensus       489 ~~~~~~~~t~l~~A~~~~---~~~~v~~Ll~~~~~~~~--------~~~~g~t~l~~A~~~~~~~~v~~Ll~~~-~~~~~  556 (651)
                      +..+..|.||||+|+..+   +.+++++|+++|++++.        .+..|.||||+|+..|+.+++++|++.+ ++++.
T Consensus       229 ~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~  308 (373)
T 2fo1_E          229 EELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDK  308 (373)
T ss_dssp             SCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTC
T ss_pred             hhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccC
Confidence            888888888888888887   78888888888888775        5678999999999999999999999886 99999


Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCC
Q psy11819        557 ATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKN  619 (651)
Q Consensus       557 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~  619 (651)
                      .|..|+||||+|+..|+.++|++|+++|++++.+|..|.|||++|+.+|+.+++++|++++++
T Consensus       309 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~  371 (373)
T 2fo1_E          309 QDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE  371 (373)
T ss_dssp             CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence            999999999999999999999999999999999999999999999999999999999999875

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=1.8e-42  Score=340.28  Aligned_cols=316  Identities=18%  Similarity=0.173  Sum_probs=208.4

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcCCHHHH
Q psy11819        160 ALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTV  239 (651)
Q Consensus       160 ~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~v  239 (651)
                      +|..|+..|+.+.++.+++....+.    .-.+++.-+...|+++++++++..     ..+..|.||||+|+..+ .+++
T Consensus        40 ~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~g~t~L~~Aa~~~-~~~~  109 (373)
T 2fo1_E           40 SLLEASYDGYIKRQRNELQHYSLYP----NPQGYGNGNDFLGDFNHTNLQIPT-----EPEPESPIKLHTEAAGS-YAIT  109 (373)
T ss_dssp             ---------------------------------------------------------------CCCHHHHHHHSS-SCCC
T ss_pred             ccccccCCccccchhhhhhhhcccc----CccccCCCCCcccccccccccccc-----CCCCCCccHHHHHhcCC-chHH
Confidence            5666666777777777766544332    112345556666777777776644     24556777777777744 3566


Q ss_pred             HHHHhcCCCCCCcC-CCCCcHHHHHHhcChHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Q psy11819        240 ALLLDKNADVNAHG-NYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDV  318 (651)
Q Consensus       240 ~~Ll~~~~~~~~~~-~~~~t~L~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~  318 (651)
                      ++|+.  .+++..+ ..|.||||+|+..|+.+++++|+..                          .++.|++.|++++.
T Consensus       110 ~~L~~--~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~--------------------------~~~~ll~~ga~vn~  161 (373)
T 2fo1_E          110 EPITR--ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVH--------------------------EAKECIAAGADVNA  161 (373)
T ss_dssp             SCCST--TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHH--------------------------HHHHHHHTCCCTTC
T ss_pred             HHhcc--ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHH--------------------------HHHHHHhcCCCCcC
Confidence            66543  3444444 4566666666666666655555421                          23445566766654


Q ss_pred             ccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCCh
Q psy11819        319 AGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTT  398 (651)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t  398 (651)
                      .+                                                                         ..|.|
T Consensus       162 ~d-------------------------------------------------------------------------~~g~T  168 (373)
T 2fo1_E          162 MD-------------------------------------------------------------------------CDENT  168 (373)
T ss_dssp             CC-------------------------------------------------------------------------TTSCC
T ss_pred             CC-------------------------------------------------------------------------CCCCC
Confidence            32                                                                         44677


Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcC---CCCCCCCCCCCcHHHHHHHcC--
Q psy11819        399 PLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYK---PNVNALDKDGCTALTIACKDG--  473 (651)
Q Consensus       399 ~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~---~~~~~~~~~g~t~l~~A~~~~--  473 (651)
                      |||.|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++++   .+++..+..|.||||+|+..+  
T Consensus       169 pL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~  248 (373)
T 2fo1_E          169 PLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGR  248 (373)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCST
T ss_pred             HHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCc
Confidence            888888888888888888888888877888888888888888888888888877   678888888888888888887  


Q ss_pred             -cHHHHHHHHhCCCCCcc--------cCCCCCcHHHHHHhcCcHHHHHHHHhcC-CCCCCCCCCCCCHHHHHHHcCCHHH
Q psy11819        474 -YYEIAVLLLNSGAYINI--------QDRSGDSNLIHAVKGGHRGIVEALLKKY-VDVDIPGKERKTAVYTAVEKGNVPI  543 (651)
Q Consensus       474 -~~~~~~~Ll~~g~~~~~--------~~~~~~t~l~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~g~t~l~~A~~~~~~~~  543 (651)
                       +.+++++|+++|++++.        .+..|.||||+|+..|+.+++++|++++ .+++..|..|.||||+|+..|+.++
T Consensus       249 ~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~i  328 (373)
T 2fo1_E          249 DQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEV  328 (373)
T ss_dssp             THHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred             chHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHH
Confidence             78888888888888875        5678999999999999999999999876 9999999999999999999999999


Q ss_pred             HHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy11819        544 LKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAK  586 (651)
Q Consensus       544 v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  586 (651)
                      +++|+++|++++..|..|+|||++|+.+|+.++|++|+++|++
T Consensus       329 v~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~  371 (373)
T 2fo1_E          329 VMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE  371 (373)
T ss_dssp             HHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred             HHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence            9999999999999999999999999999999999999999876

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=3.4e-41  Score=318.16  Aligned_cols=243  Identities=19%  Similarity=0.241  Sum_probs=206.2

Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcC-----------CCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCC
Q psy11819        394 SYGTTPLVWACRKGHVEIVDILLKAG-----------ANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDG  462 (651)
Q Consensus       394 ~~~~t~l~~A~~~~~~~~v~~Ll~~~-----------~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g  462 (651)
                      ..+.|++|+|+..|+.+.+..++..+           ...+..+..|+||||.|+..|+.+++++|++.|++++..+..|
T Consensus        13 ~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g   92 (285)
T 3d9h_A           13 GLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADH   92 (285)
T ss_dssp             -----------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTC
T ss_pred             hHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence            55889999999999987777765432           2245678899999999999999999999999999999999999


Q ss_pred             CcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHH
Q psy11819        463 CTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVP  542 (651)
Q Consensus       463 ~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~  542 (651)
                      .||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|++++..+ +|.||||+|+..|+.+
T Consensus        93 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~  171 (285)
T 3d9h_A           93 VSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVE  171 (285)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHH
T ss_pred             CCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHH
Confidence            999999999999999999999999999999999999999999999999999999999988644 5999999999999999


Q ss_pred             HHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCccc
Q psy11819        543 ILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNIL  622 (651)
Q Consensus       543 ~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~  622 (651)
                      ++++|++.|++++..|..|.||||+|+..|+.++|++|++.|++++. |..|.||||+|+..++.+++++|+++|.+   
T Consensus       172 ~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad---  247 (285)
T 3d9h_A          172 CVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGAD---  247 (285)
T ss_dssp             HHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCC---
T ss_pred             HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCC---
Confidence            99999999999999999999999999999999999999999999995 89999999999999999999999999998   


Q ss_pred             ccCCCCCCCCccccccccc
Q psy11819        623 LYRPNKAGETPYSIDMNNQ  641 (651)
Q Consensus       623 ~~~~~~~g~t~l~~a~~~~  641 (651)
                      ++.+|..|+||||+|.++.
T Consensus       248 ~~~~d~~g~t~l~~A~~~~  266 (285)
T 3d9h_A          248 TQAKNAEGKRPVELVPPES  266 (285)
T ss_dssp             TTCCCTTSCCGGGGSCTTS
T ss_pred             CCCcCCCCCCHHHHhcCcc
Confidence            7889999999999999543

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.3e-40  Score=314.17  Aligned_cols=222  Identities=25%  Similarity=0.316  Sum_probs=213.0

Q ss_pred             hcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q psy11819        392 HLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACK  471 (651)
Q Consensus       392 ~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~  471 (651)
                      .+..|.||||.|+..|+.+++++|++.|++++..+..|+||||+|+..++.+++++|+++|++++..+..|.||||+|+.
T Consensus        55 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~  134 (285)
T 3d9h_A           55 DAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACV  134 (285)
T ss_dssp             SSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHH
T ss_pred             CCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence            34668999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy11819        472 DGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN  551 (651)
Q Consensus       472 ~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~  551 (651)
                      .|+.+++++|+++|++++..+ .|.||||.|+..|+.+++++|+++|.+++..+..|.||||+|+..|+.+++++|++.|
T Consensus       135 ~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g  213 (285)
T 3d9h_A          135 SGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESG  213 (285)
T ss_dssp             HTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTT
T ss_pred             cCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCC
Confidence            999999999999999988654 5999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCC
Q psy11819        552 PDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNP  617 (651)
Q Consensus       552 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~  617 (651)
                      ++++. +..|.||||+|+..++.+++++|+++|++++.+|..|+|||++|+  ++.+++++|++++
T Consensus       214 a~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~  276 (285)
T 3d9h_A          214 ADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLERE  276 (285)
T ss_dssp             CCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC
T ss_pred             CCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhh
Confidence            99995 889999999999999999999999999999999999999999999  5679999999984

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=9e-41  Score=310.14  Aligned_cols=231  Identities=22%  Similarity=0.248  Sum_probs=183.5

Q ss_pred             HHhhcCCCChHHHHHHHcC-------------CHHHHHHHHHcCCCCCC-cCcCCChHHHHHHhcCcHHHHHHHHhcCCC
Q psy11819        389 LVMHLSYGTTPLVWACRKG-------------HVEIVDILLKAGANVDV-AGLYCWTPLLVATLGNFTEVVELLLEYKPN  454 (651)
Q Consensus       389 ~~~~~~~~~t~l~~A~~~~-------------~~~~v~~Ll~~~~~~~~-~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~  454 (651)
                      ++.++..|.||||.|+..|             +.+++++|++.|.+++. .+..|+||||+|+..++.+++++|+++|++
T Consensus         3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~   82 (253)
T 1yyh_A            3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD   82 (253)
T ss_dssp             -------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence            3456788999999999977             89999999999998865 478999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCC-CCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHH
Q psy11819        455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGA-YINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVY  533 (651)
Q Consensus       455 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~  533 (651)
                      ++..+..|.||||+|+..|+.+++++|+++|+ +++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||
T Consensus        83 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~  162 (253)
T 1yyh_A           83 ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALH  162 (253)
T ss_dssp             TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHH
T ss_pred             CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence            99999999999999999999999999999987 89999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHH
Q psy11819        534 TAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVF  613 (651)
Q Consensus       534 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~L  613 (651)
                      +|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|+.+|+.+++++|
T Consensus       163 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l  242 (253)
T 1yyh_A          163 WAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL  242 (253)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhCCCC
Q psy11819        614 IRNPKN  619 (651)
Q Consensus       614 l~~~~~  619 (651)
                      ......
T Consensus       243 ~~~~~~  248 (253)
T 1yyh_A          243 DLEHHH  248 (253)
T ss_dssp             HC----
T ss_pred             HHHhhh
Confidence            987654

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=5.7e-41  Score=311.49  Aligned_cols=226  Identities=23%  Similarity=0.297  Sum_probs=183.4

Q ss_pred             CCCCcCcCCChHHHHHHhcC-------------cHHHHHHHHhcCCCCCC-CCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q psy11819        421 NVDVAGLYCWTPLLVATLGN-------------FTEVVELLLEYKPNVNA-LDKDGCTALTIACKDGYYEIAVLLLNSGA  486 (651)
Q Consensus       421 ~~~~~~~~~~t~l~~a~~~~-------------~~~~~~~Ll~~~~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~  486 (651)
                      +++.++..|+||||+|+..|             +.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|+
T Consensus         2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~   81 (253)
T 1yyh_A            2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA   81 (253)
T ss_dssp             --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence            67888999999999999977             89999999999999865 48899999999999999999999999999


Q ss_pred             CCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHH
Q psy11819        487 YINIQDRSGDSNLIHAVKGGHRGIVEALLKKYV-DVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPL  565 (651)
Q Consensus       487 ~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L  565 (651)
                      +++..+..|.||||+|+..++.+++++|++++. +++..+..|.||||+|+..++.+++++|++.|++++..|..|+|||
T Consensus        82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L  161 (253)
T 1yyh_A           82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSAL  161 (253)
T ss_dssp             CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHH
T ss_pred             CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence            999999999999999999999999999999987 8999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccccchhh
Q psy11819        566 LKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSIL  645 (651)
Q Consensus       566 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~  645 (651)
                      |+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++   ++.+|..|+||+|+|.++++..+
T Consensus       162 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~tpl~~A~~~g~~~i  238 (253)
T 1yyh_A          162 HWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN---RDITDHMDRLPRDIAQERMHHDI  238 (253)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC---ccccccCCCCHHHHHHHcCCHHH
Confidence            999999999999999999999999999999999999999999999999999998   77899999999999999999998


Q ss_pred             hhcc
Q psy11819        646 AQEC  649 (651)
Q Consensus       646 ~~~~  649 (651)
                      ++.+
T Consensus       239 ~~~l  242 (253)
T 1yyh_A          239 VRLL  242 (253)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=100.00  E-value=1e-40  Score=328.44  Aligned_cols=255  Identities=16%  Similarity=0.173  Sum_probs=235.7

Q ss_pred             hhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q psy11819        391 MHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIAC  470 (651)
Q Consensus       391 ~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~  470 (651)
                      ..+..|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.  .+|.||||+|+
T Consensus        15 ~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~   92 (364)
T 3ljn_A           15 KSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLAV   92 (364)
T ss_dssp             -CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHHH
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHHH
Confidence            3456689999999999999999999999999999999999999999999999999999999996644  47999999999


Q ss_pred             HcCcHHHHHHHHhC----CCCCcc-----------------cCCCCCcHHHHHHhcC--cHHHHHHHHhcCCCCCCCCCC
Q psy11819        471 KDGYYEIAVLLLNS----GAYINI-----------------QDRSGDSNLIHAVKGG--HRGIVEALLKKYVDVDIPGKE  527 (651)
Q Consensus       471 ~~~~~~~~~~Ll~~----g~~~~~-----------------~~~~~~t~l~~A~~~~--~~~~v~~Ll~~~~~~~~~~~~  527 (651)
                      ..|+.+++++|+++    |++++.                 .+..|.||||+|+..|  +.+++++|+++|++++..+..
T Consensus        93 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~  172 (364)
T 3ljn_A           93 MANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKA  172 (364)
T ss_dssp             HTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTT
T ss_pred             HcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCC
Confidence            99999999999998    888877                 8889999999999999  999999999999999999999


Q ss_pred             CCCHHHHHHHcCCHHHHHHHHhcCCC-----ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q psy11819        528 RKTAVYTAVEKGNVPILKLLLTANPD-----LEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAM  602 (651)
Q Consensus       528 g~t~l~~A~~~~~~~~v~~Ll~~~~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~  602 (651)
                      |.||||+|+..|+.+++++|++.|++     ++..|..|+||||+|+..|+.++|++|+++|++++..|..|.||||+|+
T Consensus       173 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~  252 (364)
T 3ljn_A          173 DETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSV  252 (364)
T ss_dssp             SCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence            99999999999999999999999999     9999999999999999999999999999999999999999999999999


Q ss_pred             HcCChHHHHHHHhCCCCcc---------cccCCCCCCCCcccccccccchhhhh
Q psy11819        603 RARSKTIVEVFIRNPKNNI---------LLYRPNKAGETPYSIDMNNQKSILAQ  647 (651)
Q Consensus       603 ~~~~~~~~~~Ll~~~~~~~---------~~~~~~~~g~t~l~~a~~~~~~~~~~  647 (651)
                      ..|+.+++++|+++++...         .....+..|+||++.|...+....+.
T Consensus       253 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~  306 (364)
T 3ljn_A          253 RAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVL  306 (364)
T ss_dssp             HTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHH
T ss_pred             HhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHH
Confidence            9999999999999976421         12236788999999999998765544

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=1.1e-39  Score=300.55  Aligned_cols=221  Identities=26%  Similarity=0.359  Sum_probs=151.3

Q ss_pred             CCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHH
Q psy11819        421 NVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLI  500 (651)
Q Consensus       421 ~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~  500 (651)
                      +++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||+
T Consensus         3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~   82 (237)
T 3b7b_A            3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLH   82 (237)
T ss_dssp             CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHH
T ss_pred             CcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Confidence            44555666666666666666666666666666666666666666777776666666777776666666666666667777


Q ss_pred             HHHhcCcHHHHHHHHhcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHH
Q psy11819        501 HAVKGGHRGIVEALLKKY-VDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQM  579 (651)
Q Consensus       501 ~A~~~~~~~~v~~Ll~~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~  579 (651)
                      .|+..|+.+++++|++++ .+++..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++
T Consensus        83 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~  162 (237)
T 3b7b_A           83 LAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEI  162 (237)
T ss_dssp             HHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHH
T ss_pred             HHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHH
Confidence            777666777777776666 5666666666677777777777777777777766666666666777777777777777777


Q ss_pred             HHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccccchh
Q psy11819        580 LIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSI  644 (651)
Q Consensus       580 Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~  644 (651)
                      |++.|++++..|..|.||||+|+..++.+++++|+++|.+   ++.+|..|+||||+|..+++..
T Consensus       163 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad---~~~~d~~g~t~l~~A~~~~~~~  224 (237)
T 3b7b_A          163 LLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSD---VTLKNKEGETPLQCASLNSQVW  224 (237)
T ss_dssp             HHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC---TTCCCTTSCCHHHHSCTTCHHH
T ss_pred             HHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCC---CCccCCCCCCHHHHHHHHHHHH
Confidence            7777777666666677777777777777777777766666   5556666777777776666653

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=2.2e-39  Score=298.56  Aligned_cols=225  Identities=31%  Similarity=0.426  Sum_probs=216.8

Q ss_pred             hhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q psy11819        391 MHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIAC  470 (651)
Q Consensus       391 ~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~  470 (651)
                      .++..|.|||+.|+..|+.+++++|+++|++++..+..|.|||+.|+..++.+++++|+++|++++..+..|.||||+|+
T Consensus         6 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~   85 (237)
T 3b7b_A            6 MEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAA   85 (237)
T ss_dssp             CSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHH
T ss_pred             cccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Confidence            45677999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCcHHHHHHHHhCC-CCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Q psy11819        471 KDGYYEIAVLLLNSG-AYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLT  549 (651)
Q Consensus       471 ~~~~~~~~~~Ll~~g-~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~  549 (651)
                      ..|+.+++++|+++| .+++..+..|.|||+.|+..++.+++++|+++|++++..+..|.||||+|+..|+.+++++|++
T Consensus        86 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~  165 (237)
T 3b7b_A           86 KKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLA  165 (237)
T ss_dssp             HTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHT
T ss_pred             HcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence            999999999999998 8999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHh
Q psy11819        550 ANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIR  615 (651)
Q Consensus       550 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~  615 (651)
                      .|++++..|..|.||||+|+..++.+++++|+++|++++.+|+.|.||||+|+.+++.+.+..+++
T Consensus       166 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~  231 (237)
T 3b7b_A          166 AKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSK  231 (237)
T ss_dssp             TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred             cCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999876665554

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=2.7e-39  Score=299.02  Aligned_cols=222  Identities=23%  Similarity=0.255  Sum_probs=157.9

Q ss_pred             cCcCCChHHHHHHhcCcHHHHHHHHh----cCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHH
Q psy11819        425 AGLYCWTPLLVATLGNFTEVVELLLE----YKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLI  500 (651)
Q Consensus       425 ~~~~~~t~l~~a~~~~~~~~~~~Ll~----~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~  500 (651)
                      ++..|.||||.|+..|+.+++++|++    .+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||
T Consensus         5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~   84 (241)
T 1k1a_A            5 ADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAH   84 (241)
T ss_dssp             --CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence            44555666666666666666666654    56666666777777777777777777777777777777777777777777


Q ss_pred             HHHhcCcHHHHHHHHhcCC----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccC-CCCCcHHHHHHHcCCHH
Q psy11819        501 HAVKGGHRGIVEALLKKYV----DVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT-KDGDTPLLKAVKTRNLE  575 (651)
Q Consensus       501 ~A~~~~~~~~v~~Ll~~~~----~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~  575 (651)
                      +|+..++.+++++|++++.    +++..+..|.||||+|+..++.+++++|++.|++++..+ ..|.||||+|+..|+.+
T Consensus        85 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~  164 (241)
T 1k1a_A           85 LACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLS  164 (241)
T ss_dssp             HHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred             HHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHH
Confidence            7777777777777777665    666667777777777777777777777777777777666 66777777777777777


Q ss_pred             HHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccccchhhhhcc
Q psy11819        576 AIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQEC  649 (651)
Q Consensus       576 ~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~  649 (651)
                      ++++|+++|++++..|..|.||||+|+..++.+++++|+++|++   ++.+|..|+||||+|...++..+++.+
T Consensus       165 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~A~~~~~~~i~~~l  235 (241)
T 1k1a_A          165 MVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD---SSLKNCHNDTPLMVARSRRVIDILRGK  235 (241)
T ss_dssp             HHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCTTTTCSSHHHHHHHTC-
T ss_pred             HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCC---CCCcCCCCCCHHHHHHhcCcHHHHhhh
Confidence            77777777777777777777777777777777777777777776   556777777777777777777766653

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=6.2e-40  Score=303.35  Aligned_cols=229  Identities=26%  Similarity=0.321  Sum_probs=214.1

Q ss_pred             HhhcCCCChHHHHHHHcCCHHHHHHHHH----cCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcH
Q psy11819        390 VMHLSYGTTPLVWACRKGHVEIVDILLK----AGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTA  465 (651)
Q Consensus       390 ~~~~~~~~t~l~~A~~~~~~~~v~~Ll~----~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~  465 (651)
                      +..+..|.||||.|+..|+.+++++|++    .+.+++..+..|.||||+|+..++.+++++|+++|++++..+..|.||
T Consensus         3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~   82 (241)
T 1k1a_A            3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTA   82 (241)
T ss_dssp             ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence            3456889999999999999999999997    789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCcHHHHHHHHhCCC----CCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCC-CCCCCHHHHHHHcCC
Q psy11819        466 LTIACKDGYYEIAVLLLNSGA----YINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPG-KERKTAVYTAVEKGN  540 (651)
Q Consensus       466 l~~A~~~~~~~~~~~Ll~~g~----~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~g~t~l~~A~~~~~  540 (651)
                      ||+|+..|+.+++++|++.++    +++..+..|.||||.|+..++.+++++|+++|++++..+ ..|.||||+|+..|+
T Consensus        83 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~  162 (241)
T 1k1a_A           83 AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNS  162 (241)
T ss_dssp             HHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCC
Confidence            999999999999999999987    888999999999999999999999999999999999988 889999999999999


Q ss_pred             HHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCC
Q psy11819        541 VPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK  618 (651)
Q Consensus       541 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~  618 (651)
                      .+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.++++.|.+.++
T Consensus       163 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a  240 (241)
T 1k1a_A          163 LSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA  240 (241)
T ss_dssp             HHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred             HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999998764

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.1e-40  Score=308.15  Aligned_cols=226  Identities=21%  Similarity=0.268  Sum_probs=171.8

Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcCCC--------CCCcCcCCChHHHHHHhcCcH-HHHHHHHhcCCCCCCCCCCCCc
Q psy11819        394 SYGTTPLVWACRKGHVEIVDILLKAGAN--------VDVAGLYCWTPLLVATLGNFT-EVVELLLEYKPNVNALDKDGCT  464 (651)
Q Consensus       394 ~~~~t~l~~A~~~~~~~~v~~Ll~~~~~--------~~~~~~~~~t~l~~a~~~~~~-~~~~~Ll~~~~~~~~~~~~g~t  464 (651)
                      ..+.++|+.|+..|+.++|++|++.|.+        ++..+..+.+||+.|+..+.. .+++.|++.|++++..+.+|.|
T Consensus         9 ~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~T   88 (269)
T 4b93_B            9 YREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSS   88 (269)
T ss_dssp             CHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCC
T ss_pred             ccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCC
Confidence            4466899999999999999999998865        345567788999998876654 5788999999999999999999


Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Q psy11819        465 ALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPIL  544 (651)
Q Consensus       465 ~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v  544 (651)
                      |||+|+..|+.+++++|++.|++++..+..|.||++.|+..++.+++++|+++|++++.+|..|.||||+|+..|+.+++
T Consensus        89 pLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v  168 (269)
T 4b93_B           89 PLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELV  168 (269)
T ss_dssp             HHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGH
T ss_pred             HHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC-hHHHHHHHhCCCC
Q psy11819        545 KLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARS-KTIVEVFIRNPKN  619 (651)
Q Consensus       545 ~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-~~~~~~Ll~~~~~  619 (651)
                      ++|+++|+++|..+..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+++++ .+++++|...+..
T Consensus       169 ~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~  244 (269)
T 4b93_B          169 ALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVAS  244 (269)
T ss_dssp             HHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC-------
T ss_pred             HHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchh
Confidence            99999999999999999999999999999999999999999999999999999999987765 3444444444443

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=100.00  E-value=4.8e-39  Score=295.00  Aligned_cols=225  Identities=24%  Similarity=0.272  Sum_probs=206.2

Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcCCC-CCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q psy11819        394 SYGTTPLVWACRKGHVEIVDILLKAGAN-VDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKD  472 (651)
Q Consensus       394 ~~~~t~l~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~  472 (651)
                      ..+.++|+.|+..|+.+.+++|++.+.. ++..+..+.||||.|+..++.+++++|+++|++++..+..|.||||+|+..
T Consensus         4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~   83 (231)
T 3aji_A            4 CVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASA   83 (231)
T ss_dssp             CCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHH
T ss_pred             ccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHc
Confidence            4467999999999999999999987643 566788899999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy11819        473 GYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP  552 (651)
Q Consensus       473 ~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~  552 (651)
                      |+.+++++|+++|++++..+..|.||||.|+..++.+++++|+++|.+++..+..|.||||+|+..|+.+++++|++.|+
T Consensus        84 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~  163 (231)
T 3aji_A           84 GXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKA  163 (231)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCC
Q psy11819        553 DLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK  618 (651)
Q Consensus       553 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~  618 (651)
                      +++.+|..|+||||+|+..++.+++++|+++|++++.+|..|.||+++|+..++.+++++|.++++
T Consensus       164 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a  229 (231)
T 3aji_A          164 STNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEA  229 (231)
T ss_dssp             CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHH
T ss_pred             CccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHccccc
Confidence            999999999999999999999999999999999999999999999999999999999999988764

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.3e-39  Score=301.04  Aligned_cols=215  Identities=25%  Similarity=0.302  Sum_probs=178.4

Q ss_pred             cCcCCChHHHHHHhcCcHHHHHHHHhcCCC--------CCCCCCCCCcHHHHHHHcCcH-HHHHHHHhCCCCCcccCCCC
Q psy11819        425 AGLYCWTPLLVATLGNFTEVVELLLEYKPN--------VNALDKDGCTALTIACKDGYY-EIAVLLLNSGAYINIQDRSG  495 (651)
Q Consensus       425 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~--------~~~~~~~g~t~l~~A~~~~~~-~~~~~Ll~~g~~~~~~~~~~  495 (651)
                      +|..+.++|+.|+..|+.+++++|++.|.+        ++..+..+.|||+.|+..+.. .++++|++.|++++..|.+|
T Consensus         7 kd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G   86 (269)
T 4b93_B            7 KDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDG   86 (269)
T ss_dssp             CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTS
T ss_pred             cCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCC
Confidence            455667899999999999999999998875        455667889999999988775 48899999999999999999


Q ss_pred             CcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHH
Q psy11819        496 DSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLE  575 (651)
Q Consensus       496 ~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~  575 (651)
                      .||||+|+..|+.+++++|++.|++++..+.+|.||+++|+..++.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus        87 ~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~  166 (269)
T 4b93_B           87 SSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHE  166 (269)
T ss_dssp             CCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGG
T ss_pred             CCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccccc
Q psy11819        576 AIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQK  642 (651)
Q Consensus       576 ~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~  642 (651)
                      +|++|+++|++++..|..|.||||+|+..|+.+++++|+++|++   ++.+|..|+||||+|.++++
T Consensus       167 ~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad---~~~~d~~G~TpL~~A~~~~~  230 (269)
T 4b93_B          167 LVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGAS---VQVLNKRQRTAVDCAEQNSK  230 (269)
T ss_dssp             GHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC---SCCCCTTSCCSGGGSCTTCH
T ss_pred             HHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHhCCc
Confidence            99999999999999999999999999999999999999999998   78899999999999998887

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=8.1e-39  Score=303.69  Aligned_cols=252  Identities=20%  Similarity=0.168  Sum_probs=200.3

Q ss_pred             HhhcCCCChHHHHHHHcCCHHHHHHHHHcCCC---CCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHH
Q psy11819        390 VMHLSYGTTPLVWACRKGHVEIVDILLKAGAN---VDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTAL  466 (651)
Q Consensus       390 ~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~---~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l  466 (651)
                      +..+..|.||||.|+..|+.+++++|++.|++   ++..+..|+||||+|+..++.+++++|+++|++++..+..|.|||
T Consensus         3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL   82 (282)
T 1oy3_D            3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL   82 (282)
T ss_dssp             CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred             CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence            45688899999999999999999999999988   788899999999999999999999999999999999999999999


Q ss_pred             HHHHHcCcHHHHHHHHhCCCCCcccC-------------CCCCcHHHHHHhcCcHH-HHHHHHhcCCCCCCCCCCCCCHH
Q psy11819        467 TIACKDGYYEIAVLLLNSGAYINIQD-------------RSGDSNLIHAVKGGHRG-IVEALLKKYVDVDIPGKERKTAV  532 (651)
Q Consensus       467 ~~A~~~~~~~~~~~Ll~~g~~~~~~~-------------~~~~t~l~~A~~~~~~~-~v~~Ll~~~~~~~~~~~~g~t~l  532 (651)
                      |+|+..|+.+++++|+++|++.....             ..+.++++.+...+... ....+...+.+++..+..|.|||
T Consensus        83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L  162 (282)
T 1oy3_D           83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPL  162 (282)
T ss_dssp             HHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHH
T ss_pred             HHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHH
Confidence            99999999999999999987654221             23445555555544433 34444456778899999999999


Q ss_pred             HHHHHcCCHHHHHHHHhcCCCccccCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHH
Q psy11819        533 YTAVEKGNVPILKLLLTANPDLEIATKD-GDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVE  611 (651)
Q Consensus       533 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~  611 (651)
                      |+|+..|+.+++++|+++|++++..+.. |+||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..++.++++
T Consensus       163 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~  242 (282)
T 1oy3_D          163 HVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILAR  242 (282)
T ss_dssp             HHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHH
Confidence            9999999999999999999999998854 999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCcccccCCCCCCCCcccccccccchh
Q psy11819        612 VFIRNPKNNILLYRPNKAGETPYSIDMNNQKSI  644 (651)
Q Consensus       612 ~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~  644 (651)
                      +|+++|++   ++.+|..|.||+++|.......
T Consensus       243 ~Ll~~ga~---~~~~~~~g~tpl~~a~~~~~~~  272 (282)
T 1oy3_D          243 LLRAHGAP---EPEDGGDKLSPCSSSGSDSDSD  272 (282)
T ss_dssp             HHHHTTCC---CCCCC-----------------
T ss_pred             HHHHcCCC---cCcCCCcccccccccCCccccc
Confidence            99999999   7889999999999998876543

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=100.00  E-value=8.1e-40  Score=321.98  Aligned_cols=281  Identities=18%  Similarity=0.202  Sum_probs=190.4

Q ss_pred             CCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHHHHHHHHcCCCCCCCCCCCCCCH
Q psy11819        214 ADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTP  293 (651)
Q Consensus       214 ~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~  293 (651)
                      .+.+..|..|.||||+|+..|+.+++++|++.|++++..+..|.|||++|+..|+.+++++|++.+.+.+..   .|.||
T Consensus        11 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~---~g~t~   87 (364)
T 3ljn_A           11 LNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLW---HGQKP   87 (364)
T ss_dssp             -----CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCB---TTBCH
T ss_pred             CCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcccc---CCCCH
Confidence            345667788899999999999999999999999999988888888999988888888888888888855442   47788


Q ss_pred             HHHHHHcCCHHHHHHHHHc----CCCcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHH
Q psy11819        294 LVWACRKGHVEIVDILLKA----GANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMK  369 (651)
Q Consensus       294 l~~a~~~~~~~~v~~Ll~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (651)
                      |++|+..|+.+++++|++.    |.+++..                                                  
T Consensus        88 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~--------------------------------------------------  117 (364)
T 3ljn_A           88 IHLAVMANKTDLVVALVEGAKERGQMPESL--------------------------------------------------  117 (364)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHTCCHHHH--------------------------------------------------
T ss_pred             HHHHHHcCCHHHHHHHHHhccccCCCHHHH--------------------------------------------------
Confidence            8888888888888888876    3322100                                                  


Q ss_pred             HHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcC--cHHHHHH
Q psy11819        370 HFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGN--FTEVVEL  447 (651)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~--~~~~~~~  447 (651)
                                                     ...+....        -...+++..+..+.||||+|+..+  +.+++++
T Consensus       118 -------------------------------~~~~~~~~--------~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~  158 (364)
T 3ljn_A          118 -------------------------------LNECDERE--------VNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKI  158 (364)
T ss_dssp             -------------------------------HTCCCCCC--------EEEETTEEEEESCCCHHHHHHHSCGGGHHHHHH
T ss_pred             -------------------------------HhhcchHh--------hhhhccccCCCCCCCHHHHHHHcCCchHHHHHH
Confidence                                           00000000        001123335556667777777776  6777777


Q ss_pred             HHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCC-----CcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCC
Q psy11819        448 LLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAY-----INIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVD  522 (651)
Q Consensus       448 Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~  522 (651)
                      |+++|++++..+..|.||||+|+..|+.+++++|+++|++     ++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus       159 Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~  238 (364)
T 3ljn_A          159 LVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVN  238 (364)
T ss_dssp             HHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTT
T ss_pred             HHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            7777777776777777777777777777777777776666     66666667777777777777777777777777777


Q ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccc------------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy11819        523 IPGKERKTAVYTAVEKGNVPILKLLLTANPDLEI------------ATKDGDTPLLKAVKTRNLEAIQMLIDKKAK  586 (651)
Q Consensus       523 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  586 (651)
                      ..|..|.||||+|+..|+.+++++|+++|++++.            .+..++||++.|+..++.+.+..|+..+++
T Consensus       239 ~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~~~~  314 (364)
T 3ljn_A          239 MEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLD  314 (364)
T ss_dssp             CCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHHHHHH
Confidence            6666777777777777777777777766654322            344566666666666666666666655443

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=100.00  E-value=5.5e-38  Score=287.93  Aligned_cols=219  Identities=24%  Similarity=0.265  Sum_probs=209.3

Q ss_pred             cCCChHHHHHHhcCcHHHHHHHHhcCCC-CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhc
Q psy11819        427 LYCWTPLLVATLGNFTEVVELLLEYKPN-VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKG  505 (651)
Q Consensus       427 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~  505 (651)
                      ..+.+||+.|+..|+.+.+++|++.+.. ++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus         4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~   83 (231)
T 3aji_A            4 CVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASA   83 (231)
T ss_dssp             CCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHH
T ss_pred             ccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHc
Confidence            3567999999999999999999987654 677789999999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q psy11819        506 GHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKA  585 (651)
Q Consensus       506 ~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga  585 (651)
                      |+.+++++|+++|.+++..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|+
T Consensus        84 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~  163 (231)
T 3aji_A           84 GXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKA  163 (231)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccccchhhhhc
Q psy11819        586 KITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQE  648 (651)
Q Consensus       586 ~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~  648 (651)
                      +++.+|..|.||||+|+..++.+++++|+++|.+   ++.+|..|+||+|+|.+.++..+++.
T Consensus       164 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~~i~~l  223 (231)
T 3aji_A          164 STNIQDTEGNTPLHLACDEERVEEAKFLVTQGAS---IYIENKEEKTPLQVAKGGLGLILKRL  223 (231)
T ss_dssp             CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---SCCCCTTSCCHHHHSCHHHHHHHHHH
T ss_pred             CccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHhhHHHHHHHH
Confidence            9999999999999999999999999999999998   77899999999999999988877764

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=100.00  E-value=1e-37  Score=285.72  Aligned_cols=214  Identities=22%  Similarity=0.222  Sum_probs=145.3

Q ss_pred             CChHHHHHHhcCcHHHHHHHHhcCCCCCC-CCCCCCcHHHHHHHcCcHHHHHHHHhCC--CCCcc-cCCCCCcHHHHHHh
Q psy11819        429 CWTPLLVATLGNFTEVVELLLEYKPNVNA-LDKDGCTALTIACKDGYYEIAVLLLNSG--AYINI-QDRSGDSNLIHAVK  504 (651)
Q Consensus       429 ~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~g--~~~~~-~~~~~~t~l~~A~~  504 (651)
                      |.||||.|+..++.+++++|++.+.+... .+..|.||||+|+..|+.+++++|+++|  .+++. .+..|.||||.|+.
T Consensus         2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~   81 (228)
T 2dzn_A            2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS   81 (228)
T ss_dssp             -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred             CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence            34566666666666666666666555433 5666667777777777777777777766  44444 55666777777777


Q ss_pred             cCcHHHHHHHHhcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy11819        505 GGHRGIVEALLKKY--VDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLID  582 (651)
Q Consensus       505 ~~~~~~v~~Ll~~~--~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  582 (651)
                      .|+.+++++|+++|  .+++..+..|.||||+|+..++.+++++|+++|++++..+..|+||||+|+..|+.+++++|++
T Consensus        82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  161 (228)
T 2dzn_A           82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG  161 (228)
T ss_dssp             HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            77777777777766  6666666777777777777777777777777777777777777777777777777777777777


Q ss_pred             cC-CCCcccCCCCCcHHHHHHHcCChHHHHHHH-hCCCCcccccCCCCCCCCcccccccccchhh
Q psy11819        583 KK-AKITAVDKRGDTVLHIAMRARSKTIVEVFI-RNPKNNILLYRPNKAGETPYSIDMNNQKSIL  645 (651)
Q Consensus       583 ~g-a~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll-~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~  645 (651)
                      .| ++++.+|..|+||||+|+..++.+++++|+ +.|++   ++.+|..|+||+|+|.+.+..++
T Consensus       162 ~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~---~~~~~~~g~t~l~~A~~~~~~~~  223 (228)
T 2dzn_A          162 LGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE---YDLVDNKGAKAEDVALNEQVKKF  223 (228)
T ss_dssp             TTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC---SCCBCTTSCBGGGGCSSTTHHHH
T ss_pred             cCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC---CCccCCCCCcHHHHHHHHHHHHH
Confidence            77 777777777777777777777777777777 66666   55667777777777766654443

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=2.2e-38  Score=300.70  Aligned_cols=218  Identities=22%  Similarity=0.140  Sum_probs=170.5

Q ss_pred             HHhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCC----------
Q psy11819        389 LVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNAL----------  458 (651)
Q Consensus       389 ~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~----------  458 (651)
                      ++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++++++....          
T Consensus        38 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~  117 (282)
T 1oy3_D           38 LDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQ  117 (282)
T ss_dssp             GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------
T ss_pred             ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhccc
Confidence            4566788999999999999999999999999999999999999999999999999999999998764322          


Q ss_pred             ---CCCCCcHHHHHHHcCcH-HHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCC-CCCHHH
Q psy11819        459 ---DKDGCTALTIACKDGYY-EIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKE-RKTAVY  533 (651)
Q Consensus       459 ---~~~g~t~l~~A~~~~~~-~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-g~t~l~  533 (651)
                         ...+.++++.+...+.. .....+...+.+++..+..|.||||.|+..|+.+++++|+++|++++..+.. |.||||
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~  197 (282)
T 1oy3_D          118 DCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLH  197 (282)
T ss_dssp             --------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHH
T ss_pred             ccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHH
Confidence               12344556555554433 3444555668889999999999999999999999999999999999998865 999999


Q ss_pred             HHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC
Q psy11819        534 TAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARS  606 (651)
Q Consensus       534 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~  606 (651)
                      +|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||+++|....+
T Consensus       198 ~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~  270 (282)
T 1oy3_D          198 LAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSD  270 (282)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC---------------
T ss_pred             HHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999987654

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=100.00  E-value=1.3e-37  Score=285.06  Aligned_cols=218  Identities=23%  Similarity=0.290  Sum_probs=205.6

Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCCCCCC-cCcCCChHHHHHHhcCcHHHHHHHHhcC--CCCCC-CCCCCCcHHHHHHH
Q psy11819        396 GTTPLVWACRKGHVEIVDILLKAGANVDV-AGLYCWTPLLVATLGNFTEVVELLLEYK--PNVNA-LDKDGCTALTIACK  471 (651)
Q Consensus       396 ~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~~~t~l~~a~~~~~~~~~~~Ll~~~--~~~~~-~~~~g~t~l~~A~~  471 (651)
                      |.|||+.|+..|+.+++++|++.+.++.. .+..|.||||+|+..++.+++++|+++|  .+++. .+..|.||||+|+.
T Consensus         2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~   81 (228)
T 2dzn_A            2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS   81 (228)
T ss_dssp             -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred             CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence            67999999999999999999999877654 7889999999999999999999999999  66666 78899999999999


Q ss_pred             cCcHHHHHHHHhCC--CCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Q psy11819        472 DGYYEIAVLLLNSG--AYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLT  549 (651)
Q Consensus       472 ~~~~~~~~~Ll~~g--~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~  549 (651)
                      .|+.+++++|+++|  ++++..+..|.||||.|+..++.+++++|+++|++++..+..|.||||+|+..|+.+++++|++
T Consensus        82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  161 (228)
T 2dzn_A           82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG  161 (228)
T ss_dssp             HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            99999999999998  8999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cC-CCccccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhC
Q psy11819        550 AN-PDLEIATKDGDTPLLKAVKTRNLEAIQMLI-DKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN  616 (651)
Q Consensus       550 ~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~  616 (651)
                      .| ++++..|..|+||||+|+..|+.+++++|+ +.|++++.+|..|.||+++|++   .+++++|+++
T Consensus       162 ~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~---~~~~~~l~~~  227 (228)
T 2dzn_A          162 LGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNN  227 (228)
T ss_dssp             TTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS---TTHHHHHHTT
T ss_pred             cCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH---HHHHHHHHhc
Confidence            99 999999999999999999999999999999 8899999999999999999965   4778888764

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=100.00  E-value=2.6e-37  Score=285.87  Aligned_cols=227  Identities=26%  Similarity=0.282  Sum_probs=216.0

Q ss_pred             cCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCC-CCCcHHHHHHH
Q psy11819        393 LSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDK-DGCTALTIACK  471 (651)
Q Consensus       393 ~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~g~t~l~~A~~  471 (651)
                      +..+.++|+.|+..|+.+++++|++.|++++..+..+.|||+.|+..++.+++++|+++|.+++.... .|.||||.|+.
T Consensus         6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~   85 (240)
T 3eu9_A            6 DDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATR   85 (240)
T ss_dssp             SCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHH
T ss_pred             ccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHH
Confidence            45688999999999999999999999999999999999999999999999999999999998876654 49999999999


