Psyllid ID: psy11820

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
Protein Sequence
MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE
Secondary Structure (PSIPRED)
cccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccEEcccccccEEEcccccccccEEEEEccccccccccEEEEEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccEccccccccEEEEcccccccEEEEEEcccccccccccccEEEEcHHHccHHHHccc
Coil and Loop (DISEMBL)
MLEQNLYDFlkqnkfsplplkyirPILHQVLTALLKLKQLGlihadlkpenimlvdpvrqpyrvkvidfgsashVSKAVCNTYLqsryyrapeiilge
Flexible Loop (DISEMBL)
MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIdfgsashvskaVCNTylqsryyrapeiilge
Low Complexity Region (SEG)
MLEQNLYDFLKQNKFSPLPLKYIRPILHQVltallklkqlglIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE
Disordered region (IsUnstruct)
*****LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL**
Disordered Region (DISOPRED)
MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE
Disordered Region (DISEMBL)
MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE
Disordered Region (DISPRO)
MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	98	2.2.26 [Sep-21-2011]
Q86Z02	1210	Homeodomain-interacting p	yes	N/A	0.989	0.080	0.948	2e-49
A4L9P5	1211	Homeodomain-interacting p	yes	N/A	0.989	0.080	0.948	2e-49
O88904	1210	Homeodomain-interacting p	yes	N/A	0.989	0.080	0.948	2e-49
Q9H422	1215	Homeodomain-interacting p	no	N/A	0.989	0.079	0.927	2e-47
Q9WUM7	1168	Homeodomain-interacting p	N/A	N/A	0.989	0.083	0.927	2e-47
Q9QZR5	1196	Homeodomain-interacting p	no	N/A	0.989	0.081	0.927	2e-47
Q9H2X6	1198	Homeodomain-interacting p	no	N/A	0.989	0.080	0.927	2e-47
O88850	1191	Homeodomain-interacting p	no	N/A	0.989	0.081	0.917	6e-47
Q9ERH7	1192	Homeodomain-interacting p	no	N/A	0.989	0.081	0.917	6e-47
Q8NE63	616	Homeodomain-interacting p	no	N/A	0.989	0.157	0.646	2e-30

>sp|Q86Z02|HIPK1_HUMAN Homeodomain-interacting protein kinase 1 OS=Homo sapiens GN=HIPK1 PE=1 SV=1

 Score =  194 bits (492), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 92/97 (94%), Positives = 94/97 (96%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           MLEQNLYDFLKQNKFSPLPLKYIRPIL QV TAL+KLK LGLIHADLKPENIMLVDPVRQ
Sbjct: 270 MLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPVRQ 329

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           PYRVKVIDFGSASHVSKAVC+TYLQSRYYRAPEIILG
Sbjct: 330 PYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILG 366

Serine/threonine-protein kinase involved in transcription regulation and TNF-mediated cellular apoptosis. Plays a role as a corepressor for homeodomain transcription factors. Phosphorylates DAXX and MYB. Phosphorylates DAXX in response to stress, and mediates its translocation from the nucleus to the cytoplasm. Inactivates MYB transcription factor activity by phosphorylation. Prevents MAP3K5-JNK activation in the absence of TNF. TNF triggers its translocation to the cytoplasm in response to stress stimuli, thus activating nuclear MAP3K5-JNK by derepression and promoting apoptosis. May be involved in anti-oxidative stress responses. Involved in the regulation of eye size, lens formation and retinal lamination during late embryogenesis. Promotes angiogenesis and to be involved in erythroid differentiation. May be involved in malignant squamous cell tumor formation.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|A4L9P5|HIPK1_RAT Homeodomain-interacting protein kinase 1 OS=Rattus norvegicus GN=Hipk1 PE=2 SV=1

 Score =  194 bits (492), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 92/97 (94%), Positives = 94/97 (96%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           MLEQNLYDFLKQNKFSPLPLKYIRPIL QV TAL+KLK LGLIHADLKPENIMLVDPVRQ
Sbjct: 270 MLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPVRQ 329

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           PYRVKVIDFGSASHVSKAVC+TYLQSRYYRAPEIILG
Sbjct: 330 PYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILG 366

Serine/threonine-protein kinase involved in transcription regulation and TNF-mediated cellular apoptosis. Plays a role as a corepressor for homeodomain transcription factors. Phosphorylates DAXX and MYB. Phosphorylates DAXX in response to stress, and mediates its translocation from the nucleus to the cytoplasm. Inactivates MYB transcription factor activity by phosphorylation. Prevents MAP3K5-JNK activation in the absence of TNF. TNF triggers its translocation to the cytoplasm in response to stress stimuli, thus activating nuclear MAP3K5-JNK by derepression and promoting apoptosis. May be involved in anti-oxidative stress responses. Involved in the regulation of eye size, lens formation and retinal lamination during late embryogenesis. Promotes angiogenesis and to be involved in erythroid differentiation. May be involved in malignant squamous cell tumor formation.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O88904|HIPK1_MOUSE Homeodomain-interacting protein kinase 1 OS=Mus musculus GN=Hipk1 PE=1 SV=2

 Score =  194 bits (492), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 92/97 (94%), Positives = 94/97 (96%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           MLEQNLYDFLKQNKFSPLPLKYIRPIL QV TAL+KLK LGLIHADLKPENIMLVDPVRQ
Sbjct: 270 MLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPVRQ 329

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           PYRVKVIDFGSASHVSKAVC+TYLQSRYYRAPEIILG
Sbjct: 330 PYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILG 366

Serine/threonine-protein kinase involved in transcription regulation and TNF-mediated cellular apoptosis. Plays a role as a corepressor for homeodomain transcription factors. Phosphorylates DAXX and MYB. Phosphorylates DAXX in response to stress, and mediates its translocation from the nucleus to the cytoplasm. Inactivates MYB transcription factor activity by phosphorylation. Prevents MAP3K5-JNK activation in the absence of TNF. TNF triggers its translocation to the cytoplasm in response to stress stimuli, thus activating nuclear MAP3K5-JNK by derepression and promoting apoptosis. May be involved in anti-oxidative stress responses. Involved in the regulation of eye size, lens formation and retinal lamination during late embryogenesis. Promotes angiogenesis and to be involved in erythroid differentiation. May be involved in malignant squamous cell tumor formation.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9H422|HIPK3_HUMAN Homeodomain-interacting protein kinase 3 OS=Homo sapiens GN=HIPK3 PE=1 SV=1

 Score =  187 bits (474), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 90/97 (92%), Positives = 91/97 (93%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           MLEQNLYDFLKQNKFSPLPLK IRPIL QV TAL KLK LGLIHADLKPENIMLVDPVRQ
Sbjct: 277 MLEQNLYDFLKQNKFSPLPLKVIRPILQQVATALKKLKSLGLIHADLKPENIMLVDPVRQ 336

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           PYRVKVIDFGSASHVSK VC+TYLQSRYYRAPEIILG
Sbjct: 337 PYRVKVIDFGSASHVSKTVCSTYLQSRYYRAPEIILG 373

Serine/threonine-protein kinase involved in transcription regulation, apoptosis and steroidogenic gene expression. Phosphorylates JUN and RUNX2. Seems to negatively regulate apoptosis by promoting FADD phosphorylation. Enhances androgen receptor-mediated transcription. May act as a transcriptional corepressor for NK homeodomain transcription factors. The phosphorylation of NR5A1 activates SF1 leading to increased steroidogenic gene expression upon cAMP signaling pathway stimulation. In osteoblasts, supports transcription activation: phosphorylates RUNX2 that synergizes with SPEN/MINT to enhance FGFR2-mediated activation of the osteocalcin FGF-responsive element (OCFRE).

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9WUM7|HIPK2_MESAU Homeodomain-interacting protein kinase 2 OS=Mesocricetus auratus GN=Hipk2 PE=1 SV=2

 Score =  187 bits (474), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 90/97 (92%), Positives = 93/97 (95%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           MLEQNLYDFLKQNKFSPLPLKYIRP+L QV TAL+KLK LGLIHADLKPENIMLVDP RQ
Sbjct: 279 MLEQNLYDFLKQNKFSPLPLKYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDPSRQ 338

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           PYRVKVIDFGSASHVSKAVC+TYLQSRYYRAPEIILG
Sbjct: 339 PYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILG 375

Serine/threonine-protein kinase involved in transcription regulation, p53/TP53-mediated cellular apoptosis and regulation of the cell cycle. Acts as a corepressor of several transcription factors, including SMAD1 and POU4F1/Brn3a and probably NK homeodomain transcription factors. Phosphorylates PDX1, ATF1, PML, p53/TP53, CREB1, CTBP1, CBX4, RUNX1, EP300, CTNNB1, HMGA1 and ZBTB4. Inhibits cell growth and promotes apoptosis through the activation of p53/TP53 both at the transcription level and at the protein level (by phosphorylation and indirect acetylation). The phosphorylation of p53/TP53 may be mediated by a p53/TP53-HIPK2-AXIN1 complex. Involved in the response to hypoxia by acting as a transcriptional co-suppressor of HIF1A. Mediates transcriptional activation of TP73. In response to TGFB, cooperates with DAXX to activate JNK. Negative regulator through phosphorylation and subsequent proteasomal degradation of CTNNB1 and the antiapoptotic factor CTBP1. In the Wnt/beta-catenin signaling pathway acts as an intermediate kinase between MAP3K7/TAK1 and NLK to promote the proteasomal degradation of MYB. Phosphorylates CBX4 upon DNA damage and promotes its E3 SUMO-protein ligase activity. Activates CREB1 and ATF1 transcription factors by phosphorylation in response to genotoxic stress. In response to DNA damage, stabilizes PML by phosphorylation. PML, HIPK2 and FBXO3 may act synergically to activate p53/TP53-dependent transactivation. Promotes angiogenesis, and is involved in erythroid differentiation, especially during fetal liver erythropoiesis. Phosphorylation of RUNX1 and EP300 stimulates EP300 transcription regulation activity. Triggers ZBTB4 protein degradation in response to DNA damage. Modulates HMGA1 DNA-binding affinity. In response to high glucose, triggers phoyphorylation-mediated subnuclear localization shifting of PDX1. Involved in the regulation of eye size, lens formation and retinal lamination during late embryogenesis.

Mesocricetus auratus (taxid: 10036)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9QZR5|HIPK2_MOUSE Homeodomain-interacting protein kinase 2 OS=Mus musculus GN=Hipk2 PE=1 SV=2

 Score =  187 bits (474), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 90/97 (92%), Positives = 93/97 (95%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           MLEQNLYDFLKQNKFSPLPLKYIRP+L QV TAL+KLK LGLIHADLKPENIMLVDP RQ
Sbjct: 279 MLEQNLYDFLKQNKFSPLPLKYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDPSRQ 338

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           PYRVKVIDFGSASHVSKAVC+TYLQSRYYRAPEIILG
Sbjct: 339 PYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILG 375

Serine/threonine-protein kinase involved in transcription regulation, p53/TP53-mediated cellular apoptosis and regulation of the cell cycle. Acts as a corepressor of several transcription factors, including SMAD1 and POU4F1/Brn3a and probably NK homeodomain transcription factors. Phosphorylates PDX1, ATF1, PML, p53/TP53, CREB1, CTBP1, CBX4, RUNX1, EP300, CTNNB1, HMGA1 and ZBTB4. Inhibits cell growth and promotes apoptosis through the activation of p53/TP53 both at the transcription level and at the protein level (by phosphorylation and indirect acetylation). The phosphorylation of p53/TP53 may be mediated by a p53/TP53-HIPK2-AXIN1 complex. Involved in the response to hypoxia by acting as a transcriptional co-suppressor of HIF1A. Mediates transcriptional activation of TP73. In response to TGFB, cooperates with DAXX to activate JNK. Negative regulator through phosphorylation and subsequent proteasomal degradation of CTNNB1 and the antiapoptotic factor CTBP1. In the Wnt/beta-catenin signaling pathway acts as an intermediate kinase between MAP3K7/TAK1 and NLK to promote the proteasomal degradation of MYB. Phosphorylates CBX4 upon DNA damage and promotes its E3 SUMO-protein ligase activity. Activates CREB1 and ATF1 transcription factors by phosphorylation in response to genotoxic stress. In response to DNA damage, stabilizes PML by phosphorylation. PML, HIPK2 and FBXO3 may act synergically to activate p53/TP53-dependent transactivation. Promotes angiogenesis, and is involved in erythroid differentiation, especially during fetal liver erythropoiesis. Phosphorylation of RUNX1 and EP300 stimulates EP300 transcription regulation activity. Triggers ZBTB4 protein degradation in response to DNA damage. Modulates HMGA1 DNA-binding affinity. In response to high glucose, triggers phoyphorylation-mediated subnuclear localization shifting of PDX1. Involved in the regulation of eye size, lens formation and retinal lamination during late embryogenesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9H2X6|HIPK2_HUMAN Homeodomain-interacting protein kinase 2 OS=Homo sapiens GN=HIPK2 PE=1 SV=2

 Score =  187 bits (474), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 90/97 (92%), Positives = 93/97 (95%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           MLEQNLYDFLKQNKFSPLPLKYIRP+L QV TAL+KLK LGLIHADLKPENIMLVDP RQ
Sbjct: 279 MLEQNLYDFLKQNKFSPLPLKYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDPSRQ 338

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           PYRVKVIDFGSASHVSKAVC+TYLQSRYYRAPEIILG
Sbjct: 339 PYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILG 375

Serine/threonine-protein kinase involved in transcription regulation, p53/TP53-mediated cellular apoptosis and regulation of the cell cycle. Acts as a corepressor of several transcription factors, including SMAD1 and POU4F1/Brn3a and probably NK homeodomain transcription factors. Phosphorylates PDX1, ATF1, PML, p53/TP53, CREB1, CTBP1, CBX4, RUNX1, EP300, CTNNB1, HMGA1 and ZBTB4. Inhibits cell growth and promotes apoptosis through the activation of p53/TP53 both at the transcription level and at the protein level (by phosphorylation and indirect acetylation). The phosphorylation of p53/TP53 may be mediated by a p53/TP53-HIPK2-AXIN1 complex. Involved in the response to hypoxia by acting as a transcriptional co-suppressor of HIF1A. Mediates transcriptional activation of TP73. In response to TGFB, cooperates with DAXX to activate JNK. Negative regulator through phosphorylation and subsequent proteasomal degradation of CTNNB1 and the antiapoptotic factor CTBP1. In the Wnt/beta-catenin signaling pathway acts as an intermediate kinase between MAP3K7/TAK1 and NLK to promote the proteasomal degradation of MYB. Phosphorylates CBX4 upon DNA damage and promotes its E3 SUMO-protein ligase activity. Activates CREB1 and ATF1 transcription factors by phosphorylation in response to genotoxic stress. In response to DNA damage, stabilizes PML by phosphorylation. PML, HIPK2 and FBXO3 may act synergically to activate p53/TP53-dependent transactivation. Promotes angiogenesis, and is involved in erythroid differentiation, especially during fetal liver erythropoiesis. Phosphorylation of RUNX1 and EP300 stimulates EP300 transcription regulation activity. Triggers ZBTB4 protein degradation in response to DNA damage. Modulates HMGA1 DNA-binding affinity. In response to high glucose, triggers phoyphorylation-mediated subnuclear localization shifting of PDX1. Involved in the regulation of eye size, lens formation and retinal lamination during late embryogenesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O88850|HIPK3_RAT Homeodomain-interacting protein kinase 3 OS=Rattus norvegicus GN=Hipk3 PE=1 SV=1

 Score =  185 bits (470), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 89/97 (91%), Positives = 91/97 (93%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           MLEQNLYDFLKQNKFSPLPLK IRP+L QV TAL KLK LGLIHADLKPENIMLVDPVRQ
Sbjct: 277 MLEQNLYDFLKQNKFSPLPLKVIRPVLQQVATALKKLKSLGLIHADLKPENIMLVDPVRQ 336

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           PYRVKVIDFGSASHVSK VC+TYLQSRYYRAPEIILG
Sbjct: 337 PYRVKVIDFGSASHVSKTVCSTYLQSRYYRAPEIILG 373

Seems to negatively regulate apoptosis by promoting FADD phosphorylation. Enhances androgen receptor-mediated transcription. May act as a transcriptional corepressor for NK homeodomain transcription factors.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ERH7|HIPK3_MOUSE Homeodomain-interacting protein kinase 3 OS=Mus musculus GN=Hipk3 PE=1 SV=3

 Score =  185 bits (470), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 89/97 (91%), Positives = 91/97 (93%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           MLEQNLYDFLKQNKFSPLPLK IRP+L QV TAL KLK LGLIHADLKPENIMLVDPVRQ
Sbjct: 277 MLEQNLYDFLKQNKFSPLPLKVIRPVLQQVATALKKLKSLGLIHADLKPENIMLVDPVRQ 336

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           PYRVKVIDFGSASHVSK VC+TYLQSRYYRAPEIILG
Sbjct: 337 PYRVKVIDFGSASHVSKTVCSTYLQSRYYRAPEIILG 373

Serine/threonine-protein kinase involved in transcription regulation, apoptosis and steroidogenic gene expression. Phosphorylates JUN and RUNX2. Seems to negatively regulate apoptosis by promoting FADD phosphorylation. Enhances androgen receptor-mediated transcription. May act as a transcriptional corepressor for NK homeodomain transcription factors. The phosphorylation of NR5A1 activates SF1 leading to increased steroidogenic gene expression upon cAMP signaling pathway stimulation. In osteoblasts, supports transcription activation: phosphorylates RUNX2 that synergizes with SPEN/MINT to enhance FGFR2-mediated activation of the osteocalcin FGF-responsive element (OCFRE).

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8NE63|HIPK4_HUMAN Homeodomain-interacting protein kinase 4 OS=Homo sapiens GN=HIPK4 PE=2 SV=1

 Score =  130 bits (327), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 64/99 (64%), Positives = 80/99 (80%), Gaps = 2/99 (2%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           +LEQNL++F K+N F+PLP ++IR +  QVLTAL +LK+L +IHADLKPENIMLVD  R 
Sbjct: 91  LLEQNLFEFQKENNFAPLPARHIRTVTLQVLTALARLKELAIIHADLKPENIMLVDQTRC 150

Query: 61  PYRVKVIDFGSASHVSKA--VCNTYLQSRYYRAPEIILG 97
           P+RVKVIDFGSAS  S+   V   Y+QSR+YRAPEI+LG
Sbjct: 151 PFRVKVIDFGSASIFSEVRYVKEPYIQSRFYRAPEILLG 189

Protein kinase that phosphorylates human TP53 at Ser-9, and thus induces TP53 repression of BIRC5 promoter (By similarity). May act as a corepressor of transcription factors.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	98
270005401	1192	hypothetical protein TcasGA2_TC007452 [T	0.989	0.081	0.989	2e-49
91080885	1210	PREDICTED: similar to GA14321-PA [Tribol	0.989	0.080	0.989	2e-49
195167699	959	GL22497 [Drosophila persimilis] gi|19410	0.989	0.101	0.979	4e-49
332016418	1315	Homeodomain-interacting protein kinase 2	0.989	0.073	0.979	6e-49
322787292	1243	hypothetical protein SINV_14230 [Solenop	0.989	0.078	0.979	6e-49
242003285	1364	hipk, putative [Pediculus humanus corpor	0.989	0.071	0.979	8e-49
195014709	1480	GH16233 [Drosophila grimshawi] gi|193897	0.989	0.065	0.979	8e-49
24654777	1340	homeodomain interacting protein kinase,	0.989	0.072	0.979	8e-49
195428835	1297	GK16639 [Drosophila willistoni] gi|19415	0.989	0.074	0.979	1e-48
442629226	1256	homeodomain interacting protein kinase,	0.989	0.077	0.979	1e-48

>gi|270005401|gb|EFA01849.1| hypothetical protein TcasGA2_TC007452 [Tribolium castaneum]

 Score =  199 bits (506), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 96/97 (98%), Positives = 96/97 (98%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           MLEQNLYDFLKQNKFSPLPLKYIRPIL QVLTALLKLKQLGLIHADLKPENIMLVDPVRQ
Sbjct: 248 MLEQNLYDFLKQNKFSPLPLKYIRPILQQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 307

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG
Sbjct: 308 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 344

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91080885|ref|XP_972748.1| PREDICTED: similar to GA14321-PA [Tribolium castaneum]

 Score =  199 bits (506), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 96/97 (98%), Positives = 96/97 (98%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           MLEQNLYDFLKQNKFSPLPLKYIRPIL QVLTALLKLKQLGLIHADLKPENIMLVDPVRQ
Sbjct: 266 MLEQNLYDFLKQNKFSPLPLKYIRPILQQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 325

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG
Sbjct: 326 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 362

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195167699|ref|XP_002024670.1| GL22497 [Drosophila persimilis] gi|194108075|gb|EDW30118.1| GL22497 [Drosophila persimilis]

 Score =  198 bits (503), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 95/97 (97%), Positives = 95/97 (97%)

Query: 1  MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
          MLEQNLYDFLKQNKFSPLPLKYIRPIL QVLTALLKLKQLGLIHADLKPENIMLVDPVRQ
Sbjct: 1  MLEQNLYDFLKQNKFSPLPLKYIRPILEQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60

Query: 61 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
          PYRVKVIDFGSASHVSK VCNTYLQSRYYRAPEIILG
Sbjct: 61 PYRVKVIDFGSASHVSKTVCNTYLQSRYYRAPEIILG 97

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332016418|gb|EGI57331.1| Homeodomain-interacting protein kinase 2 [Acromyrmex echinatior]

 Score =  197 bits (501), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 95/97 (97%), Positives = 96/97 (98%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           MLEQNLYDFLKQNKFSPLPLKYIRPIL QVLTALLKLKQLGLIHADLKPENIMLVDP+RQ
Sbjct: 289 MLEQNLYDFLKQNKFSPLPLKYIRPILQQVLTALLKLKQLGLIHADLKPENIMLVDPMRQ 348

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG
Sbjct: 349 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 385

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322787292|gb|EFZ13428.1| hypothetical protein SINV_14230 [Solenopsis invicta]

 Score =  197 bits (501), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 95/97 (97%), Positives = 96/97 (98%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           MLEQNLYDFLKQNKFSPLPLKYIRPIL QVLTALLKLKQLGLIHADLKPENIMLVDP+RQ
Sbjct: 285 MLEQNLYDFLKQNKFSPLPLKYIRPILQQVLTALLKLKQLGLIHADLKPENIMLVDPMRQ 344

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG
Sbjct: 345 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 381

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242003285|ref|XP_002422680.1| hipk, putative [Pediculus humanus corporis] gi|212505502|gb|EEB09942.1| hipk, putative [Pediculus humanus corporis]

 Score =  197 bits (500), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 95/97 (97%), Positives = 95/97 (97%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           MLEQNLYDFLKQNKFSPLPLKYIRPIL QVLTALLKLKQLGLIHADLKPENIMLVDP RQ
Sbjct: 346 MLEQNLYDFLKQNKFSPLPLKYIRPILQQVLTALLKLKQLGLIHADLKPENIMLVDPTRQ 405

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG
Sbjct: 406 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 442

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195014709|ref|XP_001984066.1| GH16233 [Drosophila grimshawi] gi|193897548|gb|EDV96414.1| GH16233 [Drosophila grimshawi]

 Score =  197 bits (500), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 95/97 (97%), Positives = 95/97 (97%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           MLEQNLYDFLKQNKFSPLPLKYIRPIL QVLTALLKLKQLGLIHADLKPENIMLVDPVRQ
Sbjct: 326 MLEQNLYDFLKQNKFSPLPLKYIRPILEQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 385

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           PYRVKVIDFGSASHVSK VCNTYLQSRYYRAPEIILG
Sbjct: 386 PYRVKVIDFGSASHVSKTVCNTYLQSRYYRAPEIILG 422

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24654777|ref|NP_612038.2| homeodomain interacting protein kinase, isoform A [Drosophila melanogaster] gi|24654780|ref|NP_728531.1| homeodomain interacting protein kinase, isoform B [Drosophila melanogaster] gi|23092707|gb|AAF47392.2| homeodomain interacting protein kinase, isoform A [Drosophila melanogaster] gi|23092708|gb|AAN11444.1| homeodomain interacting protein kinase, isoform B [Drosophila melanogaster]

 Score =  197 bits (500), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 95/97 (97%), Positives = 95/97 (97%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           MLEQNLYDFLKQNKFSPLPLKYIRPIL QVLTALLKLKQLGLIHADLKPENIMLVDPVRQ
Sbjct: 272 MLEQNLYDFLKQNKFSPLPLKYIRPILEQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 331

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           PYRVKVIDFGSASHVSK VCNTYLQSRYYRAPEIILG
Sbjct: 332 PYRVKVIDFGSASHVSKTVCNTYLQSRYYRAPEIILG 368

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195428835|ref|XP_002062471.1| GK16639 [Drosophila willistoni] gi|194158556|gb|EDW73457.1| GK16639 [Drosophila willistoni]

 Score =  197 bits (500), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 95/97 (97%), Positives = 95/97 (97%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           MLEQNLYDFLKQNKFSPLPLKYIRPIL QVLTALLKLKQLGLIHADLKPENIMLVDPVRQ
Sbjct: 180 MLEQNLYDFLKQNKFSPLPLKYIRPILEQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 239

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           PYRVKVIDFGSASHVSK VCNTYLQSRYYRAPEIILG
Sbjct: 240 PYRVKVIDFGSASHVSKTVCNTYLQSRYYRAPEIILG 276

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442629226|ref|NP_001261215.1| homeodomain interacting protein kinase, isoform C [Drosophila melanogaster] gi|440215079|gb|AGB93910.1| homeodomain interacting protein kinase, isoform C [Drosophila melanogaster]

 Score =  197 bits (500), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 95/97 (97%), Positives = 95/97 (97%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           MLEQNLYDFLKQNKFSPLPLKYIRPIL QVLTALLKLKQLGLIHADLKPENIMLVDPVRQ
Sbjct: 188 MLEQNLYDFLKQNKFSPLPLKYIRPILEQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 247

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           PYRVKVIDFGSASHVSK VCNTYLQSRYYRAPEIILG
Sbjct: 248 PYRVKVIDFGSASHVSKTVCNTYLQSRYYRAPEIILG 284

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	98
UNIPROTKB|D4ABW4	718	Hipk1 "Homeodomain-interacting	0.989	0.135	0.855	4.8e-39
UNIPROTKB|Q5SQL3	1165	HIPK1 "Homeodomain-interacting	0.989	0.083	0.855	2e-38
UNIPROTKB|D4ABW8	1166	Hipk1 "Homeodomain-interacting	0.989	0.083	0.855	2e-38
UNIPROTKB|J9NSA9	1169	HIPK1 "Uncharacterized protein	0.989	0.082	0.855	2e-38
UNIPROTKB|J3KP92	1176	HIPK1 "Homeodomain-interacting	0.989	0.082	0.855	2e-38
UNIPROTKB|E1BQ34	1210	HIPK1 "Uncharacterized protein	0.989	0.080	0.855	2.1e-38
UNIPROTKB|Q86Z02	1210	HIPK1 "Homeodomain-interacting	0.989	0.080	0.855	2.1e-38
MGI|MGI:1314873	1210	Hipk1 "homeodomain interacting	0.989	0.080	0.855	2.1e-38
RGD|1304941	1211	Hipk1 "homeodomain interacting	0.989	0.080	0.855	2.1e-38
UNIPROTKB|F1M8I6	1211	Hipk1 "Homeodomain-interacting	0.989	0.080	0.855	2.1e-38

UNIPROTKB|D4ABW4 Hipk1 "Homeodomain-interacting protein kinase 1" [Rattus norvegicus (taxid:10116)]

 Score = 423 (154.0 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 83/97 (85%), Positives = 84/97 (86%)

Query:     1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
             MLEQNLYDFLKQNKFSPLPLKYIRPIL QV            IHADLKPENIMLVDPVRQ
Sbjct:   270 MLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPVRQ 329

Query:    61 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
             PYRVKVIDFGSASHVSKAVC+TYLQSRYYRAPEIILG
Sbjct:   330 PYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILG 366

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q5SQL3 HIPK1 "Homeodomain-interacting protein kinase 1" [Homo sapiens (taxid:9606)]

 Score = 423 (154.0 bits), Expect = 2.0e-38, P = 2.0e-38
 Identities = 83/97 (85%), Positives = 84/97 (86%)

Query:     1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
             MLEQNLYDFLKQNKFSPLPLKYIRPIL QV            IHADLKPENIMLVDPVRQ
Sbjct:   270 MLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPVRQ 329

Query:    61 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
             PYRVKVIDFGSASHVSKAVC+TYLQSRYYRAPEIILG
Sbjct:   330 PYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILG 366

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|D4ABW8 Hipk1 "Homeodomain-interacting protein kinase 1" [Rattus norvegicus (taxid:10116)]

 Score = 423 (154.0 bits), Expect = 2.0e-38, P = 2.0e-38
 Identities = 83/97 (85%), Positives = 84/97 (86%)

Query:     1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
             MLEQNLYDFLKQNKFSPLPLKYIRPIL QV            IHADLKPENIMLVDPVRQ
Sbjct:   270 MLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPVRQ 329

Query:    61 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
             PYRVKVIDFGSASHVSKAVC+TYLQSRYYRAPEIILG
Sbjct:   330 PYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILG 366

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|J9NSA9 HIPK1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 423 (154.0 bits), Expect = 2.0e-38, P = 2.0e-38
 Identities = 83/97 (85%), Positives = 84/97 (86%)

Query:     1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
             MLEQNLYDFLKQNKFSPLPLKYIRPIL QV            IHADLKPENIMLVDPVRQ
Sbjct:   270 MLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPVRQ 329

Query:    61 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
             PYRVKVIDFGSASHVSKAVC+TYLQSRYYRAPEIILG
Sbjct:   330 PYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILG 366

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|J3KP92 HIPK1 "Homeodomain-interacting protein kinase 1" [Homo sapiens (taxid:9606)]

 Score = 423 (154.0 bits), Expect = 2.0e-38, P = 2.0e-38
 Identities = 83/97 (85%), Positives = 84/97 (86%)

Query:     1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
             MLEQNLYDFLKQNKFSPLPLKYIRPIL QV            IHADLKPENIMLVDPVRQ
Sbjct:   270 MLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPVRQ 329

Query:    61 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
             PYRVKVIDFGSASHVSKAVC+TYLQSRYYRAPEIILG
Sbjct:   330 PYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILG 366

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E1BQ34 HIPK1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 423 (154.0 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 83/97 (85%), Positives = 84/97 (86%)

Query:     1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
             MLEQNLYDFLKQNKFSPLPLKYIRPIL QV            IHADLKPENIMLVDPVRQ
Sbjct:   270 MLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPVRQ 329

Query:    61 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
             PYRVKVIDFGSASHVSKAVC+TYLQSRYYRAPEIILG
Sbjct:   330 PYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILG 366

GO:0061072 "iris morphogenesis" evidence=IEA

GO:0060235 "lens induction in camera-type eye" evidence=IEA

GO:0060059 "embryonic retina morphogenesis in camera-type eye" evidence=IEA

GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IEA

GO:0042771 "intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator" evidence=IEA

GO:0030182 "neuron differentiation" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0016605 "PML body" evidence=IEA

GO:0010842 "retina layer formation" evidence=IEA

GO:0010803 "regulation of tumor necrosis factor-mediated signaling pathway" evidence=IEA

GO:0009952 "anterior/posterior pattern specification" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0007224 "smoothened signaling pathway" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|Q86Z02 HIPK1 "Homeodomain-interacting protein kinase 1" [Homo sapiens (taxid:9606)]

 Score = 423 (154.0 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 83/97 (85%), Positives = 84/97 (86%)

Query:     1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
             MLEQNLYDFLKQNKFSPLPLKYIRPIL QV            IHADLKPENIMLVDPVRQ
Sbjct:   270 MLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPVRQ 329

Query:    61 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
             PYRVKVIDFGSASHVSKAVC+TYLQSRYYRAPEIILG
Sbjct:   330 PYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILG 366

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007224 "smoothened signaling pathway" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0009952 "anterior/posterior pattern specification" evidence=IEA

GO:0010842 "retina layer formation" evidence=IEA

GO:0016605 "PML body" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0030182 "neuron differentiation" evidence=IEA

GO:0042771 "intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator" evidence=IEA

GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IEA

GO:0060059 "embryonic retina morphogenesis in camera-type eye" evidence=IEA

GO:0060235 "lens induction in camera-type eye" evidence=IEA

GO:0061072 "iris morphogenesis" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006915 "apoptotic process" evidence=IDA

GO:0010803 "regulation of tumor necrosis factor-mediated signaling pathway" evidence=IDA

GO:0001654 "eye development" evidence=ISS

GO:0060216 "definitive hemopoiesis" evidence=ISS

GO:0045766 "positive regulation of angiogenesis" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

MGI|MGI:1314873 Hipk1 "homeodomain interacting protein kinase 1" [Mus musculus (taxid:10090)]

 Score = 423 (154.0 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 83/97 (85%), Positives = 84/97 (86%)

Query:     1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
             MLEQNLYDFLKQNKFSPLPLKYIRPIL QV            IHADLKPENIMLVDPVRQ
Sbjct:   270 MLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPVRQ 329

Query:    61 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
             PYRVKVIDFGSASHVSKAVC+TYLQSRYYRAPEIILG
Sbjct:   330 PYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILG 366

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003677 "DNA binding" evidence=ISS

GO:0003714 "transcription corepressor activity" evidence=ISS

GO:0004672 "protein kinase activity" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0006915 "apoptotic process" evidence=ISO

GO:0007224 "smoothened signaling pathway" evidence=IGI

GO:0008284 "positive regulation of cell proliferation" evidence=IGI

GO:0009952 "anterior/posterior pattern specification" evidence=IGI

GO:0010803 "regulation of tumor necrosis factor-mediated signaling pathway" evidence=ISO

GO:0010842 "retina layer formation" evidence=IMP

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016605 "PML body" evidence=IDA

GO:0016607 "nuclear speck" evidence=IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030182 "neuron differentiation" evidence=IMP

GO:0042771 "intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator" evidence=IGI

GO:0042802 "identical protein binding" evidence=IPI

GO:0043388 "positive regulation of DNA binding" evidence=ISS

GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IMP

GO:0060059 "embryonic retina morphogenesis in camera-type eye" evidence=IMP

GO:0060235 "lens induction in camera-type eye" evidence=IMP

GO:0061072 "iris morphogenesis" evidence=IMP

RGD|1304941 Hipk1 "homeodomain interacting protein kinase 1" [Rattus norvegicus (taxid:10116)]

 Score = 423 (154.0 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 83/97 (85%), Positives = 84/97 (86%)

Query:     1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
             MLEQNLYDFLKQNKFSPLPLKYIRPIL QV            IHADLKPENIMLVDPVRQ
Sbjct:   270 MLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPVRQ 329

Query:    61 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
             PYRVKVIDFGSASHVSKAVC+TYLQSRYYRAPEIILG
Sbjct:   330 PYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILG 366

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006915 "apoptotic process" evidence=ISO

GO:0007224 "smoothened signaling pathway" evidence=ISO

GO:0008284 "positive regulation of cell proliferation" evidence=ISO

GO:0009952 "anterior/posterior pattern specification" evidence=ISO

GO:0010803 "regulation of tumor necrosis factor-mediated signaling pathway" evidence=ISO

GO:0010842 "retina layer formation" evidence=ISO

GO:0016605 "PML body" evidence=ISO

GO:0016607 "nuclear speck" evidence=ISO

GO:0030182 "neuron differentiation" evidence=ISO

GO:0042771 "intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator" evidence=ISO

GO:0042802 "identical protein binding" evidence=ISO

GO:0048596 "embryonic camera-type eye morphogenesis" evidence=ISO

GO:0060059 "embryonic retina morphogenesis in camera-type eye" evidence=ISO

GO:0060235 "lens induction in camera-type eye" evidence=ISO

GO:0061072 "iris morphogenesis" evidence=ISO

UNIPROTKB|F1M8I6 Hipk1 "Homeodomain-interacting protein kinase 1" [Rattus norvegicus (taxid:10116)]

 Score = 423 (154.0 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 83/97 (85%), Positives = 84/97 (86%)

Query:     1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
             MLEQNLYDFLKQNKFSPLPLKYIRPIL QV            IHADLKPENIMLVDPVRQ
Sbjct:   270 MLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPVRQ 329

Query:    61 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
             PYRVKVIDFGSASHVSKAVC+TYLQSRYYRAPEIILG
Sbjct:   330 PYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILG 366

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9H422	HIPK3_HUMAN	2, ., 7, ., 1, 1, ., 1	0.9278	0.9897	0.0798	no	N/A
Q9QZR5	HIPK2_MOUSE	2, ., 7, ., 1, 1, ., 1	0.9278	0.9897	0.0811	no	N/A
O88904	HIPK1_MOUSE	2, ., 7, ., 1, 1, ., 1	0.9484	0.9897	0.0801	yes	N/A
A4L9P5	HIPK1_RAT	2, ., 7, ., 1, 1, ., 1	0.9484	0.9897	0.0800	yes	N/A
Q8SQZ4	YAK1_ENCCU	2, ., 7, ., 1, 2, ., 1	0.5051	0.9591	0.2320	yes	N/A
O88850	HIPK3_RAT	2, ., 7, ., 1, 1, ., 1	0.9175	0.9897	0.0814	no	N/A
Q9H2X6	HIPK2_HUMAN	2, ., 7, ., 1, 1, ., 1	0.9278	0.9897	0.0809	no	N/A
Q9ERH7	HIPK3_MOUSE	2, ., 7, ., 1, 1, ., 1	0.9175	0.9897	0.0813	no	N/A
Q86Z02	HIPK1_HUMAN	2, ., 7, ., 1, 1, ., 1	0.9484	0.9897	0.0801	yes	N/A
P14680	YAK1_YEAST	2, ., 7, ., 1, 2, ., 1	0.5257	0.9591	0.1164	yes	N/A
Q9P6P3	PPK15_SCHPO	2, ., 7, ., 1, 1, ., 1	0.5257	0.9591	0.1760	yes	N/A
Q9WUM7	HIPK2_MESAU	2, ., 7, ., 1, 1, ., 1	0.9278	0.9897	0.0830	N/A	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	98
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-23
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-23
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-19
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-18
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-15
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	4e-15
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-14
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	6e-14
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	4e-13
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	8e-13
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	2e-12
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-12
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-12
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-11
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	4e-11
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-10
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	2e-10
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-10
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	3e-10
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	3e-10
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	3e-10
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	4e-10
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	4e-10
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	4e-10
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	6e-10
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	8e-10
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-09
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-09
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	2e-09
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-09
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-09
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-09
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	3e-09
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	3e-09
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	3e-09
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	4e-09
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	5e-09
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	7e-09
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	9e-09
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-08
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-08
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-08
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	2e-08
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-08
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	4e-08
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	4e-08
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	4e-08
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	5e-08
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	5e-08
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	5e-08
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	6e-08
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	6e-08
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	7e-08
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	8e-08
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-07
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-07
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-07
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-07
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-07
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	3e-07
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-07
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	4e-07
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	4e-07
PHA02882	294	PHA02882, PHA02882, putative serine/threonine kina	4e-07
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	5e-07
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	6e-07
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	7e-07
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	8e-07
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-06
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-06
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	1e-06
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	1e-06
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-06
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	2e-06
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	2e-06
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	4e-06
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	6e-06
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	7e-06
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	8e-06
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-05
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	1e-05
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	1e-05
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-05
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-05
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-05
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	2e-05
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	2e-05
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-05
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-05
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	3e-05
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	3e-05
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	3e-05
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	4e-05
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	4e-05
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	4e-05
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	5e-05
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	5e-05
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	5e-05
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	5e-05
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	6e-05
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	6e-05
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	6e-05
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	6e-05
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	6e-05
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	7e-05
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	7e-05
pfam01636	238	pfam01636, APH, Phosphotransferase enzyme family	7e-05
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	7e-05
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	1e-04
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	1e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-04
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	1e-04
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	1e-04
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	1e-04
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-04
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	1e-04
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	2e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-04
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	2e-04
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-04
pfam06293	206	pfam06293, Kdo, Lipopolysaccharide kinase (Kdo/Waa	2e-04
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-04
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-04
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	3e-04
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	3e-04
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	3e-04
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	3e-04
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	4e-04
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	4e-04
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	4e-04
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	5e-04
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	5e-04
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	5e-04
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	6e-04
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	6e-04
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	6e-04
cd05119	187	cd05119, RIO, RIO kinase family, catalytic domain	7e-04
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	8e-04
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	8e-04
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	8e-04
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	0.001
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	0.001
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	0.001
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	0.001
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	0.001
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	0.001
TIGR01982	437	TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase	0.001
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	0.001
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	0.001
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	0.002
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	0.002
cd05145	190	cd05145, RIO1_like, RIO kinase family; RIO1, RIO3	0.002
cd05144	198	cd05144, RIO2_C, RIO kinase family; RIO2, C-termin	0.002
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	0.002
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	0.002
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	0.002
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	0.002
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	0.002
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	0.003
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	0.003
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	0.003
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	0.003
pfam05445	434	pfam05445, Pox_ser-thr_kin, Poxvirus serine/threon	0.004
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	0.004

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 90.7 bits (226), Expect = 1e-23
 Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 5/96 (5%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           +E NLY  +K  K  P     IR I++Q+L  L  + + G  H DLKPEN++    V  P
Sbjct: 80  MEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLL----VSGP 135

Query: 62  YRVKVIDFGSASHV-SKAVCNTYLQSRYYRAPEIIL 96
             VK+ DFG A  + S+     Y+ +R+YRAPEI+L
Sbjct: 136 EVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILL 171

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 88.4 bits (220), Expect = 5e-23
 Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 7/95 (7%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L+D LK+     L     R  L Q+L+AL  L   G++H DLKPENI+L +       V
Sbjct: 83  DLFDLLKKRG--RLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDE----DGHV 136

Query: 65  KVIDFGSASHV-SKAVCNTYLQSRYYRAPEIILGE 98
           K+ DFG A  +       T++ +  Y APE++LG+
Sbjct: 137 KLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGK 171

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 78.4 bits (194), Expect = 2e-19
 Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 6/96 (6%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L D LK+N+   L    I  IL Q+L  L  L   G+IH DLKPENI+L        +V
Sbjct: 77  SLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSD---NGKV 132

Query: 65  KVIDFGSASHV--SKAVCNTYLQSRYYRAPEIILGE 98
           K+ DFG +  +   K++  T + +  Y APE++LG+
Sbjct: 133 KLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGK 168

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 75.4 bits (186), Expect = 4e-18
 Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 8/94 (8%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L+D+L +    PL     + I  Q+L  L  L   G+IH DLKPENI+L     +   VK
Sbjct: 85  LFDYLSRGG--PLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILLD----ENGVVK 138

Query: 66  VIDFGSA--SHVSKAVCNTYLQSRYYRAPEIILG 97
           + DFG A     S +   T++ + +Y APE++LG
Sbjct: 139 IADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLG 172

Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 67.6 bits (166), Expect = 4e-15
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 6/94 (6%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L D LK +    L    I  +  ++L  L  L   G+IH D+K  NI+L         VK
Sbjct: 84  LKDLLK-STNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTS----DGEVK 138

Query: 66  VIDFGSASHVSKAV-CNTYLQSRYYRAPEIILGE 98
           +IDFG ++ +S     NT + + Y+ APE+I G+
Sbjct: 139 LIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGK 172

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 67.7 bits (166), Expect = 4e-15
 Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 7/97 (7%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           +++ NLY+ +K  +  PLP K ++  ++Q+L +L  + + G+ H D+KPENI++ D    
Sbjct: 81  LMDMNLYELIK-GRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD---- 135

Query: 61  PYRVKVIDFGSASHV-SKAVCNTYLQSRYYRAPEIIL 96
              +K+ DFGS   + SK     Y+ +R+YRAPE +L
Sbjct: 136 -DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLL 171

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 65.8 bits (161), Expect = 2e-14
 Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 7/98 (7%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           ++ +LY  +K  +   LP   I+  L+Q+L  L      G++H DLKPEN+++       
Sbjct: 80  MDTDLYKLIKDRQR-GLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI----NTE 134

Query: 62  YRVKVIDFGSASHVSKAVC--NTYLQSRYYRAPEIILG 97
             +K+ DFG A      V     Y+ +R+YRAPE++LG
Sbjct: 135 GVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLG 172

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 64.6 bits (158), Expect = 6e-14
 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 8/99 (8%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           +E+ L + L+ +    LP   +R  + Q+L A+       +IH D+KPENI LV      
Sbjct: 82  VERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENI-LVSESGV- 138

Query: 62  YRVKVIDFGSASHV---SKAVCNTYLQSRYYRAPEIILG 97
             +K+ DFG A  +     +    Y+ +R+YRAPE+++G
Sbjct: 139 --LKLCDFGFARALRARPASPLTDYVATRWYRAPELLVG 175

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 62.2 bits (152), Expect = 4e-13
 Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 10/98 (10%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L   LK  KF  LP   IR    Q+L  L  L   G++H D+K  NI LVD       V
Sbjct: 87  SLSSLLK--KFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANI-LVDS---DGVV 140

Query: 65  KVIDFGSASHVSKAVCNTYLQSR----YYRAPEIILGE 98
           K+ DFG A  +          S     Y+ APE+I GE
Sbjct: 141 KLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGE 178

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 61.9 bits (151), Expect = 8e-13
 Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 8/93 (8%)

Query: 4   QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
            +L + +K  K S     +I+ +++Q+L  L  +   G+IH DLKP NI     V +   
Sbjct: 104 ADLNNIVKCQKLSD---DHIQFLVYQILRGLKYIHSAGIIHRDLKPSNI----AVNEDCE 156