Q ss_pred             cCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHhc
Q psy11819        472 DGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGN-VPILKLLLTA  550 (651)
Q Consensus       472 ~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~-~~~v~~Ll~~  550 (651)
                      .|+.+++++|+++|++++..+..|.|||+.|+..++.+++++|+++|++++..+..|.||||+|+..++ .+++++|++.
T Consensus        86 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~  165 (240)
T 3eu9_A           86 QGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTF  165 (240)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHT
T ss_pred             cCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999999999999999999997666 8999999999


Q ss_pred             CCCccccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCC
Q psy11819        551 NPDLEIATK-DGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKN  619 (651)
Q Consensus       551 ~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~  619 (651)
                      |++++..+. .|.||||+|+..|+.+++++|+++|++++..|..|.|||++|+..++.+++++|+++++.
T Consensus       166 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~  235 (240)
T 3eu9_A          166 NVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA  235 (240)
T ss_dssp             TCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred             CCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence            999999987 999999999999999999999999999999999999999999999999999999999876

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=100.00  E-value=1.3e-37  Score=283.73  Aligned_cols=213  Identities=21%  Similarity=0.227  Sum_probs=204.0

Q ss_pred             CCHHHHHHHHHcCCCCCCc-CcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCC
Q psy11819        407 GHVEIVDILLKAGANVDVA-GLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSG  485 (651)
Q Consensus       407 ~~~~~v~~Ll~~~~~~~~~-~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g  485 (651)
                      |+.+++++|+++|.+++.. +..+.||||+|+..++.+++++|+++|++++..+..|.||||+|+..|+.+++++|++++
T Consensus         2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~   81 (223)
T 2f8y_A            2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR   81 (223)
T ss_dssp             ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred             CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence            5678899999999998765 789999999999999999999999999999999999999999999999999999999998


Q ss_pred             C-CCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcH
Q psy11819        486 A-YINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTP  564 (651)
Q Consensus       486 ~-~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~  564 (651)
                      . +++..+..|.||||.|+..++.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++..+..|.||
T Consensus        82 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~  161 (223)
T 2f8y_A           82 ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETP  161 (223)
T ss_dssp             TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred             CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCH
Confidence            7 889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCC
Q psy11819        565 LLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKN  619 (651)
Q Consensus       565 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~  619 (651)
                      ||+|+..|+.+++++|+++|++++.+|..|.||+++|+..++.+++++|++++..
T Consensus       162 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~  216 (223)
T 2f8y_A          162 LFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV  216 (223)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence            9999999999999999999999999999999999999999999999999999976

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=100.00  E-value=2.9e-37  Score=295.43  Aligned_cols=240  Identities=24%  Similarity=0.262  Sum_probs=182.5

Q ss_pred             HHHcCCHHHHHHHHHcCCCCCC---------cCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q psy11819        403 ACRKGHVEIVDILLKAGANVDV---------AGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDG  473 (651)
Q Consensus       403 A~~~~~~~~v~~Ll~~~~~~~~---------~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~  473 (651)
                      ++..++.+.++.++....++..         .+..+.|+|+.|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus         5 ~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g   84 (299)
T 1s70_B            5 DAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDD   84 (299)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence            4455555666666655433221         1224456777777777777777777777777777777777777777777


Q ss_pred             cHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc-CC
Q psy11819        474 YYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTA-NP  552 (651)
Q Consensus       474 ~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~-~~  552 (651)
                      +.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++++.. +.
T Consensus        85 ~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~  164 (299)
T 1s70_B           85 NVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGV  164 (299)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTC
T ss_pred             CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCC
Confidence            77777777777777777777777777777777777777777777777777777777777777777777776665543 33


Q ss_pred             Cc--------------------------cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC
Q psy11819        553 DL--------------------------EIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARS  606 (651)
Q Consensus       553 ~~--------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~  606 (651)
                      ++                          ...+..|.||||+|+..|+.++|++|++.|++++.+|..|.||||+|+..|+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~  244 (299)
T 1s70_B          165 DIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGK  244 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred             CchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCC
Confidence            32                          2356789999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHhCCCCcccccCCCCCCCCcccccccccchhh
Q psy11819        607 KTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSIL  645 (651)
Q Consensus       607 ~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~  645 (651)
                      .+++++|+++|.+   ++.+|..|+||||+|.+.....+
T Consensus       245 ~~~v~~Ll~~gad---~~~~d~~g~t~l~~A~~~~~~~l  280 (299)
T 1s70_B          245 EEACRILVENLCD---MEAVNKVGQTAFDVADEDILGYL  280 (299)
T ss_dssp             HHHHHHHHHTTCC---TTCCCTTSCCTTTSCCSGGGHHH
T ss_pred             HHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHHHHHHH
Confidence            9999999999998   77899999999999987654433

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=100.00  E-value=1.4e-37  Score=293.18  Aligned_cols=238  Identities=20%  Similarity=0.194  Sum_probs=213.7

Q ss_pred             cCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q psy11819        393 LSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKD  472 (651)
Q Consensus       393 ~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~  472 (651)
                      +..|.||||.|+..|+.+++++|++.|++++..  +|+||||+|+..++.+++++|+++|++++..+..|.||||+|+..
T Consensus        28 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~  105 (285)
T 3kea_A           28 DVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDS  105 (285)
T ss_dssp             CTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHc
Confidence            466899999999999999999999999999877  489999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHhCCCCCcccCCCC-CcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy11819        473 GYYEIAVLLLNSGAYINIQDRSG-DSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN  551 (651)
Q Consensus       473 ~~~~~~~~Ll~~g~~~~~~~~~~-~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~  551 (651)
                      |+.+++++|+++|++++..+..| .||||.|+..|+.+++++|+++|.+.... ..|.||||+|+..|+.+++++|+++|
T Consensus       106 g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g  184 (285)
T 3kea_A          106 GNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYM  184 (285)
T ss_dssp             TCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcC
Confidence            99999999999999999999999 89999999999999999999999876322 28899999999999999999999999


Q ss_pred             CCccccCCCCCcH-HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCC
Q psy11819        552 PDLEIATKDGDTP-LLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAG  630 (651)
Q Consensus       552 ~~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g  630 (651)
                      ++++..+..|+|| ||+|+..|+.+++++|+++|++++..|.       .|+..++.+++++|+++|.+.     .....
T Consensus       185 ad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~~-----~~~~~  252 (285)
T 3kea_A          185 TSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEKHVEY-----KSDSY  252 (285)
T ss_dssp             HHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHHHHHH-----TTCTT
T ss_pred             CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHcCCCC-----CCccc
Confidence            9999999999998 9999999999999999999999998883       678899999999999999762     22223


Q ss_pred             CCcccccccccchhh
Q psy11819        631 ETPYSIDMNNQKSIL  645 (651)
Q Consensus       631 ~t~l~~a~~~~~~~~  645 (651)
                      .+.+.++-.++-.++
T Consensus       253 ~~~~~~~~~~~~~~i  267 (285)
T 3kea_A          253 TKDLDIVKNNKLDEI  267 (285)
T ss_dssp             TTTCHHHHTCSHHHH
T ss_pred             cchHHHHhhhhHHHH
Confidence            344555554444333

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=100.00  E-value=1.1e-36  Score=291.47  Aligned_cols=222  Identities=29%  Similarity=0.380  Sum_probs=204.7

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCc
Q psy11819        395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGY  474 (651)
Q Consensus       395 ~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~  474 (651)
                      .+.|+|+.|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..|+
T Consensus        39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~  118 (299)
T 1s70_B           39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGY  118 (299)
T ss_dssp             CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Confidence            36799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhc-CCCC--------------------------CCCCCC
Q psy11819        475 YEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKK-YVDV--------------------------DIPGKE  527 (651)
Q Consensus       475 ~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~-~~~~--------------------------~~~~~~  527 (651)
                      .+++++|+++|++++..+..|.|||++|+..++.+++++++.. +.++                          ...+..
T Consensus       119 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  198 (299)
T 1s70_B          119 LDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKS  198 (299)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTT
T ss_pred             HHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCC
Confidence            9999999999999999999999999999999999999887763 3332                          235678


Q ss_pred             CCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCh
Q psy11819        528 RKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSK  607 (651)
Q Consensus       528 g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~  607 (651)
                      |.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+.. ..
T Consensus       199 g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~-~~  277 (299)
T 1s70_B          199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED-IL  277 (299)
T ss_dssp             CCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG-GG
T ss_pred             CCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH-HH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999764 45


Q ss_pred             HHHHHHHhCC
Q psy11819        608 TIVEVFIRNP  617 (651)
Q Consensus       608 ~~~~~Ll~~~  617 (651)
                      +.++.+++..
T Consensus       278 ~~l~~l~~~~  287 (299)
T 1s70_B          278 GYLEELQKKQ  287 (299)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHH
Confidence            5555555443

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=100.00  E-value=4.6e-38  Score=302.63  Aligned_cols=232  Identities=20%  Similarity=0.223  Sum_probs=188.7

Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCc-----------------CcCCChHHHHHHhcCcHHHHHHHHhcCCCCC
Q psy11819        394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVA-----------------GLYCWTPLLVATLGNFTEVVELLLEYKPNVN  456 (651)
Q Consensus       394 ~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~-----------------~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~  456 (651)
                      ..|.++++     |+.+++++|+++|++++..                 .....+..+.++..+..+++++|++.|++++
T Consensus        50 ~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn  124 (327)
T 1sw6_A           50 PSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLN  124 (327)
T ss_dssp             CCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTSCCCSC
T ss_pred             CCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcc
Confidence            34566655     8899999999999876541                 1111223466777778899999999999999


Q ss_pred             C-CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCc---HHHHHHHHhcC-CCCCCCCCCCCCH
Q psy11819        457 A-LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGH---RGIVEALLKKY-VDVDIPGKERKTA  531 (651)
Q Consensus       457 ~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~---~~~v~~Ll~~~-~~~~~~~~~g~t~  531 (651)
                      . .+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+   .++++.|++.+ .+++..+..|.||
T Consensus       125 ~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tp  204 (327)
T 1sw6_A          125 IPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTI  204 (327)
T ss_dssp             SCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCH
T ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCH
Confidence            9 89999999999999999999999999999999999999999999999999   67888888875 6789999999999


Q ss_pred             HHHHHH----cCCHHHHHHHHhc--------------------CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q psy11819        532 VYTAVE----KGNVPILKLLLTA--------------------NPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKI  587 (651)
Q Consensus       532 l~~A~~----~~~~~~v~~Ll~~--------------------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~  587 (651)
                      ||+|+.    .|+.+++++|++.                    |++++..+..|+||||+|+.      +++|+++  ++
T Consensus       205 Lh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~~  276 (327)
T 1sw6_A          205 LHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--ML  276 (327)
T ss_dssp             HHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH--TT
T ss_pred             HHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--CC
Confidence            999999    8999999999987                    88999999999999999995      8999998  68


Q ss_pred             cccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCccccccccc
Q psy11819        588 TAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQ  641 (651)
Q Consensus       588 ~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~  641 (651)
                      +.+|..|+||||+|+..|+.+++++|+++|++   ++.+|..|+||||+|+++|
T Consensus       277 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad---~~~~d~~G~TpL~~A~~~g  327 (327)
T 1sw6_A          277 NAQDSNGDTCLNIAARLGNISIVDALLDYGAD---PFIANKSGLRPVDFGAGLE  327 (327)
T ss_dssp             TCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC---TTCCCTTSCCGGGGTCC--
T ss_pred             CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CcccCCCCCCHHHHHHhcC
Confidence            88999999999999999999999999999999   7889999999999999875

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=100.00  E-value=4.4e-36  Score=277.56  Aligned_cols=225  Identities=20%  Similarity=0.277  Sum_probs=212.5

Q ss_pred             CCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccC-CCCCcHHH
Q psy11819        422 VDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD-RSGDSNLI  500 (651)
Q Consensus       422 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~t~l~  500 (651)
                      ++..+..+.++|+.|+..++.+++++|++.|++++..+..|.||||.|+..|+.+++++|+++|++++... ..|.|||+
T Consensus         2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~   81 (240)
T 3eu9_A            2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLH   81 (240)
T ss_dssp             CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred             ccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence            34567788999999999999999999999999999999999999999999999999999999999888655 45999999


Q ss_pred             HHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCC-HHHHHH
Q psy11819        501 HAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRN-LEAIQM  579 (651)
Q Consensus       501 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~  579 (651)
                      .|+..++.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++ .+++++
T Consensus        82 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~  161 (240)
T 3eu9_A           82 WATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRL  161 (240)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHH
T ss_pred             HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999997766 899999


Q ss_pred             HHHcCCCCcccCC-CCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccccchhhhhcc
Q psy11819        580 LIDKKAKITAVDK-RGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQEC  649 (651)
Q Consensus       580 Ll~~ga~~~~~d~-~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~  649 (651)
                      |++.|++++..+. .|.||||+|+..++.+++++|+++|.+   ++.+|..|+||||+|++.++..+++.+
T Consensus       162 L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~~~v~~L  229 (240)
T 3eu9_A          162 LLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN---VDAQNIKGESALDLAKQRKNVWMINHL  229 (240)
T ss_dssp             HHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC---TTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred             HHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence            9999999999997 999999999999999999999999988   778999999999999999999888754

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=100.00  E-value=1.3e-36  Score=277.16  Aligned_cols=207  Identities=22%  Similarity=0.268  Sum_probs=196.5

Q ss_pred             CcHHHHHHHHhcCCCCCCC-CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcC
Q psy11819        440 NFTEVVELLLEYKPNVNAL-DKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKY  518 (651)
Q Consensus       440 ~~~~~~~~Ll~~~~~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~  518 (651)
                      |+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++|++++..+..|.||||.|+..++.+++++|++++
T Consensus         2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~   81 (223)
T 2f8y_A            2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR   81 (223)
T ss_dssp             ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred             CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence            5677889999999998776 789999999999999999999999999999999999999999999999999999999998


Q ss_pred             C-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcH
Q psy11819        519 V-DVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTV  597 (651)
Q Consensus       519 ~-~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~  597 (651)
                      . +++..+..|.||||+|+..++.+++++|++.|++++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus        82 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~  161 (223)
T 2f8y_A           82 ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETP  161 (223)
T ss_dssp             TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred             CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCH
Confidence            7 889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccccchhhhhcc
Q psy11819        598 LHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQEC  649 (651)
Q Consensus       598 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~  649 (651)
                      ||+|+..++.+++++|++++++   ++.+|..|+||+|+|++.++..+++.+
T Consensus       162 L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~~i~~~L  210 (223)
T 2f8y_A          162 LFLAAREGSYETAKVLLDHFAN---RDITDHMDRLPRDIAQERMHHDIVRLL  210 (223)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHcCCC---CccccccCCCHHHHHHHhcchHHHHHH
Confidence            9999999999999999999998   678999999999999999999888764

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=100.00  E-value=1.1e-36  Score=287.14  Aligned_cols=240  Identities=20%  Similarity=0.153  Sum_probs=206.0

Q ss_pred             ChHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcch
Q psy11819        267 GYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLT  346 (651)
Q Consensus       267 ~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (651)
                      ...++.++|.+.  +++..+. .|.|||++|+..|+.+++++|+++|++++..                           
T Consensus        11 ~~~~v~~lL~~~--~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~---------------------------   60 (285)
T 3kea_A           11 KSKQLKSFLSSK--DTFKADV-HGHSASYYAIADNNVRLVCTLLNAGALKNLL---------------------------   60 (285)
T ss_dssp             CHHHHHHHHHST--TTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC---------------------------
T ss_pred             CHHHHHHHHHhC--CCCccCC-CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC---------------------------
Confidence            345555555554  3455554 6889999999999999999999988876643                           


Q ss_pred             hchhcccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Q psy11819        347 VGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAG  426 (651)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~  426 (651)
                                                                      +|.||||.|+..|+.+++++|+++|++++..+
T Consensus        61 ------------------------------------------------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d   92 (285)
T 3kea_A           61 ------------------------------------------------ENEFPLHQAATLEDTKIVKILLFSGLDDSQFD   92 (285)
T ss_dssp             ------------------------------------------------TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCC
T ss_pred             ------------------------------------------------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence                                                            26799999999999999999999999999999


Q ss_pred             cCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCC-CcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhc
Q psy11819        427 LYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDG-CTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKG  505 (651)
Q Consensus       427 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g-~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~  505 (651)
                      ..|+||||+|+..++.+++++|+++|++++..+..| .||||+|+..|+.+++++|+++|+++... ..|.||||.|+..
T Consensus        93 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~  171 (285)
T 3kea_A           93 DKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKN  171 (285)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHT
T ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHc
Confidence            999999999999999999999999999999999998 79999999999999999999999866322 2789999999999


Q ss_pred             CcHHHHHHHHhcCCCCCCCCCCCCCH-HHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q psy11819        506 GHRGIVEALLKKYVDVDIPGKERKTA-VYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK  584 (651)
Q Consensus       506 ~~~~~v~~Ll~~~~~~~~~~~~g~t~-l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g  584 (651)
                      |+.+++++|+++|++++..+..|.|| ||+|+..++.+++++|+++|++++..+.       .|+..|+.++|++|+++|
T Consensus       172 g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g  244 (285)
T 3kea_A          172 GHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEKH  244 (285)
T ss_dssp             TCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHcC
Confidence            99999999999999999999999997 9999999999999999999999988873       567789999999999999


Q ss_pred             CCCcccCC
Q psy11819        585 AKITAVDK  592 (651)
Q Consensus       585 a~~~~~d~  592 (651)
                      +++...+.
T Consensus       245 ~~~~~~~~  252 (285)
T 3kea_A          245 VEYKSDSY  252 (285)
T ss_dssp             HHHTTCTT
T ss_pred             CCCCCccc
Confidence            88765543

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=100.00  E-value=8.8e-37  Score=280.50  Aligned_cols=220  Identities=19%  Similarity=0.185  Sum_probs=189.0

Q ss_pred             CcCcCCChHHHHHHhcCcHHHHHHHHhcCC----CCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHH
Q psy11819        424 VAGLYCWTPLLVATLGNFTEVVELLLEYKP----NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNL  499 (651)
Q Consensus       424 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~----~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l  499 (651)
                      ..+..|.||||+|+..++.+++++|++.+.    +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||
T Consensus         3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L   82 (236)
T 1ikn_D            3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPL   82 (236)
T ss_dssp             ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHH
T ss_pred             cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence            356677888888888888888888877654    6788888899999999999999999999999999999999999999


Q ss_pred             HHHHhcCcHHHHHHHHhcCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCC-CCCcHHHHHHHcC
Q psy11819        500 IHAVKGGHRGIVEALLKKYVD------VDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATK-DGDTPLLKAVKTR  572 (651)
Q Consensus       500 ~~A~~~~~~~~v~~Ll~~~~~------~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~g~t~L~~A~~~~  572 (651)
                      |+|+..|+.+++++|++++.+      ++..+..|.||||+|+..|+.+++++|+++|++++..+. .|+||||+|+..|
T Consensus        83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~  162 (236)
T 1ikn_D           83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ  162 (236)
T ss_dssp             HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred             HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC
Confidence            999999999999999998765      467788999999999999999999999999999999997 9999999999999


Q ss_pred             CHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccccchh
Q psy11819        573 NLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSI  644 (651)
Q Consensus       573 ~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~  644 (651)
                      +.++|++|+++|++++.+|..|.|||++|+..++.+++++|+++|+++. ...++..|.||++.+....++.
T Consensus       163 ~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~~~~~  233 (236)
T 1ikn_D          163 NPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL-QMLPESEDEESYDTESEFTEFT  233 (236)
T ss_dssp             CHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG-SSCCCCCTTTCCCCC-------
T ss_pred             CHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh-hcCCccchHHHHhhhccccccc
Confidence            9999999999999999999999999999999999999999999999753 4578999999999988776654

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=100.00  E-value=1e-37  Score=300.16  Aligned_cols=200  Identities=20%  Similarity=0.145  Sum_probs=164.0

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCCCC-cCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCc--
Q psy11819        398 TPLVWACRKGHVEIVDILLKAGANVDV-AGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGY--  474 (651)
Q Consensus       398 t~l~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~--  474 (651)
                      +..+.|+..+..+++++|++.|++++. .+..|+||||+|+..++.+++++|+++|++++..+..|.||||+|+..|+  
T Consensus        99 ~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~  178 (327)
T 1sw6_A           99 QQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNY  178 (327)
T ss_dssp             -----CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHH
T ss_pred             chhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccc
Confidence            445677777777888888889999998 78899999999999999999999999999999999999999999999888  


Q ss_pred             -HHHHHHHHhCC-CCCcccCCCCCcHHHHHHh----cCcHHHHHHHHhc--------------------CCCCCCCCCCC
Q psy11819        475 -YEIAVLLLNSG-AYINIQDRSGDSNLIHAVK----GGHRGIVEALLKK--------------------YVDVDIPGKER  528 (651)
Q Consensus       475 -~~~~~~Ll~~g-~~~~~~~~~~~t~l~~A~~----~~~~~~v~~Ll~~--------------------~~~~~~~~~~g  528 (651)
                       .++++.|++.+ ++++..+..|.||||+|+.    .|+.+++++|++.                    |++++..+..|
T Consensus       179 ~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g  258 (327)
T 1sw6_A          179 DSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGER  258 (327)
T ss_dssp             HTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---------------
T ss_pred             cHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccC
Confidence             67777777776 6788889999999999998    8899999999876                    88999999999


Q ss_pred             CCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Q psy11819        529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRAR  605 (651)
Q Consensus       529 ~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~  605 (651)
                      .||||.|+.      +++|++.  +++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.+|
T Consensus       259 ~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g  327 (327)
T 1sw6_A          259 KDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE  327 (327)
T ss_dssp             -CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred             CChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence            999999985      8999998  68889999999999999999999999999999999999999999999998764

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=100.00  E-value=2.2e-34  Score=264.01  Aligned_cols=204  Identities=21%  Similarity=0.221  Sum_probs=139.5

Q ss_pred             CChHHHHHHHcCCHHHHHHHHHc-CCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCC-----CCCCCCCCcHHHHH
Q psy11819        396 GTTPLVWACRKGHVEIVDILLKA-GANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV-----NALDKDGCTALTIA  469 (651)
Q Consensus       396 ~~t~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~-----~~~~~~g~t~l~~A  469 (651)
                      |.||||.|+..|+.+++++|++. |++++..+..|+||||+|+..++.+++++|+++|+++     +..+..|.||||+|
T Consensus         3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A   82 (232)
T 2rfa_A            3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA   82 (232)
T ss_dssp             TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHH
Confidence            45555555555555555555554 5555555555555555555555555555555555443     33344455555555


Q ss_pred             HHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Q psy11819        470 CKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLT  549 (651)
Q Consensus       470 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~  549 (651)
                      +..|+.+++++|+++|++++..+...  .+                  ....+..+..|.||||+|+..|+.+++++|++
T Consensus        83 ~~~~~~~~v~~Ll~~g~~~~~~~~~~--~~------------------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  142 (232)
T 2rfa_A           83 VINQNVNLVRALLARGASVSARATGS--VF------------------HYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE  142 (232)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCCSG--GG------------------SCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH
T ss_pred             HHcCCHHHHHHHHhCCCCCCcccCCc--ce------------------eecccccccCCCCHHHHHHHcCCHHHHHHHHH
Confidence            55555555555555555444433211  00                  01122334579999999999999999999999


Q ss_pred             cCCCccccCCCCCcHHHHHHHcCCHHHH----HHHHHcCCCC------cccCCCCCcHHHHHHHcCChHHHHHHHhCCCC
Q psy11819        550 ANPDLEIATKDGDTPLLKAVKTRNLEAI----QMLIDKKAKI------TAVDKRGDTVLHIAMRARSKTIVEVFIRNPKN  619 (651)
Q Consensus       550 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v----~~Ll~~ga~~------~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~  619 (651)
                      +|++++..|..|+||||+|+..++.+++    ++|++.|+++      +.+|..|.||||+|+..|+.+++++|++++..
T Consensus       143 ~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~  222 (232)
T 2rfa_A          143 HGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH  222 (232)
T ss_dssp             TTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence            9999999999999999999999999888    9999999987      57899999999999999999999999998865

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=100.00  E-value=8.7e-34  Score=253.74  Aligned_cols=191  Identities=28%  Similarity=0.367  Sum_probs=174.6

Q ss_pred             cCCChHHHHHHhcCcHHHHHHHHhcCC-CCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhc
Q psy11819        427 LYCWTPLLVATLGNFTEVVELLLEYKP-NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKG  505 (651)
Q Consensus       427 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~-~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~  505 (651)
                      ..+.+||+.|+..++.+.++.|++.+. +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||.|+..
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~   82 (201)
T 3hra_A            3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ   82 (201)
T ss_dssp             CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence            456788899998888888888888775 8888889999999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHH-hcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC-CCccccCCCCCcHHHHHHHcCC-----HHHHH
Q psy11819        506 GHRGIVEALL-KKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN-PDLEIATKDGDTPLLKAVKTRN-----LEAIQ  578 (651)
Q Consensus       506 ~~~~~v~~Ll-~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~~~~~-----~~~v~  578 (651)
                      |+.+++++|+ ..+.+++..+..|.||||+|+..|+.+++++|++.| ++++..+..|+||||+|+..++     .++++
T Consensus        83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~  162 (201)
T 3hra_A           83 GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVK  162 (201)
T ss_dssp             TCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHH
T ss_pred             CCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHH
Confidence            9999999999 456788999999999999999999999999999998 8999999999999999999988     89999


Q ss_pred             HHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCC
Q psy11819        579 MLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNP  617 (651)
Q Consensus       579 ~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~  617 (651)
                      +|+++|++++.+|..|.||||+|+..++.+++++|+++|
T Consensus       163 ~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G  201 (201)
T 3hra_A          163 LLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN  201 (201)
T ss_dssp             HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred             HHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence            999999999999999999999999999999999999875

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=100.00  E-value=3.3e-34  Score=244.63  Aligned_cols=155  Identities=28%  Similarity=0.455  Sum_probs=119.6

Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Q psy11819        465 ALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPIL  544 (651)
Q Consensus       465 ~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v  544 (651)
                      +|+.|++.|+.+++++|+++|++++.+|..|.|||+.|+..++.+++++|+++|++++.++.+|.||||+|+..|+.+++
T Consensus         7 ~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v   86 (169)
T 4gpm_A            7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVV   86 (169)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHH
Confidence            57777777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             HHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCC
Q psy11819        545 KLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKN  619 (651)
Q Consensus       545 ~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~  619 (651)
                      ++|+++|+++|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+|||++|+..|+.+++++|+++|++
T Consensus        87 ~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~  161 (169)
T 4gpm_A           87 KLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGW  161 (169)
T ss_dssp             HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC---
T ss_pred             HHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence            777777777777777777777777777777777777777777777777777777777777777777777777775

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=100.00  E-value=1.1e-35  Score=273.19  Aligned_cols=213  Identities=22%  Similarity=0.195  Sum_probs=194.7

Q ss_pred             hcCCCChHHHHHHHcCCHHHHHHHHHcCC----CCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHH
Q psy11819        392 HLSYGTTPLVWACRKGHVEIVDILLKAGA----NVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALT  467 (651)
Q Consensus       392 ~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~----~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~  467 (651)
                      .+..|.||||.|+..|+.+++++|++.+.    +++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||
T Consensus         4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~   83 (236)
T 1ikn_D            4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLH   83 (236)
T ss_dssp             ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHH
T ss_pred             CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence            45779999999999999999999998765    68999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCcHHHHHHHHhCCCC------CcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCC-CCCCHHHHHHHcCC
Q psy11819        468 IACKDGYYEIAVLLLNSGAY------INIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGK-ERKTAVYTAVEKGN  540 (651)
Q Consensus       468 ~A~~~~~~~~~~~Ll~~g~~------~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~g~t~l~~A~~~~~  540 (651)
                      +|+..|+.+++++|+++|++      ++..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+
T Consensus        84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~  163 (236)
T 1ikn_D           84 LACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQN  163 (236)
T ss_dssp             HHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred             HHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCC
Confidence            99999999999999999876      467788899999999999999999999999999999998 99999999999999


Q ss_pred             HHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc--ccCCCCCcHHHHHHHc
Q psy11819        541 VPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT--AVDKRGDTVLHIAMRA  604 (651)
Q Consensus       541 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~d~~g~t~l~~A~~~  604 (651)
                      .+++++|+++|++++..+..|+|||++|+.+++.+++++|+++|++..  ..+..|.|+.+.+...
T Consensus       164 ~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~  229 (236)
T 1ikn_D          164 PDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEF  229 (236)
T ss_dssp             HHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC---
T ss_pred             HHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhccc
Confidence            999999999999999999999999999999999999999999999876  7788888887766543

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=100.00  E-value=1.1e-33  Score=241.38  Aligned_cols=159  Identities=31%  Similarity=0.460  Sum_probs=141.0

Q ss_pred             hHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHH
Q psy11819        431 TPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGI  510 (651)
Q Consensus       431 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~  510 (651)
                      ++|+.|+..|+.+++++|+++|++++.+|.+|.|||++|+..++.+++++|+++|++++.++..|.||||+|+..|+.++
T Consensus         6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~   85 (169)
T 4gpm_A            6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV   85 (169)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence            46888888888888888888888888888899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcc
Q psy11819        511 VEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITA  589 (651)
Q Consensus       511 v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~  589 (651)
                      +++|+++|++++.+|.+|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.+|+.+++++|+++||+++.
T Consensus        86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~  164 (169)
T 4gpm_A           86 VKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH  164 (169)
T ss_dssp             HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred             HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999998764

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=100.00  E-value=9.2e-33  Score=247.07  Aligned_cols=191  Identities=25%  Similarity=0.280  Sum_probs=184.1

Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHcCC-CCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q psy11819        394 SYGTTPLVWACRKGHVEIVDILLKAGA-NVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKD  472 (651)
Q Consensus       394 ~~~~t~l~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~  472 (651)
                      ..+.|+|+.|+..|+.+.++.|++.+. +++..+..|.||||.|+..++.+++++|+++|++++..+..|.||||+|+..
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~   82 (201)
T 3hra_A            3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ   82 (201)
T ss_dssp             CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence            457899999999999999999998876 9999999999999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHH-hCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcC-CCCCCCCCCCCCHHHHHHHcCC-----HHHHH
Q psy11819        473 GYYEIAVLLL-NSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKY-VDVDIPGKERKTAVYTAVEKGN-----VPILK  545 (651)
Q Consensus       473 ~~~~~~~~Ll-~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~g~t~l~~A~~~~~-----~~~v~  545 (651)
                      |+.+++++|+ ..+.+++..+..|.||||.|+..++.+++++|+++| .+++..+..|.||||+|+..++     .++++
T Consensus        83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~  162 (201)
T 3hra_A           83 GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVK  162 (201)
T ss_dssp             TCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHH
T ss_pred             CCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHH
Confidence            9999999999 667799999999999999999999999999999998 8999999999999999999998     99999


Q ss_pred             HHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q psy11819        546 LLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK  584 (651)
Q Consensus       546 ~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g  584 (651)
                      +|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus       163 ~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G  201 (201)
T 3hra_A          163 LLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN  201 (201)
T ss_dssp             HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred             HHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence            999999999999999999999999999999999999876

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=100.00  E-value=6.1e-34  Score=265.11  Aligned_cols=190  Identities=19%  Similarity=0.156  Sum_probs=130.8

Q ss_pred             ChHHHHHHhcCcHH----HHHHHHhcCCCCCC----CCCCCCcHHHHHHHc---CcHHHHHHHHhCCCCCcc--------
Q psy11819        430 WTPLLVATLGNFTE----VVELLLEYKPNVNA----LDKDGCTALTIACKD---GYYEIAVLLLNSGAYINI--------  490 (651)
Q Consensus       430 ~t~l~~a~~~~~~~----~~~~Ll~~~~~~~~----~~~~g~t~l~~A~~~---~~~~~~~~Ll~~g~~~~~--------  490 (651)
                      +||||.|+..|+.+    ++++|+++|++++.    .+..|.||||+|+..   |+.+++++|+++|++++.        
T Consensus         3 ~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~   82 (256)
T 2etb_A            3 RDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQ   82 (256)
T ss_dssp             HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCC
T ss_pred             ccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccc
Confidence            34444444444443    33334444444444    444455555555554   555555555554444332        


Q ss_pred             ---cCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCC-------------CCCHHHHHHHcCCHHHHHHHHh---cC
Q psy11819        491 ---QDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKE-------------RKTAVYTAVEKGNVPILKLLLT---AN  551 (651)
Q Consensus       491 ---~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-------------g~t~l~~A~~~~~~~~v~~Ll~---~~  551 (651)
                         .+..|.||||+|+..|+.+++++|+++|++++..+..             |.||||+|+..|+.+++++|++   .|
T Consensus        83 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~g  162 (256)
T 2etb_A           83 CTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQP  162 (256)
T ss_dssp             CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred             cccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC
Confidence               1244566666666666666666666666666555554             8899999999999999999999   88


Q ss_pred             CCccccCCCCCcHHHHHHH--cCCHH-------HHHHHHHcCCCC-------cccCCCCCcHHHHHHHcCChHHHHHHHh
Q psy11819        552 PDLEIATKDGDTPLLKAVK--TRNLE-------AIQMLIDKKAKI-------TAVDKRGDTVLHIAMRARSKTIVEVFIR  615 (651)
Q Consensus       552 ~~~~~~~~~g~t~L~~A~~--~~~~~-------~v~~Ll~~ga~~-------~~~d~~g~t~l~~A~~~~~~~~~~~Ll~  615 (651)
                      ++++.+|..|+||||+|+.  .++.+       ++++|+++|+++       +.+|..|.||||+|+..|+.+++++|++
T Consensus       163 a~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~  242 (256)
T 2etb_A          163 ASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQ  242 (256)
T ss_dssp             CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             CCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHh
Confidence            9999999999999999998  77887       999999999888       8889999999999999999999999998


Q ss_pred             CCCC
Q psy11819        616 NPKN  619 (651)
Q Consensus       616 ~~~~  619 (651)
                      ++..
T Consensus       243 ~g~~  246 (256)
T 2etb_A          243 REFS  246 (256)
T ss_dssp             HHHH
T ss_pred             CCCC
Confidence            8754

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=100.00  E-value=7.2e-34  Score=267.29  Aligned_cols=209  Identities=19%  Similarity=0.189  Sum_probs=138.3

Q ss_pred             CcCcCCChHHHHHHhcCcHHHHHHHHh----cCCCCC----CCCCCCCcHHHHHHHc---CcHHHHHHHHhCCCCC----
Q psy11819        424 VAGLYCWTPLLVATLGNFTEVVELLLE----YKPNVN----ALDKDGCTALTIACKD---GYYEIAVLLLNSGAYI----  488 (651)
Q Consensus       424 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~----~~~~~~----~~~~~g~t~l~~A~~~---~~~~~~~~Ll~~g~~~----  488 (651)
                      ..+..+.||||.|+..|+.++++.|++    .+.+++    ..+..|.||||+|+..   |+.+++++|+++|+++    
T Consensus         8 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~   87 (273)
T 2pnn_A            8 PPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLK   87 (273)
T ss_dssp             ---CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHH
T ss_pred             CCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchh
Confidence            344445555555555555554444443    233332    2345556666666654   5566666666555431    


Q ss_pred             ---c----ccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCC--------------CCCCHHHHHHHcCCHHHHHHH
Q psy11819        489 ---N----IQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGK--------------ERKTAVYTAVEKGNVPILKLL  547 (651)
Q Consensus       489 ---~----~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~--------------~g~t~l~~A~~~~~~~~v~~L  547 (651)
                         +    ..+..|.||||+|+..|+.+++++|+++|++++..+.              .|.||||+|+..|+.+++++|
T Consensus        88 ~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L  167 (273)
T 2pnn_A           88 QFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL  167 (273)
T ss_dssp             HHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHH
T ss_pred             HHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence               1    1345667777777777777777777777777766665              788999999999999999999


Q ss_pred             Hh---cCCCccccCCCCCcHHHHHHHcCC---------HHHHHHHHHcCCCCc-------ccCCCCCcHHHHHHHcCChH
Q psy11819        548 LT---ANPDLEIATKDGDTPLLKAVKTRN---------LEAIQMLIDKKAKIT-------AVDKRGDTVLHIAMRARSKT  608 (651)
Q Consensus       548 l~---~~~~~~~~~~~g~t~L~~A~~~~~---------~~~v~~Ll~~ga~~~-------~~d~~g~t~l~~A~~~~~~~  608 (651)
                      ++   .|++++.+|..|+||||+|+..++         .+++++|+++|++++       .+|..|.||||+|+..|+.+
T Consensus       168 l~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~  247 (273)
T 2pnn_A          168 LQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIG  247 (273)
T ss_dssp             HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred             HhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHH
Confidence            99   888999999999999999998887         788999999988886       47888999999999999999


Q ss_pred             HHHHHHhCCCCcccccCCCCCCCCcc
Q psy11819        609 IVEVFIRNPKNNILLYRPNKAGETPY  634 (651)
Q Consensus       609 ~~~~Ll~~~~~~~~~~~~~~~g~t~l  634 (651)
                      ++++|+++|+..  .......+.+|.
T Consensus       248 iv~~Ll~~ga~d--p~~~~~~~~~~~  271 (273)
T 2pnn_A          248 VLAYILQREIHE--PECRHAAAHHHH  271 (273)
T ss_dssp             HHHHHHHHHTC---------------
T ss_pred             HHHHHHHCCCCC--chhhhhhhhhcc
Confidence            999999988831  333455555543

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=100.00  E-value=4.6e-33  Score=259.18  Aligned_cols=194  Identities=21%  Similarity=0.236  Sum_probs=181.3

Q ss_pred             CCChHHHHHHHcCCHH----HHHHHHHcCCCCCC----cCcCCChHHHHHHhc---CcHHHHHHHHhcCCCCCCC-----
Q psy11819        395 YGTTPLVWACRKGHVE----IVDILLKAGANVDV----AGLYCWTPLLVATLG---NFTEVVELLLEYKPNVNAL-----  458 (651)
Q Consensus       395 ~~~t~l~~A~~~~~~~----~v~~Ll~~~~~~~~----~~~~~~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~-----  458 (651)
                      +|+||||.|+..|+.+    ++++|++.|++++.    .+..|+||||+|+..   ++.+++++|+++|++++..     
T Consensus         1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~   80 (256)
T 2etb_A            1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN   80 (256)
T ss_dssp             CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence            3789999999999997    66788889999998    899999999999999   9999999999998876533     


Q ss_pred             ------CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCC-------------CCcHHHHHHhcCcHHHHHHHHh---
Q psy11819        459 ------DKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRS-------------GDSNLIHAVKGGHRGIVEALLK---  516 (651)
Q Consensus       459 ------~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-------------~~t~l~~A~~~~~~~~v~~Ll~---  516 (651)
                            +..|.||||+|+..|+.+++++|+++|++++..+..             |.||||+|+..|+.+++++|++   
T Consensus        81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~  160 (256)
T 2etb_A           81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH  160 (256)
T ss_dssp             CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred             cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence                  367999999999999999999999999999999886             9999999999999999999999   


Q ss_pred             cCCCCCCCCCCCCCHHHHHHH--cCCHH-------HHHHHHhcCCCc-------cccCCCCCcHHHHHHHcCCHHHHHHH
Q psy11819        517 KYVDVDIPGKERKTAVYTAVE--KGNVP-------ILKLLLTANPDL-------EIATKDGDTPLLKAVKTRNLEAIQML  580 (651)
Q Consensus       517 ~~~~~~~~~~~g~t~l~~A~~--~~~~~-------~v~~Ll~~~~~~-------~~~~~~g~t~L~~A~~~~~~~~v~~L  580 (651)
                      +|++++.+|..|.||||+|+.  .++.+       ++++|+++|+++       +.+|..|+||||+|+..|+.+++++|
T Consensus       161 ~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~L  240 (256)
T 2etb_A          161 QPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHI  240 (256)
T ss_dssp             CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             cCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHH
Confidence            999999999999999999999  88888       999999999999       99999999999999999999999999


Q ss_pred             HHcCCCCc
Q psy11819        581 IDKKAKIT  588 (651)
Q Consensus       581 l~~ga~~~  588 (651)
                      +++|++..
T Consensus       241 l~~g~~~~  248 (256)
T 2etb_A          241 LQREFSGA  248 (256)
T ss_dssp             HHHHHHHH
T ss_pred             HhCCCCCC
Confidence            99987654

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=100.00  E-value=4.3e-33  Score=262.01  Aligned_cols=208  Identities=20%  Similarity=0.227  Sum_probs=176.6

Q ss_pred             hhcCCCChHHHHHHHcCCHHHHHHHHH----cCCCCC----CcCcCCChHHHHHHhc---CcHHHHHHHHhcCCCC----
Q psy11819        391 MHLSYGTTPLVWACRKGHVEIVDILLK----AGANVD----VAGLYCWTPLLVATLG---NFTEVVELLLEYKPNV----  455 (651)
Q Consensus       391 ~~~~~~~t~l~~A~~~~~~~~v~~Ll~----~~~~~~----~~~~~~~t~l~~a~~~---~~~~~~~~Ll~~~~~~----  455 (651)
                      ..+..|.|+|+.|+..|+.++++.|++    .+.+++    ..+..|+||||+|+..   ++.+++++|+++|++.    
T Consensus         8 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~   87 (273)
T 2pnn_A            8 PPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLK   87 (273)
T ss_dssp             ---CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHH
T ss_pred             CCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchh
Confidence            355779999999999999998888886    566655    3478999999999986   9999999999997642    


Q ss_pred             ---C----CCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCC--------------CCCcHHHHHHhcCcHHHHHHH
Q psy11819        456 ---N----ALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDR--------------SGDSNLIHAVKGGHRGIVEAL  514 (651)
Q Consensus       456 ---~----~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~--------------~~~t~l~~A~~~~~~~~v~~L  514 (651)
                         +    ..+..|.||||+|+..|+.+++++|+++|++++..+.              .|.||||+|+..|+.+++++|
T Consensus        88 ~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L  167 (273)
T 2pnn_A           88 QFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL  167 (273)
T ss_dssp             HHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHH
T ss_pred             HHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence               2    2566899999999999999999999999999999987              799999999999999999999


Q ss_pred             Hh---cCCCCCCCCCCCCCHHHHHHHcCC---------HHHHHHHHhcCCCcc-------ccCCCCCcHHHHHHHcCCHH
Q psy11819        515 LK---KYVDVDIPGKERKTAVYTAVEKGN---------VPILKLLLTANPDLE-------IATKDGDTPLLKAVKTRNLE  575 (651)
Q Consensus       515 l~---~~~~~~~~~~~g~t~l~~A~~~~~---------~~~v~~Ll~~~~~~~-------~~~~~g~t~L~~A~~~~~~~  575 (651)
                      ++   +|++++.+|..|.||||+|+..++         .+++++|++.|++++       ..|..|+||||+|+..|+.+
T Consensus       168 l~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~  247 (273)
T 2pnn_A          168 LQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIG  247 (273)
T ss_dssp             HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred             HhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHH
Confidence            99   999999999999999999999998         899999999999986       58999999999999999999