Query: 64  VKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 96
           +K++DFG A H    +   Y+ +R+YRAPEI+L
Sbjct: 157 LKILDFGLARHTDDEM-TGYVATRWYRAPEIML 188

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 60.9 bits (148), Expect = 2e-12
 Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 5/73 (6%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YL 84
           +L+Q+L  +  L   G+IH DLKP NI+    V+    +K++DFG A     +   T Y+
Sbjct: 123 LLYQMLCGIKHLHSAGIIHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYV 178

Query: 85  QSRYYRAPEIILG 97
            +RYYRAPE+ILG
Sbjct: 179 VTRYYRAPEVILG 191

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 17/104 (16%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIML-VDPVRQ 60
            + +L  +L +    PL    I+ I++Q+L  L       ++H DLKP+NI++  D V  
Sbjct: 80  CDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGV-- 136

Query: 61  PYRVKVIDFGSASHVSKAVC---NTY---LQSRYYRAPEIILGE 98
              +K+ DFG A    +A      TY   + + +YRAPEI+LG 
Sbjct: 137 ---LKLADFGLA----RAFGIPLRTYTHEVVTLWYRAPEILLGS 173

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 59.9 bits (146), Expect = 3e-12
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 14/84 (16%)

Query: 3   EQNLY---------DFLKQ-NKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENI 52
           E+NLY         + L+   K+  L  K  R    ++L AL  L   G+IH DLKPENI
Sbjct: 74  EENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENI 133

Query: 53  MLVDPVRQPYRVKVIDFGSASHVS 76
           +L     +   +K+ DFG+A  + 
Sbjct: 134 LL----DKDMHIKITDFGTAKVLD 153

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 58.7 bits (142), Expect = 1e-11
 Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 6/80 (7%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
           PL    I  I H  L  L  L     IH D+K  NI+L +P      VK+ DFGSAS VS
Sbjct: 111 PLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPG----TVKLADFGSASLVS 166

Query: 77  KAVCNTYLQSRYYRAPEIIL 96
            A  N+++ + Y+ APE+IL
Sbjct: 167 PA--NSFVGTPYWMAPEVIL 184

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 57.3 bits (138), Expect = 4e-11
 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 5/73 (6%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YL 84
           +L+Q+L  +  L   G+IH DLKP NI+    V+    +K++DFG A         T Y+
Sbjct: 128 LLYQMLCGIKHLHSAGIIHRDLKPSNIV----VKSDCTLKILDFGLARTACTNFMMTPYV 183

Query: 85  QSRYYRAPEIILG 97
            +RYYRAPE+ILG
Sbjct: 184 VTRYYRAPEVILG 196

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 56.3 bits (134), Expect = 1e-10
 Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 12/102 (11%)

Query: 5   NLYDFLKQNKF-SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
           +L D LK+     PL       IL Q+L+AL  L   G+IH D+KPENI+L    R    
Sbjct: 84  SLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRV--- 140

Query: 64  VKVIDFGSASHVSKAV--------CNTYLQSRYYRAPEIILG 97
           VK+IDFG A  +             +T + +  Y APE++LG
Sbjct: 141 VKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLG 182

Length = 384

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 55.6 bits (134), Expect = 2e-10
 Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 5/80 (6%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
           PL  ++I+  L+Q+L  L  +   G++H DLKP NI+    + +   +K+ DFG A  + 
Sbjct: 104 PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNIL----INENCDLKICDFGLA-RIQ 158

Query: 77  KAVCNTYLQSRYYRAPEIIL 96
                 Y+ +RYYRAPEI+L
Sbjct: 159 DPQMTGYVSTRYYRAPEIML 178

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 54.9 bits (133), Expect = 2e-10
 Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 11/82 (13%)

Query: 23  IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK----- 77
            R I++Q+L AL  +    +IH DLKP NI+L        RVK+ DFG A  +S+     
Sbjct: 109 KRYIMYQLLKALKYIHSGNVIHRDLKPSNILL----NSDCRVKLADFGLARSLSELEENP 164

Query: 78  --AVCNTYLQSRYYRAPEIILG 97
              V   Y+ +R+YRAPEI+LG
Sbjct: 165 ENPVLTDYVATRWYRAPEILLG 186

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 54.6 bits (131), Expect = 3e-10
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 20/100 (20%)

Query: 14  KFSPLPLKYIRPILHQVLTALLKL-KQLGLIHADLKPENIML------VDPVR------Q 60
           K  P   +++  I+ Q   AL     +L L+H DLKPENI++      VDPV        
Sbjct: 224 KHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPD 283

Query: 61  PYRVKVIDFGSA---SHVSKAVCNTYLQSRYYRAPEIILG 97
           P RV++ D G      H   A+ +T    R+YR+PE++LG
Sbjct: 284 PCRVRICDLGGCCDERHSRTAIVST----RHYRSPEVVLG 319

Length = 467

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 54.7 bits (131), Expect = 3e-10
 Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 5/73 (6%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YL 84
           +L+Q+L  +  L   G+IH DLKP NI+    V+    +K++DFG A     +   T Y+
Sbjct: 124 LLYQMLCGIKHLHSAGIIHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYV 179

Query: 85  QSRYYRAPEIILG 97
            +RYYRAPE+ILG
Sbjct: 180 VTRYYRAPEVILG 192

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 54.3 bits (131), Expect = 3e-10
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 6/83 (7%)

Query: 18  LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           L    +R  L Q+L  +       +IH D+KPENI+    V Q   VK+ DFG A  ++ 
Sbjct: 97  LDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENIL----VSQSGVVKLCDFGFARTLAA 152

Query: 78  A--VCNTYLQSRYYRAPEIILGE 98
              V   Y+ +R+YRAPE+++G+
Sbjct: 153 PGEVYTDYVATRWYRAPELLVGD 175

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 54.3 bits (130), Expect = 4e-10
 Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 7/90 (7%)

Query: 8   DFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI 67
           D L+ +K  PL    I  I H  L  L  L    +IH D+K  NI+L     +P +VK+ 
Sbjct: 109 DLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT----EPGQVKLA 163

Query: 68  DFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           DFGSAS  S A  N+++ + Y+ APE+IL 
Sbjct: 164 DFGSASKSSPA--NSFVGTPYWMAPEVILA 191

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 54.3 bits (130), Expect = 4e-10
 Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 7/90 (7%)

Query: 8   DFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI 67
           D L+ +K  PL    I  I H  L  L  L    +IH D+K  NI+L     +P +VK+ 
Sbjct: 113 DLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT----EPGQVKLA 167

Query: 68  DFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           DFGSAS  S A  N+++ + Y+ APE+IL 
Sbjct: 168 DFGSASIASPA--NSFVGTPYWMAPEVILA 195

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 54.3 bits (130), Expect = 4e-10
 Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 5/73 (6%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YL 84
           +L+Q+L  +  L   G+IH DLKP NI+    V+    +K++DFG A     +   T Y+
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYV 186

Query: 85  QSRYYRAPEIILG 97
            +RYYRAPE+ILG
Sbjct: 187 VTRYYRAPEVILG 199

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 53.4 bits (129), Expect = 6e-10
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 8/95 (8%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L + L+ ++  PLP   ++  +  +L  +  +   G++H DLKP N+ L+        +K
Sbjct: 85  LSEVLR-DEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANL-LISADGV---LK 139

Query: 66  VIDFGSASHVSKAVCNTY---LQSRYYRAPEIILG 97
           + DFG A   S+     Y   + +R+YRAPE++ G
Sbjct: 140 IADFGLARLFSEEEPRLYSHQVATRWYRAPELLYG 174

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 53.4 bits (128), Expect = 8e-10
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 5/80 (6%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
           PL    ++ +++Q+L  L  +   G+IH DLKP N+     V +   +K++DFG A H +
Sbjct: 113 PLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNL----AVNEDCELKILDFGLARH-A 167

Query: 77  KAVCNTYLQSRYYRAPEIIL 96
            A    Y+ +R+YRAPE+IL
Sbjct: 168 DAEMTGYVVTRWYRAPEVIL 187

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 52.7 bits (127), Expect = 1e-09
 Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 10/87 (11%)

Query: 18  LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           L    IR    Q+L  L  L   G++H D+KP NI L         +K+ DFG A  +  
Sbjct: 96  LDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNG----VIKLGDFGCAVKLKN 151

Query: 78  A--VCNTYLQS----RYYRAPEIILGE 98
                   +QS      Y APE+I G 
Sbjct: 152 NTTTMGEEVQSLAGTPAYMAPEVITGG 178

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 6/88 (6%)

Query: 13  NKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA 72
           +K      +  R    +++ AL  L  LG+I+ DLKPENI+L       + +K+ DFG A
Sbjct: 85  SKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDA---DGH-IKLTDFGLA 140

Query: 73  SHVSK--AVCNTYLQSRYYRAPEIILGE 98
             +S   +  NT+  +  Y APE++LG+
Sbjct: 141 KELSSEGSRTNTFCGTPEYLAPEVLLGK 168

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 52.7 bits (126), Expect = 2e-09
 Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 22  YIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN 81
           +++ +++Q+L  L  +    +IH DLKP N+     V +   +K++DFG A H    +  
Sbjct: 121 HVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLARHTDDEMTG 176

Query: 82  TYLQSRYYRAPEIIL 96
            Y+ +R+YRAPEI+L
Sbjct: 177 -YVATRWYRAPEIML 190

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 52.4 bits (126), Expect = 2e-09
 Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 6/83 (7%)

Query: 18  LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           +P   I+ I+ Q L A+    +   IH D+KPENI++     +  ++K+ DFG A  ++ 
Sbjct: 97  VPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILIT----KQGQIKLCDFGFARILTG 152

Query: 78  AVCN--TYLQSRYYRAPEIILGE 98
              +   Y+ +R+YRAPE+++G+
Sbjct: 153 PGDDYTDYVATRWYRAPELLVGD 175

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 11/101 (10%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           +E +L+  +K  +  PL   +I+  L+Q+L  L  L    +IH DLKP NI+    V   
Sbjct: 86  METDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNIL----VNSN 139

Query: 62  YRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIILG 97
             +K+ DFG A         K     Y+ +R+YRAPE++L 
Sbjct: 140 CDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLS 180

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 52.0 bits (124), Expect = 2e-09
 Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 6/90 (6%)

Query: 8   DFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI 67
           D +K  K + L  ++I  I  ++L  L  L Q  +IH D+K +N++L +       VK++
Sbjct: 98  DLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA----EVKLV 153

Query: 68  DFGSASHVSKAVC--NTYLQSRYYRAPEII 95
           DFG ++ + + V   NT++ + Y+ APE+I
Sbjct: 154 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 183

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 52.0 bits (124), Expect = 3e-09
 Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 7/90 (7%)

Query: 8   DFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI 67
           D L+ +K  PL    I  + H  L  L  L    +IH D+K  NI+L     +P  VK+ 
Sbjct: 103 DLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS----EPGLVKLG 157

Query: 68  DFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           DFGSAS ++ A  N ++ + Y+ APE+IL 
Sbjct: 158 DFGSASIMAPA--NXFVGTPYWMAPEVILA 185

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 51.9 bits (124), Expect = 3e-09
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 5/89 (5%)

Query: 8   DFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI 67
           D  K  K   L    I+ +++Q+L  L  +   G+IH DLKP N+     V +   +K++
Sbjct: 105 DLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNL----AVNEDCELKIL 160

Query: 68  DFGSASHVSKAVCNTYLQSRYYRAPEIIL 96
           DFG A      +   Y+ +R+YRAPE+IL
Sbjct: 161 DFGLARQTDSEMTG-YVVTRWYRAPEVIL 188

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 52.0 bits (124), Expect = 3e-09
 Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 8/83 (9%)

Query: 18  LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV-- 75
           LPL  ++   +Q+  AL  +    + H DLKP+N +L+DP    + +K+ DFGSA ++  
Sbjct: 167 LPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQN-LLIDP--NTHTLKLCDFGSAKNLLA 223

Query: 76  -SKAVCNTYLQSRYYRAPEIILG 97
             ++V  +Y+ SR+YRAPE++LG
Sbjct: 224 GQRSV--SYICSRFYRAPELMLG 244

Length = 440

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 51.6 bits (123), Expect = 4e-09
 Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 5/83 (6%)

Query: 14  KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L  ++++ +++Q+L  L  +   G+IH DLKP N+     V +   ++++DFG A 
Sbjct: 111 KCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNV----AVNEDCELRILDFGLAR 166

Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
                +   Y+ +R+YRAPEI+L
Sbjct: 167 QADDEMTG-YVATRWYRAPEIML 188

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 51.1 bits (123), Expect = 5e-09
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)

Query: 9   FLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVID 68
             K+ K   L  ++I  IL + L  L  L +  +IH D+K +NI+L         VK++D
Sbjct: 103 LRKKGK--RLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNA----EVKLVD 156

Query: 69  FGSASHVSKAVC--NTYLQSRYYRAPEIILGE 98
           FG ++ +   +   NT++ + Y+ APE+I  +
Sbjct: 157 FGVSAQLDSTLGRRNTFIGTPYWMAPEVIACD 188

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 50.7 bits (122), Expect = 7e-09
 Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 19/106 (17%)

Query: 7   YDFL------KQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           +D        +Q K   +P   ++ +L Q+L  +  L    ++H DLKP NI+++    +
Sbjct: 88  HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPE 147

Query: 61  PYRVKVIDFGSASHVSKA---------VCNTYLQSRYYRAPEIILG 97
              VK+ D G A   +           V  T     +YRAPE++LG
Sbjct: 148 RGVVKIGDLGLARLFNAPLKPLADLDPVVVTI----WYRAPELLLG 189

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 50.2 bits (120), Expect = 9e-09
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 16/89 (17%)

Query: 14  KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
               LP  + +  + +V+  +  L Q G+IH D+KPEN +L+D   Q   +K+ DFG   
Sbjct: 90  TLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPEN-LLID---QTGHLKLTDFG--- 142

Query: 74  HVSKAVCNTYLQSRY-----YRAPEIILG 97
            +S+         ++     Y APE ILG
Sbjct: 143 -LSRNG---LENKKFVGTPDYLAPETILG 167

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 50.1 bits (120), Expect = 1e-08
 Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 6/86 (6%)

Query: 14  KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K  P+  KYI  I+ +VL AL  + ++G+IH D+K  NI+    V     VK+ DFG A+
Sbjct: 94  KAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANIL----VTNTGNVKLCDFGVAA 149

Query: 74  HVSKAVC--NTYLQSRYYRAPEIILG 97
            +++     +T++ + Y+ APE+I  
Sbjct: 150 LLNQNSSKRSTFVGTPYWMAPEVITE 175

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 15/75 (20%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK---AVCNT--Y 83
           QV+ AL  L  L +++ DLKPEN+ L+D     Y +K+ DFG A  V      +C T  Y
Sbjct: 109 QVVLALEYLHSLDIVYRDLKPENL-LLD--SDGY-IKITDFGFAKRVKGRTYTLCGTPEY 164

Query: 84  LQSRYYRAPEIILGE 98
           L      APEIIL +
Sbjct: 165 L------APEIILSK 173

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 6/84 (7%)

Query: 14  KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   YI  IL +VL  L  L + G IH D+K  NI+L +       VK+ DFG + 
Sbjct: 91  KPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEG----DVKLADFGVSG 146

Query: 74  HVSKAVC--NTYLQSRYYRAPEII 95
            ++  +   NT++ + ++ APE+I
Sbjct: 147 QLTSTMSKRNTFVGTPFWMAPEVI 170

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 49.7 bits (118), Expect = 2e-08
 Identities = 24/51 (47%), Positives = 38/51 (74%), Gaps = 6/51 (11%)

Query: 23  IRPILHQVLTALLKLKQLGLIHADLKPENIML-VDPVRQPYRVKVIDFGSA 72
           I+ ++ QVLT L KL ++G++H D+KPEN+++ VD      +VK+IDFG+A
Sbjct: 311 IKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDG-----QVKIIDFGAA 356

Length = 507

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 10/86 (11%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------ 70
           PL  ++IR  L+Q+L  L  +    +IH DLKP N++    V +   +++ DFG      
Sbjct: 103 PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLL----VNEDCELRIGDFGMARGLS 158

Query: 71  SASHVSKAVCNTYLQSRYYRAPEIIL 96
           S+    K     Y+ +R+YRAPE++L
Sbjct: 159 SSPTEHKYFMTEYVATRWYRAPELLL 184

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 48.8 bits (117), Expect = 4e-08
 Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 11/99 (11%)

Query: 3   EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY 62
           +Q+L  +L +     LP + I+ ++ Q+L  +  L    ++H DLKP+NI+    V    
Sbjct: 89  DQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNIL----VTSDG 144

Query: 63  RVKVIDFGSA----SHVSKAVCNTYLQSRYYRAPEIILG 97
           +VK+ DFG A      ++       L   +YRAPE++L 
Sbjct: 145 QVKIADFGLARIYSFEMALTSVVVTL---WYRAPEVLLQ 180

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 48.4 bits (115), Expect = 4e-08
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           ++Q+L  +L +     LP + I+ ++ Q L  L  L    ++H DLKPENI+    V   
Sbjct: 89  VDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENIL----VTSG 144

Query: 62  YRVKVIDFGSASHVS-KAVCNTYLQSRYYRAPEIIL 96
            +VK+ DFG A   S +      + + +YRAPE++L
Sbjct: 145 GQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLL 180

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 48.6 bits (116), Expect = 4e-08
 Identities = 35/105 (33%), Positives = 47/105 (44%), Gaps = 15/105 (14%)

Query: 3   EQNLYDFLK----------QNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENI 52
           E NLY FL+            K+   P   IR    Q+L  L  L     +H D+K  NI
Sbjct: 74  EDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANI 133

Query: 53  MLVDPVRQPYRVKVIDFGSASHVSK-AVCNTYLQSRYYRAPEIIL 96
            LVD       VK+ DFG A  V + +   ++  S Y+ APE+I 
Sbjct: 134 -LVDTNGV---VKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIA 174

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 48.5 bits (116), Expect = 5e-08
 Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 6/94 (6%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRV 64
           L   LK+ +   +P + +  I   VL  L  L  +  +IH D+KP NI LV+   Q   +
Sbjct: 86  LDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNI-LVNSRGQ---I 140

Query: 65  KVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
           K+ DFG +  +  ++  T++ +  Y APE I G 
Sbjct: 141 KLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGN 174

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 48.4 bits (116), Expect = 5e-08
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 18/104 (17%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIML---VDP 57
           ++E +LY  +K    S   ++Y    L+Q+L  L  +    ++H DLKP N++L    D 
Sbjct: 89  LMETDLYKLIKTQHLSNDHIQYF---LYQILRGLKYIHSANVLHRDLKPSNLLLNTNCD- 144

Query: 58  VRQPYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIIL 96
                 +K+ DFG A      H        Y+ +R+YRAPEI+L
Sbjct: 145 ------LKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIML 182

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 48.5 bits (115), Expect = 5e-08
 Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 6/90 (6%)

Query: 8   DFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI 67
           D +K  K + L   +I  I  ++L  L  L    +IH D+K +N++L +       VK++
Sbjct: 108 DLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENA----EVKLV 163

Query: 68  DFGSASHVSKAVC--NTYLQSRYYRAPEII 95
           DFG ++ + + V   NT++ + Y+ APE+I
Sbjct: 164 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 193

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 48.2 bits (115), Expect = 6e-08
 Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 7/71 (9%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSKAVCNTYLQSR 87
           ++  A+  L +LG IH DLKPEN  L+D       +K+ DFG S   V+ A  N+ + S 
Sbjct: 109 EMFEAVDALHELGYIHRDLKPEN-FLID---ASGHIKLTDFGLSKGIVTYA--NSVVGSP 162

Query: 88  YYRAPEIILGE 98
            Y APE++ G+
Sbjct: 163 DYMAPEVLRGK 173

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 48.0 bits (115), Expect = 6e-08
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 11/98 (11%)

Query: 5   NLYDFLKQN-KFSPLPLKYIRPILHQVLTALLKL-KQLGLIHADLKPENIMLVDPVRQPY 62
           +L D LK+  K     L YI     Q+L  L  L  +  +IH D+KP N++    +    
Sbjct: 85  SLADLLKKVGKIPEPVLAYI---ARQILKGLDYLHTKRHIIHRDIKPSNLL----INSKG 137

Query: 63  RVKVIDFGSASHV--SKAVCNTYLQSRYYRAPEIILGE 98
            VK+ DFG +  +  +   CNT++ +  Y +PE I GE
Sbjct: 138 EVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGE 175

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 48.1 bits (114), Expect = 7e-08
 Identities = 29/99 (29%), Positives = 59/99 (59%), Gaps = 8/99 (8%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           +E+N+ + L++      P K +R  ++Q++ A+    +  ++H D+KPEN++    +   
Sbjct: 82  VEKNMLELLEEMPNGVPPEK-VRSYIYQLIKAIHWCHKNDIVHRDIKPENLL----ISHN 136

Query: 62  YRVKVIDFGSASHVSK---AVCNTYLQSRYYRAPEIILG 97
             +K+ DFG A ++S+   A    Y+ +R+YR+PE++LG
Sbjct: 137 DVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLG 175

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 47.6 bits (114), Expect = 8e-08
 Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 5/70 (7%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV-SKAVCNTYLQSR 87
            V+ A   L   G+I+ DLKPEN++L       Y VK++DFG A  + S     T+  + 
Sbjct: 101 CVVLAFEYLHNRGIIYRDLKPENLLLDS---NGY-VKLVDFGFAKKLKSGQKTWTFCGTP 156

Query: 88  YYRAPEIILG 97
            Y APEIIL 
Sbjct: 157 EYVAPEIILN 166

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 12/92 (13%)

Query: 11  KQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG 70
            + KF+   +K     + Q+L  L  L   G++H D+K  NI L++       +K+ DFG
Sbjct: 93  PEVKFTESQIKCY---MKQLLEGLQYLHSNGILHRDIKGSNI-LIN---NDGVLKLADFG 145

Query: 71  SASHVSKAVCNTYLQSR----YYRAPEIILGE 98
            A   +K     Y  +R    +YR PE++LG 
Sbjct: 146 LARPYTKRNSADY-TNRVITLWYRPPELLLGA 176

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 47.0 bits (112), Expect = 1e-07
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 19/92 (20%)

Query: 16  SPLPL--KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA- 72
           SP PL   +++  L+Q+L  L  L   G++H D+KP N++    V     +K+ DFG A 
Sbjct: 96  SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLL----VNSNCVLKICDFGLAR 151

Query: 73  -------SHVSKAVCNTYLQSRYYRAPEIILG 97
                   H+++ V      ++YYRAPEI++G
Sbjct: 152 VEEPDESKHMTQEVV-----TQYYRAPEILMG 178

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 46.7 bits (111), Expect = 2e-07
 Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 8/99 (8%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           L Q+L  F+  +  S +PL  I+  L Q+L  L       ++H DLKP+N++    +   
Sbjct: 81  LHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INTE 136

Query: 62  YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
             +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 137 GAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 174

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 46.8 bits (111), Expect = 2e-07
 Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 8/78 (10%)

Query: 25  PILHQVLTALLK----LKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC 80
            +L ++  A++K    L  L ++H D+KP N MLV+   Q   VK+ DFG ++ +  ++ 
Sbjct: 95  HVLGRIAVAVVKGLTYLWSLKILHRDVKPSN-MLVNTRGQ---VKLCDFGVSTQLVNSIA 150

Query: 81  NTYLQSRYYRAPEIILGE 98
            TY+ +  Y APE I GE
Sbjct: 151 KTYVGTNAYMAPERISGE 168

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 46.3 bits (110), Expect = 2e-07
 Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 10/102 (9%)

Query: 2   LEQNLYDFLKQNKFS---PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV 58
           L+ +L  F+  N      PLP K I+  ++Q+L  +    + G++H DLKP+N+ LVD  
Sbjct: 88  LDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNL-LVD-- 144

Query: 59  RQPYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
           +Q   +K+ D G     S  V  +Y     + +YRAPE++LG
Sbjct: 145 KQKGLLKIADLGLGRAFSIPV-KSYTHEIVTLWYRAPEVLLG 185

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 46.2 bits (109), Expect = 3e-07
 Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 5/96 (5%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           ++Q+L  +L +     +P + I+ ++ Q+L  L  L    ++H DLKP+NI+    V   
Sbjct: 91  VDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNIL----VTSS 146

Query: 62  YRVKVIDFGSASHVS-KAVCNTYLQSRYYRAPEIIL 96
            ++K+ DFG A   S +    + + + +YRAPE++L
Sbjct: 147 GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 182

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 46.2 bits (110), Expect = 3e-07
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 11/97 (11%)

Query: 6   LYDFLKQ-NKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           L D +K       L    I  +L +VL  L  L   G IH D+K  NI+L +       V
Sbjct: 86  LLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGE----DGSV 141

Query: 65  KVIDFGSASHVSKAVC------NTYLQSRYYRAPEII 95
           K+ DFG ++ ++           T++ +  + APE++
Sbjct: 142 KIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVM 178

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 45.9 bits (109), Expect = 4e-07
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 6/92 (6%)

Query: 5   NLYDFLKQNKF--SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY 62
           +L   + + K     +P + I  I  Q+L  L  L +  ++H DLK  NI+LV       
Sbjct: 85  DLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV----AND 140

Query: 63  RVKVIDFGSASHVSKAVCNTYLQSRYYRAPEI 94
            VK+ D G +  + K +  T + + +Y APE+
Sbjct: 141 LVKIGDLGISKVLKKNMAKTQIGTPHYMAPEV 172

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 45.5 bits (108), Expect = 4e-07
 Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 6/84 (7%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHV 75
            L    IR +  Q+L AL  L    +IH DLK  NI+L         VK+ DFG SA + 
Sbjct: 99  GLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT----LDGDVKLADFGVSAKNK 154

Query: 76  S-KAVCNTYLQSRYYRAPEIILGE 98
           S     +T++ + Y+ APE++  E
Sbjct: 155 STLQKRDTFIGTPYWMAPEVVACE 178

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional

 Score = 45.7 bits (108), Expect = 4e-07
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 6/73 (8%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           L +N  +  K+ K     L  I+ I+  +LT L  + + G+ H D+KPENIM    V   
Sbjct: 109 LVENTKEIFKRIKCKNKKL--IKNIMKDMLTTLEYIHEHGISHGDIKPENIM----VDGN 162

Query: 62  YRVKVIDFGSASH 74
            R  +ID+G ASH
Sbjct: 163 NRGYIIDYGIASH 175

Length = 294

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 45.6 bits (108), Expect = 5e-07
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 3/53 (5%)

Query: 21  KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K I+ I+ Q+L AL  L   G++H D+KP+NI+  +        K+ID G+A+
Sbjct: 255 KIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSG---SFKIIDLGAAA 304

Length = 566

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 45.2 bits (107), Expect = 6e-07
 Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 6/71 (8%)

Query: 27  LHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG--SASHVSKAVCNTYL 84
           L ++  AL  L Q G+I+ DLKPENI+L         VK+ DFG    S     V +T+ 
Sbjct: 106 LSEISLALEHLHQQGIIYRDLKPENILL----DAQGHVKLTDFGLCKESIHEGTVTHTFC 161

Query: 85  QSRYYRAPEII 95
            +  Y APEI+
Sbjct: 162 GTIEYMAPEIL 172

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 44.9 bits (107), Expect = 7e-07
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L D + QN F  +    I  +  +VL  L  L    +IH D+K +NI+L     +   V
Sbjct: 101 SLTDIITQN-FVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL----SKDGSV 155

Query: 65  KVIDFGSASHVSKAVC--NTYLQSRYYRAPEIILG 97
           K+ DFG A+ ++K     N+ + + Y+ APE+I  
Sbjct: 156 KLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKR 190

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 44.9 bits (107), Expect = 8e-07
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 10/96 (10%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLV-DPVRQPYRV 64
           L   +K  KF P P   +   ++QVL  L  L + G+IH D+K  NI+   D V     V
Sbjct: 86  LRQIIK--KFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGV-----V 138

Query: 65  KVIDFGSASHVSKAV--CNTYLQSRYYRAPEIILGE 98
           K+ DFG A+ ++       + + + Y+ APE+I   
Sbjct: 139 KLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMS 174

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 14/86 (16%)

Query: 23  IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG--SASHVSKAV- 79
            R  + +++ AL  L   G+IH DLKP+NI L+D       +K+ DFG      V + + 
Sbjct: 95  ARIYIAEIVLALEYLHSNGIIHRDLKPDNI-LID---SNGHLKLTDFGLSKVGLVRRQIN 150

Query: 80  -------CNTYLQSRYYRAPEIILGE 98
                      + +  Y APE+ILG+
Sbjct: 151 LNDDEKEDKRIVGTPDYIAPEVILGQ 176

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 44.3 bits (105), Expect = 1e-06
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-----S 71
           PL   + +  ++Q+L  L  +    ++H DLKP N++    V     +K+ DFG     S
Sbjct: 101 PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLL----VNADCELKICDFGLARGFS 156

Query: 72  ASHVSKAVCNT-YLQSRYYRAPEIIL 96
            +    A   T Y+ +R+YRAPEI+L
Sbjct: 157 ENPGENAGFMTEYVATRWYRAPEIML 182

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 44.3 bits (104), Expect = 1e-06
 Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 12/107 (11%)

Query: 3   EQNLYDFLKQNKFSP-------LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLV 55
           E +L+  +K ++ S        LP   ++ +L+Q+L  +  L    ++H DLKP NI+++
Sbjct: 83  EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVM 142

Query: 56  DPVRQPYRVKVIDFGSASHVSK-----AVCNTYLQSRYYRAPEIILG 97
               +  RVK+ D G A   +      A  +  + + +YRAPE++LG
Sbjct: 143 GEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG 189

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 44.3 bits (104), Expect = 1e-06
 Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 12/107 (11%)

Query: 3   EQNLYDFLKQNKFSP-------LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLV 55
           E +L+  +K ++ S        LP   ++ +L+Q+L  +  L    ++H DLKP NI+++
Sbjct: 83  EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVM 142

Query: 56  DPVRQPYRVKVIDFGSASHVSK-----AVCNTYLQSRYYRAPEIILG 97
               +  RVK+ D G A   +      A  +  + + +YRAPE++LG
Sbjct: 143 GEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG 189

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 6/81 (7%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
           PL    I  +  + L  L  L + G IH D+K  NI+L +       VK+ DFG ++ ++
Sbjct: 97  PLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTE----DGDVKLADFGVSAQLT 152

Query: 77  KAVC--NTYLQSRYYRAPEII 95
             +    +++ + Y+ APE+ 
Sbjct: 153 ATIAKRKSFIGTPYWMAPEVA 173

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 44.0 bits (104), Expect = 2e-06
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)

Query: 14  KFSPLPLKYIRPILHQVLTALLKL-KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA 72
           K  P+P++ +  I   V+  L  L     ++H D+KP NI+    V    ++K+ DFG +
Sbjct: 96  KGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNIL----VNSRGQIKLCDFGVS 151

Query: 73  SHVSKAVCNTYLQSRYYRAPEIILGE 98
             +  ++ +T++ +  Y +PE I G 
Sbjct: 152 GELINSIADTFVGTSTYMSPERIQGG 177

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 44.1 bits (104), Expect = 2e-06
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 10/91 (10%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-----S 71
            LP      ++ QVL AL      G++H DLKP+NIM+     +P+  KV+DFG      
Sbjct: 75  ALPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRPH-AKVLDFGIGTLLP 133

Query: 72  ASHVSKAVCNT----YLQSRYYRAPEIILGE 98
               +     T     L +  Y APE + GE
Sbjct: 134 GVRDADVATLTRTTEVLGTPTYCAPEQLRGE 164

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 42.8 bits (101), Expect = 4e-06
 Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 30  VLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYY 89
           VL  L  L    +IH D+KP NI+L    R+  +VK+ DFG +  +  ++  T+  + +Y
Sbjct: 114 VLKGLSYLHSRKIIHRDIKPSNILLT---RKG-QVKLCDFGVSGELVNSLAGTFTGTSFY 169

Query: 90  RAPEIILGE 98
            APE I G+
Sbjct: 170 MAPERIQGK 178

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 42.2 bits (100), Expect = 6e-06
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 11/94 (11%)

Query: 12  QNKFSPLPLKYIRPILHQVLTAL-----LKLKQLGLIHADLKPENIMLVDPVRQPYRVKV 66
           + +   +  ++I  IL Q+L AL            ++H DLKP NI L         VK+
Sbjct: 96  KKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANN----NVKL 151

Query: 67  IDFGSAS--HVSKAVCNTYLQSRYYRAPEIILGE 98
            DFG A       +   TY+ + YY +PE +   
Sbjct: 152 GDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHM 185

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 42.1 bits (99), Expect = 7e-06
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 15/84 (17%)

Query: 21  KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY-RVKVIDFGSAS-----H 74
           KY R IL      +  L    ++H D+K  NI+     R     VK+ DFG++       
Sbjct: 108 KYTRQILE----GVEYLHSNMIVHRDIKGANIL-----RDSAGNVKLGDFGASKRLQTIC 158

Query: 75  VSKAVCNTYLQSRYYRAPEIILGE 98
            S     +   + Y+ +PE+I GE
Sbjct: 159 SSGTGMKSVTGTPYWMSPEVISGE 182

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 42.3 bits (99), Expect = 8e-06
 Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 7/81 (8%)

Query: 18  LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           +P K+ R    +V+ AL  +  +G IH D+KP+N ML+D   +   +K+ DFG+   ++K
Sbjct: 139 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN-MLLD---KSGHLKLADFGTCMKMNK 194

Query: 78  ---AVCNTYLQSRYYRAPEII 95
                C+T + +  Y +PE++
Sbjct: 195 EGMVRCDTAVGTPDYISPEVL 215

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 41.8 bits (98), Expect = 1e-05
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 14/92 (15%)

Query: 13  NKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV-KVIDFGS 71
           N+F PLP         Q+L  +  L    ++H D+K  N+ML+     P  + K+IDFG 
Sbjct: 94  NRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM-----PNGIIKLIDFGC 148

Query: 72  AS-------HVSKA-VCNTYLQSRYYRAPEII 95
           A        H + + +  +   + Y+ APE+I
Sbjct: 149 ARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVI 180

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 41.7 bits (98), Expect = 1e-05
 Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 8/84 (9%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
            L    ++   +Q+L  +    +  ++H DLKP+N+++     +   +K+ DFG A    
Sbjct: 96  ALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLI----NKRGELKLADFGLARAFG 151

Query: 77  KAVCNTY---LQSRYYRAPEIILG 97
             V NT+   + + +YRAP+++LG
Sbjct: 152 IPV-NTFSNEVVTLWYRAPDVLLG 174

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 41.7 bits (98), Expect = 1e-05
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 11/100 (11%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           +E +L + L+Q    PL  ++ R  ++Q+L  L  +    ++H DLKP N+ +     + 
Sbjct: 98  METDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFI---NTED 151

Query: 62  YRVKVIDFGSA----SHVS-KAVCNTYLQSRYYRAPEIIL 96
             +K+ DFG A     H S K   +  L +++YR+P ++L
Sbjct: 152 LVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLL 191

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 6/83 (7%)

Query: 16  SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV 75
             L  + I  IL+Q L  L  L     IH D+K  NI L++   Q    K+ DFG +  +
Sbjct: 94  KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNI-LLNEEGQ---AKLADFGVSGQL 149

Query: 76  SK--AVCNTYLQSRYYRAPEIIL 96
           +   A  NT + + ++ APE+I 
Sbjct: 150 TDTMAKRNTVIGTPFWMAPEVIQ 172

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 40.8 bits (95), Expect = 2e-05
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)

Query: 14  KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K  PL   YI  IL ++L  L  L     IH D+K  N++L     +   VK+ DFG A 
Sbjct: 94  KPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLL----SEQGDVKLADFGVAG 149

Query: 74  HVSKAVC--NTYLQSRYYRAPEII 95
            ++      NT++ + ++ APE+I
Sbjct: 150 QLTDTQIKRNTFVGTPFWMAPEVI 173

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 9/98 (9%)

Query: 3   EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY 62
           EQ+L   L  N  +P     ++ ++ Q+L  L  L +  +IH DLK  N++L D      
Sbjct: 91  EQDLASLL-DNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTD----KG 145

Query: 63  RVKVIDFGSA---SHVSKAVCNTYLQSRYYRAPEIILG 97
            +K+ DFG A      +K +    + + +YRAPE++LG
Sbjct: 146 CLKIADFGLARTYGLPAKPMTPKVV-TLWYRAPELLLG 182

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 8/90 (8%)

Query: 7   YDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKV 66
           Y   ++ KFS    + ++  + +++ AL  L   G+IH D+KP+NI+L +   Q + V +
Sbjct: 89  YHLSQKVKFSE---EQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDE---QGH-VHI 141

Query: 67  IDFGSASHVSKAVCNT-YLQSRYYRAPEII 95
            DF  A+ V+     T    +  Y APE++
Sbjct: 142 TDFNIATKVTPDTLTTSTSGTPGYMAPEVL 171

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 19/51 (37%), Positives = 28/51 (54%)

Query: 4   QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIML 54
             L+  L++     L  +  R    +VL AL  L  LG+++ DLKPENI+L
Sbjct: 86  GELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILL 136

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 40.6 bits (95), Expect = 2e-05
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)

Query: 23  IRPILHQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN 81
           +R I + V+  L  LK +  +IH D+KP N++    V    +VK+ DFG + ++  ++  
Sbjct: 104 LRRITYAVVKGLKFLKEEHNIIHRDVKPTNVL----VNGNGQVKLCDFGVSGNLVASLAK 159

Query: 82  TYLQSRYYRAPEIILGE 98
           T +  + Y APE I   
Sbjct: 160 TNIGCQSYMAPERIKSG 176

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%)

Query: 13  NKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA 72
           +K   L    I+  +   L  L  L    ++H DLKP N+ L+        +K+ DFG A
Sbjct: 94  DKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNL-LIASDGV---LKLADFGLA 149

Query: 73  -SHVSKAVCNTY-LQSRYYRAPEIILG 97
            S  S     T+ + +R+YRAPE++ G
Sbjct: 150 RSFGSPNRKMTHQVVTRWYRAPELLFG 176

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 40.6 bits (95), Expect = 3e-05
 Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 16  SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA 72
            PLPL+    I  ++L AL  L   G+IH D+K ENI L     +P    + DFG+A
Sbjct: 180 GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL----DEPENAVLGDFGAA 232

Length = 392

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 39.7 bits (93), Expect = 3e-05
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)

Query: 14  KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           + S    + I   L ++L  L +L  L L H DL P NI+ VD  +      +ID+  A 
Sbjct: 82  EVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNIL-VDDGKILG---IIDWEYAG 137

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 12/96 (12%)

Query: 10  LKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLV-DPVRQPYRVKVID 68
           L  NK     L  I+ ++  +L  L  + +  ++H D+K  NI++  D +     +K+ D
Sbjct: 108 LLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGI-----LKLAD 162

Query: 69  FG-----SASHVSKAVCNT-YLQSRYYRAPEIILGE 98
           FG     S S  SK    T  + + +YR PE++LGE
Sbjct: 163 FGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGE 198

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 40.1 bits (94), Expect = 4e-05
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 11/99 (11%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           ++E +L+  +K N    L  ++ +  L+Q+L AL  +    + H DLKP+NI+       
Sbjct: 85  LMESDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNIL----ANA 138

Query: 61  PYRVKVIDFGSA----SHVSKAVCNT-YLQSRYYRAPEI 94
             ++K+ DFG A    +    A+  T Y+ +R+YRAPE+
Sbjct: 139 DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL 177

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 40.2 bits (94), Expect = 4e-05
 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 4/94 (4%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L +++++   S L    I     Q+L AL  +    ++H DLK +NI+L    +    VK
Sbjct: 86  LAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILL---DKHKMVVK 142

Query: 66  VIDFG-SASHVSKAVCNTYLQSRYYRAPEIILGE 98
           + DFG S    SK+   T + +  Y +PE+  G+
Sbjct: 143 IGDFGISKILSSKSKAYTVVGTPCYISPELCEGK 176

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 40.0 bits (93), Expect = 4e-05
 Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 6/78 (7%)

Query: 23  IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-- 80
           I+ I  Q+L AL  L  + +IH DLK  N++L         +K+ DFG ++   K +   
Sbjct: 112 IQVICRQMLEALQYLHSMKIIHRDLKAGNVLLT----LDGDIKLADFGVSAKNVKTLQRR 167

Query: 81  NTYLQSRYYRAPEIILGE 98
           ++++ + Y+ APE+++ E
Sbjct: 168 DSFIGTPYWMAPEVVMCE 185

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 39.8 bits (93), Expect = 5e-05
 Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 7/76 (9%)

Query: 23  IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS---KAV 79
            +  L +++ A+  + Q+G +H D+KPEN+ L+D   +   +K+ DFGSA+ ++      
Sbjct: 104 AQFYLAELVLAIHSVHQMGYVHRDIKPENV-LID---RTGHIKLADFGSAARLTANKMVN 159

Query: 80  CNTYLQSRYYRAPEII 95
               + +  Y APE++
Sbjct: 160 SKLPVGTPDYIAPEVL 175

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 39.8 bits (93), Expect = 5e-05
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS-KAVCNTYLQSR 87
           Q++  L  L Q  +++ DLKPEN++L D       V++ D G A  +           + 
Sbjct: 103 QIICGLEHLHQRRIVYRDLKPENVLLDD----HGNVRISDLGLAVELKGGKKIKGRAGTP 158

Query: 88  YYRAPEIILGE 98
            Y APE++ GE
Sbjct: 159 GYMAPEVLQGE 169

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 39.8 bits (93), Expect = 5e-05
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 7/81 (8%)

Query: 20  LKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV 79
            + I+  L+Q+L  +       ++H DLKP+N +L+D  R+   +K+ DFG A      V
Sbjct: 101 PRLIKTYLYQILRGIAYCHSHRVLHRDLKPQN-LLID--RRTNALKLADFGLARAFGIPV 157

Query: 80  CNTYLQ---SRYYRAPEIILG 97
             T+     + +YRAPEI+LG
Sbjct: 158 -RTFTHEVVTLWYRAPEILLG 177

Length = 294

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 40.0 bits (94), Expect = 5e-05
 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           L+ +L  ++  +  + L    I+  L+Q+L  +       ++H DLKP+N+ L+D   + 
Sbjct: 80  LDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNL-LID---RE 135

Query: 62  YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
             +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 136 GALKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 173

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 39.7 bits (93), Expect = 6e-05
 Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 8/92 (8%)

Query: 8   DFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI 67
           D L + ++  +  + ++  L+Q+L  +L      ++H DLKP+N +L+D       +K+ 
Sbjct: 90  DSLPKGQY--MDAELVKSYLYQILQGILFCHSRRVLHRDLKPQN-LLID---NKGVIKLA 143

Query: 68  DFG--SASHVSKAVCNTYLQSRYYRAPEIILG 97
           DFG   A  +   V    + + +YRAPE++LG
Sbjct: 144 DFGLARAFGIPVRVYTHEVVTLWYRAPEVLLG 175

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 39.7 bits (93), Expect = 6e-05
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)

Query: 27  LHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA--SHVSKAVCNTYL 84
           L+Q+L  L  +    ++H DLKP N++L         +K+ DFG A  +         Y+
Sbjct: 114 LYQLLRGLKYIHSANVLHRDLKPSNLLL----NANCDLKICDFGLARTTSEKGDFMTEYV 169

Query: 85  QSRYYRAPEIIL 96
            +R+YRAPE++L
Sbjct: 170 VTRWYRAPELLL 181

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 39.5 bits (92), Expect = 6e-05
 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 9/78 (11%)

Query: 27  LHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT---- 82
             Q+L  L  L +  +IH D+K  N+ L+D   Q  R+++ DFG+A+ ++          
Sbjct: 109 TEQLLRGLSYLHENQIIHRDVKGANL-LIDSTGQ--RLRIADFGAAARLAAKGTGAGEFQ 165

Query: 83  --YLQSRYYRAPEIILGE 98
              L +  + APE++ GE
Sbjct: 166 GQLLGTIAFMAPEVLRGE 183

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 39.6 bits (92), Expect = 6e-05
 Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 7/81 (8%)

Query: 18  LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           +P K+ +    +V+ AL  +  +GLIH D+KP+N ML+D   +   +K+ DFG+   + +
Sbjct: 139 VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDN-MLLD---KHGHLKLADFGTCMKMDE 194

Query: 78  A---VCNTYLQSRYYRAPEII 95
                C+T + +  Y +PE++
Sbjct: 195 TGMVRCDTAVGTPDYISPEVL 215

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 39.4 bits (92), Expect = 6e-05
 Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 7/84 (8%)

Query: 18  LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           +P K+ R    +V+ AL  +  +G IH D+KP+N ML+D   +   +K+ DFG+   +  
Sbjct: 139 IPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN-MLLD---KSGHLKLADFGTCMKMDA 194

Query: 78  ---AVCNTYLQSRYYRAPEIILGE 98
                C+T + +  Y +PE++  +
Sbjct: 195 NGMVRCDTAVGTPDYISPEVLKSQ 218

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 39.6 bits (92), Expect = 7e-05
 Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 6/84 (7%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
           PL    IR +  Q L AL  L +  +IH DLK  NI+          +K+ DFG ++  +
Sbjct: 99  PLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFT----LDGDIKLADFGVSAKNT 154

Query: 77  KAVC--NTYLQSRYYRAPEIILGE 98
           + +   ++++ + Y+ APE+++ E
Sbjct: 155 RTIQRRDSFIGTPYWMAPEVVMCE 178

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 39.4 bits (92), Expect = 7e-05
 Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 14/75 (18%)

Query: 27  LHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG----SASHVSKA--VC 80
           L ++  AL  L  LG+I+ DLKPENI+L     +   +K+ DFG    S  H  KA   C
Sbjct: 104 LAELALALDHLHSLGIIYRDLKPENILL----DEEGHIKLTDFGLSKESIDHEKKAYSFC 159

Query: 81  NTYLQSRYYRAPEII 95
            T      Y APE++
Sbjct: 160 GTV----EYMAPEVV 170

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|216618 pfam01636, APH, Phosphotransferase enzyme family

 Score = 39.5 bits (92), Expect = 7e-05
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%)

Query: 27  LHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH 74
           L   L ALL    L L+H DL P N+++    R      VIDF  A  
Sbjct: 152 LLAALLALLPALPLVLVHGDLHPGNLLVDPGGRV---TGVIDFEDAGL 196

This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881. Length = 238

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 39.2 bits (91), Expect = 7e-05
 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)

Query: 23  IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN- 81
           I  +   VL AL  L   G+IH D+K ++I+L        RVK+ DFG  + +SK V   
Sbjct: 119 IATVCESVLQALCYLHSQGVIHRDIKSDSILLT----LDGRVKLSDFGFCAQISKDVPKR 174

Query: 82  -TYLQSRYYRAPEII 95
            + + + Y+ APE+I
Sbjct: 175 KSLVGTPYWMAPEVI 189

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 39.1 bits (91), Expect = 1e-04
 Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 5/68 (7%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +LY +L +    PLP+     I  Q+L  L  L    +IH D+K ENI  ++ V Q   V
Sbjct: 142 DLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENI-FINDVDQ---V 196

Query: 65  KVIDFGSA 72
            + D G+A
Sbjct: 197 CIGDLGAA 204

Length = 357

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 38.8 bits (90), Expect = 1e-04
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 8/92 (8%)

Query: 9   FLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVID 68
           FLK+ +    P+  I  ILH+ L  L  L     IH D+K  NI+L         VK++D
Sbjct: 114 FLKRGERMEEPI--IAYILHEALMGLQHLHVNKTIHRDVKGNNILLT----TEGGVKLVD 167

Query: 69  FGSASHVSKAVC--NTYLQSRYYRAPEIILGE 98
           FG ++ ++      NT + + ++ APE+I  E
Sbjct: 168 FGVSAQLTSTRLRRNTSVGTPFWMAPEVIACE 199

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 38.6 bits (90), Expect = 1e-04
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 6/75 (8%)

Query: 23  IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-- 80
           I  +   VL AL  L   G+IH D+K ++I+L        RVK+ DFG  + VSK V   
Sbjct: 117 IATVCLAVLKALSFLHAQGVIHRDIKSDSILLT----SDGRVKLSDFGFCAQVSKEVPRR 172

Query: 81  NTYLQSRYYRAPEII 95
            + + + Y+ APE+I
Sbjct: 173 KSLVGTPYWMAPEVI 187

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 38.9 bits (90), Expect = 1e-04
 Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 6/68 (8%)

Query: 30  VLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTYLQSR 87
           VL AL  L   G+IH D+K ++I+L        RVK+ DFG  + VSK V    + + + 
Sbjct: 125 VLKALSVLHAQGVIHRDIKSDSILLT----HDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 180

Query: 88  YYRAPEII 95
           Y+ APE+I
Sbjct: 181 YWMAPELI 188

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 38.6 bits (90), Expect = 1e-04
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 11/70 (15%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK---AVCNTYLQ 85
           +++ A   L    +I+ DLKPEN++L         VKV DFG A  V      +C T   
Sbjct: 126 ELVLAFEYLHSKDIIYRDLKPENLLL----DNKGHVKVTDFGFAKKVPDRTFTLCGT--- 178

Query: 86  SRYYRAPEII 95
              Y APE+I
Sbjct: 179 -PEYLAPEVI 187

Length = 329

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 38.7 bits (90), Expect = 1e-04
 Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 8/70 (11%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH----VSKAVCNTYL 84
           QVL A+  +    +IH D+K  NI+L         VK+ DFG +      VS  V  T+ 
Sbjct: 151 QVLLAVHHVHSKHMIHRDIKSANILLC----SNGLVKLGDFGFSKMYAATVSDDVGRTFC 206

Query: 85  QSRYYRAPEI 94
            + YY APEI
Sbjct: 207 GTPYYVAPEI 216

Length = 496

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 38.6 bits (90), Expect = 1e-04
 Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 6/95 (6%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            LYD + + K      + +   L Q+++A+  + + G++H D+K  NI L     +   +
Sbjct: 85  TLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT----KAGLI 140

Query: 65  KVIDFGSASHVS--KAVCNTYLQSRYYRAPEIILG 97
           K+ DFG +  +    ++  T + + YY +PE+  G
Sbjct: 141 KLGDFGISKILGSEYSMAETVVGTPYYMSPELCQG 175

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 38.5 bits (89), Expect = 1e-04
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 6/68 (8%)

Query: 30  VLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTYLQSR 87
           VL AL  L   G+IH D+K ++I+L        R+K+ DFG  + VSK V    + + + 
Sbjct: 127 VLRALSYLHNQGVIHRDIKSDSILLT----SDGRIKLSDFGFCAQVSKEVPKRKSLVGTP 182

Query: 88  YYRAPEII 95
           Y+ APE+I
Sbjct: 183 YWMAPEVI 190

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 38.1 bits (88), Expect = 2e-04
 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 6/77 (7%)

Query: 23  IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG--SASHVSKAVC 80
           ++  L Q+L  L  + Q  ++H DLKP+N+++ D       +K+ DFG   A  V     
Sbjct: 105 VKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISD----TGELKLADFGLARAKSVPSHTY 160

Query: 81  NTYLQSRYYRAPEIILG 97
           +  + + +YR P+++LG
Sbjct: 161 SNEVVTLWYRPPDVLLG 177

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 10/99 (10%)

Query: 5   NLYDFLKQNKFS--PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY 62
           +L   +K+ K    P P + I     Q+  AL  L    ++H D+KP+NI L        
Sbjct: 85  DLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFL----TSNG 140

Query: 63  RVKVIDFGSA---SHVSKAVCNTYLQSRYYRAPEIILGE 98
            VK+ DFG +   S  +  +  T + + YY +PE+   +
Sbjct: 141 LVKLGDFGISKVLSS-TVDLAKTVVGTPYYLSPELCQNK 178

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 38.0 bits (88), Expect = 2e-04
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 6/72 (8%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSK-AVCNTYLQS 86
           +++ AL  L +  +++ DLKPENI+L         + + DFG S ++++     NT+  +
Sbjct: 104 ELVLALEHLHKYDIVYRDLKPENILL----DATGHIALCDFGLSKANLTDNKTTNTFCGT 159

Query: 87  RYYRAPEIILGE 98
             Y APE++L E
Sbjct: 160 TEYLAPEVLLDE 171

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 37.9 bits (88), Expect = 2e-04
 Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 8/77 (10%)

Query: 23  IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---V 79
           +R    QVL  L  L   G++H DLK +N+ LVD        K+ DFG +          
Sbjct: 110 VRFFTEQVLEGLAYLHSKGILHRDLKADNL-LVD---ADGICKISDFGISKKSDDIYDND 165

Query: 80  CNTYLQ-SRYYRAPEII 95
            N  +Q S ++ APE+I
Sbjct: 166 QNMSMQGSVFWMAPEVI 182

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|218977 pfam06293, Kdo, Lipopolysaccharide kinase (Kdo/WaaP) family

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)

Query: 4   QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
           Q+L  +L Q       L+  R +   V   + ++ + G+ H DL   NI L+D     ++
Sbjct: 103 QDLVTWLAQWADPAEELR--RALWRAVGRLIARMHRAGVNHTDLNAHNI-LLDTGEGGFK 159

Query: 64  VKVIDF 69
           V +IDF
Sbjct: 160 VWLIDF 165

These lipopolysaccharide kinases are related to protein kinases pfam00069. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of S. enterica. Length = 206

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 37.9 bits (88), Expect = 3e-04
 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 12/78 (15%)

Query: 26  ILHQVLTALLKL-KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYL 84
           I  Q++ AL  L K+  ++H DL P NIML +      +V + DFG A         + L
Sbjct: 118 IFVQMVLALRYLHKEKRIVHRDLTPNNIMLGE----DDKVTITDFGLAKQKQP---ESKL 170

Query: 85  QSR----YYRAPEIILGE 98
            S      Y  PEI+  E
Sbjct: 171 TSVVGTILYSCPEIVKNE 188

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 37.5 bits (87), Expect = 3e-04
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 6/92 (6%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L+  LK  +  PLP   +     Q+L  L  L    ++H D+K  N+ L         V
Sbjct: 85  DLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFL----DAYDNV 140

Query: 65  KVIDFGSASHVSKA--VCNTYLQSRYYRAPEI 94
           K+ D G A  +S      NT + + YY +PE+
Sbjct: 141 KIGDLGVAKLLSDNTNFANTIVGTPYYLSPEL 172

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 37.8 bits (88), Expect = 3e-04
 Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 5/81 (6%)

Query: 18  LPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
           +P   +  I   VL  L  L++   ++H D+KP NI+    V     +K+ DFG +  + 
Sbjct: 96  IPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNIL----VNSRGEIKLCDFGVSGQLI 151

Query: 77  KAVCNTYLQSRYYRAPEIILG 97
            ++ N+++ +R Y +PE + G
Sbjct: 152 DSMANSFVGTRSYMSPERLQG 172

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 37.4 bits (87), Expect = 3e-04
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 11/70 (15%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK---AVCNTYLQ 85
           +++ AL  L    +++ DLKPENI+L     +   +K+ DFG A  +      +C T   
Sbjct: 109 EIVCALEYLHSKEIVYRDLKPENILL----DKEGHIKLTDFGFAKKLRDRTWTLCGT--- 161

Query: 86  SRYYRAPEII 95
              Y APE+I
Sbjct: 162 -PEYLAPEVI 170

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 37.7 bits (87), Expect = 3e-04
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 6/80 (7%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
           PL    I  +  + L  L  L   G +H D+K  NI+L D       VK+ DFG ++ ++
Sbjct: 102 PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTD----NGHVKLADFGVSAQIT 157

Query: 77  KAVC--NTYLQSRYYRAPEI 94
             +    +++ + Y+ APE+
Sbjct: 158 ATIAKRKSFIGTPYWMAPEV 177

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 4/41 (9%)

Query: 33  ALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           AL  + +LG IH D+KP+NI L+D       +K+ DFG   
Sbjct: 113 ALDSVHKLGFIHRDIKPDNI-LID---ADGHIKLADFGLCK 149

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 37.4 bits (87), Expect = 4e-04
 Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 16/101 (15%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           +LE  L  F + +         I+  + Q+L  L    +   +H D+K  NI+L      
Sbjct: 105 LLESGLVHFSEDH---------IKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL----NN 151

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILGE 98
             ++K+ DFG A   +      Y     + +YR PE++LGE
Sbjct: 152 KGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGE 192

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 37.1 bits (86), Expect = 4e-04
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 12/91 (13%)

Query: 13  NKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA 72
           N +       +R  + Q+L  L  L   G+IH D+K  NI LVD       +K+ DFG +
Sbjct: 98  NNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANI-LVD---NKGGIKISDFGIS 153

Query: 73  SHVSKAVCNTYLQ--------SRYYRAPEII 95
             +     +T           S ++ APE++
Sbjct: 154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVV 184

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 4/56 (7%)

Query: 42  LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           ++H D+KP NI+    V     +K+ DFG +  +  ++ N+++ +R Y +PE + G
Sbjct: 125 IMHRDVKPSNIL----VNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG 176

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 37.2 bits (87), Expect = 5e-04
 Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 9/100 (9%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           +E +L   ++  K  P     ++ ++ Q+L+ +  L    ++H DLK  N++L       
Sbjct: 88  VEHDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL----NNR 142

Query: 62  YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILGE 98
             +K+ DFG A     +    Y Q   + +YRAPE++LG 
Sbjct: 143 GILKICDFGLAREYG-SPLKPYTQLVVTLWYRAPELLLGA 181

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 36.8 bits (85), Expect = 5e-04
 Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +LY +L   +  PL L  +  +  Q+L+A+  +   G+IH D+K EN++    V  P  +
Sbjct: 245 DLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVL----VNGPEDI 299

Query: 65  KVIDFGSA 72
            + DFG+A
Sbjct: 300 CLGDFGAA 307

Length = 461

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 37.0 bits (86), Expect = 5e-04
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 6/93 (6%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYR 63
             Y ++ +   S +P + +  I    + AL  LK+ L +IH D+KP NI+L     +   
Sbjct: 91  KFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL----DRNGN 146

Query: 64  VKVIDFGSASHVSKAVCNTY-LQSRYYRAPEII 95
           +K+ DFG +  +  ++  T     R Y APE I
Sbjct: 147 IKLCDFGISGQLVDSIAKTRDAGCRPYMAPERI 179

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 36.6 bits (85), Expect = 6e-04
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 10/98 (10%)

Query: 6   LYDFLKQNKFSP---LPLKYIRPILHQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQP 61
           L  F K+  +     +P   +  I   ++ AL  L  +L +IH D+KP N+ L++   Q 
Sbjct: 86  LDKFYKK-VYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNV-LINRNGQ- 142

Query: 62  YRVKVIDFGSASHVSKAVCNTY-LQSRYYRAPEIILGE 98
             VK+ DFG + ++  +V  T     + Y APE I  E
Sbjct: 143 --VKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPE 178

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 36.7 bits (85), Expect = 6e-04
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 20/92 (21%)

Query: 22  YIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS------HV 75
            ++ IL Q+L  L  L +   +H DL P NI +          K+ DFG A       + 
Sbjct: 120 QVKCILLQILNGLNVLHKWYFMHRDLSPANIFINS----KGICKIADFGLARRYGYPPYS 175

Query: 76  SKAVCNTYLQSR----------YYRAPEIILG 97
                +  +Q R          +YRAPE+++G
Sbjct: 176 DTLSKDETMQRREEMTSKVVTLWYRAPELLMG 207

Length = 335

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 5/70 (7%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L+D LK+     L    ++ I+ Q++ AL  L +  +IH D+K EN++     R   R+ 
Sbjct: 96  LFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLY---DRAKDRIY 150

Query: 66  VIDFGSASHV 75
           + D+G    +
Sbjct: 151 LCDYGLCKII 160

Length = 267

>gnl|CDD|240158 cd05119, RIO, RIO kinase family, catalytic domain

 Score = 36.3 bits (85), Expect = 7e-04
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 12/72 (16%)

Query: 8   DFLKQNKFSPLPLKYIRP------ILHQVLTALLKL-KQLGLIHADLKPENIMLVDPVRQ 60
           +F+  +      LK +R       +  Q+L  + KL ++ GL+H DL   NI++ D   +
Sbjct: 95  EFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVDD--GK 152

Query: 61  PYRVKVIDFGSA 72
            Y   +ID   A
Sbjct: 153 VY---IIDVPQA 161

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They function as non-ribosomal factors necessary for late 18S rRNA processing. RIO1 is also required for proper cell cycle progression and chromosome maintenance. The biological substrates for RIO kinases are still unknown. Length = 187

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 36.5 bits (84), Expect = 8e-04
 Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 6/77 (7%)

Query: 23  IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG--SASHVSKAVC 80
           ++  L+Q+L  L    +  ++H DLKP+N++    + +   +K+ DFG   A  V     
Sbjct: 106 VKIFLYQILRGLAYCHRRKVLHRDLKPQNLL----INERGELKLADFGLARAKSVPTKTY 161

Query: 81  NTYLQSRYYRAPEIILG 97
           +  + + +YR P+++LG
Sbjct: 162 SNEVVTLWYRPPDVLLG 178

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 36.6 bits (84), Expect = 8e-04
 Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 4/56 (7%)

Query: 42  LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           ++H D+KP NI+    V     +K+ DFG +  +  ++ N+++ +R Y +PE + G
Sbjct: 125 IMHRDVKPSNIL----VNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG 176

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 36.4 bits (84), Expect = 8e-04
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT--YLQS 86
           Q+++ L  L Q  +I+ DLKPEN++L +       V++ D G A  +      T  Y  +
Sbjct: 105 QIISGLEHLHQRRIIYRDLKPENVLLDN----DGNVRISDLGLAVELKDGQSKTKGYAGT 160

Query: 87  RYYRAPEIILGE 98
             + APE++ GE
Sbjct: 161 PGFMAPELLQGE 172

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 36.3 bits (84), Expect = 0.001
 Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 6/69 (8%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--CNTYLQS 86
           Q+L+ +  L +  ++H D+KP N +L++  +    VK+ DFG +  +++ +  CN+ + +
Sbjct: 176 QILSGIAYLHRRHIVHRDIKPSN-LLINSAK---NVKIADFGVSRILAQTMDPCNSSVGT 231

Query: 87  RYYRAPEII 95
             Y +PE I
Sbjct: 232 IAYMSPERI 240

Length = 353

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 36.3 bits (84), Expect = 0.001
 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 6/72 (8%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH--VSKAVCNTYLQS 86
           +++  L  L + G+I+ DLK +N++L     +   +K+ DFG        +   +T+  +
Sbjct: 104 EIICGLQFLHKKGIIYRDLKLDNVLL----DKDGHIKIADFGMCKENMNGEGKASTFCGT 159

Query: 87  RYYRAPEIILGE 98
             Y APEI+ G+
Sbjct: 160 PDYIAPEILKGQ 171

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 36.2 bits (84), Expect = 0.001
 Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 18/96 (18%)

Query: 8   DFLKQNKFSPLPLKYIRPILHQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKV 66
           D L +    P+P   +  +   ++ AL  LK+  G+IH D+KP NI L+D       VK+
Sbjct: 101 DKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNI-LLDASGN---VKL 156

Query: 67  IDFG-------SASHVSKAVCNTYLQSRYYRAPEII 95
            DFG       S +    A C  Y+      APE I
Sbjct: 157 CDFGISGRLVDSKAKTRSAGCAAYM------APERI 186

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 35.8 bits (83), Expect = 0.001
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 12/69 (17%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILH----QVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           L D L+++      +      L     Q+   +  L+    IH DL   NI+L       
Sbjct: 82  LLDRLRKDALGHFLI----STLCDYAVQIANGMRYLESKRFIHRDLAARNILLA----SD 133

Query: 62  YRVKVIDFG 70
            +VK+ DFG
Sbjct: 134 DKVKIGDFG 142

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 6/71 (8%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG--SASHVSKAVCNTYLQS 86
           ++L AL  L +  +I+ DLKPENI+L         + + DFG    +       NT+  +
Sbjct: 101 ELLCALENLHKFNVIYRDLKPENILL----DYQGHIALCDFGLCKLNMKDDDKTNTFCGT 156

Query: 87  RYYRAPEIILG 97
             Y APE++LG
Sbjct: 157 PEYLAPELLLG 167

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 35.7 bits (82), Expect = 0.001
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)

Query: 23  IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-- 80
           I  IL+  L  L  L    +IH D+K  NI+L         VK++DFG ++ ++      
Sbjct: 130 ISYILYGALLGLQHLHNNRIIHRDVKGNNILLT----TEGGVKLVDFGVSAQLTSTRLRR 185

Query: 81  NTYLQSRYYRAPEIILGE 98
           NT + + ++ APE+I  E
Sbjct: 186 NTSVGTPFWMAPEVIACE 203

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|233667 TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase

 Score = 35.7 bits (83), Expect = 0.001
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 19/75 (25%)

Query: 23  IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT 82
            R  L+QVL       + G  HADL P NI     V +  ++  +DFG    +S+     
Sbjct: 266 ARSFLNQVL-------RDGFFHADLHPGNIF----VLKDGKIIALDFGIVGRLSE----- 309

Query: 83  YLQSRYYRAPEIILG 97
             + R Y A EI+ G
Sbjct: 310 --EDRRYLA-EILYG 321

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol -> 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 437

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 35.8 bits (82), Expect = 0.001
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 6/80 (7%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
           PL    I  +  + L  L  L   G +H D+K  NI+L D       VK+ DFG A+ ++
Sbjct: 102 PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTD----NGDVKLADFGVAAKIT 157

Query: 77  KAVC--NTYLQSRYYRAPEI 94
             +    +++ + Y+ APE+
Sbjct: 158 ATIAKRKSFIGTPYWMAPEV 177

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 35.9 bits (83), Expect = 0.001
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 7/78 (8%)

Query: 23  IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV---SKAV 79
           +R  + +++ AL  L QLG+I+ D+K ENI+L         V + DFG +       +  
Sbjct: 107 VRVYIAEIVLALDHLHQLGIIYRDIKLENILL----DSEGHVVLTDFGLSKEFLAEEEER 162

Query: 80  CNTYLQSRYYRAPEIILG 97
             ++  +  Y APE+I G
Sbjct: 163 AYSFCGTIEYMAPEVIRG 180

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 35.4 bits (82), Expect = 0.002
 Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 21/100 (21%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L  +LK+     +P+  ++ + HQV   +  L+    +H DL   N++LV+     ++ K
Sbjct: 82  LLKYLKKR--REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVN----RHQAK 135

Query: 66  VIDFGSASHVSKAV--CNTYLQS--------RYYRAPEII 95
           + DFG    +S+A+   + Y ++        ++Y APE I
Sbjct: 136 ISDFG----MSRALGAGSDYYRATTAGRWPLKWY-APECI 170

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 35.3 bits (81), Expect = 0.002
 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 6/72 (8%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG--SASHVSKAVCNTYLQS 86
           +++  L  L   G+++ DLK +NI+L         +K+ DFG    + +  A   T+  +
Sbjct: 104 EIICGLQFLHSKGIVYRDLKLDNILL----DTDGHIKIADFGMCKENMLGDAKTCTFCGT 159

Query: 87  RYYRAPEIILGE 98
             Y APEI+LG+
Sbjct: 160 PDYIAPEILLGQ 171

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|240168 cd05145, RIO1_like, RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

 Score = 35.2 bits (82), Expect = 0.002
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 6/57 (10%)

Query: 17  PLPLKYIRPILHQVLTALLKL-KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA 72
           PL  +    +  QV+  + +L ++ GL+H DL   NI+  D   +PY   +ID   A
Sbjct: 113 PLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYHD--GKPY---IIDVSQA 164

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and chromosome maintenance. The biological substrates for RIO1 are unknown. The function of RIO3 is also unknown. Length = 190

>gnl|CDD|240167 cd05144, RIO2_C, RIO kinase family; RIO2, C-terminal catalytic domain

 Score = 35.2 bits (82), Expect = 0.002
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 4/44 (9%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF 69
           +L ++L  ++K  + G+IH DL   NI+ VD   + Y   +ID+
Sbjct: 130 VLDEILEEIVKAYKHGIIHGDLSEFNIL-VDDDEKIY---IIDW 169

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH domains may be involved in RNA recognition. RIO2 is essential for survival and is necessary for rRNA cleavage during 40S ribosomal subunit maturation. The biological substrates of RIO2 are still unknown. Length = 198

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 6/81 (7%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
           PL    I  IL ++L  L  L     IH D+K  N++L     +   VK+ DFG A  ++
Sbjct: 97  PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL----SEHGEVKLADFGVAGQLT 152

Query: 77  KAVC--NTYLQSRYYRAPEII 95
                 NT++ + ++ APE+I
Sbjct: 153 DTQIKRNTFVGTPFWMAPEVI 173

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 35.3 bits (81), Expect = 0.002
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 13/86 (15%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L  FL++NK   +  K I  ++HQV   +  L++   +H DL   N++LV    Q Y  K
Sbjct: 82  LNKFLQKNKH--VTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVT---QHY-AK 135

Query: 66  VIDFGSASHVSKAVCNTYLQSRYYRA 91
           + DFG    +SKA+        YY+A
Sbjct: 136 ISDFG----LSKALGA---DENYYKA 154

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 5/81 (6%)

Query: 14  KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           KF  +P + ++    +++ AL  L + G++  DL P NI+L         +++  F   S
Sbjct: 78  KFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILL----DDRGHIQLTYFSRWS 133

Query: 74  HVSKAVCNTYLQSRYYRAPEI 94
            V  +     +    Y APE+
Sbjct: 134 EVEDSCDGEAV-ENMYCAPEV 153

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 34.9 bits (80), Expect = 0.002
 Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 10/79 (12%)

Query: 23  IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-CN 81
           +R  + Q+L  L  +    ++H DLKP+N++    +     +K+ DFG A   +K++   
Sbjct: 105 VRLFMFQLLRGLAYIHGQHILHRDLKPQNLL----ISYLGELKLADFGLAR--AKSIPSQ 158

Query: 82  TY---LQSRYYRAPEIILG 97
           TY   + + +YR P+++LG
Sbjct: 159 TYSSEVVTLWYRPPDVLLG 177

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 35.0 bits (81), Expect = 0.002
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 17/89 (19%)

Query: 23  IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH-------- 74
           I+  + Q+L  +  L +  ++H D+K  NI L+D       +K+ DFG A          
Sbjct: 117 IKCYMLQLLEGINYLHENHILHRDIKAANI-LIDNQGI---LKIADFGLARPYDGPPPNP 172

Query: 75  -----VSKAVCNTYLQSRYYRAPEIILGE 98
                         + +R+YR PE++LGE
Sbjct: 173 KGGGGGGTRKYTNLVVTRWYRPPELLLGE 201

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 35.0 bits (80), Expect = 0.003
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 9/90 (10%)

Query: 8   DFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI 67
           D L+   F       I  +L ++L  L  L     IH D+K  N++L     +   VK+ 
Sbjct: 91  DLLRAGPFDEFQ---IATMLKEILKGLDYLHSEKKIHRDIKAANVLL----SEQGDVKLA 143

Query: 68  DFGSASHVSKAVC--NTYLQSRYYRAPEII 95
           DFG A  ++      NT++ + ++ APE+I
Sbjct: 144 DFGVAGQLTDTQIKRNTFVGTPFWMAPEVI 173

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 34.8 bits (80), Expect = 0.003
 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 29/101 (28%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------ 70
            LP+   R    + + AL  L   G++H DLKP+N+++         +K+ DFG      
Sbjct: 97  ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLIT----SMGHIKLTDFGLSKIGL 152

Query: 71  ---------------SASHVSKAVCNTYLQSRYYRAPEIIL 96
                          +   + K VC T      Y APE+IL
Sbjct: 153 MSLTTNLYEGHIEKDTREFLDKQVCGT----PEYIAPEVIL 189

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 35.0 bits (80), Expect = 0.003
 Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)

Query: 23  IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG--SASHVSKAVC 80
           ++  L Q+L  L    +  ++H DLKP+N++    + +   +K+ DFG   A  +     
Sbjct: 106 VKLFLFQLLRGLNYCHRRKVLHRDLKPQNLL----INERGELKLADFGLARAKSIPTKTY 161

Query: 81  NTYLQSRYYRAPEIILG 97
           +  + + +YR P+I+LG
Sbjct: 162 SNEVVTLWYRPPDILLG 178

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 34.4 bits (80), Expect = 0.003
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 4/66 (6%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L D+L++N+   L L  +     Q+   +  L+    IH DL   N +    V +   V
Sbjct: 87  DLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCL----VGENLVV 142

Query: 65  KVIDFG 70
           K+ DFG
Sbjct: 143 KISDFG 148

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|218593 pfam05445, Pox_ser-thr_kin, Poxvirus serine/threonine protein kinase

 Score = 34.7 bits (80), Expect = 0.004
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 19/77 (24%)

Query: 11  KQNKFSPLPLKYIRPILHQVLTALLKLKQL----GLIHADLKPENIMLVDPVR------- 59
            +  F     +YI+ I  Q+    +K+ +L      +H DLKP+NI++ D          
Sbjct: 266 AELGFKSNV-EYIKFIFLQIALLYIKIYELPDCTNFLHVDLKPDNILIFDSKEPIIIKFG 324

Query: 60  -------QPYRVKVIDF 69
                  +P R K+ DF
Sbjct: 325 NRNYVFKEPIRSKLNDF 341

Length = 434

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 34.5 bits (79), Expect = 0.004
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 8/54 (14%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG 70
            + +KYI     +V  AL  L + G+IH DLKP+N+++ +       +K+ DFG
Sbjct: 104 EMAVKYIS----EVALALDYLHRHGIIHRDLKPDNMLISN----EGHIKLTDFG 149

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	98
KOG0595|consensus	429		99.93
KOG0616|consensus	355		99.92
KOG0581|consensus	364		99.92
KOG0598|consensus	357		99.92
KOG0583|consensus	370		99.91
KOG0615|consensus	475		99.91
KOG0599|consensus	411		99.9
KOG0575|consensus	592		99.9
KOG0198|consensus	313		99.9
KOG0588|consensus	786		99.9
KOG0661|consensus	538		99.89
KOG0192|consensus	362		99.89
KOG0594|consensus	323		99.88
KOG0611|consensus	668		99.88
KOG0667|consensus	586		99.88
KOG0592|consensus	604		99.88
KOG0986|consensus	591		99.87
KOG0578|consensus	550		99.86
KOG0582|consensus	516		99.86
KOG0591|consensus	375		99.85
KOG0593|consensus	396		99.85
KOG0197|consensus	468		99.85
KOG0584|consensus	632		99.84
KOG0604|consensus	400		99.84
KOG0694|consensus	694		99.84
KOG0600|consensus	560		99.83
KOG0605|consensus	550		99.83
KOG0659|consensus	318		99.83
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.82
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.82
KOG0580|consensus	281		99.82
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.81
KOG0033|consensus	355		99.81
KOG0660|consensus	359		99.81
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.81
KOG1187|consensus	361		99.81
KOG0663|consensus	419		99.81
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.81
KOG0589|consensus	426		99.81
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.81
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.81
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.81
KOG4717|consensus	864		99.81
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.81
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.81
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.8
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.8
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.8
KOG0612|consensus	1317		99.8
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.8
KOG0614|consensus	732		99.8
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.8
KOG0658|consensus	364		99.8
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.8
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.8
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.8
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.8
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.8
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.8
KOG4236|consensus	888		99.8
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.8
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.8
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.8
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.8
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.8
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.79
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.79
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.79
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.79
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.79
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.79
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.79
KOG4279|consensus	1226		99.79
KOG0586|consensus	596		99.79
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.79
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.79
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.79
KOG0597|consensus	808		99.79
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.79
KOG0032|consensus	382		99.79
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.78
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.78
KOG0585|consensus	576		99.78
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.78
KOG3653|consensus	534		99.78
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.78
KOG0193|consensus	678		99.78
PTZ00267	478	NIMA-related protein kinase; Provisional	99.77
KOG4721|consensus	904		99.77
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.77
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.77
KOG0579|consensus	1187		99.77
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.77
PHA03212	391	serine/threonine kinase US3; Provisional	99.77
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.77
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.77
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.77
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.77
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.76
PTZ00283	496	serine/threonine protein kinase; Provisional	99.76
KOG0610|consensus	459		99.76
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.76
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.76
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.76
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.76
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.76
KOG0662|consensus	292		99.76
KOG0577|consensus	948		99.76
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.76
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.76
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.76
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.76
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.75
KOG0201|consensus	467		99.75
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.75
KOG2052|consensus	513		99.75
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.75
KOG0194|consensus	474		99.75
KOG4645|consensus	1509		99.74
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.74
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.74
PHA03207	392	serine/threonine kinase US3; Provisional	99.74
PHA03209	357	serine/threonine kinase US3; Provisional	99.74
KOG4250|consensus	732		99.74
PTZ00036	440	glycogen synthase kinase; Provisional	99.74
PTZ00284	467	protein kinase; Provisional	99.74
KOG0671|consensus	415		99.74
KOG1152|consensus	772		99.74
KOG0690|consensus	516		99.73
KOG1095|consensus	1025		99.73
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.73
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.73
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.73
PHA03211	461	serine/threonine kinase US3; Provisional	99.73
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.72
KOG0666|consensus	438		99.72
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.72
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.72
KOG0984|consensus	282		99.72
KOG0587|consensus	953		99.72
PHA02882	294	putative serine/threonine kinase; Provisional	99.72
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.72
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.72
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.72
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.71
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.71
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.71
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.71
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.71
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.71
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.71
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.71
KOG0664|consensus	449		99.71
KOG0695|consensus	593		99.7
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.7
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.7
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.7
KOG0696|consensus	683		99.7
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.7
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.7
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.7
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.7
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.7
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.7
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.7
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.69
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.69
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.69
PHA03210	501	serine/threonine kinase US3; Provisional	99.69
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.69
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.69
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.69
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.69
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.69
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.69
KOG0196|consensus	996		99.69
PLN00181	793	protein SPA1-RELATED; Provisional	99.69
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.69
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.68
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.68
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.68
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.68
KOG0607|consensus	463		99.68
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.68
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.68
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.68
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.68
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.68
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.68
KOG0574|consensus	502		99.68
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.68
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.68
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.68
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.68
KOG0608|consensus	1034		99.68
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.68
KOG0669|consensus	376		99.67
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.67
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.67
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.67
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.67
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.67
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.67
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.67
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.67
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.67
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.67
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.67
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.67
KOG4278|consensus	1157		99.67
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.67
KOG1027|consensus	903		99.67
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.67
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.67
PHA02988	283	hypothetical protein; Provisional	99.67
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.67
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.67
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.67
KOG1989|consensus	738		99.67
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.67
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.67
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.67
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.67
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.67
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.67
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.66
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.66
KOG1035|consensus	1351		99.66
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.66
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.66
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.66
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.66
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.66
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.66
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.66
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.66
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.66
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.66
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.66
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.66
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.66
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.66
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.66
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.65
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.65
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.65
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.65
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.65
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.65
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.65
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.65
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.65
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.65
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.65
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.65
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.65
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.65
KOG0665|consensus	369		99.65
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.65
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.65
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.65
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.65
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.65
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.64
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.64
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.64
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.64
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.64
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.64
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.64
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.64
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.64
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.64
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.64
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.64
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.64
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.64
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.64
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.64
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.64
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.64
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.64
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.64
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.64
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.64
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.64
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.64
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.64
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.64
KOG0983|consensus	391		99.64
KOG0596|consensus	677		99.64
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.63
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.63
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.63
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.63
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.63
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.63
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.63
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.63
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.63
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.63
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.63
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.63
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.63
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.63
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.63
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.63
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.63
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.63
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.63
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.63
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.62
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.62
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.62
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.62
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.62
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.62
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.62
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.62
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.62
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.62
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.62
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.62
KOG1094|consensus	807		99.62
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.62
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.62
KOG1026|consensus	774		99.62
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.62
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.62
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.62
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.62
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.61
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.61
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.61
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.61
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.61
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.61
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.61
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.61
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.61
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.61
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.61
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.61
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.61
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.61
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.61
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.6
PLN00009	294	cyclin-dependent kinase A; Provisional	99.6
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.6
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.6
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.6
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.6
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.6
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.6
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.6
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.59
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.59
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.59
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.59
KOG1164|consensus	322		99.59
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.59
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.58
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.58
KOG4257|consensus	974		99.58
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.58
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.58
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.58
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.58
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.58
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.57
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.57
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.57
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.57
KOG1165|consensus	449		99.57
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.57
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.57
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.57
KOG1151|consensus	775		99.56
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.56
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.56
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.56
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.55
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.55
KOG0603|consensus	612		99.55
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.54
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.54
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.54
KOG0200|consensus	609		99.53
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.52
KOG0670|consensus	752		99.52
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.51
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.51
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.51
KOG1345|consensus	378		99.49
KOG1006|consensus	361		99.48
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.48
PRK09188	365	serine/threonine protein kinase; Provisional	99.47
KOG2345|consensus	302		99.46
KOG0576|consensus	829		99.46
KOG0199|consensus	1039		99.45
KOG1163|consensus	341		99.44
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.43
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.43
KOG0590|consensus	601		99.42
KOG0668|consensus	338		99.39
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.38
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.38
KOG1025|consensus	1177		99.36
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.33
PRK10345	210	hypothetical protein; Provisional	99.27
KOG1024|consensus	563		99.27
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.26
KOG4158|consensus	598		99.23
KOG1166|consensus	974		99.21
PRK12274	218	serine/threonine protein kinase; Provisional	99.16
smart00090	237	RIO RIO-like kinase.	99.14
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.11
KOG0603|consensus	612		99.04
PRK14879	211	serine/threonine protein kinase; Provisional	99.02
KOG1290|consensus	590		99.02
KOG1033|consensus	516		99.02
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.98
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.95
KOG1167|consensus	418		98.91
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.91
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.87
KOG1240|consensus	1431		98.87
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.8
KOG0606|consensus	1205		98.67
KOG1023|consensus	484		98.65
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.6
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.57
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.5
KOG3087|consensus	229		98.5
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.45
KOG0590|consensus	601		98.41
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.33
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.33
KOG0195|consensus	448		98.28
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.22
PRK09902	216	hypothetical protein; Provisional	98.16
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.09
KOG0601|consensus	524		97.85
KOG1266|consensus	458		97.84
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.79
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.62
COG4248	637	Uncharacterized protein with protein kinase and he	97.62
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.27
KOG3741|consensus	655		96.78
KOG0601|consensus	524		96.65
KOG2137|consensus	700		96.63
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	96.52
KOG1243|consensus	690		96.35
COG0478	304	RIO-like serine/threonine protein kinase fused to	96.12
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	95.74
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	94.99
KOG1235|consensus	538		94.95
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	93.99
PRK05231	319	homoserine kinase; Provisional	93.94
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	93.71
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	93.59
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	93.57
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	93.43
COG3178	351	Predicted phosphotransferase related to Ser/Thr pr	93.05
COG0661	517	AarF Predicted unusual protein kinase [General fun	92.16
COG2334	331	Putative homoserine kinase type II (protein kinase	92.03
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	91.99
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	91.95
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	91.86
PF01636	239	APH: Phosphotransferase enzyme family This family	91.82
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	91.75
KOG1290|consensus	590		91.2
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	91.18
KOG0606|consensus	1205		90.97
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	90.93
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	90.46
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	90.04
KOG2268|consensus	465		89.59
PRK10271	188	thiK thiamine kinase; Provisional	89.25
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	89.08
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	88.97
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	88.91
PRK06149	972	hypothetical protein; Provisional	87.75
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	85.29
PLN02236	344	choline kinase	84.78
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	84.69
PRK06148	1013	hypothetical protein; Provisional	82.0
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	81.69
PRK11768	325	serine/threonine protein kinase; Provisional	80.87

>KOG0595|consensus

Probab=99.93  E-value=2.6e-26  Score=136.17  Aligned_cols=94  Identities=33%  Similarity=0.517  Sum_probs=82.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCC--ccEEEeeecCceeeccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP--YRVKVIDFGSASHVSKA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~--~~~~l~~~g~~~~~~~~   78 (98)
                      +.||||.+|+.+.+  .+++.+++.++.|++.|+++||+++|+|||++|+|+++.......  ..+||+|||+++.+...
T Consensus        91 C~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~  168 (429)
T KOG0595|consen   91 CNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG  168 (429)
T ss_pred             CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch
Confidence            35799999999876  799999999999999999999999999999999999996642222  67899999999987654


Q ss_pred             -ccceecccccccCccccc
Q psy11820         79 -VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~   96 (98)
                       ...+.+|+|.|||||+++
T Consensus       169 ~~a~tlcGSplYMAPEV~~  187 (429)
T KOG0595|consen  169 SMAETLCGSPLYMAPEVIM  187 (429)
T ss_pred             hHHHHhhCCccccCHHHHH
Confidence             457889999999999985

>KOG0616|consensus

Probab=99.92  E-value=4e-25  Score=127.24  Aligned_cols=91  Identities=33%  Similarity=0.444  Sum_probs=83.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.||.|+.+++..+  .++++.+++++.||+.|++|+|+++|++||++|+|+++    +..+.+++.|||++..+... .
T Consensus       126 v~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl----D~~G~iKitDFGFAK~v~~r-T  198 (355)
T KOG0616|consen  126 VPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL----DQNGHIKITDFGFAKRVSGR-T  198 (355)
T ss_pred             cCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee----ccCCcEEEEeccceEEecCc-E
Confidence            36899999999876  89999999999999999999999999999999999999    88999999999999887554 5


Q ss_pred             ceecccccccCcccccCC
Q psy11820         81 NTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~~   98 (98)
                      .+.+|||.|+|||+++.+
T Consensus       199 ~TlCGTPeYLAPEii~sk  216 (355)
T KOG0616|consen  199 WTLCGTPEYLAPEIIQSK  216 (355)
T ss_pred             EEecCCccccChHHhhcC
Confidence            678999999999998753

>KOG0581|consensus

Probab=99.92  E-value=3.5e-25  Score=129.93  Aligned_cols=92  Identities=33%  Similarity=0.511  Sum_probs=84.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~   79 (98)
                      |-+|+|++++...+  .+++..+..++.+++.|+.|||. ++|+|||++|.|+++    ..++.+||+|||.+..+..+.
T Consensus       160 MDgGSLd~~~k~~g--~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv----NskGeVKicDFGVS~~lvnS~  233 (364)
T KOG0581|consen  160 MDGGSLDDILKRVG--RIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV----NSKGEVKICDFGVSGILVNSI  233 (364)
T ss_pred             cCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee----ccCCCEEeccccccHHhhhhh
Confidence            66899999998764  79999999999999999999996 999999999999999    888899999999998887777


Q ss_pred             cceecccccccCcccccCC
Q psy11820         80 CNTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~~   98 (98)
                      +.++.||..|||||.+.|+
T Consensus       234 a~tfvGT~~YMsPERi~g~  252 (364)
T KOG0581|consen  234 ANTFVGTSAYMSPERISGE  252 (364)
T ss_pred             cccccccccccChhhhcCC
Confidence            8899999999999998874

>KOG0598|consensus

Probab=99.92  E-value=5.4e-25  Score=129.02  Aligned_cols=92  Identities=33%  Similarity=0.471  Sum_probs=81.3

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      |.||+|..++.+.+  .+++..+..|+.+|+.|+.|||+.+|+|||++|+||++    +..+.++|.|||++.....  .
T Consensus       107 ~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL----d~~GHi~LtDFgL~k~~~~~~~  180 (357)
T KOG0598|consen  107 LNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL----DEQGHIKLTDFGLCKEDLKDGD  180 (357)
T ss_pred             cCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee----cCCCcEEEeccccchhcccCCC
Confidence            57899999998765  79999999999999999999999999999999999999    8888999999999985422  2


Q ss_pred             ccceecccccccCcccccCC
Q psy11820         79 VCNTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~~   98 (98)
                      ...+++||+.|||||++.++
T Consensus       181 ~t~tfcGT~eYmAPEil~~~  200 (357)
T KOG0598|consen  181 ATRTFCGTPEYMAPEILLGK  200 (357)
T ss_pred             ccccccCCccccChHHHhcC
Confidence            44668999999999998763

>KOG0583|consensus

Probab=99.91  E-value=2e-24  Score=130.00  Aligned_cols=91  Identities=30%  Similarity=0.503  Sum_probs=80.6

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCC-ccEEEeeecCceee-c-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP-YRVKVIDFGSASHV-S-KA   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~-~~~~l~~~g~~~~~-~-~~   78 (98)
                      .+|+|++++...+  .+.+..+..+++|+++|+.|||+++|+|||++++|+++    +.. +.++++|||++... . ..
T Consensus       103 ~gGdL~~~i~~~g--~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENill----d~~~~~~Kl~DFG~s~~~~~~~~  176 (370)
T KOG0583|consen  103 SGGDLFDYIVNKG--RLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILL----DGNEGNLKLSDFGLSAISPGEDG  176 (370)
T ss_pred             CCccHHHHHHHcC--CCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEe----cCCCCCEEEeccccccccCCCCC
Confidence            4789999999844  79999999999999999999999999999999999999    555 79999999999877 2 34


Q ss_pred             ccceecccccccCcccccCC
Q psy11820         79 VCNTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~~   98 (98)
                      ...+.+|++.|+|||++.++
T Consensus       177 ~l~t~cGsp~Y~aPEvl~~~  196 (370)
T KOG0583|consen  177 LLKTFCGSPAYAAPEVLSGK  196 (370)
T ss_pred             cccCCCCCcccCCHHHhCCC
Confidence            56788999999999998763

>KOG0615|consensus

Probab=99.91  E-value=2.6e-24  Score=128.18  Aligned_cols=95  Identities=32%  Similarity=0.465  Sum_probs=81.2

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc-cc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-AV   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~~   79 (98)
                      |.||+|.+++-.++  .+.+..-..+++|++.|+.|||+.||+||||+|+||++... .....+|++|||++...+. +.
T Consensus       258 v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~-~e~~llKItDFGlAK~~g~~sf  334 (475)
T KOG0615|consen  258 VEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSND-AEDCLLKITDFGLAKVSGEGSF  334 (475)
T ss_pred             ecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccC-CcceEEEecccchhhcccccee
Confidence            56899999998776  67777778899999999999999999999999999999442 2347889999999987753 45


Q ss_pred             cceecccccccCcccccCC
Q psy11820         80 CNTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~~   98 (98)
                      ..+.+|||.|.|||++.++
T Consensus       335 m~TlCGTpsYvAPEVl~~k  353 (475)
T KOG0615|consen  335 MKTLCGTPSYVAPEVLASK  353 (475)
T ss_pred             hhhhcCCccccChhheecC
Confidence            6789999999999998753

>KOG0599|consensus

Probab=99.90  E-value=6.3e-24  Score=121.98  Aligned_cols=91  Identities=32%  Similarity=0.480  Sum_probs=81.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      |..|.|+||+...-  +++++....+++|+..|+.|+|.++|+|||+++.||++    +++..++++|||++..+... .
T Consensus       105 ~prGELFDyLts~V--tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl----ddn~~i~isDFGFa~~l~~Gek  178 (411)
T KOG0599|consen  105 MPRGELFDYLTSKV--TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL----DDNMNIKISDFGFACQLEPGEK  178 (411)
T ss_pred             cccchHHHHhhhhe--eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee----ccccceEEeccceeeccCCchh
Confidence            56799999998755  79999999999999999999999999999999999999    78889999999999887654 3