Q ss_pred             HHHHHHHcCC-CCcccCCCCCcHH
Q psy11819        576 AIQMLIDKKA-KITAVDKRGDTVL  598 (651)
Q Consensus       576 ~v~~Ll~~ga-~~~~~d~~g~t~l  598 (651)
                      +|++|+++|+ ++......+.+|-
T Consensus       248 iv~~Ll~~ga~dp~~~~~~~~~~~  271 (273)
T 2pnn_A          248 VLAYILQREIHEPECRHAAAHHHH  271 (273)
T ss_dssp             HHHHHHHHHTC-------------
T ss_pred             HHHHHHHCCCCCchhhhhhhhhcc
Confidence            9999999999 8887776666654

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.98  E-value=4.8e-32  Score=253.06  Aligned_cols=130  Identities=22%  Similarity=0.204  Sum_probs=106.6

Q ss_pred             ccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCC--------------CCCCCHHHHHHHcCCHHHHHHHHh---cCC
Q psy11819        490 IQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPG--------------KERKTAVYTAVEKGNVPILKLLLT---ANP  552 (651)
Q Consensus       490 ~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~--------------~~g~t~l~~A~~~~~~~~v~~Ll~---~~~  552 (651)
                      ..+..|.||||+|+..|+.+++++|+++|++++..+              ..|.||||+|+..|+.+++++|++   .|+
T Consensus        88 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga  167 (260)
T 3jxi_A           88 DVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQA  167 (260)
T ss_dssp             CSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC
T ss_pred             ccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC
Confidence            334466667777777777777777777666666666              578899999999999999999999   888


Q ss_pred             CccccCCCCCcHHHHHHHcCC---------HHHHHHHHHcCCCC-------cccCCCCCcHHHHHHHcCChHHHHHHHhC
Q psy11819        553 DLEIATKDGDTPLLKAVKTRN---------LEAIQMLIDKKAKI-------TAVDKRGDTVLHIAMRARSKTIVEVFIRN  616 (651)
Q Consensus       553 ~~~~~~~~g~t~L~~A~~~~~---------~~~v~~Ll~~ga~~-------~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~  616 (651)
                      +++.+|..|+||||+|+..++         .+++++|+++|+++       +..|..|.||||+|+..|+.+++++|+++
T Consensus       168 ~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~  247 (260)
T 3jxi_A          168 DLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRR  247 (260)
T ss_dssp             CTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred             CCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence            999999999999999998777         68999999998888       67889999999999999999999999988


Q ss_pred             CCC
Q psy11819        617 PKN  619 (651)
Q Consensus       617 ~~~  619 (651)
                      +..
T Consensus       248 g~~  250 (260)
T 3jxi_A          248 EIA  250 (260)
T ss_dssp             HHH
T ss_pred             CCC
Confidence            865

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.97  E-value=1.3e-31  Score=250.90  Aligned_cols=189  Identities=22%  Similarity=0.297  Sum_probs=178.0

Q ss_pred             ChHHHHHHhcCcHHHHHHHHhcCCC--CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCC-CCcccCCCCCcHHHHHH---
Q psy11819        430 WTPLLVATLGNFTEVVELLLEYKPN--VNALDKDGCTALTIACKDGYYEIAVLLLNSGA-YINIQDRSGDSNLIHAV---  503 (651)
Q Consensus       430 ~t~l~~a~~~~~~~~~~~Ll~~~~~--~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~~~t~l~~A~---  503 (651)
                      .++++.|+..+..+.++.+++.+.+  ++..|..|.||||+|+..|+.+++++|++.|+ +++..+..|.|||+.|+   
T Consensus        77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~  156 (276)
T 4hbd_A           77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALAT  156 (276)
T ss_dssp             STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCC
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHH
Confidence            4678888888999999998887665  78889999999999999999999999999998 99999999999999999   


Q ss_pred             --hcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy11819        504 --KGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLI  581 (651)
Q Consensus       504 --~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll  581 (651)
                        ..++.+++++|++.|...+..+..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.++|++|+
T Consensus       157 ~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll  236 (276)
T 4hbd_A          157 LKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLL  236 (276)
T ss_dssp             CCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Confidence              678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             H-cCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCC
Q psy11819        582 D-KKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK  618 (651)
Q Consensus       582 ~-~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~  618 (651)
                      + .|++++.+|..|.||||+|+..|+.+++++|+++..
T Consensus       237 ~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~  274 (276)
T 4hbd_A          237 AVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMN  274 (276)
T ss_dssp             TSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred             hcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence            9 899999999999999999999999999999998764

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.97  E-value=5e-31  Score=233.40  Aligned_cols=163  Identities=26%  Similarity=0.283  Sum_probs=153.8

Q ss_pred             CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHH
Q psy11819        455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYT  534 (651)
Q Consensus       455 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~  534 (651)
                      ++.+|..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+
T Consensus        28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~  107 (192)
T 2rfm_A           28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMW  107 (192)
T ss_dssp             HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred             HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence            35578889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHH
Q psy11819        535 AVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI  614 (651)
Q Consensus       535 A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll  614 (651)
                      |+..++.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|+
T Consensus       108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll  187 (192)
T 2rfm_A          108 SIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT  187 (192)
T ss_dssp             HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCC
Q psy11819        615 RNP  617 (651)
Q Consensus       615 ~~~  617 (651)
                      +.+
T Consensus       188 ~~~  190 (192)
T 2rfm_A          188 EVR  190 (192)
T ss_dssp             HHH
T ss_pred             hcc
Confidence            864

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.97  E-value=3.9e-31  Score=229.56  Aligned_cols=169  Identities=26%  Similarity=0.332  Sum_probs=143.6

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCCCC-CcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC
Q psy11819        462 GCTALTIACKDGYYEIAVLLLNSGAY-INIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGN  540 (651)
Q Consensus       462 g~t~l~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~  540 (651)
                      +.||||.|+..|+.+++++|++.+.+ ++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..++
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   81 (172)
T 3v30_A            2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY   81 (172)
T ss_dssp             --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred             chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence            45788999999999999999888877 77788888999999999999999999999999998888899999999999999


Q ss_pred             HHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCc
Q psy11819        541 VPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNN  620 (651)
Q Consensus       541 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~  620 (651)
                      .+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++++.. 
T Consensus        82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~-  160 (172)
T 3v30_A           82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILK-  160 (172)
T ss_dssp             HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHH-
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999998887 


Q ss_pred             ccccCCCCCCCCc
Q psy11819        621 ILLYRPNKAGETP  633 (651)
Q Consensus       621 ~~~~~~~~~g~t~  633 (651)
                        +..+|..|.||
T Consensus       161 --~~~~~~~~~~p  171 (172)
T 3v30_A          161 --LFQSNLVPADP  171 (172)
T ss_dssp             --HSCC-------
T ss_pred             --HhcccCCCCCC
Confidence              66678888776

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.97  E-value=2.7e-31  Score=247.99  Aligned_cols=195  Identities=22%  Similarity=0.224  Sum_probs=177.1

Q ss_pred             CCCChHHHHHHHcCCHHH----HHHHHHcCCCCCCcC----cCCChHHHHHH---hcCcHHHHHHHHhcCCC--------
Q psy11819        394 SYGTTPLVWACRKGHVEI----VDILLKAGANVDVAG----LYCWTPLLVAT---LGNFTEVVELLLEYKPN--------  454 (651)
Q Consensus       394 ~~~~t~l~~A~~~~~~~~----v~~Ll~~~~~~~~~~----~~~~t~l~~a~---~~~~~~~~~~Ll~~~~~--------  454 (651)
                      .+++++|+.|+..|+.+.    +++|.+.|.+++..+    ..|+||||+|+   ..++.+++++|++.|++        
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~   82 (260)
T 3jxi_A            3 VFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFI   82 (260)
T ss_dssp             CCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHH
T ss_pred             cchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhh
Confidence            458899999999999995    555555899988766    66999999999   67999999999998743        


Q ss_pred             ---CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccC--------------CCCCcHHHHHHhcCcHHHHHHHHh-
Q psy11819        455 ---VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD--------------RSGDSNLIHAVKGGHRGIVEALLK-  516 (651)
Q Consensus       455 ---~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~--------------~~~~t~l~~A~~~~~~~~v~~Ll~-  516 (651)
                         ++..+..|.||||+|+..|+.+++++|+++|++++..+              ..|.||||+|+..|+.+++++|++ 
T Consensus        83 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~  162 (260)
T 3jxi_A           83 NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN  162 (260)
T ss_dssp             TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred             cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence               44455589999999999999999999999999999998              689999999999999999999999 


Q ss_pred             --cCCCCCCCCCCCCCHHHHHHHcCC---------HHHHHHHHhcCCCc-------cccCCCCCcHHHHHHHcCCHHHHH
Q psy11819        517 --KYVDVDIPGKERKTAVYTAVEKGN---------VPILKLLLTANPDL-------EIATKDGDTPLLKAVKTRNLEAIQ  578 (651)
Q Consensus       517 --~~~~~~~~~~~g~t~l~~A~~~~~---------~~~v~~Ll~~~~~~-------~~~~~~g~t~L~~A~~~~~~~~v~  578 (651)
                        +|++++.+|..|.||||+|+..++         .+++++|+++|+++       +..|..|+||||+|+..|+.++|+
T Consensus       163 ~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~  242 (260)
T 3jxi_A          163 GHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQ  242 (260)
T ss_dssp             SSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             cccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHH
Confidence              999999999999999999999888         79999999999998       789999999999999999999999


Q ss_pred             HHHHcCCCCc
Q psy11819        579 MLIDKKAKIT  588 (651)
Q Consensus       579 ~Ll~~ga~~~  588 (651)
                      +|+++|++..
T Consensus       243 ~Ll~~g~~~~  252 (260)
T 3jxi_A          243 HIIRREIADA  252 (260)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHhCCCcc
Confidence            9999987654

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.97  E-value=4.9e-30  Score=221.49  Aligned_cols=158  Identities=29%  Similarity=0.380  Sum_probs=141.2

Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC
Q psy11819        460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKG  539 (651)
Q Consensus       460 ~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~  539 (651)
                      ..+.++++.|++.|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus        12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   91 (169)
T 2y1l_E           12 SDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFG   91 (169)
T ss_dssp             -CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence            34567889999999999999999999888888888999999999999999999999998888888889999999999999


Q ss_pred             CHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCC
Q psy11819        540 NVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNP  617 (651)
Q Consensus       540 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~  617 (651)
                      +.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|++.|
T Consensus        92 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G  169 (169)
T 2y1l_E           92 HLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN  169 (169)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred             CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999998765

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.97  E-value=3.1e-30  Score=222.70  Aligned_cols=159  Identities=25%  Similarity=0.326  Sum_probs=144.9

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC
Q psy11819        461 DGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGN  540 (651)
Q Consensus       461 ~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~  540 (651)
                      .|.||||.|+..|+.+++++|++.|.+++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..++
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   81 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY   81 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence            47789999999999999999999998888889999999999999999999999999999999889999999999999999


Q ss_pred             HHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCC
Q psy11819        541 VPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKN  619 (651)
Q Consensus       541 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~  619 (651)
                      .+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|++++..
T Consensus        82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~  160 (167)
T 3v31_A           82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK  160 (167)
T ss_dssp             HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999987654

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.97  E-value=2.8e-30  Score=221.86  Aligned_cols=158  Identities=23%  Similarity=0.303  Sum_probs=134.6

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC
Q psy11819        461 DGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGN  540 (651)
Q Consensus       461 ~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~  540 (651)
                      ...|||+.|+..|+.+++++|+++|++++..+..|.||||.|+. |+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus         4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   82 (162)
T 1ihb_A            4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF   82 (162)
T ss_dssp             -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred             hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence            34578888888888888888888888888888888888888888 88888888888888888888888888888888888


Q ss_pred             HHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCcHHHHHHHcCChHHHHHHHhCCCC
Q psy11819        541 VPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAK-ITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKN  619 (651)
Q Consensus       541 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~  619 (651)
                      .+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..++.+++++|+++|++
T Consensus        83 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd  162 (162)
T 1ihb_A           83 LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG  162 (162)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred             HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence            8888888888888888888888888888888888888888888887 588888888888888888888888888888763

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.97  E-value=4.6e-30  Score=222.78  Aligned_cols=168  Identities=26%  Similarity=0.226  Sum_probs=149.9

Q ss_pred             ChHHHHHHhcCcHHHHHHHHhcCCC-CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcH
Q psy11819        430 WTPLLVATLGNFTEVVELLLEYKPN-VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHR  508 (651)
Q Consensus       430 ~t~l~~a~~~~~~~~~~~Ll~~~~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~  508 (651)
                      .+||+.|+..++.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.
T Consensus         3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~   82 (172)
T 3v30_A            3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYT   82 (172)
T ss_dssp             -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred             hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCH
Confidence            5788899999999999999988876 788888999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc
Q psy11819        509 GIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKIT  588 (651)
Q Consensus       509 ~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~  588 (651)
                      +++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|+++.
T Consensus        83 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~  162 (172)
T 3v30_A           83 DIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLF  162 (172)
T ss_dssp             HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             ccCCCCCcH
Q psy11819        589 AVDKRGDTV  597 (651)
Q Consensus       589 ~~d~~g~t~  597 (651)
                      ..+..|.||
T Consensus       163 ~~~~~~~~p  171 (172)
T 3v30_A          163 QSNLVPADP  171 (172)
T ss_dssp             CC-------
T ss_pred             cccCCCCCC
Confidence            888888776

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.97  E-value=5.7e-32  Score=244.87  Aligned_cols=200  Identities=16%  Similarity=0.120  Sum_probs=167.7

Q ss_pred             HHHHHhcCCCCCCCC---CCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCC
Q psy11819        445 VELLLEYKPNVNALD---KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDV  521 (651)
Q Consensus       445 ~~~Ll~~~~~~~~~~---~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~  521 (651)
                      ++.|+++|++++..+   ..+.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|+++
T Consensus         1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~   80 (229)
T 2vge_A            1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV   80 (229)
T ss_dssp             ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred             CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence            356777777766544   35557899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccC-CCCCcHHHHH--HHcCCHHHHHHHHHcCCCCcccCCCCCcHH
Q psy11819        522 DIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT-KDGDTPLLKA--VKTRNLEAIQMLIDKKAKITAVDKRGDTVL  598 (651)
Q Consensus       522 ~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A--~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l  598 (651)
                      +..|..|.||||+|+..|+.+++++|++.|++++..+ ..|+||||+|  +..|+.+++++|++.|++++..|..|.||+
T Consensus        81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l  160 (229)
T 2vge_A           81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYAL  160 (229)
T ss_dssp             TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEES
T ss_pred             CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHH
Confidence            9999999999999999999999999999999999886 6999999999  999999999999999999999999999999


Q ss_pred             HHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccccchhhhhc
Q psy11819        599 HIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQE  648 (651)
Q Consensus       599 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~  648 (651)
                      +.++....   .++|++.+++ ..++.+|..|+||||+|+..|+..+++.
T Consensus       161 ~~~~~~~~---~~~ll~~ga~-~~~~~~d~~G~TpL~~A~~~g~~~~v~~  206 (229)
T 2vge_A          161 WDYSAEFG---DELSFREGES-VTVLRRDGPEETDWWWAALHGQEGYVPR  206 (229)
T ss_dssp             SCBCCSST---TBCCBCTTCE-EEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred             HHHhhccc---cccCcccccc-ccccccCCCcccHHHHHHHcCCcceeeh
Confidence            86655443   3577777764 2256789999999999999999887764

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.97  E-value=1.3e-29  Score=214.82  Aligned_cols=150  Identities=25%  Similarity=0.295  Sum_probs=134.1

Q ss_pred             CcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHH
Q psy11819        463 CTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVP  542 (651)
Q Consensus       463 ~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~  542 (651)
                      .|+|+.|++.|+.+++++|++.|++++ .+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+
T Consensus         3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~   81 (153)
T 1awc_B            3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN   81 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred             cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence            478888888899999999988888776 5778889999999999999999999988888888888999999999999999


Q ss_pred             HHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHH
Q psy11819        543 ILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVF  613 (651)
Q Consensus       543 ~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~L  613 (651)
                      ++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|
T Consensus        82 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B           82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999998886

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.97  E-value=3.1e-30  Score=241.51  Aligned_cols=189  Identities=23%  Similarity=0.284  Sum_probs=180.3

Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCCC--CCCcCcCCChHHHHHHhcCcHHHHHHHHhcCC-CCCCCCCCCCcHHHHHH--
Q psy11819        396 GTTPLVWACRKGHVEIVDILLKAGAN--VDVAGLYCWTPLLVATLGNFTEVVELLLEYKP-NVNALDKDGCTALTIAC--  470 (651)
Q Consensus       396 ~~t~l~~A~~~~~~~~v~~Ll~~~~~--~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~-~~~~~~~~g~t~l~~A~--  470 (651)
                      ..++++.|+..++.+.++.+++.+.+  ++..+..|+||||+|+..++.+++++|++.|+ +++..+..|.||||+|+  
T Consensus        76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~  155 (276)
T 4hbd_A           76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALA  155 (276)
T ss_dssp             HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGC
T ss_pred             hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHH
Confidence            46788899999999999999887665  78899999999999999999999999999998 99999999999999999  


Q ss_pred             ---HcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q psy11819        471 ---KDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLL  547 (651)
Q Consensus       471 ---~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L  547 (651)
                         ..++.+++++|++.|.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus       156 ~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~L  235 (276)
T 4hbd_A          156 TLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLL  235 (276)
T ss_dssp             CCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred             HhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Confidence               67889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hh-cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q psy11819        548 LT-ANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK  584 (651)
Q Consensus       548 l~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g  584 (651)
                      ++ .|++++..|..|+||||+|+..|+.+++++|++++
T Consensus       236 l~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~  273 (276)
T 4hbd_A          236 LAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM  273 (276)
T ss_dssp             HTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred             HhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence            99 89999999999999999999999999999999874

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.97  E-value=1e-29  Score=225.01  Aligned_cols=163  Identities=26%  Similarity=0.305  Sum_probs=153.0

Q ss_pred             CCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHH
Q psy11819        422 VDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIH  501 (651)
Q Consensus       422 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~  501 (651)
                      ++.++..|+||||.|+..++.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||.
T Consensus        28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~  107 (192)
T 2rfm_A           28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMW  107 (192)
T ss_dssp             HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred             HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence            35677888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy11819        502 AVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLI  581 (651)
Q Consensus       502 A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll  581 (651)
                      |+..++.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..|..|.|||++|+..|+.+++++|+
T Consensus       108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll  187 (192)
T 2rfm_A          108 SIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT  187 (192)
T ss_dssp             HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcC
Q psy11819        582 DKK  584 (651)
Q Consensus       582 ~~g  584 (651)
                      +.|
T Consensus       188 ~~~  190 (192)
T 2rfm_A          188 EVR  190 (192)
T ss_dssp             HHH
T ss_pred             hcc
Confidence            864

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.97  E-value=1.6e-29  Score=217.13  Aligned_cols=157  Identities=26%  Similarity=0.276  Sum_probs=140.4

Q ss_pred             CChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcH
Q psy11819        429 CWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHR  508 (651)
Q Consensus       429 ~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~  508 (651)
                      ..+||+.|+..++.+++++|+++|++++..+..|.||||+|+. |+.+++++|+++|++++..+..|.||||.|+..++.
T Consensus         5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~   83 (162)
T 1ihb_A            5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFL   83 (162)
T ss_dssp             CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred             HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence            4578888888888888888888888888888889999999888 899999999999999998888999999999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy11819        509 GIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPD-LEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAK  586 (651)
Q Consensus       509 ~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  586 (651)
                      +++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|+++||+
T Consensus        84 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd  162 (162)
T 1ihb_A           84 DTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG  162 (162)
T ss_dssp             HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred             HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence            999999999999999999999999999999999999999999997 588999999999999999999999999999885

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.97  E-value=3.7e-29  Score=216.01  Aligned_cols=158  Identities=30%  Similarity=0.340  Sum_probs=136.2

Q ss_pred             cCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcC
Q psy11819        427 LYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGG  506 (651)
Q Consensus       427 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~  506 (651)
                      ..+.++++.|+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||.|+..+
T Consensus        12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   91 (169)
T 2y1l_E           12 SDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFG   91 (169)
T ss_dssp             -CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence            34567888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             cHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q psy11819        507 HRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK  584 (651)
Q Consensus       507 ~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g  584 (651)
                      +.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++..|..|.|||++|+..|+.+++++|++.|
T Consensus        92 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G  169 (169)
T 2y1l_E           92 HLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN  169 (169)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred             CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence            888888888888888888888899999999999999999999999999888889999999999999999999998865

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.96  E-value=6.7e-33  Score=267.60  Aligned_cols=150  Identities=15%  Similarity=0.163  Sum_probs=98.1

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCC---cccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC---CCCCCCCchHHHHHH
Q psy11819        158 GTALMFAAQKGKLSFVRELVTRGADV---NAEDNDNWSPLTYAAREGYTDVCAELLDHGADL---EHRDMGGWSPLMWAS  231 (651)
Q Consensus       158 ~t~l~~A~~~g~~~~v~~Ll~~~~~~---~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~---~~~~~~~~t~L~~A~  231 (651)
                      +||||+|+..|+.++|++|++.|+..   +..+..+.||||+|+..|+.+++++|+++|+++   +..+.+ .||||+|+
T Consensus        93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa  171 (376)
T 2aja_A           93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAA  171 (376)
T ss_dssp             HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHH
Confidence            46777777777777777777766521   122334566777777777777777777777542   212222 67777777


Q ss_pred             HcCCHHHHHHHHhcCCCCCC--cCCCCCcHHHHHH-hcChHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Q psy11819        232 YKGHTDTVALLLDKNADVNA--HGNYHISSLIWAA-GRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDI  308 (651)
Q Consensus       232 ~~~~~~~v~~Ll~~~~~~~~--~~~~~~t~L~~a~-~~~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~  308 (651)
                      ..|+.+++++|+++|++++.  .+..|.|||++|+ ..|+.+++++|++.|.        .+.||+++|+..|+.+++++
T Consensus       172 ~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~~Aa~~g~~evv~l  243 (376)
T 2aja_A          172 ENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--------MLAYAEIHEFEYGEKYVNPF  243 (376)
T ss_dssp             HTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------HHHHHHHCTTTTTTTTHHHH
T ss_pred             HCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------ccchHHHHHHHCCCHHHHHH
Confidence            77777777777777776655  5566667777777 7777777777776553        25677777777777777777


Q ss_pred             HHHcCCCc
Q psy11819        309 LLKAGANV  316 (651)
Q Consensus       309 Ll~~~~~~  316 (651)
                      |+++|+++
T Consensus       244 L~~~ga~~  251 (376)
T 2aja_A          244 IARHVNRL  251 (376)
T ss_dssp             HHHHHHHH
T ss_pred             HHhcCccc
Confidence            77776554

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.96  E-value=7.9e-29  Score=213.82  Aligned_cols=160  Identities=24%  Similarity=0.213  Sum_probs=149.6

Q ss_pred             CCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCc
Q psy11819        428 YCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGH  507 (651)
Q Consensus       428 ~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~  507 (651)
                      .+.||||.|+..|+.+++++|++.+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||.|+..++
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   81 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY   81 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q psy11819        508 RGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKI  587 (651)
Q Consensus       508 ~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~  587 (651)
                      .+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++++++
T Consensus        82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~  161 (167)
T 3v31_A           82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKL  161 (167)
T ss_dssp             HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999887653

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.96  E-value=4.3e-29  Score=218.01  Aligned_cols=160  Identities=20%  Similarity=0.253  Sum_probs=128.6

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhC-CCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC
Q psy11819        461 DGCTALTIACKDGYYEIAVLLLNS-GAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKG  539 (651)
Q Consensus       461 ~g~t~l~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~  539 (651)
                      ++.++|+.|+..|+.+++++|++. +.+++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus         4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   83 (179)
T 3f6q_A            4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHG   83 (179)
T ss_dssp             ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence            456778888888888888888877 5667777778888888888888888888888888888888888888888888888


Q ss_pred             CHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCC
Q psy11819        540 NVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKN  619 (651)
Q Consensus       540 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~  619 (651)
                      +.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..|..|.|||++|+..++.+++++|++.+++
T Consensus        84 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~  163 (179)
T 3f6q_A           84 HRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQN  163 (179)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcC
Confidence            88888888888888888888888888888888888888888888888888888888888888888888888888888877


Q ss_pred             c
Q psy11819        620 N  620 (651)
Q Consensus       620 ~  620 (651)
                      .
T Consensus       164 ~  164 (179)
T 3f6q_A          164 L  164 (179)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.96  E-value=3.1e-32  Score=246.62  Aligned_cols=199  Identities=19%  Similarity=0.131  Sum_probs=174.5

Q ss_pred             HHHHHHcCCCCCCc---CcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q psy11819        412 VDILLKAGANVDVA---GLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYI  488 (651)
Q Consensus       412 v~~Ll~~~~~~~~~---~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~  488 (651)
                      ++.|+++|.+++..   +..+.|||+.|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|+++
T Consensus         1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~   80 (229)
T 2vge_A            1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV   80 (229)
T ss_dssp             ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred             CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence            46788888887654   456678899999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCC-CCCCCHHHHH--HHcCCHHHHHHHHhcCCCccccCCCCCcHH
Q psy11819        489 NIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPG-KERKTAVYTA--VEKGNVPILKLLLTANPDLEIATKDGDTPL  565 (651)
Q Consensus       489 ~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~g~t~l~~A--~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L  565 (651)
                      +..|..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|  +..|+.+++++|++.|++++..+..|.||+
T Consensus        81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l  160 (229)
T 2vge_A           81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYAL  160 (229)
T ss_dssp             TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEES
T ss_pred             CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHH
Confidence            9999999999999999999999999999999999986 6999999999  999999999999999999999999999999


Q ss_pred             HHHHHcCCHHHHHHHHHcCCC--CcccCCCCCcHHHHHHHcCChHHHHHH
Q psy11819        566 LKAVKTRNLEAIQMLIDKKAK--ITAVDKRGDTVLHIAMRARSKTIVEVF  613 (651)
Q Consensus       566 ~~A~~~~~~~~v~~Ll~~ga~--~~~~d~~g~t~l~~A~~~~~~~~~~~L  613 (651)
                      +.++..+.   +++|++.|++  ++.+|..|+||||+|+..|+.++|+.+
T Consensus       161 ~~~~~~~~---~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~  207 (229)
T 2vge_A          161 WDYSAEFG---DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRN  207 (229)
T ss_dssp             SCBCCSST---TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGG
T ss_pred             HHHhhccc---cccCccccccccccccCCCcccHHHHHHHcCCcceeehh
Confidence            96555443   3688899998  677899999999999999999998753

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.96  E-value=2.3e-29  Score=216.75  Aligned_cols=159  Identities=20%  Similarity=0.201  Sum_probs=131.1

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHh-CCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Q psy11819        459 DKDGCTALTIACKDGYYEIAVLLLN-SGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVE  537 (651)
Q Consensus       459 ~~~g~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~  537 (651)
                      +.++.|+|+.|++.|+.+++++|++ .+.+++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+.
T Consensus         5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~   84 (165)
T 3twr_A            5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS   84 (165)
T ss_dssp             -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence            4566788888888888888888887 455666677778888888888888888888888888888888888888888888


Q ss_pred             cCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCC
Q psy11819        538 KGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNP  617 (651)
Q Consensus       538 ~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~  617 (651)
                      .++.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|.. ++.+++++|+++|
T Consensus        85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~g  163 (165)
T 3twr_A           85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDA  163 (165)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC-
T ss_pred             cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhcc
Confidence            888888888888888888888888888888888888888888888888888888888888888766 7888888888876


Q ss_pred             C
Q psy11819        618 K  618 (651)
Q Consensus       618 ~  618 (651)
                      +
T Consensus       164 A  164 (165)
T 3twr_A          164 A  164 (165)
T ss_dssp             -
T ss_pred             c
Confidence            4

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.96  E-value=3.3e-32  Score=262.76  Aligned_cols=234  Identities=15%  Similarity=0.126  Sum_probs=171.9

Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCCCC---CCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCC---CCCCCCCCcHHHHH
Q psy11819        396 GTTPLVWACRKGHVEIVDILLKAGANV---DVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV---NALDKDGCTALTIA  469 (651)
Q Consensus       396 ~~t~l~~A~~~~~~~~v~~Ll~~~~~~---~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~---~~~~~~g~t~l~~A  469 (651)
                      +.||||.|+..|+.+++++|++.|...   +..+..+.||||.|+..|+.+++++|+++|+++   +..+.+ .||||+|
T Consensus        92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~A  170 (376)
T 2aja_A           92 SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLA  170 (376)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHH
T ss_pred             cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHH
Confidence            349999999999999999999998732   234456789999999999999999999999752   222223 8999999


Q ss_pred             HHcCcHHHHHHHHhCCCCCcc--cCCCCCcHHHHHH-hcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Q psy11819        470 CKDGYYEIAVLLLNSGAYINI--QDRSGDSNLIHAV-KGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKL  546 (651)
Q Consensus       470 ~~~~~~~~~~~Ll~~g~~~~~--~~~~~~t~l~~A~-~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~  546 (651)
                      +..|+.+++++|+++|++++.  .+..|.||||.|+ ..|+.+++++|+++|.       .|.|||++|+..|+.+++++
T Consensus       171 a~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~l  243 (376)
T 2aja_A          171 AENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVNPF  243 (376)
T ss_dssp             HHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHH
T ss_pred             HHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHHHH
Confidence            999999999999999999887  8888999999999 9999999999999763       37899999999999999999


Q ss_pred             HHhcCCCccccCCCCCcHHHHHHHcCC---------------------------HHHHHHHHHcCC-----CCcccCCCC
Q psy11819        547 LLTANPDLEIATKDGDTPLLKAVKTRN---------------------------LEAIQMLIDKKA-----KITAVDKRG  594 (651)
Q Consensus       547 Ll~~~~~~~~~~~~g~t~L~~A~~~~~---------------------------~~~v~~Ll~~ga-----~~~~~d~~g  594 (651)
                      |++.|++++..+.    +++.|+.+|+                           .+.+++|++.++     +.......+
T Consensus       244 L~~~ga~~~~~~~----~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~  319 (376)
T 2aja_A          244 IARHVNRLKEMHD----AFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDA  319 (376)
T ss_dssp             HHHHHHHHHHHHT----TTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCC
T ss_pred             HHhcCcccccccH----HHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCc
Confidence            9999987765432    3333333333                           445566665321     112223457


Q ss_pred             CcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccccchhhhh
Q psy11819        595 DTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQ  647 (651)
Q Consensus       595 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~  647 (651)
                      .|||++|+..|+.+++++|++.+..      ++..|+||+.+|-..|...+++
T Consensus       320 ~~~L~~A~~~g~~e~v~lLl~~~~v------~~~~~~~~~~~~~~~~~~~~~~  366 (376)
T 2aja_A          320 NELLRLALRLGNQGACALLLSIPSV------LALTKANNYYINETGGRLDLRA  366 (376)
T ss_dssp             CHHHHHHHHHTCTTHHHHHTTSHHH------HHSCC-----------------
T ss_pred             cHHHHHHHHcCcHHHHHHHHcChHH------HHHHHHhccccccccccccHHH
Confidence            7999999999999999999987644      7889999999999988876654

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.96  E-value=8.2e-30  Score=233.58  Aligned_cols=183  Identities=17%  Similarity=0.186  Sum_probs=125.3

Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC
Q psy11819        460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKG  539 (651)
Q Consensus       460 ~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~  539 (651)
                      ..|.||||.|++.++.+.++.|+++|++++.. ..+.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus         3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g   81 (239)
T 1ycs_B            3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG   81 (239)
T ss_dssp             -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred             ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence            35788888888888888888888888888754 66788888888888888888888888888888888888888888888


Q ss_pred             CHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC-cHHHHH--HHcCChHHHHHHHhC
Q psy11819        540 NVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGD-TVLHIA--MRARSKTIVEVFIRN  616 (651)
Q Consensus       540 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~-t~l~~A--~~~~~~~~~~~Ll~~  616 (651)
                      +.+++++|+++|++++..|..|+||||+|+..|+.++|++|+++|++++..|..|. ||||+|  +..|+.+++++|+++
T Consensus        82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~  161 (239)
T 1ycs_B           82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  161 (239)
T ss_dssp             CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHh
Confidence            88888888888888888888888899988888888888988888888888887777 888888  778888888888888


Q ss_pred             CCCccccc------CCCCCCCCcccccccccch
Q psy11819        617 PKNNILLY------RPNKAGETPYSIDMNNQKS  643 (651)
Q Consensus       617 ~~~~~~~~------~~~~~g~t~l~~a~~~~~~  643 (651)
                      +++....+      ..+..|++|++++.+.|..
T Consensus       162 ~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~~  194 (239)
T 1ycs_B          162 QEKMGIMNKGVIYALWDYEPQNDDELPMKEGDC  194 (239)
T ss_dssp             HHHTTTTGGGEEEESSCBCCSSTTBCCBCSSCE
T ss_pred             hhcccccccceEEEEeccCCCCCCcccccCCCE
Confidence            77633221      2377788999999888863

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.96  E-value=1.4e-28  Score=209.67  Aligned_cols=153  Identities=21%  Similarity=0.280  Sum_probs=138.5

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhC-CCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC
Q psy11819        462 GCTALTIACKDGYYEIAVLLLNS-GAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGN  540 (651)
Q Consensus       462 g~t~l~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~  540 (651)
                      +.|+|+.|+..|+.+++++|++. +.+++..+..|.||||. +..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   80 (156)
T 1bd8_A            2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF   80 (156)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence            45789999999999999999988 44888888899999999 88899999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhC
Q psy11819        541 VPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN  616 (651)
Q Consensus       541 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~  616 (651)
                      .+++++|++.|++++..|..|+||||+|+..|+.+++++|++. ++++..|..|.||||+|+..++.+++++|+++
T Consensus        81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  155 (156)
T 1bd8_A           81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence            9999999999999999999999999999999999999999998 99999999999999999999999999999875

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.96  E-value=1.5e-28  Score=214.62  Aligned_cols=167  Identities=22%  Similarity=0.279  Sum_probs=151.6

Q ss_pred             CCChHHHHHHhcCcHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcC
Q psy11819        428 YCWTPLLVATLGNFTEVVELLLEY-KPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGG  506 (651)
Q Consensus       428 ~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~  506 (651)
                      .+.++|+.|+..++.+++++|++. +.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..+
T Consensus         4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   83 (179)
T 3f6q_A            4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHG   83 (179)
T ss_dssp             ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence            456788999999999999999887 5678888899999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy11819        507 HRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAK  586 (651)
Q Consensus       507 ~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  586 (651)
                      +.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++..+..|.|||++|+..++.+++++|++.|++
T Consensus        84 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~  163 (179)
T 3f6q_A           84 HRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQN  163 (179)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccCCCC
Q psy11819        587 ITAVDKRG  594 (651)
Q Consensus       587 ~~~~d~~g  594 (651)
                      ++..+..+
T Consensus       164 ~~~~~~~~  171 (179)
T 3f6q_A          164 LNRIPYKD  171 (179)
T ss_dssp             CSCBCCCC
T ss_pred             cccCCccc
Confidence            98776543

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.96  E-value=3.7e-28  Score=205.94  Aligned_cols=150  Identities=24%  Similarity=0.292  Sum_probs=136.5

Q ss_pred             ChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHH
Q psy11819        430 WTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRG  509 (651)
Q Consensus       430 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~  509 (651)
                      .++|+.|+..|+.+++++|+++|++++ .+..|.||||.|+..|+.+++++|+++|++++..+..|.||||.|+..++.+
T Consensus         3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~   81 (153)
T 1awc_B            3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN   81 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred             cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence            478888888888888888888888765 4778899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHH
Q psy11819        510 IVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQML  580 (651)
Q Consensus       510 ~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L  580 (651)
                      ++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.|||++|+..|+.+++++|
T Consensus        82 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B           82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.96  E-value=1.9e-30  Score=237.77  Aligned_cols=212  Identities=16%  Similarity=0.124  Sum_probs=153.0

Q ss_pred             cCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcC
Q psy11819        427 LYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGG  506 (651)
Q Consensus       427 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~  506 (651)
                      ..|.|||+.|+..+..+.++.|+++|++++.. ..|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus         3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g   81 (239)
T 1ycs_B            3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG   81 (239)
T ss_dssp             -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred             ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence            45788999999999999999999999888754 67889999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCC-cHHHHH--HHcCCHHHHHHHHHc
Q psy11819        507 HRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGD-TPLLKA--VKTRNLEAIQMLIDK  583 (651)
Q Consensus       507 ~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~-t~L~~A--~~~~~~~~v~~Ll~~  583 (651)
                      +.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+..|. ||||+|  +..|+.+++++|++.
T Consensus        82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~  161 (239)
T 1ycs_B           82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  161 (239)
T ss_dssp             CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999998877 999999  788999999999999


Q ss_pred             CCCCccc---------CCCCCcHHHHHHHcCChHHHHHHHhCCCCc---ccccCCCCCCCCccccccccc
Q psy11819        584 KAKITAV---------DKRGDTVLHIAMRARSKTIVEVFIRNPKNN---ILLYRPNKAGETPYSIDMNNQ  641 (651)
Q Consensus       584 ga~~~~~---------d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~---~~~~~~~~~g~t~l~~a~~~~  641 (651)
                      |++++..         +..+.+++++|.+.|.  +++.|.+.+..+   -.....+..|.+|.++.-..+
T Consensus       162 ~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~~~~~~~~Ww~~~~~~~~G~~P~~yv~~~~  229 (239)
T 1ycs_B          162 QEKMGIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGLYP  229 (239)
T ss_dssp             HHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCCCTTSCSSEEEEEETTEEEEEEGGGEECCC
T ss_pred             hhcccccccceEEEEeccCCCCCCcccccCCC--EEEEEEecCCCCCCEEEEEECCcEEEeehHHeeECC
Confidence            9888776         5668889888888776  455555544331   011246778889988876554

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.96  E-value=3.1e-28  Score=209.57  Aligned_cols=159  Identities=26%  Similarity=0.262  Sum_probs=141.0

Q ss_pred             CcCCChHHHHHHhcCcHHHHHHHHh-cCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHh
Q psy11819        426 GLYCWTPLLVATLGNFTEVVELLLE-YKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVK  504 (651)
Q Consensus       426 ~~~~~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~  504 (651)
                      +..+.++|+.|+..++.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+.
T Consensus         5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~   84 (165)
T 3twr_A            5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS   84 (165)
T ss_dssp             -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence            4566788888888888888888887 445677777888899999999999999999999999999999999999999999


Q ss_pred             cCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q psy11819        505 GGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK  584 (651)
Q Consensus       505 ~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g  584 (651)
                      .++.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|+. ++.+++++|+++|
T Consensus        85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~g  163 (165)
T 3twr_A           85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDA  163 (165)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC-
T ss_pred             cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhcc
Confidence            999999999999999999999999999999999999999999999999999999999999999777 8899999999887


Q ss_pred             C
Q psy11819        585 A  585 (651)
Q Consensus       585 a  585 (651)
                      +
T Consensus       164 A  164 (165)
T 3twr_A          164 A  164 (165)
T ss_dssp             -
T ss_pred             c
Confidence            6

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.95  E-value=2.5e-27  Score=201.84  Aligned_cols=152  Identities=28%  Similarity=0.326  Sum_probs=123.9

Q ss_pred             ChHHHHHHhcCcHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcH
Q psy11819        430 WTPLLVATLGNFTEVVELLLEY-KPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHR  508 (651)
Q Consensus       430 ~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~  508 (651)
                      .++|+.|+..|+.+++++|++. +.+++..+..|.||||+ +..|+.+++++|+++|++++..+..|.||||.|+..|+.
T Consensus         3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~   81 (156)
T 1bd8_A            3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFL   81 (156)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred             chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH
Confidence            4677777777777777777776 33677777778888888 777888888888888888888888888888888888888


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy11819        509 GIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDK  583 (651)
Q Consensus       509 ~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  583 (651)
                      +++++|+++|++++.++..|.||||+|+..|+.+++++|++. ++++..|..|.||||+|+..|+.+++++|+++
T Consensus        82 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  155 (156)
T 1bd8_A           82 DTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             HHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence            888888888888888888888888888888888888888888 88888888888888888888888888888763

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.94  E-value=3.7e-27  Score=195.00  Aligned_cols=132  Identities=18%  Similarity=0.230  Sum_probs=82.7

Q ss_pred             CCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCC-CCcH
Q psy11819        486 AYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKD-GDTP  564 (651)
Q Consensus       486 ~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-g~t~  564 (651)
                      ++++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+. ++.+++++|+++|++++..|.. |+||
T Consensus         3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~   81 (136)
T 1d9s_A            3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRP   81 (136)
T ss_dssp             CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCH
T ss_pred             CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCH
Confidence            4455555566666666666666666666666666666666666666666666 6666666666666666666666 6666


Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCC
Q psy11819        565 LLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK  618 (651)
Q Consensus       565 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~  618 (651)
                      ||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|+
T Consensus        82 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga  135 (136)
T 1d9s_A           82 VHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG  135 (136)
T ss_dssp             HHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            666666666666666666666666666666666666666666666666665553

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.94  E-value=7.2e-27  Score=193.25  Aligned_cols=134  Identities=21%  Similarity=0.235  Sum_probs=129.3

Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCC-CCC
Q psy11819        452 KPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKE-RKT  530 (651)
Q Consensus       452 ~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-g~t  530 (651)
                      +++++..+..|.||||.|+..|+.+++++|+++|++++.++..|.||||+|+. ++.+++++|+++|++++.++.. |.|
T Consensus         2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t   80 (136)
T 1d9s_A            2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR   80 (136)
T ss_dssp             CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred             CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence            46788899999999999999999999999999999999999999999999999 9999999999999999999999 999


Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy11819        531 AVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAK  586 (651)
Q Consensus       531 ~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  586 (651)
                      |||+|+..|+.+++++|+++|++++..|..|+||||+|+..++.+++++|+++|+|
T Consensus        81 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad  136 (136)
T 1d9s_A           81 PVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD  136 (136)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999999999999986

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.94  E-value=6e-27  Score=198.94  Aligned_cols=140  Identities=19%  Similarity=0.155  Sum_probs=63.9

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCC-HHHHHHH
Q psy11819        459 DKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKT-AVYTAVE  537 (651)
Q Consensus       459 ~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t-~l~~A~~  537 (651)
                      +..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+ .|+.+++++|+++|++++..+..|.| |||+|+.
T Consensus         9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~   87 (156)
T 1bi7_B            9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAR   87 (156)
T ss_dssp             -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHH
T ss_pred             CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHH
Confidence            334455555555555555555555555555555555555555542 44555555555555555555555554 5555555