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      ....+|||.|+|||.+..
T Consensus       179 LrelCGTPgYLAPEtikC  196 (411)
T KOG0599|consen  179 LRELCGTPGYLAPETIKC  196 (411)
T ss_pred             HHHhcCCCcccChhheee
Confidence            467789999999998763

>KOG0575|consensus

Probab=99.90  E-value=1.6e-23  Score=129.06  Aligned_cols=91  Identities=34%  Similarity=0.478  Sum_probs=81.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+++|..++++.+  .+++.+++.+++||+.|+.|||+++|+|||++..|+++    +....+||.|||++..+..  .
T Consensus       100 C~~~sL~el~Krrk--~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL----~~~~~VKIgDFGLAt~le~~~E  173 (592)
T KOG0575|consen  100 CHRGSLMELLKRRK--PLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL----NENMNVKIGDFGLATQLEYDGE  173 (592)
T ss_pred             cCCccHHHHHHhcC--CCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee----cCcCcEEecccceeeeecCccc
Confidence            35789999998665  89999999999999999999999999999999999999    7788999999999988763  3


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ...+.+|||.|+|||++..
T Consensus       174 rk~TlCGTPNYIAPEVl~k  192 (592)
T KOG0575|consen  174 RKKTLCGTPNYIAPEVLNK  192 (592)
T ss_pred             ccceecCCCcccChhHhcc
Confidence            4578899999999999864

>KOG0198|consensus

Probab=99.90  E-value=2.6e-23  Score=122.14  Aligned_cols=91  Identities=32%  Similarity=0.444  Sum_probs=79.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCC-CccEEEeeecCceeecc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ-PYRVKVIDFGSASHVSK--   77 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~-~~~~~l~~~g~~~~~~~--   77 (98)
                      +.+|+|.+++...+. .+++..++.+.+|++.|+.|+|+++++|+||++.|+++    +. .+.++|+|||++.....  
T Consensus        98 ~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl----~~~~~~~KlaDFG~a~~~~~~~  172 (313)
T KOG0198|consen   98 APGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILL----DPSNGDVKLADFGLAKKLESKG  172 (313)
T ss_pred             cCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEE----eCCCCeEEeccCcccccccccc
Confidence            468999999998765 79999999999999999999999999999999999999    55 57899999998876542  


Q ss_pred             ---cccceecccccccCccccc
Q psy11820         78 ---AVCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        78 ---~~~~~~~~~~~~~~pe~~~   96 (98)
                         .......||+.|||||++.
T Consensus       173 ~~~~~~~~~~Gtp~~maPEvi~  194 (313)
T KOG0198|consen  173 TKSDSELSVQGTPNYMAPEVIR  194 (313)
T ss_pred             ccccccccccCCccccCchhhc
Confidence               2234567999999999987

>KOG0588|consensus

Probab=99.90  E-value=1.2e-23  Score=131.17  Aligned_cols=92  Identities=33%  Similarity=0.522  Sum_probs=82.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee-cccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV-SKAV   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~~   79 (98)
                      |.+|.|++|+..++  .+++.++..+++||+.|+.|||..+|+|||++++|+++    +....+||+|||.+... ....
T Consensus        94 v~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLL----d~~~nIKIADFGMAsLe~~gkl  167 (786)
T KOG0588|consen   94 VPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLL----DVKNNIKIADFGMASLEVPGKL  167 (786)
T ss_pred             cCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhh----hcccCEeeeccceeecccCCcc
Confidence            56899999998876  89999999999999999999999999999999999999    66667999999998764 4456


Q ss_pred             cceecccccccCcccccCC
Q psy11820         80 CNTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~~   98 (98)
                      ..+.||+|.|.|||+.+|+
T Consensus       168 LeTSCGSPHYA~PEIV~G~  186 (786)
T KOG0588|consen  168 LETSCGSPHYAAPEIVSGR  186 (786)
T ss_pred             ccccCCCcccCCchhhcCC
Confidence            7899999999999999874

>KOG0661|consensus

Probab=99.89  E-value=2.4e-23  Score=125.81  Aligned_cols=91  Identities=36%  Similarity=0.652  Sum_probs=80.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc-ccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-AVC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~~~   80 (98)
                      |+.+|+++++.. ...|+++.++.++.||+.|++|+|++|+.|||++|+|+++    .....+||+|||+++.... ...
T Consensus        92 Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi----~~~~~iKiaDFGLARev~SkpPY  166 (538)
T KOG0661|consen   92 MDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILI----SGNDVIKIADFGLAREVRSKPPY  166 (538)
T ss_pred             hhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEe----cccceeEecccccccccccCCCc
Confidence            577899999877 5689999999999999999999999999999999999999    4456899999999998654 456


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ..+..|.||.|||++..
T Consensus       167 TeYVSTRWYRAPEvLLr  183 (538)
T KOG0661|consen  167 TEYVSTRWYRAPEVLLR  183 (538)
T ss_pred             chhhhcccccchHHhhh
Confidence            77889999999999863

>KOG0192|consensus

Probab=99.89  E-value=7e-23  Score=122.80  Aligned_cols=93  Identities=27%  Similarity=0.379  Sum_probs=79.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CcccCCCCCcEEEecCCCCCc-cEEEeeecCceeeccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLG-LIHADLKPENIMLVDPVRQPY-RVKVIDFGSASHVSKA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-~~h~~l~~~~~~~~~~~~~~~-~~~l~~~g~~~~~~~~   78 (98)
                      |.+|+|.+++.......++...+..++.+|+.|+.|||+++ |+|+|+++.|+++    +... .+||+|||+++.....
T Consensus       122 ~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv----~~~~~~~KI~DFGlsr~~~~~  197 (362)
T KOG0192|consen  122 MPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILV----DLKGKTLKIADFGLSREKVIS  197 (362)
T ss_pred             CCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEE----cCCCCEEEECCCccceeeccc
Confidence            67999999998743457999999999999999999999999 9999999999999    6665 8999999999876542


Q ss_pred             --ccceecccccccCcccccC
Q psy11820         79 --VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~~   97 (98)
                        ......||+.|||||++.+
T Consensus       198 ~~~~~~~~GT~~wMAPEv~~~  218 (362)
T KOG0192|consen  198 KTSMTSVAGTYRWMAPEVLRG  218 (362)
T ss_pred             cccccCCCCCccccChhhhcC
Confidence              2234689999999999874

>KOG0594|consensus

Probab=99.88  E-value=1.2e-22  Score=118.74  Aligned_cols=92  Identities=30%  Similarity=0.570  Sum_probs=77.9

Q ss_pred             chhHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          3 EQNLYDFLKQNKF--SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         3 ~~~L~~~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+|.+|+.....  ..++...++.+++|++.|+.|||+++|+|||++|+|+++    +..+.+|++|||+++..+..  
T Consensus       100 d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi----~~~G~lKlaDFGlAra~~ip~~  175 (323)
T KOG0594|consen  100 DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLI----SSSGVLKLADFGLARAFSIPMR  175 (323)
T ss_pred             cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEE----CCCCcEeeeccchHHHhcCCcc
Confidence            5688899987653  357788999999999999999999999999999999999    66889999999999866532  


Q ss_pred             ccceecccccccCcccccCC
Q psy11820         79 VCNTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~~   98 (98)
                      .......|.||.|||++.|.
T Consensus       176 ~yt~evvTlWYRaPEvLlGs  195 (323)
T KOG0594|consen  176 TYTPEVVTLWYRAPEVLLGS  195 (323)
T ss_pred             cccccEEEeeccCHHHhcCC
Confidence            23556788999999999873

>KOG0611|consensus

Probab=99.88  E-value=8.5e-23  Score=122.63  Aligned_cols=90  Identities=30%  Similarity=0.505  Sum_probs=82.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+|+|+||+.+.+  .|++.+++.+++||++|+.|||+++++|||++..||++    +.++.++|+|||++..+... ..
T Consensus       136 S~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL----D~N~NiKIADFGLSNly~~~kfL  209 (668)
T KOG0611|consen  136 SGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL----DQNNNIKIADFGLSNLYADKKFL  209 (668)
T ss_pred             CCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhccceecccchhheee----cCCCCeeeeccchhhhhccccHH
Confidence            4799999999876  79999999999999999999999999999999999999    88999999999999876543 45


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ++++|+|.|.+||+.-|
T Consensus       210 qTFCGSPLYASPEIvNG  226 (668)
T KOG0611|consen  210 QTFCGSPLYASPEIVNG  226 (668)
T ss_pred             HHhcCCcccCCccccCC
Confidence            88999999999999765

>KOG0667|consensus

Probab=99.88  E-value=2.6e-22  Score=124.33  Aligned_cols=94  Identities=60%  Similarity=0.965  Sum_probs=84.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      |.+.+|+++++.+.+..++.+.++.++.||+.||.+||+.+|||+|++|+||++..+.  +..+|+.|||.+.......+
T Consensus       269 LL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~--r~~vKVIDFGSSc~~~q~vy  346 (586)
T KOG0667|consen  269 LLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPK--RSRIKVIDFGSSCFESQRVY  346 (586)
T ss_pred             hhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCC--cCceeEEecccccccCCcce
Confidence            4678999999999999999999999999999999999999999999999999997644  44899999999877665554


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                       ++..+.+|.|||++.|
T Consensus       347 -tYiQSRfYRAPEVILG  362 (586)
T KOG0667|consen  347 -TYIQSRFYRAPEVILG  362 (586)
T ss_pred             -eeeeccccccchhhcc
Confidence             7888999999999986

>KOG0592|consensus

Probab=99.88  E-value=2.9e-22  Score=122.65  Aligned_cols=90  Identities=32%  Similarity=0.498  Sum_probs=79.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .||+|.+++...+  .|.+..++.|+.+|++|+.|||++||||||++|+||++    +..+.++|.|||.+..+...   
T Consensus       157 ~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL----d~dmhikITDFGsAK~l~~~~~~  230 (604)
T KOG0592|consen  157 PNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL----DKDGHIKITDFGSAKILSPSQKS  230 (604)
T ss_pred             CCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE----cCCCcEEEeeccccccCChhhcc
Confidence            5899999998754  89999999999999999999999999999999999999    88899999999998775321   


Q ss_pred             ------------ccceecccccccCcccccC
Q psy11820         79 ------------VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ------------~~~~~~~~~~~~~pe~~~~   97 (98)
                                  .+.+++||..|.+||++..
T Consensus       231 ~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~  261 (604)
T KOG0592|consen  231 QENPVDPNQASSRRSSFVGTAEYVSPELLND  261 (604)
T ss_pred             ccCccCcccccCcccceeeeecccCHHHhcC
Confidence                        1245789999999999864

>KOG0986|consensus

Probab=99.87  E-value=1.2e-22  Score=122.64  Aligned_cols=94  Identities=23%  Similarity=0.304  Sum_probs=84.3

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      |.||+|.-++.+.+...++++.+++|+.+|+.|+.+||..+|+.||++|.||++    +..+.+.|+|.|++..+... .
T Consensus       267 MNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL----Dd~GhvRISDLGLAvei~~g~~  342 (591)
T KOG0986|consen  267 MNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL----DDHGHVRISDLGLAVEIPEGKP  342 (591)
T ss_pred             ecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee----ccCCCeEeeccceEEecCCCCc
Confidence            789999999988887789999999999999999999999999999999999999    88899999999999987654 2


Q ss_pred             cceecccccccCcccccCC
Q psy11820         80 CNTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~~   98 (98)
                      .....||..|||||++..+
T Consensus       343 ~~~rvGT~GYMAPEvl~ne  361 (591)
T KOG0986|consen  343 IRGRVGTVGYMAPEVLQNE  361 (591)
T ss_pred             cccccCcccccCHHHHcCC
Confidence            3344899999999998754

>KOG0578|consensus

Probab=99.86  E-value=8.9e-22  Score=120.62  Aligned_cols=90  Identities=30%  Similarity=0.488  Sum_probs=78.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      |.+|+|-|.+....   +++..+..++++++.||.|||.++|+||||+..||++    ...+.+||.|||++..+..  .
T Consensus       352 m~ggsLTDvVt~~~---~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL----~~~g~vKltDFGFcaqi~~~~~  424 (550)
T KOG0578|consen  352 MEGGSLTDVVTKTR---MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILL----TMDGSVKLTDFGFCAQISEEQS  424 (550)
T ss_pred             cCCCchhhhhhccc---ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEe----ccCCcEEEeeeeeeeccccccC
Confidence            67899999887553   8999999999999999999999999999999999999    7777899999998877643  2


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ...+..|||+|||||+...
T Consensus       425 KR~TmVGTPYWMAPEVvtr  443 (550)
T KOG0578|consen  425 KRSTMVGTPYWMAPEVVTR  443 (550)
T ss_pred             ccccccCCCCccchhhhhh
Confidence            4567889999999999764

>KOG0582|consensus

Probab=99.86  E-value=2.1e-21  Score=116.84  Aligned_cols=93  Identities=33%  Similarity=0.448  Sum_probs=79.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      |.+|++.++++..-...+.+..+..++++++.|+.|+|.+|.||||+++.||++    +..+.++|+|||.+..+...  
T Consensus       106 Ma~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi----~~dG~VkLadFgvsa~l~~~G~  181 (516)
T KOG0582|consen  106 MAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI----DSDGTVKLADFGVSASLFDSGD  181 (516)
T ss_pred             hcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE----cCCCcEEEcCceeeeeecccCc
Confidence            789999999998765679999999999999999999999999999999999999    88889999999976654221  


Q ss_pred             c---c-ceecccccccCcccccC
Q psy11820         79 V---C-NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~---~-~~~~~~~~~~~pe~~~~   97 (98)
                      .   . .++.++++|||||+++.
T Consensus       182 R~~~rf~tfvgtp~wmAPEvl~q  204 (516)
T KOG0582|consen  182 RQVTRFNTFVGTPCWMAPEVLMQ  204 (516)
T ss_pred             eeeEeeccccCcccccChHHhhh
Confidence            1   1 45689999999999653

>KOG0591|consensus

Probab=99.85  E-value=1.8e-21  Score=112.09  Aligned_cols=92  Identities=27%  Similarity=0.379  Sum_probs=78.0

Q ss_pred             cchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHH--cC--CcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820          2 LEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQ--LG--LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus         2 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~--~~--~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      ..|+|.++++.-  ....+++++++.++.|++.|+..||+  ..  ++||||+|.||++    +..+.+|+.|||+++.+
T Consensus       103 ~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl----~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen  103 DAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL----TANGVVKLGDFGLGRFL  178 (375)
T ss_pred             cccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE----cCCCceeeccchhHhHh
Confidence            468888888633  34468999999999999999999998  44  8999999999999    77789999999999987


Q ss_pred             ccc--ccceecccccccCcccccC
Q psy11820         76 SKA--VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        76 ~~~--~~~~~~~~~~~~~pe~~~~   97 (98)
                      ...  -..+..|||.||+||.+.+
T Consensus       179 ~s~~tfA~S~VGTPyYMSPE~i~~  202 (375)
T KOG0591|consen  179 SSKTTFAHSLVGTPYYMSPERIHE  202 (375)
T ss_pred             cchhHHHHhhcCCCcccCHHHHhc
Confidence            654  2356789999999999875

>KOG0593|consensus

Probab=99.85  E-value=2.6e-21  Score=112.25  Aligned_cols=89  Identities=34%  Similarity=0.552  Sum_probs=75.0

Q ss_pred             hHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--cccce
Q psy11820          5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--AVCNT   82 (98)
Q Consensus         5 ~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~   82 (98)
                      ++.+-+..... .++.+.+..++.|++.|+.|||+++++||||+|+||++    ...+.+++.|||+++.+..  .....
T Consensus        86 TvL~eLe~~p~-G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILi----t~~gvvKLCDFGFAR~L~~pgd~YTD  160 (396)
T KOG0593|consen   86 TVLHELERYPN-GVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILI----TQNGVVKLCDFGFARTLSAPGDNYTD  160 (396)
T ss_pred             HHHHHHHhccC-CCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEE----ecCCcEEeccchhhHhhcCCcchhhh
Confidence            44444554443 48899999999999999999999999999999999999    7788999999999998762  24566


Q ss_pred             ecccccccCcccccCC
Q psy11820         83 YLQSRYYRAPEIILGE   98 (98)
Q Consensus        83 ~~~~~~~~~pe~~~~~   98 (98)
                      +..|.||.|||.+.|+
T Consensus       161 YVATRWYRaPELLvGD  176 (396)
T KOG0593|consen  161 YVATRWYRAPELLVGD  176 (396)
T ss_pred             hhhhhhccChhhhccc
Confidence            7889999999998873

>KOG0197|consensus

Probab=99.85  E-value=3.4e-21  Score=117.12  Aligned_cols=92  Identities=25%  Similarity=0.338  Sum_probs=76.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      |..|+|.+|++......+.......++.||++|+.||+++++||||+.++||++    +....+||+|||+++.......
T Consensus       283 m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV----~~~~~vKIsDFGLAr~~~d~~Y  358 (468)
T KOG0197|consen  283 MPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILV----DEDLVVKISDFGLARLIGDDEY  358 (468)
T ss_pred             cccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheee----ccCceEEEcccccccccCCCce
Confidence            678999999998555678899999999999999999999999999999999999    7777999999999995544333


Q ss_pred             ceecc---cccccCccccc
Q psy11820         81 NTYLQ---SRYYRAPEIIL   96 (98)
Q Consensus        81 ~~~~~---~~~~~~pe~~~   96 (98)
                      ....+   +..|.|||.+.
T Consensus       359 ~~~~~~kfPIkWtAPEa~~  377 (468)
T KOG0197|consen  359 TASEGGKFPIKWTAPEALN  377 (468)
T ss_pred             eecCCCCCCceecCHHHHh
Confidence            22222   33599999875

>KOG0584|consensus

Probab=99.84  E-value=4.8e-21  Score=118.69  Aligned_cols=91  Identities=26%  Similarity=0.397  Sum_probs=81.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~   78 (98)
                      |+.|+|..|.++.+  .+..+.+...++||+.||.|||++.  |+|||++..||++.   ...+.+||.|+|++.....+
T Consensus       125 ~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin---G~~G~VKIGDLGLAtl~r~s  199 (632)
T KOG0584|consen  125 FTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN---GNLGEVKIGDLGLATLLRKS  199 (632)
T ss_pred             ccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc---CCcCceeecchhHHHHhhcc
Confidence            67899999999866  7889999999999999999999986  99999999999993   44678999999999988776


Q ss_pred             ccceecccccccCccccc
Q psy11820         79 VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~   96 (98)
                      ......|||.|||||++-
T Consensus       200 ~aksvIGTPEFMAPEmYE  217 (632)
T KOG0584|consen  200 HAKSVIGTPEFMAPEMYE  217 (632)
T ss_pred             ccceeccCccccChHHHh
Confidence            666789999999999864

>KOG0604|consensus

Probab=99.84  E-value=1.4e-20  Score=109.16  Aligned_cols=96  Identities=25%  Similarity=0.339  Sum_probs=82.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec-ccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS-KAV   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~   79 (98)
                      |.||+|+..+...+...+++.++..+++||..|+.|||+.+|.|||++++|++.... ..+..+||.|||++..-. ...
T Consensus       141 meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t-~~na~lKLtDfGFAK~t~~~~~  219 (400)
T KOG0604|consen  141 MEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTT-SPNAPLKLTDFGFAKETQEPGD  219 (400)
T ss_pred             ccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecC-CCCcceEecccccccccCCCcc
Confidence            679999999998887789999999999999999999999999999999999998554 456678999999998654 334


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      ..+.+-||+|.|||++-.
T Consensus       220 L~TPc~TPyYvaPevlg~  237 (400)
T KOG0604|consen  220 LMTPCFTPYYVAPEVLGP  237 (400)
T ss_pred             ccCCcccccccCHHHhCc
Confidence            566777999999999753

>KOG0694|consensus

Probab=99.84  E-value=1.5e-21  Score=121.84  Aligned_cols=90  Identities=23%  Similarity=0.313  Sum_probs=75.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec--ccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--KAV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~~~   79 (98)
                      .||++..+...   ..+++..+.+|+++|+.||+|||+++||+||++.+|+++    +..+.++|+|||++....  ...
T Consensus       452 ~Ggdm~~~~~~---~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL----D~eGh~kiADFGlcKe~m~~g~~  524 (694)
T KOG0694|consen  452 AGGDLMHHIHT---DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL----DTEGHVKIADFGLCKEGMGQGDR  524 (694)
T ss_pred             CCCcEEEEEec---ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE----cccCcEEecccccccccCCCCCc
Confidence            45663333332   358999999999999999999999999999999999999    788899999999998653  234


Q ss_pred             cceecccccccCcccccCC
Q psy11820         80 CNTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~~   98 (98)
                      ..+++|||.|||||++.++
T Consensus       525 TsTfCGTpey~aPEil~e~  543 (694)
T KOG0694|consen  525 TSTFCGTPEFLAPEVLTEQ  543 (694)
T ss_pred             cccccCChhhcChhhhccC
Confidence            5788999999999999864

>KOG0600|consensus

Probab=99.83  E-value=1.7e-20  Score=114.24  Aligned_cols=89  Identities=26%  Similarity=0.422  Sum_probs=73.8

Q ss_pred             hHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---ccc
Q psy11820          5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---VCN   81 (98)
Q Consensus         5 ~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---~~~   81 (98)
                      ||.-++... .-.|++..+..++.|++.|+.|||+++++||||+..|+++    +..+.++|+|||+++.+...   ...
T Consensus       203 DL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi----dn~G~LKiaDFGLAr~y~~~~~~~~T  277 (560)
T KOG0600|consen  203 DLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI----DNNGVLKIADFGLARFYTPSGSAPYT  277 (560)
T ss_pred             hhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE----cCCCCEEeccccceeeccCCCCcccc
Confidence            344444332 2368999999999999999999999999999999999999    88899999999999976543   244


Q ss_pred             eecccccccCcccccCC
Q psy11820         82 TYLQSRYYRAPEIILGE   98 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~~   98 (98)
                      +.+-|.||.|||.++|.
T Consensus       278 ~rVvTLWYRpPELLLG~  294 (560)
T KOG0600|consen  278 SRVVTLWYRPPELLLGA  294 (560)
T ss_pred             cceEEeeccChHHhcCC
Confidence            56678999999999874

>KOG0605|consensus

Probab=99.83  E-value=2.4e-20  Score=114.06  Aligned_cols=68  Identities=25%  Similarity=0.498  Sum_probs=63.3

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ++||++-.++-+.+  .|++..+++|+.+++.|+..+|+.|++||||+|.|+++    +..+.++|+|||++..
T Consensus       223 lPGGD~mTLL~~~~--~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi----D~~GHiKLSDFGLs~g  290 (550)
T KOG0605|consen  223 LPGGDMMTLLMRKD--TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI----DAKGHIKLSDFGLSTG  290 (550)
T ss_pred             cCCccHHHHHHhcC--cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee----cCCCCEeeccccccch
Confidence            57999999998766  89999999999999999999999999999999999999    8888999999999743

>KOG0659|consensus

Probab=99.83  E-value=3.4e-20  Score=105.80  Aligned_cols=91  Identities=26%  Similarity=0.450  Sum_probs=76.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      +..+|+..++.+. -.++...+..++.+++.|++|||++.|+|||++|.|+++    ...+.+|++|||+++.++...  
T Consensus        83 m~tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLi----s~~g~lKiADFGLAr~f~~p~~~  157 (318)
T KOG0659|consen   83 MPTDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLI----SSDGQLKIADFGLARFFGSPNRI  157 (318)
T ss_pred             ccccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEE----cCCCcEEeecccchhccCCCCcc
Confidence            3567888887553 368999999999999999999999999999999999999    777899999999999876432  


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....-|.||.|||.++|
T Consensus       158 ~~~~V~TRWYRAPELLfG  175 (318)
T KOG0659|consen  158 QTHQVVTRWYRAPELLFG  175 (318)
T ss_pred             cccceeeeeccChHHhcc
Confidence            222367889999999886

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.82  E-value=5e-20  Score=110.90  Aligned_cols=68  Identities=26%  Similarity=0.464  Sum_probs=61.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|+|+++++|+|+++.||++    +..+.++|.|||++..
T Consensus        83 ~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi----~~~~~vkL~DFGla~~  150 (363)
T cd05628          83 LPGGDMMTLLMKKD--TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLL----DSKGHVKLSDFGLCTG  150 (363)
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE----CCCCCEEEeeccCccc
Confidence            35889999998654  68999999999999999999999999999999999999    6667899999998764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.82  E-value=7.9e-20  Score=108.56  Aligned_cols=91  Identities=25%  Similarity=0.321  Sum_probs=75.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|+|||++.....  .
T Consensus        77 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll----~~~~~~kl~DfG~a~~~~~~~~  150 (323)
T cd05571          77 ANGGELFFHLSRER--VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML----DKDGHIKITDFGLCKEGISDGA  150 (323)
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE----CCCCCEEEeeCCCCcccccCCC
Confidence            35789999987654  68999999999999999999999999999999999999    6677899999998865321  1


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       151 ~~~~~~gt~~y~aPE~~~~  169 (323)
T cd05571         151 TMKTFCGTPEYLAPEVLED  169 (323)
T ss_pred             cccceecCccccChhhhcC
Confidence            2234568899999998764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0580|consensus

Probab=99.82  E-value=3.3e-20  Score=104.49  Aligned_cols=92  Identities=27%  Similarity=0.414  Sum_probs=81.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+|+|+..+...+...++++....+..|++.|+.|||..+++|||++|.|+++    +..+.++++|||.+.........
T Consensus       105 ~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLl----g~~~~lkiAdfGwsV~~p~~kR~  180 (281)
T KOG0580|consen  105 PRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLL----GSAGELKIADFGWSVHAPSNKRK  180 (281)
T ss_pred             CCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhcc----CCCCCeeccCCCceeecCCCCce
Confidence            47899999986655679999999999999999999999999999999999999    66778999999999877666678


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      +.+||..|++||+..+
T Consensus       181 tlcgt~dyl~pEmv~~  196 (281)
T KOG0580|consen  181 TLCGTLDYLPPEMVEG  196 (281)
T ss_pred             eeecccccCCHhhcCC
Confidence            8899999999998754

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.81  E-value=9.6e-20  Score=110.04  Aligned_cols=90  Identities=28%  Similarity=0.541  Sum_probs=75.3

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+|+|.+++...   .+++..+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|+|||++......  
T Consensus       125 ~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl----~~~~~~kL~DFG~a~~~~~~~~  197 (370)
T cd05621         125 MPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL----DKHGHLKLADFGTCMKMDETGM  197 (370)
T ss_pred             CCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE----CCCCCEEEEecccceecccCCc
Confidence            3588999999754   47889999999999999999999999999999999999    66678999999998765322  


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+++.|+|||++.+
T Consensus       198 ~~~~~~~gt~~Y~aPE~~~~  217 (370)
T cd05621         198 VRCDTAVGTPDYISPEVLKS  217 (370)
T ss_pred             eecccCCCCcccCCHHHHhc
Confidence             1234568999999998753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0033|consensus

Probab=99.81  E-value=4.8e-20  Score=104.76  Aligned_cols=94  Identities=26%  Similarity=0.391  Sum_probs=75.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      |.|++|..=+-...  .+++..+..+++|+++++.|||.++|+|||++|.|+++... .....+|+.+||++..++.. .
T Consensus        92 m~G~dl~~eIV~R~--~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK-~~~A~vKL~~FGvAi~l~~g~~  168 (355)
T KOG0033|consen   92 VTGGELFEDIVARE--FYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASK-AKGAAVKLADFGLAIEVNDGEA  168 (355)
T ss_pred             ccchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeec-cCCCceeecccceEEEeCCccc
Confidence            56777765443322  47888899999999999999999999999999999999664 34567899999999887643 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      ..-+.|+|.||+||++..
T Consensus       169 ~~G~~GtP~fmaPEvvrk  186 (355)
T KOG0033|consen  169 WHGFAGTPGYLSPEVLKK  186 (355)
T ss_pred             cccccCCCcccCHHHhhc
Confidence            345679999999999864

>KOG0660|consensus

Probab=99.81  E-value=3.7e-20  Score=108.75  Aligned_cols=89  Identities=34%  Similarity=0.594  Sum_probs=78.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc----
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK----   77 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~----   77 (98)
                      ++.+|.+.++...  .|+..-++.++.|++.|+.|+|+.+++|||++|.|+++    ..++.+|+.|||+++....    
T Consensus       108 MetDL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~----n~~c~lKI~DFGLAR~~~~~~~~  181 (359)
T KOG0660|consen  108 METDLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL----NADCDLKICDFGLARYLDKFFED  181 (359)
T ss_pred             HhhHHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhcccccccccchhheee----ccCCCEEeccccceeeccccCcc
Confidence            5788999998765  69999999999999999999999999999999999999    7888999999999998742    


Q ss_pred             cccceecccccccCccccc
Q psy11820         78 AVCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        78 ~~~~~~~~~~~~~~pe~~~   96 (98)
                      .....+..|.||.|||++.
T Consensus       182 ~~mTeYVaTRWYRAPElll  200 (359)
T KOG0660|consen  182 GFMTEYVATRWYRAPELLL  200 (359)
T ss_pred             cchhcceeeeeecCHHHHh
Confidence            2335567899999999875

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=1.2e-19  Score=108.00  Aligned_cols=90  Identities=26%  Similarity=0.399  Sum_probs=74.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--AV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~   79 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|||+++++|+|+++.||++    ...+.++|+|||++.....  ..
T Consensus        79 ~~g~L~~~l~~~~--~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili----~~~~~~kl~Dfg~a~~~~~~~~~  152 (330)
T cd05586          79 SGGELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL----DATGHIALCDFGLSKANLTDNKT  152 (330)
T ss_pred             CCChHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE----CCCCCEEEecCCcCcCCCCCCCC
Confidence            5789999887654  68999999999999999999999999999999999999    6667899999998864321  22


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~  170 (330)
T cd05586         153 TNTFCGTTEYLAPEVLLD  170 (330)
T ss_pred             ccCccCCccccCHHHHcC
Confidence            234568899999998753

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG1187|consensus

Probab=99.81  E-value=7.1e-20  Score=110.18  Aligned_cols=92  Identities=29%  Similarity=0.331  Sum_probs=76.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC---CcccCCCCCcEEEecCCCCCccEEEeeecCceeecc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLG---LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK   77 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~   77 (98)
                      |.||+|.+++.......++|+....++.+++.|++|||...   |+|||+++.||++    +.....|++|||++.....
T Consensus       154 m~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL----D~~~~aKlsDFGLa~~~~~  229 (361)
T KOG1187|consen  154 MPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL----DEDFNAKLSDFGLAKLGPE  229 (361)
T ss_pred             cCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE----CCCCCEEccCccCcccCCc
Confidence            67899999998654327899999999999999999999844   9999999999999    7788999999999965543


Q ss_pred             -ccc-cee-cccccccCccccc
Q psy11820         78 -AVC-NTY-LQSRYYRAPEIIL   96 (98)
Q Consensus        78 -~~~-~~~-~~~~~~~~pe~~~   96 (98)
                       ... .+. .|+..|++||...
T Consensus       230 ~~~~~~~~~~gt~gY~~PEy~~  251 (361)
T KOG1187|consen  230 GDTSVSTTVMGTFGYLAPEYAS  251 (361)
T ss_pred             cccceeeecCCCCccCChhhhc
Confidence             221 222 7899999999874

>KOG0663|consensus

Probab=99.81  E-value=8.8e-20  Score=107.03  Aligned_cols=90  Identities=29%  Similarity=0.525  Sum_probs=78.5

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--c
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--C   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--~   80 (98)
                      .-+|...+.+.+ ..+...++.-+..|++.|+.|||++.|+|||+++.|+++    ...+.++++|||+++.++...  .
T Consensus       160 EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm----~~~G~lKiaDFGLAR~ygsp~k~~  234 (419)
T KOG0663|consen  160 EHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL----SHKGILKIADFGLAREYGSPLKPY  234 (419)
T ss_pred             HhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee----ccCCcEEecccchhhhhcCCcccC
Confidence            457888887765 578899999999999999999999999999999999999    788899999999999887652  3


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      .....|.||.|||.+.|
T Consensus       235 T~lVVTLWYRaPELLLG  251 (419)
T KOG0663|consen  235 TPLVVTLWYRAPELLLG  251 (419)
T ss_pred             cceEEEeeecCHHHhcC
Confidence            45567899999999886

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.81  E-value=1.5e-19  Score=107.63  Aligned_cols=91  Identities=27%  Similarity=0.399  Sum_probs=75.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++....  .++++.+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|+|||++......  
T Consensus        87 ~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili----~~~~~~kl~DfG~~~~~~~~~~  160 (332)
T cd05614          87 VSGGEMFTHLYQRD--NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL----DSEGHVVLTDFGLSKEFLSEEK  160 (332)
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEE----CCCCCEEEeeCcCCccccccCC
Confidence            35789999987654  68999999999999999999999999999999999999    66678999999998754221  


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+++.|+|||++.+
T Consensus       161 ~~~~~~~gt~~y~aPE~~~~  180 (332)
T cd05614         161 ERTYSFCGTIEYMAPEIIRG  180 (332)
T ss_pred             CccccccCCccccCHHHhcC
Confidence             1234568899999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0589|consensus

Probab=99.81  E-value=3.7e-20  Score=112.01  Aligned_cols=92  Identities=30%  Similarity=0.411  Sum_probs=82.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .||+|.+.+...+...++++.+..++.|++.|+.|||++.|+|||+++.||++    .....+++.|||++..+...  .
T Consensus        87 eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifl----tk~~~VkLgDfGlaK~l~~~~~~  162 (426)
T KOG0589|consen   87 EGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFL----TKDKKVKLGDFGLAKILNPEDSL  162 (426)
T ss_pred             CCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhc----cccCceeecchhhhhhcCCchhh
Confidence            58999999988876789999999999999999999999999999999999999    66667899999999987654  5


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      ..+..||+.|++||++.+
T Consensus       163 a~tvvGTp~YmcPEil~d  180 (426)
T KOG0589|consen  163 ASTVVGTPYYMCPEILSD  180 (426)
T ss_pred             hheecCCCcccCHHHhCC
Confidence            577899999999999875

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.81  E-value=1.6e-19  Score=108.04  Aligned_cols=90  Identities=31%  Similarity=0.457  Sum_probs=76.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.++++|||++...... .
T Consensus       113 ~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl----~~~~~ikL~DFG~a~~~~~~-~  185 (340)
T PTZ00426        113 VIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL----DKDGFIKMTDFGFAKVVDTR-T  185 (340)
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE----CCCCCEEEecCCCCeecCCC-c
Confidence            35789999998655  68999999999999999999999999999999999999    66778999999998765332 2


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       186 ~~~~gt~~y~aPE~~~~  202 (340)
T PTZ00426        186 YTLCGTPEYIAPEILLN  202 (340)
T ss_pred             ceecCChhhcCHHHHhC
Confidence            34568899999998754

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=2.1e-19  Score=107.05  Aligned_cols=90  Identities=29%  Similarity=0.455  Sum_probs=76.2

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++..... ..
T Consensus        83 ~~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~kL~Dfg~a~~~~~-~~  155 (333)
T cd05600          83 VPGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI----DASGHIKLTDFGLSKGIVT-YA  155 (333)
T ss_pred             CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE----CCCCCEEEEeCcCCccccc-cc
Confidence            35889999997654  68899999999999999999999999999999999999    6677899999998875433 22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       156 ~~~~gt~~y~aPE~~~~  172 (333)
T cd05600         156 NSVVGSPDYMAPEVLRG  172 (333)
T ss_pred             CCcccCccccChhHhcC
Confidence            34568889999998764

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.81  E-value=1.9e-19  Score=107.15  Aligned_cols=90  Identities=30%  Similarity=0.417  Sum_probs=76.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+++++|+|+++.||++    +..+.++|.|||++...... .
T Consensus       100 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll----~~~~~~kl~Dfg~~~~~~~~-~  172 (329)
T PTZ00263        100 VVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL----DNKGHVKVTDFGFAKKVPDR-T  172 (329)
T ss_pred             CCCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE----CCCCCEEEeeccCceEcCCC-c
Confidence            35789999998654  68899999999999999999999999999999999999    66778999999998765432 2


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       173 ~~~~gt~~y~aPE~~~~  189 (329)
T PTZ00263        173 FTLCGTPEYLAPEVIQS  189 (329)
T ss_pred             ceecCChhhcCHHHHcC
Confidence            34568899999998764

>KOG4717|consensus

Probab=99.81  E-value=1.1e-19  Score=112.07  Aligned_cols=92  Identities=30%  Similarity=0.480  Sum_probs=80.1

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-ccc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCN   81 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~   81 (98)
                      +|+|+||+-.... .+.+..+..|++||+.|+.|||+..++|||++|+|+++.   ...+.+++.|||++..+... ...
T Consensus       101 ~GDl~DyImKHe~-Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF---EKlGlVKLTDFGFSNkf~PG~kL~  176 (864)
T KOG4717|consen  101 GGDLFDYIMKHEE-GLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF---EKLGLVKLTDFGFSNKFQPGKKLT  176 (864)
T ss_pred             CchHHHHHHhhhc-cccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe---eecCceEeeeccccccCCCcchhh
Confidence            5799999976653 599999999999999999999999999999999999883   45678999999999876543 457


Q ss_pred             eecccccccCcccccCC
Q psy11820         82 TYLQSRYYRAPEIILGE   98 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~~   98 (98)
                      +.+|+..|.|||++.|+
T Consensus       177 TsCGSLAYSAPEILLGD  193 (864)
T KOG4717|consen  177 TSCGSLAYSAPEILLGD  193 (864)
T ss_pred             cccchhhccCchhhhcC
Confidence            88999999999999874

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.81  E-value=2.7e-19  Score=104.64  Aligned_cols=93  Identities=22%  Similarity=0.250  Sum_probs=75.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+++|.+++.......+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||++...... .
T Consensus        82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill----~~~~~~kl~Dfg~~~~~~~~~~  157 (285)
T cd05631          82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILL----DDRGHIRISDLGLAVQIPEGET  157 (285)
T ss_pred             cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE----CCCCCEEEeeCCCcEEcCCCCe
Confidence            457899888865444468899999999999999999999999999999999999    66678999999998765322 1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       158 ~~~~~g~~~y~aPE~~~~  175 (285)
T cd05631         158 VRGRVGTVGYMAPEVINN  175 (285)
T ss_pred             ecCCCCCCCccCHhhhcC
Confidence            233467889999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.81  E-value=1.7e-19  Score=108.45  Aligned_cols=68  Identities=26%  Similarity=0.464  Sum_probs=60.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||++..
T Consensus        83 ~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli----~~~~~vkL~DfG~~~~  150 (360)
T cd05627          83 LPGGDMMTLLMKKD--TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLL----DAKGHVKLSDFGLCTG  150 (360)
T ss_pred             CCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE----CCCCCEEEeeccCCcc
Confidence            35789999997654  68999999999999999999999999999999999999    6677899999998754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=2.3e-19  Score=106.13  Aligned_cols=91  Identities=32%  Similarity=0.468  Sum_probs=75.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++++|||++.....  .
T Consensus        75 ~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili----~~~~~~kl~Dfg~~~~~~~~~~  148 (312)
T cd05585          75 INGGELFHHLQREG--RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL----DYQGHIALCDFGLCKLNMKDDD  148 (312)
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE----CCCCcEEEEECcccccCccCCC
Confidence            35789999997654  68999999999999999999999999999999999999    6677899999998875322  1


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       149 ~~~~~~gt~~y~aPE~~~~  167 (312)
T cd05585         149 KTNTFCGTPEYLAPELLLG  167 (312)
T ss_pred             ccccccCCcccCCHHHHcC
Confidence            2234568899999998754

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.80  E-value=2.2e-19  Score=106.45  Aligned_cols=91  Identities=24%  Similarity=0.360  Sum_probs=75.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++.....  .
T Consensus        78 ~~gg~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill----~~~~~~kL~Dfg~a~~~~~~~~  151 (316)
T cd05592          78 LNGGDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL----DKDGHIKIADFGMCKENMNGEG  151 (316)
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE----CCCCCEEEccCcCCeECCCCCC
Confidence            35789999997654  68999999999999999999999999999999999999    6667899999999875422  2


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       152 ~~~~~~gt~~y~aPE~~~~  170 (316)
T cd05592         152 KASTFCGTPDYIAPEILKG  170 (316)
T ss_pred             ccccccCCccccCHHHHcC
Confidence            2234568899999998764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=1.8e-19  Score=105.63  Aligned_cols=90  Identities=27%  Similarity=0.366  Sum_probs=75.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+++++|+|+++.||++    +..+.+++.|||++...... .
T Consensus        83 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli----~~~~~~kl~Dfg~~~~~~~~-~  155 (291)
T cd05612          83 VPGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILL----DKEGHIKLTDFGFAKKLRDR-T  155 (291)
T ss_pred             CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE----CCCCCEEEEecCcchhccCC-c
Confidence            35789999998654  68899999999999999999999999999999999999    66678999999998765332 2


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       156 ~~~~gt~~y~aPE~~~~  172 (291)
T cd05612         156 WTLCGTPEYLAPEVIQS  172 (291)
T ss_pred             ccccCChhhcCHHHHcC
Confidence            34467889999998764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0612|consensus

Probab=99.80  E-value=9.7e-20  Score=118.97  Aligned_cols=91  Identities=26%  Similarity=0.482  Sum_probs=80.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc-c-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-A-   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~-   78 (98)
                      |+||+|..++....  .+++..+++|+.+|+.|+.-+|+.|+||||++|.|+++    +..|.++|+|||.+..+.. + 
T Consensus       157 ~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl----d~~GHikLADFGsClkm~~dG~  230 (1317)
T KOG0612|consen  157 MPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL----DKSGHIKLADFGSCLKMDADGT  230 (1317)
T ss_pred             ccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe----cccCcEeeccchhHHhcCCCCc
Confidence            68999999998755  79999999999999999999999999999999999999    8889999999997765542 2 


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       .+...+|||.|++||++..
T Consensus       231 V~s~~aVGTPDYISPEvLqs  250 (1317)
T KOG0612|consen  231 VRSSVAVGTPDYISPEVLQS  250 (1317)
T ss_pred             EEeccccCCCCccCHHHHHh
Confidence             2345689999999999863

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.80  E-value=3.3e-19  Score=105.94  Aligned_cols=91  Identities=25%  Similarity=0.286  Sum_probs=75.2

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec--cc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--KA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~~   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|+|||++....  ..
T Consensus        83 ~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill----~~~~~~kL~Dfg~~~~~~~~~~  156 (324)
T cd05587          83 VNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML----DAEGHIKIADFGMCKENIFGGK  156 (324)
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE----cCCCCEEEeecCcceecCCCCC
Confidence            35789999987654  68899999999999999999999999999999999999    666789999999876432  12


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       157 ~~~~~~gt~~y~aPE~~~~  175 (324)
T cd05587         157 TTRTFCGTPDYIAPEIIAY  175 (324)
T ss_pred             ceeeecCCccccChhhhcC
Confidence            2234568899999998764

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0614|consensus

Probab=99.80  E-value=7.5e-20  Score=112.25  Aligned_cols=91  Identities=33%  Similarity=0.452  Sum_probs=81.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      ++||.|-..++..+  .+...+..+++..++.|..|||+++|+.||++|+|+++    +..+.+|+.|||++..+... .
T Consensus       502 ClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL----d~~Gy~KLVDFGFAKki~~g~K  575 (732)
T KOG0614|consen  502 CLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL----DNRGYLKLVDFGFAKKIGSGRK  575 (732)
T ss_pred             hcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee----ccCCceEEeehhhHHHhccCCc
Confidence            47899999998765  79999999999999999999999999999999999999    88889999999999877544 4


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      ..+++|||.|.|||++..
T Consensus       576 TwTFcGTpEYVAPEIILn  593 (732)
T KOG0614|consen  576 TWTFCGTPEYVAPEIILN  593 (732)
T ss_pred             eeeecCCcccccchhhhc
Confidence            578899999999999874

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.80  E-value=2.8e-19  Score=106.50  Aligned_cols=91  Identities=25%  Similarity=0.320  Sum_probs=75.2

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|.|||++.....  .
T Consensus        77 ~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll----~~~~~~kL~DfG~~~~~~~~~~  150 (328)
T cd05593          77 VNGGELFFHLSRER--VFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML----DKDGHIKITDFGLCKEGITDAA  150 (328)
T ss_pred             CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEE----CCCCcEEEecCcCCccCCCccc
Confidence            35789999887654  68999999999999999999999999999999999999    6677899999998865321  1


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       151 ~~~~~~gt~~y~aPE~~~~  169 (328)
T cd05593         151 TMKTFCGTPEYLAPEVLED  169 (328)
T ss_pred             ccccccCCcCccChhhhcC
Confidence            2234568899999998764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0658|consensus

Probab=99.80  E-value=1.9e-19  Score=105.96  Aligned_cols=91  Identities=35%  Similarity=0.598  Sum_probs=74.7

Q ss_pred             hhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          4 QNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         4 ~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .||++.++..  ....++...+.-+..|+.+|+.|||+.+|+||||+|.|+++.   ...+.+||+|||.+..+... ..
T Consensus       106 ~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD---~~tg~LKicDFGSAK~L~~~epn  182 (364)
T KOG0658|consen  106 ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVD---PDTGVLKICDFGSAKVLVKGEPN  182 (364)
T ss_pred             HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEc---CCCCeEEeccCCcceeeccCCCc
Confidence            5777777631  123678888999999999999999999999999999999993   34578999999999876543 34


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      .++..|.+|.|||.+.|
T Consensus       183 iSYicSRyYRaPELifg  199 (364)
T KOG0658|consen  183 ISYICSRYYRAPELIFG  199 (364)
T ss_pred             eeEEEeccccCHHHHcC
Confidence            67788999999999876

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.80  E-value=2.6e-19  Score=106.31  Aligned_cols=91  Identities=25%  Similarity=0.273  Sum_probs=75.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|+|||++.....  .
T Consensus        83 ~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill----~~~~~~kL~DfG~~~~~~~~~~  156 (323)
T cd05616          83 VNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML----DSEGHIKIADFGMCKENMWDGV  156 (323)
T ss_pred             CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEE----CCCCcEEEccCCCceecCCCCC
Confidence            35789999887654  68899999999999999999999999999999999999    6677899999998875432  1


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       157 ~~~~~~gt~~y~aPE~~~~  175 (323)
T cd05616         157 TTKTFCGTPDYIAPEIIAY  175 (323)
T ss_pred             ccccCCCChhhcCHHHhcC
Confidence            2234568899999998764

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.80  E-value=2.7e-19  Score=106.35  Aligned_cols=91  Identities=25%  Similarity=0.362  Sum_probs=75.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+++++|+|+++.||++    +..+.++|.|||++.....  .
T Consensus        78 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili----~~~~~~kl~DfG~a~~~~~~~~  151 (325)
T cd05602          78 INGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL----DSQGHIVLTDFGLCKENIEHNG  151 (325)
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE----CCCCCEEEccCCCCcccccCCC
Confidence            35789999987654  68888899999999999999999999999999999999    6667899999998865321  1


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       152 ~~~~~~gt~~y~aPE~~~~  170 (325)
T cd05602         152 TTSTFCGTPEYLAPEVLHK  170 (325)
T ss_pred             CcccccCCccccCHHHHcC
Confidence            2234568899999998764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=3.2e-19  Score=107.31  Aligned_cols=69  Identities=23%  Similarity=0.458  Sum_probs=61.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||++...
T Consensus        83 ~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~----~~~~~~kl~Dfg~~~~~  151 (364)
T cd05599          83 LPGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL----DAKGHIKLSDFGLCTGL  151 (364)
T ss_pred             CCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE----CCCCCEEEeecccceec
Confidence            35789999997654  68999999999999999999999999999999999999    66778999999987643

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.80  E-value=3.8e-19  Score=105.60  Aligned_cols=91  Identities=24%  Similarity=0.325  Sum_probs=75.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|+|||++.....  .
T Consensus        78 ~~~g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli----~~~~~~kL~DfG~~~~~~~~~~  151 (320)
T cd05590          78 VNGGDLMFHIQKSR--RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL----DHEGHCKLADFGMCKEGIFNGK  151 (320)
T ss_pred             CCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE----CCCCcEEEeeCCCCeecCcCCC
Confidence            35789999887654  68999999999999999999999999999999999999    6667899999998765321  1


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       152 ~~~~~~gt~~y~aPE~~~~  170 (320)
T cd05590         152 TTSTFCGTPDYIAPEILQE  170 (320)
T ss_pred             cccccccCccccCHHHHcC
Confidence            2234568899999998754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.80  E-value=5.8e-19  Score=104.93  Aligned_cols=91  Identities=26%  Similarity=0.332  Sum_probs=74.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--   77 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--   77 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+ .+++|+|+++.||++    +..+.++|.|||++.....  
T Consensus        77 ~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll----~~~~~~kL~Dfg~~~~~~~~~  150 (325)
T cd05594          77 ANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML----DKDGHIKITDFGLCKEGIKDG  150 (325)
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE----CCCCCEEEecCCCCeecCCCC
Confidence            35789999887654  68999999999999999999998 799999999999999    6677899999998865321  


Q ss_pred             cccceecccccccCcccccC
Q psy11820         78 AVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 ~~~~~~~~~~~~~~pe~~~~   97 (98)
                      .......+++.|+|||++.+
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~  170 (325)
T cd05594         151 ATMKTFCGTPEYLAPEVLED  170 (325)
T ss_pred             cccccccCCcccCCHHHHcc
Confidence            12234568899999998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.80  E-value=3.5e-19  Score=107.60  Aligned_cols=90  Identities=28%  Similarity=0.541  Sum_probs=74.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+|+|.+++...   .+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|+|||++......  
T Consensus       125 ~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl----~~~~~~kL~DfG~~~~~~~~~~  197 (370)
T cd05596         125 MPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL----DKSGHLKLADFGTCMKMDANGM  197 (370)
T ss_pred             CCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE----cCCCCEEEEeccceeeccCCCc
Confidence            3588999998754   47888999999999999999999999999999999999    66778999999998765322  


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+++.|+|||++.+
T Consensus       198 ~~~~~~~gt~~y~aPE~~~~  217 (370)
T cd05596         198 VRCDTAVGTPDYISPEVLKS  217 (370)
T ss_pred             ccCCCCCCCcCeECHHHhcc
Confidence             1234568899999998753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG4236|consensus

Probab=99.80  E-value=1.8e-19  Score=111.33  Aligned_cols=95  Identities=27%  Similarity=0.457  Sum_probs=82.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      ++|+..+++-.++.+.+++....++..||+.|+.|||-.+|+|+|++|+|+++... +....+|+.|||++++.+.. -.
T Consensus       645 l~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~-~~FPQvKlCDFGfARiIgEksFR  723 (888)
T KOG4236|consen  645 LHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASA-SPFPQVKLCDFGFARIIGEKSFR  723 (888)
T ss_pred             hcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccC-CCCCceeeccccceeecchhhhh
Confidence            46788888877777789999999999999999999999999999999999999654 34557899999999988653 45


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      .+..|||.|+|||++..
T Consensus       724 rsVVGTPAYLaPEVLrn  740 (888)
T KOG4236|consen  724 RSVVGTPAYLAPEVLRN  740 (888)
T ss_pred             hhhcCCccccCHHHHhh
Confidence            67889999999999875

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.80  E-value=3.3e-19  Score=105.95  Aligned_cols=91  Identities=24%  Similarity=0.321  Sum_probs=75.2

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+++++|+|+++.||++    +..+.+++.|||++.....  .
T Consensus        77 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kL~Dfg~~~~~~~~~~  150 (323)
T cd05595          77 ANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML----DKDGHIKITDFGLCKEGISDGA  150 (323)
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE----cCCCCEEecccHHhccccCCCC
Confidence            45789999887654  68999999999999999999999999999999999999    6667899999998765321  1


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       151 ~~~~~~gt~~y~aPE~~~~  169 (323)
T cd05595         151 TMKTFCGTPEYLAPEVLED  169 (323)
T ss_pred             ccccccCCcCcCCcccccC
Confidence            2234568899999998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.80  E-value=3.2e-19  Score=106.26  Aligned_cols=91  Identities=26%  Similarity=0.374  Sum_probs=75.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec--cc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--KA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~~   78 (98)
                      +.+++|.+++...+  .+++..+..++.|++.|+.|+|+++++|+|+++.||++    ...+.++|+|||++....  ..
T Consensus        78 ~~~g~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili----~~~~~~kL~Dfg~~~~~~~~~~  151 (329)
T cd05588          78 VSGGDLMFHMQRQR--KLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL----DAEGHIKLTDYGMCKEGIRPGD  151 (329)
T ss_pred             CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE----CCCCCEEECcCccccccccCCC
Confidence            45789999887654  69999999999999999999999999999999999999    666789999999886421  12


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       152 ~~~~~~gt~~y~aPE~~~~  170 (329)
T cd05588         152 TTSTFCGTPNYIAPEILRG  170 (329)
T ss_pred             ccccccCCccccCHHHHcC
Confidence            2234568899999998764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.80  E-value=3.7e-19  Score=105.75  Aligned_cols=91  Identities=27%  Similarity=0.387  Sum_probs=75.2

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|.|||++.....  .
T Consensus        78 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll----~~~~~~kL~DfG~~~~~~~~~~  151 (325)
T cd05604          78 VNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILL----DSQGHVVLTDFGLCKEGIAQSD  151 (325)
T ss_pred             CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE----CCCCCEEEeecCCcccCCCCCC
Confidence            35789998887654  68999999999999999999999999999999999999    6677899999998864321  1


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       152 ~~~~~~gt~~y~aPE~~~~  170 (325)
T cd05604         152 TTTTFCGTPEYLAPEVIRK  170 (325)
T ss_pred             CcccccCChhhCCHHHHcC
Confidence            2234568889999998754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.80  E-value=4e-19  Score=107.36  Aligned_cols=90  Identities=29%  Similarity=0.553  Sum_probs=74.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++...   .++...+..++.|++.|+.|+|+++++|+|+++.||++    +..+.++|+|||++......  
T Consensus       125 ~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll----~~~~~ikL~DfG~a~~~~~~~~  197 (371)
T cd05622         125 MPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL----DKSGHLKLADFGTCMKMNKEGM  197 (371)
T ss_pred             CCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE----CCCCCEEEEeCCceeEcCcCCc
Confidence            3578999998754   47888999999999999999999999999999999999    66678999999998765322  


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+++.|+|||++.+
T Consensus       198 ~~~~~~~gt~~y~aPE~l~~  217 (371)
T cd05622         198 VRCDTAVGTPDYISPEVLKS  217 (371)
T ss_pred             ccccCcccCccccCHHHHhc
Confidence             1234568999999998753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.80  E-value=3.8e-19  Score=105.44  Aligned_cols=91  Identities=25%  Similarity=0.358  Sum_probs=75.2

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec--cc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--KA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~~   78 (98)
                      +.+++|.+++....  .++...+..++.|++.|+.|+|+++++|+|+++.||++    +..+.++++|||++....  ..
T Consensus        78 ~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~  151 (316)
T cd05620          78 LNGGDLMFHIQDKG--RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML----DRDGHIKIADFGMCKENVFGDN  151 (316)
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE----CCCCCEEeCccCCCeecccCCC
Confidence            35789999987654  68889999999999999999999999999999999999    666789999999886432  22


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       152 ~~~~~~gt~~y~aPE~~~~  170 (316)
T cd05620         152 RASTFCGTPDYIAPEILQG  170 (316)
T ss_pred             ceeccCCCcCccCHHHHcC
Confidence            2344568899999998764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.79  E-value=4.2e-19  Score=105.42  Aligned_cols=91  Identities=29%  Similarity=0.397  Sum_probs=75.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+++++|+|+++.||++    +..+.+++.|||++.....  .
T Consensus        78 ~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll----~~~~~~kl~Dfg~~~~~~~~~~  151 (323)
T cd05575          78 VNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILL----DSQGHVVLTDFGLCKEGIEHSK  151 (323)
T ss_pred             CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE----CCCCcEEEeccCCCcccccCCC
Confidence            35789999987654  68899999999999999999999999999999999999    6677899999998865321  1


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       152 ~~~~~~gt~~y~aPE~~~~  170 (323)
T cd05575         152 TTSTFCGTPEYLAPEVLRK  170 (323)
T ss_pred             ccccccCChhhcChhhhcC
Confidence            2234467889999998764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.79  E-value=4.9e-19  Score=105.00  Aligned_cols=91  Identities=26%  Similarity=0.368  Sum_probs=75.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec--cc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--KA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~~   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+++++|+|+++.|+++    +..+.++++|||++....  ..
T Consensus        78 ~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~  151 (316)
T cd05619          78 LNGGDLMFHIQSCH--KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILL----DTDGHIKIADFGMCKENMLGDA  151 (316)
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE----CCCCCEEEccCCcceECCCCCC
Confidence            35789999997654  68889999999999999999999999999999999999    666789999999886532  22


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       152 ~~~~~~gt~~y~aPE~~~~  170 (316)
T cd05619         152 KTCTFCGTPDYIAPEILLG  170 (316)
T ss_pred             ceeeecCCccccCHHHHcC
Confidence            2234568889999998764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.79  E-value=4e-19  Score=105.74  Aligned_cols=91  Identities=26%  Similarity=0.377  Sum_probs=75.3

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+++++|+|+++.||++    +..+.++|.|||++.....  .
T Consensus        78 ~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili----~~~~~~kl~Dfg~~~~~~~~~~  151 (327)
T cd05617          78 VNGGDLMFHMQRQR--KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLL----DADGHIKLTDYGMCKEGLGPGD  151 (327)
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE----eCCCCEEEeccccceeccCCCC
Confidence            35789999887654  68999999999999999999999999999999999999    5667899999998864321  1


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       152 ~~~~~~gt~~y~aPE~~~~  170 (327)
T cd05617         152 TTSTFCGTPNYIAPEILRG  170 (327)
T ss_pred             ceecccCCcccCCHHHHCC
Confidence            2234568899999998754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.79  E-value=4.4e-19  Score=105.41  Aligned_cols=91  Identities=25%  Similarity=0.293  Sum_probs=75.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+++++|+|+++.|+++    +..+.++|.|||++......  
T Consensus        83 ~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill----~~~~~ikL~Dfg~~~~~~~~~~  156 (323)
T cd05615          83 VNGGDLMYHIQQVG--KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVML----DSEGHIKIADFGMCKEHMVDGV  156 (323)
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE----CCCCCEEEeccccccccCCCCc
Confidence            35789999987654  68999999999999999999999999999999999999    66678999999988753221  


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       157 ~~~~~~gt~~y~aPE~~~~  175 (323)
T cd05615         157 TTRTFCGTPDYIAPEIIAY  175 (323)
T ss_pred             cccCccCCccccCHHHHcC
Confidence            2234457889999998764

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.79  E-value=4.9e-19  Score=107.17  Aligned_cols=67  Identities=24%  Similarity=0.483  Sum_probs=60.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|+|||++.
T Consensus        83 ~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl----~~~g~~kL~DFGla~  149 (382)
T cd05625          83 IPGGDMMSLLIRMG--IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILI----DRDGHIKLTDFGLCT  149 (382)
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCCEEEeECCCCc
Confidence            45789999997654  68899999999999999999999999999999999999    667789999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.79  E-value=4.9e-19  Score=105.47  Aligned_cols=91  Identities=26%  Similarity=0.389  Sum_probs=75.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+++|.+++....  .+++..+..++.+++.|+.|+|+++++|+|+++.||++    +..+.++|+|||++.....  .
T Consensus        78 ~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili----~~~~~~kL~DfG~~~~~~~~~~  151 (329)
T cd05618          78 VNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL----DSEGHIKLTDYGMCKEGLRPGD  151 (329)
T ss_pred             CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE----CCCCCEEEeeCCccccccCCCC
Confidence            45789999887654  68999999999999999999999999999999999999    6677899999998864321  1


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       152 ~~~~~~gt~~y~aPE~~~~  170 (329)
T cd05618         152 TTSTFCGTPNYIAPEILRG  170 (329)
T ss_pred             ccccccCCccccCHHHHcC
Confidence            2234568899999998764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=4.8e-19  Score=107.06  Aligned_cols=67  Identities=25%  Similarity=0.475  Sum_probs=60.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||++.
T Consensus        83 ~~gg~L~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll----~~~~~~kl~DfGla~  149 (377)
T cd05629          83 LPGGDLMTMLIKYD--TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILI----DRGGHIKLSDFGLST  149 (377)
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE----CCCCCEEEeeccccc
Confidence            35899999997654  68899999999999999999999999999999999999    666789999999875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG4279|consensus

Probab=99.79  E-value=2.5e-19  Score=113.56  Aligned_cols=92  Identities=25%  Similarity=0.414  Sum_probs=79.5

Q ss_pred             CcchhHHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc-
Q psy11820          1 MLEQNLYDFLKQNKFSPL--PLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-   77 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l--~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-   77 (98)
                      ++||+|.++++. +|+++  .+++.-+|.+||+.|+.|||++.|+||||+..|+++.   ...+.+||+|||.+..+.. 
T Consensus       654 VPGGSLSsLLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN---TySGvlKISDFGTsKRLAgi  729 (1226)
T KOG4279|consen  654 VPGGSLSSLLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN---TYSGVLKISDFGTSKRLAGI  729 (1226)
T ss_pred             CCCCcHHHHHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe---eccceEEecccccchhhccC
Confidence            479999999865 57888  6888999999999999999999999999999999993   4577899999998876542 


Q ss_pred             -cccceecccccccCccccc
Q psy11820         78 -AVCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        78 -~~~~~~~~~~~~~~pe~~~   96 (98)
                       ....++.||.-|||||++-
T Consensus       730 nP~TETFTGTLQYMAPEvID  749 (1226)
T KOG4279|consen  730 NPCTETFTGTLQYMAPEVID  749 (1226)
T ss_pred             CccccccccchhhhChHhhc
Confidence             3457889999999999975

>KOG0586|consensus

Probab=99.79  E-value=2.3e-19  Score=111.07  Aligned_cols=91  Identities=29%  Similarity=0.480  Sum_probs=81.3

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+|.+++|+....  .+.+.++..++.|++++++|||+++++|+|++.+|+++    +....++|+|||++..+... ..
T Consensus       138 ~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL----~~~mnikIaDfgfS~~~~~~~~l  211 (596)
T KOG0586|consen  138 SGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL----DENMNIKIADFGFSTFFDYGLML  211 (596)
T ss_pred             cCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc----ccccceeeeccccceeecccccc
Confidence            5789999999765  67779999999999999999999999999999999999    77778999999999887643 45


Q ss_pred             ceecccccccCcccccCC
Q psy11820         81 NTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~~   98 (98)
                      ++++|++.|.|||++.|.
T Consensus       212 qt~cgsppyAaPEl~~g~  229 (596)
T KOG0586|consen  212 QTFCGSPPYAAPELFNGK  229 (596)
T ss_pred             cccCCCCCccChHhhcCc
Confidence            889999999999998763

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=5e-19  Score=105.84  Aligned_cols=90  Identities=30%  Similarity=0.525  Sum_probs=75.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++....  .++...+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|.|||++.......  
T Consensus        84 ~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll----~~~~~~kL~Dfg~~~~~~~~~~~  157 (350)
T cd05573          84 PGGDLMNLLIRKD--VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI----DADGHIKLADFGLCKKMNKAKDR  157 (350)
T ss_pred             CCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE----CCCCCEEeecCCCCccCcccCcc
Confidence            5789999998653  68999999999999999999999999999999999999    667789999999886543221  


Q ss_pred             -----------------------------cceecccccccCcccccC
Q psy11820         80 -----------------------------CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 -----------------------------~~~~~~~~~~~~pe~~~~   97 (98)
                                                   .....+++.|+|||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  204 (350)
T cd05573         158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG  204 (350)
T ss_pred             cccccccccccccccccccccccccccccccccccCccccCHHHHcC
Confidence                                         233467889999998765

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.79  E-value=6e-19  Score=106.82  Aligned_cols=67  Identities=24%  Similarity=0.474  Sum_probs=60.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|+|||++.
T Consensus        83 ~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili----~~~~~~kL~DFGl~~  149 (381)
T cd05626          83 IPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILI----DLDGHIKLTDFGLCT  149 (381)
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEE----CCCCCEEEeeCcCCc
Confidence            35889999998654  68899999999999999999999999999999999999    666789999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.79  E-value=7.8e-19  Score=106.09  Aligned_cols=67  Identities=22%  Similarity=0.444  Sum_probs=59.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|.|||++.
T Consensus        83 ~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill----~~~~~ikL~DFG~a~  149 (376)
T cd05598          83 IPGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI----DRDGHIKLTDFGLCT  149 (376)
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEE----CCCCCEEEEeCCCCc
Confidence            35789999997654  68889999999999999999999999999999999999    666789999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0597|consensus

Probab=99.79  E-value=4.7e-19  Score=109.93  Aligned_cols=89  Identities=31%  Similarity=0.515  Sum_probs=78.1

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      -|+|++++...+  .++++.+..++.++++|+.|||+++|+|+|++|+||++    ...+.+|+.|||+++-.+..  ..
T Consensus        84 ~g~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl----~~~~~~KlcdFg~Ar~m~~~t~vl  157 (808)
T KOG0597|consen   84 VGDLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL----EKGGTLKLCDFGLARAMSTNTSVL  157 (808)
T ss_pred             hhhHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee----cCCCceeechhhhhhhcccCceee
Confidence            469999998765  79999999999999999999999999999999999999    67778999999999876542  33


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....|||.|||||...+
T Consensus       158 tsikGtPlYmAPElv~e  174 (808)
T KOG0597|consen  158 TSIKGTPLYMAPELVEE  174 (808)
T ss_pred             eeccCcccccCHHHHcC
Confidence            55679999999998765

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.79  E-value=1.2e-18  Score=103.51  Aligned_cols=91  Identities=32%  Similarity=0.419  Sum_probs=74.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+++|.+++....  .+.+..+..++.|++.|+.|+|+++++|+|+++.||++    +..+.++|+|||++.....  .
T Consensus        82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~  155 (323)
T cd05584          82 LSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL----DAQGHVKLTDFGLCKESIHEGT  155 (323)
T ss_pred             CCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----CCCCCEEEeeCcCCeecccCCC
Confidence            35789999997654  67888899999999999999999999999999999999    6677899999998864322  1


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       156 ~~~~~~gt~~y~aPE~~~~  174 (323)
T cd05584         156 VTHTFCGTIEYMAPEILMR  174 (323)
T ss_pred             cccccCCCccccChhhccC
Confidence            2233468889999998754

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0032|consensus

Probab=99.79  E-value=1.1e-18  Score=105.57  Aligned_cols=93  Identities=32%  Similarity=0.503  Sum_probs=80.3

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .||+|++.+...   .+++..+..++.+++.++.|||+.+++|+|++|+|+++.........+++.|||++...... ..
T Consensus       119 ~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~  195 (382)
T KOG0032|consen  119 EGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERL  195 (382)
T ss_pred             CCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceE
Confidence            579999988765   29999999999999999999999999999999999999765544568999999999877653 34


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ...+||+.|+|||++.+
T Consensus       196 ~~~~Gtp~y~APEvl~~  212 (382)
T KOG0032|consen  196 HTIVGTPEYVAPEVLGG  212 (382)
T ss_pred             eeecCCccccCchhhcC
Confidence            66789999999999863

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.78  E-value=9.6e-19  Score=102.29  Aligned_cols=91  Identities=31%  Similarity=0.514  Sum_probs=75.0

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-ccc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCN   81 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~   81 (98)
                      +++|.+++.......+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.++++|||++...... ...
T Consensus        92 ~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~~  167 (290)
T cd07862          92 DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV----TSSGQIKLADFGLARIYSFQMALT  167 (290)
T ss_pred             CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE----cCCCCEEEccccceEeccCCcccc
Confidence            4678888876554468899999999999999999999999999999999999    66678999999998765432 223


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...+++.|+|||++.+
T Consensus       168 ~~~~~~~y~aPE~~~~  183 (290)
T cd07862         168 SVVVTLWYRAPEVLLQ  183 (290)
T ss_pred             cccccccccChHHHhC
Confidence            4467889999998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.78  E-value=9.6e-19  Score=103.84  Aligned_cols=91  Identities=26%  Similarity=0.305  Sum_probs=74.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+++|.+++....  .+++..+..++.+++.|+.|||+++++|+|+++.||++    +..+.++|+|||++.....  .
T Consensus        78 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill----~~~~~~kL~Dfg~~~~~~~~~~  151 (321)
T cd05591          78 VNGGDLMFQIQRSR--KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL----DAEGHCKLADFGMCKEGILNGV  151 (321)
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE----CCCCCEEEeecccceecccCCc
Confidence            35789999887654  68899999999999999999999999999999999999    6677899999998865322  1


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       152 ~~~~~~gt~~y~aPE~~~~  170 (321)
T cd05591         152 TTTTFCGTPDYIAPEILQE  170 (321)
T ss_pred             cccccccCccccCHHHHcC
Confidence            2234567889999998754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0585|consensus

Probab=99.78  E-value=2.3e-19  Score=109.04  Aligned_cols=76  Identities=30%  Similarity=0.466  Sum_probs=65.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc-------cccceeccccccc
Q psy11820         18 LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-------AVCNTYLQSRYYR   90 (98)
Q Consensus        18 l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~~~~~   90 (98)
                      +++.+++.|++.++.||.|||.++|+||||+|.|+++    ...+.+||+|||.+.....       .......|||.|+
T Consensus       207 ls~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl----~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~  282 (576)
T KOG0585|consen  207 LSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLL----SSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFF  282 (576)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEE----cCCCcEEeeccceeeecccCCccccHHHHhhcCCCcccc
Confidence            8899999999999999999999999999999999999    6678999999998875521       1223467999999


Q ss_pred             CcccccC
Q psy11820         91 APEIILG   97 (98)
Q Consensus        91 ~pe~~~~   97 (98)
                      |||.+.+
T Consensus       283 APE~c~~  289 (576)
T KOG0585|consen  283 APELCSG  289 (576)
T ss_pred             chHhhcC
Confidence            9999876

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.78  E-value=8.9e-19  Score=103.93  Aligned_cols=91  Identities=27%  Similarity=0.350  Sum_probs=74.3

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+||++.||++    +..+.++|.|||++.....  .
T Consensus        78 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~~~~~~~~~~  151 (321)
T cd05603          78 VNGGELFFHLQRER--CFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL----DSQGHVVLTDFGLCKEGVEPEE  151 (321)
T ss_pred             CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE----CCCCCEEEccCCCCccCCCCCC
Confidence            35789988887654  68888999999999999999999999999999999999    6677899999998764321  1


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       152 ~~~~~~gt~~y~aPE~~~~  170 (321)
T cd05603         152 TTSTFCGTPEYLAPEVLRK  170 (321)
T ss_pred             ccccccCCcccCCHHHhcC
Confidence            2234567889999998754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG3653|consensus

Probab=99.78  E-value=9.7e-19  Score=106.11  Aligned_cols=89  Identities=26%  Similarity=0.444  Sum_probs=75.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH---------cCCcccCCCCCcEEEecCCCCCccEEEeeecCc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ---------LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA   72 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~---------~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~   72 (98)
                      .+|+|.+|+..+   .+++.....++..++.|++|||+         -.|+|||++++|+++    .......|+|||++
T Consensus       291 ~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv----K~DlTccIaDFGLA  363 (534)
T KOG3653|consen  291 PKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV----KNDLTCCIADFGLA  363 (534)
T ss_pred             cCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE----ccCCcEEeecccee
Confidence            479999999875   59999999999999999999996         358999999999999    67778999999999


Q ss_pred             eeecccc----cceecccccccCcccccC
Q psy11820         73 SHVSKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        73 ~~~~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      ..+....    .-...||.+|||||++-|
T Consensus       364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEg  392 (534)
T KOG3653|consen  364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEG  392 (534)
T ss_pred             EEecCCCCCcchhhhhhhhhhcCHHHHhh
Confidence            8875321    223579999999999865

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.78  E-value=1.2e-18  Score=103.34  Aligned_cols=91  Identities=27%  Similarity=0.413  Sum_probs=75.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|.|||++......  
T Consensus        80 ~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kL~Dfg~~~~~~~~~~  153 (318)
T cd05582          80 LRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL----DEEGHIKLTDFGLSKESIDHEK  153 (318)
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEE----CCCCcEEEeeccCCcccCCCCC
Confidence            35789999987654  68999999999999999999999999999999999999    66678999999988754322  


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       154 ~~~~~~g~~~y~aPE~~~~  172 (318)
T cd05582         154 KAYSFCGTVEYMAPEVVNR  172 (318)
T ss_pred             ceecccCChhhcCHHHHcC
Confidence            2234567889999998754

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0193|consensus

Probab=99.78  E-value=3e-19  Score=110.83  Aligned_cols=90  Identities=28%  Similarity=0.382  Sum_probs=74.3

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec----c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS----K   77 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~----~   77 (98)
                      .|.+|+.+++-.+ ..|.....+.+++|++.|+.|||.++|||+|++..||++    .....++|.|||++..-.    .
T Consensus       470 eGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl----~~~~kVkIgDFGLatvk~~w~g~  544 (678)
T KOG0193|consen  470 EGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL----HEDLKVKIGDFGLATVKTRWSGE  544 (678)
T ss_pred             cCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE----ccCCcEEEecccceeeeeeeccc
Confidence            4778999997554 358888999999999999999999999999999999999    666789999999886432    2


Q ss_pred             cccceecccccccCccccc
Q psy11820         78 AVCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        78 ~~~~~~~~~~~~~~pe~~~   96 (98)
                      .......++..|||||++.
T Consensus       545 ~q~~qp~gsilwmAPEvIR  563 (678)
T KOG0193|consen  545 QQLEQPHGSLLWMAPEVIR  563 (678)
T ss_pred             cccCCCccchhhhcHHHHh
Confidence            2234456777899999975

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.77  E-value=2e-18  Score=107.22  Aligned_cols=93  Identities=27%  Similarity=0.370  Sum_probs=75.6

Q ss_pred             CcchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc
Q psy11820          1 MLEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~   78 (98)
                      +.+|+|.+++...  ....+++..+..++.|++.|+.|+|+.+++|+||++.||++    +..+.++|+|||++......
T Consensus       147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll----~~~~~~kL~DFgla~~~~~~  222 (478)
T PTZ00267        147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFL----MPTGIIKLGDFGFSKQYSDS  222 (478)
T ss_pred             CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEE----CCCCcEEEEeCcCceecCCc
Confidence            3588999887542  23358888999999999999999999999999999999999    66678999999998765432


Q ss_pred             ----ccceecccccccCcccccC
Q psy11820         79 ----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ----~~~~~~~~~~~~~pe~~~~   97 (98)
                          ......|++.|+|||++.+
T Consensus       223 ~~~~~~~~~~gt~~y~aPE~~~~  245 (478)
T PTZ00267        223 VSLDVASSFCGTPYYLAPELWER  245 (478)
T ss_pred             cccccccccCCCccccCHhHhCC
Confidence                1234568899999998754

>KOG4721|consensus

Probab=99.77  E-value=3.5e-19  Score=110.79  Aligned_cols=91  Identities=26%  Similarity=0.421  Sum_probs=77.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc-ccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-AVC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~~~   80 (98)
                      ..|-|++.++...  .++.+.+.....+|+.|+.|||.+.|||||++..||+|    .....+||+|||.+..... +..
T Consensus       195 a~GqL~~VLka~~--~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLI----s~~d~VKIsDFGTS~e~~~~STk  268 (904)
T KOG4721|consen  195 AQGQLYEVLKAGR--PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILI----SYDDVVKISDFGTSKELSDKSTK  268 (904)
T ss_pred             ccccHHHHHhccC--ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEe----eccceEEeccccchHhhhhhhhh
Confidence            4578999998755  78999999999999999999999999999999999999    4445899999999876543 334


Q ss_pred             ceecccccccCcccccCC
Q psy11820         81 NTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~~   98 (98)
                      ..++||..|||||++..+
T Consensus       269 MSFaGTVaWMAPEvIrne  286 (904)
T KOG4721|consen  269 MSFAGTVAWMAPEVIRNE  286 (904)
T ss_pred             hhhhhhHhhhCHHHhhcC
Confidence            678899999999998753

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.77  E-value=2.2e-18  Score=102.74  Aligned_cols=91  Identities=24%  Similarity=0.449  Sum_probs=75.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      +.+|+|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|+++.|+++    +..+.++|.|||++....... 
T Consensus        83 ~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill----~~~~~~kl~DfG~a~~~~~~~~  157 (331)
T cd05624          83 YVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLL----DMNGHIRLADFGSCLKMNQDGT  157 (331)
T ss_pred             CCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEE----cCCCCEEEEeccceeeccCCCc
Confidence            35899999997642 258899999999999999999999999999999999999    666789999999987654321 


Q ss_pred             --cceecccccccCccccc
Q psy11820         80 --CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 --~~~~~~~~~~~~pe~~~   96 (98)
                        .....+++.|+|||++.
T Consensus       158 ~~~~~~~gt~~y~aPE~~~  176 (331)
T cd05624         158 VQSSVAVGTPDYISPEILQ  176 (331)
T ss_pred             eeeccccCCcccCCHHHHh
Confidence              12345889999999875

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.77  E-value=2.2e-18  Score=100.57  Aligned_cols=90  Identities=27%  Similarity=0.335  Sum_probs=75.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.++++|||++........
T Consensus        79 ~~~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~----~~~~~~~l~dfg~~~~~~~~~~  152 (279)
T cd05633          79 MNGGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL----DEHGHVRISDLGLACDFSKKKP  152 (279)
T ss_pred             CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEE----CCCCCEEEccCCcceeccccCc
Confidence            45789999987654  68999999999999999999999999999999999999    6667899999998875543333


Q ss_pred             ceecccccccCccccc
Q psy11820         81 NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~   96 (98)
                      ....++..|+|||.+.
T Consensus       153 ~~~~~~~~y~aPE~~~  168 (279)
T cd05633         153 HASVGTHGYMAPEVLQ  168 (279)
T ss_pred             cCcCCCcCccCHHHhc
Confidence            3446788999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0579|consensus

Probab=99.77  E-value=9.8e-19  Score=110.20  Aligned_cols=91  Identities=25%  Similarity=0.379  Sum_probs=75.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec--ccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--KAV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~~~   79 (98)
                      .||-.+..+-..+ ..|++..+..+++++++|+.|||+++|||||++..||++    ...+.++++|||.+....  ...
T Consensus       112 ~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~----TldGdirLADFGVSAKn~~t~qk  186 (1187)
T KOG0579|consen  112 GGGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILL----TLDGDIRLADFGVSAKNKSTRQK  186 (1187)
T ss_pred             CCchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEE----EecCcEeeecccccccchhHHhh
Confidence            3555556555543 368999999999999999999999999999999999999    778899999999776542  234


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .-++.|||+|||||+.+.
T Consensus       187 RDsFIGTPYWMAPEVvmC  204 (1187)
T KOG0579|consen  187 RDSFIGTPYWMAPEVVMC  204 (1187)
T ss_pred             hccccCCcccccchheee
Confidence            467899999999999764

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.77  E-value=2e-18  Score=100.65  Aligned_cols=90  Identities=26%  Similarity=0.320  Sum_probs=75.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.++++|||++........
T Consensus        79 ~~g~~L~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili----~~~~~~kl~dfg~~~~~~~~~~  152 (278)
T cd05606          79 MNGGDLHYHLSQHG--VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL----DEHGHVRISDLGLACDFSKKKP  152 (278)
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEE----CCCCCEEEccCcCccccCccCC
Confidence            35789999887654  68999999999999999999999999999999999999    5666899999998876543333


Q ss_pred             ceecccccccCccccc
Q psy11820         81 NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~   96 (98)
                      ....++..|+|||++.
T Consensus       153 ~~~~~~~~y~aPE~~~  168 (278)
T cd05606         153 HASVGTHGYMAPEVLQ  168 (278)
T ss_pred             cCcCCCcCCcCcHHhc
Confidence            3456788999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.77  E-value=2.9e-18  Score=104.32  Aligned_cols=89  Identities=28%  Similarity=0.409  Sum_probs=73.1

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc---cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK---AV   79 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---~~   79 (98)
                      +++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    ...+.++|+|||++.....   ..
T Consensus       166 ~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll----~~~~~vkL~DFG~a~~~~~~~~~~  239 (391)
T PHA03212        166 KTDLYCYLAAKR--NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFI----NHPGDVCLGDFGAACFPVDINANK  239 (391)
T ss_pred             CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEE----cCCCCEEEEeCCcccccccccccc
Confidence            467888887654  68899999999999999999999999999999999999    6667899999999864321   12


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       240 ~~~~~gt~~y~aPE~~~~  257 (391)
T PHA03212        240 YYGWAGTIATNAPELLAR  257 (391)
T ss_pred             cccccCccCCCChhhhcC
Confidence            234568999999998754

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=2.4e-18  Score=102.58  Aligned_cols=91  Identities=27%  Similarity=0.474  Sum_probs=74.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      +.+++|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|+++.||++    ...+.++|.|||++....... 
T Consensus        83 ~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~~~  157 (331)
T cd05597          83 YVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLL----DKNGHIRLADFGSCLRLLADGT  157 (331)
T ss_pred             CCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEE----CCCCCEEEEECCceeecCCCCC
Confidence            35899999997532 358899999999999999999999999999999999999    667789999999886543221 


Q ss_pred             --cceecccccccCccccc
Q psy11820         80 --CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 --~~~~~~~~~~~~pe~~~   96 (98)
                        .....+++.|+|||++.
T Consensus       158 ~~~~~~~gt~~y~aPE~~~  176 (331)
T cd05597         158 VQSNVAVGTPDYISPEILQ  176 (331)
T ss_pred             ccccceeccccccCHHHHh
Confidence              12245889999999875

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.77  E-value=3.5e-18  Score=99.72  Aligned_cols=93  Identities=26%  Similarity=0.345  Sum_probs=74.7

Q ss_pred             CcchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc
Q psy11820          1 MLEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~   78 (98)
                      |.+++|.+++...  ....+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||++......
T Consensus        75 ~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~~l~dfg~~~~~~~~  150 (280)
T cd05608          75 MNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL----DNDGNVRISDLGLAVELKDG  150 (280)
T ss_pred             CCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEeeCccceecCCC
Confidence            4578998877532  23368999999999999999999999999999999999999    66678999999988765332


Q ss_pred             --ccceecccccccCcccccC
Q psy11820         79 --VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~~   97 (98)
                        ......+++.|+|||++.+
T Consensus       151 ~~~~~~~~g~~~y~aPE~~~~  171 (280)
T cd05608         151 QSKTKGYAGTPGFMAPELLQG  171 (280)
T ss_pred             CccccccCCCcCccCHHHhcC
Confidence              1233467889999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.77  E-value=2.3e-18  Score=102.13  Aligned_cols=91  Identities=23%  Similarity=0.296  Sum_probs=75.2

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.|+++    +..+.+++.|||++.....  .
T Consensus        78 ~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~~~  151 (318)
T cd05570          78 VNGGDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL----DSEGHIKIADFGMCKEGILGGV  151 (318)
T ss_pred             CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE----CCCCcEEecccCCCeecCcCCC
Confidence            35789999887654  68999999999999999999999999999999999999    6667899999998865321  1


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       152 ~~~~~~g~~~y~aPE~~~~  170 (318)
T cd05570         152 TTSTFCGTPDYIAPEILSY  170 (318)
T ss_pred             cccceecCccccCHHHhcC
Confidence            2234467889999998764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.77  E-value=2.4e-18  Score=102.36  Aligned_cols=91  Identities=24%  Similarity=0.449  Sum_probs=75.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      +.+++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|+|||++....... 
T Consensus        83 ~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll----~~~~~~kL~Dfg~a~~~~~~~~  157 (330)
T cd05601          83 QPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI----DRTGHIKLADFGSAARLTANKM  157 (330)
T ss_pred             CCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEE----CCCCCEEeccCCCCeECCCCCc
Confidence            35889999998652 368999999999999999999999999999999999999    667789999999987653321 


Q ss_pred             --cceecccccccCccccc
Q psy11820         80 --CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 --~~~~~~~~~~~~pe~~~   96 (98)
                        .....+++.|+|||++.
T Consensus       158 ~~~~~~~gt~~y~aPE~~~  176 (330)
T cd05601         158 VNSKLPVGTPDYIAPEVLT  176 (330)
T ss_pred             eeeecccCCccccCHHHhc
Confidence              12335788999999875

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=5.3e-18  Score=99.20  Aligned_cols=93  Identities=20%  Similarity=0.238  Sum_probs=75.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+++|.+++.......++++.+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||++...... .
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~~l~Dfg~~~~~~~~~~  157 (285)
T cd05605          82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL----DDYGHIRISDLGLAVEIPEGET  157 (285)
T ss_pred             cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEE----CCCCCEEEeeCCCceecCCCCc
Confidence            357899988876544468999999999999999999999999999999999999    66678999999988764322 1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       158 ~~~~~~~~~y~aPE~~~~  175 (285)
T cd05605         158 IRGRVGTVGYMAPEVVKN  175 (285)
T ss_pred             cccccCCCCccCcHHhcC
Confidence            223457889999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.76  E-value=3e-18  Score=106.84  Aligned_cols=92  Identities=28%  Similarity=0.321  Sum_probs=75.6

Q ss_pred             cchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-
Q psy11820          2 LEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-   78 (98)
Q Consensus         2 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-   78 (98)
                      .+|+|.+++...  ....+++..+..++.|++.|+.|+|+.+++|+|++|.||++    ...+.++|+|||++...... 
T Consensus       122 ~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl----~~~~~vkL~DFGls~~~~~~~  197 (496)
T PTZ00283        122 NAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL----CSNGLVKLGDFGFSKMYAATV  197 (496)
T ss_pred             CCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE----eCCCCEEEEecccCeeccccc
Confidence            578999988643  23468899999999999999999999999999999999999    66678999999998764321 


Q ss_pred             ---ccceecccccccCcccccC
Q psy11820         79 ---VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ---~~~~~~~~~~~~~pe~~~~   97 (98)
                         ......+++.|+|||++.+
T Consensus       198 ~~~~~~~~~Gt~~Y~aPE~~~~  219 (496)
T PTZ00283        198 SDDVGRTFCGTPYYVAPEIWRR  219 (496)
T ss_pred             cccccccccCCcceeCHHHhCC
Confidence               2234568899999998764

>KOG0610|consensus

Probab=99.76  E-value=4.4e-18  Score=101.92  Aligned_cols=69  Identities=28%  Similarity=0.321  Sum_probs=64.3

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      ++||+|...........++++.+++|+.+++.||.|||-.||+.||++|+||++    ...+.+.|+||.++.
T Consensus       159 CpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv----redGHIMLsDFDLS~  227 (459)
T KOG0610|consen  159 CPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV----REDGHIMLSDFDLSL  227 (459)
T ss_pred             CCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE----ecCCcEEeeeccccc
Confidence            579999999998888889999999999999999999999999999999999999    788899999998763

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.76  E-value=3.9e-18  Score=101.93  Aligned_cols=88  Identities=31%  Similarity=0.611  Sum_probs=73.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++...   .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    ...+.++++|||++...... ..
T Consensus       102 ~~~~l~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~----~~~~~~kl~Dfg~~~~~~~~-~~  173 (343)
T cd07878         102 MGADLNNIVKCQ---KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAV----NEDCELRILDFGLARQADDE-MT  173 (343)
T ss_pred             CCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEE----CCCCCEEEcCCccceecCCC-cC
Confidence            367788877532   58999999999999999999999999999999999999    66778999999998765332 23


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...+++.|+|||++.+
T Consensus       174 ~~~~t~~y~aPE~~~~  189 (343)
T cd07878         174 GYVATRWYRAPEIMLN  189 (343)
T ss_pred             CccccccccCchHhcC
Confidence            4467889999998754

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.76  E-value=5.2e-18  Score=101.19  Aligned_cols=77  Identities=30%  Similarity=0.337  Sum_probs=61.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc----cceecccccccCc
Q psy11820         17 PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV----CNTYLQSRYYRAP   92 (98)
Q Consensus        17 ~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~----~~~~~~~~~~~~p   92 (98)
                      .++...+..++.|++.|+.|+|+++++|+|+++.||++    +..+.++++|||++.......    .....+++.|+||
T Consensus       170 ~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~----~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  245 (338)
T cd05102         170 PLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILL----SENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAP  245 (338)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEE----cCCCcEEEeecccccccccCcchhcccCCCCCccccCc
Confidence            36778888999999999999999999999999999999    566789999999987543211    1122345679999


Q ss_pred             ccccC
Q psy11820         93 EIILG   97 (98)
Q Consensus        93 e~~~~   97 (98)
                      |++.+
T Consensus       246 E~~~~  250 (338)
T cd05102         246 ESIFD  250 (338)
T ss_pred             HHhhc
Confidence            98754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.76  E-value=3.6e-18  Score=101.83  Aligned_cols=91  Identities=25%  Similarity=0.435  Sum_probs=74.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      +.+|+|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.++|.|||++....... 
T Consensus        83 ~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili----~~~~~~kL~DfG~a~~~~~~~~  157 (332)
T cd05623          83 YVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM----DMNGHIRLADFGSCLKLMEDGT  157 (332)
T ss_pred             cCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE----CCCCCEEEeecchheecccCCc
Confidence            35789999997642 258889999999999999999999999999999999999    666789999999886543211 


Q ss_pred             --cceecccccccCccccc
Q psy11820         80 --CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 --~~~~~~~~~~~~pe~~~   96 (98)
                        .....|++.|+|||++.
T Consensus       158 ~~~~~~~gt~~y~aPE~~~  176 (332)
T cd05623         158 VQSSVAVGTPDYISPEILQ  176 (332)
T ss_pred             ceecccccCccccCHHHHh
Confidence              12346889999999875

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.76  E-value=2.3e-18  Score=102.51  Aligned_cols=88  Identities=33%  Similarity=0.509  Sum_probs=72.9

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc----
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----   78 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~----   78 (98)
                      +++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|+|||++......    
T Consensus        87 ~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll----~~~~~~kL~Dfg~~~~~~~~~~~~  160 (338)
T cd07859          87 ESDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA----NADCKLKICDFGLARVAFNDTPTA  160 (338)
T ss_pred             CCCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----CCCCcEEEccCccccccccccCcc
Confidence            578888887654  68999999999999999999999999999999999999    66778999999998754211    


Q ss_pred             -ccceecccccccCccccc
Q psy11820         79 -VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~   96 (98)
                       ......+++.|+|||++.
T Consensus       161 ~~~~~~~~t~~y~aPE~~~  179 (338)
T cd07859         161 IFWTDYVATRWYRAPELCG  179 (338)
T ss_pred             ccccCCCCCCCcCCHHHHh
Confidence             112346788999999864