Q ss_pred             cCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHH
Q psy11819        538 KGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLH  599 (651)
Q Consensus       538 ~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~  599 (651)
                      .|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|.||.+
T Consensus        88 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~  149 (156)
T 1bi7_B           88 EGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE  149 (156)
T ss_dssp             HTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred             CCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence            55555555555555555555555555555555555555555555555555555555544444

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.94  E-value=6e-27  Score=198.94  Aligned_cols=146  Identities=16%  Similarity=0.159  Sum_probs=121.7

Q ss_pred             cccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCc-HHHH
Q psy11819        489 NIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDT-PLLK  567 (651)
Q Consensus       489 ~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t-~L~~  567 (651)
                      ...+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+ .|+.+++++|+++|++++..|..|+| |||+
T Consensus         6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~   84 (156)
T 1bi7_B            6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD   84 (156)
T ss_dssp             ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred             cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence            455678899999999999999999999999999999999999999985 99999999999999999999999999 9999


Q ss_pred             HHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccc
Q psy11819        568 AVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDM  638 (651)
Q Consensus       568 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~  638 (651)
                      |+..|+.++|++|+++|++++.+|..|.||||+|+..++.+++++|+++|++   ++.+|..|.||.+-+.
T Consensus        85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~~~~~~  152 (156)
T 1bi7_B           85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG---TRGSNHARIDAAEGPS  152 (156)
T ss_dssp             HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------------
T ss_pred             HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC---CCccCcCcCcccccCC
Confidence            9999999999999999999999999999999999999999999999999998   7789999999988554

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.94  E-value=1.6e-27  Score=207.05  Aligned_cols=156  Identities=17%  Similarity=0.195  Sum_probs=134.0

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCCCCCcccC-CCCCcHHHHHHhcCcH----HHHHHHHhcCCCCCCCCCCCCCHHHHHH
Q psy11819        462 GCTALTIACKDGYYEIAVLLLNSGAYINIQD-RSGDSNLIHAVKGGHR----GIVEALLKKYVDVDIPGKERKTAVYTAV  536 (651)
Q Consensus       462 g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~t~l~~A~~~~~~----~~v~~Ll~~~~~~~~~~~~g~t~l~~A~  536 (651)
                      +.++++.|++.|+.+.++.+++.+.  +..+ ..|.||||+|+..++.    +++++|+++|++++.++.+|+||||+|+
T Consensus         6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~   83 (186)
T 3t8k_A            6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF   83 (186)
T ss_dssp             HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred             cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence            3467888888888888888887664  4444 6688999999988865    5899999999999999999999999999


Q ss_pred             HcCC------HHHHHHHHhcCCCccccCCCCC-cHHHHHHHcC-----CHHHHHHHHH-cCCCCcccCCCCCcHHHHHHH
Q psy11819        537 EKGN------VPILKLLLTANPDLEIATKDGD-TPLLKAVKTR-----NLEAIQMLID-KKAKITAVDKRGDTVLHIAMR  603 (651)
Q Consensus       537 ~~~~------~~~v~~Ll~~~~~~~~~~~~g~-t~L~~A~~~~-----~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~  603 (651)
                      ..++      .+++++|+++|+++|.+|..|+ ||||+|+..+     +.+++++|++ +|++++.+|..|.||||+|++
T Consensus        84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~  163 (186)
T 3t8k_A           84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKR  163 (186)
T ss_dssp             HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHT
T ss_pred             HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHH
Confidence            8886      6789999999999999999999 9999999844     4579999999 999999999999999999999


Q ss_pred             cCChHHHHHHHhCCCC
Q psy11819        604 ARSKTIVEVFIRNPKN  619 (651)
Q Consensus       604 ~~~~~~~~~Ll~~~~~  619 (651)
                      .++.+++++|.+..+.
T Consensus       164 ~~~~~~v~~L~~~~~~  179 (186)
T 3t8k_A          164 CQKPIALKMMEDYIKK  179 (186)
T ss_dssp             TTCHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHH
Confidence            9999999999887654

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.93  E-value=3.3e-25  Score=183.21  Aligned_cols=125  Identities=25%  Similarity=0.363  Sum_probs=101.4

Q ss_pred             CCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcC
Q psy11819        493 RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTR  572 (651)
Q Consensus       493 ~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~  572 (651)
                      ..+.||||.|+..|+.+++++|+++|.+++..+..|.||||+|+..++.+++++|++.|++++..|..|.||||+|+..|
T Consensus        12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~   91 (136)
T 2jab_A           12 SDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIG   91 (136)
T ss_dssp             CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred             ccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence            34567788888888888888888888888877888888888888888888888888888888888888888888888888


Q ss_pred             CHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCC
Q psy11819        573 NLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNP  617 (651)
Q Consensus       573 ~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~  617 (651)
                      +.+++++|+++|++++..|..|.||||+|+..++.+++++|+++|
T Consensus        92 ~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G  136 (136)
T 2jab_A           92 HLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN  136 (136)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred             CHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            888888888888888888888888888888888888888888764

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.93  E-value=2.3e-26  Score=199.73  Aligned_cols=156  Identities=21%  Similarity=0.193  Sum_probs=93.7

Q ss_pred             hHHHHHHhcCcHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHcCcH----HHHHHHHhCCCCCcccCCCCCcHHHHHHhc
Q psy11819        431 TPLLVATLGNFTEVVELLLEYKPNVNALD-KDGCTALTIACKDGYY----EIAVLLLNSGAYINIQDRSGDSNLIHAVKG  505 (651)
Q Consensus       431 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~g~t~l~~A~~~~~~----~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~  505 (651)
                      ++++.|+..|+.+.++.+++.+.  +..+ ..|.||||+|+..++.    +++++|+++|++++.++..|.||||+|+..
T Consensus         8 ~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~   85 (186)
T 3t8k_A            8 RTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQG   85 (186)
T ss_dssp             SSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHH
T ss_pred             cHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence            34444444444444444444332  1222 3355555555555542    355555555555555555555555555555


Q ss_pred             Cc------HHHHHHHHhcCCCCCCCCCCCC-CHHHHHHHcC-----CHHHHHHHHh-cCCCccccCCCCCcHHHHHHHcC
Q psy11819        506 GH------RGIVEALLKKYVDVDIPGKERK-TAVYTAVEKG-----NVPILKLLLT-ANPDLEIATKDGDTPLLKAVKTR  572 (651)
Q Consensus       506 ~~------~~~v~~Ll~~~~~~~~~~~~g~-t~l~~A~~~~-----~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~  572 (651)
                      ++      .+++++|+++|++++.+|..|. ||||+|+..+     +.+++++|++ .|++++.+|..|+||||+|++.|
T Consensus        86 ~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~  165 (186)
T 3t8k_A           86 GGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQ  165 (186)
T ss_dssp             CTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTT
T ss_pred             CCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcC
Confidence            44      4566666666666666666666 6677666633     3457777777 77888878888888888888888


Q ss_pred             CHHHHHHHHHcCCCCc
Q psy11819        573 NLEAIQMLIDKKAKIT  588 (651)
Q Consensus       573 ~~~~v~~Ll~~ga~~~  588 (651)
                      +.++|++|.+...+.+
T Consensus       166 ~~~~v~~L~~~~~~~~  181 (186)
T 3t8k_A          166 KPIALKMMEDYIKKYN  181 (186)
T ss_dssp             CHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHh
Confidence            8888877776544333

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.93  E-value=8.2e-25  Score=178.95  Aligned_cols=124  Identities=32%  Similarity=0.518  Sum_probs=79.0

Q ss_pred             CCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCH
Q psy11819        495 GDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNL  574 (651)
Q Consensus       495 ~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~  574 (651)
                      |.|||+.|+..|+.+++++|+++|.+++..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..++.
T Consensus         2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~   81 (126)
T 1n0r_A            2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL   81 (126)
T ss_dssp             CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred             CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChH
Confidence            55666666666666666666666666666666666666666666666666666666666666666666666666666666


Q ss_pred             HHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCC
Q psy11819        575 EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK  618 (651)
Q Consensus       575 ~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~  618 (651)
                      +++++|+++|++++.+|..|.|||++|+..++.+++++|+++|+
T Consensus        82 ~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga  125 (126)
T 1n0r_A           82 EVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA  125 (126)
T ss_dssp             HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred             HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence            66666666666666666666666666666666666666666554

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.92  E-value=1.2e-24  Score=177.97  Aligned_cols=126  Identities=34%  Similarity=0.561  Sum_probs=119.7

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC
Q psy11819        461 DGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGN  540 (651)
Q Consensus       461 ~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~  540 (651)
                      +|.||||.|+..|+.+++++|+++|++++..+..|.|||+.|+..++.+++++|+++|.+++.++..|.||||+|+..++
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~   80 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH   80 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy11819        541 VPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAK  586 (651)
Q Consensus       541 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  586 (651)
                      .+++++|+++|++++..+..|.|||++|+..++.+++++|+++|++
T Consensus        81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad  126 (126)
T 1n0r_A           81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY  126 (126)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence            9999999999999999999999999999999999999999999986

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.92  E-value=1e-24  Score=180.76  Aligned_cols=124  Identities=22%  Similarity=0.290  Sum_probs=75.0

Q ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q psy11819        523 IPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAM  602 (651)
Q Consensus       523 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~  602 (651)
                      .++..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus         5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~   84 (137)
T 3c5r_A            5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA   84 (137)
T ss_dssp             CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred             CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence            44555666666666666666666666666666666666666666666666666666666666666666666666666666


Q ss_pred             HcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccccchhhhhcc
Q psy11819        603 RARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQEC  649 (651)
Q Consensus       603 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~  649 (651)
                      ..++.+++++|++++.+   ++.+|..|+||+|+|...+...+++.+
T Consensus        85 ~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~A~~~~~~~~l~~l  128 (137)
T 3c5r_A           85 KNGHVDIVKLLLSYGAS---RNAVNIFGLRPVDYTDDESMKSLLLLP  128 (137)
T ss_dssp             HTTCHHHHHHHHHTTCC---TTCCCTTSCCGGGGCCCHHHHHHHSCC
T ss_pred             HcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHhhccHHHHHhhc
Confidence            66666666666666555   455566666666666665555555443

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.92  E-value=1.6e-24  Score=179.13  Aligned_cols=126  Identities=27%  Similarity=0.283  Sum_probs=114.2

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHc
Q psy11819        459 DKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEK  538 (651)
Q Consensus       459 ~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~  538 (651)
                      ...+.||||.|+..|+.+++++|+++|++++..+..|.||||.|+..++.+++++|+++|++++..+..|.||||+|+..
T Consensus        11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~   90 (136)
T 2jab_A           11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI   90 (136)
T ss_dssp             -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred             cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence            34567899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q psy11819        539 GNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK  584 (651)
Q Consensus       539 ~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g  584 (651)
                      ++.+++++|+++|++++..|..|+||||+|+..|+.+++++|++.|
T Consensus        91 ~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G  136 (136)
T 2jab_A           91 GHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN  136 (136)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred             CCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            9999999999999999999999999999999999999999999876

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.92  E-value=1.7e-25  Score=185.42  Aligned_cols=134  Identities=21%  Similarity=0.258  Sum_probs=107.7

Q ss_pred             CCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcH
Q psy11819        485 GAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTP  564 (651)
Q Consensus       485 g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~  564 (651)
                      |+|+ .++..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++..|..|+||
T Consensus         1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~   79 (137)
T 3c5r_A            1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP   79 (137)
T ss_dssp             ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred             CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence            4566 677788888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCC
Q psy11819        565 LLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKN  619 (651)
Q Consensus       565 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~  619 (651)
                      ||+|+..|+.+++++|+++|++++.+|..|.||+++|+..+..+++++|.+++..
T Consensus        80 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s  134 (137)
T 3c5r_A           80 LHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS  134 (137)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence            8888888888888888888888888888888888888888888888777766543

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.90  E-value=1.1e-23  Score=170.61  Aligned_cols=114  Identities=21%  Similarity=0.224  Sum_probs=61.3

Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC
Q psy11819        527 ERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARS  606 (651)
Q Consensus       527 ~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~  606 (651)
                      .|.|+||+|+..|+.+++++|++.|++++..|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..++
T Consensus         6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~   85 (123)
T 3aaa_C            6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGH   85 (123)
T ss_dssp             -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred             ccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC
Confidence            34455555555555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             hHHHHHHHhCCCCcccccCCCCCCCCcccccccccch
Q psy11819        607 KTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKS  643 (651)
Q Consensus       607 ~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~  643 (651)
                      .+++++|++++.+   ++.+|..|+||+|+|...+..
T Consensus        86 ~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~  119 (123)
T 3aaa_C           86 VSCVKLLLSKGAD---KTVKGPDGLTAFEATDNQAIK  119 (123)
T ss_dssp             HHHHHHHHHTTCC---TTCCCTTSCCHHHHCCCHHHH
T ss_pred             HHHHHHHHHcCCC---CCCcCCCCCCHHHHhCCHHHH
Confidence            5555555555544   444555555555555444333

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.90  E-value=1e-23  Score=198.67  Aligned_cols=139  Identities=19%  Similarity=0.244  Sum_probs=109.9

Q ss_pred             CcHHHHHHhcCcHHHHHHHHhcCCCCCC------CCCCCCCHHHHHHHc---CCHHHHHHHHhcCCCccccCCCCCcHHH
Q psy11819        496 DSNLIHAVKGGHRGIVEALLKKYVDVDI------PGKERKTAVYTAVEK---GNVPILKLLLTANPDLEIATKDGDTPLL  566 (651)
Q Consensus       496 ~t~l~~A~~~~~~~~v~~Ll~~~~~~~~------~~~~g~t~l~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~g~t~L~  566 (651)
                      .++|+.|+..|+.+.++.|++.|++++.      .+..|.||||+|+..   ++.+++++|+++|++++..|..|+||||
T Consensus       152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh  231 (301)
T 2b0o_E          152 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH  231 (301)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHH
T ss_pred             HHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHH
Confidence            4567777777777777777777777776      577888888888886   7888888888888888888888888888


Q ss_pred             HHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccccch
Q psy11819        567 KAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKS  643 (651)
Q Consensus       567 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~  643 (651)
                      +|+..|+.++|++|+++|++++.+|..|.||||+|+..++.+++++|++++++         .|.||||+|+..|..
T Consensus       232 ~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~---------~g~tpLh~A~~~g~~  299 (301)
T 2b0o_E          232 YAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG---------TFAFPLHVDYSWVIS  299 (301)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH---------TTSSCCC--------
T ss_pred             HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC---------CCCChhHHHHhcCCc
Confidence            88888888888888888888888888888888888888888888888888765         578999998887754

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.90  E-value=1.2e-23  Score=170.39  Aligned_cols=113  Identities=25%  Similarity=0.311  Sum_probs=96.9

Q ss_pred             CCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHc
Q psy11819        492 DRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKT  571 (651)
Q Consensus       492 ~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~  571 (651)
                      +..|.|||+.|+..|+.+++++|+++|.+++..+..|.||||+|+..++.+++++|++.|++++..|..|+||||+|+..
T Consensus         4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~   83 (123)
T 3aaa_C            4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE   83 (123)
T ss_dssp             ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence            34567888888888888888888888888888888888999999999999999999999999888888999999999999


Q ss_pred             CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Q psy11819        572 RNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRA  604 (651)
Q Consensus       572 ~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~  604 (651)
                      ++.+++++|+++|++++.+|..|.||||+|...
T Consensus        84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~  116 (123)
T 3aaa_C           84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQ  116 (123)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCH
T ss_pred             CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCH
Confidence            999999999999999998999999999988443

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.90  E-value=2.5e-23  Score=181.76  Aligned_cols=139  Identities=17%  Similarity=0.163  Sum_probs=116.2

Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCC-CCCCCHHHHHHHc
Q psy11819        460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPG-KERKTAVYTAVEK  538 (651)
Q Consensus       460 ~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~g~t~l~~A~~~  538 (651)
                      ..|.||||.|+..|+.+++++|++ |++++..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..
T Consensus        42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~  120 (183)
T 3deo_A           42 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY  120 (183)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHT
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhc
Confidence            356788888888888888888888 88888888888888888888888888888888888888777 7788888888888


Q ss_pred             CCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhC
Q psy11819        539 GNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN  616 (651)
Q Consensus       539 ~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~  616 (651)
                      |+.+++++|+++|++++.+|..|+||||+|+..++.                 ..+.++|++|++.|+.+++++|.++
T Consensus       121 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~L~~~  181 (183)
T 3deo_A          121 VRPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEGQ  181 (183)
T ss_dssp             TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred             CcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence            888888888888888888888888888888864432                 3457888899988888888888765

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.89  E-value=1.2e-22  Score=191.45  Aligned_cols=141  Identities=19%  Similarity=0.100  Sum_probs=126.5

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCCCCcc------cCCCCCcHHHHHHhc---CcHHHHHHHHhcCCCCCCCCCCCCCH
Q psy11819        461 DGCTALTIACKDGYYEIAVLLLNSGAYINI------QDRSGDSNLIHAVKG---GHRGIVEALLKKYVDVDIPGKERKTA  531 (651)
Q Consensus       461 ~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~~~t~l~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~g~t~  531 (651)
                      ...++|+.|+..|+.+.+++|++.|++++.      .+..|.||||+|+..   ++.+++++|+++|++++..|..|.||
T Consensus       150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~Tp  229 (301)
T 2b0o_E          150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA  229 (301)
T ss_dssp             -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCH
T ss_pred             chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCH
Confidence            345689999999999999999999999998      688999999999997   89999999999999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCh
Q psy11819        532 VYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSK  607 (651)
Q Consensus       532 l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~  607 (651)
                      ||+|+..|+.+++++|++.|++++..|..|.||||+|+..++.+++++|+++|++      .|.||||+|+.+|+.
T Consensus       230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~  299 (301)
T 2b0o_E          230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS  299 (301)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence            9999999999999999999999999999999999999999999999999999887      479999999988763

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.89  E-value=5e-23  Score=188.61  Aligned_cols=139  Identities=17%  Similarity=0.166  Sum_probs=109.5

Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCC-CCCCCHHHHHHHc
Q psy11819        460 KDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPG-KERKTAVYTAVEK  538 (651)
Q Consensus       460 ~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~g~t~l~~A~~~  538 (651)
                      ..|.||||.|+..|+.+++++|++ |++++..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..
T Consensus        43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~  121 (244)
T 3ui2_A           43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY  121 (244)
T ss_dssp             HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred             cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence            356778888888888888888887 77788888888888888888888888888888888887777 6788888888888


Q ss_pred             CCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhC
Q psy11819        539 GNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN  616 (651)
Q Consensus       539 ~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~  616 (651)
                      |+.+++++|+++|++++..|..|+||||+|+..++                 ...+.|||++|+..|+.+++++|++.
T Consensus       122 g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~iv~~L~~~  182 (244)
T 3ui2_A          122 VRPEVVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEKVINVLEGQ  182 (244)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHHHHHHHHHh
Confidence            88888888888888888888888888888875322                 24567888888888888888888875

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.88  E-value=6.4e-22  Score=184.21  Aligned_cols=201  Identities=20%  Similarity=0.169  Sum_probs=151.1

Q ss_pred             cCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCC-CCCCCCcHHHHHHHcCcHHHHHHHHhCCC-CCcccCCCCCcHHHHH
Q psy11819        425 AGLYCWTPLLVATLGNFTEVVELLLEYKPNVNA-LDKDGCTALTIACKDGYYEIAVLLLNSGA-YINIQDRSGDSNLIHA  502 (651)
Q Consensus       425 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~~~t~l~~A  502 (651)
                      .|..+.+.++.+...|+....+++...-..... +...+...    .....+-..+|+...-. ..........++|+.|
T Consensus        62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~----~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a  137 (278)
T 1dcq_A           62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDM----IARKDYITAKYMERRYARKKHADTAAKLHSLCEA  137 (278)
T ss_dssp             TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCH----HHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCH----HHHHHHHHHHHHHhhcccccccccchhhhhhhhH
Confidence            455677889999888988777766543222111 11111112    11122222233322211 1111111224689999


Q ss_pred             HhcCcHHHHHHHHhcCCC------CCCCCCCCCCHHHHHHHc---CCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q psy11819        503 VKGGHRGIVEALLKKYVD------VDIPGKERKTAVYTAVEK---GNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRN  573 (651)
Q Consensus       503 ~~~~~~~~v~~Ll~~~~~------~~~~~~~g~t~l~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~  573 (651)
                      +..++.+.++.+++.|.+      ++..+..|.||||+|+..   ++.+++++|+++|+++|..|..|+||||+|+..|+
T Consensus       138 ~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~  217 (278)
T 1dcq_A          138 VKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDN  217 (278)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTC
T ss_pred             hhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCC
Confidence            999999999999999988      445578899999999999   89999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccc
Q psy11819        574 LEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNN  640 (651)
Q Consensus       574 ~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~  640 (651)
                      .++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++++.           .+++|.+++.
T Consensus       218 ~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-----------~~~~~~~v~~  273 (278)
T 1dcq_A          218 AECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG-----------RFNSHVHVEY  273 (278)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT-----------CCCSSCCCCC
T ss_pred             HHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----------CCCcceeeec
Confidence            9999999999999999999999999999999999999999999864           4666666553

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.88  E-value=1.9e-23  Score=189.33  Aligned_cols=130  Identities=25%  Similarity=0.259  Sum_probs=93.4

Q ss_pred             CCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc-CCCccccCCCCCcHHHHHHH
Q psy11819        492 DRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTA-NPDLEIATKDGDTPLLKAVK  570 (651)
Q Consensus       492 ~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~  570 (651)
                      +..|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++. |++++..|..|+||||+|+.
T Consensus        70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~  149 (222)
T 3ehr_A           70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW  149 (222)
T ss_dssp             EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred             ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence            44567777777777777777777777777777777777777777777777777777777 77777777777788888887


Q ss_pred             cCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcc
Q psy11819        571 TRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNI  621 (651)
Q Consensus       571 ~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~  621 (651)
                      .|+.++|++|+++|++++.+|..|.|||++|+..+..++++.|++.++...
T Consensus       150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~  200 (222)
T 3ehr_A          150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT  200 (222)
T ss_dssp             HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred             cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence            778888888887787777777778888888877777777777777777643

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.88  E-value=3.2e-22  Score=174.67  Aligned_cols=140  Identities=25%  Similarity=0.310  Sum_probs=128.1

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCC-CCCchHHHHHHH
Q psy11819        154 DDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRD-MGGWSPLMWASY  232 (651)
Q Consensus       154 ~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~-~~~~t~L~~A~~  232 (651)
                      +..|.||||+|+..|+.+++++|++ |++++..+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+.
T Consensus        41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~  119 (183)
T 3deo_A           41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG  119 (183)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence            3457899999999999999999999 99999999999999999999999999999999999999888 889999999999


Q ss_pred             cCCHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q psy11819        233 KGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKA  312 (651)
Q Consensus       233 ~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~  312 (651)
                      .|+.+++++|+++|++++..+..|.|||++|+..++.                 . .+.+++++|+..|+.+++++|.++
T Consensus       120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~-~~~~~l~~a~~~~~~~i~~~L~~~  181 (183)
T 3deo_A          120 YVRPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------T-PKGNPMQFGRRIGLEKVINVLEGQ  181 (183)
T ss_dssp             TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------C-CCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred             cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------c-ccccHHHHHHHcCHHHHHHHHHHh
Confidence            9999999999999999999999999999999875433                 1 467999999999999999999864

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.88  E-value=2.5e-22  Score=192.95  Aligned_cols=122  Identities=21%  Similarity=0.206  Sum_probs=61.5

Q ss_pred             CCcHHHHHHHc-CcHHHHHHHHhCCCCCcccC--CCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHc
Q psy11819        462 GCTALTIACKD-GYYEIAVLLLNSGAYINIQD--RSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEK  538 (651)
Q Consensus       462 g~t~l~~A~~~-~~~~~~~~Ll~~g~~~~~~~--~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~  538 (651)
                      +.|+||.|+.. ++.+++++|+++|++++..+  ..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..
T Consensus       199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~  278 (368)
T 3jue_A          199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL  278 (368)
T ss_dssp             HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence            33455555555 55555555555555555444  4444555555555555555555555555554444455555555555


Q ss_pred             CCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy11819        539 GNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDK  583 (651)
Q Consensus       539 ~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  583 (651)
                      |+.+++++|+++|++++..|..|.||||+|+..++.+++++|+..
T Consensus       279 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~  323 (368)
T 3jue_A          279 GHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLA  323 (368)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred             CcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence            555555555555555544444555555555555555555555443

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.88  E-value=6.9e-23  Score=185.56  Aligned_cols=136  Identities=22%  Similarity=0.246  Sum_probs=114.0

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHH
Q psy11819        459 DKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKK-YVDVDIPGKERKTAVYTAVE  537 (651)
Q Consensus       459 ~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~l~~A~~  537 (651)
                      +..|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++ |++++..+..|.||||+|+.
T Consensus        70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~  149 (222)
T 3ehr_A           70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW  149 (222)
T ss_dssp             EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred             ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence            45688999999999999999999999999999999999999999999999999999998 99999999999999999999


Q ss_pred             cCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Q psy11819        538 KGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRG  594 (651)
Q Consensus       538 ~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g  594 (651)
                      .|+.+++++|+++|++++..+..|+|||++|+..++.++++.|++.|+.....+..+
T Consensus       150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~  206 (222)
T 3ehr_A          150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED  206 (222)
T ss_dssp             HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred             cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence            999999999999999999999999999999999999999999999999877665443

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.87  E-value=3.7e-22  Score=182.83  Aligned_cols=141  Identities=26%  Similarity=0.236  Sum_probs=105.0

Q ss_pred             CCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccC-CCCCcHHHHHHhcC
Q psy11819        428 YCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD-RSGDSNLIHAVKGG  506 (651)
Q Consensus       428 ~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~t~l~~A~~~~  506 (651)
                      .|.||||.|+..++.+++++|++ |++++..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|
T Consensus        44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g  122 (244)
T 3ui2_A           44 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV  122 (244)
T ss_dssp             HHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTT
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcC
Confidence            45677777777777777777777 77777777777777777777777777777777777777776 66777777777777


Q ss_pred             cHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy11819        507 HRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAK  586 (651)
Q Consensus       507 ~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  586 (651)
                      +.+++++|+++|++++..+..|.||||+|+..++                 ...+.|||++|+..|+.+++++|++.+.+
T Consensus       123 ~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~iv~~L~~~~~~  185 (244)
T 3ui2_A          123 RPEVVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEKVINVLEGQVFE  185 (244)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred             CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence            7777777777777777777778888887775221                 24567888888888888888888875433

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.86  E-value=1.8e-21  Score=148.38  Aligned_cols=92  Identities=32%  Similarity=0.533  Sum_probs=73.6

Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC
Q psy11819        527 ERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARS  606 (651)
Q Consensus       527 ~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~  606 (651)
                      +|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~   80 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH   80 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence            36788888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             hHHHHHHHhCCC
Q psy11819        607 KTIVEVFIRNPK  618 (651)
Q Consensus       607 ~~~~~~Ll~~~~  618 (651)
                      .+++++|+++|+
T Consensus        81 ~~~~~~Ll~~ga   92 (93)
T 1n0q_A           81 LEVVKLLLEAGA   92 (93)
T ss_dssp             HHHHHHHHHTTC
T ss_pred             HHHHHHHHHcCC
Confidence            888888887775

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.85  E-value=6e-21  Score=177.65  Aligned_cols=190  Identities=19%  Similarity=0.147  Sum_probs=144.4

Q ss_pred             cCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHH--HHHHhcCC-CCCCCCCCCCcHHHHH
Q psy11819        393 LSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVV--ELLLEYKP-NVNALDKDGCTALTIA  469 (651)
Q Consensus       393 ~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~--~~Ll~~~~-~~~~~~~~g~t~l~~A  469 (651)
                      |..+.+.++.+...|+..+.+++...-..............   ..  ..+.+  +++..... ..........++|+.|
T Consensus        63 d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~---~~--~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a  137 (278)
T 1dcq_A           63 DVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDM---IA--RKDYITAKYMERRYARKKHADTAAKLHSLCEA  137 (278)
T ss_dssp             SCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCH---HH--HHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCH---HH--HHHHHHHHHHHhhcccccccccchhhhhhhhH
Confidence            45577889999999987776665433221111011111111   11  12222  23322211 1111112234689999


Q ss_pred             HHcCcHHHHHHHHhCCCCCc------ccCCCCCcHHHHHHhc---CcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC
Q psy11819        470 CKDGYYEIAVLLLNSGAYIN------IQDRSGDSNLIHAVKG---GHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGN  540 (651)
Q Consensus       470 ~~~~~~~~~~~Ll~~g~~~~------~~~~~~~t~l~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~  540 (651)
                      +..|+.+.++.+++.|++++      ..+..|.||||+|+..   ++.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus       138 ~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~  217 (278)
T 1dcq_A          138 VKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDN  217 (278)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTC
T ss_pred             hhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCC
Confidence            99999999999999999844      4478899999999999   89999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q psy11819        541 VPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKI  587 (651)
Q Consensus       541 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~  587 (651)
                      .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus       218 ~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~  264 (278)
T 1dcq_A          218 AECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR  264 (278)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            99999999999999999999999999999999999999999998863

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.85  E-value=8.3e-21  Score=144.74  Aligned_cols=93  Identities=32%  Similarity=0.515  Sum_probs=79.6

Q ss_pred             CCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q psy11819        494 SGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRN  573 (651)
Q Consensus       494 ~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~  573 (651)
                      +|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~   80 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH   80 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence            36788888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHHHHHHcCCC
Q psy11819        574 LEAIQMLIDKKAK  586 (651)
Q Consensus       574 ~~~v~~Ll~~ga~  586 (651)
                      .+++++|+++|++
T Consensus        81 ~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           81 LEVVKLLLEAGAY   93 (93)
T ss_dssp             HHHHHHHHHTTCC
T ss_pred             HHHHHHHHHcCCC
Confidence            8888888888874

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.84  E-value=1.2e-20  Score=181.33  Aligned_cols=147  Identities=18%  Similarity=0.174  Sum_probs=92.3

Q ss_pred             CCCCcHHHHHHhc-CcHHHHHHHHhcCCCCCCCC--CCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q psy11819        493 RSGDSNLIHAVKG-GHRGIVEALLKKYVDVDIPG--KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAV  569 (651)
Q Consensus       493 ~~~~t~l~~A~~~-~~~~~v~~Ll~~~~~~~~~~--~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~  569 (651)
                      ..+.|+|+.|+.. ++.+++++|+++|++++..+  ..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+
T Consensus       197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~  276 (368)
T 3jue_A          197 LHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHAT  276 (368)
T ss_dssp             CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence            3455677777777 77777777777777777666  66777777777777777777777777777777777777777777


Q ss_pred             HcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCccccccc
Q psy11819        570 KTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMN  639 (651)
Q Consensus       570 ~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~  639 (651)
                      ..|+.++|++|+++|++++..|..|.||||+|+..++.+++++|+..+.........+..+.|+++++-.
T Consensus       277 ~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~  346 (368)
T 3jue_A          277 ILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRD  346 (368)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------
T ss_pred             HcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHH
Confidence            7777777777777777777777777777777777777777777776654443344456666677666544

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.83  E-value=9.8e-21  Score=151.21  Aligned_cols=106  Identities=32%  Similarity=0.428  Sum_probs=47.3

Q ss_pred             CCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHc
Q psy11819        492 DRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKT  571 (651)
Q Consensus       492 ~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~  571 (651)
                      |..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.|++++..|..|+||||+|+..
T Consensus         6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~   85 (115)
T 2l6b_A            6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKN   85 (115)
T ss_dssp             SCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTT
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHC
Confidence            33444444444444444444444444444444444444444444444444444444444444444444444444444444


Q ss_pred             CCHHHHHHHHHcCCCCcccCCCCCcH
Q psy11819        572 RNLEAIQMLIDKKAKITAVDKRGDTV  597 (651)
Q Consensus       572 ~~~~~v~~Ll~~ga~~~~~d~~g~t~  597 (651)
                      ++.+++++|+++|++++.++..|.+|
T Consensus        86 ~~~~~~~~Ll~~ga~~n~~~~~~~~~  111 (115)
T 2l6b_A           86 GHHEIVKLLDAKGADVNARSWGSSHH  111 (115)
T ss_dssp             TCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred             CCHHHHHHHHHcCCCCCcCCcccccc
Confidence            44444444444444444444444433

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.83  E-value=7.8e-21  Score=151.80  Aligned_cols=109  Identities=26%  Similarity=0.359  Sum_probs=102.5

Q ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q psy11819        523 IPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAM  602 (651)
Q Consensus       523 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~  602 (651)
                      .+|.+|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..++.+++++|+++|++++..|..|.||||+|+
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~   83 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK   83 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence            46889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCChHHHHHHHhCCCCcccccCCCCCCCCcc
Q psy11819        603 RARSKTIVEVFIRNPKNNILLYRPNKAGETPY  634 (651)
Q Consensus       603 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l  634 (651)
                      ..++.+++++|+++|++   ++.++..|.||-
T Consensus        84 ~~~~~~~~~~Ll~~ga~---~n~~~~~~~~~~  112 (115)
T 2l6b_A           84 KNGHHEIVKLLDAKGAD---VNARSWGSSHHH  112 (115)
T ss_dssp             TTTCHHHHHHHHTTSSS---HHHHSCCCC---
T ss_pred             HCCCHHHHHHHHHcCCC---CCcCCccccccc
Confidence            99999999999999998   777899999884

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.76  E-value=2e-18  Score=135.97  Aligned_cols=91  Identities=24%  Similarity=0.434  Sum_probs=79.3

Q ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q psy11819        523 IPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAM  602 (651)
Q Consensus       523 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~  602 (651)
                      ..+.+|.|+||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus        19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~   98 (110)
T 2zgd_A           19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISI   98 (110)
T ss_dssp             ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHH
Confidence            45677889999999999999999999999999888889999999999999999999999999999989999999999999


Q ss_pred             HcCChHHHHHH
Q psy11819        603 RARSKTIVEVF  613 (651)
Q Consensus       603 ~~~~~~~~~~L  613 (651)
                      ..++.+++++|
T Consensus        99 ~~~~~~~~~~L  109 (110)
T 2zgd_A           99 DNGNEDLAEIL  109 (110)
T ss_dssp             HHTCHHHHHHH
T ss_pred             HcCCHHHHHHh
Confidence            99999988876

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.73  E-value=1.8e-17  Score=130.51  Aligned_cols=93  Identities=33%  Similarity=0.439  Sum_probs=83.2

Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHH
Q psy11819        150 ADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMW  229 (651)
Q Consensus       150 ~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~  229 (651)
                      ....+..|.|+||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+
T Consensus        17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~   96 (110)
T 2zgd_A           17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI   96 (110)
T ss_dssp             -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred             ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence            35667889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCHHHHHHH
Q psy11819        230 ASYKGHTDTVALL  242 (651)
Q Consensus       230 A~~~~~~~~v~~L  242 (651)
                      |+..|+.+++++|
T Consensus        97 A~~~~~~~~~~~L  109 (110)
T 2zgd_A           97 SIDNGNEDLAEIL  109 (110)
T ss_dssp             HHHHTCHHHHHHH
T ss_pred             HHHcCCHHHHHHh
Confidence            9999999999887

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	651
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	5e-71
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	8e-67
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	5e-64
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-53
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	5e-42
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	3e-30
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-38
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-37
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-34
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	6e-33
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	5e-28
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	5e-27
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	5e-26
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	5e-24
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	9e-24
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-19
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-11
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	9e-10
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-07
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-33
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-27
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	9e-24
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	5e-23
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	4e-05
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-29
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	6e-28
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-26
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-24
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	4e-21
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	1e-27
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	3e-24
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	9e-24
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	1e-20
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	7e-20
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	8e-17
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	5e-07
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-27
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	7e-24
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-21
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-18
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	9e-18
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-11
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-06
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-05
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	0.002
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	2e-26
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	9e-24
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-21
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	7e-20
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	3e-17
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-13
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	1e-22
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	2e-19
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	2e-16
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	3e-16
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	4e-16
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	1e-14
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	6e-12
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	4e-22
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	1e-21
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	5e-19
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	2e-18
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	2e-17
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	4e-14
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	1e-05
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	3e-21
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	4e-20
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	3e-19
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-18
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-16
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	7e-16
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	5e-15
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-05
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-18
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-15
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-13
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-13
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-11
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	4e-17
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	1e-14
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	5e-13
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	3e-09
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-08
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	7e-17
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	8e-10
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	5e-09
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	1e-08
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	2e-07
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	1e-06
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	2e-06
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	4e-04
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	1e-16
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	6e-16
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	1e-13
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-13
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-05
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	1e-15
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	1e-13
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	1e-13
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	3e-10
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	6e-09
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	1e-08
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	7e-05
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	8e-14
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	1e-13
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	5e-11
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	1e-08
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	2e-06
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	9e-06
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	1e-05
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	2e-13
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	7e-09
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	1e-07
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	6e-06
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	9e-06
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	5e-05
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	4e-10
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	5e-10
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	1e-09
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	6e-08
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	3e-04
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	3e-04
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	2e-06
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	2e-04
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	7e-04
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	0.002

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  233 bits (595), Expect = 5e-71
 Identities = 118/437 (27%), Positives = 190/437 (43%), Gaps = 44/437 (10%)

Query: 159 TALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEH 218
           T L  A+  G L  V+ L+ RGA  N  +    +PL  AAR G+T+V   LL + A +  
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61

Query: 219 RDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKK 278
           +     +PL  A+  GHT+ V LLL+ NA+ N       + L  AA  G+ E V  L++K
Sbjct: 62  KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 121

Query: 279 GAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSE 338
            A      K  G TPL  A + G V + ++LL+  A+ + AG     PL+ +   +    
Sbjct: 122 EASQACMTK-KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNN--- 177

Query: 339 PGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTT 398
                                      + +K    +G  P                 G T
Sbjct: 178 --------------------------LDIVKLLLPRGGSPH-----------SPAWNGYT 200

Query: 399 PLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNAL 458
           PL  A ++  VE+   LL+ G + +   +   TPL +A      E+V LLL  + N N  
Sbjct: 201 PLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLG 260

Query: 459 DKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKY 518
           +K G T L +  ++G+  +A +L+  G  ++   R G + L  A   G+  +V+ LL+  
Sbjct: 261 NKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ 320

Query: 519 VDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQ 578
            DV+   K   + ++ A ++G+  I+ LLL         + DG TPL  A +   +    
Sbjct: 321 ADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTD 380

Query: 579 ML---IDKKAKITAVDK 592
           +L    D+ + +   DK
Sbjct: 381 VLKVVTDETSFVLVSDK 397

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  222 bits (566), Expect = 8e-67
 Identities = 106/400 (26%), Positives = 176/400 (44%), Gaps = 12/400 (3%)

Query: 135 NLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPL 194
           +L  ++  L+   +  +  +    T L  AA+ G     + L+   A VNA+  D+ +PL
Sbjct: 12  HLPIVKNLLQRGASP-NVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPL 70

Query: 195 TYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGN 254
             AAR G+T++   LL++ A+       G +PL  A+ +GH +TV  LL+K A       
Sbjct: 71  HCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTK 130

Query: 255 YHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGA 314
              + L  AA  G   +  LL+++ A  N   K  G TPL  A    +++IV +LL  G 
Sbjct: 131 KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGK-NGLTPLHVAVHHNNLDIVKLLLPRGG 189

Query: 315 NVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQ 374
           +        Y PL+ +A  +                A+   G + L    +E        
Sbjct: 190 SPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVAL 249

Query: 375 GVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLL 434
            +      +       +    G TPL    ++GHV + D+L+K G  VD      +TPL 
Sbjct: 250 LLSKQANGN-------LGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLH 302

Query: 435 VATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRS 494
           VA+     ++V+ LL+++ +VNA  K G + L  A + G+ +I  LLL +GA  N     
Sbjct: 303 VASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSD 362

Query: 495 GDSNLIHAVKGGHRGIVEAL---LKKYVDVDIPGKERKTA 531
           G + L  A + G+  + + L     +   V +  K R + 
Sbjct: 363 GTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSF 402

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  215 bits (547), Expect = 5e-64
 Identities = 110/391 (28%), Positives = 169/391 (43%), Gaps = 16/391 (4%)

Query: 226 PLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVG 285
           PL  AS+ GH   V  LL + A  N       + L  AA  G+TE+   L++  AKVN  
Sbjct: 3   PLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAK 62

Query: 286 DKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPL 345
            K    TPL  A R GH  +V +LL+  AN ++A    + PL+ +A              
Sbjct: 63  AK-DDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 121

Query: 346 TVGLYAKWGSGKSFLLPKLK----EEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLV 401
                     G + L    K       +    +   P                 G TPL 
Sbjct: 122 EASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGK-----------NGLTPLH 170

Query: 402 WACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKD 461
            A    +++IV +LL  G +        +TPL +A   N  EV   LL+Y  + NA    
Sbjct: 171 VAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQ 230

Query: 462 GCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDV 521
           G T L +A ++G+ E+  LLL+  A  N+ ++SG + L    + GH  + + L+K  V V
Sbjct: 231 GVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV 290

Query: 522 DIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLI 581
           D   +   T ++ A   GN+ ++K LL    D+   TK G +PL +A +  + + + +L+
Sbjct: 291 DATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLL 350

Query: 582 DKKAKITAVDKRGDTVLHIAMRARSKTIVEV 612
              A    V   G T L IA R    ++ +V
Sbjct: 351 KNGASPNEVSSDGTTPLAIAKRLGYISVTDV 381

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  187 bits (474), Expect = 2e-53
 Identities = 106/453 (23%), Positives = 168/453 (37%), Gaps = 59/453 (13%)

Query: 18  LIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDK--NKHK 75
           L  A   GH  IV+ LL++    ++     K+   L++          + LL      + 
Sbjct: 4   LHVASFMGHLPIVKNLLQRGASPNVSNV--KVETPLHMAARAGHTEVAKYLLQNKAKVNA 61

Query: 76  SLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDN 135
             K+ +T ++ A   G+  ++KLLL  N +  +AT        + +            + 
Sbjct: 62  KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 121

Query: 136 LDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLT 195
             S                  G T L  AA+ GK+     L+ R A  NA   +  +PL 
Sbjct: 122 EASQ-----------ACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLH 170

Query: 196 YAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNY 255
            A      D+   LL  G         G++PL  A+ +   +    LL      NA    
Sbjct: 171 VAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQ 230

Query: 256 HISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGAN 315
            ++ L  AA  G+ E+VALL+ K A  N+G+K  G TPL    ++GHV + D+L+K G  
Sbjct: 231 GVTPLHLAAQEGHAEMVALLLSKQANGNLGNK-SGLTPLHLVAQEGHVPVADVLIKHGVM 289

Query: 316 VDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQG 375
           VD      Y PL+                           G   L+  L +       + 
Sbjct: 290 VDATTRMGYTPLHV----------------------ASHYGNIKLVKFLLQHQADVNAKT 327

Query: 376 VDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLV 435
                               G +PL  A ++GH +IV +LLK GA+ +       TPL +
Sbjct: 328 ------------------KLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAI 369