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.76  E-value=5.4e-18  Score=100.30  Aligned_cols=95  Identities=31%  Similarity=0.517  Sum_probs=73.1

Q ss_pred             chhHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820          3 EQNLYDFLKQNK-------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus         3 ~~~L~~~~~~~~-------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      +++|.+++....       ...++...+..++.|++.|+.|||+.+++|+|+++.||++.......+.++++|||++...
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~  162 (317)
T cd07868          83 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  162 (317)
T ss_pred             CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence            457777765321       2247888999999999999999999999999999999999554445568999999998765


Q ss_pred             ccc-----ccceecccccccCcccccC
Q psy11820         76 SKA-----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        76 ~~~-----~~~~~~~~~~~~~pe~~~~   97 (98)
                      ...     ......+++.|+|||++.+
T Consensus       163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~  189 (317)
T cd07868         163 NSPLKPLADLDPVVVTFWYRAPELLLG  189 (317)
T ss_pred             CCCCccccccCCccccccccCCHHHcC
Confidence            321     1223467889999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0662|consensus

Probab=99.76  E-value=2.6e-18  Score=94.23  Aligned_cols=91  Identities=25%  Similarity=0.493  Sum_probs=78.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      ++.+|.+|..... +.++.+.+.+++.|++.|+.|||+++++|||++|.|.++    ..++.++++|||+++-++...  
T Consensus        83 cdqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli----n~ngelkladfglarafgipvrc  157 (292)
T KOG0662|consen   83 CDQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI----NRNGELKLADFGLARAFGIPVRC  157 (292)
T ss_pred             hhHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe----ccCCcEEecccchhhhcCCceEe
Confidence            4678888887653 569999999999999999999999999999999999999    888899999999998776542  


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      ......|.||.+|.++.|
T Consensus       158 ysaevvtlwyrppdvlfg  175 (292)
T KOG0662|consen  158 YSAEVVTLWYRPPDVLFG  175 (292)
T ss_pred             eeceeeeeeccCcceeee
Confidence            344567889999999876

>KOG0577|consensus

Probab=99.76  E-value=1.4e-18  Score=108.61  Aligned_cols=86  Identities=40%  Similarity=0.580  Sum_probs=71.2

Q ss_pred             hhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccccee
Q psy11820          4 QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTY   83 (98)
Q Consensus         4 ~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~   83 (98)
                      |+-.|++.-.+ .++.+-++..+..+.+.|++|||+.+.|||||+..||++    ...+.++++|||.+....  ...++
T Consensus       110 GSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILL----se~g~VKLaDFGSAsi~~--PAnsF  182 (948)
T KOG0577|consen  110 GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILL----SEPGLVKLADFGSASIMA--PANSF  182 (948)
T ss_pred             ccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEe----cCCCeeeeccccchhhcC--chhcc
Confidence            34445554332 268888999999999999999999999999999999999    667799999999886543  34688


Q ss_pred             cccccccCccccc
Q psy11820         84 LQSRYYRAPEIIL   96 (98)
Q Consensus        84 ~~~~~~~~pe~~~   96 (98)
                      +|||+|||||++.
T Consensus       183 vGTPywMAPEVIL  195 (948)
T KOG0577|consen  183 VGTPYWMAPEVIL  195 (948)
T ss_pred             cCCccccchhHhe
Confidence            9999999999986

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.76  E-value=5.1e-18  Score=99.97  Aligned_cols=90  Identities=27%  Similarity=0.517  Sum_probs=72.9

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      +++|.+++.... ..++++.+..++.|++.|+.|+|+.+++|+|+++.||++    ...+.++++|||++......  ..
T Consensus        86 ~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~~~~~  160 (303)
T cd07869          86 HTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI----SDTGELKLADFGLARAKSVPSHTY  160 (303)
T ss_pred             CcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCCEEECCCCcceeccCCCccC
Confidence            567888886543 358889999999999999999999999999999999999    66778999999988654321  22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       161 ~~~~~~~~y~aPE~~~~  177 (303)
T cd07869         161 SNEVVTLWYRPPDVLLG  177 (303)
T ss_pred             CCCcccCCCCChHHHcC
Confidence            33457888999998754

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.76  E-value=5.8e-18  Score=100.91  Aligned_cols=91  Identities=29%  Similarity=0.516  Sum_probs=75.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~   79 (98)
                      +.+++|.+++....  .+++..+..++.+++.|+.|+|+. +++|+|+++.||++    ...+.+++.|||++.......
T Consensus        85 ~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~  158 (331)
T cd06649          85 MDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSM  158 (331)
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEE----cCCCcEEEccCcccccccccc
Confidence            35789999998654  688999999999999999999986 59999999999999    666789999999887654433


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       159 ~~~~~g~~~y~aPE~~~~  176 (331)
T cd06649         159 ANSFVGTRSYMSPERLQG  176 (331)
T ss_pred             cccCCCCcCcCCHhHhcC
Confidence            344568889999998764

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.76  E-value=5.7e-18  Score=98.89  Aligned_cols=91  Identities=34%  Similarity=0.518  Sum_probs=73.9

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-CN   81 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~   81 (98)
                      .++|.+++.......+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.++++|||++....... ..
T Consensus        90 ~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili----~~~~~~kl~dfg~~~~~~~~~~~~  165 (288)
T cd07863          90 DQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV----TSGGQVKLADFGLARIYSCQMALT  165 (288)
T ss_pred             ccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCCEEECccCccccccCcccCC
Confidence            3578888876544458999999999999999999999999999999999999    666789999999887654321 12


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...++..|+|||++.+
T Consensus       166 ~~~~~~~y~aPE~~~~  181 (288)
T cd07863         166 PVVVTLWYRAPEVLLQ  181 (288)
T ss_pred             CccccccccCchHhhC
Confidence            3456788999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.76  E-value=3.9e-18  Score=101.35  Aligned_cols=90  Identities=20%  Similarity=0.216  Sum_probs=73.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+++|..++...   .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|.|||++.....  .
T Consensus        84 ~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill----~~~~~~kL~Dfg~~~~~~~~~~  156 (324)
T cd05589          84 AAGGDLMMHIHTD---VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL----DTEGFVKIADFGLCKEGMGFGD  156 (324)
T ss_pred             CCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE----CCCCcEEeCcccCCccCCCCCC
Confidence            3578888887643   58999999999999999999999999999999999999    6677899999998764321  1


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       157 ~~~~~~g~~~y~aPE~~~~  175 (324)
T cd05589         157 RTSTFCGTPEFLAPEVLTE  175 (324)
T ss_pred             cccccccCccccCHhHhcC
Confidence            2234568899999998764

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.75  E-value=7.9e-18  Score=98.13  Aligned_cols=92  Identities=21%  Similarity=0.288  Sum_probs=74.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-C   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~   80 (98)
                      .+++|.+++.......+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +....+++.|||++....... .
T Consensus        76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili----~~~~~~~l~Dfg~~~~~~~~~~~  151 (277)
T cd05607          76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLL----DDQGNCRLSDLGLAVELKDGKTI  151 (277)
T ss_pred             CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEE----cCCCCEEEeeceeeeecCCCcee
Confidence            57899988876554458888999999999999999999999999999999999    666789999999887654321 1


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       152 ~~~~~~~~y~aPE~~~~  168 (277)
T cd05607         152 TQRAGTNGYMAPEILKE  168 (277)
T ss_pred             eccCCCCCccCHHHHcc
Confidence            23457789999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0201|consensus

Probab=99.75  E-value=8.2e-19  Score=105.46  Aligned_cols=91  Identities=32%  Similarity=0.427  Sum_probs=77.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      |.+|++.+.+....  .+.+..+..++++++.|+.|+|..+.+|+||++.|+++    ...+.+++.|||.+......  
T Consensus        93 ~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~----s~~g~vkl~DfgVa~ql~~~~~  166 (467)
T KOG0201|consen   93 CGGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILL----SESGDVKLADFGVAGQLTNTVK  166 (467)
T ss_pred             hcCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhcceecccccccceeE----eccCcEEEEecceeeeeechhh
Confidence            45788888887654  55788888889999999999999999999999999999    55579999999998876543  


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ...++.|||+|||||++.+
T Consensus       167 rr~tfvGTPfwMAPEVI~~  185 (467)
T KOG0201|consen  167 RRKTFVGTPFWMAPEVIKQ  185 (467)
T ss_pred             ccccccccccccchhhhcc
Confidence            3478899999999999875

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.75  E-value=6.5e-18  Score=98.88  Aligned_cols=93  Identities=24%  Similarity=0.265  Sum_probs=75.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+++|.+++.......+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||++...... .
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~----~~~~~~~l~Dfg~~~~~~~~~~  157 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILL----DDHGHIRISDLGLAVHVPEGQT  157 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE----CCCCCEEEeeccceeecCCCcc
Confidence            357899998876544468899999999999999999999999999999999999    66678999999988654322 1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++..|+|||++.+
T Consensus       158 ~~~~~g~~~y~aPE~~~~  175 (285)
T cd05630         158 IKGRVGTVGYMAPEVVKN  175 (285)
T ss_pred             ccCCCCCccccChHHHcC
Confidence            223467889999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG2052|consensus

Probab=99.75  E-value=5.9e-18  Score=102.21  Aligned_cols=89  Identities=24%  Similarity=0.377  Sum_probs=74.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH--------cCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ--------LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~--------~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      .+|||+||+.+.   +++.+....++..+++|+++||-        -.|.|||+++.||++    ..++.+.|+|+|++.
T Consensus       292 e~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV----Kkn~~C~IADLGLAv  364 (513)
T KOG2052|consen  292 EHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV----KKNGTCCIADLGLAV  364 (513)
T ss_pred             cCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE----ccCCcEEEeeceeeE
Confidence            579999999874   69999999999999999999995        248999999999999    777899999999997


Q ss_pred             eeccc------ccceecccccccCcccccC
Q psy11820         74 HVSKA------VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        74 ~~~~~------~~~~~~~~~~~~~pe~~~~   97 (98)
                      .....      .....+||++|||||++-.
T Consensus       365 ~h~~~t~~idi~~N~rVGTKRYMAPEvLde  394 (513)
T KOG2052|consen  365 RHDSDTDTIDIPPNPRVGTKRYMAPEVLDE  394 (513)
T ss_pred             EecccCCcccCCCCCccceeeccChHHhhh
Confidence            64321      2234579999999999853

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.75  E-value=1.1e-17  Score=97.82  Aligned_cols=92  Identities=21%  Similarity=0.227  Sum_probs=75.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+++|.+++.......+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +....+++.|||++...... ..
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili----~~~~~~kl~Dfg~~~~~~~~~~~  158 (285)
T cd05632          83 NGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILL----DDYGHIRISDLGLAVKIPEGESI  158 (285)
T ss_pred             cCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE----CCCCCEEEecCCcceecCCCCcc
Confidence            56889888876544468999999999999999999999999999999999999    55668999999988654322 22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....++..|+|||++.+
T Consensus       159 ~~~~g~~~~~aPE~~~~  175 (285)
T cd05632         159 RGRVGTVGYMAPEVLNN  175 (285)
T ss_pred             cCCCCCcCccChHHhcC
Confidence            33467889999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0194|consensus

Probab=99.75  E-value=3.7e-18  Score=104.87  Aligned_cols=91  Identities=25%  Similarity=0.224  Sum_probs=73.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.||+|.+|+...+. .++..+...++.+.+.|++|||+++++||||.++|+++    .....+|++|||+++....- .
T Consensus       243 ~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~----~~~~~vKISDFGLs~~~~~~~~  317 (474)
T KOG0194|consen  243 CNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLY----SKKGVVKISDFGLSRAGSQYVM  317 (474)
T ss_pred             cCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHhee----cCCCeEEeCccccccCCcceee
Confidence            578999999987753 58899999999999999999999999999999999999    55556899999998754311 1


Q ss_pred             cc-eecccccccCccccc
Q psy11820         80 CN-TYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~-~~~~~~~~~~pe~~~   96 (98)
                      .. ...-+..|+|||.+.
T Consensus       318 ~~~~~klPirWLAPEtl~  335 (474)
T KOG0194|consen  318 KKFLKKLPIRWLAPETLN  335 (474)
T ss_pred             ccccccCcceecChhhhc
Confidence            11 112346799999875

>KOG4645|consensus

Probab=99.74  E-value=4.4e-18  Score=112.58  Aligned_cols=91  Identities=30%  Similarity=0.416  Sum_probs=77.2

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+|+|.+.+....  ..++...+.+..|++.|++|||+.||+|||+++.||++    +.++.+|..|||.+..+...  
T Consensus      1316 C~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~L----d~~g~iK~~DFGsa~ki~~~~~ 1389 (1509)
T KOG4645|consen 1316 CEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILL----DFNGLIKYGDFGSAVKIKNNAQ 1389 (1509)
T ss_pred             hccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceee----ecCCcEEeecccceeEecCchh
Confidence            35789999887543  56777888899999999999999999999999999999    77889999999999876432  


Q ss_pred             ----ccceecccccccCcccccC
Q psy11820         79 ----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ----~~~~~~~~~~~~~pe~~~~   97 (98)
                          ..+...||+.|||||++.|
T Consensus      1390 ~~~~el~~~~GT~~YMAPEvit~ 1412 (1509)
T KOG4645|consen 1390 TMPGELQSMMGTPMYMAPEVITG 1412 (1509)
T ss_pred             cCCHHHHhhcCCchhcCchhhcc
Confidence                2356689999999999875

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.74  E-value=1.1e-17  Score=98.01  Aligned_cols=90  Identities=24%  Similarity=0.513  Sum_probs=72.6

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      .++|.+++.... ..++...+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.++++|||++......  ..
T Consensus        86 ~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~----~~~~~~kl~DfG~~~~~~~~~~~~  160 (288)
T cd07871          86 DSDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLI----NEKGELKLADFGLARAKSVPTKTY  160 (288)
T ss_pred             CcCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE----CCCCCEEECcCcceeeccCCCccc
Confidence            468888886543 257888999999999999999999999999999999999    66678999999988754321  22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       161 ~~~~~~~~y~aPE~~~~  177 (288)
T cd07871         161 SNEVVTLWYRPPDVLLG  177 (288)
T ss_pred             cCceecccccChHHhcC
Confidence            33456888999998754

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.74  E-value=9.3e-18  Score=100.17  Aligned_cols=91  Identities=26%  Similarity=0.497  Sum_probs=74.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~   79 (98)
                      +.+++|.+++....  .+++..+..++.+++.|+.|+|+. +++|+|+++.|+++    +..+.+++.|||++.......
T Consensus        85 ~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili----~~~~~~kL~Dfg~~~~~~~~~  158 (333)
T cd06650          85 MDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSM  158 (333)
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEE----cCCCCEEEeeCCcchhhhhhc
Confidence            35789999998654  688899999999999999999985 79999999999999    666689999999886543333


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++..|+|||.+.+
T Consensus       159 ~~~~~~~~~y~aPE~~~~  176 (333)
T cd06650         159 ANSFVGTRSYMSPERLQG  176 (333)
T ss_pred             cccCCCCccccCHHHhcC
Confidence            334567889999998764

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.74  E-value=8.6e-18  Score=102.21  Aligned_cols=89  Identities=30%  Similarity=0.527  Sum_probs=73.4

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc----
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----   78 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~----   78 (98)
                      +++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+||++.||++    ...+.++|.|||++......    
T Consensus       169 ~~~l~~~l~~~~--~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill----~~~~~~~l~DfG~a~~~~~~~~~~  242 (392)
T PHA03207        169 KCDLFTYVDRSG--PLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL----DEPENAVLGDFGAACKLDAHPDTP  242 (392)
T ss_pred             CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE----cCCCCEEEccCccccccCcccccc
Confidence            467888885443  68999999999999999999999999999999999999    66678999999988654322    


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       243 ~~~~~~gt~~y~aPE~~~~  261 (392)
T PHA03207        243 QCYGWSGTLETNSPELLAL  261 (392)
T ss_pred             cccccccccCccCHhHhcC
Confidence            1224568899999998764

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.74  E-value=1.2e-17  Score=100.45  Aligned_cols=90  Identities=28%  Similarity=0.399  Sum_probs=73.4

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc-cccc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-AVCN   81 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~~~~   81 (98)
                      .++|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|+++.||++    .....++++|||.+..... ....
T Consensus       140 ~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill----~~~~~~kl~DfG~a~~~~~~~~~~  214 (357)
T PHA03209        140 SSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI----NDVDQVCIGDLGAAQFPVVAPAFL  214 (357)
T ss_pred             CCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCCEEEecCccccccccCcccc
Confidence            568888886543 368999999999999999999999999999999999999    6667899999998864322 1223


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...+++.|+|||++.+
T Consensus       215 ~~~gt~~y~aPE~~~~  230 (357)
T PHA03209        215 GLAGTVETNAPEVLAR  230 (357)
T ss_pred             cccccccccCCeecCC
Confidence            4567889999998764

>KOG4250|consensus

Probab=99.74  E-value=1.2e-17  Score=105.16  Aligned_cols=96  Identities=26%  Similarity=0.373  Sum_probs=82.0

Q ss_pred             CcchhHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-
Q psy11820          1 MLEQNLYDFLKQNK-FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-   78 (98)
                      +.+|||...+.+-+ ...|++.+++.+...+..|+.|||+++|+||||+|.||++....+.....||.|||.++.+... 
T Consensus        99 C~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s  178 (732)
T KOG4250|consen   99 CSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS  178 (732)
T ss_pred             cCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC
Confidence            46899999997432 3369999999999999999999999999999999999999776656667799999999987643 


Q ss_pred             ccceecccccccCccccc
Q psy11820         79 VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~   96 (98)
                      ...+..||..|++||..-
T Consensus       179 ~~~S~vGT~~YLhPel~E  196 (732)
T KOG4250|consen  179 LFTSLVGTEEYLHPELYE  196 (732)
T ss_pred             eeeeecCchhhcChHHHh
Confidence            567788999999999764

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.74  E-value=1.2e-17  Score=102.90  Aligned_cols=91  Identities=33%  Similarity=0.552  Sum_probs=70.9

Q ss_pred             chhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCC-ccEEEeeecCceeeccc-
Q psy11820          3 EQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP-YRVKVIDFGSASHVSKA-   78 (98)
Q Consensus         3 ~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~-~~~~l~~~g~~~~~~~~-   78 (98)
                      .++|.+++...  ....++...+..++.|++.|+.|||+.+++|||+++.||++    +.. ..++|+|||++...... 
T Consensus       150 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl----~~~~~~vkL~DFGla~~~~~~~  225 (440)
T PTZ00036        150 PQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLI----DPNTHTLKLCDFGSAKNLLAGQ  225 (440)
T ss_pred             CccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEE----cCCCCceeeeccccchhccCCC
Confidence            35676766431  23468899999999999999999999999999999999999    433 36899999998765322 


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       226 ~~~~~~~t~~y~aPE~~~~  244 (440)
T PTZ00036        226 RSVSYICSRFYRAPELMLG  244 (440)
T ss_pred             CcccCCCCcCccCHHHhcC
Confidence            2234567889999998754

>PTZ00284 protein kinase; Provisional

Probab=99.74  E-value=1.1e-17  Score=103.72  Aligned_cols=93  Identities=31%  Similarity=0.565  Sum_probs=72.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCC------------CCccEEEee
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVR------------QPYRVKVID   68 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~------------~~~~~~l~~   68 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|||+ .+|+|+||++.||++.....            ....++|.|
T Consensus       214 ~g~~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~D  291 (467)
T PTZ00284        214 YGPCLLDWIMKHG--PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICD  291 (467)
T ss_pred             cCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECC
Confidence            3678889887654  68999999999999999999998 59999999999999954221            112589999


Q ss_pred             ecCceeecccccceecccccccCcccccC
Q psy11820         69 FGSASHVSKAVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        69 ~g~~~~~~~~~~~~~~~~~~~~~pe~~~~   97 (98)
                      ||.+..... ......+++.|+|||++.+
T Consensus       292 fG~~~~~~~-~~~~~~gt~~Y~APE~~~~  319 (467)
T PTZ00284        292 LGGCCDERH-SRTAIVSTRHYRSPEVVLG  319 (467)
T ss_pred             CCccccCcc-ccccccCCccccCcHHhhc
Confidence            997654322 2234568899999999865

>KOG0671|consensus

Probab=99.74  E-value=2.7e-17  Score=97.69  Aligned_cols=96  Identities=44%  Similarity=0.713  Sum_probs=79.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecC----------------CCCCccE
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDP----------------VRQPYRV   64 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~----------------~~~~~~~   64 (98)
                      ++|-|++++++.+.+.+++...++.+++|++.++.+||+.+++|.|++|+||++...                ...+..+
T Consensus       172 llG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I  251 (415)
T KOG0671|consen  172 LLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAI  251 (415)
T ss_pred             ccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcce
Confidence            467799999999888889999999999999999999999999999999999987321                1124568


Q ss_pred             EEeeecCceeecccccceecccccccCcccccC
Q psy11820         65 KVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        65 ~l~~~g~~~~~~~~~~~~~~~~~~~~~pe~~~~   97 (98)
                      ++.|||.+..-.. ...+...|..|.|||+++|
T Consensus       252 ~vIDFGsAtf~~e-~hs~iVsTRHYRAPEViLg  283 (415)
T KOG0671|consen  252 KVIDFGSATFDHE-HHSTIVSTRHYRAPEVILG  283 (415)
T ss_pred             EEEecCCcceecc-CcceeeeccccCCchheec
Confidence            8999998865432 2356677889999999875

>KOG1152|consensus

Probab=99.74  E-value=5e-18  Score=105.51  Aligned_cols=90  Identities=30%  Similarity=0.525  Sum_probs=79.5

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccce
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT   82 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~   82 (98)
                      +-+|++++..+.  .+++.++..+++|++.|+.+||+.+|+||||+-+|+.+    +.++.+++.|||.+...-....-.
T Consensus       654 gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv----d~~g~~klidfgsaa~~ksgpfd~  727 (772)
T KOG1152|consen  654 GIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV----DSNGFVKLIDFGSAAYTKSGPFDV  727 (772)
T ss_pred             CcchhhhhhccC--ccchHHHHHHHHHHHhccccccccCceecccccccEEE----ecCCeEEEeeccchhhhcCCCcce
Confidence            568999998876  79999999999999999999999999999999999999    888899999999876544444456


Q ss_pred             ecccccccCcccccCC
Q psy11820         83 YLQSRYYRAPEIILGE   98 (98)
Q Consensus        83 ~~~~~~~~~pe~~~~~   98 (98)
                      +.||..|.|||++.|+
T Consensus       728 f~gtv~~aapevl~g~  743 (772)
T KOG1152|consen  728 FVGTVDYAAPEVLGGE  743 (772)
T ss_pred             eeeeccccchhhhCCC
Confidence            7899999999999874

>KOG0690|consensus

Probab=99.73  E-value=1.1e-18  Score=102.73  Aligned_cols=89  Identities=25%  Similarity=0.336  Sum_probs=77.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--AV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~   79 (98)
                      .||.|+-++.+.+  .+++...++|..+|++|+.|||+++|+.||++..|.++    +..+.++|.|||++..-..  ..
T Consensus       251 nGGeLf~HLsrer--~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL----DkDGHIKitDFGLCKE~I~~g~t  324 (516)
T KOG0690|consen  251 NGGELFFHLSRER--VFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL----DKDGHIKITDFGLCKEEIKYGDT  324 (516)
T ss_pred             cCceEeeehhhhh--cccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee----ccCCceEeeecccchhcccccce
Confidence            4788888887765  78999999999999999999999999999999999999    8888999999999875322  23


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      ..+++|||.|+|||++-
T Consensus       325 ~kTFCGTPEYLAPEVle  341 (516)
T KOG0690|consen  325 TKTFCGTPEYLAPEVLE  341 (516)
T ss_pred             eccccCChhhcCchhhc
Confidence            46889999999999975

>KOG1095|consensus

Probab=99.73  E-value=6.3e-18  Score=110.56  Aligned_cols=92  Identities=23%  Similarity=0.334  Sum_probs=75.3

Q ss_pred             CcchhHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820          1 MLEQNLYDFLKQNK-----FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus         1 ~~~~~L~~~~~~~~-----~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      |.+|+|..|++..+     ...++...+..++.+|+.|+.||++++++||||..+|+++    +.+..+|++|||+++..
T Consensus       777 M~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL----~~~r~VKIaDFGlArDi  852 (1025)
T KOG1095|consen  777 MEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLL----DERRVVKIADFGLARDI  852 (1025)
T ss_pred             cccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheee----cccCcEEEcccchhHhh
Confidence            78999999998762     2247899999999999999999999999999999999999    56678999999999854


Q ss_pred             ccccc----ceecccccccCccccc
Q psy11820         76 SKAVC----NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        76 ~~~~~----~~~~~~~~~~~pe~~~   96 (98)
                      .....    .....+..|||||.+.
T Consensus       853 y~~~yyr~~~~a~lPvkWm~PEsl~  877 (1025)
T KOG1095|consen  853 YDKDYYRKHGEAMLPVKWMPPESLK  877 (1025)
T ss_pred             hhchheeccCccccceecCCHHHHh
Confidence            32211    1223446799999986

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.73  E-value=2.7e-17  Score=96.90  Aligned_cols=93  Identities=20%  Similarity=0.315  Sum_probs=71.1

Q ss_pred             CcchhHHHHHhhCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCcc
Q psy11820          1 MLEQNLYDFLKQNK-----------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR   63 (98)
Q Consensus         1 ~~~~~L~~~~~~~~-----------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~   63 (98)
                      +.+++|.+++....                 ...+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill----~~~~~  176 (304)
T cd05096         101 MENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLV----GENLT  176 (304)
T ss_pred             CCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEE----cCCcc
Confidence            35788999886432                 1235677889999999999999999999999999999999    66678


Q ss_pred             EEEeeecCceeecccc----cceecccccccCcccccC
Q psy11820         64 VKVIDFGSASHVSKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        64 ~~l~~~g~~~~~~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      ++++|||++.......    .....++..|+|||++.+
T Consensus       177 ~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  214 (304)
T cd05096         177 IKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM  214 (304)
T ss_pred             EEECCCccceecccCceeEecCcCCCCccccCHHHHhc
Confidence            9999999987543221    112234567999998653

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.73  E-value=2.8e-17  Score=95.29  Aligned_cols=91  Identities=31%  Similarity=0.532  Sum_probs=75.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++.......+++..+..++.|++.|+.|||+++++|+|+++.|+++    .....+++.|||++......  .
T Consensus        92 ~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili----~~~~~~~l~Dfg~~~~~~~~~~~  167 (272)
T cd06637          92 GAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL----TENAEVKLVDFGVSAQLDRTVGR  167 (272)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEE----CCCCCEEEccCCCceeccccccc
Confidence            46899999987555568899999999999999999999999999999999999    66678999999998754321  2


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....++..|+|||++.
T Consensus       168 ~~~~~g~~~y~aPE~~~  184 (272)
T cd06637         168 RNTFIGTPYWMAPEVIA  184 (272)
T ss_pred             CCcccccccccCHhHhc
Confidence            23456778899999874

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.73  E-value=5.3e-17  Score=93.39  Aligned_cols=92  Identities=29%  Similarity=0.431  Sum_probs=75.3

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++.......+++..+..++.+++.|+.++|+.+++|+|+++.|+++    +..+.+++.|||.+......  .
T Consensus        83 ~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~----~~~~~~~l~df~~~~~~~~~~~~  158 (257)
T cd08223          83 EGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFL----TRTNIIKVGDLGIARVLENQCDM  158 (257)
T ss_pred             CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEE----ecCCcEEEecccceEEecccCCc
Confidence            46889999987554568999999999999999999999999999999999999    56678999999988765321  1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       159 ~~~~~~~~~y~aPE~~~~  176 (257)
T cd08223         159 ASTLIGTPYYMSPELFSN  176 (257)
T ss_pred             cccccCCcCccChhHhcC
Confidence            233456788999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.73  E-value=2.3e-17  Score=102.15  Aligned_cols=90  Identities=28%  Similarity=0.475  Sum_probs=73.5

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc----
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----   78 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~----   78 (98)
                      .++|.+++.... ..+++..+..++.|++.||.|+|+.+++|+||++.||++    ...+.++|+|||++......    
T Consensus       243 ~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl----~~~~~vkL~DFGla~~~~~~~~~~  317 (461)
T PHA03211        243 RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLV----NGPEDICLGDFGAACFARGSWSTP  317 (461)
T ss_pred             CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEE----CCCCCEEEcccCCceecccccccc
Confidence            467888886543 368999999999999999999999999999999999999    66678999999998764322    


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|++||++.+
T Consensus       318 ~~~~~~GT~~Y~APE~~~~  336 (461)
T PHA03211        318 FHYGIAGTVDTNAPEVLAG  336 (461)
T ss_pred             cccccCCCcCCcCHHHHcC
Confidence            1123458899999998764

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.72  E-value=3.8e-17  Score=94.12  Aligned_cols=91  Identities=24%  Similarity=0.288  Sum_probs=73.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++.......+++..+..++.+++.|++|+|+++++|+|+++.|+++    +..+.+++.|||++....... .
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~----~~~~~~kl~dfg~~~~~~~~~-~  157 (256)
T cd05082          83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV----SEDNVAKVSDFGLTKEASSTQ-D  157 (256)
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEE----cCCCcEEecCCccceeccccC-C
Confidence            46899999987654458889999999999999999999999999999999999    667789999999887543211 2


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ....+..|+|||++.+
T Consensus       158 ~~~~~~~y~aPE~~~~  173 (256)
T cd05082         158 TGKLPVKWTAPEALRE  173 (256)
T ss_pred             CCccceeecCHHHHcc
Confidence            2233457999998643

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG0666|consensus

Probab=99.72  E-value=2.1e-17  Score=96.77  Aligned_cols=93  Identities=32%  Similarity=0.558  Sum_probs=74.4

Q ss_pred             hHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          5 NLYDFLKQ---NKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         5 ~L~~~~~~---~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      +|...++-   .+...++...+.+++.|+++|+.|||++=++|||++|.||++-......+.+||+|+|+++.+....  
T Consensus       113 DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkp  192 (438)
T KOG0666|consen  113 DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKP  192 (438)
T ss_pred             hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccc
Confidence            45555542   2233578899999999999999999999999999999999996655567899999999998765432  


Q ss_pred             ---cceecccccccCcccccC
Q psy11820         80 ---CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ---~~~~~~~~~~~~pe~~~~   97 (98)
                         .-....|.||.|||.+.|
T Consensus       193 l~s~d~VVVTiWYRAPELLLG  213 (438)
T KOG0666|consen  193 LASLDPVVVTIWYRAPELLLG  213 (438)
T ss_pred             cccCCceEEEEEecChHHhcc
Confidence               123467889999999886

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.72  E-value=4.2e-17  Score=98.53  Aligned_cols=89  Identities=30%  Similarity=0.563  Sum_probs=71.8

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---c
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---V   79 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---~   79 (98)
                      +++|.+++....  .++...+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|.|||++......   .
T Consensus        87 ~~~l~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili----~~~~~~kL~Dfg~a~~~~~~~~~~  160 (372)
T cd07853          87 QSDLHKIIVSPQ--PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV----NSNCVLKICDFGLARVEEPDESKH  160 (372)
T ss_pred             ccCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE----CCCCCEEeccccceeecccCcccc
Confidence            457777776543  68999999999999999999999999999999999999    66778999999988754321   1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       161 ~~~~~~~~~y~aPE~~~~  178 (372)
T cd07853         161 MTQEVVTQYYRAPEILMG  178 (372)
T ss_pred             CCCCCcCCCcCCHHHHcC
Confidence            122346788999998764

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.72  E-value=4.6e-17  Score=96.45  Aligned_cols=92  Identities=25%  Similarity=0.337  Sum_probs=72.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+|+|.+++.... ..++...+..++.|++.|+.|||+.+++|+|+++.|+++    .....++++|||++........
T Consensus        90 ~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill----~~~~~~kl~DfG~a~~~~~~~~  164 (316)
T cd05108          90 MPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGADEK  164 (316)
T ss_pred             CCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEe----cCCCcEEEccccccccccCCCc
Confidence            46789999997653 257888899999999999999999999999999999999    5666899999999876542211


Q ss_pred             ----ceecccccccCcccccC
Q psy11820         81 ----NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ----~~~~~~~~~~~pe~~~~   97 (98)
                          .....+..|++||.+.+
T Consensus       165 ~~~~~~~~~~~~y~apE~~~~  185 (316)
T cd05108         165 EYHAEGGKVPIKWMALESILH  185 (316)
T ss_pred             ceeccCCccceeecChHHhcc
Confidence                11123457999998753

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0984|consensus

Probab=99.72  E-value=3.3e-17  Score=91.27  Aligned_cols=92  Identities=30%  Similarity=0.453  Sum_probs=74.7

Q ss_pred             cchhHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc
Q psy11820          2 LEQNLYDFLKQ--NKFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         2 ~~~~L~~~~~~--~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~   78 (98)
                      ++.||..+-+.  ..++.+++..+-.++..++.|+.|||+ ..++|||++|.|+++    +..+.+|+.|||++-.+..+
T Consensus       127 M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI----n~~GqVKiCDFGIsG~L~dS  202 (282)
T KOG0984|consen  127 MDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI----NYDGQVKICDFGISGYLVDS  202 (282)
T ss_pred             hhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE----ccCCcEEEcccccceeehhh
Confidence            34556655432  234578898999999999999999998 579999999999999    77889999999999888776


Q ss_pred             ccce-ecccccccCcccccC
Q psy11820         79 VCNT-YLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~-~~~~~~~~~pe~~~~   97 (98)
                      ...+ -.|...|||||.+-.
T Consensus       203 iAkt~daGCkpYmaPEri~~  222 (282)
T KOG0984|consen  203 IAKTMDAGCKPYMAPERINP  222 (282)
T ss_pred             hHHHHhcCCCccCChhhcCc
Confidence            5554 567788999998754

>KOG0587|consensus

Probab=99.72  E-value=4.1e-17  Score=104.74  Aligned_cols=93  Identities=30%  Similarity=0.503  Sum_probs=82.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +-+||.-|+++......+.+..+..++++++.|+++||.+.++|||++-.||++    ...+.+++.|||.+..+..  .
T Consensus       103 C~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLL----T~e~~VKLvDFGvSaQldsT~g  178 (953)
T KOG0587|consen  103 CGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLL----TENAEVKLVDFGVSAQLDSTVG  178 (953)
T ss_pred             cCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEE----eccCcEEEeeeeeeeeeecccc
Confidence            357899999987777788999999999999999999999999999999999999    7778999999999887654  3


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ...++.|||.|||||++..
T Consensus       179 rRnT~iGtP~WMAPEViac  197 (953)
T KOG0587|consen  179 RRNTFIGTPYWMAPEVIAC  197 (953)
T ss_pred             cccCcCCCcccccceeeec
Confidence            5578899999999999864

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.72  E-value=5.9e-17  Score=95.24  Aligned_cols=87  Identities=32%  Similarity=0.429  Sum_probs=66.9

Q ss_pred             hHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc------
Q psy11820          5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA------   78 (98)
Q Consensus         5 ~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~------   78 (98)
                      ++.+.+....  ..++..+..++.|++.|+.|+|+.+++|||++|.|+++    +....++++|||++......      
T Consensus       112 ~~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill----~~~~~~~l~DFGla~~~~~~~~~~~~  185 (294)
T PHA02882        112 NTKEIFKRIK--CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV----DGNNRGYIIDYGIASHFIIHGKHIEY  185 (294)
T ss_pred             CHHHHHHhhc--cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCcEEEEEcCCceeeccCCccccc
Confidence            4445554322  35677888999999999999999999999999999999    55668999999998765311      


Q ss_pred             ---ccceecccccccCcccccC
Q psy11820         79 ---VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ---~~~~~~~~~~~~~pe~~~~   97 (98)
                         ......+++.|+|||++.+
T Consensus       186 ~~~~~~~~~gt~~y~ape~~~~  207 (294)
T PHA02882        186 SKEQKDLHRGTLYYAGLDAHNG  207 (294)
T ss_pred             ccccccccCCCccccCHHHhCC
Confidence               1122358899999998764

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.72  E-value=6.9e-17  Score=94.09  Aligned_cols=92  Identities=25%  Similarity=0.338  Sum_probs=72.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+|+|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|+++.|+++    .....++|.|||++........
T Consensus        90 ~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~----~~~~~~kL~dfG~~~~~~~~~~  164 (279)
T cd05109          90 MPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLV----KSPNHVKITDFGLARLLDIDET  164 (279)
T ss_pred             CCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE----cCCCcEEECCCCceeecccccc
Confidence            35789999987643 358899999999999999999999999999999999999    5556799999999876542211


Q ss_pred             ----ceecccccccCcccccC
Q psy11820         81 ----NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ----~~~~~~~~~~~pe~~~~   97 (98)
                          .....++.|++||.+.+
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~  185 (279)
T cd05109         165 EYHADGGKVPIKWMALESILH  185 (279)
T ss_pred             eeecCCCccchhhCCHHHhcc
Confidence                11123457999998753

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.72  E-value=5.6e-17  Score=94.76  Aligned_cols=77  Identities=31%  Similarity=0.637  Sum_probs=64.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---ccceecccccccCcc
Q psy11820         17 PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---VCNTYLQSRYYRAPE   93 (98)
Q Consensus        17 ~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---~~~~~~~~~~~~~pe   93 (98)
                      .+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||++......   ......+++.|+|||
T Consensus        96 ~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE  171 (287)
T cd07848          96 GVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLI----SHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPE  171 (287)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----cCCCcEEEeeccCcccccccccccccccccccccCCcH
Confidence            58899999999999999999999999999999999999    66678999999998765322   122346788999999


Q ss_pred             cccC
Q psy11820         94 IILG   97 (98)
Q Consensus        94 ~~~~   97 (98)
                      ++.+
T Consensus       172 ~~~~  175 (287)
T cd07848         172 LLLG  175 (287)
T ss_pred             HHcC
Confidence            8764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.72  E-value=7.1e-17  Score=92.92  Aligned_cols=94  Identities=22%  Similarity=0.201  Sum_probs=72.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCC---CCccEEEeeecCceeecc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR---QPYRVKVIDFGSASHVSK   77 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~---~~~~~~l~~~g~~~~~~~   77 (98)
                      +.+++|.+++..... .++...+..++.|++.|+.|+|+.+++|+|+++.|+++.....   ....+++.|||.+.....
T Consensus        82 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~  160 (259)
T cd05037          82 VKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS  160 (259)
T ss_pred             CCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc
Confidence            357899999976532 5888899999999999999999999999999999999943221   122689999998876433


Q ss_pred             cccceecccccccCcccccC
Q psy11820         78 AVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 ~~~~~~~~~~~~~~pe~~~~   97 (98)
                      .  ....++..|++||++.+
T Consensus       161 ~--~~~~~~~~y~aPE~~~~  178 (259)
T cd05037         161 R--EERVERIPWIAPECIRN  178 (259)
T ss_pred             c--cccccCCCccChhhhcC
Confidence            1  22334567999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.71  E-value=4.1e-17  Score=97.98  Aligned_cols=87  Identities=37%  Similarity=0.692  Sum_probs=69.6

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-ccc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCN   81 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~   81 (98)
                      +++|.+++..    .++...+..++.|++.|+.|||+.+++|+|+++.||++    ...+.++++|||++...... ...
T Consensus       105 ~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill----~~~~~~kl~Dfg~~~~~~~~~~~~  176 (355)
T cd07874         105 DANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAGTSFMMT  176 (355)
T ss_pred             cccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE----CCCCCEEEeeCcccccCCCccccC
Confidence            3456665542    47788889999999999999999999999999999999    66678999999998765432 223


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...+++.|+|||++.+
T Consensus       177 ~~~~t~~y~aPE~~~~  192 (355)
T cd07874         177 PYVVTRYYRAPEVILG  192 (355)
T ss_pred             CccccCCccCHHHHcC
Confidence            4567889999998764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.71  E-value=6.5e-17  Score=94.74  Aligned_cols=89  Identities=35%  Similarity=0.460  Sum_probs=74.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++....  .++...+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||++...... ..
T Consensus        84 ~~~~L~~~~~~~~--~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili----~~~~~~kl~dfg~~~~~~~~-~~  156 (290)
T cd05580          84 PGGELFSHLRKSG--RFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLL----DSDGYIKITDFGFAKRVKGR-TY  156 (290)
T ss_pred             CCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE----CCCCCEEEeeCCCccccCCC-CC
Confidence            4789999997654  68999999999999999999999999999999999999    66678999999988765433 23


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...+++.|++||.+.+
T Consensus       157 ~~~~~~~y~aPE~~~~  172 (290)
T cd05580         157 TLCGTPEYLAPEIILS  172 (290)
T ss_pred             CCCCCccccChhhhcC
Confidence            3457788999998753

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.71  E-value=8.9e-17  Score=93.78  Aligned_cols=91  Identities=22%  Similarity=0.277  Sum_probs=73.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      +.+|+|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +....++++|||.+....... 
T Consensus        90 ~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili----~~~~~~kl~Dfg~~~~~~~~~~  164 (279)
T cd05111          90 SPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILL----KSDSIVQIADFGVADLLYPDDK  164 (279)
T ss_pred             CCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE----cCCCcEEEcCCccceeccCCCc
Confidence            35789999997643 358899999999999999999999999999999999999    666789999999987543211 


Q ss_pred             ---cceecccccccCccccc
Q psy11820         80 ---CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ---~~~~~~~~~~~~pe~~~   96 (98)
                         .....++..|++||.+.
T Consensus       165 ~~~~~~~~~~~~y~~pE~~~  184 (279)
T cd05111         165 KYFYSEHKTPIKWMALESIL  184 (279)
T ss_pred             ccccCCCCCcccccCHHHhc
Confidence               12233556799999875

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.71  E-value=7.1e-17  Score=95.44  Aligned_cols=95  Identities=32%  Similarity=0.521  Sum_probs=71.9

Q ss_pred             chhHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820          3 EQNLYDFLKQN-------KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus         3 ~~~L~~~~~~~-------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      +++|.+++...       ....+++..+..++.|++.|+.|+|+.+++|+|+++.||++.......+.++|+|||++...
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~  162 (317)
T cd07867          83 EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  162 (317)
T ss_pred             CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence            45677766422       12247888899999999999999999999999999999999554345568999999998765


Q ss_pred             ccc-----ccceecccccccCcccccC
Q psy11820         76 SKA-----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        76 ~~~-----~~~~~~~~~~~~~pe~~~~   97 (98)
                      ...     ......+++.|+|||++.+
T Consensus       163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~  189 (317)
T cd07867         163 NSPLKPLADLDPVVVTFWYRAPELLLG  189 (317)
T ss_pred             CCCcccccccCcceecccccCcHHhcC
Confidence            322     1123457888999998754

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.71  E-value=1.2e-16  Score=92.02  Aligned_cols=92  Identities=28%  Similarity=0.388  Sum_probs=75.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++.......++.+.+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||.+......  .
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili----~~~~~~~l~dfg~~~~~~~~~~~  156 (255)
T cd08219          81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFL----TQNGKVKLGDFGSARLLTSPGAY  156 (255)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE----CCCCcEEEcccCcceeecccccc
Confidence            47889998876555568899999999999999999999999999999999999    66678999999988765432  1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       157 ~~~~~~~~~~~aPE~~~~  174 (255)
T cd08219         157 ACTYVGTPYYVPPEIWEN  174 (255)
T ss_pred             cccccCCccccCHHHHcc
Confidence            233457788999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.71  E-value=8.9e-17  Score=93.35  Aligned_cols=89  Identities=28%  Similarity=0.500  Sum_probs=74.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCc-cEEEeeecCceeecccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY-RVKVIDFGSASHVSKAV   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~-~~~l~~~g~~~~~~~~~   79 (98)
                      +.+++|.+++....  .++++.+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+ .+++.|||.+...... 
T Consensus        91 ~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~----~~~~~~~~l~dfg~~~~~~~~-  163 (267)
T PHA03390         91 IKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLY----DRAKDRIYLCDYGLCKIIGTP-  163 (267)
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE----eCCCCeEEEecCccceecCCC-
Confidence            35789999998764  78999999999999999999999999999999999999    4444 7999999988755332 


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                       ....++..|+|||++.+
T Consensus       164 -~~~~~~~~y~aPE~~~~  180 (267)
T PHA03390        164 -SCYDGTLDYFSPEKIKG  180 (267)
T ss_pred             -ccCCCCCcccChhhhcC
Confidence             23456788999998754

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.71  E-value=6.3e-17  Score=97.36  Aligned_cols=87  Identities=37%  Similarity=0.682  Sum_probs=69.1

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-ccc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCN   81 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~   81 (98)
                      +++|.+.+..    .++...+..++.|++.|+.|||+++++|+|+++.||++    ...+.++|+|||++...... ...
T Consensus       109 ~~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~----~~~~~~kl~Dfg~a~~~~~~~~~~  180 (359)
T cd07876         109 DANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTACTNFMMT  180 (359)
T ss_pred             CcCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE----CCCCCEEEecCCCccccccCccCC
Confidence            3556665532    47788899999999999999999999999999999999    66778999999998754322 223