Query: 436 ATLGNFTEVVELL---LEYKPNVNALDKDGCTA 465
           A    +  V ++L    +    V   DK   + 
Sbjct: 370 AKRLGYISVTDVLKVVTDETSFVLVSDKHRMSF 402

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (391), Expect = 5e-42
 Identities = 76/276 (27%), Positives = 111/276 (40%), Gaps = 36/276 (13%)

Query: 398 TPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNA 457
           TPL  A   GH+ IV  LL+ GA+ +V+ +   TPL +A     TEV + LL+ K  VNA
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61

Query: 458 LDKDGCTALTIACKDGYYEIAVLLLNS--------------------------------- 484
             KD  T L  A + G+  +  LLL +                                 
Sbjct: 62  KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 121

Query: 485 GAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPIL 544
            A      + G + L  A K G   + E LL++    +  GK   T ++ AV   N+ I+
Sbjct: 122 EASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIV 181

Query: 545 KLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRA 604
           KLLL           +G TPL  A K   +E  + L+       A   +G T LH+A + 
Sbjct: 182 KLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQE 241

Query: 605 RSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNN 640
               +V + +    N       NK+G TP  +    
Sbjct: 242 GHAEMVALLLSKQAN---GNLGNKSGLTPLHLVAQE 274

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (303), Expect = 3e-30
 Identities = 68/298 (22%), Positives = 119/298 (39%), Gaps = 18/298 (6%)

Query: 1   MCQDDVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDAND 60
           + ++   +   + G + L  A K G   + E LL++    +  GK       L+V   ++
Sbjct: 119 LEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGL--TPLHVAVHHN 176

Query: 61  QRSTTRNLLDK--NKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDS 118
                + LL +  + H       T ++ A ++  V + + LL         +        
Sbjct: 177 NLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESV------- 229

Query: 119 MVSLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVT 178
                  T     A++    +   L +K+   +  + +G T L   AQ+G +     L+ 
Sbjct: 230 ----QGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIK 285

Query: 179 RGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDT 238
            G  V+A     ++PL  A+  G   +   LL H AD+  +   G+SPL  A+ +GHTD 
Sbjct: 286 HGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDI 345

Query: 239 VALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL---VKKGAKVNVGDKVYGTTP 293
           V LLL   A  N   +   + L  A   GY  +  +L     + + V V DK   + P
Sbjct: 346 VTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFP 403

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (357), Expect = 1e-38
 Identities = 65/273 (23%), Positives = 107/273 (39%), Gaps = 9/273 (3%)

Query: 260 LIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVA 319
           LI A      ++V  L++ GA VN  ++  G TPL  A +    +IV++LL+ GA+  + 
Sbjct: 9   LIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLR 68

Query: 320 GLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPT 379
                 P   +A+A       L       +      G +  +           +      
Sbjct: 69  KKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRG 128

Query: 380 FTFSSLLFVLVM---HLSYGTTPLVWACRKGHVEIVDILL-KAGANVDVA----GLYCWT 431
              +               G T L+ A  KGHVE++ ILL + GA+V+            
Sbjct: 129 ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIH 188

Query: 432 PLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNS-GAYINI 490
            LL +   +   +  LLL++  +VN   + G T L +A +  +  +   LL      IN 
Sbjct: 189 ALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIND 248

Query: 491 QDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDI 523
            D  G + L+ AV+   + I E L K+    D 
Sbjct: 249 TDSDGKTALLLAVELKLKKIAELLCKRGASTDC 281

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (349), Expect = 2e-37
 Identities = 83/318 (26%), Positives = 128/318 (40%), Gaps = 50/318 (15%)

Query: 154 DDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDN-WSPLTYAAREGYTDVCAELLDH 212
           +DN    L+ A Q   +  V++L+  GA+VN ++ +  W+PL  A +    D+   LL H
Sbjct: 4   EDN--HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61

Query: 213 GADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIV 272
           GAD   R   G +P + A+  G    + L L K ADVN    Y  ++ + AA  G  + +
Sbjct: 62  GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL 121

Query: 273 ALLVKKGAKVNVGDKVY---------GTTPLVWACRKGHVEIVDILL-KAGANVDVAGLW 322
             L K+GA VN+  K           G T L+ A  KGHVE++ ILL + GA+V+     
Sbjct: 122 KFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNM 181

Query: 323 AYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTF 382
                                    G  A   +  S     ++         G D     
Sbjct: 182 -------------------------GRNALIHALLSSDDSDVEAITHLLLDHGADVNVRG 216

Query: 383 SSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILL-KAGANVDVAGLYCWTPLLVATLGNF 441
                        G TPL+ A  K H+ +V  LL +    ++       T LL+A     
Sbjct: 217 -----------ERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKL 265

Query: 442 TEVVELLLEYKPNVNALD 459
            ++ ELL +   + +  D
Sbjct: 266 KKIAELLCKRGASTDCGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (327), Expect = 2e-34
 Identities = 81/310 (26%), Positives = 126/310 (40%), Gaps = 30/310 (9%)

Query: 185 AEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRD-MGGWSPLMWASYKGHTDTVALLL 243
           A ++++   L  A +    D+  +LL+ GA++  ++  GGW+PL  A      D V LLL
Sbjct: 2   AVEDNH--LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL 59

Query: 244 DKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHV 303
              AD         +  + AA  G  +++ L + KGA VN  D  YG T  + A   G V
Sbjct: 60  RHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDF-YGFTAFMEAAVYGKV 118

Query: 304 EIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPK 363
           + +  L K GANV++                     G AT L              LL +
Sbjct: 119 KALKFLYKRGANVNLRRKTKEDQERLR--------KGGATALMDAAEKGHVEVLKILLDE 170

Query: 364 LKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVD 423
           +  ++   +  G +                       + +       I  +LL  GA+V+
Sbjct: 171 MGADVNACDNMGRNALIHAL-----------------LSSDDSDVEAITHLLLDHGADVN 213

Query: 424 VAGLYCWTPLLVATLGNFTEVVELLLEYKP-NVNALDKDGCTALTIACKDGYYEIAVLLL 482
           V G    TPL++A       +V+ LLE +   +N  D DG TAL +A +    +IA LL 
Sbjct: 214 VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLC 273

Query: 483 NSGAYINIQD 492
             GA  +  D
Sbjct: 274 KRGASTDCGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (315), Expect = 6e-33
 Identities = 79/321 (24%), Positives = 119/321 (37%), Gaps = 60/321 (18%)

Query: 14  GDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNK 73
            +  LI AV+     +V+ LL+   +V             N  +                
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANV-------------NFQEEEGGW----------- 40

Query: 74  HKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAE 133
                   T ++ AV+     I++LLL    D             +      T     A 
Sbjct: 41  --------TPLHNAVQMSREDIVELLLRHGAD-----------PVLRKKNGATPFLLAAI 81

Query: 134 DNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVN--------- 184
                L     +K    ++ D  G TA M AA  GK+  ++ L  RGA+VN         
Sbjct: 82  AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQ 141

Query: 185 -AEDNDNWSPLTYAAREGYTDVCAELLDH-GADLEHRDMGGWSPLMWASYKGHTDTVA-- 240
                   + L  AA +G+ +V   LLD  GAD+   D  G + L+ A        V   
Sbjct: 142 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAI 201

Query: 241 --LLLDKNADVNAHGNYHISSLIWAAGRGYTEIV-ALLVKKGAKVNVGDKVYGTTPLVWA 297
             LLLD  ADVN  G    + LI A  + +  +V  LL ++  ++N  D   G T L+ A
Sbjct: 202 THLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS-DGKTALLLA 260

Query: 298 CRKGHVEIVDILLKAGANVDV 318
                 +I ++L K GA+ D 
Sbjct: 261 VELKLKKIAELLCKRGASTDC 281

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (279), Expect = 5e-28
 Identities = 76/310 (24%), Positives = 119/310 (38%), Gaps = 39/310 (12%)

Query: 290 GTTPLVWACRKGHVEIVDILLKAGANVDVA-GLWAYMPLYSSALADIFSEPGLATPLTVG 348
               L+ A +   V++V  LL+ GANV+       + PL+++                V 
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSRED--------IVE 56

Query: 349 LYAKWGSGKSFLLPKLKEEMKHFERQGVDP-TFTFSSLLFVLVMHLSYGTTPLVWACRKG 407
           L  + G+                   G       F S    +     YG T  + A   G
Sbjct: 57  LLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYG 116

Query: 408 HVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALT 467
            V+ +  L K GANV++                             +   L K G TAL 
Sbjct: 117 KVKALKFLYKRGANVNLRRKTKE-----------------------DQERLRKGGATALM 153

Query: 468 IACKDGYYEIAVLLL-NSGAYINIQDRSGDSNLIHAVKGGHRGIVEA----LLKKYVDVD 522
            A + G+ E+  +LL   GA +N  D  G + LIHA+       VEA    LL    DV+
Sbjct: 154 DAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN 213

Query: 523 IPGKERKTAVYTAVEKGNVPILKLLLTANP-DLEIATKDGDTPLLKAVKTRNLEAIQMLI 581
           + G+  KT +  AVEK ++ +++ LL     ++     DG T LL AV+ +  +  ++L 
Sbjct: 214 VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLC 273

Query: 582 DKKAKITAVD 591
            + A     D
Sbjct: 274 KRGASTDCGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (271), Expect = 5e-27
 Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 18/254 (7%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYC-WTPLLVATLGNFTEVVELLLEYKPN 454
               L+ A +   V++V  LL+ GANV+       WTPL  A   +  ++VELLL +  +
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD 64

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
                K+G T   +A   G  ++  L L+ GA +N  D  G +  + A   G    ++ L
Sbjct: 65  PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFL 124

Query: 515 LKKYVD----------VDIPGKERKTAVYTAVEKGNVPILKLLLTANP-DLEIATKDGDT 563
            K+  +           +   K   TA+  A EKG+V +LK+LL     D+      G  
Sbjct: 125 YKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN 184

Query: 564 PLLKAVKTRN----LEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKN 619
            L+ A+ + +         +L+D  A +    +RG T L +A+  +   +V+  +     
Sbjct: 185 ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHI 244

Query: 620 NILLYRPNKAGETP 633
            I     +  G+T 
Sbjct: 245 EI--NDTDSDGKTA 256

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (264), Expect = 5e-26
 Identities = 51/252 (20%), Positives = 91/252 (36%), Gaps = 5/252 (1%)

Query: 5   DVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRST 64
           +V+ + +  G + L +AV+     IVE LL+   D  +  K       L     + +   
Sbjct: 30  NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLK 89

Query: 65  TRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCY 124
                  + ++      TA   A   G V  LK L     ++ +  KT    + +     
Sbjct: 90  LFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGA 149

Query: 125 RTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRE----LVTRG 180
             L     + +++ L+  L+      +  D+ G  AL+ A      S V      L+  G
Sbjct: 150 TALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG 209

Query: 181 ADVNAEDNDNWSPLTYAAREGYTDVCAELLDH-GADLEHRDMGGWSPLMWASYKGHTDTV 239
           ADVN       +PL  A  + +  +   LL+    ++   D  G + L+ A         
Sbjct: 210 ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIA 269

Query: 240 ALLLDKNADVNA 251
            LL  + A  + 
Sbjct: 270 ELLCKRGASTDC 281

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 5e-24
 Identities = 63/269 (23%), Positives = 109/269 (40%), Gaps = 27/269 (10%)

Query: 79  ERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDS 138
           E    +  AV+  +V +++ LL    ++    +    +          L + +     D 
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWT---------PLHNAVQMSREDI 54

Query: 139 LQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAA 198
           ++  L +       + +      + AA  G +  ++  +++GADVN  D   ++    AA
Sbjct: 55  VELLLRHGADPVLRKKNGATPF-LLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAA 113

Query: 199 REGYTDVCAELLDHGADLEHRDM----------GGWSPLMWASYKGHTDTVALLLDKN-A 247
             G       L   GA++  R            GG + LM A+ KGH + + +LLD+  A
Sbjct: 114 VYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGA 173

Query: 248 DVNAHGNY----HISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHV 303
           DVNA  N      I +L+ +       I  LL+  GA VNV  +  G TPL+ A  K H+
Sbjct: 174 DVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE-RGKTPLILAVEKKHL 232

Query: 304 EIVDILL-KAGANVDVAGLWAYMPLYSSA 331
            +V  LL +    ++         L  + 
Sbjct: 233 GLVQRLLEQEHIEINDTDSDGKTALLLAV 261

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.7 bits (247), Expect = 9e-24
 Identities = 63/238 (26%), Positives = 112/238 (47%), Gaps = 16/238 (6%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
            G TPL  A +    +IV++LL+ GA+  +      TP L+A +    ++++L L    +
Sbjct: 38  GGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGAD 97

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD----------RSGDSNLIHAVK 504
           VN  D  G TA   A   G  +    L   GA +N++           + G + L+ A +
Sbjct: 98  VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157

Query: 505 GGHRGIVEALLKKY-VDVDIPGKERKTAVYTAVEKGNVP----ILKLLLTANPDLEIATK 559
            GH  +++ LL +   DV+      + A+  A+   +      I  LLL    D+ +  +
Sbjct: 158 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE 217

Query: 560 DGDTPLLKAVKTRNLEAIQMLIDKK-AKITAVDKRGDTVLHIAMRARSKTIVEVFIRN 616
            G TPL+ AV+ ++L  +Q L++++  +I   D  G T L +A+  + K I E+  + 
Sbjct: 218 RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR 275

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.9 bits (214), Expect = 2e-19
 Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 13/160 (8%)

Query: 66  RNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLT---ANPDLEIATKTLPRSDSMVSL 122
           R    +++ +  K   TA+  A EKG+V +LK+LL    A+ +           D+M   
Sbjct: 134 RRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNAC---------DNMGRN 184

Query: 123 CYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTR-GA 181
                     + +++++   L +     + R + G T L+ A +K  L  V+ L+ +   
Sbjct: 185 ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHI 244

Query: 182 DVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDM 221
           ++N  D+D  + L  A       +   L   GA  +  D+
Sbjct: 245 EINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.4 bits (153), Expect = 1e-11
 Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 11/172 (6%)

Query: 461 DGCTALTIACKDGYYEIAVLLLNSGAYINIQD-RSGDSNLIHAVKGGHRGIVEALLKKYV 519
           +    L  A ++   ++   LL  GA +N Q+   G + L +AV+     IVE LL+   
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63

Query: 520 DVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQM 579
           D  +  K   T    A   G+V +LKL L+   D+      G T  ++A     ++A++ 
Sbjct: 64  DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123

Query: 580 LIDKKA----------KITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNI 621
           L  + A              + K G T L  A       ++++ +     ++
Sbjct: 124 LYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV 175

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (139), Expect = 9e-10
 Identities = 32/187 (17%), Positives = 60/187 (32%), Gaps = 40/187 (21%)

Query: 2   CQDDVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKY-VDVDIPGKVRKLSDALNVTDAND 60
              +   +  + G + L+ A + GH  +++ LL +   DV+         D +       
Sbjct: 136 KTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNAC-------DNMGRNALIH 188

Query: 61  QRSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMV 120
              ++ +   +     L +    V    E+G  P                          
Sbjct: 189 ALLSSDDSDVEAITHLLLDHGADVNVRGERGKTP-------------------------- 222

Query: 121 SLCYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRG 180
                 L   + + +L  +Q  LE +    +D D +G TAL+ A +         L  RG
Sbjct: 223 ------LILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG 276

Query: 181 ADVNAED 187
           A  +  D
Sbjct: 277 ASTDCGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (118), Expect = 3e-07
 Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 557 ATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVD-KRGDTVLHIAMRARSKTIVEVFIR 615
           A  + +  L+KAV+  +++ +Q L++  A +   + + G T LH A++   + IVE+ +R
Sbjct: 1   AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLR 60

Query: 616 NPKNN 620
           +  + 
Sbjct: 61  HGADP 65

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  129 bits (324), Expect = 2e-33
 Identities = 55/408 (13%), Positives = 105/408 (25%), Gaps = 78/408 (19%)

Query: 64  TTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLC 123
           T  N+ +      L+     ++  + +  +   +L L      E     LP + +M  + 
Sbjct: 3   TIHNIENYENDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQV- 61

Query: 124 YRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKG---KLSFVRELVTRG 180
            + L  Y A  N ++ Q       + A  +          AA  G    L  +  L+T  
Sbjct: 62  RQLLCLYYAHYNRNAKQ-----LWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSD 116

Query: 181 ADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRD--MGGWSPLMWASYKGHTDT 238
             V     +N+     AA  G+  V   L +              +     A+  GH   
Sbjct: 117 EIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHV 176

Query: 239 VALLLDKNADVNAH---GNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLV 295
           +  L +              + +    A GRG+  ++  L+     +            +
Sbjct: 177 LNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA--------YAEI 228

Query: 296 WACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGS 355
                G   +   + +         L      +  +  D   +    +    G Y     
Sbjct: 229 HEFEYGEKYVNPFIARHV-----NRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYML--- 280

Query: 356 GKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDIL 415
                                                       L+    +  ++ +  L
Sbjct: 281 ------------------------------------------RNLIRRNDEVLLDDIRFL 298

Query: 416 LKAGANVDVAGLYC-----WTPLLVATLGNFTEVVELLLEYKPNVNAL 458
           L       +A            L +A          LLL   P+V AL
Sbjct: 299 LSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI-PSVLAL 345

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  112 bits (280), Expect = 1e-27
 Identities = 44/417 (10%), Positives = 87/417 (20%), Gaps = 110/417 (26%)

Query: 137 DSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTY 196
           +  Q F+                 +     K      + L    A  N      W     
Sbjct: 26  NLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLW----- 80

Query: 197 AAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYH 256
                            +D   + +        A+  G +  +                 
Sbjct: 81  -----------------SDAHKKGIKSEVICFVAAITGCSSAL----------------- 106

Query: 257 ISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANV 316
                        + + LL+     V V            A   GH+ +++ L +     
Sbjct: 107 -------------DTLCLLLTSDEIVKVIQA-ENYQAFRLAAENGHLHVLNRLCELAPTE 152

Query: 317 DVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGV 376
            +A + A                       +          + L      E     +   
Sbjct: 153 IMAMIQAEN----------------YHAFRLAAENGHLHVLNRLCELAPTEATAMIQA-- 194

Query: 377 DPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVA 436
                                     A  +GH  +++ LL     +           +  
Sbjct: 195 -----------------ENYYAFRWAAVGRGHHNVINFLLDCPVML-------AYAEIHE 230

Query: 437 TLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGD 496
                  V   +  +        K+   A  ++  DG +++            +Q     
Sbjct: 231 FEYGEKYVNPFIARH----VNRLKEMHDAFKLSNPDGVFDLV------TKSECLQGFYML 280

Query: 497 SNLIHAVKGGHRGIVEALLKKYVDVDI-----PGKERKTAVYTAVEKGNVPILKLLL 548
            NLI          +  LL       +        +    +  A+  GN     LLL
Sbjct: 281 RNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLL 337

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  100 bits (250), Expect = 9e-24
 Identities = 44/311 (14%), Positives = 76/311 (24%), Gaps = 67/311 (21%)

Query: 9   KRDRSGDSNLIHAVKGGHRGIVE---ALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTT 65
           K+    +     A   G    ++    LL     V              V  A +     
Sbjct: 85  KKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIV-------------KVIQAENY---- 127

Query: 66  RNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYR 125
                            A   A E G++ +L  L    P   +A           +  Y 
Sbjct: 128 ----------------QAFRLAAENGHLHVLNRLCELAPTEIMAMIQ--------AENYH 163

Query: 126 TLQSYIAEDNLDSLQTFLENKRTVADD--RDDNGGTALMFAAQKGKLSFVRELVTRGADV 183
             +      +L  L    E   T A    + +N       A  +G  + +  L+     +
Sbjct: 164 AFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVML 223

Query: 184 NAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLL 243
                       +    G   V   +  H   L+            ++  G  D V    
Sbjct: 224 AY-------AEIHEFEYGEKYVNPFIARHVNRLKE----MHDAFKLSNPDGVFDLV---- 268

Query: 244 DKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDK----VYGTTPLVWACR 299
                    G Y + +LI        + +  L+       +             L  A R
Sbjct: 269 --TKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALR 326

Query: 300 KGHVEIVDILL 310
            G+     +LL
Sbjct: 327 LGNQGACALLL 337

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 98.8 bits (245), Expect = 5e-23
 Identities = 29/235 (12%), Positives = 71/235 (30%), Gaps = 27/235 (11%)

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYC--WTPLLVATLGNFTEVVELLLEY 451
           +        A   GH+ +++ L +      +A +    +    +A       V+  L E 
Sbjct: 124 AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCEL 183

Query: 452 KPNVNAL---DKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHR 508
            P         ++       A   G++ +   LL+    +   +       IH  + G +
Sbjct: 184 APTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAE-------IHEFEYGEK 236

Query: 509 GIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKA 568
            +   + +    +    KE   A   +   G   +            +        L++ 
Sbjct: 237 YVNPFIARHVNRL----KEMHDAFKLSNPDGVFDL------VTKSECLQGFYMLRNLIRR 286

Query: 569 VKTRNLEAIQMLIDKKA-----KITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK 618
                L+ I+ L+             +    + +L +A+R  ++    + +  P 
Sbjct: 287 NDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPS 341

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 44.1 bits (103), Expect = 4e-05
 Identities = 13/161 (8%), Positives = 39/161 (24%), Gaps = 18/161 (11%)

Query: 489 NIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNV--PILKL 546
           NI++   D  L          + +  +    ++ +     K A++  +        + +L
Sbjct: 6   NIENYENDPQLRLIPWILWENLFQHFISAN-ELSLMTLSYKEAIHIFLPGTKNMEQVRQL 64

Query: 547 LLTAN-----------PDLEIATKDGDTPLLKAVK---TRNLEAIQMLIDKKAKITAVDK 592
           L                D        +     A     +  L+ + +L+     +  +  
Sbjct: 65  LCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQA 124

Query: 593 RGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP 633
                  +A       ++           ++          
Sbjct: 125 ENYQAFRLAAENGHLHVLNRLCEL-APTEIMAMIQAENYHA 164

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (286), Expect = 1e-29
 Identities = 48/215 (22%), Positives = 84/215 (39%), Gaps = 35/215 (16%)

Query: 130 YIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRE-------------- 175
                 L+ L+  +   +++A   D +  TAL +A   G    V                
Sbjct: 10  LAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDA 69

Query: 176 -------------------LVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADL 216
                              L+ +GA VNA + +  +PL YAA +   ++   LL+ GA+ 
Sbjct: 70  GWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP 129

Query: 217 EHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLV 276
           + +D    + +  A+ KG+   + +LL   A  N       + L  A      E   LLV
Sbjct: 130 DAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLV 189

Query: 277 KKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLK 311
            +GA + + +K    TPL  A + G   I+  +++
Sbjct: 190 SQGASIYIENK-EEKTPLQVA-KGGLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (274), Expect = 6e-28
 Identities = 64/258 (24%), Positives = 95/258 (36%), Gaps = 43/258 (16%)

Query: 194 LTYAAREGYTDVCAELL-DHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAH 252
           +   A  G  +   E +    +     D    + L WA   GHT+ V  LL     VN  
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 253 GNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKA 312
            +   S L  AA  G  EIV  L+ KGA+VN  ++  G TPL +A  K   EI  +LL+ 
Sbjct: 67  DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQ-NGCTPLHYAASKNRHEIAVMLLEG 125

Query: 313 GANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFE 372
           GAN D    +                          ++     G   ++  L        
Sbjct: 126 GANPDAKDHYEATA----------------------MHRAAAKGNLKMIHILLYYKASTN 163

Query: 373 RQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTP 432
            Q                   + G TPL  AC +  VE   +L+  GA++ +      TP
Sbjct: 164 IQD------------------TEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTP 205

Query: 433 LLVATLGNFTEVVELLLE 450
           L VA  G    +++ ++E
Sbjct: 206 LQVAK-GGLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (261), Expect = 3e-26
 Identities = 54/222 (24%), Positives = 87/222 (39%), Gaps = 37/222 (16%)

Query: 429 CWTPLLVATL---GNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYE--------- 476
           C + L+V  L   G   E+ E +L  K      D+D  TAL  AC  G+ E         
Sbjct: 1   CVSNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLG 60

Query: 477 ------------------------IAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVE 512
                                   I   LL  GA +N  +++G + L +A       I  
Sbjct: 61  VPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAV 120

Query: 513 ALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTR 572
            LL+   + D       TA++ A  KGN+ ++ +LL       I   +G+TPL  A    
Sbjct: 121 MLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEE 180

Query: 573 NLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI 614
            +E  ++L+ + A I   +K   T L +A +     I++  +
Sbjct: 181 RVEEAKLLVSQGASIYIENKEEKTPLQVA-KGGLGLILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.3 bits (246), Expect = 3e-24
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 1/189 (0%)

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKP 453
               T L WAC  GH EIV+ LL+ G  V+      W+PL +A      E+V+ LL    
Sbjct: 35  QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGA 94

Query: 454 NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEA 513
            VNA++++GCT L  A     +EIAV+LL  GA  + +D    + +  A   G+  ++  
Sbjct: 95  QVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHI 154

Query: 514 LLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRN 573
           LL      +I   E  T ++ A ++  V   KLL++    + I  K+  TPL  A     
Sbjct: 155 LLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKG-GL 213

Query: 574 LEAIQMLID 582
              ++ +++
Sbjct: 214 GLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.4 bits (223), Expect = 4e-21
 Identities = 50/158 (31%), Positives = 69/158 (43%), Gaps = 1/158 (0%)

Query: 391 MHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLE 450
                G +PL  A   G  EIV  LL  GA V+       TPL  A   N  E+  +LLE
Sbjct: 65  DKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLE 124

Query: 451 YKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGI 510
              N +A D    TA+  A   G  ++  +LL   A  NIQD  G++ L  A        
Sbjct: 125 GGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEE 184

Query: 511 VEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLL 548
            + L+ +   + I  KE KT +  A + G   ILK ++
Sbjct: 185 AKLLVSQGASIYIENKEEKTPLQVA-KGGLGLILKRMV 221

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  110 bits (276), Expect = 1e-27
 Identities = 58/265 (21%), Positives = 101/265 (38%), Gaps = 20/265 (7%)

Query: 220 DMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKG 279
                +  + A   G T+ V  LL++ AD+N      +++L  A      ++V  LV+ G
Sbjct: 37  KFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENG 96

Query: 280 AKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGAN---VDVAGLWAYMPLYSSALADIF 336
                     G  PL  A   G+++I + L+  GA+   V+  G          A+ ++ 
Sbjct: 97  -ANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELL 155

Query: 337 SEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYG 396
                   + +    K                        D     +S     V H   G
Sbjct: 156 QNEVNRQGVDIEAARKEE----------------ERIMLRDARQWLNSGHINDVRHAKSG 199

Query: 397 TTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVN 456
            T L  A  KG+ E++ +L++A  +V++     WTPL  A      E   +L+E   ++ 
Sbjct: 200 GTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDME 259

Query: 457 ALDKDGCTALTIACKDGYYEIAVLL 481
           A++K G TA  +A +D    +  L 
Sbjct: 260 AVNKVGQTAFDVADEDILGYLEELQ 284

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  101 bits (251), Expect = 3e-24
 Identities = 65/254 (25%), Positives = 106/254 (41%), Gaps = 30/254 (11%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
                + AC  G  E V  LL+ GA+++ A +   T L  A + +  ++V+ L+E   N+
Sbjct: 40  DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANI 99

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDS------------------ 497
           N  D +G   L  A   GY +IA  L++ GA++   +  GD+                  
Sbjct: 100 NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEV 159

Query: 498 ---------NLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLL 548
                          +   R   + L   +++     K   TA++ A  KG   +LKLL+
Sbjct: 160 NRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLI 219

Query: 549 TANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKT 608
            A  D+ I   DG TPL  A      EA ++L++    + AV+K G T   +A       
Sbjct: 220 QARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGY 279

Query: 609 IVEVFIRNPKNNIL 622
           + E+     K N+L
Sbjct: 280 LEEL---QKKQNLL 290

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 99.8 bits (247), Expect = 9e-24
 Identities = 59/260 (22%), Positives = 101/260 (38%), Gaps = 15/260 (5%)

Query: 258 SSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
           +  + A   G TE V  L+++GA +N  +   G T L  AC   +V++V  L++ GAN++
Sbjct: 42  AVFLAACSSGDTEEVLRLLERGADINYANV-DGLTALHQACIDDNVDMVKFLVENGANIN 100

Query: 318 VAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVD 377
                 ++PL+++A                 + A    G + L    +E M+   +  V+
Sbjct: 101 QPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVN 160

Query: 378 PTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVAT 437
                                      R    +    L     N         T L VA 
Sbjct: 161 -------------RQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAA 207

Query: 438 LGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDS 497
              +TEV++LL++ + +VN  D DG T L  A   G  E   +L+ +   +   ++ G +
Sbjct: 208 AKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQT 267

Query: 498 NLIHAVKGGHRGIVEALLKK 517
               A +    G +E L KK
Sbjct: 268 AFDVADE-DILGYLEELQKK 286

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 90.9 bits (224), Expect = 1e-20
 Identities = 54/259 (20%), Positives = 86/259 (33%), Gaps = 17/259 (6%)

Query: 290 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGL 349
                + AC  G  E V  LL+ GA+++ A +     L+ + + D          +   L
Sbjct: 40  DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDD-------NVDMVKFL 92

Query: 350 YAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHV 409
                +                    +D      S    +    S G TPL  A  +   
Sbjct: 93  VENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAME 152

Query: 410 EIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIA 469
           E++         V+  G+               +  + L     N     K G TAL +A
Sbjct: 153 ELLQN------EVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVA 206

Query: 470 CKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERK 529
              GY E+  LL+ +   +NI+D  G + L  A   G       L++   D++   K  +
Sbjct: 207 AAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQ 266

Query: 530 TAVYTAVEKGNVPILKLLL 548
           TA   A E     IL  L 
Sbjct: 267 TAFDVADED----ILGYLE 281

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 88.2 bits (217), Expect = 7e-20
 Identities = 53/278 (19%), Positives = 89/278 (32%), Gaps = 43/278 (15%)

Query: 68  LLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTL 127
           ++ + K K   +       A   G+   +  LL    D+  A                T 
Sbjct: 28  VVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANV-----------DGLTA 76

Query: 128 QSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAED 187
                 D+   +  FL       +  D+ G   L  AA  G L     L+++GA V A +
Sbjct: 77  LHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVN 136

Query: 188 NDNWSPLTYAAREGYTD---------------------------VCAELLDHGADLEHRD 220
           ++  +PL  A  E   +                               L     +     
Sbjct: 137 SEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHA 196

Query: 221 MGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGA 280
             G + L  A+ KG+T+ + LL+    DVN       + L  AA  G  E   +LV+   
Sbjct: 197 KSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLC 256

Query: 281 KVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDV 318
            +   +K  G T    A      +I+  L +     ++
Sbjct: 257 DMEAVNK-VGQTAFDVADE----DILGYLEELQKKQNL 289

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 79.0 bits (193), Expect = 8e-17
 Identities = 44/205 (21%), Positives = 78/205 (38%), Gaps = 28/205 (13%)

Query: 154 DDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHG 213
             + G   + A   G    V  L+ RGAD+N  + D  + L  A  +   D+   L+++G
Sbjct: 37  KFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENG 96

Query: 214 ADLEHRDMGGWSPLMWASYKGHTDTVALLLDKN--------------------------- 246
           A++   D  GW PL  A+  G+ D    L+ +                            
Sbjct: 97  ANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQ 156

Query: 247 ADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIV 306
            +VN  G    ++          +    L           K  G T L  A  KG+ E++
Sbjct: 157 NEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAK-SGGTALHVAAAKGYTEVL 215

Query: 307 DILLKAGANVDVAGLWAYMPLYSSA 331
            +L++A  +V++     + PL+++A
Sbjct: 216 KLLIQARYDVNIKDYDGWTPLHAAA 240

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 49.3 bits (116), Expect = 5e-07
 Identities = 36/183 (19%), Positives = 68/183 (37%), Gaps = 9/183 (4%)

Query: 458 LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKK 517
           +  D       AC  G  E  + LL  GA IN  +  G + L  A    +  +V+ L++ 
Sbjct: 36  VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVEN 95

Query: 518 YVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAI 577
             +++ P  E    ++ A   G + I + L++    +     +GDTPL  A +    E +
Sbjct: 96  GANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELL 155

Query: 578 QMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSID 637
           Q  +         +++G  +           + +        +I   R  K+G T   + 
Sbjct: 156 QNEV---------NRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVA 206

Query: 638 MNN 640
              
Sbjct: 207 AAK 209

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  108 bits (270), Expect = 4e-27
 Identities = 45/312 (14%), Positives = 81/312 (25%), Gaps = 65/312 (20%)

Query: 154 DDNGGTALMFAAQKGKLSFVRELVTRGAD---VNAEDNDNWSPLTYAAREGYTDVCAELL 210
            ++G TAL  A       F+  L+   A    ++ +++   + L  AA  G      +L 
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65

Query: 211 DHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTE 270
             GA +   + GG + L  A          +LL          +    +           
Sbjct: 66  AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLT----------- 114

Query: 271 IVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSS 330
                       +           V +      E           ++             
Sbjct: 115 ---------QSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE------------- 152

Query: 331 ALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLV 390
                               A+   G +         +    +          +   +  
Sbjct: 153 --------------------AENYDGHTP------LHVAVIHKDAEMVRLLRDAGADLNK 186

Query: 391 MHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLE 450
              + G TPL  A       ++++LLKAGA+         TPL  A L     +  LL  
Sbjct: 187 PEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRA 246

Query: 451 YKPNVNALDKDG 462
           +        +DG
Sbjct: 247 HG---APEPEDG 255

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 99.4 bits (246), Expect = 7e-24
 Identities = 49/303 (16%), Positives = 79/303 (26%), Gaps = 62/303 (20%)

Query: 187 DNDNWSPLTYAAREGYTDVCAELLDHGADLEH---RDMGGWSPLMWASYKGHTDTVALLL 243
             D  + L  A    +      LL   A  E+   ++  G + L  A+  G   TV  L 
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65

Query: 244 DKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHV 303
              A V        ++L  A          +L++                          
Sbjct: 66  AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPR------------------- 106

Query: 304 EIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPK 363
           +  D  L    +       A   + S    +   EP       + L A+   G +     
Sbjct: 107 DASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDW-RLQLEAENYDGHTP---- 161

Query: 364 LKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVD 423
               +    +          +   +     + G TPL  A       ++++LLKAGA+  
Sbjct: 162 --LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP- 218

Query: 424 VAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLN 483
                                            A    G T L  A       +A LL  
Sbjct: 219 --------------------------------TARMYGGRTPLGSALLRPNPILARLLRA 246

Query: 484 SGA 486
            GA
Sbjct: 247 HGA 249

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 92.5 bits (228), Expect = 1e-21
 Identities = 48/239 (20%), Positives = 86/239 (35%), Gaps = 18/239 (7%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGAN---VDVAGLYCWTPLLVATLGNFTEVVELLLEYK 452
           G T L  A    H   +D LL   A    +D+      T L +A +      VE L    
Sbjct: 9   GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG 68

Query: 453 PNVNALDKDGCTALTIACKDGYYEIAVLLLNSGA----------YINIQDRSGDSN---- 498
             V   ++ G TAL +AC+   +  A +LL                  QD + D++    
Sbjct: 69  AGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPA 128

Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLL-TANPDLEIA 557
            + +                + ++    +  T ++ AV   +  +++LL        +  
Sbjct: 129 AVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPE 188

Query: 558 TKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN 616
              G TPL  AV+ +    +++L+   A  TA    G T L  A+   +  +  +   +
Sbjct: 189 PTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAH 247

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.1 bits (201), Expect = 4e-18
 Identities = 53/285 (18%), Positives = 86/285 (30%), Gaps = 38/285 (13%)

Query: 6   VSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTT 65
           V       GD+ L  AV   H   ++ LL      +           L++ +        
Sbjct: 1   VFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHE----------YLDLQN-------- 42

Query: 66  RNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSL--- 122
                          +TA++ A   G    ++ L  A   + +A +    +  +      
Sbjct: 43  ------------DLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRA 90

Query: 123 --CYRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRG 180
             C   L         D+  T+L   +      D +   A + +    +           
Sbjct: 91  HTCACVLLQPRPSHPRDASDTYLTQSQDC--TPDTSHAPAAVDSQPNPENEEEPRDEDWR 148

Query: 181 ADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEH-RDMGGWSPLMWASYKGHTDTV 239
             + AE+ D  +PL  A      ++   L D GADL       G +PL  A        +
Sbjct: 149 LQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVL 208

Query: 240 ALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNV 284
            LLL   AD  A      + L  A  R    +  LL   GA    
Sbjct: 209 ELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPE 253

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 81.3 bits (199), Expect = 9e-18
 Identities = 47/208 (22%), Positives = 71/208 (34%), Gaps = 15/208 (7%)

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKP 453
             G T L  A   G    V+ L  AGA V VA     T L +A          +LL+ +P
Sbjct: 43  DLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRP 102

Query: 454 NVNALDKDG--------------CTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNL 499
           +      D                 A   +  +   E      +    +  ++  G + L
Sbjct: 103 SHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPL 162

Query: 500 IHAVKGGHRGIVEALLKKYVDVDI-PGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT 558
             AV      +V  L     D++       +T ++ AVE     +L+LLL A  D     
Sbjct: 163 HVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARM 222

Query: 559 KDGDTPLLKAVKTRNLEAIQMLIDKKAK 586
             G TPL  A+   N    ++L    A 
Sbjct: 223 YGGRTPLGSALLRPNPILARLLRAHGAP 250

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.8 bits (151), Expect = 1e-11
 Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 17/164 (10%)

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGA---YINIQDRSGDSNLIHAVKGGHRGIVE 512
             + +DG TAL +A    +      LL   A   Y+++Q+  G + L  A   G    VE
Sbjct: 3   GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVE 62

Query: 513 ALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTP-------- 564
            L      V +  +   TA++ A          +LL   P       D            
Sbjct: 63  KLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPD 122

Query: 565 ------LLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAM 602
                  + +      E      D + ++ A +  G T LH+A+
Sbjct: 123 TSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAV 166

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.8 bits (112), Expect = 2e-06
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)

Query: 558 TKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKR---GDTVLHIAMR 603
           T+DGDT L  AV  ++   +  L+   A    +D +   G T LH+A  
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAI 54

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.1 bits (105), Expect = 1e-05
 Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 8/106 (7%)

Query: 518 YVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPD---LEIATKDGDTPLLKAVKTRNL 574
           YV      ++  TA++ AV   + P L  LL  +     L++    G T L  A      
Sbjct: 4   YVT-----EDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEA 58

Query: 575 EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNN 620
             ++ L    A +   ++ G T LH+A R R+ T   V ++   ++
Sbjct: 59  STVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSH 104

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 590 VDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETP 633
           V + GDT LH+A+  + +  ++  +     +  L   N  G+T 
Sbjct: 5   VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTA 48

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  107 bits (267), Expect = 2e-26
 Identities = 51/303 (16%), Positives = 97/303 (32%), Gaps = 36/303 (11%)

Query: 159 TALMFAAQKGKLSFVRELVTRGADVNAED-NDNWSPLTYAAREGYTDVCAELLDH----- 212
           + +    +      + E +TR   VN  D   N + L + A     +   +L+ H     
Sbjct: 2   SPIKLHTEAAGSYAITEPITR-ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60

Query: 213 ---GADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYT 269
              GAD+   D    +PLM A        VA L+   AD   +     S+L  AA     
Sbjct: 61  IAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF 120

Query: 270 EIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYS 329
            ++  ++                            +  +++ A          A + +  
Sbjct: 121 GMMVYMLNSTKLKG------------DIEELDRNGMTALMIVAHNEGRDQVASAKLLVEK 168

Query: 330 SALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVL 389
            A  D        +    G  A   + +   +P +K  +                     
Sbjct: 169 GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQD---------- 218

Query: 390 VMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLL 449
                 G TP++ A ++G +E+V  L++ GA+V+       T   +A   N   +V++  
Sbjct: 219 ----EDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFD 274

Query: 450 EYK 452
             +
Sbjct: 275 RCR 277

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 99.4 bits (246), Expect = 9e-24
 Identities = 44/270 (16%), Positives = 82/270 (30%), Gaps = 18/270 (6%)

Query: 263 AAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILL--------KAGA 314
               G   I   + ++   VN+ D  +  T L W       E  + L+         AGA
Sbjct: 8   TEAAGSYAITEPITRES--VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGA 65

Query: 315 NVDVAGLWAYMPLY----SSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKH 370
           +V+        PL     +     +          T+   ++  +       +    M +
Sbjct: 66  DVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVY 125

Query: 371 FERQGVDPTFTFSSLLFVLVMH---LSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGL 427
                             +              V + +    +   +     A  D    
Sbjct: 126 MLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKY 185

Query: 428 YCWTPLLVAT-LGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGA 486
              T L  A  + N   V  L+ E   N +  D+DG T + +A ++G  E+ + L+  GA
Sbjct: 186 KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGA 245

Query: 487 YINIQDRSGDSNLIHAVKGGHRGIVEALLK 516
            +   D +  +    A    H  IV+   +
Sbjct: 246 SVEAVDATDHTARQLAQANNHHNIVDIFDR 275

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 93.3 bits (230), Expect = 1e-21
 Identities = 55/244 (22%), Positives = 96/244 (39%), Gaps = 23/244 (9%)

Query: 395 YGTTPLVWACRKGHVEIVDILL--------KAGANVDVAGLYCWTPLLVATLGNFTEVVE 446
           +  T L W       E  + L+         AGA+V+       TPL++A L     +V 
Sbjct: 32  HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVA 91

Query: 447 LLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIH----A 502
            L++   +    +K   +AL  A  +  + + V +LNS       +    + +      A
Sbjct: 92  YLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVA 151

Query: 503 VKGGHRGIVEALLKKY----------VDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP 552
              G   +  A L                D    + +TA++ A +  N+PI+K L+    
Sbjct: 152 HNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKG 211

Query: 553 DLE-IATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVE 611
             +    +DG TP++ A +   +E +  LI + A + AVD    T   +A       IV+
Sbjct: 212 SNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVD 271

Query: 612 VFIR 615
           +F R
Sbjct: 272 IFDR 275

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 88.3 bits (217), Expect = 7e-20
 Identities = 41/253 (16%), Positives = 85/253 (33%), Gaps = 12/253 (4%)

Query: 3   QDDVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVD------VDIPGKVRKLSDALNVT 56
           ++ V+    R   + L            E L+            D+       +  L + 
Sbjct: 22  RESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLA 81

Query: 57  DAND--QRSTTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLP 114
                 +          +     K  ++A++ A    +  ++  +L +        +   
Sbjct: 82  VLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDR 141

Query: 115 RSDSMVSLCYR---TLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLS 171
              + + +        Q   A+  ++       +     D     G TAL +AAQ   + 
Sbjct: 142 NGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMP 201

Query: 172 FVRELV-TRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWA 230
            V+ LV  +G++ + +D D  +P+  AA+EG  +V   L+  GA +E  D    +    A
Sbjct: 202 IVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLA 261

Query: 231 SYKGHTDTVALLL 243
               H + V +  
Sbjct: 262 QANNHHNIVDIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 80.2 bits (196), Expect = 3e-17
 Identities = 44/274 (16%), Positives = 97/274 (35%), Gaps = 19/274 (6%)

Query: 19  IHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSLK 78
           +H    G   I E + ++ V++      R     L+   +N     + +L+  ++ K   
Sbjct: 6   LHTEAAGSYAITEPITRESVNII---DPRHNRTVLHWIASNSSAEKSEDLIV-HEAKECI 61

Query: 79  ERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDS 138
                V       N P++  +L     L           ++ +   R+     A +    
Sbjct: 62  AAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFG 121

Query: 139 LQTFLENKRTVADDRDD--------------NGGTALMFAAQKGKLSFVRELVTRGADVN 184
           +  ++ N   +  D ++              N G   + +A+       +      A  +
Sbjct: 122 MMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKD 181

Query: 185 AEDNDNWSPLTYAAREGYTD-VCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLL 243
           +E     + L YAA+      V   + + G++ + +D  G +P+M A+ +G  + V  L+
Sbjct: 182 SEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLI 241

Query: 244 DKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
            + A V A      ++   A    +  IV +  +
Sbjct: 242 QQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 275

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 69.8 bits (169), Expect = 1e-13
 Identities = 45/263 (17%), Positives = 91/263 (34%), Gaps = 28/263 (10%)

Query: 398 TPLVWACR-KGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKP--- 453
           +P+       G   I + + +   N+ +   +  T L      +  E  E L+ ++    
Sbjct: 2   SPIKLHTEAAGSYAITEPITRESVNI-IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60

Query: 454 -----NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHR 508
                +VNA+D D  T L +A       +   L+ +GA   I ++S  S L  A      
Sbjct: 61  IAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF 120

Query: 509 GIVEALLKK---YVDVDIPGKERKTAVYTAVEKGNVP-----------ILKLLLTANPDL 554
           G++  +L       D++   +   TA+                       K+        
Sbjct: 121 GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 180

Query: 555 EIATKDGDTPLLKAVKTRNLEAIQMLIDKK-AKITAVDKRGDTVLHIAMRARSKTIVEVF 613
           +     G T L  A +  N+  ++ L+ +K +     D+ G T + +A +     +V   
Sbjct: 181 DSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYL 240

Query: 614 IRNPKNNILLYRPNKAGETPYSI 636
           I+   +   +   +    T   +
Sbjct: 241 IQQGAS---VEAVDATDHTARQL 260

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 94.1 bits (232), Expect = 1e-22
 Identities = 43/212 (20%), Positives = 74/212 (34%), Gaps = 6/212 (2%)

Query: 270 EIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYS 329
           ++++ L+ +GA++N      G T L  A R    +    LL AGA+ +        PL+ 
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLH- 61

Query: 330 SALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVL 389
                            + L  +  +  + +       +               +    +
Sbjct: 62  -----AAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADI 116

Query: 390 VMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLL 449
               + G T L WA    + E V+ILL   AN D       TPL +A      E  + LL
Sbjct: 117 NAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALL 176

Query: 450 EYKPNVNALDKDGCTALTIACKDGYYEIAVLL 481
           +   N    D        +A +  +++I  LL
Sbjct: 177 DNFANREITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 84.8 bits (208), Expect = 2e-19
 Identities = 46/205 (22%), Positives = 73/205 (35%), Gaps = 35/205 (17%)

Query: 139 LQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAA 198
           +   L     +    D  G T+L  AA+  +    + L+  GAD N++DN   +PL  A 
Sbjct: 5   ISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAV 64

Query: 199 REGYTDVCAE----------------------------------LLDHGADLEHRDMGGW 224
                 V                                     L+   AD+   D  G 
Sbjct: 65  AADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGK 124

Query: 225 SPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNV 284
           + L WA+   +T+ V +LL  +A+ +A  +   + L  AA  G  E    L+   A   +
Sbjct: 125 TALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREI 184

Query: 285 GDKVYGTTPLVWACRKGHVEIVDIL 309
            D      P   A  + H +IV +L
Sbjct: 185 TDH-MDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 76.8 bits (187), Expect = 2e-16
 Identities = 43/205 (20%), Positives = 77/205 (37%), Gaps = 2/205 (0%)

Query: 410 EIVDILLKAGANVDVAG-LYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTI 468
           +++  LL  GA ++        T L +A      +  + LL+   + N+ D  G T L  
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHR-GIVEALLKKYVDVDIPGKE 527
           A       +  +LL + A          +  +         G+VE L+    D++     
Sbjct: 63  AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 122

Query: 528 RKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKI 587
            KTA++ A    N   + +LL  + + +      +TPL  A +  + EA + L+D  A  
Sbjct: 123 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 182

Query: 588 TAVDKRGDTVLHIAMRARSKTIVEV 612
              D        +A       IV +
Sbjct: 183 EITDHMDRLPRDVASERLHHDIVRL 207

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 75.6 bits (184), Expect = 3e-16
 Identities = 54/245 (22%), Positives = 83/245 (33%), Gaps = 41/245 (16%)

Query: 205 VCAELLDHGADLEHR-DMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWA 263
           V ++LL  GA+L    D  G + L  A+     D    LLD  AD N+  N   + L  A
Sbjct: 4   VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63

Query: 264 AGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWA 323
                  +  +L++  A         GTTPL+ A R     +V+ L+ A A+++ A    
Sbjct: 64  VAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSG 123

Query: 324 YMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFS 383
              L+                             +  +  L     + + Q         
Sbjct: 124 KTALHW----------------------AAAVNNTEAVNILLMHHANRDAQDD------- 154

Query: 384 SLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTE 443
                         TPL  A R+G  E    LL   AN ++       P  VA+     +
Sbjct: 155 -----------KDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHD 203

Query: 444 VVELL 448
           +V LL
Sbjct: 204 IVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 75.2 bits (183), Expect = 4e-16
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 10/198 (5%)

Query: 78  KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLD 137
           K  +T+++ A         K L                ++S  +     L + +A D + 
Sbjct: 21  KTGETSLHLAARFARADAAKRL----------LDAGADANSQDNTGRTPLHAAVAADAMG 70

Query: 138 SLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYA 197
             Q  L N+ T  + R  +G T L+ AA+      V +L+T  AD+NA DN   + L +A
Sbjct: 71  VFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWA 130

Query: 198 AREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHI 257
           A    T+    LL H A+ + +D    +PL  A+ +G  +    LLD  A+     +   
Sbjct: 131 AAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDR 190

Query: 258 SSLIWAAGRGYTEIVALL 275
                A+ R + +IV LL
Sbjct: 191 LPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 71.0 bits (172), Expect = 1e-14
 Identities = 43/188 (22%), Positives = 66/188 (35%), Gaps = 34/188 (18%)

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCW----------------------- 430
             G T L  A R    +    LL AGA+ +                              
Sbjct: 21  KTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRA 80

Query: 431 -----------TPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAV 479
                      TPL++A       +VE L+    ++NA D  G TAL  A      E   
Sbjct: 81  TNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVN 140

Query: 480 LLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKG 539
           +LL   A  + QD   ++ L  A + G     +ALL  + + +I     +     A E+ 
Sbjct: 141 ILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERL 200

Query: 540 NVPILKLL 547
           +  I++LL
Sbjct: 201 HHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 63.3 bits (152), Expect = 6e-12
 Identities = 39/208 (18%), Positives = 75/208 (36%), Gaps = 13/208 (6%)

Query: 5   DVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNV-TDANDQRS 63
           ++++  D++G+++L  A +       + LL    D +      +      V  DA     
Sbjct: 14  ELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQ 73

Query: 64  TTRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLC 123
                   N +  + +  T +  A       +++ L+TA+ D+  A              
Sbjct: 74  ILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADN-----------S 122

Query: 124 YRTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADV 183
            +T   + A  N       L       D +DD   T L  AA++G     + L+   A+ 
Sbjct: 123 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 182

Query: 184 NAEDNDNWSPLTYAAREGYTDVCAELLD 211
              D+ +  P   A+   + D+   LLD
Sbjct: 183 EITDHMDRLPRDVASERLHHDI-VRLLD 209

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 95.1 bits (235), Expect = 4e-22
 Identities = 38/196 (19%), Positives = 60/196 (30%), Gaps = 20/196 (10%)

Query: 394 SYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNF----TEVVELLL 449
            +G TPL W     ++E+V  L+K G+N         + L+ A              LL 
Sbjct: 105 EHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLD 164

Query: 450 EYKPNVNALDKDGCTALTIACKDGYYE-------------IAVLLLNSGAYINIQDRSGD 496
              P +   D    T L                       +  ++      I       +
Sbjct: 165 YLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKE 224

Query: 497 SNLIHAVKGGHRGIVEALLKKYV---DVDIPGKERKTAVYTAVEKGNVPILKLLLTANPD 553
           S            I+E L  K++    ++       T +  A   GN+ I+  LL    D
Sbjct: 225 SKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD 284

Query: 554 LEIATKDGDTPLLKAV 569
             IA K G  P+    
Sbjct: 285 PFIANKSGLRPVDFGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 93.6 bits (231), Expect = 1e-21
 Identities = 45/305 (14%), Positives = 97/305 (31%), Gaps = 29/305 (9%)

Query: 204 DVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNA-HGNYHISSLIW 262
            +   L     +   + M   + L    +    +    L + +++ N+  G+ +      
Sbjct: 20  KIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHV 79

Query: 263 AAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLW 322
           +      E+          +N+    +G TPL W     ++E+V  L+K G+N       
Sbjct: 80  SFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNM 139

Query: 323 AYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTF 382
                                  +  + A   S  ++     +  + +     +      
Sbjct: 140 GE---------------------SCLVKAVK-SVNNYDSGTFEALLDYLYPCLILEDSMN 177

Query: 383 SSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYC-WTPLLVATLGNF 441
            ++L  +++      T    A +     ++  ++K       +G     +          
Sbjct: 178 RTILHHIIITSGM--TGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERK 235

Query: 442 TEVVELLL---EYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSN 498
             ++E L         +NA D +G T L IA + G   I   LL+ GA   I ++SG   
Sbjct: 236 DSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRP 295

Query: 499 LIHAV 503
           +    
Sbjct: 296 VDFGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 85.9 bits (211), Expect = 5e-19
 Identities = 35/197 (17%), Positives = 59/197 (29%), Gaps = 9/197 (4%)

Query: 78  KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLD 137
           +   T ++      N+ ++K L+    +                       S   E  LD
Sbjct: 105 EHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLD 164

Query: 138 SLQTFLENK----RTVADDRDDNGGTALMFAAQKGKLSFVRELVTR--GADVNAEDNDNW 191
            L   L  +    RT+        G     AA K  L  +   + +     + +  N+  
Sbjct: 165 YLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKE 224

Query: 192 SPLTYAAREGYTDVCAELLDH---GADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNAD 248
           S       E    +   L         L  +D  G + L  A+  G+   V  LLD  AD
Sbjct: 225 SKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD 284

Query: 249 VNAHGNYHISSLIWAAG 265
                   +  + + AG
Sbjct: 285 PFIANKSGLRPVDFGAG 301

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 83.9 bits (206), Expect = 2e-18
 Identities = 46/259 (17%), Positives = 88/259 (33%), Gaps = 25/259 (9%)

Query: 397 TTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFT-EVVELLLEYKPNV 455
              L         E+   L    +N +  G          +  +   EV +     + N+
Sbjct: 40  EAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNL 99

Query: 456 NA-LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGH----RGI 510
           N  +D+ G T L         E+   L+  G+     D  G+S L+ AVK  +       
Sbjct: 100 NIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTF 159

Query: 511 VEALLKKYVDVDIPGKERKTAVYTAVEKGN-------------VPILKLLLTANPDLEIA 557
              L   Y  + +     +T ++  +                 + +  ++   N  ++  
Sbjct: 160 EALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSG 219

Query: 558 TKDGDTPLLKAVKTRNLEAIQMLIDK---KAKITAVDKRGDTVLHIAMRARSKTIVEVFI 614
           T + ++        R    ++ L  K      + A D  GDT L+IA R  + +IV+  +
Sbjct: 220 TNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALL 279

Query: 615 RNPKNNILLYRPNKAGETP 633
               +    +  NK+G  P
Sbjct: 280 DYGAD---PFIANKSGLRP 295

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 80.9 bits (198), Expect = 2e-17
 Identities = 35/230 (15%), Positives = 72/230 (31%), Gaps = 32/230 (13%)

Query: 5   DVSSKRDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRST 64
           +++   D  G++ L       +  +V+ L+K   +           D +  +       +
Sbjct: 98  NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYG-------DNMGESCLVKAVKS 150

Query: 65  TRNLLDKNKHKSLKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCY 124
             N         L      +          +  +++T+                      
Sbjct: 151 VNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGM-------------------- 190

Query: 125 RTLQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTR----G 180
            T  S  A+  LD L  ++  K+        N   +        +   + E +       
Sbjct: 191 -TGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIA 249

Query: 181 ADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWA 230
             +NA+D++  + L  AAR G   +   LLD+GAD    +  G  P+ + 
Sbjct: 250 NMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 71.2 bits (173), Expect = 4e-14
 Identities = 32/254 (12%), Positives = 66/254 (25%), Gaps = 53/254 (20%)

Query: 127 LQSYIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAE 186
           LQ  +  +  +   +   +      +   +       +                 ++N  
Sbjct: 43  LQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIP 102

Query: 187 -DNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGH-------TDT 238
            D    +PL +       ++   L+ HG++  + D  G S L+ A    +          
Sbjct: 103 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEAL 162

Query: 239 VALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVA---------LLVKKGAKVNVGDKVY 289
           +  L       ++     +  +I  +G       A          +VKK  +        
Sbjct: 163 LDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNE 222

Query: 290 GTTPLVWA------------------------------------CRKGHVEIVDILLKAG 313
             +                                          R G++ IVD LL  G
Sbjct: 223 KESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYG 282

Query: 314 ANVDVAGLWAYMPL 327
           A+  +A      P+
Sbjct: 283 ADPFIANKSGLRPV 296

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.0 bits (105), Expect = 1e-05
 Identities = 21/140 (15%), Positives = 46/140 (32%), Gaps = 2/140 (1%)

Query: 481 LLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVY-TAVEKG 539
           L +     N Q    ++ L   +    + +  +L     + +  G          + +  
Sbjct: 25  LPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSL 84

Query: 540 NVPILKLLLTANPDLEIAT-KDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVL 598
              +         +L I   + G+TPL       NLE ++ L+   +     D  G++ L
Sbjct: 85  LQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCL 144

Query: 599 HIAMRARSKTIVEVFIRNPK 618
             A+++ +      F     
Sbjct: 145 VKAVKSVNNYDSGTFEALLD 164

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.7 bits (223), Expect = 3e-21
 Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 9/224 (4%)

Query: 396 GTTPLVWACRKGHVEIVDILLK----AGANVDVAGLYCWTPLLVATLGNFTEVVELLLEY 451
           G TPL  A  +G++  V  L+      G  +D+      TPL +A +     VV LL+  
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62

Query: 452 KPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDR----SGDSNLIHAVKGGH 507
             +  ALD+ G TA  +AC+         LL+S A   +        G + L  AV    
Sbjct: 63  GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC 122

Query: 508 RGIVEALLKKYVDVDIPGK-ERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLL 566
           +  V+ LL++  D+D       ++ +  AVE  ++ +++LLL    ++      G + L 
Sbjct: 123 QETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALH 182

Query: 567 KAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIV 610
            A     L  ++ L+   A  +  +   DT L +A   R   I+
Sbjct: 183 SASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.6 bits (215), Expect = 4e-20
 Identities = 45/264 (17%), Positives = 89/264 (33%), Gaps = 46/264 (17%)

Query: 189 DNWSPLTYAAREGYTDVCAELLD----HGADLEHRDMGGWSPLMWASYKGHTDTVALLLD 244
           D  +PL  A  +G       L++     G +L+  +    +PL  A        V LL+ 
Sbjct: 2   DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 61

Query: 245 KNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVY---GTTPLVWACRKG 301
             A   A   +  ++   A        +  L+   A   +  +     G T L  A    
Sbjct: 62  AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 121

Query: 302 HVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLL 361
             E V +LL+ GA++D   + +       A+ +                           
Sbjct: 122 CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSM---------------------- 159

Query: 362 PKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGAN 421
                 ++   + G +               +  G++ L  A  +G + +V  L+++GA+
Sbjct: 160 ------VQLLLQHGANVN-----------AQMYSGSSALHSASGRGLLPLVRTLVRSGAD 202

Query: 422 VDVAGLYCWTPLLVATLGNFTEVV 445
             +   +  TPL+VA      +++
Sbjct: 203 SSLKNCHNDTPLMVARSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.9 bits (208), Expect = 3e-19
 Identities = 39/215 (18%), Positives = 69/215 (32%), Gaps = 41/215 (19%)

Query: 155 DNGGTALMFAAQKGKLSFVRELVT----RGADVNAEDNDNWSPLTYAAREGYTDVCAELL 210
           ++G T L  A  +G L  V  LV      G +++  +N   +PL  A       V   L+
Sbjct: 1   EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLV 60

Query: 211 DHGADLEHRDMGGWSPLMWASYKGHTDTVAL----------------------------- 241
             GA     D  G +    A        +                               
Sbjct: 61  TAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNT 120

Query: 242 --------LLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTP 293
                   LL++ AD++A       S +  A    +  +  L+ +           G++ 
Sbjct: 121 ECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSA 180

Query: 294 LVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLY 328
           L  A  +G + +V  L+++GA+  +       PL 
Sbjct: 181 LHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLM 215

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.4 bits (204), Expect = 1e-18
 Identities = 47/259 (18%), Positives = 83/259 (32%), Gaps = 40/259 (15%)

Query: 223 GWSPLMWASYKGHTDTVALLLD----KNADVNAHGNYHISSLIWAAGRGYTEIVALLVKK 278
           G +PL  A  +G+   V  L++       +++ + N   + L  A       +V LLV  
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62

Query: 279 GAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSE 338
           GA     D+   T     AC       +  LL + A   +                    
Sbjct: 63  GASPMALDRHGQTAA-HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGL---------- 111

Query: 339 PGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTT 398
               T L V +  +       LL +  +      +                      G +
Sbjct: 112 ----TALHVAVNTECQETVQLLLERGADIDAVDIK---------------------SGRS 146

Query: 399 PLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNAL 458
           PL+ A     + +V +LL+ GANV+       + L  A+      +V  L+    + +  
Sbjct: 147 PLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLK 206

Query: 459 DKDGCTALTIACKDGYYEI 477
           +    T L +A      +I
Sbjct: 207 NCHNDTPLMVARSRRVIDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.6 bits (189), Expect = 1e-16
 Identities = 57/235 (24%), Positives = 94/235 (40%), Gaps = 21/235 (8%)

Query: 81  KTAVYTAVEKGNVPILKLLLTANP----DLEIATKTLPRSDSMVSLCYRTLQSYIAEDNL 136
            T ++ AV +GN+P +  L+        +L+I                +T         L
Sbjct: 4   DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNN-----------LRQTPLHLAVITTL 52

Query: 137 DSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDN----DNWS 192
            S+   L          D +G TA   A +    + +R L+   A    +      D  +
Sbjct: 53  PSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLT 112

Query: 193 PLTYAAREGYTDVCAELLDHGADLEHRDMGGWS-PLMWASYKGHTDTVALLLDKNADVNA 251
            L  A      +    LL+ GAD++  D+     PL+ A        V LLL   A+VNA
Sbjct: 113 ALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNA 172

Query: 252 HGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIV 306
                 S+L  A+GRG   +V  LV+ GA  ++ +  +  TPL+ A  +  ++I+
Sbjct: 173 QMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNC-HNDTPLMVARSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.3 bits (183), Expect = 7e-16
 Identities = 51/260 (19%), Positives = 82/260 (31%), Gaps = 39/260 (15%)

Query: 290 GTTPLVWACRKGHVEIVDILLK----AGANVDVAGLWAYMPLYSSALADIFSEPGLATPL 345
           G TPL  A  +G++  V  L+      G  +D+       PL+   LA I + P +   L
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLH---LAVITTLPSVVRLL 59

Query: 346 TVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACR 405
                +     +                       + +     L      G T L  A  
Sbjct: 60  VTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN 119

Query: 406 KGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTA 465
               E V +LL+ GA++D   +                                    + 
Sbjct: 120 TECQETVQLLLERGADIDAVDIKSG--------------------------------RSP 147

Query: 466 LTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPG 525
           L  A ++    +  LLL  GA +N Q  SG S L  A   G   +V  L++   D  +  
Sbjct: 148 LIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKN 207

Query: 526 KERKTAVYTAVEKGNVPILK 545
               T +  A  +  + IL+
Sbjct: 208 CHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (176), Expect = 5e-15
 Identities = 47/230 (20%), Positives = 84/230 (36%), Gaps = 10/230 (4%)

Query: 14  GDSNLIHAVKGGHRGIVEALLKKYVD--VDIPGKVRKLSDALNVTDANDQRSTTRNLLDK 71
           GD+ L  AV  G+   V  L+  +     ++          L++       S  R L+  
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62

Query: 72  NKHKSLKERKTAVYT--AVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQS 129
                  +R        A E  +   L+ LL +              ++        L  
Sbjct: 63  GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAP------GTLDLEARNYDGLTALHV 116

Query: 130 YIAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDND 189
            +  +  +++Q  LE    +      +G + L+ A +   LS V+ L+  GA+VNA+   
Sbjct: 117 AVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYS 176

Query: 190 NWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTV 239
             S L  A+  G   +   L+  GAD   ++    +PLM A  +   D +
Sbjct: 177 GSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (103), Expect = 1e-05
 Identities = 44/228 (19%), Positives = 72/228 (31%), Gaps = 46/228 (20%)

Query: 461 DGCTALTIACKDGYYEIAVLLLN----SGAYINIQDRSGDSNLIHAVKGGHRGIVEALLK 516
           DG T L IA   G       L+N     G  ++I +    + L  AV      +V  L+ 
Sbjct: 2   DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 61

Query: 517 KYVDVDIPGKERKTAVYTAVEKGNV----------------------------------- 541
                    +  +TA + A E  +                                    
Sbjct: 62  AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 121

Query: 542 ---PILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVL 598
               +  LL        +  K G +PL+ AV+  +L  +Q+L+   A + A    G + L
Sbjct: 122 CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSAL 181

Query: 599 HIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSI-DMNNQKSIL 645
           H A       +V   +R+  +       N   +TP  +        IL
Sbjct: 182 HSASGRGLLPLVRTLVRSGAD---SSLKNCHNDTPLMVARSRRVIDIL 226

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 82.2 bits (201), Expect = 3e-18
 Identities = 41/230 (17%), Positives = 75/230 (32%), Gaps = 9/230 (3%)

Query: 260 LIWAAGRGYTEIVA-LLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDV 318
           L  A        V  LL  K + +   D+  G  PL W+      EI   LL    NV++
Sbjct: 4   LHQACMENEFFKVQELLHSKPSLLLQKDQ-DGRIPLHWSVSFQAHEITSFLLSKMENVNL 62

Query: 319 AGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDP 378
                      +      S   L    ++                +        ++  + 
Sbjct: 63  D--DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEV 120

Query: 379 TFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAG-ANVDVAGLYCWTPLLVAT 437
           +         + +   +   PL  A   G ++++++L   G + V+      WTPL  A 
Sbjct: 121 SQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHAL 180

Query: 438 LGNFTEVVELLLE-YKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGA 486
                +   LL+E Y    + +D  G  A  +A  +   ++    LN+  
Sbjct: 181 AEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLNNVV 227

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.1 bits (180), Expect = 2e-15
 Identities = 52/232 (22%), Positives = 82/232 (35%), Gaps = 8/232 (3%)

Query: 292 TPLVWACRKGHVEIVDILLKA-GANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLY 350
            PL  AC +     V  LL +  + +        +PL+ S      +    +  L+    
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQ--AHEITSFLLSKMEN 59

Query: 351 AKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVE 410
                                    V  +     L   L    + G T L  A  K   E
Sbjct: 60  VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE 119

Query: 411 IVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEY-KPNVNALDKDGCTALTIA 469
           +   L++ GA+V +   +   PL  A      +++ELL    K  VN  DK G T L  A
Sbjct: 120 VSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHA 179

Query: 470 CKDGYYEIAVLLL-NSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVD 520
             +G+ + AVLL+   GA  ++ D  G      A+   +  + +  L   VD
Sbjct: 180 LAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 68.7 bits (166), Expect = 1e-13
 Identities = 37/225 (16%), Positives = 75/225 (33%), Gaps = 44/225 (19%)

Query: 131 IAEDNLDSLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDN 190
             E+    +Q  L +K ++   +D +G   L ++           L+++  +VN +D  +
Sbjct: 8   CMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPD 67

Query: 191 W--------------------------------------SPLTYAAREGYTDVCAELLDH 212
                                                  + L  A  + + +V   L+++
Sbjct: 68  DSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN 127

Query: 213 GADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYH-ISSLIWAAGRGYTEI 271
           GA +  +D     PL  A+  G    + LL           +    + L  A   G+ + 
Sbjct: 128 GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDA 187

Query: 272 VALLVKK-GAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGAN 315
             LLV+K GA+ ++ D   G      A  +   ++    L    +
Sbjct: 188 AVLLVEKYGAEYDLVDN-KGAKAEDVALNE---QVKKFFLNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.5 bits (163), Expect = 3e-13
 Identities = 37/217 (17%), Positives = 69/217 (31%), Gaps = 40/217 (18%)

Query: 159 TALMFAAQKGKLSFVRELV-TRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
             L  A  + +   V+EL+ ++ + +  +D D   PL ++      ++ + LL    ++ 
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 218 HRDMGGW--------------------------------------SPLMWASYKGHTDTV 239
             D                                          + L  A  K   +  
Sbjct: 62  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121

Query: 240 ALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACR 299
             L++  A V     ++   L  AA  G  +++ LL   G          G TPL  A  
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 181

Query: 300 KGHVEIVDILL-KAGANVDVAGLWAYMPLYSSALADI 335
           +GH +   +L+ K GA  D+           +    +
Sbjct: 182 EGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQV 218

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.8 bits (148), Expect = 3e-11
 Identities = 46/218 (21%), Positives = 78/218 (35%), Gaps = 9/218 (4%)

Query: 431 TPLLVATLGNFTEVVELLLEYKP-NVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYIN 489
            PL  A + N    V+ LL  KP  +   D+DG   L  +     +EI   LL+    +N
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 490 IQDRSGDSNLIHAVKGGHR-----GIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPIL 544
           + D   DS                           D++    +  T ++ AV K    + 
Sbjct: 62  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121

Query: 545 KLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDK-KAKITAVDKRGDTVLHIAMR 603
           + L+     + I  K    PL +A    +L+ I++L    K+ +   DK+G T L  A+ 
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 181

Query: 604 ARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQ 641
                   + +        L   +  G     + +N Q
Sbjct: 182 EGHGDAAVLLVEKYGAEYDL--VDNKGAKAEDVALNEQ 217

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 76.8 bits (187), Expect = 4e-17
 Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 2/154 (1%)

Query: 156 NGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGAD 215
           + G  L+ AA+ G+   VR L+  GA     D    SPL  AA+ G+      LL  G  
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFTT-DWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
            + R     +PL  A+ +GH + V +LL   ADVNA     +++L WA    + E+V LL
Sbjct: 60  RDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELL 119

Query: 276 VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDIL 309
           +K GA V+   K +  T    +   G+ ++ +IL
Sbjct: 120 IKYGADVHTQSK-FCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.5 bits (168), Expect = 1e-14
 Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 1/150 (0%)

Query: 398 TPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNA 457
             L+ A R G  + V IL+  GA          +PL +A         E+LL    + +A
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA 62

Query: 458 LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKK 517
             K   T L +A  +G+  I  +LL  GA +N +D    + L  A +  H+ +VE L+K 
Sbjct: 63  RTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122

Query: 518 YVDVDIPGKERKTAVYTAVEKGNVPILKLL 547
             DV    K  KTA   +++ GN  + ++L
Sbjct: 123 GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.3 bits (157), Expect = 5e-13
 Identities = 46/190 (24%), Positives = 67/190 (35%), Gaps = 41/190 (21%)

Query: 292 TPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYA 351
             L+ A R G  + V IL+  GA                                     
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFT---------------------------------- 29

Query: 352 KWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEI 411
               G S L    +          +    +                TPL  A  +GH  I
Sbjct: 30  TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-------DARTKVDRTPLHMAASEGHANI 82

Query: 412 VDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACK 471
           V++LLK GA+V+   +   T L  AT  N  EVVELL++Y  +V+   K   TA  I+  
Sbjct: 83  VEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISID 142

Query: 472 DGYYEIAVLL 481
           +G  ++A +L
Sbjct: 143 NGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.1 bits (128), Expect = 3e-09
 Identities = 32/161 (19%), Positives = 55/161 (34%), Gaps = 12/161 (7%)

Query: 82  TAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQT 141
             +  A   G    +++L+                         +     A+    S   
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDW------------LGTSPLHLAAQYGHFSTTE 51

Query: 142 FLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREG 201
            L       D R     T L  AA +G  + V  L+  GADVNA+D    + L +A    
Sbjct: 52  VLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHN 111

Query: 202 YTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALL 242
           + +V   L+ +GAD+  +     +    +   G+ D   +L
Sbjct: 112 HQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.8 bits (122), Expect = 2e-08
 Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 1/152 (0%)

Query: 461 DGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVD 520
           D    L  A + G  +   +L+ +GA        G S L  A + GH    E LL+  V 
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFTTDWL-GTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 521 VDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQML 580
            D   K  +T ++ A  +G+  I+++LL    D+        T L  A +  + E +++L
Sbjct: 60  RDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELL 119

Query: 581 IDKKAKITAVDKRGDTVLHIAMRARSKTIVEV 612
           I   A +    K   T   I++   ++ + E+
Sbjct: 120 IKYGADVHTQSKFCKTAFDISIDNGNEDLAEI 151

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.1 bits (185), Expect = 7e-17
 Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 1/156 (0%)

Query: 158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLE 217
           G  L  AA +G L  +  L+    +VNA++    +      + G  ++   LL  GA+ +
Sbjct: 2   GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTA-LQVMKLGNPEIARRLLLRGANPD 60

Query: 218 HRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
            +D  G++ +  A+  G  DT+  LL+  ADVN   N     L  AA  G+  +V  LVK
Sbjct: 61  LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVK 120

Query: 278 KGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAG 313
             A         G T    A   G  E+V ++   G
Sbjct: 121 HTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (132), Expect = 8e-10
 Identities = 26/162 (16%), Positives = 41/162 (25%), Gaps = 8/162 (4%)

Query: 258 SSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD 317
           + L  AA RG  E +  L++    VN  +  +G T L                     + 
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNG-FGRTALQVMKLGNPEIARR-------LLL 54

Query: 318 VAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVD 377
                        A+    +  G    L   L  +           L   +   E     
Sbjct: 55  RGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRV 114

Query: 378 PTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAG 419
             F        +      G T    A   G  E+V ++   G
Sbjct: 115 VEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (126), Expect = 5e-09
 Identities = 30/154 (19%), Positives = 48/154 (31%), Gaps = 1/154 (0%)

Query: 395 YGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPN 454
           +G   L  A  +G +E +  LL+   NV+    +  T L V  LGN      LLL     
Sbjct: 1   WGN-ELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANP 59

Query: 455 VNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEAL 514
                         A       +  LL          +       + A +G  R +   +
Sbjct: 60  DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLV 119

Query: 515 LKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLL 548
                +V     +  TA   A   G   ++ L+ 
Sbjct: 120 KHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 153

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (124), Expect = 1e-08
 Identities = 25/166 (15%), Positives = 42/166 (25%), Gaps = 14/166 (8%)

Query: 289 YGTTPLVWACRKGHVEIVDILLKAGANVDVA---GLWAYMPLYSSALADIFSEPGLATPL 345
           +G   L  A  +G +E +  LL+   NV+     G  A   +                  
Sbjct: 1   WGN-ELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANP 59

Query: 346 TVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACR 405
            +     +            + ++       D     +     L +    G   +V    
Sbjct: 60  DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLV 119

Query: 406 KGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEY 451
           K     V      G           T   +A L    EVV L+   
Sbjct: 120 KHTASNVGHRNHKG----------DTACDLARLYGRNEVVSLMQAN 155

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (114), Expect = 2e-07
 Identities = 27/153 (17%), Positives = 41/153 (26%)

Query: 431 TPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINI 490
             L  A      E +  LL+   NVNA +  G TAL +           LLL        
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 491 QDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTA 550
                      A  G    +   L  +        +        A E     +  L+   
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122

Query: 551 NPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDK 583
             ++      GDT    A      E + ++   
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (109), Expect = 1e-06
 Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 13/165 (7%)

Query: 82  TAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQT 141
             + +A  +G++  L  LL  N ++                 +      + +     +  
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNG------------FGRTALQVMKLGNPEIAR 50

Query: 142 FLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREG 201
            L  +    D +D  G   +  AA+ G L  ++ L+   ADVN EDN+   PL  AA+EG
Sbjct: 51  RLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEG 110

Query: 202 YTDVCAEL-LDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDK 245
           +  V   L     +++ HR+  G +    A   G  + V+L+   
Sbjct: 111 HLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (107), Expect = 2e-06
 Identities = 24/153 (15%), Positives = 41/153 (26%)

Query: 464 TALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDI 523
             L  A   G  E    LL +   +N Q+  G + L     G        LL+       
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 524 PGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDK 583
                      A       +  LL           +      L A +        ++   
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122

Query: 584 KAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN 616
            + +   + +GDT   +A       +V +   N
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (90), Expect = 4e-04
 Identities = 21/163 (12%), Positives = 43/163 (26%), Gaps = 11/163 (6%)

Query: 18  LIHAVKGGHRGIVEALLKKYVDVDIPGKVRKLSDALNVTDANDQRSTTRNLLDKNKHKSL 77
           L  A   G    + +LL+  V+V+                        +    +   + L
Sbjct: 5   LASAAARGDLEQLTSLLQNNVNVNAQNG-----------FGRTALQVMKLGNPEIARRLL 53

Query: 78  KERKTAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLD 137
                          V            L+   +     +   +     L     E +L 
Sbjct: 54  LRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLR 113

Query: 138 SLQTFLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRG 180
            ++  +++  +    R+  G TA   A   G+   V  +   G
Sbjct: 114 VVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (188), Expect = 1e-16
 Identities = 44/204 (21%), Positives = 68/204 (33%), Gaps = 45/204 (22%)

Query: 156 NGGTALMFAAQKGKLSFVRELVT----RGADVNAEDNDNWSPLTYAAREGYTDVCAELLD 211
           +G + L  A    + +   E++       A +N ++N   +PL  A      ++   LL 
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 60

Query: 212 HGADLEHRDMGG---------------------------------------WSPLMWASY 232
            G D E RD  G                                        + L  AS 
Sbjct: 61  AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 120

Query: 233 KGHTDTVALLLDKNADVNAHGNYHISS-LIWAAGRGYTEIVALLVKKGAKVNVGDKVYGT 291
            G+   V LL+   ADVNA    +  + L  A      ++V+LL+K GA VN      G 
Sbjct: 121 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTY-QGY 179

Query: 292 TPLVWACRKGHVEIVDILLKAGAN 315
           +P      +    I   L +    
Sbjct: 180 SPYQLTWGRPSTRIQQQLGQLTLE 203

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.3 bits (183), Expect = 6e-16
 Identities = 38/202 (18%), Positives = 66/202 (32%), Gaps = 6/202 (2%)

Query: 290 GTTPLVWACRKGHV----EIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPL 345
           G + L  A          E++  +    A ++        PL+  A+     E   A   
Sbjct: 2   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHL-AVITNQPEIAEALLG 60

Query: 346 TVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACR 405
                       +  L    E+        +  + T   L  +L      G T L  A  
Sbjct: 61  AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 120

Query: 406 KGHVEIVDILLKAGANVDVAGLY-CWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCT 464
            G++ IV++L+  GA+V+        T L +A      ++V LLL+   +VN +   G +
Sbjct: 121 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS 180

Query: 465 ALTIACKDGYYEIAVLLLNSGA 486
              +        I   L     
Sbjct: 181 PYQLTWGRPSTRIQQQLGQLTL 202

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.4 bits (165), Expect = 1e-13
 Identities = 37/239 (15%), Positives = 67/239 (28%), Gaps = 30/239 (12%)

Query: 223 GWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKV 282
           G S L  A                                       E++  +    A +
Sbjct: 2   GDSFLHLAIIHEEKALTM-----------------------------EVIRQVKGDLAFL 32

Query: 283 NVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLA 342
           N  +     TPL  A      EI + LL AG + ++       PL+ +      +  G+ 
Sbjct: 33  NFQNN-LQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVL 91

Query: 343 TPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVW 402
           T      +       +         +              S    V       G T L  
Sbjct: 92  TQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHL 151

Query: 403 ACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKD 461
           A    + ++V +LLK GA+V+      ++P  +      T + + L +       +  +
Sbjct: 152 AVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPE 210

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.0 bits (164), Expect = 2e-13
 Identities = 45/249 (18%), Positives = 83/249 (33%), Gaps = 37/249 (14%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
           G + L  A       +                               EV+  +      +
Sbjct: 2   GDSFLHLAIIHEEKALT-----------------------------MEVIRQVKGDLAFL 32

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
           N  +    T L +A      EIA  LL +G    ++D  G++ L  A + G    V  L 
Sbjct: 33  NFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLT 92

Query: 516 KKYVDVDIPGK------ERKTAVYTAVEKGNVPILKLLLTANPDL-EIATKDGDTPLLKA 568
           +      +            T ++ A   G + I++LL++   D+      +G T L  A
Sbjct: 93  QSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLA 152

Query: 569 VKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNK 628
           V  +N + + +L+   A +  V  +G +   +     S  I +   +    N+ +  P  
Sbjct: 153 VDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQM-LPES 211

Query: 629 AGETPYSID 637
             E  Y  +
Sbjct: 212 EDEESYDTE 220

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (102), Expect = 2e-05
 Identities = 38/187 (20%), Positives = 73/187 (39%), Gaps = 14/187 (7%)

Query: 461 DGCTALTIACKDGYYEIAV----LLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLK 516
           DG + L +A       + +     +    A++N Q+    + L  AV      I EALL 
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 60

Query: 517 KYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEI------ATKDGDTPLLKAVK 570
              D ++      T ++ A E+G +  + +L  +     +         +G T L  A  
Sbjct: 61  AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 120

Query: 571 TRNLEAIQMLIDKKAK-ITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKA 629
              L  +++L+   A         G T LH+A+  ++  +V + ++   +     R    
Sbjct: 121 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV---NRVTYQ 177

Query: 630 GETPYSI 636
           G +PY +
Sbjct: 178 GYSPYQL 184

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.3 bits (176), Expect = 1e-15
 Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 13/139 (9%)

Query: 189 DNWSPLTY---AAREGYTDVCAELLDHGADL------EHRDMGGWSPLMWASY---KGHT 236
           D  + L     A +        +    G DL       +      + L  A     +   
Sbjct: 2   DTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSL 61

Query: 237 DTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVW 296
             V  L+  + +++       ++L +       E + LL++  A + + ++  G TPL  
Sbjct: 62  HIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANE-SGETPLDI 120

Query: 297 ACRKGHVEIVDILLKAGAN 315
           A R  H    ++L +A + 
Sbjct: 121 AKRLKHEHCEELLTQALSG 139

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.9 bits (162), Expect = 1e-13
 Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 10/140 (7%)

Query: 159 TALMFAAQKGKLSFVRELVTRGADVNAE------DNDNWSPLTYAAR---EGYTDVCAEL 209
            +L  A +   +  + +    G D+  +         + + L  A R        +   L
Sbjct: 8   HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67

Query: 210 LDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYT 269
           + +  +L+ +   G + L +     + + + LLL   A +        + L  A    + 
Sbjct: 68  VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE 127

Query: 270 EIVALLVKKGA-KVNVGDKV 288
               LL +  + + N    V
Sbjct: 128 HCEELLTQALSGRFNSHVHV 147

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.9 bits (162), Expect = 1e-13
 Identities = 27/148 (18%), Positives = 51/148 (34%), Gaps = 11/148 (7%)

Query: 116 SDSMVSLCYRTLQSYIAEDNLDSLQTFLE-----NKRTVADDRDDNGGTALMFAAQ---K 167
           +D+   L   +L   +   ++  L           ++    +  +   TAL  A +   +
Sbjct: 1   ADTAAKL--HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDR 58

Query: 168 GKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPL 227
             L  V  LV    +++ +     + L Y       +    LL   A +E  +  G +PL
Sbjct: 59  TSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPL 118

Query: 228 MWASYKGHTDTVALLLDKNAD-VNAHGN 254
             A    H     LL    +   N+H +
Sbjct: 119 DIAKRLKHEHCEELLTQALSGRFNSHVH 146

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.9 bits (136), Expect = 3e-10
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 3/96 (3%)

Query: 394 SYGTTPLVWACR---KGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLE 450
               T L  A R   +  + IVD L++   N+D       T L    L +  E ++LLL 
Sbjct: 43  EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 102

Query: 451 YKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGA 486
            K ++   ++ G T L IA +  +     LL  + +
Sbjct: 103 GKASIEIANESGETPLDIAKRLKHEHCEELLTQALS 138

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.1 bits (126), Expect = 6e-09
 Identities = 29/194 (14%), Positives = 45/194 (23%), Gaps = 51/194 (26%)

Query: 251 AHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKV-----YGTTPLVWACR---KGH 302
           A     + SL  A        +      G  +     +        T L  A R   +  
Sbjct: 1   ADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTS 60

Query: 303 VEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLP 362
           + IVD L++   N+D                                             
Sbjct: 61  LHIVDFLVQNSGNLDKQTGKGSTA------------------------------------ 84

Query: 363 KLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGA-- 420
                         +           + +    G TPL  A R  H    ++L +A +  
Sbjct: 85  ----LHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 140

Query: 421 -NVDVAGLYCWTPL 433
            N  V   Y W  L
Sbjct: 141 FNSHVHVEYEWRLL 154

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.3 bits (124), Expect = 1e-08
 Identities = 28/129 (21%), Positives = 45/129 (34%), Gaps = 9/129 (6%)

Query: 398 TPLVWACRKGHVEIVDILLKAGANVDVAGLYC------WTPLLVATL---GNFTEVVELL 448
             L  A +   +  +      G ++              T L +A          +V+ L
Sbjct: 8   HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67

Query: 449 LEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHR 508
           ++   N++     G TAL   C     E   LLL   A I I + SG++ L  A +  H 
Sbjct: 68  VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE 127

Query: 509 GIVEALLKK 517
              E L + 
Sbjct: 128 HCEELLTQA 136

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.5 bits (96), Expect = 7e-05
 Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 9/132 (6%)