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...+++.|+|||++.+
T Consensus       181 ~~~~t~~y~aPE~~~~  196 (359)
T cd07876         181 PYVVTRYYRAPEVILG  196 (359)
T ss_pred             CCcccCCCCCchhccC
Confidence            4467888999998764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.71  E-value=1e-16  Score=92.74  Aligned_cols=93  Identities=24%  Similarity=0.275  Sum_probs=73.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+++|.+++.......+++..+..++.|++.|+.|+|+++++|+|+++.|+++    ...+.+++.|||.+........
T Consensus        84 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~----~~~~~~kl~df~~~~~~~~~~~  159 (263)
T cd05052          84 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV----GENHLVKVADFGLSRLMTGDTY  159 (263)
T ss_pred             CCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE----cCCCcEEeCCCcccccccccee
Confidence            357899999976654568899999999999999999999999999999999999    6667899999998876533211


Q ss_pred             ---ceecccccccCcccccC
Q psy11820         81 ---NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ---~~~~~~~~~~~pe~~~~   97 (98)
                         .....+..|++||.+.+
T Consensus       160 ~~~~~~~~~~~y~aPE~~~~  179 (263)
T cd05052         160 TAHAGAKFPIKWTAPESLAY  179 (263)
T ss_pred             eccCCCCCccccCCHHHhcc
Confidence               11122456999998653

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0664|consensus

Probab=99.71  E-value=6e-18  Score=97.86  Aligned_cols=88  Identities=26%  Similarity=0.487  Sum_probs=70.6

Q ss_pred             hhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc---c
Q psy11820          4 QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV---C   80 (98)
Q Consensus         4 ~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~---~   80 (98)
                      .+|.+++-.  ...++..-+..+..||+.|+.|+|+.+|+||||+|.|.++    ..++.+||.|||+++.-....   .
T Consensus       141 SDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV----NSNCvLKICDFGLARvee~d~~~hM  214 (449)
T KOG0664|consen  141 SDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV----NSNCILKICDFGLARTWDQRDRLNM  214 (449)
T ss_pred             hhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe----ccCceEEecccccccccchhhhhhh
Confidence            355555543  3368888899999999999999999999999999999999    888999999999998643221   1


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      .....|.+|.|||+++|
T Consensus       215 TqEVVTQYYRAPEiLMG  231 (449)
T KOG0664|consen  215 THEVVTQYYRAPELLMG  231 (449)
T ss_pred             HHHHHHHHhccHHHhhc
Confidence            22345778999999987

>KOG0695|consensus

Probab=99.70  E-value=1.7e-17  Score=98.39  Aligned_cols=91  Identities=27%  Similarity=0.390  Sum_probs=78.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee-cc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV-SK-AV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~-~~   79 (98)
                      .||+|-.++.+.+  .++++-+++|..+|..|+.|||++||+.||++..|+++    +..+.+++.|+|.+... .. ..
T Consensus       334 ~ggdlmfhmqrqr--klpeeharfys~ei~lal~flh~rgiiyrdlkldnvll----daeghikltdygmcke~l~~gd~  407 (593)
T KOG0695|consen  334 NGGDLMFHMQRQR--KLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL----DAEGHIKLTDYGMCKEGLGPGDT  407 (593)
T ss_pred             cCcceeeehhhhh--cCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE----ccCCceeecccchhhcCCCCCcc
Confidence            5777777776655  79999999999999999999999999999999999999    66779999999987653 22 34


Q ss_pred             cceecccccccCcccccCC
Q psy11820         80 CNTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~~   98 (98)
                      ..+++|||.|.|||++.|+
T Consensus       408 tstfcgtpnyiapeilrge  426 (593)
T KOG0695|consen  408 TSTFCGTPNYIAPEILRGE  426 (593)
T ss_pred             cccccCCCcccchhhhccc
Confidence            5788999999999999875

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.70  E-value=8.6e-17  Score=95.04  Aligned_cols=90  Identities=28%  Similarity=0.491  Sum_probs=74.3

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      .+++|.+++....  .+++..+..++.+++.|+.|+|+ .+++|+|+++.|+++    +..+.++++|||.+........
T Consensus        82 ~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~~~~~  155 (308)
T cd06615          82 DGGSLDQVLKKAG--RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSMA  155 (308)
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEE----ecCCcEEEccCCCccccccccc
Confidence            4789999998654  68899999999999999999998 589999999999999    5566899999998765433333


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|++||.+.+
T Consensus       156 ~~~~~~~~~~aPE~~~~  172 (308)
T cd06615         156 NSFVGTRSYMSPERLQG  172 (308)
T ss_pred             ccCCCCcCccChhHhcC
Confidence            44567788999998754

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.70  E-value=1.7e-16  Score=91.21  Aligned_cols=92  Identities=29%  Similarity=0.430  Sum_probs=75.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++.......++...+..++.+++.|+.|+|+.+++|+|+++.||++    ...+.+++.|||.+......  .
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili----~~~~~~~l~df~~~~~~~~~~~~  157 (256)
T cd08529          82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFL----DAYDNVKIGDLGVAKLLSDNTNF  157 (256)
T ss_pred             CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE----eCCCCEEEcccccceeccCccch
Confidence            57899999987544468899999999999999999999999999999999999    55668999999988765332  1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       158 ~~~~~~~~~y~aPE~~~~  175 (256)
T cd08529         158 ANTIVGTPYYLSPELCED  175 (256)
T ss_pred             hhccccCccccCHHHhcC
Confidence            123456788999998753

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.70  E-value=1.9e-16  Score=91.43  Aligned_cols=92  Identities=24%  Similarity=0.307  Sum_probs=73.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++.......+++..+..++.+++.|+.++|+.+++|+|+++.|+++    ...+.++++|||++.........
T Consensus        84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~~l~dfg~~~~~~~~~~~  159 (261)
T cd05068          84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLV----GENNICKVADFGLARVIKEDIYE  159 (261)
T ss_pred             cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEE----cCCCCEEECCcceEEEccCCccc
Confidence            47899999976544468899999999999999999999999999999999999    66678999999988765432221


Q ss_pred             eecc---cccccCcccccC
Q psy11820         82 TYLQ---SRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~---~~~~~~pe~~~~   97 (98)
                      ...+   +..|+|||...+
T Consensus       160 ~~~~~~~~~~y~aPE~~~~  178 (261)
T cd05068         160 AREGAKFPIKWTAPEAALY  178 (261)
T ss_pred             ccCCCcCceeccCcccccc
Confidence            1122   346999997653

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG0696|consensus

Probab=99.70  E-value=3.4e-17  Score=99.14  Aligned_cols=89  Identities=26%  Similarity=0.319  Sum_probs=76.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee--cccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV--SKAV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~--~~~~   79 (98)
                      .||+|--.+.+-+  .+.+..+.+|+.+|+-|+.+||+++|+.||++..|+++    +..+.++|.|||++..-  ....
T Consensus       433 nGGDLMyhiQQ~G--kFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL----d~eGHiKi~DFGmcKEni~~~~T  506 (683)
T KOG0696|consen  433 NGGDLMYHIQQVG--KFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML----DSEGHIKIADFGMCKENIFDGVT  506 (683)
T ss_pred             cCchhhhHHHHhc--ccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe----ccCCceEeeecccccccccCCcc
Confidence            5778877776543  78889999999999999999999999999999999999    77789999999988753  2334


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      ..+++|||.|+|||++.
T Consensus       507 TkTFCGTPdYiAPEIi~  523 (683)
T KOG0696|consen  507 TKTFCGTPDYIAPEIIA  523 (683)
T ss_pred             eeeecCCCcccccceEE
Confidence            57889999999999975

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.70  E-value=1.2e-16  Score=96.79  Aligned_cols=77  Identities=26%  Similarity=0.316  Sum_probs=61.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc----ceecccccccCc
Q psy11820         17 PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC----NTYLQSRYYRAP   92 (98)
Q Consensus        17 ~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~----~~~~~~~~~~~p   92 (98)
                      .+++..+..++.|++.|+.|||+++++|+|+++.|+++    +....++|+|||++........    ....++..|+||
T Consensus       208 ~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~----~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aP  283 (374)
T cd05106         208 PLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLL----TDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAP  283 (374)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEE----eCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCH
Confidence            46778889999999999999999999999999999999    5566899999999875432211    122234579999


Q ss_pred             ccccC
Q psy11820         93 EIILG   97 (98)
Q Consensus        93 e~~~~   97 (98)
                      |++.+
T Consensus       284 E~~~~  288 (374)
T cd05106         284 ESIFD  288 (374)
T ss_pred             HHhcC
Confidence            98753

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.70  E-value=8.2e-17  Score=97.02  Aligned_cols=87  Identities=37%  Similarity=0.686  Sum_probs=70.0

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-CN   81 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~   81 (98)
                      +++|.+++..    .++...+..++.|++.|+.|+|+++++|+|+++.||++    ...+.++|+|||++....... ..
T Consensus       112 ~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kL~DfG~a~~~~~~~~~~  183 (364)
T cd07875         112 DANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAGTSFMMT  183 (364)
T ss_pred             CCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE----CCCCcEEEEeCCCccccCCCCccc
Confidence            4566666642    47788889999999999999999999999999999999    666789999999987654322 23


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...+++.|+|||++.+
T Consensus       184 ~~~~t~~y~aPE~~~~  199 (364)
T cd07875         184 PYVVTRYYRAPEVILG  199 (364)
T ss_pred             CCcccCCcCCHHHHhC
Confidence            4467889999998764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.70  E-value=1.4e-16  Score=92.01  Aligned_cols=93  Identities=24%  Similarity=0.321  Sum_probs=73.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+++|.+++.......++...+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||.+........
T Consensus        83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili----~~~~~~~l~dfg~~~~~~~~~~  158 (261)
T cd05072          83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV----SESLMCKIADFGLARVIEDNEY  158 (261)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEe----cCCCcEEECCCccceecCCCce
Confidence            357899999976544568888999999999999999999999999999999999    6667899999999876533211


Q ss_pred             ---ceecccccccCcccccC
Q psy11820         81 ---NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ---~~~~~~~~~~~pe~~~~   97 (98)
                         ....++..|+|||.+.+
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~  178 (261)
T cd05072         159 TAREGAKFPIKWTAPEAINF  178 (261)
T ss_pred             eccCCCccceecCCHHHhcc
Confidence               12234557999998653

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.70  E-value=1.2e-16  Score=92.56  Aligned_cols=88  Identities=27%  Similarity=0.452  Sum_probs=73.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++....  .+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+......  .
T Consensus        89 ~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili----~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd06645          89 GGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL----TDNGHVKLADFGVSAQITATIAK  162 (267)
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCCEEECcceeeeEccCcccc
Confidence            4689999987654  68999999999999999999999999999999999999    66678999999988654322  1


Q ss_pred             cceecccccccCcccc
Q psy11820         80 CNTYLQSRYYRAPEII   95 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~   95 (98)
                      .....+++.|+|||++
T Consensus       163 ~~~~~~~~~y~aPE~~  178 (267)
T cd06645         163 RKSFIGTPYWMAPEVA  178 (267)
T ss_pred             cccccCcccccChhhh
Confidence            1234577889999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.70  E-value=2.1e-16  Score=91.43  Aligned_cols=92  Identities=26%  Similarity=0.356  Sum_probs=73.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+++|.+++.......+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+........
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill----~~~~~~~L~dfg~~~~~~~~~~  157 (262)
T cd05071          82 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV----GENLVCKVADFGLARLIEDNEY  157 (262)
T ss_pred             CCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEE----cCCCcEEeccCCceeecccccc
Confidence            357899999976544457889999999999999999999999999999999999    5667899999998875533211


Q ss_pred             ---ceecccccccCccccc
Q psy11820         81 ---NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ---~~~~~~~~~~~pe~~~   96 (98)
                         ....++..|++||...
T Consensus       158 ~~~~~~~~~~~y~~PE~~~  176 (262)
T cd05071         158 TARQGAKFPIKWTAPEAAL  176 (262)
T ss_pred             ccccCCcccceecCHhHhc
Confidence               1223456799999764

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.70  E-value=1.7e-16  Score=91.54  Aligned_cols=91  Identities=25%  Similarity=0.311  Sum_probs=71.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++..... .++++.+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+.........
T Consensus        82 ~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i----~~~~~~kl~dfg~~~~~~~~~~~  156 (256)
T cd05059          82 ANGCLLNYLRERKG-KLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLV----GEDNVVKVSDFGLARYVLDDQYT  156 (256)
T ss_pred             CCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEE----CCCCcEEECCcccceeccccccc
Confidence            47899999976542 58899999999999999999999999999999999999    66678999999988754332111


Q ss_pred             ee---cccccccCcccccC
Q psy11820         82 TY---LQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~---~~~~~~~~pe~~~~   97 (98)
                      ..   ..+..|+|||.+.+
T Consensus       157 ~~~~~~~~~~y~~Pe~~~~  175 (256)
T cd05059         157 SSQGTKFPVKWAPPEVFDY  175 (256)
T ss_pred             ccCCCCCCccccCHHHhcc
Confidence            11   12346999998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.70  E-value=2e-16  Score=92.26  Aligned_cols=91  Identities=26%  Similarity=0.328  Sum_probs=71.4

Q ss_pred             cchhHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEe
Q psy11820          2 LEQNLYDFLKQNKF--------------SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI   67 (98)
Q Consensus         2 ~~~~L~~~~~~~~~--------------~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~   67 (98)
                      .+++|.+++.....              ..++...+..++.+++.|+.|||+++++|+|+++.|+++    ...+.++|+
T Consensus        91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~----~~~~~~~L~  166 (283)
T cd05048          91 AHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLV----GEGLTVKIS  166 (283)
T ss_pred             CCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEE----cCCCcEEEC
Confidence            46899999875421              347788899999999999999999999999999999999    666789999


Q ss_pred             eecCceeecccc----cceecccccccCccccc
Q psy11820         68 DFGSASHVSKAV----CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        68 ~~g~~~~~~~~~----~~~~~~~~~~~~pe~~~   96 (98)
                      |||++.......    .....+++.|+|||.+.
T Consensus       167 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (283)
T cd05048         167 DFGLSRDIYSADYYRVQSKSLLPVRWMPPEAIL  199 (283)
T ss_pred             CCcceeeccccccccccCCCcccccccCHHHhc
Confidence            999887542211    11223467799999865

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=2e-16  Score=91.29  Aligned_cols=90  Identities=26%  Similarity=0.359  Sum_probs=72.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++....  .++...+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.++++|||++........ 
T Consensus        87 ~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv----~~~~~~~l~dfg~~~~~~~~~~~  160 (263)
T cd06625          87 PGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILR----DSAGNVKLGDFGASKRLQTICSS  160 (263)
T ss_pred             CCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEeecccceeccccccc
Confidence            5788999987654  68889999999999999999999999999999999999    5566899999998865432111 


Q ss_pred             ----ceecccccccCcccccC
Q psy11820         81 ----NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ----~~~~~~~~~~~pe~~~~   97 (98)
                          ....++..|+|||.+.+
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~  181 (263)
T cd06625         161 GTGMKSVTGTPYWMSPEVISG  181 (263)
T ss_pred             cccccCCCcCccccCcceecc
Confidence                22346678999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.69  E-value=1.4e-16  Score=91.12  Aligned_cols=89  Identities=21%  Similarity=0.321  Sum_probs=71.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||.+....... 
T Consensus        67 ~~~~~L~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~~l~df~~~~~~~~~~-  139 (237)
T cd05576          67 AEGGKLWSHISKFL--NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILL----DDRGHIQLTYFSRWSEVEDSC-  139 (237)
T ss_pred             CCCCCHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE----cCCCCEEEecccchhcccccc-
Confidence            35789999987654  58999999999999999999999999999999999999    666789999999765543322 


Q ss_pred             ceecccccccCccccc
Q psy11820         81 NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~   96 (98)
                      .....+..|++||.+.
T Consensus       140 ~~~~~~~~y~aPE~~~  155 (237)
T cd05576         140 DGEAVENMYCAPEVGG  155 (237)
T ss_pred             ccCCcCccccCCcccC
Confidence            2233456799999864

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.69  E-value=2e-16  Score=91.53  Aligned_cols=89  Identities=28%  Similarity=0.431  Sum_probs=73.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||++......  .
T Consensus        89 ~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill----~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd06646          89 GGGSLQDIYHVTG--PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILL----TDNGDVKLADFGVAAKITATIAK  162 (267)
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE----CCCCCEEECcCccceeecccccc
Confidence            5689999887544  68899999999999999999999999999999999999    66678999999988765322  1


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....+++.|+|||.+.
T Consensus       163 ~~~~~~~~~y~~PE~~~  179 (267)
T cd06646         163 RKSFIGTPYWMAPEVAA  179 (267)
T ss_pred             cCccccCccccCHhHcc
Confidence            22345678899999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.69  E-value=1.5e-16  Score=99.47  Aligned_cols=91  Identities=32%  Similarity=0.468  Sum_probs=69.2

Q ss_pred             chhHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-
Q psy11820          3 EQNLYDFLKQNKF---SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-   78 (98)
Q Consensus         3 ~~~L~~~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-   78 (98)
                      +++|.+++.....   .......+..++.|++.||.|||+++++|+||++.||++    ...+.++|+|||++..+... 
T Consensus       246 ~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl----~~~~~vkL~DFGla~~~~~~~  321 (501)
T PHA03210        246 DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL----NCDGKIVLGDFGTAMPFEKER  321 (501)
T ss_pred             ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCCEEEEeCCCceecCccc
Confidence            3566776653321   122355677899999999999999999999999999999    66678999999999765432 


Q ss_pred             --ccceecccccccCcccccC
Q psy11820         79 --VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~~   97 (98)
                        ......+++.|+|||++.+
T Consensus       322 ~~~~~~~~gt~~y~aPE~~~~  342 (501)
T PHA03210        322 EAFDYGWVGTVATNSPEILAG  342 (501)
T ss_pred             ccccccccCCcCCCCchhhcC
Confidence              1123568899999999764

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.69  E-value=2.5e-16  Score=91.00  Aligned_cols=91  Identities=25%  Similarity=0.350  Sum_probs=72.6

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++.......+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||.+........ 
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill----~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05069          83 GKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILV----GDNLVCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE----cCCCeEEECCCccceEccCCccc
Confidence            56799999976554457888999999999999999999999999999999999    6677899999998875432211 


Q ss_pred             --ceecccccccCccccc
Q psy11820         81 --NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 --~~~~~~~~~~~pe~~~   96 (98)
                        ....++..|++||...
T Consensus       159 ~~~~~~~~~~y~~Pe~~~  176 (260)
T cd05069         159 ARQGAKFPIKWTAPEAAL  176 (260)
T ss_pred             ccCCCccchhhCCHHHhc
Confidence              1223455799999764

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.69  E-value=2.1e-16  Score=95.77  Aligned_cols=77  Identities=26%  Similarity=0.289  Sum_probs=61.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc----ceecccccccCc
Q psy11820         17 PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC----NTYLQSRYYRAP   92 (98)
Q Consensus        17 ~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~----~~~~~~~~~~~p   92 (98)
                      .++++.+..++.+++.|+.|+|+.+++|+|+++.|+++    +....++++|||++........    ....++..|+||
T Consensus       210 ~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill----~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  285 (375)
T cd05104         210 ALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILL----THGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAP  285 (375)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEE----ECCCcEEEecCccceeccCcccccccCCCCCCcceeCh
Confidence            46778889999999999999999999999999999999    5556799999999876532211    122234569999


Q ss_pred             ccccC
Q psy11820         93 EIILG   97 (98)
Q Consensus        93 e~~~~   97 (98)
                      |++.+
T Consensus       286 E~~~~  290 (375)
T cd05104         286 ESIFN  290 (375)
T ss_pred             hHhcC
Confidence            98754

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.69  E-value=2.4e-16  Score=92.40  Aligned_cols=93  Identities=24%  Similarity=0.312  Sum_probs=72.8

Q ss_pred             CcchhHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEE
Q psy11820          1 MLEQNLYDFLKQNKF--------------SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKV   66 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~--------------~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l   66 (98)
                      +.+++|.+++.....              ..+++..+..++.+++.|+.|+|+++++|+|+++.|+++    +....+++
T Consensus        89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~----~~~~~~~l  164 (291)
T cd05094          89 MKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV----GANLLVKI  164 (291)
T ss_pred             CCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE----ccCCcEEE
Confidence            357899999875431              247888999999999999999999999999999999999    66678999


Q ss_pred             eeecCceeecccc----cceecccccccCcccccC
Q psy11820         67 IDFGSASHVSKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        67 ~~~g~~~~~~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      .|||.+.......    .....++..|+|||.+.+
T Consensus       165 ~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  199 (291)
T cd05094         165 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY  199 (291)
T ss_pred             CCCCcccccCCCceeecCCCCCcceeecChHHhcc
Confidence            9999886543211    122334677999998753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.69  E-value=2.8e-16  Score=90.72  Aligned_cols=91  Identities=26%  Similarity=0.371  Sum_probs=72.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++.......+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+........ 
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili----~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05070          83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILV----GDGLVCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEE----eCCceEEeCCceeeeeccCcccc
Confidence            47899999976554568899999999999999999999999999999999999    5566899999998876533211 


Q ss_pred             --ceecccccccCccccc
Q psy11820         81 --NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 --~~~~~~~~~~~pe~~~   96 (98)
                        ....++..|+|||.+.
T Consensus       159 ~~~~~~~~~~y~aPE~~~  176 (260)
T cd05070         159 ARQGAKFPIKWTAPEAAL  176 (260)
T ss_pred             cccCCCCCccccChHHHh
Confidence              1223345799999764

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.69  E-value=2.2e-16  Score=90.72  Aligned_cols=92  Identities=24%  Similarity=0.300  Sum_probs=74.6

Q ss_pred             cchhHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820          2 LEQNLYDFLKQNK-------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus         2 ~~~~L~~~~~~~~-------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .+++|.+++....       ...+++..+..++.+++.|+.|+|+++++|+|+++.|+++    ...+.+++.|||.+..
T Consensus        79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili----~~~~~~~l~dfg~~~~  154 (262)
T cd00192          79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLV----GEDLVVKISDFGLSRD  154 (262)
T ss_pred             cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEE----CCCCcEEEcccccccc
Confidence            4789999997651       2468999999999999999999999999999999999999    6667899999998876


Q ss_pred             ecccc----cceecccccccCcccccC
Q psy11820         75 VSKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        75 ~~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      .....    .....++..|+|||.+.+
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~  181 (262)
T cd00192         155 VYDDDYYRKKTGGKLPIRWMAPESLKD  181 (262)
T ss_pred             cccccccccccCCCcCccccCHHHhcc
Confidence            54321    223345678999998653

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.69  E-value=2.1e-16  Score=93.32  Aligned_cols=90  Identities=24%  Similarity=0.513  Sum_probs=71.7

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      .++|.+++.... ..++...+..++.|++.|+.|+|+++++|+|+++.|+++    +..+.++++|||++......  ..
T Consensus        87 ~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~~~~~  161 (309)
T cd07872          87 DKDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLI----NERGELKLADFGLARAKSVPTKTY  161 (309)
T ss_pred             CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCCEEECccccceecCCCcccc
Confidence            457888876543 247888999999999999999999999999999999999    66678999999988754321  12


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       162 ~~~~~~~~y~aPE~~~~  178 (309)
T cd07872         162 SNEVVTLWYRPPDVLLG  178 (309)
T ss_pred             ccccccccccCCHHHhC
Confidence            23456788999998753

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0196|consensus

Probab=99.69  E-value=3.8e-17  Score=104.30  Aligned_cols=91  Identities=25%  Similarity=0.353  Sum_probs=76.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      |.||+|+.||+.+.+ .|+...+..+++.|+.|+.||-+.+++|||+..+||++    +.+..+|++|||+++.+.... 
T Consensus       712 MENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV----NsnLvCKVsDFGLSRvledd~~  786 (996)
T KOG0196|consen  712 MENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV----NSNLVCKVSDFGLSRVLEDDPE  786 (996)
T ss_pred             hhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee----ccceEEEeccccceeecccCCC
Confidence            789999999998874 48888999999999999999999999999999999999    888899999999999775432 


Q ss_pred             --cceecc--cccccCccccc
Q psy11820         80 --CNTYLQ--SRYYRAPEIIL   96 (98)
Q Consensus        80 --~~~~~~--~~~~~~pe~~~   96 (98)
                        ..+..|  +.+|.|||.+.
T Consensus       787 ~~ytt~GGKIPiRWTAPEAIa  807 (996)
T KOG0196|consen  787 AAYTTLGGKIPIRWTAPEAIA  807 (996)
T ss_pred             ccccccCCccceeecChhHhh
Confidence              122222  24799999874

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.69  E-value=1.6e-16  Score=103.69  Aligned_cols=95  Identities=13%  Similarity=0.161  Sum_probs=69.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCC---------------CCCccEEE
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV---------------RQPYRVKV   66 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~---------------~~~~~~~l   66 (98)
                      .+++|.+++... ...++...+..++.|++.||.|||+++|+||||+|.||++....               +....+++
T Consensus        62 ~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki  140 (793)
T PLN00181         62 EDVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKS  140 (793)
T ss_pred             CCccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccc
Confidence            367899999743 23589999999999999999999999999999999999994211               12345677


Q ss_pred             eeecCceeeccc------------------ccceecccccccCcccccC
Q psy11820         67 IDFGSASHVSKA------------------VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        67 ~~~g~~~~~~~~------------------~~~~~~~~~~~~~pe~~~~   97 (98)
                      .|||+++.....                  ......++++|+|||++.+
T Consensus       141 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~  189 (793)
T PLN00181        141 REIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNG  189 (793)
T ss_pred             cccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhcc
Confidence            788776532100                  0011347888999999764

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.69  E-value=2.7e-16  Score=92.09  Aligned_cols=90  Identities=26%  Similarity=0.392  Sum_probs=73.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||++......  
T Consensus        87 ~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~----~~~~~~kl~dfg~~~~~~~~~~  160 (290)
T cd05613          87 INGGELFTHLSQRE--RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL----DSNGHVVLTDFGLSKEFHEDEV  160 (290)
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE----CCCCCEEEeeCccceecccccc
Confidence            35789999997654  68889999999999999999999999999999999999    56678999999988764322  


Q ss_pred             -ccceecccccccCccccc
Q psy11820         79 -VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~   96 (98)
                       ......++..|++||.+.
T Consensus       161 ~~~~~~~~~~~y~aPE~~~  179 (290)
T cd05613         161 ERAYSFCGTIEYMAPDIVR  179 (290)
T ss_pred             cccccccCCcccCChhhcc
Confidence             112345678899999875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.68  E-value=1.9e-16  Score=91.67  Aligned_cols=90  Identities=26%  Similarity=0.346  Sum_probs=72.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++....  .+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.++++|||.+......   
T Consensus        89 ~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~----~~~~~~~l~Dfg~~~~~~~~~~~  162 (265)
T cd06652          89 PGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILR----DSVGNVKLGDFGASKRLQTICLS  162 (265)
T ss_pred             CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEe----cCCCCEEECcCcccccccccccc
Confidence            4789999987654  58888899999999999999999999999999999999    56678999999988654211   


Q ss_pred             --ccceecccccccCcccccC
Q psy11820         79 --VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~~   97 (98)
                        ......++..|+|||.+.+
T Consensus       163 ~~~~~~~~~~~~y~aPE~~~~  183 (265)
T cd06652         163 GTGMKSVTGTPYWMSPEVISG  183 (265)
T ss_pred             ccccccCCCCccccChhhhcC
Confidence              1122346778999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.68  E-value=2.9e-16  Score=94.00  Aligned_cols=77  Identities=31%  Similarity=0.351  Sum_probs=61.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc----cceecccccccCc
Q psy11820         17 PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV----CNTYLQSRYYRAP   92 (98)
Q Consensus        17 ~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~----~~~~~~~~~~~~p   92 (98)
                      .+++..+..++.|++.|+.|+|+++++|+|+++.|+++    +....++|+|||++.......    .....++..|+||
T Consensus       169 ~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill----~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  244 (337)
T cd05054         169 PLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILL----SENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  244 (337)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE----eCCCcEEEeccccchhcccCcchhhccCCCCCccccCc
Confidence            57888899999999999999999999999999999999    555679999999987643211    1122345679999


Q ss_pred             ccccC
Q psy11820         93 EIILG   97 (98)
Q Consensus        93 e~~~~   97 (98)
                      |++.+
T Consensus       245 E~~~~  249 (337)
T cd05054         245 ESIFD  249 (337)
T ss_pred             HHhcC
Confidence            97653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.68  E-value=1.5e-16  Score=92.19  Aligned_cols=92  Identities=24%  Similarity=0.275  Sum_probs=69.8

Q ss_pred             CcchhHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc
Q psy11820          1 MLEQNLYDFLKQNKF---SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK   77 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~   77 (98)
                      +.+++|.+++.....   ...++..+..++.|++.|++|+|+++++|+|+++.|+++    +..+.++++|||++.....
T Consensus        77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill----~~~~~~kl~dfg~~~~~~~  152 (269)
T cd05042          77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQL----TADLSVKIGDYGLALEQYP  152 (269)
T ss_pred             CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEe----cCCCcEEEecccccccccc
Confidence            357899999976532   234577788999999999999999999999999999999    6667899999998764321


Q ss_pred             c----ccceecccccccCccccc
Q psy11820         78 A----VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        78 ~----~~~~~~~~~~~~~pe~~~   96 (98)
                      .    ......++..|+|||++.
T Consensus       153 ~~~~~~~~~~~~~~~y~aPE~~~  175 (269)
T cd05042         153 EDYYITKDCHAVPLRWLAPELVE  175 (269)
T ss_pred             chheeccCCCCCcccccCHHHHh
Confidence            1    112223456799999863

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.68  E-value=3.6e-16  Score=90.02  Aligned_cols=90  Identities=26%  Similarity=0.294  Sum_probs=72.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++.......+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+....... .
T Consensus        81 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili----~~~~~~kl~Dfg~~~~~~~~~-~  155 (254)
T cd05083          81 SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILV----SEDGVAKVSDFGLARVGSMGV-D  155 (254)
T ss_pred             CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE----cCCCcEEECCCccceeccccC-C
Confidence            57899999976554468889999999999999999999999999999999999    666789999999886543211 1


Q ss_pred             eecccccccCccccc
Q psy11820         82 TYLQSRYYRAPEIIL   96 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~   96 (98)
                      ....+..|+|||.+.
T Consensus       156 ~~~~~~~y~~pe~~~  170 (254)
T cd05083         156 NSKLPVKWTAPEALK  170 (254)
T ss_pred             CCCCCceecCHHHhc
Confidence            222345699999765

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0607|consensus

Probab=99.68  E-value=1.6e-16  Score=93.42  Aligned_cols=92  Identities=28%  Similarity=0.394  Sum_probs=75.2

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec----
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS----   76 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~----   76 (98)
                      |.||.|..++...+  .+++.++..+.++|+.|+.|||.+||.|||++|+||+-..+ +...-+||.||.++...-    
T Consensus       158 m~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~p-n~vsPvKiCDfDLgSg~k~~~~  234 (463)
T KOG0607|consen  158 MRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESP-NKVSPVKICDFDLGSGIKLNND  234 (463)
T ss_pred             ccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCC-CCcCceeeeccccccccccCCC
Confidence            67899999998776  79999999999999999999999999999999999998655 344568999998875431    


Q ss_pred             -----ccccceecccccccCcccc
Q psy11820         77 -----KAVCNTYLQSRYYRAPEII   95 (98)
Q Consensus        77 -----~~~~~~~~~~~~~~~pe~~   95 (98)
                           .....+.+|+..|||||+.
T Consensus       235 ~spastP~L~tPvGSAEfMAPEVV  258 (463)
T KOG0607|consen  235 CSPASTPELLTPVGSAEFMAPEVV  258 (463)
T ss_pred             CCCCCCccccCcccchhhcchhHH
Confidence                 1123455788889999974

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.68  E-value=3.3e-16  Score=90.11  Aligned_cols=93  Identities=26%  Similarity=0.408  Sum_probs=75.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++.......++...+..++.+++.++.|+|+.+++|+|+++.|+++    .....++++|||.+......  
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~----~~~~~~kl~d~~~~~~~~~~~~  156 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFL----TKAGLIKLGDFGISKILGSEYS  156 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEE----eCCCCEEECcCcceEEcccccc
Confidence            357899999987644468899999999999999999999999999999999999    55668999999988765332  


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||.+.+
T Consensus       157 ~~~~~~~~~~y~ape~~~~  175 (256)
T cd08221         157 MAETVVGTPYYMSPELCQG  175 (256)
T ss_pred             cccccCCCccccCHhhcCC
Confidence            1233457788999998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.68  E-value=3.2e-16  Score=92.45  Aligned_cols=92  Identities=27%  Similarity=0.326  Sum_probs=73.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++.......+++..+..++.+++.|+.|+|+++++|+|+++.|+++    .....++++|||.+.......  
T Consensus       122 ~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~~l~dfg~~~~~~~~~~~  197 (302)
T cd05055         122 CYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLL----THGKIVKICDFGLARDIMNDSNY  197 (302)
T ss_pred             CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEE----cCCCeEEECCCcccccccCCCce
Confidence            57899999976544458999999999999999999999999999999999999    566689999999887543221  


Q ss_pred             --cceecccccccCcccccC
Q psy11820         80 --CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 --~~~~~~~~~~~~pe~~~~   97 (98)
                        .....++..|+|||.+.+
T Consensus       198 ~~~~~~~~~~~y~aPE~~~~  217 (302)
T cd05055         198 VVKGNARLPVKWMAPESIFN  217 (302)
T ss_pred             eecCCCCcccccCCHhhhcc
Confidence              112234567999998653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.68  E-value=2.5e-16  Score=91.81  Aligned_cols=91  Identities=30%  Similarity=0.519  Sum_probs=74.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--AV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~   79 (98)
                      .+++|.+++.......+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||++.....  ..
T Consensus       102 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili----~~~~~~~l~dfg~~~~~~~~~~~  177 (282)
T cd06636         102 GAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL----TENAEVKLVDFGVSAQLDRTVGR  177 (282)
T ss_pred             CCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEeeCcchhhhhccccC
Confidence            46789999877655568888899999999999999999999999999999999    5666899999998765432  12


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....+++.|+|||.+.
T Consensus       178 ~~~~~~~~~y~aPE~l~  194 (282)
T cd06636         178 RNTFIGTPYWMAPEVIA  194 (282)
T ss_pred             CCcccccccccCHhhcC
Confidence            23445778899999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.68  E-value=3e-16  Score=91.48  Aligned_cols=89  Identities=28%  Similarity=0.573  Sum_probs=73.3

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc---
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV---   79 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~---   79 (98)
                      +++|.+++.... ..+++..+..++.+++.++.|+|+.+++|+|+++.|+++    +..+.+++.|||.+.......   
T Consensus        82 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~----~~~~~~~l~dfg~~~~~~~~~~~~  156 (286)
T cd07832          82 PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLI----SADGVLKIADFGLARLFSEEEPRL  156 (286)
T ss_pred             CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEE----cCCCcEEEeeeeecccccCCCCCc
Confidence            789999887543 368999999999999999999999999999999999999    556789999999887653321   


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....++..|+|||.+.
T Consensus       157 ~~~~~~~~~y~aPE~~~  173 (286)
T cd07832         157 YSHQVATRWYRAPELLY  173 (286)
T ss_pred             cccccCcccccCceeee
Confidence            23345778899999875

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.68  E-value=3.6e-16  Score=91.56  Aligned_cols=93  Identities=23%  Similarity=0.309  Sum_probs=72.1

Q ss_pred             CcchhHHHHHhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeee
Q psy11820          1 MLEQNLYDFLKQNK-----------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF   69 (98)
Q Consensus         1 ~~~~~L~~~~~~~~-----------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~   69 (98)
                      +.+++|.+++....           ...+++..+..++.|++.|+.|+|+++++|+|++|.|+++    +..+.+++.||
T Consensus        89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili----~~~~~~kl~df  164 (288)
T cd05093          89 MKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV----GENLLVKIGDF  164 (288)
T ss_pred             CCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE----ccCCcEEeccC
Confidence            35789999886432           1248899999999999999999999999999999999999    66678999999


Q ss_pred             cCceeecccc----cceecccccccCcccccC
Q psy11820         70 GSASHVSKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        70 g~~~~~~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      |++.......    .....++..|+|||++.+
T Consensus       165 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  196 (288)
T cd05093         165 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY  196 (288)
T ss_pred             CccccccCCceeecCCCCCccccccCHHHhcc
Confidence            9887542211    112233567999998753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.68  E-value=2.6e-16  Score=93.85  Aligned_cols=90  Identities=31%  Similarity=0.609  Sum_probs=72.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|+|||.+......   
T Consensus        88 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili----~~~~~~kl~Dfg~a~~~~~~~~~  161 (332)
T cd07857          88 MEADLHQIIRSGQ--PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLV----NADCELKICDFGLARGFSENPGE  161 (332)
T ss_pred             ccCCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEE----cCCCCEEeCcCCCceeccccccc
Confidence            3568888886544  68999999999999999999999999999999999999    66678999999988754321   


Q ss_pred             ---ccceecccccccCcccccC
Q psy11820         79 ---VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ---~~~~~~~~~~~~~pe~~~~   97 (98)
                         ......+++.|+|||.+.+
T Consensus       162 ~~~~~~~~~g~~~y~aPE~~~~  183 (332)
T cd07857         162 NAGFMTEYVATRWYRAPEIMLS  183 (332)
T ss_pred             ccccccCcccCccccCcHHHhC
Confidence               1123457788999997643

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0574|consensus

Probab=99.68  E-value=3.1e-17  Score=96.03  Aligned_cols=89  Identities=30%  Similarity=0.478  Sum_probs=77.1

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      .|+..++++.. ..++++.++..+++..+.|++|||...-+|||++..||++    ...+..+++|||.+..+...  ..
T Consensus       112 AGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL----NT~G~AKLADFGVAGQLTDTMAKR  186 (502)
T KOG0574|consen  112 AGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL----NTDGIAKLADFGVAGQLTDTMAKR  186 (502)
T ss_pred             CCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE----cccchhhhhhccccchhhhhHHhh
Confidence            47788888754 3479999999999999999999999999999999999999    77789999999998877643  44


Q ss_pred             ceecccccccCccccc
Q psy11820         81 NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~   96 (98)
                      .+..|||+|||||++.
T Consensus       187 NTVIGTPFWMAPEVI~  202 (502)
T KOG0574|consen  187 NTVIGTPFWMAPEVIE  202 (502)
T ss_pred             CccccCcccccHHHHH
Confidence            6788999999999975

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=3.4e-16  Score=90.29  Aligned_cols=88  Identities=30%  Similarity=0.500  Sum_probs=73.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++....  .++...+..++.|++.|+.|+|+.+++|+|+++.|+++    .....+++.|||++.....  ..
T Consensus        80 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~~--~~  151 (260)
T cd05611          80 NGGDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI----DQTGHLKLTDFGLSRNGLE--NK  151 (260)
T ss_pred             CCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----CCCCcEEEeecccceeccc--cc
Confidence            5789999997654  68899999999999999999999999999999999999    5667899999998765432  12


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...++..|++||.+.+
T Consensus       152 ~~~~~~~y~~pe~~~~  167 (260)
T cd05611         152 KFVGTPDYLAPETILG  167 (260)
T ss_pred             cCCCCcCccChhhhcC
Confidence            3346678999998754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.68  E-value=3.8e-16  Score=90.09  Aligned_cols=89  Identities=26%  Similarity=0.326  Sum_probs=71.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    .....++++|||.+........ 
T Consensus        78 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill----~~~~~~kl~Dfg~~~~~~~~~~~  151 (257)
T cd05116          78 ELGPLNKFLQKNK--HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLL----VTQHYAKISDFGLSKALGADENY  151 (257)
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEE----cCCCeEEECCCccccccCCCCCe
Confidence            4678999997654  68899999999999999999999999999999999999    5566899999998876533211 


Q ss_pred             ----ceecccccccCccccc
Q psy11820         81 ----NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ----~~~~~~~~~~~pe~~~   96 (98)
                          ....++..|+|||.+.
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~  171 (257)
T cd05116         152 YKAKTHGKWPVKWYAPECMN  171 (257)
T ss_pred             eeecCCCCCCccccCHhHhc
Confidence                1112246799999764

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.68  E-value=3.6e-16  Score=92.59  Aligned_cols=93  Identities=25%  Similarity=0.316  Sum_probs=71.2

Q ss_pred             CcchhHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEE
Q psy11820          1 MLEQNLYDFLKQNK--------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKV   66 (98)
Q Consensus         1 ~~~~~L~~~~~~~~--------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l   66 (98)
                      +.+++|.+++....              ...+++..+..++.|++.|+.|+|+++++|+|+++.|+++    ...+.+++
T Consensus       100 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill----~~~~~~kL  175 (314)
T cd05099         100 AAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV----TEDNVMKI  175 (314)
T ss_pred             CCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE----cCCCcEEE
Confidence            35789999987532              1247888899999999999999999999999999999999    55668999


Q ss_pred             eeecCceeecccc----cceecccccccCcccccC
Q psy11820         67 IDFGSASHVSKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        67 ~~~g~~~~~~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      .|||.+.......    .....++..|+|||++.+
T Consensus       176 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  210 (314)
T cd05099         176 ADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD  210 (314)
T ss_pred             ccccccccccccccccccccCCCCccccCHHHHcc
Confidence            9999987543211    111123356999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.68  E-value=5e-16  Score=89.44  Aligned_cols=90  Identities=22%  Similarity=0.294  Sum_probs=72.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++.......+++..+..++.|++.|+.|+|+++++|+|+++.|+++    +..+.+++.|||.+........ 
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili----~~~~~~~l~d~g~~~~~~~~~~-  157 (256)
T cd05039          83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLV----SEDLVAKVSDFGLAKEASQGQD-  157 (256)
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEE----eCCCCEEEcccccccccccccc-
Confidence            46899999986654468999999999999999999999999999999999999    6667899999998876533221 


Q ss_pred             eecccccccCccccc
Q psy11820         82 TYLQSRYYRAPEIIL   96 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~   96 (98)
                      ....+..|+|||.+.
T Consensus       158 ~~~~~~~~~ape~~~  172 (256)
T cd05039         158 SGKLPVKWTAPEALR  172 (256)
T ss_pred             cCCCcccccCchhhc
Confidence            222345699999764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG0608|consensus

Probab=99.68  E-value=2.2e-16  Score=99.65  Aligned_cols=69  Identities=22%  Similarity=0.429  Sum_probs=62.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      +.||++-.+|=+.+  .|.+..+++|+.++.+|+.+.|+.|+|||||++.||+|    +..+.+||.|||++..+
T Consensus       711 IPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILI----DrdGHIKLTDFGLCTGf  779 (1034)
T KOG0608|consen  711 IPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI----DRDGHIKLTDFGLCTGF  779 (1034)
T ss_pred             cCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEE----ccCCceeeeeccccccc
Confidence            36888888887665  78999999999999999999999999999999999999    88889999999987654

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.68  E-value=3e-16  Score=91.39  Aligned_cols=92  Identities=24%  Similarity=0.278  Sum_probs=74.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+++|.+++.......+++..+..++.|++.|+.|+|+.+++|+|+++.||++    ...+.+++.|||.+...... ..
T Consensus        76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~----~~~~~~~l~dfg~~~~~~~~~~~  151 (277)
T cd05577          76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL----DDHGNVRISDLGLAVELKGGKKI  151 (277)
T ss_pred             CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE----CCCCCEEEccCcchhhhccCCcc
Confidence            46899999876554468999999999999999999999999999999999999    66678999999987654322 12


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....++..|++||++.+
T Consensus       152 ~~~~~~~~y~~PE~~~~  168 (277)
T cd05577         152 KGRAGTPGYMAPEVLQG  168 (277)
T ss_pred             ccccCCCCcCCHHHhcC
Confidence            23346678999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0669|consensus

Probab=99.67  E-value=1.5e-16  Score=91.08  Aligned_cols=90  Identities=24%  Similarity=0.506  Sum_probs=73.0

Q ss_pred             hhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-----
Q psy11820          4 QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-----   78 (98)
Q Consensus         4 ~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-----   78 (98)
                      -+|.-++.+.. ..++..++..++.++..|+.|+|++.++|||+++.|++|    +..+.++++|||+++.++.+     
T Consensus       108 hDLaGlLsn~~-vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI----t~dgilklADFGlar~fs~~~n~~k  182 (376)
T KOG0669|consen  108 HDLAGLLSNRK-VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI----TKDGILKLADFGLARAFSTSKNVVK  182 (376)
T ss_pred             hhHHHHhcCcc-ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE----cCCceEEeeccccccceecccccCC
Confidence            35555565432 358899999999999999999999999999999999999    67778999999999766432     


Q ss_pred             -ccceecccccccCcccccCC
Q psy11820         79 -VCNTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~~   98 (98)
                       .......|.||.+||.+.|.
T Consensus       183 prytnrvvTLwYrppEllLG~  203 (376)
T KOG0669|consen  183 PRYTNRVVTLWYRPPELLLGD  203 (376)
T ss_pred             CCcccceeeeecCCHHHhhcc
Confidence             23345668999999998874

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.67  E-value=4.2e-16  Score=89.72  Aligned_cols=91  Identities=22%  Similarity=0.269  Sum_probs=72.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++.......+++..+..++.|++.|++|+|+.+++|+|+++.|+++    ...+.++++|||.+.......  
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~----~~~~~~kl~dfg~~~~~~~~~~~  153 (257)
T cd05040          78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILL----ASDDKVKIGDFGLMRALPQNEDH  153 (257)
T ss_pred             CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEE----ecCCEEEeccccccccccccccc
Confidence            47899999976543468899999999999999999999999999999999999    556789999999887653211  


Q ss_pred             ---cceecccccccCccccc
Q psy11820         80 ---CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ---~~~~~~~~~~~~pe~~~   96 (98)
                         .....++..|++||.+.
T Consensus       154 ~~~~~~~~~~~~y~~pE~~~  173 (257)
T cd05040         154 YVMEEHLKVPFAWCAPESLR  173 (257)
T ss_pred             eecccCCCCCceecCHHHhc
Confidence               11223456799999764