Query: 499 LIHAVKGGHRGIVEALLKKYVDVDIP------GKERKTAVYTAV---EKGNVPILKLLLT 549
           L  AVK      +       VD+          +  +TA++ AV   ++ ++ I+  L+ 
Sbjct: 10  LCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQ 69

Query: 550 ANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTI 609
            + +L+  T  G T L     T N E +++L+  KA I   ++ G+T L IA R + +  
Sbjct: 70  NSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHC 129

Query: 610 VEVFIRNPKNNI 621
            E+  +      
Sbjct: 130 EELLTQALSGRF 141

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.6 bits (161), Expect = 8e-14
 Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 2/127 (1%)

Query: 192 SPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNA 251
           + L  ++ EG  D+   ++    D    +  G + L  A   GHT+ V  L+    +VNA
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 252 HGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTP--LVWACRKGHVEIVDIL 309
             +   + L  AA     ++   LV+ GA V         T         +G+ +    L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 310 LKAGANV 316
                 +
Sbjct: 123 YGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.9 bits (159), Expect = 1e-13
 Identities = 25/127 (19%), Positives = 52/127 (40%), Gaps = 3/127 (2%)

Query: 159 TALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEH 218
             L+ ++ +G+   V+ ++    D +  +++  + L  A   G+T++   L+  G ++  
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 219 RDMGGWSPLMWASYKGHTDTVALLLDKNADVNA---HGNYHISSLIWAAGRGYTEIVALL 275
            D  GW+PL  A+   +      L++  A V A         +        GYT+    L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 276 VKKGAKV 282
                K+
Sbjct: 123 YGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (140), Expect = 5e-11
 Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 3/121 (2%)

Query: 398 TPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNA 457
             L+ +  +G  ++V  ++    +  +      T L  A     TE+V+ L+++  NVNA
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 458 LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSN---LIHAVKGGHRGIVEAL 514
            D DG T L  A      ++   L+ SGA +     S           ++ G+    + L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 515 L 515
            
Sbjct: 123 Y 123

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (123), Expect = 1e-08
 Identities = 13/135 (9%), Positives = 32/135 (23%), Gaps = 12/135 (8%)

Query: 292 TPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYA 351
             L+ +  +G  ++V  ++    +  +        L+++  A             V + A
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 352 KWGSGKSFLLPKLKEE----MKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKG 407
               G + L            K     G             +                +G
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVF--------AMTYSDMQTAADKCEEMEEG 114

Query: 408 HVEIVDILLKAGANV 422
           + +    L      +
Sbjct: 115 YTQCSQFLYGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (106), Expect = 2e-06
 Identities = 25/127 (19%), Positives = 55/127 (43%), Gaps = 3/127 (2%)

Query: 464 TALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDI 523
             L  +  +G +++   ++      ++ +  G + L +AV  GH  IV+ L++  V+V+ 
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 524 PGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT-KDGDTP--LLKAVKTRNLEAIQML 580
              +  T ++ A    NV + K L+ +   +   T  D  T     + ++    +  Q L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 581 IDKKAKI 587
              + K+
Sbjct: 123 YGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (101), Expect = 9e-06
 Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 3/127 (2%)

Query: 431 TPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINI 490
             LL ++L    ++V+ ++    + +  + +G TAL  A   G+ EI   L+  G  +N 
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 491 QDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIP---GKERKTAVYTAVEKGNVPILKLL 547
            D  G + L  A    +  + + L++    V        +        +E+G     + L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 548 LTANPDL 554
                 +
Sbjct: 123 YGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (99), Expect = 1e-05
 Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 14/138 (10%)

Query: 82  TAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQT 141
             +  +  +G   +++ ++    D  +                 T            +  
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPND-----------EGITALHNAVCAGHTEIVK 51

Query: 142 FLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDN---WSPLTYAA 198
           FL       +  D +G T L  AA    +   + LV  GA V A    +    +      
Sbjct: 52  FLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEM 111

Query: 199 REGYTDVCAELLDHGADL 216
            EGYT     L      +
Sbjct: 112 EEGYTQCSQFLYGVQEKM 129

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (160), Expect = 2e-13
 Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 4/155 (2%)

Query: 157 GGTALMFAAQKGKLSFVRELVTR-GADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGAD 215
            G  L  AA +G +  VR L+ R     +A +    +        G T +  ELL  GA 
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTA-LQVMMFGSTAIALELLKQGAS 60

Query: 216 LEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALL 275
              +D  G SP+  A+  G  DT+ +L++  ADVN         +  A   G+T +V+ L
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120

Query: 276 VKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILL 310
             + + ++  D   G TPL  A ++G  ++VDIL 
Sbjct: 121 AAE-SDLHRRDA-RGLTPLELALQRGAQDLVDILQ 153

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (125), Expect = 7e-09
 Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 3/152 (1%)

Query: 398 TPLVWACRKGHVEIVDILL-KAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVN 456
             L  A  +G V+ V  LL +   + D    +  T L V      T +   LL+   + N
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPN 62

Query: 457 ALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLK 516
             D  G + +  A + G+ +   +L+  GA +N+ D +G   + H         V + L 
Sbjct: 63  VQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPI-HLAVQEGHTAVVSFLA 121

Query: 517 KYVDVDIPGKERKTAVYTAVEKGNVPILKLLL 548
              D+        T +  A+++G   ++ +L 
Sbjct: 122 AESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (115), Expect = 1e-07
 Identities = 36/163 (22%), Positives = 57/163 (34%), Gaps = 12/163 (7%)

Query: 82  TAVYTAVEKGNVPILKLLLTANPDLEIATKTLPRSDSMVSLCYRTLQSYIAEDNLDSLQT 141
             +  A  +G+V  ++ LL        A     ++   V +   T  +        S   
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNV 63

Query: 142 FLENKRTVADDRDDNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREG 201
              +  +   D    G    +    +            GADVN  D     P+  A +EG
Sbjct: 64  QDTSGTSPVHDAARTGFLDTLKVLVE-----------HGADVNVPDGTGALPIHLAVQEG 112

Query: 202 YTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLD 244
           +T V + L    +DL  RD  G +PL  A  +G  D V +L  
Sbjct: 113 HTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (103), Expect = 6e-06
 Identities = 28/158 (17%), Positives = 55/158 (34%), Gaps = 11/158 (6%)

Query: 260 LIWAAGRGYTEIVA-LLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDV 318
           L  AA RG  + V  LL ++    +  ++ +G T L           +++L +  +    
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALNR-FGKTALQVMMFGSTAIALELLKQGASPNVQ 64

Query: 319 AGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDP 378
                  P++ +A         +       +    G+G   +   ++E            
Sbjct: 65  DT-SGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123

Query: 379 TFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILL 416
           +         L    + G TPL  A ++G  ++VDIL 
Sbjct: 124 SD--------LHRRDARGLTPLELALQRGAQDLVDILQ 153

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (102), Expect = 9e-06
 Identities = 26/160 (16%), Positives = 47/160 (29%), Gaps = 10/160 (6%)

Query: 292 TPLVWACRKGHVEIVDILL-KAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLY 350
             L  A  +G V+ V  LL +   + D    +    L             L         
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALEL--------L 55

Query: 351 AKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVE 410
            +  S                    +D           + +    G  P+  A ++GH  
Sbjct: 56  KQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTA 115

Query: 411 IVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLE 450
           +V  L  A +++        TPL +A      ++V++L  
Sbjct: 116 VVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (96), Expect = 5e-05
 Identities = 32/156 (20%), Positives = 67/156 (42%), Gaps = 4/156 (2%)

Query: 460 KDGCTALTIACKDGYYEIAVLLLNS-GAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKY 518
           + G   L+ A   G  +    LL+    + +  +R G +  +  +  G   I   LLK+ 
Sbjct: 1   RAG-DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTA-LQVMMFGSTAIALELLKQG 58

Query: 519 VDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQ 578
              ++      + V+ A   G +  LK+L+    D+ +    G  P+  AV+  +   + 
Sbjct: 59  ASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVS 118

Query: 579 MLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI 614
            L   ++ +   D RG T L +A++  ++ +V++  
Sbjct: 119 FLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (132), Expect = 4e-10
 Identities = 23/129 (17%), Positives = 38/129 (29%), Gaps = 7/129 (5%)

Query: 290 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGL 349
               L  A  +G VE V  LL+AGAN +    +   P+    +        L        
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62

Query: 350 YAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHV 409
            A   +    +    +E                        +  ++G  P+  A   GH 
Sbjct: 63  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLD-------VRDAWGRLPVDLAEELGHR 115

Query: 410 EIVDILLKA 418
           ++   L  A
Sbjct: 116 DVARYLRAA 124

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (132), Expect = 5e-10
 Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 3/127 (2%)

Query: 186 EDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDK 245
           E + +W  L  AA  G  +    LL+ GA+    +  G  P+             LLL  
Sbjct: 1   EPSADW--LATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHG 58

Query: 246 NADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEI 305
                A        +  AA  G+ + + +L + GA+++V D  +G  P+  A   GH ++
Sbjct: 59  AEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDA-WGRLPVDLAEELGHRDV 117

Query: 306 VDILLKA 312
              L  A
Sbjct: 118 ARYLRAA 124

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (129), Expect = 1e-09
 Identities = 24/121 (19%), Positives = 45/121 (37%)

Query: 155 DNGGTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGA 214
           +     L  AA +G++  VR L+  GA+ NA ++    P+              LL    
Sbjct: 1   EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60

Query: 215 DLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVAL 274
                      P+  A+ +G  DT+ +L    A ++    +    +  A   G+ ++   
Sbjct: 61  PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARY 120

Query: 275 L 275
           L
Sbjct: 121 L 121

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (116), Expect = 6e-08
 Identities = 33/120 (27%), Positives = 53/120 (44%)

Query: 396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNV 455
               L  A  +G VE V  LL+AGAN +    Y   P+ V  +G+      LLL      
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62

Query: 456 NALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALL 515
            A        +  A ++G+ +  V+L  +GA ++++D  G   +  A + GHR +   L 
Sbjct: 63  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (89), Expect = 3e-04
 Identities = 24/120 (20%), Positives = 40/120 (33%)

Query: 431 TPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINI 490
             L  A      E V  LLE   N NA +  G   + +          +LLL+       
Sbjct: 5   DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCA 64

Query: 491 QDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTA 550
              +    +  A + G    +  L +    +D+     +  V  A E G+  + + L  A
Sbjct: 65  DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAA 124

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (88), Expect = 3e-04
 Identities = 25/121 (20%), Positives = 40/121 (33%)

Query: 462 GCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDV 521
               L  A   G  E    LL +GA  N  +  G   +   + G  R     LL      
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62

Query: 522 DIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLI 581
                     V+ A  +G +  L +L  A   L++    G  P+  A +  + +  + L 
Sbjct: 63  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122

Query: 582 D 582
            
Sbjct: 123 A 123

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.3 bits (105), Expect = 2e-06
 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 4/119 (3%)

Query: 398 TPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNA 457
              +WA + G ++ V   +  G +V+        PL  A      E++E LL    ++NA
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63

Query: 458 LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLK 516
            DK   T L  A  +G+     LLL+ GA   ++   G + L           ++ALL+
Sbjct: 64  PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEAT----DNQAIKALLQ 118

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.5 bits (90), Expect = 2e-04
 Identities = 16/121 (13%), Positives = 34/121 (28%), Gaps = 7/121 (5%)

Query: 292 TPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYA 351
              +WA + G ++ V   +  G +V+        PL+ +A                 + A
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63

Query: 352 KWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEI 411
                 + LL  + E      +  +              +    G T L     +    +
Sbjct: 64  PDKHHITPLLSAVYEGHVSCVKLLLSKGADK-------TVKGPDGLTALEATDNQAIKAL 116

Query: 412 V 412
           +
Sbjct: 117 L 117

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.6 bits (85), Expect = 7e-04
 Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 4/119 (3%)

Query: 159 TALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEH 218
              M+A + G L  V++ V +G DVN        PL YAA  G  ++   LL  GAD+  
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63

Query: 219 RDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVK 277
            D    +PL+ A Y+GH   V LLL K AD    G   +++L         + +  L++
Sbjct: 64  PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATD----NQAIKALLQ 118

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.8 bits (83), Expect = 0.002
 Identities = 30/117 (25%), Positives = 52/117 (44%)

Query: 495 GDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDL 554
            D   + A+K G    V+  + K  DV+   +  +  ++ A + G + IL+ LL    D+
Sbjct: 2   CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI 61

Query: 555 EIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVE 611
               K   TPLL AV   ++  +++L+ K A  T     G T L        K +++
Sbjct: 62  NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIKALLQ 118

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	651
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	100.0
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	100.0
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	100.0
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	100.0
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	100.0
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.98
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.97
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.97
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.97
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.96
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.95
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.95
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.95
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.94
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.94
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.94
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.93
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.93
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.92
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.92
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.91
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.91
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.9
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.89
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.89
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.89
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.87

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-55  Score=438.50  Aligned_cols=387  Identities=32%  Similarity=0.415  Sum_probs=367.6

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcCCHH
Q psy11819        158 GTALMFAAQKGKLSFVRELVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTD  237 (651)
Q Consensus       158 ~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~  237 (651)
                      .||||.||..|+.++|++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.++.+|.|||++|+..|+.+
T Consensus         1 ~TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~g~~~   80 (408)
T d1n11a_           1 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTN   80 (408)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHH
T ss_pred             CChHHHHHHCcCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHH
Confidence            38999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Q psy11819        238 TVALLLDKNADVNAHGNYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVD  317 (651)
Q Consensus       238 ~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~  317 (651)
                      ++++|+..+.+.........+++..+...+...........+......+. .+.++++.|+..++.+++++|++++.+++
T Consensus        81 ~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~a~~~~~~~~v~~ll~~~~~~~  159 (408)
T d1n11a_          81 MVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTK-KGFTPLHVAAKYGKVRVAELLLERDAHPN  159 (408)
T ss_dssp             HHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred             HHHHHHHhhhccccccccccchhhhhhhhccccccccccccccccccccc-ccchHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            99999999998888888888999999999999988888888888877766 68999999999999999999999998876


Q ss_pred             cccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCC
Q psy11819        318 VAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGT  397 (651)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (651)
                      ..+                                                                         ..+.
T Consensus       160 ~~~-------------------------------------------------------------------------~~~~  166 (408)
T d1n11a_         160 AAG-------------------------------------------------------------------------KNGL  166 (408)
T ss_dssp             CCC-------------------------------------------------------------------------SSCC
T ss_pred             cCC-------------------------------------------------------------------------CcCc
Confidence            543                                                                         4578


Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHH
Q psy11819        398 TPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEI  477 (651)
Q Consensus       398 t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~  477 (651)
                      +||+.|+..|+.+++++|+++|++++..+..+.+|++.+......++...++..+......+..+.||++.|+..+..++
T Consensus       167 ~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~  246 (408)
T d1n11a_         167 TPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEM  246 (408)
T ss_dssp             CHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             hHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcchhhhccchhhhhhhhhhccccccccCCCCCCHHHHHHHhCcHhH
Confidence            99999999999999999999999999999999999999999999999999999998888888999999999999999999


Q ss_pred             HHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcccc
Q psy11819        478 AVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIA  557 (651)
Q Consensus       478 ~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~  557 (651)
                      ++++.+.+...+..+..|.||++.|+..++.+++++|+++|++++..+..+.||||.++..++.++++++++.|++++.+
T Consensus       247 ~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~  326 (408)
T d1n11a_         247 VALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAK  326 (408)
T ss_dssp             HHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCC
T ss_pred             hhhhhccccccccccCCCCChhhhhhhcCcHHHHHHHHHCCCccccccccccccchhhcccCcceeeeeecccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCC
Q psy11819        558 TKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPK  618 (651)
Q Consensus       558 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~  618 (651)
                      |.+|+||||+|+++|+.++|++|+++||+++.+|+.|.||||+|+++|+.++|++|..-..
T Consensus       327 d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~~~~~iv~~L~~~~~  387 (408)
T d1n11a_         327 TKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTD  387 (408)
T ss_dssp             CTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHCC
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999999987754443

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-53  Score=426.46  Aligned_cols=381  Identities=30%  Similarity=0.385  Sum_probs=360.2

Q ss_pred             CCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCcHHHHHHhcChHH
Q psy11819        191 WSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMWASYKGHTDTVALLLDKNADVNAHGNYHISSLIWAAGRGYTE  270 (651)
Q Consensus       191 ~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~a~~~~~~~  270 (651)
                      .||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+
T Consensus         1 ~TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~g~~~   80 (408)
T d1n11a_           1 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTN   80 (408)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHH
T ss_pred             CChHHHHHHCcCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHH
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchh
Q psy11819        271 IVALLVKKGAKVNVGDKVYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLY  350 (651)
Q Consensus       271 ~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (651)
                      ++++|+..+.+...... ....++..+...+...........+......+                              
T Consensus        81 ~~~~Ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------  129 (408)
T d1n11a_          81 MVKLLLENNANPNLATT-AGHTPLHIAAREGHVETVLALLEKEASQACMT------------------------------  129 (408)
T ss_dssp             HHHHHHHHTCCTTCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC------------------------------
T ss_pred             HHHHHHHhhhccccccc-cccchhhhhhhhcccccccccccccccccccc------------------------------
Confidence            99999999887766665 57889999999888888887777766554332                              


Q ss_pred             cccCCCcccchhhHHHHHHHHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCC
Q psy11819        351 AKWGSGKSFLLPKLKEEMKHFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCW  430 (651)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~  430 (651)
                                                                 ..+.++++.|+..++.+++++|+++|.+++..+..+.
T Consensus       130 -------------------------------------------~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~  166 (408)
T d1n11a_         130 -------------------------------------------KKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGL  166 (408)
T ss_dssp             -------------------------------------------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCC
T ss_pred             -------------------------------------------cccchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCcCc
Confidence                                                       4477999999999999999999999999999999999


Q ss_pred             hHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHH
Q psy11819        431 TPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGI  510 (651)
Q Consensus       431 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~  510 (651)
                      +||+.|+..++.+++++|+++|++++..+..|.||++.+......+...+++..+......+..+.||++.|+..+..++
T Consensus       167 ~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~  246 (408)
T d1n11a_         167 TPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEM  246 (408)
T ss_dssp             CHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             hHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcchhhhccchhhhhhhhhhccccccccCCCCCCHHHHHHHhCcHhH
Confidence            99999999999999999999999999999999999999999999999999999998888889999999999999999999


Q ss_pred             HHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccc
Q psy11819        511 VEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAV  590 (651)
Q Consensus       511 v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~  590 (651)
                      +++++..+...+..+..|.||++.|+..++.+++++|+++|++++..+..+.||||.|+..++.++++++++.|++++.+
T Consensus       247 ~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~  326 (408)
T d1n11a_         247 VALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAK  326 (408)
T ss_dssp             HHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCC
T ss_pred             hhhhhccccccccccCCCCChhhhhhhcCcHHHHHHHHHCCCccccccccccccchhhcccCcceeeeeecccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccccchhhhhc
Q psy11819        591 DKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQE  648 (651)
Q Consensus       591 d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~  648 (651)
                      |..|+||||+|+++|+.++|++|+++|++   ++.+|..|+||||+|+++|+..+++.
T Consensus       327 d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd---~n~~d~~G~t~L~~A~~~~~~~iv~~  381 (408)
T d1n11a_         327 TKLGYSPLHQAAQQGHTDIVTLLLKNGAS---PNEVSSDGTTPLAIAKRLGYISVTDV  381 (408)
T ss_dssp             CTTSCCHHHHHHHTTCHHHHHHHHHTTCC---SCCCCSSSCCHHHHHHHTTCHHHHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence            99999999999999999999999999998   77899999999999999999888764

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-37  Score=274.48  Aligned_cols=219  Identities=26%  Similarity=0.299  Sum_probs=193.8

Q ss_pred             CChHHHHHHHcCCHHHHHHHH-HcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCc
Q psy11819        396 GTTPLVWACRKGHVEIVDILL-KAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGY  474 (651)
Q Consensus       396 ~~t~l~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~  474 (651)
                      +.+.++.++..|+.+.++.++ +.+..++.+|..|+||||+|+..|+.+++++|++.+......+..+.++++.++..++
T Consensus         3 ~~~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (223)
T d1uoha_           3 SNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGR   82 (223)
T ss_dssp             SSSHHHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTCCCHHHHHHHHTC
T ss_pred             CHHHHHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhcccccccccccccccccccccccccccccccc
Confidence            357888889999988887666 4566788888899999999999999999999999888888888888899999999999


Q ss_pred             HHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCc
Q psy11819        475 YEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDL  554 (651)
Q Consensus       475 ~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~  554 (651)
                      .+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..++.+++++|++.+.++
T Consensus        83 ~~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i  162 (223)
T d1uoha_          83 DEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKAST  162 (223)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred             cchhHHHhccCceeEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcCCcchhhhhcccccee
Confidence            99999999999999989999999999999999999999999999999888889999999999999999999999999999


Q ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHh
Q psy11819        555 EIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIR  615 (651)
Q Consensus       555 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~  615 (651)
                      +..|..|+||||+|+..|+.++|++|+++|++++.+|.+|+||||+|. .++.+|+++|++
T Consensus       163 ~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~tpl~~A~-~~~~~i~~~Ll~  222 (223)
T d1uoha_         163 NIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAK-GGLGLILKRMVE  222 (223)
T ss_dssp             CCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHCC-TTHHHHHHHHHC
T ss_pred             eeccCCCCceeccccccCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHH-CCCHHHHhcccC
Confidence            999999999999999999999999999999999999999999999884 688889988885

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-36  Score=270.75  Aligned_cols=216  Identities=25%  Similarity=0.282  Sum_probs=203.4

Q ss_pred             CChHHHHHHhcCcHHHHHHHHh-cCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCc
Q psy11819        429 CWTPLLVATLGNFTEVVELLLE-YKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGH  507 (651)
Q Consensus       429 ~~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~  507 (651)
                      +.++++.++..|+.+.++.+++ .+..++.+|..|+||||+|+..|+.+++++|++.+......+..+.++++.++..++
T Consensus         3 ~~~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (223)
T d1uoha_           3 SNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGR   82 (223)
T ss_dssp             SSSHHHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTCCCHHHHHHHHTC
T ss_pred             CHHHHHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhcccccccccccccccccccccccccccccccc
Confidence            4578899999999988866654 567889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q psy11819        508 RGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKI  587 (651)
Q Consensus       508 ~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~  587 (651)
                      .+++++|+++|++++..|.+|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.|+++
T Consensus        83 ~~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i  162 (223)
T d1uoha_          83 DEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKAST  162 (223)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred             cchhHHHhccCceeEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcCCcchhhhhcccccee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccccchhhhhc
Q psy11819        588 TAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQE  648 (651)
Q Consensus       588 ~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~  648 (651)
                      +..|..|+||||+|+..|+.+++++|+++|++   ++++|..|+||||+|. +++..++++
T Consensus       163 ~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad---~~~~d~~g~tpl~~A~-~~~~~i~~~  219 (223)
T d1uoha_         163 NIQDTEGNTPLHLACDEERVEEAKLLVSQGAS---IYIENKEEKTPLQVAK-GGLGLILKR  219 (223)
T ss_dssp             CCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---SCCCCTTSCCHHHHCC-TTHHHHHHH
T ss_pred             eeccCCCCceeccccccCcHHHHHHHHHCCCC---CCCCCCCCCCHHHHHH-CCCHHHHhc
Confidence            99999999999999999999999999999998   7889999999999995 577766654

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-34  Score=269.87  Aligned_cols=273  Identities=31%  Similarity=0.387  Sum_probs=209.6

Q ss_pred             CchHHHHHHHcCCHHHHHHHHhcCCCCCCcC-CCCCcHHHHHHhcChHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC
Q psy11819        223 GWSPLMWASYKGHTDTVALLLDKNADVNAHG-NYHISSLIWAAGRGYTEIVALLVKKGAKVNVGDKVYGTTPLVWACRKG  301 (651)
Q Consensus       223 ~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~~~t~L~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~~l~~a~~~~  301 (651)
                      +.|+|+.|+..|+.++|++|+++|++++.++ ..|+||||+|+..|+.+++++|++.+........ .+.+|...+...+
T Consensus         5 ~~~~L~~Ai~~~~~e~vk~Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~-~~~~~~~~~~~~~   83 (285)
T d1wdya_           5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKK-NGATPFLLAAIAG   83 (285)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHT
T ss_pred             CcHHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhcccccccccccc-ccchhhHHHhhcC
Confidence            4678888888888888888888888887654 4577888888888888888888888777766665 5777788888888


Q ss_pred             CHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHHHHHHcCCCCccc
Q psy11819        302 HVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMKHFERQGVDPTFT  381 (651)
Q Consensus       302 ~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (651)
                      ..+...++++...+....                                                              
T Consensus        84 ~~~~~~~~~~~~~~~~~~--------------------------------------------------------------  101 (285)
T d1wdya_          84 SVKLLKLFLSKGADVNEC--------------------------------------------------------------  101 (285)
T ss_dssp             CHHHHHHHHHTTCCTTCB--------------------------------------------------------------
T ss_pred             Cccccchhhhhccccccc--------------------------------------------------------------
Confidence            887777777765443211                                                              


Q ss_pred             hhhhHHHHHhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCC
Q psy11819        382 FSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKD  461 (651)
Q Consensus       382 ~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~  461 (651)
                                 +..+.++++.|+..+....+..+++...+++.........                       ......
T Consensus       102 -----------~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~  147 (285)
T d1wdya_         102 -----------DFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQ-----------------------ERLRKG  147 (285)
T ss_dssp             -----------CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHH-----------------------HHTTCC
T ss_pred             -----------ccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhh-----------------------hhhccc
Confidence                       1335677777877777777777777766655433221110                       012346


Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhC-CCCCcccCCCCCcHHHHHHh----cCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHH
Q psy11819        462 GCTALTIACKDGYYEIAVLLLNS-GAYINIQDRSGDSNLIHAVK----GGHRGIVEALLKKYVDVDIPGKERKTAVYTAV  536 (651)
Q Consensus       462 g~t~l~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~l~~A~~----~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~  536 (651)
                      |.||||+|++.|+.+++++|+++ |++++..+..|.++...+..    .+..+++++|+++|++++.++..|.||||+|+
T Consensus       148 g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~  227 (285)
T d1wdya_         148 GATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAV  227 (285)
T ss_dssp             CCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHH
T ss_pred             CchHHHHHHHcCCHHHHHHHHhccCCCcccccCCCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCCCccchhh
Confidence            78899999999999999999865 78888888888887776544    34557888899999988888888999999999


Q ss_pred             HcCCHHHHHHHHhc-CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Q psy11819        537 EKGNVPILKLLLTA-NPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDK  592 (651)
Q Consensus       537 ~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~  592 (651)
                      +.|+.+++++|++. |++++.+|.+|+||||+|+++|+.++|++|+++||+++++|.
T Consensus       228 ~~~~~~~v~~lL~~~g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d~  284 (285)
T d1wdya_         228 EKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL  284 (285)
T ss_dssp             HTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred             hcCcHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Confidence            99999999998874 888988888999999999999999999999999999888774

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-35  Score=274.67  Aligned_cols=227  Identities=22%  Similarity=0.205  Sum_probs=187.9

Q ss_pred             cCCCChHHHHHHHcCCHHHHHHHHHcCCC---CCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q psy11819        393 LSYGTTPLVWACRKGHVEIVDILLKAGAN---VDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIA  469 (651)
Q Consensus       393 ~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~---~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A  469 (651)
                      +.+|.||||.|+.+|+.+++++|+++|++   ++..+..|.||||+|+..++.+++++|+++|++++..+.+|.|||++|
T Consensus         6 ~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A   85 (255)
T d1oy3d_           6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLA   85 (255)
T ss_dssp             CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHH
T ss_pred             CcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccccccccccccccccchhhhhh
Confidence            46799999999999999999999999987   556778899999999999999999999999999999999999999999


Q ss_pred             HHcCcHHHHHHHHhCCCCCcccCCC----------CCcHHHHHHhcCc----HHHHHHHHhcCCCCCCCCCCCCCHHHHH
Q psy11819        470 CKDGYYEIAVLLLNSGAYINIQDRS----------GDSNLIHAVKGGH----RGIVEALLKKYVDVDIPGKERKTAVYTA  535 (651)
Q Consensus       470 ~~~~~~~~~~~Ll~~g~~~~~~~~~----------~~t~l~~A~~~~~----~~~v~~Ll~~~~~~~~~~~~g~t~l~~A  535 (651)
                      +..++.+++++|++.+.........          ..+....+.....    ..........+.+++.++.+|.||||+|
T Consensus        86 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A  165 (255)
T d1oy3d_          86 CRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVA  165 (255)
T ss_dssp             TTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHH
T ss_pred             hccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCccccccc
Confidence            9999999999999876543321110          0111111111111    1112222224667788999999999999


Q ss_pred             HHcCCHHHHHHHHhcCCCccc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHH
Q psy11819        536 VEKGNVPILKLLLTANPDLEI-ATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFI  614 (651)
Q Consensus       536 ~~~~~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll  614 (651)
                      +..++.+++++|++.+++++. .+..|.||||+|++.|+.++|++|+++|++++.+|..|+||||+|+.+++.+++++|+
T Consensus       166 ~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~~d~~g~t~L~~A~~~~~~~i~~~Ll  245 (255)
T d1oy3d_         166 VIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLR  245 (255)
T ss_dssp             HHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHH
T ss_pred             ccccccccccchhcccccccccccccccccccccccccHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Confidence            999999999999999998875 4678999999999999999999999999999999999999999999999999999999


Q ss_pred             hCCCC
Q psy11819        615 RNPKN  619 (651)
Q Consensus       615 ~~~~~  619 (651)
                      ++|+.
T Consensus       246 ~~Ga~  250 (255)
T d1oy3d_         246 AHGAP  250 (255)
T ss_dssp             HTTCC
T ss_pred             HcCCC
Confidence            99986

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-33  Score=265.80  Aligned_cols=263  Identities=28%  Similarity=0.397  Sum_probs=237.5

Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCcccccccccccchHHHHhchhcCCCCCCcchhchhcccCCCcccchhhHHHHHH
Q psy11819        290 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLWAYMPLYSSALADIFSEPGLATPLTVGLYAKWGSGKSFLLPKLKEEMK  369 (651)
Q Consensus       290 ~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (651)
                      +.|+|+.|+.+|+.+++++|+++|++++...                                                 
T Consensus         5 ~~~~L~~Ai~~~~~e~vk~Ll~~G~din~~~-------------------------------------------------   35 (285)
T d1wdya_           5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQE-------------------------------------------------   35 (285)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHTTCCTTCCC-------------------------------------------------
T ss_pred             CcHHHHHHHHcCCHHHHHHHHHCCCCcCccC-------------------------------------------------
Confidence            5589999999999999999999999987543                                                 


Q ss_pred             HHHHcCCCCccchhhhHHHHHhhcCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHH
Q psy11819        370 HFERQGVDPTFTFSSLLFVLVMHLSYGTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLL  449 (651)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll  449 (651)
                                             +..|.||||.|+..|+.+++++|++.+......+....+|.+.+...+..+...+++
T Consensus        36 -----------------------~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (285)
T d1wdya_          36 -----------------------EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFL   92 (285)
T ss_dssp             -----------------------TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred             -----------------------CCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhhcCCccccchhh
Confidence                                   144889999999999999999999999999988889999999999999999999999


Q ss_pred             hcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccC----------CCCCcHHHHHHhcCcHHHHHHHHhc-C
Q psy11819        450 EYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQD----------RSGDSNLIHAVKGGHRGIVEALLKK-Y  518 (651)
Q Consensus       450 ~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~----------~~~~t~l~~A~~~~~~~~v~~Ll~~-~  518 (651)
                      ++..+....+..+.++++.|+..+....++.++....+++...          ..|.|||+.|+..|+.+++++|+++ |
T Consensus        93 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~  172 (285)
T d1wdya_          93 SKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMG  172 (285)
T ss_dssp             HTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSC
T ss_pred             hhcccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHHcCCHHHHHHHHhccC
Confidence            9988877788899999999999999999999998877665443          4589999999999999999999975 8


Q ss_pred             CCCCCCCCCCCCHHHHHHHcC----CHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCC
Q psy11819        519 VDVDIPGKERKTAVYTAVEKG----NVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDK-KAKITAVDKR  593 (651)
Q Consensus       519 ~~~~~~~~~g~t~l~~A~~~~----~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~  593 (651)
                      ++++..+..|.+++..+...+    ..+++++|+++|++++.++..|.||||+|+..|+.++|++|++. |++++.+|.+
T Consensus       173 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~~g~din~~d~~  252 (285)
T d1wdya_         173 ADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSD  252 (285)
T ss_dssp             CCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTT
T ss_pred             CCcccccCCCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCCCccchhhhcCcHHHHHHHHHcCCCCCcCCCCC
Confidence            899999999999888765433    45799999999999999999999999999999999999999985 9999999999


Q ss_pred             CCcHHHHHHHcCChHHHHHHHhCCCCcccccCCC
Q psy11819        594 GDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPN  627 (651)
Q Consensus       594 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~  627 (651)
                      |.||||+|+++++.+++++|+++|++   ++.+|
T Consensus       253 G~TpL~~A~~~~~~eiv~~Ll~~GAd---~n~~d  283 (285)
T d1wdya_         253 GKTALLLAVELKLKKIAELLCKRGAS---TDCGD  283 (285)
T ss_dssp             SCCHHHHHHHTTCHHHHHHHHHHSSC---SCCSS
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCC---CCccc
Confidence            99999999999999999999999999   55555

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1e-33  Score=261.60  Aligned_cols=94  Identities=22%  Similarity=0.262  Sum_probs=59.4

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCchHHHH
Q psy11819        153 RDDNGGTALMFAAQKGKLSFVRELVTRGAD---VNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRDMGGWSPLMW  229 (651)
Q Consensus       153 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~---~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~L~~  229 (651)
                      .+.+|+||||+||..|+.++|++|++.|++   ++..+..|.||||+|+..|+.+++++|++.|++++..+..|.|||++
T Consensus         5 i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tpL~~   84 (255)
T d1oy3d_           5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHL   84 (255)
T ss_dssp             CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHH
T ss_pred             CCcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccccccccccccccccchhhhh
Confidence            355666666666666666666666666555   34455566666666666666666666666666666666666666666


Q ss_pred             HHHcCCHHHHHHHHhcC
Q psy11819        230 ASYKGHTDTVALLLDKN  246 (651)
Q Consensus       230 A~~~~~~~~v~~Ll~~~  246 (651)
                      |+..++.+++++|++.+
T Consensus        85 A~~~~~~~~~~~Ll~~~  101 (255)
T d1oy3d_          85 ACRVRAHTCACVLLQPR  101 (255)
T ss_dssp             HTTTTCHHHHHHHSSSC
T ss_pred             hhccCchHHHHHHHhhc
Confidence            66666666666665543

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.4e-33  Score=254.44  Aligned_cols=219  Identities=23%  Similarity=0.270  Sum_probs=192.8

Q ss_pred             hHHHHHHHcCCHHHHHHHHHc-CCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCC---CCCCCCCcHHHHHHHcC
Q psy11819        398 TPLVWACRKGHVEIVDILLKA-GANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVN---ALDKDGCTALTIACKDG  473 (651)
Q Consensus       398 t~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~---~~~~~g~t~l~~A~~~~  473 (651)
                      +|||.||..|+.+.++.|++. +.+++.++.+|+||||+|+..++.+++++|+++|++++   ..+..|.+|++++...+
T Consensus         2 ~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~   81 (229)
T d1ixva_           2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVG   81 (229)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHHHT
T ss_pred             HhHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHcCCccccchhhhhhcccccccccccccccccccccccc
Confidence            799999999999999988874 57888889999999999999999999999999998875   45667889999999999


Q ss_pred             cHHHHHHHHhCCCCCc--ccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy11819        474 YYEIAVLLLNSGAYIN--IQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTAN  551 (651)
Q Consensus       474 ~~~~~~~Ll~~g~~~~--~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~  551 (651)
                      ..++++.++..+...+  ..+..+.++++.++..++.+++++|++.+.+.+..+..|+||||+|+..|+.+++++|++.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~  161 (229)
T d1ixva_          82 NLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG  161 (229)
T ss_dssp             CHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTT
T ss_pred             ccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhcccccccccccccc
Confidence            9999999988876544  45667889999999999999999999999999989999999999999999999999999987


Q ss_pred             -CCccccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCC
Q psy11819        552 -PDLEIATKDGDTPLLKAVKTRNLEAIQMLID-KKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKN  619 (651)
Q Consensus       552 -~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~  619 (651)
                       .+++.+|.+|+||||+|+.+|+.++|++|++ .|++++.+|..|+||||+|+.   .+++++|+++|.+
T Consensus       162 ~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~---~~~~~~Ll~~g~d  228 (229)
T d1ixva_         162 KSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNNVVD  228 (229)
T ss_dssp             CCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSCCTGGGCSC---HHHHHHHHHHCCC
T ss_pred             cccccccccccCCchhhhcccccHHHHHHHHHhcCCCCCCcCCCCCCHHHHHhh---HHHHHHHHHcCCC
Confidence             5788899999999999999999999999997 499999999999999999974   5789999998864

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=100.00  E-value=6e-33  Score=261.96  Aligned_cols=207  Identities=27%  Similarity=0.288  Sum_probs=149.0

Q ss_pred             hHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHH
Q psy11819        431 TPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGI  510 (651)
Q Consensus       431 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~  510 (651)
                      |+|+.|+..|+.+++++|+++|++++..|.+|.||||+|+..|+.+++++|+++|.++...+..+.+||+.|+..++.++
T Consensus        42 t~l~~A~~~G~~~~v~~Ll~~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~~~~~~~  121 (291)
T d1s70b_          42 AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDI  121 (291)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred             hHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHhcCCceeeeeecccccccccccccccccccccccccccch
Confidence            55555555555666665555555555555555566666666556666666665555555555555556665555555566


Q ss_pred             HHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh---------------------------cCCCccccCCCCCc
Q psy11819        511 VEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLT---------------------------ANPDLEIATKDGDT  563 (651)
Q Consensus       511 v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~---------------------------~~~~~~~~~~~g~t  563 (651)
                      +++|+++|...+..+.++.+++++|+..+..+.++.++.                           ...+....+..|.|
T Consensus       122 ~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t  201 (291)
T d1s70b_         122 AEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGT  201 (291)
T ss_dssp             HHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCC
T ss_pred             hhcccccCcccccccccCccccccccccccchhccccccccccccccccccccccccccchhhhcccccccccccCCCCC
Confidence            655555555555555555555555555555555555443                           23344567788999


Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccc
Q psy11819        564 PLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNN  640 (651)
Q Consensus       564 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~  640 (651)
                      |||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.++|++|+++|++   ++.+|..|+||||+|.++
T Consensus       202 ~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gad---v~~~d~~G~TaL~~A~e~  275 (291)
T d1s70b_         202 ALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCD---MEAVNKVGQTAFDVADED  275 (291)
T ss_dssp             HHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCTTTSCCSG
T ss_pred             hhhHHHHcCChhhhcccccceecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999998   788999999999999873

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=100.00  E-value=1.2e-33  Score=266.86  Aligned_cols=219  Identities=29%  Similarity=0.381  Sum_probs=203.2

Q ss_pred             CChHHHHHHHcCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH
Q psy11819        396 GTTPLVWACRKGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYY  475 (651)
Q Consensus       396 ~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~  475 (651)
                      +.|+|+.||..|+.++|++|+++|++++..+..|+||||+|+..|+.+++++|+++|.+....+..+.+||+.++..++.
T Consensus        40 ~~t~l~~A~~~G~~~~v~~Ll~~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~~~~~  119 (291)
T d1s70b_          40 DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYL  119 (291)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHhcCCceeeeeeccccccccccccccccccccccccccc
Confidence            56899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhc-C--------------------------CCCCCCCCCC
Q psy11819        476 EIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKK-Y--------------------------VDVDIPGKER  528 (651)
Q Consensus       476 ~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~-~--------------------------~~~~~~~~~g  528 (651)
                      +++++|+++|+..+..+..+.+++++|+..+..+.++.++.. +                          .+....+..|
T Consensus       120 ~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  199 (291)
T d1s70b_         120 DIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSG  199 (291)
T ss_dssp             HHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTC
T ss_pred             chhhcccccCcccccccccCccccccccccccchhccccccccccccccccccccccccccchhhhcccccccccccCCC
Confidence            999999999999999999999999999999999988888753 2                          2234567789


Q ss_pred             CCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChH
Q psy11819        529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKT  608 (651)
Q Consensus       529 ~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~  608 (651)
                      .||||.|+..|+.+++++|++.|++++.++..|+||||+|+..|+.++|++|+++|++++.+|..|.||||+|++    +
T Consensus       200 ~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~d~~G~TaL~~A~e----~  275 (291)
T d1s70b_         200 GTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE----D  275 (291)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS----G
T ss_pred             CChhhHHHHcCChhhhcccccceecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH----H
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999974    5


Q ss_pred             HHHHHHhCCC
Q psy11819        609 IVEVFIRNPK  618 (651)
Q Consensus       609 ~~~~Ll~~~~  618 (651)
                      ++++|.+..+
T Consensus       276 ~~~~L~~~~~  285 (291)
T d1s70b_         276 ILGYLEELQK  285 (291)
T ss_dssp             GGHHHHHHHH
T ss_pred             HHHHHHHHhh
Confidence            7777766543

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.7e-33  Score=263.92  Aligned_cols=203  Identities=27%  Similarity=0.365  Sum_probs=168.9

Q ss_pred             HHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCC---CCCc
Q psy11819        413 DILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSG---AYIN  489 (651)
Q Consensus       413 ~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g---~~~~  489 (651)
                      +.+++.|+++|.++..|+||||+|+..++.+++++|+++|++++.++.+|.||++.|+..++.++++++...+   ..++
T Consensus        58 ~~~l~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~  137 (277)
T d2fo1e1          58 KECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIE  137 (277)
T ss_dssp             HHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTS
T ss_pred             hHHHHcCCCccccCCCCCeeeccccccccccccccccccccccccccccccccccchhhhcchhhhhhhhhccccccccc
Confidence            4556778888888888888888888888888888888888888888888888888888888888888887653   3455


Q ss_pred             ccCCCCCcHHHHHHhcCcHH---HHHHHHhcCC--------CCCCCCCCCCCHHHHHHHcCCHHHHHHHH-hcCCCcccc
Q psy11819        490 IQDRSGDSNLIHAVKGGHRG---IVEALLKKYV--------DVDIPGKERKTAVYTAVEKGNVPILKLLL-TANPDLEIA  557 (651)
Q Consensus       490 ~~~~~~~t~l~~A~~~~~~~---~v~~Ll~~~~--------~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll-~~~~~~~~~  557 (651)
                      ..+..+.++.+.+...+..+   .+..+.+...        ..+..+..|.|+||+++..++.+++++++ ..+.+++.+
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~  217 (277)
T d2fo1e1         138 ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQ  217 (277)
T ss_dssp             CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCC
T ss_pred             ccccccchhHHHHHhcccccccccccccccccccccccccccccccccCCCCcccccccccccccccccccccccccccc
Confidence            66777788888877766543   4444444322        23456678999999999999999998755 567888899


Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHh
Q psy11819        558 TKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIR  615 (651)
Q Consensus       558 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~  615 (651)
                      |..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+++|+.+++++|++
T Consensus       218 d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~~~~~~iv~lL~~  275 (277)
T d2fo1e1         218 DEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR  275 (277)
T ss_dssp             CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999985

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.2e-32  Score=245.04  Aligned_cols=209  Identities=22%  Similarity=0.214  Sum_probs=192.6

Q ss_pred             ChHHHHHHhcCcHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcc---cCCCCCcHHHHHHhc
Q psy11819        430 WTPLLVATLGNFTEVVELLLEY-KPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINI---QDRSGDSNLIHAVKG  505 (651)
Q Consensus       430 ~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~---~~~~~~t~l~~A~~~  505 (651)
                      ++|||.|+..|+.++++.|++. +.+++.+|.+|.||||+|+..|+.+++++|+++|++++.   .+..|.+|+++++..
T Consensus         1 n~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~   80 (229)
T d1ixva_           1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV   80 (229)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred             CHhHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHcCCccccchhhhhhccccccccccccccccccccccc
Confidence            4799999999999999999884 578899999999999999999999999999999999864   466789999999999


Q ss_pred             CcHHHHHHHHhcCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy11819        506 GHRGIVEALLKKYVDV--DIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDK  583 (651)
Q Consensus       506 ~~~~~v~~Ll~~~~~~--~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  583 (651)
                      +..++++.++..+...  ...+..+.++++.++..++.+++++|++.|.+.+..+..|+||||+|+..|+.+++++|++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~  160 (229)
T d1ixva_          81 GNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGL  160 (229)
T ss_dssp             TCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred             cccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhccccccccccccc
Confidence            9999999999987654  45677889999999999999999999999999999999999999999999999999999998


Q ss_pred             C-CCCcccCCCCCcHHHHHHHcCChHHHHHHHhC-CCCcccccCCCCCCCCccccccccc
Q psy11819        584 K-AKITAVDKRGDTVLHIAMRARSKTIVEVFIRN-PKNNILLYRPNKAGETPYSIDMNNQ  641 (651)
Q Consensus       584 g-a~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~g~t~l~~a~~~~  641 (651)
                      | .+++.+|..|.||||+|+..++.+++++|+++ |++   ++++|..|+||||+|++++
T Consensus       161 ~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad---~~~~d~~g~t~l~~A~~~~  217 (229)
T d1ixva_         161 GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE---YDLVDNKGAKAEDVALNEQ  217 (229)
T ss_dssp             TCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC---SCCCCTTSCCTGGGCSCHH
T ss_pred             ccccccccccccCCchhhhcccccHHHHHHHHHhcCCC---CCCcCCCCCCHHHHHhhHH
Confidence            7 68899999999999999999999999999975 777   7789999999999999754

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.98  E-value=1.4e-32  Score=257.62  Aligned_cols=248  Identities=19%  Similarity=0.215  Sum_probs=210.5

Q ss_pred             hHHHHHHH-cCCHHHHHHHHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHH--------HhcCCCCCCCCCCCCcHHHH
Q psy11819        398 TPLVWACR-KGHVEIVDILLKAGANVDVAGLYCWTPLLVATLGNFTEVVELL--------LEYKPNVNALDKDGCTALTI  468 (651)
Q Consensus       398 t~l~~A~~-~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L--------l~~~~~~~~~~~~g~t~l~~  468 (651)
                      |||+.++. .|..++++.|.+.+++... ..+|+||||+|+..|+.+++++|        ++.|++++.+|.+|.||||+
T Consensus         2 ~p~~~~~~~~~~~~~~~~l~~~~~n~~~-~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G~TpLh~   80 (277)
T d2fo1e1           2 SPIKLHTEAAGSYAITEPITRESVNIID-PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLML   80 (277)
T ss_dssp             CCCHHHHHHHSSSCCCSCCSTTTTTTCC-CSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHH
T ss_pred             ChHHHHHHhCCCHHHHHHHHhcCCCcCC-CCCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCccccCCCCCeeecc
Confidence            67775554 4666677777677666432 24699999999999999888776        56799999999999999999


Q ss_pred             HHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcC---CCCCCCCCCCCCHHHHHHHcCCHH---
Q psy11819        469 ACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKY---VDVDIPGKERKTAVYTAVEKGNVP---  542 (651)
Q Consensus       469 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~---~~~~~~~~~g~t~l~~A~~~~~~~---  542 (651)
                      |+..|+.+++++|+++|++++.++..|.||++.|+..++.++++++...+   ..++..+..+.++.+.+...+..+   
T Consensus        81 A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (277)
T d2fo1e1          81 AVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVA  160 (277)
T ss_dssp             HHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHH
T ss_pred             ccccccccccccccccccccccccccccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhcccccccc
Confidence            99999999999999999999999999999999999999999999998753   356677888899999998877544   


Q ss_pred             HHHHHHhcCCC--------ccccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCcHHHHHHHcCChHHHHHH
Q psy11819        543 ILKLLLTANPD--------LEIATKDGDTPLLKAVKTRNLEAIQMLI-DKKAKITAVDKRGDTVLHIAMRARSKTIVEVF  613 (651)
Q Consensus       543 ~v~~Ll~~~~~--------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~L  613 (651)
                      .+..+.+....        .+..+..|+||||+++..++.+++++++ ..|.+.+..|..|.||||+|+..|+.+++++|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~L  240 (277)
T d2fo1e1         161 SAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYL  240 (277)
T ss_dssp             HHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred             cccccccccccccccccccccccccCCCCccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence            45555554322        4456778999999999999999998765 56889999999999999999999999999999


Q ss_pred             HhCCCCcccccCCCCCCCCcccccccccchhhhhcc
Q psy11819        614 IRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQEC  649 (651)
Q Consensus       614 l~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~  649 (651)
                      +++|++   ++.+|..|+||||+|+++++.++++.+
T Consensus       241 l~~gad---in~~d~~G~T~L~~A~~~~~~~iv~lL  273 (277)
T d2fo1e1         241 IQQGAS---VEAVDATDHTARQLAQANNHHNIVDIF  273 (277)
T ss_dssp             HHTTCC---SSCCCSSSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHCcCC---CCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence            999988   788999999999999999999888764

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.6e-31  Score=237.76  Aligned_cols=193  Identities=21%  Similarity=0.193  Sum_probs=164.9

Q ss_pred             CCChHHHHHHhcCcH----HHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHH
Q psy11819        428 YCWTPLLVATLGNFT----EVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAV  503 (651)
Q Consensus       428 ~~~t~l~~a~~~~~~----~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~  503 (651)
                      +|.||||+|+..++.    ++++.+...+++++..|.+|.||||+|+..|+.+++++|+++|++++..+..|.|||+.++
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~~   80 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC   80 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHH
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCcccCCCCCCcccccccccccccccccccccccccccccccccccccccc
Confidence            467888888877764    4555666778888888999999999999999999999999999999999999999999999


Q ss_pred             hcCcHHHHHHHHhcCCCC------CCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccC-CCCCcHHHHHHHcCCHHH
Q psy11819        504 KGGHRGIVEALLKKYVDV------DIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIAT-KDGDTPLLKAVKTRNLEA  576 (651)
Q Consensus       504 ~~~~~~~v~~Ll~~~~~~------~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~~  576 (651)
                      ..++.++++.|++.+...      ......|.||||.|+..++.+++++|+..|+.++..+ .+|+||||+|+..|+.++
T Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~  160 (221)
T d1iknd_          81 EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL  160 (221)
T ss_dssp             HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred             ccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHH
Confidence            999999999998875443      3345568899999999999999999999999988665 579999999999999999


Q ss_pred             HHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCc
Q psy11819        577 IQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNN  620 (651)
Q Consensus       577 v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~  620 (651)
                      +++|+++|+|++.+|..|+||||+|+..++.+++++|++...++
T Consensus       161 v~~Ll~~gad~~~~~~~G~tpl~~A~~~~~~~~~~~l~~~~~~~  204 (221)
T d1iknd_         161 VSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN  204 (221)
T ss_dssp             HHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGG
T ss_pred             HHHHHhcCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCcc
Confidence            99999999999999999999999999999999999999987654

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.97  E-value=4.7e-30  Score=228.88  Aligned_cols=205  Identities=23%  Similarity=0.285  Sum_probs=184.8

Q ss_pred             HHHHHHHHHcCCCCCC-cCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy11819        409 VEIVDILLKAGANVDV-AGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAY  487 (651)
Q Consensus       409 ~~~v~~Ll~~~~~~~~-~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~  487 (651)
                      .++|++|+++|++++. .|.+|.||||+|+..|+.+++++|++.|++++..+..+.++++.++..+..............
T Consensus         2 ~~~v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (209)
T d1ot8a_           2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRAT   81 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTC
T ss_pred             HHHHHHHHHCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhcccccccccccccccccccccccccccccccccccc
Confidence            4789999999999987 478999999999999999999999999999999999999999999999988877776655332


Q ss_pred             -CcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHH
Q psy11819        488 -INIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLL  566 (651)
Q Consensus       488 -~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~  566 (651)
                       .......+.++.+.+.........+.|...+.+++.++..|.|||++++..+..++++.+++.+.+++..|..|.||||
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~  161 (209)
T d1ot8a_          82 NLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLF  161 (209)
T ss_dssp             CTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred             ccccccccccccccccccccchhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeeccccccccccccccccccc
Confidence             3334556788899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHH
Q psy11819        567 KAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVF  613 (651)
Q Consensus       567 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~L  613 (651)
                      +|+..|+.++|++|+++|++++..|..|.||||+|+++|+.++|++|
T Consensus       162 ~A~~~g~~~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         162 LAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             hhccccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence            99999999999999999999999999999999999999999999986

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.5e-29  Score=224.48  Aligned_cols=217  Identities=23%  Similarity=0.272  Sum_probs=166.8

Q ss_pred             CCChHHHHHHhcCcHHHHHHHH----hcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHH
Q psy11819        428 YCWTPLLVATLGNFTEVVELLL----EYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAV  503 (651)
Q Consensus       428 ~~~t~l~~a~~~~~~~~~~~Ll----~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~  503 (651)
                      +|+||||+|+..++.++++.|+    +.|++++..|.+|.||||+|+..|+.+++++|+++|++++.....+.++++.|.
T Consensus         2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a~   81 (228)
T d1k1aa_           2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC   81 (228)
T ss_dssp             TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhccccccccccccccccccccccccccccccccc
Confidence            3556666666666665555554    467777777788888888888888888888888888888877777888888888


Q ss_pred             hcCcHHHHHHHHhcCC----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcc-ccCCCCCcHHHHHHHcCCHHHHH
Q psy11819        504 KGGHRGIVEALLKKYV----DVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLE-IATKDGDTPLLKAVKTRNLEAIQ  578 (651)
Q Consensus       504 ~~~~~~~v~~Ll~~~~----~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~  578 (651)
                      ..++.++++.+.....    ..+.......++++.+.........+.|.....+.. .....+.+||+.|+..+...+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~  161 (228)
T d1k1aa_          82 EHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQ  161 (228)
T ss_dssp             HTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHH
T ss_pred             ccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhh
Confidence            8888877777766432    233445566788888888888888888887766543 44557788888888888888888


Q ss_pred             HHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccccchhhhh
Q psy11819        579 MLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQ  647 (651)
Q Consensus       579 ~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~  647 (651)
                      ++++.|.+++.+|..|.||||+|+..|+.+++++|+++|++   ++.+|..|+||||+|+++++..+++
T Consensus       162 ~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad---~n~~d~~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         162 LLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD---SSLKNCHNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             HHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred             hhhhhccccccccccCcchHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHhCCCccccC
Confidence            88888888888888888888888888888888888888887   6678888888888888888877764

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-29  Score=228.74  Aligned_cols=217  Identities=27%  Similarity=0.349  Sum_probs=198.0

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHH----cCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q psy11819        395 YGTTPLVWACRKGHVEIVDILLK----AGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIAC  470 (651)
Q Consensus       395 ~~~t~l~~A~~~~~~~~v~~Ll~----~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~  470 (651)
                      +|.||||.|+..|+.+++++|++    .|++++.++..|+||||+|+..++.+++++|+++|++.+.....+.++++.|.
T Consensus         2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a~   81 (228)
T d1k1aa_           2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC   81 (228)
T ss_dssp             TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhccccccccccccccccccccccccccccccccc
Confidence            48999999999999999998874    79999999999999999999999999999999999999999999999999999


Q ss_pred             HcCcHHHHHHHHhCCC----CCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCC-CCCCCCCCHHHHHHHcCCHHHHH
Q psy11819        471 KDGYYEIAVLLLNSGA----YINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVD-IPGKERKTAVYTAVEKGNVPILK  545 (651)
Q Consensus       471 ~~~~~~~~~~Ll~~g~----~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~g~t~l~~A~~~~~~~~v~  545 (651)
                      ..++.++++.+.....    ..+.......++++.+.........+.|.....+.. .....+.++++.|+..+...+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~  161 (228)
T d1k1aa_          82 EHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQ  161 (228)
T ss_dssp             HTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHH
T ss_pred             ccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhh
Confidence            9999999998876532    233445567899999999999999999998766543 45667899999999999999999


Q ss_pred             HHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHH
Q psy11819        546 LLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVE  611 (651)
Q Consensus       546 ~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~  611 (651)
                      ++++.|.+++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+++|+.++||
T Consensus       162 ~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         162 LLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             HHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred             hhhhhccccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCccccC
Confidence            999999999999999999999999999999999999999999999999999999999999998875

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.3e-30  Score=232.39  Aligned_cols=186  Identities=23%  Similarity=0.294  Sum_probs=167.2

Q ss_pred             CCCcHHHHHHHcCcH----HHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHH
Q psy11819        461 DGCTALTIACKDGYY----EIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAV  536 (651)
Q Consensus       461 ~g~t~l~~A~~~~~~----~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~  536 (651)
                      +|.||||+|+..|+.    ++++++...|++++.+|.+|+||||+|+..|+.+++++|+++|++++..+..|.|||+.|+
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~~   80 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC   80 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHH
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCcccCCCCCCcccccccccccccccccccccccccccccccccccccccc
Confidence            589999999999985    4566777889999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhcCCC------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHHcCChHH
Q psy11819        537 EKGNVPILKLLLTANPD------LEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVD-KRGDTVLHIAMRARSKTI  609 (651)
Q Consensus       537 ~~~~~~~v~~Ll~~~~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d-~~g~t~l~~A~~~~~~~~  609 (651)
                      ..++.++++.|+..+.+      .......|.||||.|+..++.+++++|+..|+.++..+ .+|.||||+|++.|+.++
T Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~  160 (221)
T d1iknd_          81 EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL  160 (221)
T ss_dssp             HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred             ccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHH
Confidence            99999999999998765      33445578999999999999999999999999988765 679999999999999999


Q ss_pred             HHHHHhCCCCcccccCCCCCCCCcccccccccchhhhhcc
Q psy11819        610 VEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQEC  649 (651)
Q Consensus       610 ~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~  649 (651)
                      +++|+++|++   ++.+|..|+||||+|.+.++.++++.+
T Consensus       161 v~~Ll~~gad---~~~~~~~G~tpl~~A~~~~~~~~~~~l  197 (221)
T d1iknd_         161 VSLLLKCGAD---VNRVTYQGYSPYQLTWGRPSTRIQQQL  197 (221)
T ss_dssp             HHHHHTTTCC---SCCCCTTCCCGGGGCTTSSCHHHHHHH
T ss_pred             HHHHHhcCCc---ccccCCCCCCHHHHHHHCCCHHHHHHH
Confidence            9999999988   788999999999999999999888765

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.96  E-value=1.6e-29  Score=225.47  Aligned_cols=205  Identities=25%  Similarity=0.312  Sum_probs=189.8

Q ss_pred             HHHHHHHHhcCCCCCC-CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCC-
Q psy11819        442 TEVVELLLEYKPNVNA-LDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYV-  519 (651)
Q Consensus       442 ~~~~~~Ll~~~~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~-  519 (651)
                      .++|++|+++|++++. .|.+|.||||+|+..|+.+++++|++.|++++..+..+.++++.++..++............ 
T Consensus         2 ~~~v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (209)
T d1ot8a_           2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRAT   81 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTC
T ss_pred             HHHHHHHHHCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhcccccccccccccccccccccccccccccccccccc
Confidence            4899999999999987 58899999999999999999999999999999999999999999999999988777776533 


Q ss_pred             CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHH
Q psy11819        520 DVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLH  599 (651)
Q Consensus       520 ~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~  599 (651)
                      ........+.++.+.+.........+.|.+.+++++.++..|+|||++|+.++..++++.+++.+++++..|..|.||||
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~  161 (209)
T d1ot8a_          82 NLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLF  161 (209)
T ss_dssp             CTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred             ccccccccccccccccccccchhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeeccccccccccccccccccc
Confidence            34445667889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccccccchhhhhcc
Q psy11819        600 IAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQKSILAQEC  649 (651)
Q Consensus       600 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~  649 (651)
                      +|+..|+.+++++|+++|++   ++.+|..|+||||+|++.++.++++.+
T Consensus       162 ~A~~~g~~~~v~~Ll~~gad---~n~~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         162 LAAREGSYEASKALLDNFAN---REITDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             HHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             hhccccHHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence            99999999999999999998   778999999999999999999988753

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1e-27  Score=202.20  Aligned_cols=153  Identities=24%  Similarity=0.323  Sum_probs=134.7

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHH
Q psy11819        464 TALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPI  543 (651)
Q Consensus       464 t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~  543 (651)
                      ++||.|+..|+.+++++|+++|++++.+|..|.||||+|+ .++.+++++|+++|++++..+..+.++++.++..++.+.
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~~   81 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDT   81 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCcCccCCcccccccccc-cccccccccccccccccccccccCccccccccccccccc
Confidence            6888888888888888888888888888888888888775 678888888888888888888888899999999999999


Q ss_pred             HHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCCcHHHHHHHcCChHHHHHHHhCC
Q psy11819        544 LKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKA-KITAVDKRGDTVLHIAMRARSKTIVEVFIRNP  617 (651)
Q Consensus       544 v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~  617 (651)
                      +++|+..+.+++..+..|.+||++|+..++.+++++|+++|+ +++.+|..|.||||+|++.++.+++++|+++|
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_          82 LQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG  156 (156)
T ss_dssp             HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            999998888888888889999999999999999999888876 78888888999999999999999999998876

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.4e-27  Score=198.14  Aligned_cols=151  Identities=21%  Similarity=0.289  Sum_probs=136.4

Q ss_pred             cHHHHHHHcCcHHHHHHHHhC-CCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHH
Q psy11819        464 TALTIACKDGYYEIAVLLLNS-GAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVP  542 (651)
Q Consensus       464 t~l~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~  542 (651)
                      +.|+.|+..|+.+++++|++. +++++..|..|.||||+|+ .++.+++++|++++.+++..+..|.+|++.++..++.+
T Consensus         4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~~   82 (156)
T d1bd8a_           4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLD   82 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence            358899999999999998875 7889999999999999886 47889999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhC
Q psy11819        543 ILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRN  616 (651)
Q Consensus       543 ~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~  616 (651)
                      ++++++++|++++.+|..|.||||+|+..|+.+++++|+ .|++++.+|..|+||||+|++.|+.+++++|+++
T Consensus        83 ~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_          83 TLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             ccccccccccccccccCCCCeeecccccccccccccccc-ccccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence            999999999999999999999999999999999999887 6889999999999999999999999999999875

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.3e-27  Score=197.26  Aligned_cols=153  Identities=26%  Similarity=0.291  Sum_probs=133.9

Q ss_pred             hHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHH
Q psy11819        431 TPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGI  510 (651)
Q Consensus       431 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~  510 (651)
                      ++||.|+..|+.+++++|+++|++++..|.+|.||||+|+ .|+.+++++|+++|++++..+..+.++++.++..++.+.
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~~   81 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDT   81 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCcCccCCcccccccccc-cccccccccccccccccccccccCccccccccccccccc
Confidence            6788888888888888888888888888888888888775 678888888888888888888888888888888888888


Q ss_pred             HHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCC-CccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q psy11819        511 VEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANP-DLEIATKDGDTPLLKAVKTRNLEAIQMLIDKK  584 (651)
Q Consensus       511 v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g  584 (651)
                      +++|++.+.+++..+..|.+++++|+..++.+++++|+++++ +++.+|..|+||||+|++.++.++|++|+++|
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_          82 LQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG  156 (156)
T ss_dssp             HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            888888888888888889999999999999999999988886 78888889999999999999999999998876

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=1.5e-26  Score=194.12  Aligned_cols=150  Identities=25%  Similarity=0.295  Sum_probs=135.7

Q ss_pred             CcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHH
Q psy11819        463 CTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVP  542 (651)
Q Consensus       463 ~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~  542 (651)
                      .|||+.|++.|+.+++++|+++|++++ .+..|.||||+|+..++.++++.++.........+..+.++++.++...+.+
T Consensus         3 ~t~L~~Aa~~g~~~~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (153)
T d1awcb_           3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN   81 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHcCCCcc-cccCCCccccccccccccccccccccccccccccccccccccccccccccce
Confidence            378999999999999999999998876 6888999999999999999999998887777777888889999999999999


Q ss_pred             HHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHH
Q psy11819        543 ILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVF  613 (651)
Q Consensus       543 ~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~L  613 (651)
                      ++++++..|++++.++.+|+||||+|+..|+.++|++|++.|++++.+|++|.||||+|+.+|+.+++++|
T Consensus        82 ~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_          82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             eeecccccCCccccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999876

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.3e-26  Score=190.82  Aligned_cols=151  Identities=28%  Similarity=0.347  Sum_probs=121.2

Q ss_pred             hHHHHHHhcCcHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHH
Q psy11819        431 TPLLVATLGNFTEVVELLLEY-KPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRG  509 (651)
Q Consensus       431 t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~  509 (651)
                      ..|+.|+..|+.++++.|++. +.+++..|..|.||||+|+. ++.+++++|++++.+++..+..|.+|++.++..++.+
T Consensus         4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~~-~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~~   82 (156)
T d1bd8a_           4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLD   82 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSCT-TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCcccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence            357777777777777777764 56777777788888887754 6778888888888888888888888888888888888


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy11819        510 IVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDK  583 (651)
Q Consensus       510 ~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  583 (651)
                      ++++++++|++++.++.+|.||||+|+..|+.+++++|+ .|++++.+|.+|+||||+|+..|+.+++++|+++
T Consensus        83 ~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_          83 TLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             ccccccccccccccccCCCCeeecccccccccccccccc-ccccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence            888888888888888888888888888888888888776 5788888888888888888888888888888764

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.94  E-value=7.4e-29  Score=237.07  Aligned_cols=233  Identities=17%  Similarity=0.159  Sum_probs=176.8

Q ss_pred             hHHHHHhhcCCCChHHHHHHHcCCHHHHHH---HHHcCCCCCCcCcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCC--
Q psy11819        385 LLFVLVMHLSYGTTPLVWACRKGHVEIVDI---LLKAGANVDVAGLYCWTPLLVATLGNFTEVVELLLEYKPNVNALD--  459 (651)
Q Consensus       385 ~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~---Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~--  459 (651)
                      ....+..++..|.|+|+.|+.+|+.+++++   |++.|++++..+..|+||||+|+..|+.+++++|+++|++++..+  
T Consensus        79 ~~~~~~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~  158 (346)
T d2ajaa1          79 LWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQ  158 (346)
T ss_dssp             HHHHHHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHS
T ss_pred             hhhHHHhccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccc
Confidence            344566778889999999999999887765   789999999999999999999999999999999999999987764  


Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHhCCCCCc---ccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCC-------CCCCC
Q psy11819        460 KDGCTALTIACKDGYYEIAVLLLNSGAYIN---IQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIP-------GKERK  529 (651)
Q Consensus       460 ~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~-------~~~g~  529 (651)
                      .+|.||||+|+..|+.+++++|++.|++..   ..+..+.||++.|+.+|+.+++++|+++|++++..       ...+.
T Consensus       159 ~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~  238 (346)
T d2ajaa1         159 AENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYV  238 (346)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTH
T ss_pred             cCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCcchHHHHHHHcCcHhh
Confidence            468999999999999999999999987653   33445678888899999999999999988665421       12223


Q ss_pred             CHHHHHHHcCCHHHHHHHHhcCCC--ccccCC-------CCCcHHHHHHHcCCHHHHHHHHHcCCC-----CcccCCCCC
Q psy11819        530 TAVYTAVEKGNVPILKLLLTANPD--LEIATK-------DGDTPLLKAVKTRNLEAIQMLIDKKAK-----ITAVDKRGD  595 (651)
Q Consensus       530 t~l~~A~~~~~~~~v~~Ll~~~~~--~~~~~~-------~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~d~~g~  595 (651)
                      ++++.+...+..++...+.....+  .+..+.       .+.++++.|+..+..+++++|++.++.     .+..+.+|+
T Consensus       239 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~  318 (346)
T d2ajaa1         239 NPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDAN  318 (346)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCC
T ss_pred             hHHHHHhhccchHHHHHHHHhcccccHhHHhcccccccchhhhHHHHHhcCChHHHHHHHHhCcChhhhcccccCCCCCC
Confidence            444444444444443333332222  222222       234788889999999999999987653     344456799


Q ss_pred             cHHHHHHHcCChHHHHHHHhCC
Q psy11819        596 TVLHIAMRARSKTIVEVFIRNP  617 (651)
Q Consensus       596 t~l~~A~~~~~~~~~~~Ll~~~  617 (651)
                      ||||+|++.|+.++|++|++.+
T Consensus       319 T~LhlA~~~Gn~e~v~lLL~~p  340 (346)
T d2ajaa1         319 ELLRLALRLGNQGACALLLSIP  340 (346)
T ss_dssp             HHHHHHHHHTCTTHHHHHTTSH
T ss_pred             cHHHHHHHcCcHHHHHHHhCCC
Confidence            9999999999999999999764

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=2.2e-25  Score=186.92  Aligned_cols=150  Identities=24%  Similarity=0.292  Sum_probs=135.7

Q ss_pred             ChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHH
Q psy11819        430 WTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRG  509 (651)
Q Consensus       430 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~  509 (651)
                      .|||+.|+..|+.+++++|+++|++++ .+..|.||||+|+..++.++++.++.........+..+.++++.++...+.+
T Consensus         3 ~t~L~~Aa~~g~~~~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (153)
T d1awcb_           3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN   81 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHcCCCcc-cccCCCccccccccccccccccccccccccccccccccccccccccccccce
Confidence            378888888888889988888888776 5788999999999999999999999888877777888889999999999999


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHH
Q psy11819        510 IVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQML  580 (651)
Q Consensus       510 ~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L  580 (651)
                      +++++..++.+++.++.+|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.+|+.+++++|
T Consensus        82 ~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_          82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             eeecccccCCccccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999876

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.93  E-value=3e-28  Score=232.84  Aligned_cols=130  Identities=17%  Similarity=0.167  Sum_probs=104.8

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHH---HHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCC--CCCchHH
Q psy11819        153 RDDNGGTALMFAAQKGKLSFVRE---LVTRGADVNAEDNDNWSPLTYAAREGYTDVCAELLDHGADLEHRD--MGGWSPL  227 (651)
Q Consensus       153 ~~~~~~t~l~~A~~~g~~~~v~~---Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~--~~~~t~L  227 (651)
                      ++..|.|||++||+.|+.+++++   |++.|++++..+..|+||||+|+..|+.++|++|++.|++++..+  .+|.|||
T Consensus        86 ~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L  165 (346)
T d2ajaa1          86 KGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAF  165 (346)
T ss_dssp             HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHH
T ss_pred             ccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccccCCCChh
Confidence            46678999999999999887766   788999999999999999999999999999999999999987765  4589999


Q ss_pred             HHHHHcCCHHHHHHHHhcCCCCCC---cCCCCCcHHHHHHhcChHHHHHHHHHcCCCC
Q psy11819        228 MWASYKGHTDTVALLLDKNADVNA---HGNYHISSLIWAAGRGYTEIVALLVKKGAKV  282 (651)
Q Consensus       228 ~~A~~~~~~~~v~~Ll~~~~~~~~---~~~~~~t~L~~a~~~~~~~~v~~L~~~~~~~  282 (651)
                      |+|+.+||.++|++|++.|++...   .+..+.++++.|+..|+.+++++|++.|+++
T Consensus       166 ~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~  223 (346)
T d2ajaa1         166 RLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVML  223 (346)
T ss_dssp             HHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHH
T ss_pred             HHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCc
Confidence            999999999999999998876532   2233456677777788888888888776543

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=1.7e-25  Score=176.28  Aligned_cols=110  Identities=22%  Similarity=0.235  Sum_probs=101.1

Q ss_pred             CCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChH
Q psy11819        529 KTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKT  608 (651)
Q Consensus       529 ~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~  608 (651)
                      .|||++|+++|+.++|++|+++|++++..+..|+||||+|+.+|+.+++++|+++|++++.+|..|+||||+|+.+++.+
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~~   82 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVS   82 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCCH
T ss_pred             ChHHHHHHHCCCHHHHHHHHHhhhccccccccccccccccccccccccccccccccceeeecccccccchhhhhhcCchh
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCcccccCCCCCCCCccccccccc
Q psy11819        609 IVEVFIRNPKNNILLYRPNKAGETPYSIDMNNQ  641 (651)
Q Consensus       609 ~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~~~~  641 (651)
                      ++++|+++|++   ++.+|..|+||||+|..+.
T Consensus        83 ~v~~Ll~~Gad---~~~~d~~G~t~l~~a~~~~  112 (118)
T d1myoa_          83 CVKLLLSKGAD---KTVKGPDGLTALEATDNQA  112 (118)
T ss_dssp             HHHHHHTTCCC---SSSSSSSTCCCCCTCSSTT
T ss_pred             hhhhhhccccc---ceeeCCCCCCHHHHHhHHH
Confidence            99999999988   7789999999999995543

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.3e-25  Score=177.76  Aligned_cols=119  Identities=18%  Similarity=0.223  Sum_probs=82.3

Q ss_pred             CcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCC-cHHHHHHHcCCH
Q psy11819        496 DSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGD-TPLLKAVKTRNL  574 (651)
Q Consensus       496 ~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~-t~L~~A~~~~~~  574 (651)
                      .++||.|+..|+.+++++|+++|++++.++..|.||+|.|+ .|+.+++++|+++|++++..+..+. ||||+|+++|+.
T Consensus         4 ~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~~   82 (125)
T d1bi7b_           4 ADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFL   82 (125)
T ss_dssp             TTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCH
T ss_pred             hhHHHHHHHCCCHHHHHHHHHcCCccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence            45666666666666666666666666666666777766553 5667777777777777776666654 477777777777


Q ss_pred             HHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHh
Q psy11819        575 EAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIR  615 (651)
Q Consensus       575 ~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~  615 (651)
                      ++|++|+++|++++.+|..|+||||+|+.+|+.+++++|+.
T Consensus        83 ~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          83 DTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             cccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            77777777777777777777777777777777777777653

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=6.6e-25  Score=175.04  Aligned_cols=120  Identities=21%  Similarity=0.196  Sum_probs=112.4

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCC-CHHHHHHHcCC
Q psy11819        462 GCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERK-TAVYTAVEKGN  540 (651)
Q Consensus       462 g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~-t~l~~A~~~~~  540 (651)
                      +.++||.|+..|+.+++++|+++|++++.++..|.||++.|+ .|+.+++++|+++|++++..+..+. +|||+|++.|+
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~   81 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF   81 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTC
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHcCCccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence            457999999999999999999999999999999999999775 6899999999999999999988876 69999999999


Q ss_pred             HHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy11819        541 VPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLID  582 (651)
Q Consensus       541 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  582 (651)
                      .+++++|+++|++++.+|..|+||||+|+++|+.+++++|++
T Consensus        82 ~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          82 LDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             ccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            999999999999999999999999999999999999999975

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=7.1e-26  Score=178.43  Aligned_cols=107  Identities=27%  Similarity=0.345  Sum_probs=97.4

Q ss_pred             CcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHH
Q psy11819        496 DSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLE  575 (651)
Q Consensus       496 ~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~  575 (651)
                      .|||++|++.|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.+|+.+
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~~   82 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVS   82 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCCH
T ss_pred             ChHHHHHHHCCCHHHHHHHHHhhhccccccccccccccccccccccccccccccccceeeecccccccchhhhhhcCchh
Confidence            47889999999999999999999999988999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCcccCCCCCcHHHHHH
Q psy11819        576 AIQMLIDKKAKITAVDKRGDTVLHIAM  602 (651)
Q Consensus       576 ~v~~Ll~~ga~~~~~d~~g~t~l~~A~  602 (651)
                      +|++|+++|++++.+|+.|.||||+|.
T Consensus        83 ~v~~Ll~~Gad~~~~d~~G~t~l~~a~  109 (118)
T d1myoa_          83 CVKLLLSKGADKTVKGPDGLTALEATD  109 (118)
T ss_dssp             HHHHHHTTCCCSSSSSSSTCCCCCTCS
T ss_pred             hhhhhhcccccceeeCCCCCCHHHHHh
Confidence            999999999999999999999999883

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.3e-24  Score=170.91  Aligned_cols=120  Identities=23%  Similarity=0.285  Sum_probs=90.9

Q ss_pred             cHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHH
Q psy11819        497 SNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEA  576 (651)
Q Consensus       497 t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~  576 (651)
                      ++|+.|+..|+.+++++|+++|++++.+|.+|+||||+|+..++.+++++|++.|++++..|.+|+||||+|+.+|+.++
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~   82 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQV   82 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCccccccccccccccccccccccccccccccccccccccccCcccccccchhhHHHH
Confidence            45677777777777777777777777777777778888888888888888888777777777788888888888888888


Q ss_pred             HHHHHHcCCCCcccCC-CCCcHHHHH--HHcCChHHHHHHHhC
Q psy11819        577 IQMLIDKKAKITAVDK-RGDTVLHIA--MRARSKTIVEVFIRN  616 (651)
Q Consensus       577 v~~Ll~~ga~~~~~d~-~g~t~l~~A--~~~~~~~~~~~Ll~~  616 (651)
                      |++|+++|++++..+. .+.||++++  ...|+.+++++|+..
T Consensus        83 v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~  125 (130)
T d1ycsb1          83 CKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  125 (130)
T ss_dssp             HHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             HHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence            8888888887776653 477776665  466677888877754

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=7.8e-24  Score=198.53  Aligned_cols=183  Identities=20%  Similarity=0.273  Sum_probs=126.8

Q ss_pred             HHhcCCCCCCC-CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcH-------HHHHHHHhcCC
Q psy11819        448 LLEYKPNVNAL-DKDGCTALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHR-------GIVEALLKKYV  519 (651)
Q Consensus       448 Ll~~~~~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~-------~~v~~Ll~~~~  519 (651)
                      +...+.+++.. |.+|.||||+|+..|+.+++++|+++|++++.+|..|.||||.|+..++.       ++++++..   
T Consensus        92 ~~~~~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~---  168 (301)
T d1sw6a_          92 FPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP---  168 (301)
T ss_dssp             CTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG---
T ss_pred             CCccCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhh---
Confidence            33456677765 88899999999999999999999999999999999999999999987653       34444433   


Q ss_pred             CCCCCCCCCCCHHHHHHHcCC----HH--------HHHHHHhcCCC-ccccCCCCCcHHHHHHHcCCHHHHH-----HHH
Q psy11819        520 DVDIPGKERKTAVYTAVEKGN----VP--------ILKLLLTANPD-LEIATKDGDTPLLKAVKTRNLEAIQ-----MLI  581 (651)
Q Consensus       520 ~~~~~~~~g~t~l~~A~~~~~----~~--------~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~-----~Ll  581 (651)
                      .+...|..|+||||+++..+.    ..        ++.+++..+.. .......+.++++.+........+.     .++
T Consensus       169 ~~~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (301)
T d1sw6a_         169 CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWII  248 (301)
T ss_dssp             GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHH
T ss_pred             hhhhcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHH
Confidence            355667888999998886443    22        34455555443 3344555666666665554433332     223


Q ss_pred             HcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCcccccCCCCCCCCcccccc
Q psy11819        582 DKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNNILLYRPNKAGETPYSIDM  638 (651)
Q Consensus       582 ~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~t~l~~a~  638 (651)
                      .  ..++.+|..|+||||+|+++|+.++|++|+++|++   ++++|+.|+||||+|+
T Consensus       249 ~--~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd---~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         249 A--NMLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD---PFIANKSGLRPVDFGA  300 (301)
T ss_dssp             H--HTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC---TTCCCTTSCCGGGGTC
T ss_pred             h--cCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHcC
Confidence            2  24778899999999999999999999999999999   7789999999999986

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=7.4e-23  Score=168.14  Aligned_cols=122  Identities=25%  Similarity=0.278  Sum_probs=99.4

Q ss_pred             HHHHHhcCcHHHHHHHHhcCCCCCC------CCCCCCCHHHHHHHc---CCHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q psy11819        499 LIHAVKGGHRGIVEALLKKYVDVDI------PGKERKTAVYTAVEK---GNVPILKLLLTANPDLEIATKDGDTPLLKAV  569 (651)
Q Consensus       499 l~~A~~~~~~~~v~~Ll~~~~~~~~------~~~~g~t~l~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~  569 (651)
                      |..|++.++...+..++..|.+++.      .+..|.||||+|+..   +..+++++|+++|++++.+|..|+||||+|+
T Consensus        10 L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~A~   89 (154)
T d1dcqa1          10 LCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCC   89 (154)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHH
T ss_pred             HHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhhhhhhhcccccccc
Confidence            3445566666666666665555443      256688999999864   6788999999999999999999999999999


Q ss_pred             HcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCc
Q psy11819        570 KTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAMRARSKTIVEVFIRNPKNN  620 (651)
Q Consensus       570 ~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~  620 (651)
                      ..|+.+++++|+++|++++.+|..|.||||+|++.|+.+++++|++.++..
T Consensus        90 ~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~~  140 (154)
T d1dcqa1          90 LTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR  140 (154)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred             ccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC
Confidence            999999999999999999999999999999999999999999999877654

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.4e-23  Score=165.47  Aligned_cols=121  Identities=21%  Similarity=0.222  Sum_probs=109.9

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHH
Q psy11819        464 TALTIACKDGYYEIAVLLLNSGAYINIQDRSGDSNLIHAVKGGHRGIVEALLKKYVDVDIPGKERKTAVYTAVEKGNVPI  543 (651)
Q Consensus       464 t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~  543 (651)
                      ++|+.|+..|+.+++++|+++|++++.+|.+|.||||+|+..++.+++++|++.|++++.+|.+|+||||+|+..|+.++
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~   82 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQV   82 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCccccccccccccccccccccccccccccccccccccccccCcccccccchhhHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCccccCC-CCCcHHHHH--HHcCCHHHHHHHHHcC
Q psy11819        544 LKLLLTANPDLEIATK-DGDTPLLKA--VKTRNLEAIQMLIDKK  584 (651)
Q Consensus       544 v~~Ll~~~~~~~~~~~-~g~t~L~~A--~~~~~~~~v~~Ll~~g  584 (651)
                      +++|+++|++++..+. .++||++++  +..|+.+++++|++.+
T Consensus        83 v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~~  126 (130)
T d1ycsb1          83 CKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQ  126 (130)
T ss_dssp             HHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHH
T ss_pred             HHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhHH
Confidence            9999999999997764 588887765  5778899999998753

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=1.5e-23  Score=196.64  Aligned_cols=181  Identities=20%  Similarity=0.167  Sum_probs=130.3

Q ss_pred             HcCCCCCCc-CcCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCc-------HHHHHHHHhCCCCC
Q psy11819        417 KAGANVDVA-GLYCWTPLLVATLGNFTEVVELLLEYKPNVNALDKDGCTALTIACKDGY-------YEIAVLLLNSGAYI  488 (651)
Q Consensus       417 ~~~~~~~~~-~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~-------~~~~~~Ll~~g~~~  488 (651)
                      ..+.++|.. |..|+||||+|+..++.+++++|+++|++++.+|..|.||||.|+..++       .++++++.+   .+
T Consensus        94 ~~~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~---~~  170 (301)
T d1sw6a_          94 NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP---CL  170 (301)
T ss_dssp             TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG---GG
T ss_pred             ccCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhh---hh
Confidence            356778765 8899999999999999999999999999999999999999999998765       245555543   45


Q ss_pred             cccCCCCCcHHHHHHhcCc----HH--------HHHHHHhcCC-CCCCCCCCCCCHHHHHHHcCCHHHH-----HHHHhc
Q psy11819        489 NIQDRSGDSNLIHAVKGGH----RG--------IVEALLKKYV-DVDIPGKERKTAVYTAVEKGNVPIL-----KLLLTA  550 (651)
Q Consensus       489 ~~~~~~~~t~l~~A~~~~~----~~--------~v~~Ll~~~~-~~~~~~~~g~t~l~~A~~~~~~~~v-----~~Ll~~  550 (651)
                      ...|..|+||||.++..+.    ..        ++++++..+. ........+.++++.+........+     .+++..
T Consensus       171 ~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (301)
T d1sw6a_         171 ILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIAN  250 (301)
T ss_dssp             GEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHH
T ss_pred             hhcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHHhc
Confidence            6778889999998876433    22        3445555433 2333344445555555444333322     233333


Q ss_pred             CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q psy11819        551 NPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAKITAVDKRGDTVLHIAM  602 (651)
Q Consensus       551 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~  602 (651)
                        .+|.+|.+|+||||+|+++|+.++|++|++.||+++.+|+.|.|||+||+
T Consensus       251 --~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         251 --MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             --TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             --CccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHcC
Confidence              37889999999999999999999999999999999999999999999985

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=1.6e-21  Score=160.04  Aligned_cols=122  Identities=23%  Similarity=0.239  Sum_probs=104.1

Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCCCccc------CCCCCcHHHHHHhc---CcHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Q psy11819        465 ALTIACKDGYYEIAVLLLNSGAYINIQ------DRSGDSNLIHAVKG---GHRGIVEALLKKYVDVDIPGKERKTAVYTA  535 (651)
Q Consensus       465 ~l~~A~~~~~~~~~~~Ll~~g~~~~~~------~~~~~t~l~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~g~t~l~~A  535 (651)
                      .|..|++.+++..+..++..|.+++..      +..|.||||+|+..   ++.+++++|+++|++++.+|.+|.||||+|
T Consensus         9 ~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~A   88 (154)
T d1dcqa1           9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYC   88 (154)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHH
T ss_pred             HHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhhhhhhhccccccc
Confidence            345677777777777777777766544      56788999999874   678899999999999999999999999999


Q ss_pred             HHcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy11819        536 VEKGNVPILKLLLTANPDLEIATKDGDTPLLKAVKTRNLEAIQMLIDKKAK  586 (651)
Q Consensus       536 ~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  586 (651)
                      +..|+.+++++|+++|++++.+|..|+||||+|++.|+.+++++|++.++.
T Consensus        89 ~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~  139 (154)
T d1dcqa1          89 CLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG  139 (154)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             cccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence            999999999999999999999999999999999999999999999987654