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.67  E-value=3.4e-16  Score=90.30  Aligned_cols=91  Identities=26%  Similarity=0.338  Sum_probs=72.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++.......++...+..++.+++.|+.|+|+++++|+|+++.|+++    ...+.+++.|||.+........ 
T Consensus        85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv----~~~~~~kl~d~g~~~~~~~~~~~  160 (261)
T cd05148          85 EKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILV----GEDLVCKVADFGLARLIKEDVYL  160 (261)
T ss_pred             ccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEE----cCCceEEEccccchhhcCCcccc
Confidence            46899999986655568999999999999999999999999999999999999    6667899999998865432211 


Q ss_pred             -ceecccccccCccccc
Q psy11820         81 -NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 -~~~~~~~~~~~pe~~~   96 (98)
                       ....++..|++||.+.
T Consensus       161 ~~~~~~~~~~~~PE~~~  177 (261)
T cd05148         161 SSDKKIPYKWTAPEAAS  177 (261)
T ss_pred             ccCCCCceEecCHHHHc
Confidence             1222345699999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.67  E-value=4.9e-16  Score=91.59  Aligned_cols=92  Identities=23%  Similarity=0.312  Sum_probs=70.8

Q ss_pred             cchhHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEe
Q psy11820          2 LEQNLYDFLKQNKF--------------SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI   67 (98)
Q Consensus         2 ~~~~L~~~~~~~~~--------------~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~   67 (98)
                      .+++|.+++.....              ..+++..+..++.|++.|+.|+|+++++|+|+++.|+++    ...+.++++
T Consensus       104 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili----~~~~~~kl~  179 (304)
T cd05101         104 SKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV----TENNVMKIA  179 (304)
T ss_pred             CCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEE----cCCCcEEEC
Confidence            46899999875421              246777888999999999999999999999999999999    566789999


Q ss_pred             eecCceeecccc----cceecccccccCcccccC
Q psy11820         68 DFGSASHVSKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        68 ~~g~~~~~~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      |||.+.......    .....++..|+|||++.+
T Consensus       180 D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  213 (304)
T cd05101         180 DFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD  213 (304)
T ss_pred             CCccceecccccccccccCCCCCceeeCchhhcc
Confidence            999987653211    111234467999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.67  E-value=3.1e-16  Score=91.44  Aligned_cols=91  Identities=27%  Similarity=0.472  Sum_probs=71.9

Q ss_pred             chhHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          3 EQNLYDFLKQNK-FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         3 ~~~L~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .++|.+++.... ...+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++++|||++......  .
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~~~~~~  157 (285)
T cd07861          82 SMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLI----DNKGVIKLADFGLARAFGIPVRV  157 (285)
T ss_pred             CCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE----cCCCcEEECcccceeecCCCccc
Confidence            467888876543 2468899999999999999999999999999999999999    66778999999988654322  1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       158 ~~~~~~~~~y~aPE~~~~  175 (285)
T cd07861         158 YTHEVVTLWYRAPEVLLG  175 (285)
T ss_pred             ccCCcccccccChHHhcC
Confidence            122345678999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.67  E-value=4.3e-16  Score=90.92  Aligned_cols=89  Identities=25%  Similarity=0.289  Sum_probs=71.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++...   .+++..+..++.+++.|+.|+|+++++|+|+++.|+++    .....+++.|||++.......  
T Consensus        91 ~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~~l~dfg~~~~~~~~~~~  163 (283)
T cd05080          91 PLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLL----DNDRLVKIGDFGLAKAVPEGHEY  163 (283)
T ss_pred             CCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEE----cCCCcEEEeecccccccCCcchh
Confidence            568899998754   48999999999999999999999999999999999999    556689999999887543211  


Q ss_pred             ---cceecccccccCcccccC
Q psy11820         80 ---CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ---~~~~~~~~~~~~pe~~~~   97 (98)
                         .....++..|++||.+.+
T Consensus       164 ~~~~~~~~~~~~~~~PE~~~~  184 (283)
T cd05080         164 YRVREDGDSPVFWYAVECLKE  184 (283)
T ss_pred             hccCCCCCCCceeeCHhHhcc
Confidence               112234556999998653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.67  E-value=5.1e-16  Score=90.12  Aligned_cols=92  Identities=20%  Similarity=0.265  Sum_probs=70.4

Q ss_pred             CcchhHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc
Q psy11820          1 MLEQNLYDFLKQNK--FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~   78 (98)
                      +.+++|.+++....  ...++...+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.++++|||++......
T Consensus        77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~----~~~~~~~l~Dfg~~~~~~~~  152 (268)
T cd05086          77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFL----TSDLTVKVGDYGIGPSRYKE  152 (268)
T ss_pred             CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEE----cCCccEEecccccccccCcc
Confidence            35789999997643  2245667788899999999999999999999999999999    66678999999987532111


Q ss_pred             ----ccceecccccccCccccc
Q psy11820         79 ----VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ----~~~~~~~~~~~~~pe~~~   96 (98)
                          ......++..|+|||++.
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~  174 (268)
T cd05086         153 DYIETEDDKCVPLRWLAPELVG  174 (268)
T ss_pred             hhhhcccCCcCcccccCchhcc
Confidence                112234567899999863

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.67  E-value=3.9e-16  Score=91.20  Aligned_cols=91  Identities=22%  Similarity=0.330  Sum_probs=72.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++.... ..+++..+..++.+++.|+.|+|+++++|+|+++.|+++    ...+.+++.|||.+.......  
T Consensus        91 ~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~----~~~~~~~l~dfg~~~~~~~~~~~  165 (284)
T cd05079          91 PSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV----ESEHQVKIGDFGLTKAIETDKEY  165 (284)
T ss_pred             CCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEE----cCCCCEEECCCccccccccCccc
Confidence            5789999987543 257889999999999999999999999999999999999    556689999999887543211  


Q ss_pred             ---cceecccccccCcccccC
Q psy11820         80 ---CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ---~~~~~~~~~~~~pe~~~~   97 (98)
                         .....++..|+|||++.+
T Consensus       166 ~~~~~~~~~~~~y~apE~~~~  186 (284)
T cd05079         166 YTVKDDLDSPVFWYAPECLIQ  186 (284)
T ss_pred             eeecCCCCCCccccCHHHhcc
Confidence               122345567999998653

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.67  E-value=4.3e-16  Score=89.95  Aligned_cols=89  Identities=34%  Similarity=0.444  Sum_probs=73.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+++|.+++....  .++...+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||.+...... ..
T Consensus        76 ~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv----~~~~~~~l~df~~~~~~~~~~~~  149 (262)
T cd05572          76 LGGELWTILRDRG--LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLL----DSNGYVKLVDFGFAKKLKSGQKT  149 (262)
T ss_pred             CCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE----cCCCCEEEeeCCcccccCccccc
Confidence            5789999997654  58889999999999999999999999999999999999    66678999999988765432 12


Q ss_pred             ceecccccccCccccc
Q psy11820         81 NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~   96 (98)
                      ....+++.|++||.+.
T Consensus       150 ~~~~~~~~~~~PE~~~  165 (262)
T cd05572         150 WTFCGTPEYVAPEIIL  165 (262)
T ss_pred             ccccCCcCccChhHhc
Confidence            2345677899999864

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.67  E-value=1.4e-16  Score=91.64  Aligned_cols=89  Identities=40%  Similarity=0.623  Sum_probs=73.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec--ccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--KAV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~~~   79 (98)
                      .+++|.+++....  .++...+..++.|++.|+.++|+.+++|+|+++.||++    ...+.+++.|||.+....  ...
T Consensus        81 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~----~~~~~~~l~Dfg~~~~~~~~~~~  154 (260)
T PF00069_consen   81 PGGSLQDYLQKNK--PLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL----DENGEVKLIDFGSSVKLSENNEN  154 (260)
T ss_dssp             TTEBHHHHHHHHS--SBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE----STTSEEEESSGTTTEESTSTTSE
T ss_pred             ccccccccccccc--cccccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccccc
Confidence            3458999998433  68999999999999999999999999999999999999    667789999999987532  222


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....+++.|+|||++.
T Consensus       155 ~~~~~~~~~y~aPE~~~  171 (260)
T PF00069_consen  155 FNPFVGTPEYMAPEVLQ  171 (260)
T ss_dssp             BSSSSSSGGGSCHHHHT
T ss_pred             ccccccccccccccccc
Confidence            33456778899999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.67  E-value=3.3e-16  Score=91.36  Aligned_cols=77  Identities=31%  Similarity=0.547  Sum_probs=65.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccceecccccccCccccc
Q psy11820         17 PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        17 ~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~pe~~~   96 (98)
                      .+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||++............++..|+|||++.
T Consensus        91 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill----~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~  166 (279)
T cd06619          91 KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLV----NTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERIS  166 (279)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEE----CCCCCEEEeeCCcceecccccccCCCCChhhcCceeec
Confidence            46788889999999999999999999999999999999    66778999999998765443334456788899999875


Q ss_pred             C
Q psy11820         97 G   97 (98)
Q Consensus        97 ~   97 (98)
                      +
T Consensus       167 ~  167 (279)
T cd06619         167 G  167 (279)
T ss_pred             C
Confidence            4

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.67  E-value=1.3e-16  Score=95.92  Aligned_cols=75  Identities=25%  Similarity=0.527  Sum_probs=62.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--ccceecccccccCcccc
Q psy11820         18 LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VCNTYLQSRYYRAPEII   95 (98)
Q Consensus        18 l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~~~pe~~   95 (98)
                      ..+..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++......  ......++..|+|||++
T Consensus       165 ~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~  240 (353)
T PLN00034        165 ADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLI----NSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERI  240 (353)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE----cCCCCEEEcccccceecccccccccccccCccccCcccc
Confidence            4567788899999999999999999999999999999    66678999999998765322  22345688899999986


Q ss_pred             c
Q psy11820         96 L   96 (98)
Q Consensus        96 ~   96 (98)
                      .
T Consensus       241 ~  241 (353)
T PLN00034        241 N  241 (353)
T ss_pred             c
Confidence            3

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.67  E-value=1.7e-16  Score=91.88  Aligned_cols=91  Identities=31%  Similarity=0.392  Sum_probs=72.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+|+|.+++.......++......++.|++.|+.|||+++++|+++++.|+++    +....+++++||+.......   
T Consensus        84 ~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill----~~~~~~Kl~~f~~~~~~~~~~~~  159 (259)
T PF07714_consen   84 PGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILL----DSNGQVKLSDFGLSRPISEKSKY  159 (259)
T ss_dssp             TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE----ETTTEEEEESTTTGEETTTSSSE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccccc
Confidence            56899999998744478999999999999999999999999999999999999    66679999999998765211   


Q ss_pred             -ccceecccccccCccccc
Q psy11820         79 -VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~   96 (98)
                       ..........|+|||.+.
T Consensus       160 ~~~~~~~~~~~~~aPE~~~  178 (259)
T PF07714_consen  160 KNDSSQQLPLRYLAPEVLK  178 (259)
T ss_dssp             EESTTSESGGGGS-HHHHH
T ss_pred             ccccccccccccccccccc
Confidence             112223456799999874

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG4278|consensus

Probab=99.67  E-value=8.7e-17  Score=101.46  Aligned_cols=92  Identities=26%  Similarity=0.368  Sum_probs=78.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      |++|+|.+|++++....++.-.++.++.||.+|+.||.++++||||+..+|+++    ..+-.++++|||+++.+....+
T Consensus       345 M~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLV----gEnhiVKvADFGLsRlMtgDTY  420 (1157)
T KOG4278|consen  345 MCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV----GENHIVKVADFGLSRLMTGDTY  420 (1157)
T ss_pred             ccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccc----cccceEEeeccchhhhhcCCce
Confidence            789999999998876678888888899999999999999999999999999999    6666899999999998766544


Q ss_pred             ceecccc---cccCccccc
Q psy11820         81 NTYLQSR---YYRAPEIIL   96 (98)
Q Consensus        81 ~~~~~~~---~~~~pe~~~   96 (98)
                      ....|..   .|.|||.+.
T Consensus       421 TAHAGAKFPIKWTAPEsLA  439 (1157)
T KOG4278|consen  421 TAHAGAKFPIKWTAPESLA  439 (1157)
T ss_pred             ecccCccCcccccCccccc
Confidence            4444443   499999864

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.67  E-value=5e-16  Score=90.66  Aligned_cols=91  Identities=22%  Similarity=0.303  Sum_probs=71.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++.... ..+++..+..++.+++.|+.|+|+++++|+|+++.|+++    ...+.++++|||++........ 
T Consensus        90 ~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili----~~~~~~~l~dfg~~~~~~~~~~~  164 (284)
T cd05081          90 PYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV----ESENRVKIGDFGLTKVLPQDKEY  164 (284)
T ss_pred             CCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE----CCCCeEEECCCcccccccCCCcc
Confidence            5789999997543 258899999999999999999999999999999999999    5666899999998875432111 


Q ss_pred             ----ceecccccccCcccccC
Q psy11820         81 ----NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ----~~~~~~~~~~~pe~~~~   97 (98)
                          ....++..|+|||.+.+
T Consensus       165 ~~~~~~~~~~~~y~aPE~~~~  185 (284)
T cd05081         165 YKVREPGESPIFWYAPESLTE  185 (284)
T ss_pred             eeecCCCCCceEeeCHHHhcc
Confidence                11122345899998754

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG1027|consensus

Probab=99.67  E-value=1.8e-16  Score=101.39  Aligned_cols=96  Identities=24%  Similarity=0.354  Sum_probs=72.3

Q ss_pred             cchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCC-CccEEEeeecCceeeccc
Q psy11820          2 LEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ-PYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         2 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~-~~~~~l~~~g~~~~~~~~   78 (98)
                      +.-+|.+++...  .........++....|+++|+++||+.+|+|||++|.||+|..++.. ..+++|+|||++..+...
T Consensus       585 C~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~  664 (903)
T KOG1027|consen  585 CACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGG  664 (903)
T ss_pred             hhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCC
Confidence            345788988763  21112224567788999999999999999999999999999775433 358899999999876422


Q ss_pred             -----ccceecccccccCcccccC
Q psy11820         79 -----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -----~~~~~~~~~~~~~pe~~~~   97 (98)
                           ......||-.|+|||++.+
T Consensus       665 ~sS~~r~s~~sGt~GW~APE~L~~  688 (903)
T KOG1027|consen  665 KSSFSRLSGGSGTSGWQAPEQLRE  688 (903)
T ss_pred             cchhhcccCCCCcccccCHHHHhc
Confidence                 2344568889999999864

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.67  E-value=2.5e-16  Score=99.59  Aligned_cols=72  Identities=35%  Similarity=0.590  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---ccceecccccccCcccc
Q psy11820         21 KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---VCNTYLQSRYYRAPEII   95 (98)
Q Consensus        21 ~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---~~~~~~~~~~~~~pe~~   95 (98)
                      ..+..++.|++.|+.|+|+.+|+|||++|.||++..   ..+.++++|||++......   ......+++.|+|||.+
T Consensus       255 ~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~---~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~  329 (566)
T PLN03225        255 KIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSE---GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQY  329 (566)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeC---CCCcEEEEeCCCccccccccccCCcccccCCCccChHHh
Confidence            346678999999999999999999999999999932   2457999999998754321   22455678899999965

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.67  E-value=3.7e-16  Score=90.42  Aligned_cols=90  Identities=23%  Similarity=0.392  Sum_probs=72.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++....  .++...+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+......   
T Consensus        89 ~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~----~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd06628          89 PGGSVAALLNNYG--AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILV----DNKGGIKISDFGISKKLEANSLS  162 (267)
T ss_pred             CCCCHHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEE----cCCCCEEecccCCCccccccccc
Confidence            4779999997654  68889999999999999999999999999999999999    66778999999987655311   


Q ss_pred             -----ccceecccccccCcccccC
Q psy11820         79 -----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -----~~~~~~~~~~~~~pe~~~~   97 (98)
                           ......++..|++||.+.+
T Consensus       163 ~~~~~~~~~~~~~~~y~~pe~~~~  186 (267)
T cd06628         163 TKTNGARPSLQGSVFWMAPEVVKQ  186 (267)
T ss_pred             CCccccccccCCCcCccChhHhcc
Confidence                 1112346778999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>PHA02988 hypothetical protein; Provisional

Probab=99.67  E-value=2.9e-16  Score=91.98  Aligned_cols=90  Identities=16%  Similarity=0.176  Sum_probs=73.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~   79 (98)
                      +.+|+|.+++....  .+++.....++.+++.|+.|+|+ .+++|+|+++.|+++    +..+.+++.|||++.......
T Consensus       104 ~~~g~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill----~~~~~~kl~dfg~~~~~~~~~  177 (283)
T PHA02988        104 CTRGYLREVLDKEK--DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLV----TENYKLKIICHGLEKILSSPP  177 (283)
T ss_pred             CCCCcHHHHHhhCC--CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEE----CCCCcEEEcccchHhhhcccc
Confidence            46789999998654  68888999999999999999998 489999999999999    667789999999887543322


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                       ....++..|+|||++.+
T Consensus       178 -~~~~~~~~y~aPE~~~~  194 (283)
T PHA02988        178 -FKNVNFMVYFSYKMLND  194 (283)
T ss_pred             -ccccCcccccCHHHhhh
Confidence             23456788999998753

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.67  E-value=6.2e-16  Score=89.26  Aligned_cols=90  Identities=23%  Similarity=0.269  Sum_probs=69.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++.... ..++...+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.++++|||++......   
T Consensus        80 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili----~~~~~~kl~dfg~~~~~~~~~~~  154 (262)
T cd05058          80 KHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCML----DESFTVKVADFGLARDIYDKEYY  154 (262)
T ss_pred             CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE----cCCCcEEECCccccccccCCcce
Confidence            5689999997543 246677788899999999999999999999999999999    56668999999988654221   


Q ss_pred             ---ccceecccccccCccccc
Q psy11820         79 ---VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ---~~~~~~~~~~~~~pe~~~   96 (98)
                         ......++..|+|||.+.
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~  175 (262)
T cd05058         155 SVHNHTGAKLPVKWMALESLQ  175 (262)
T ss_pred             eecccccCcCCccccChhHhc
Confidence               111223456799999764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.67  E-value=6.7e-16  Score=91.26  Aligned_cols=91  Identities=24%  Similarity=0.266  Sum_probs=72.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++.......+++..+..++.+++.|+.|||+.+++|+|+++.|+++    ...+.+++.+|+.+......   
T Consensus        82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili----~~~~~~kl~d~~~~~~~~~~~~~  157 (314)
T cd08216          82 AYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILL----SGDGKVVLSGLRYSVSMIKHGKR  157 (314)
T ss_pred             CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEE----ecCCceEEecCccceeecccccc
Confidence            46889999986544468899999999999999999999999999999999999    56678999999977643211   


Q ss_pred             ------ccceecccccccCccccc
Q psy11820         79 ------VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ------~~~~~~~~~~~~~pe~~~   96 (98)
                            ......++..|+|||++.
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~  181 (314)
T cd08216         158 QRVVHDFPKSSVKNLPWLSPEVLQ  181 (314)
T ss_pred             ccccccccccccccccccCHHHhc
Confidence                  112234566799999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.67  E-value=4.3e-16  Score=91.91  Aligned_cols=91  Identities=26%  Similarity=0.296  Sum_probs=69.9

Q ss_pred             cchhHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEe
Q psy11820          2 LEQNLYDFLKQNK--------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI   67 (98)
Q Consensus         2 ~~~~L~~~~~~~~--------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~   67 (98)
                      .+++|.+++....              ...++.+.+..++.|++.|++|+|+++++|+|+++.|+++    +....++++
T Consensus        91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili----~~~~~~kl~  166 (303)
T cd05088          91 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV----GENYVAKIA  166 (303)
T ss_pred             CCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEe----cCCCcEEeC
Confidence            5789999987542              1257889999999999999999999999999999999999    566689999


Q ss_pred             eecCceeeccccc-ceecccccccCccccc
Q psy11820         68 DFGSASHVSKAVC-NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        68 ~~g~~~~~~~~~~-~~~~~~~~~~~pe~~~   96 (98)
                      |||++........ .....+..|+|||.+.
T Consensus       167 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  196 (303)
T cd05088         167 DFGLSRGQEVYVKKTMGRLPVRWMAIESLN  196 (303)
T ss_pred             ccccCcccchhhhcccCCCcccccCHHHHh
Confidence            9998864321111 1112345699999764

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG1989|consensus

Probab=99.67  E-value=1.7e-16  Score=101.34  Aligned_cols=90  Identities=30%  Similarity=0.389  Sum_probs=73.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~   79 (98)
                      .||+|.|+|.......|++.+++.++.+++.||++||...  ||||||+.+|+++    ...+..||+|||-+.......
T Consensus       125 ~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLl----s~~g~~KLCDFGSatt~~~~~  200 (738)
T KOG1989|consen  125 KGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLL----SADGNYKLCDFGSATTKILSP  200 (738)
T ss_pred             cCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEE----cCCCCEEeCcccccccccCCC
Confidence            4689999999776667999999999999999999999988  9999999999999    666789999999775432110


Q ss_pred             --c---------ceecccccccCcccc
Q psy11820         80 --C---------NTYLQSRYYRAPEII   95 (98)
Q Consensus        80 --~---------~~~~~~~~~~~pe~~   95 (98)
                        .         ...-.|+-|.+||++
T Consensus       201 ~~~~e~~~ve~eI~k~TTp~YRsPEMI  227 (738)
T KOG1989|consen  201 TSAQEVNYVEEEIEKYTTPQYRSPEMI  227 (738)
T ss_pred             ccHHHHHHHHHHHHhhCCccccChHHH
Confidence              0         011346789999986

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.67  E-value=4.7e-16  Score=89.56  Aligned_cols=90  Identities=30%  Similarity=0.410  Sum_probs=72.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||++......   
T Consensus        76 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~----~~~~~~~l~dfg~~~~~~~~~~~  149 (265)
T cd05579          76 PGGDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI----DSNGHLKLTDFGLSKVGLVRRQI  149 (265)
T ss_pred             CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEE----cCCCCEEEEecccchhcccCccc
Confidence            4679999998654  68999999999999999999999999999999999999    66678999999987643221   


Q ss_pred             -------ccceecccccccCcccccC
Q psy11820         79 -------VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -------~~~~~~~~~~~~~pe~~~~   97 (98)
                             ......++..|++||...+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~Pe~~~~  175 (265)
T cd05579         150 NLNDDEKEDKRIVGTPDYIAPEVILG  175 (265)
T ss_pred             ccccccccccCcccCccccCHHHhcC
Confidence                   1122345677999997643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.67  E-value=3.2e-16  Score=92.08  Aligned_cols=89  Identities=31%  Similarity=0.469  Sum_probs=71.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++...   .+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    +....+++.|||++......  .
T Consensus       102 ~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill----~~~~~~kL~dfg~~~~~~~~~~~  174 (292)
T cd06658         102 EGGALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILL----TSDGRIKLSDFGFCAQVSKEVPK  174 (292)
T ss_pred             CCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE----cCCCCEEEccCcchhhccccccc
Confidence            567888888543   48889999999999999999999999999999999999    55668999999987654321  1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++..|+|||.+.+
T Consensus       175 ~~~~~~~~~y~aPE~~~~  192 (292)
T cd06658         175 RKSLVGTPYWMAPEVISR  192 (292)
T ss_pred             CceeecCccccCHHHHcc
Confidence            233457788999998643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.67  E-value=5.5e-16  Score=89.90  Aligned_cols=93  Identities=23%  Similarity=0.266  Sum_probs=70.8

Q ss_pred             CcchhHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec
Q psy11820          1 MLEQNLYDFLKQN----KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS   76 (98)
Q Consensus         1 ~~~~~L~~~~~~~----~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~   76 (98)
                      |.+++|.+++...    ....++++.+..++.|++.|+.|+|+++++|+|+++.|+++    .....+++.|||++....
T Consensus        88 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~  163 (272)
T cd05075          88 MKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCML----NENMNVCVADFGLSKKIY  163 (272)
T ss_pred             CCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEE----cCCCCEEECCCCcccccC
Confidence            3568898887432    12347889999999999999999999999999999999999    566789999999987653


Q ss_pred             cccc----ceecccccccCcccccC
Q psy11820         77 KAVC----NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        77 ~~~~----~~~~~~~~~~~pe~~~~   97 (98)
                      ....    .....++.|++||...+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~pe~~~~  188 (272)
T cd05075         164 NGDYYRQGRIAKMPVKWIAIESLAD  188 (272)
T ss_pred             cccceecCCcccCCcccCCHHHccC
Confidence            2211    12234567999998653

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.67  E-value=6.1e-16  Score=101.35  Aligned_cols=93  Identities=26%  Similarity=0.379  Sum_probs=71.1

Q ss_pred             CcchhHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecC
Q psy11820          1 MLEQNLYDFLKQNK---------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS   71 (98)
Q Consensus         1 ~~~~~L~~~~~~~~---------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~   71 (98)
                      +.|++|.+++....         ...++...+..++.+++.|+.|+|+.+++|+|++|.||++    +..+.+++.|||+
T Consensus        84 ~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL----d~dg~vKLiDFGL  159 (932)
T PRK13184         84 IEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL----GLFGEVVILDWGA  159 (932)
T ss_pred             CCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE----cCCCCEEEEecCc
Confidence            35789999886421         1134556678889999999999999999999999999999    6667899999999


Q ss_pred             ceeeccc--------------------ccceecccccccCcccccC
Q psy11820         72 ASHVSKA--------------------VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        72 ~~~~~~~--------------------~~~~~~~~~~~~~pe~~~~   97 (98)
                      +......                    ......|++.|+|||.+.+
T Consensus       160 Ak~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g  205 (932)
T PRK13184        160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG  205 (932)
T ss_pred             ceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC
Confidence            8754110                    0012358899999998764

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.67  E-value=6.6e-16  Score=89.23  Aligned_cols=90  Identities=23%  Similarity=0.317  Sum_probs=70.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++.... ..+++..+..++.+++.|+.|+|+++++|+|+++.|+++    .....++++|||++........ 
T Consensus        77 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~----~~~~~~kl~dfg~~~~~~~~~~~  151 (257)
T cd05115          77 SGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLL----VNQHYAKISDFGLSKALGADDSY  151 (257)
T ss_pred             CCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEE----cCCCcEEeccCCccccccCCccc
Confidence            5789999987543 368999999999999999999999999999999999999    5666899999998865432211 


Q ss_pred             ----ceecccccccCccccc
Q psy11820         81 ----NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ----~~~~~~~~~~~pe~~~   96 (98)
                          ....++..|+|||.+.
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~  171 (257)
T cd05115         152 YKARSAGKWPLKWYAPECIN  171 (257)
T ss_pred             eeccCCCCCCcccCCHHHHc
Confidence                1111245799999764

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.67  E-value=4.2e-16  Score=90.93  Aligned_cols=90  Identities=22%  Similarity=0.503  Sum_probs=72.0

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      +++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||.+......  ..
T Consensus        82 ~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~----~~~~~~~l~dfg~~~~~~~~~~~~  156 (284)
T cd07839          82 DQDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLI----NKNGELKLADFGLARAFGIPVRCY  156 (284)
T ss_pred             CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE----cCCCcEEECccchhhccCCCCCCc
Confidence            467888876543 358999999999999999999999999999999999999    66678999999988754322  11


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||.+.+
T Consensus       157 ~~~~~~~~y~aPE~~~~  173 (284)
T cd07839         157 SAEVVTLWYRPPDVLFG  173 (284)
T ss_pred             CCCccccCCcChHHHhC
Confidence            23345778999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.66  E-value=4.7e-16  Score=90.19  Aligned_cols=91  Identities=16%  Similarity=0.251  Sum_probs=71.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-C   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~   80 (98)
                      .+++|.+++.... ..+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    .....++++|||.+....... .
T Consensus        89 ~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili----~~~~~~~l~dfg~~~~~~~~~~~  163 (266)
T cd05064          89 SNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLV----NSDLVCKISGFRRLQEDKSEAIY  163 (266)
T ss_pred             CCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEE----cCCCcEEECCCcccccccccchh
Confidence            5789999997643 368899999999999999999999999999999999999    666789999999765432211 1


Q ss_pred             --ceecccccccCcccccC
Q psy11820         81 --NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 --~~~~~~~~~~~pe~~~~   97 (98)
                        ....++..|+|||.+.+
T Consensus       164 ~~~~~~~~~~y~aPE~~~~  182 (266)
T cd05064         164 TTMSGKSPVLWAAPEAIQY  182 (266)
T ss_pred             cccCCCCceeecCHHHHhh
Confidence              11223467999998653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.66  E-value=7e-16  Score=90.38  Aligned_cols=92  Identities=25%  Similarity=0.300  Sum_probs=71.1

Q ss_pred             cchhHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEe
Q psy11820          2 LEQNLYDFLKQN--------------KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI   67 (98)
Q Consensus         2 ~~~~L~~~~~~~--------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~   67 (98)
                      .+++|.+++...              ....+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.
T Consensus        99 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~----~~~~~~kL~  174 (293)
T cd05053          99 AHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV----TEDHVMKIA  174 (293)
T ss_pred             CCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE----cCCCeEEeC
Confidence            468899988642              23457888999999999999999999999999999999999    566789999


Q ss_pred             eecCceeecccc----cceecccccccCcccccC
Q psy11820         68 DFGSASHVSKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        68 ~~g~~~~~~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      |||.+.......    .....++..|+|||.+.+
T Consensus       175 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  208 (293)
T cd05053         175 DFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD  208 (293)
T ss_pred             ccccccccccccceeccCCCCCCccccCHHHhcc
Confidence            999887543211    111223456999998643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG1035|consensus

Probab=99.66  E-value=2.2e-16  Score=104.17  Aligned_cols=89  Identities=29%  Similarity=0.499  Sum_probs=69.3

Q ss_pred             hhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec-------
Q psy11820          4 QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS-------   76 (98)
Q Consensus         4 ~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-------   76 (98)
                      -+|.+++.++.+.. ....++.++++|++|+.|+|+.+++|||++|.||++    +....+||.|||++...-       
T Consensus       681 ~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFL----d~~~~VKIGDFGLAt~~~~~~~~~d  755 (1351)
T KOG1035|consen  681 TLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFL----DSRNSVKIGDFGLATDLKENLESID  755 (1351)
T ss_pred             hHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEE----cCCCCeeecccccchhhhhhhhhHh
Confidence            35566666665321 467889999999999999999999999999999999    677789999999987610       


Q ss_pred             -----c--------cccceecccccccCcccccC
Q psy11820         77 -----K--------AVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        77 -----~--------~~~~~~~~~~~~~~pe~~~~   97 (98)
                           .        .......||.-|+|||.+.+
T Consensus       756 ~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~  789 (1351)
T KOG1035|consen  756 QDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD  789 (1351)
T ss_pred             hccCccccccCCCCcccccccceeeeecHHHhcc
Confidence                 0        01123468888999998764

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.66  E-value=4e-16  Score=91.80  Aligned_cols=90  Identities=27%  Similarity=0.405  Sum_probs=72.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++...   .++...+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||.+......  
T Consensus        99 ~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill----~~~~~~kl~dfg~~~~~~~~~~  171 (296)
T cd06654          99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL----GMDGSVKLTDFGFCAQITPEQS  171 (296)
T ss_pred             cCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----cCCCCEEECccccchhcccccc
Confidence            3578999998653   47888999999999999999999999999999999999    56678999999987654321  


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||.+.+
T Consensus       172 ~~~~~~~~~~y~aPE~~~~  190 (296)
T cd06654         172 KRSTMVGTPYWMAPEVVTR  190 (296)
T ss_pred             ccCcccCCccccCHHHHcC
Confidence            1123356788999998653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.66  E-value=5.5e-16  Score=91.52  Aligned_cols=92  Identities=23%  Similarity=0.303  Sum_probs=70.6

Q ss_pred             cchhHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEe
Q psy11820          2 LEQNLYDFLKQNKF--------------SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI   67 (98)
Q Consensus         2 ~~~~L~~~~~~~~~--------------~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~   67 (98)
                      .+++|.+++.....              ..+++..+..++.|++.|+.|+|+++++|+|+++.|+++    +..+.+++.
T Consensus       107 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill----~~~~~~kL~  182 (307)
T cd05098         107 SKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV----TEDNVMKIA  182 (307)
T ss_pred             CCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEE----cCCCcEEEC
Confidence            46899999975421              247888899999999999999999999999999999999    566689999


Q ss_pred             eecCceeecccc--c--ceecccccccCcccccC
Q psy11820         68 DFGSASHVSKAV--C--NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        68 ~~g~~~~~~~~~--~--~~~~~~~~~~~pe~~~~   97 (98)
                      |||.+.......  .  .....++.|+|||++.+
T Consensus       183 dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  216 (307)
T cd05098         183 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD  216 (307)
T ss_pred             CCcccccccccchhhccccCCCccceeChHHhcc
Confidence            999886543211  0  11123457999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.66  E-value=5.9e-16  Score=89.79  Aligned_cols=92  Identities=21%  Similarity=0.286  Sum_probs=70.1

Q ss_pred             CcchhHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc
Q psy11820          1 MLEQNLYDFLKQNK---FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK   77 (98)
Q Consensus         1 ~~~~~L~~~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~   77 (98)
                      +.+++|.+++....   ....+...+..++.|++.|+.|+|+.+++|+|+++.|+++    .....+++.|||.+.....
T Consensus        77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~----~~~~~~kL~dfg~~~~~~~  152 (269)
T cd05087          77 CPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLL----TADLTVKIGDYGLSHNKYK  152 (269)
T ss_pred             CCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE----cCCCcEEECCccccccccC
Confidence            35789999987532   1235667788899999999999999999999999999999    5566899999998864322


Q ss_pred             cc----cceecccccccCccccc
Q psy11820         78 AV----CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        78 ~~----~~~~~~~~~~~~pe~~~   96 (98)
                      ..    .....++..|+|||++.
T Consensus       153 ~~~~~~~~~~~~~~~y~aPE~~~  175 (269)
T cd05087         153 EDYYVTPDQLWVPLRWIAPELVD  175 (269)
T ss_pred             cceeecCCCcCCcccccCHhHhc
Confidence            11    11234567799999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.66  E-value=9.5e-16  Score=88.57  Aligned_cols=92  Identities=27%  Similarity=0.334  Sum_probs=72.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++.......++...+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+........ 
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i----~~~~~~~l~d~~~~~~~~~~~~~  158 (260)
T cd05073          83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV----SASLVCKIADFGLARVIEDNEYT  158 (260)
T ss_pred             CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE----cCCCcEEECCCcceeeccCCCcc
Confidence            46899999976554567888899999999999999999999999999999999    6667899999998875532211 


Q ss_pred             --ceecccccccCcccccC
Q psy11820         81 --NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 --~~~~~~~~~~~pe~~~~   97 (98)
                        ....++..|++||.+.+
T Consensus       159 ~~~~~~~~~~y~~PE~~~~  177 (260)
T cd05073         159 AREGAKFPIKWTAPEAINF  177 (260)
T ss_pred             cccCCcccccccCHhHhcc
Confidence              11223456999998753

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.66  E-value=7.7e-16  Score=89.85  Aligned_cols=92  Identities=25%  Similarity=0.338  Sum_probs=71.3

Q ss_pred             cchhHHHHHhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEee
Q psy11820          2 LEQNLYDFLKQNKF-------------SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVID   68 (98)
Q Consensus         2 ~~~~L~~~~~~~~~-------------~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~   68 (98)
                      .+++|.+++.....             ..+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    .....+++.|
T Consensus        90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~----~~~~~~kL~d  165 (280)
T cd05092          90 RHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLV----GQGLVVKIGD  165 (280)
T ss_pred             CCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEE----cCCCCEEECC
Confidence            56889998875431             247888999999999999999999999999999999999    5567899999


Q ss_pred             ecCceeecccc----cceecccccccCcccccC
Q psy11820         69 FGSASHVSKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        69 ~g~~~~~~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      ||++.......    .....+++.|+|||.+.+
T Consensus       166 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  198 (280)
T cd05092         166 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY  198 (280)
T ss_pred             CCceeEcCCCceeecCCCccccccccCHHHhcc
Confidence            99886543211    112223567999997654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.66  E-value=6.3e-16  Score=91.17  Aligned_cols=91  Identities=22%  Similarity=0.313  Sum_probs=71.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+|+|.+++.... ..++++.+..++.|++.|+.|+|+++++|+|+++.|+++    .....++++|||++.......  
T Consensus        91 ~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill----~~~~~~kL~Dfg~~~~~~~~~~~  165 (303)
T cd05110          91 PHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV----KSPNHVKITDFGLARLLEGDEKE  165 (303)
T ss_pred             CCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeee----cCCCceEEccccccccccCcccc
Confidence            5788999987643 257888999999999999999999999999999999999    555679999999887643211  


Q ss_pred             --cceecccccccCcccccC
Q psy11820         80 --CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 --~~~~~~~~~~~~pe~~~~   97 (98)
                        .....++..|++||.+.+
T Consensus       166 ~~~~~~~~~~~y~~PE~~~~  185 (303)
T cd05110         166 YNADGGKMPIKWMALECIHY  185 (303)
T ss_pred             cccCCCccccccCCHHHhcc
Confidence              111223567999998653

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.66  E-value=7.4e-16  Score=89.27  Aligned_cols=92  Identities=21%  Similarity=0.188  Sum_probs=69.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCC---CCccEEEeeecCceeeccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR---QPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~---~~~~~~l~~~g~~~~~~~~   78 (98)
                      .+++|..++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.|+++.....   ....+++.|||.+......
T Consensus        87 ~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~  165 (262)
T cd05077          87 EFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR  165 (262)
T ss_pred             cCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc
Confidence            4677888876543 35889999999999999999999999999999999999954221   1123789999987654221


Q ss_pred             ccceecccccccCccccc
Q psy11820         79 VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~   96 (98)
                        ....++..|+|||.+.
T Consensus       166 --~~~~~~~~y~aPE~~~  181 (262)
T cd05077         166 --QECVERIPWIAPECVE  181 (262)
T ss_pred             --ccccccccccChhhhc
Confidence              2334667899999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.66  E-value=7.4e-16  Score=89.71  Aligned_cols=93  Identities=22%  Similarity=0.345  Sum_probs=70.2

Q ss_pred             CcchhHHHHHhhCCC--------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCc
Q psy11820          1 MLEQNLYDFLKQNKF--------SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA   72 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~--------~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~   72 (98)
                      +.+++|.+++.....        ..++...+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.++++|||++
T Consensus        91 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~----~~~~~~~l~dfg~~  166 (277)
T cd05062          91 MTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMT  166 (277)
T ss_pred             CCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEE----cCCCCEEECCCCCc
Confidence            357899999865321        135677888899999999999999999999999999999    56678999999987


Q ss_pred             eeeccccc----ceecccccccCcccccC
Q psy11820         73 SHVSKAVC----NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        73 ~~~~~~~~----~~~~~~~~~~~pe~~~~   97 (98)
                      ........    ....+++.|+|||.+.+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  195 (277)
T cd05062         167 RDIYETDYYRKGGKGLLPVRWMSPESLKD  195 (277)
T ss_pred             cccCCcceeecCCCCccCHhhcChhHhhc
Confidence            65422111    11233567999998753

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.66  E-value=1e-15  Score=89.99  Aligned_cols=92  Identities=24%  Similarity=0.255  Sum_probs=69.6

Q ss_pred             cchhHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEe
Q psy11820          2 LEQNLYDFLKQNK--------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI   67 (98)
Q Consensus         2 ~~~~L~~~~~~~~--------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~   67 (98)
                      .+++|.+++....              ...+++..+..++.|++.|+.|+|+++++|+|+++.|+++    +....+++.
T Consensus        86 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill----~~~~~~kl~  161 (297)
T cd05089          86 PYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLV----GENLASKIA  161 (297)
T ss_pred             CCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEE----CCCCeEEEC
Confidence            4689999986532              1247888999999999999999999999999999999999    566789999


Q ss_pred             eecCceeeccccc-ceecccccccCcccccC
Q psy11820         68 DFGSASHVSKAVC-NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        68 ~~g~~~~~~~~~~-~~~~~~~~~~~pe~~~~   97 (98)
                      |||++........ .....+..|++||++.+
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~  192 (297)
T cd05089         162 DFGLSRGEEVYVKKTMGRLPVRWMAIESLNY  192 (297)
T ss_pred             CcCCCccccceeccCCCCcCccccCchhhcc
Confidence            9998754321111 11122446999998653

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.66  E-value=7.5e-16  Score=88.87  Aligned_cols=92  Identities=25%  Similarity=0.295  Sum_probs=73.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++.......++...+..++.+++.|+.|+|+++++|+|+++.|+++    ...+.+++.|||.+........ 
T Consensus        84 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili----~~~~~~~l~d~g~~~~~~~~~~~  159 (261)
T cd05034          84 SKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILV----GENLVCKIADFGLARLIEDDEYT  159 (261)
T ss_pred             CCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEE----cCCCCEEECccccceeccchhhh
Confidence            57899999987654568999999999999999999999999999999999999    6667899999998876542211 


Q ss_pred             --ceecccccccCcccccC
Q psy11820         81 --NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 --~~~~~~~~~~~pe~~~~   97 (98)
                        .....+..|++||.+.+
T Consensus       160 ~~~~~~~~~~y~~PE~~~~  178 (261)
T cd05034         160 AREGAKFPIKWTAPEAANY  178 (261)
T ss_pred             hhhccCCCccccCHHHhcc
Confidence              11223456999998754

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.66  E-value=9.6e-16  Score=88.10  Aligned_cols=93  Identities=28%  Similarity=0.356  Sum_probs=74.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+++|.+++.......+++..+..++.+++.++.|+|+++++|+|+++.|+++..   ....+++.|||.+...... ..
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~---~~~~~~l~d~~~~~~~~~~~~~  158 (256)
T cd08220          82 PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK---HKMVVKIGDFGISKILSSKSKA  158 (256)
T ss_pred             CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CCCEEEEccCCCceecCCCccc
Confidence            4789999998755446889999999999999999999999999999999999932   2346799999988765432 12


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....++..|+|||.+.+
T Consensus       159 ~~~~~~~~y~aPE~~~~  175 (256)
T cd08220         159 YTVVGTPCYISPELCEG  175 (256)
T ss_pred             cccccCCcccCchhccC
Confidence            23456778999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.66  E-value=7.3e-16  Score=90.50  Aligned_cols=89  Identities=28%  Similarity=0.450  Sum_probs=72.4

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      +++|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|+++.||++    +..+.+++.|||++......  ..
T Consensus        85 ~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill----~~~~~~~l~dfg~~~~~~~~~~~~  159 (298)
T cd07841          85 ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLI----ASDGVLKLADFGLARSFGSPNRKM  159 (298)
T ss_pred             CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEE----cCCCCEEEccceeeeeccCCCccc
Confidence            678999987543 368999999999999999999999999999999999999    56678999999988765432  12


Q ss_pred             ceecccccccCccccc
Q psy11820         81 NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~   96 (98)
                      ....+++.|+|||.+.
T Consensus       160 ~~~~~~~~y~aPE~~~  175 (298)
T cd07841         160 THQVVTRWYRAPELLF  175 (298)
T ss_pred             cccccceeeeCHHHHh
Confidence            2234567799999764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.66  E-value=1.1e-15  Score=89.15  Aligned_cols=90  Identities=27%  Similarity=0.449  Sum_probs=72.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.++++|||++......  .
T Consensus        85 ~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili----~~~~~~kl~dfg~~~~~~~~~~~  159 (282)
T cd06643          85 AGGAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILF----TLDGDIKLADFGVSAKNTRTIQR  159 (282)
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE----ccCCCEEEccccccccccccccc
Confidence            4678888776532 368999999999999999999999999999999999999    56678999999987654321  1


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....+++.|+|||++.
T Consensus       160 ~~~~~~~~~y~aPE~~~  176 (282)
T cd06643         160 RDSFIGTPYWMAPEVVM  176 (282)
T ss_pred             cccccccccccCHhhcc
Confidence            23345778899999874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.66  E-value=8.3e-16  Score=90.99  Aligned_cols=69  Identities=30%  Similarity=0.399  Sum_probs=60.6

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .+++|.+++.......+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||++..
T Consensus        84 ~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~~l~dfg~~~~  152 (316)
T cd05574          84 PGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILL----HESGHIMLSDFDLSKQ  152 (316)
T ss_pred             CCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEE----cCCCCEEEeecchhhc
Confidence            47899999876544568999999999999999999999999999999999999    5667899999998754

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.66  E-value=1.2e-15  Score=87.91  Aligned_cols=91  Identities=22%  Similarity=0.269  Sum_probs=71.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++.... ..+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+.........
T Consensus        82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i----~~~~~~kl~d~g~~~~~~~~~~~  156 (256)
T cd05114          82 ENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV----SSTGVVKVSDFGMTRYVLDDEYT  156 (256)
T ss_pred             CCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEE----cCCCeEEECCCCCccccCCCcee
Confidence            5789999987543 258889999999999999999999999999999999999    56678999999988754322111


Q ss_pred             ---eecccccccCcccccC
Q psy11820         82 ---TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ---~~~~~~~~~~pe~~~~   97 (98)
                         ...++..|+|||++.+
T Consensus       157 ~~~~~~~~~~y~aPE~~~~  175 (256)
T cd05114         157 SSSGAKFPVKWSPPEVFNF  175 (256)
T ss_pred             ccCCCCCchhhCChhhccc
Confidence               1123456999998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.65  E-value=1.1e-15  Score=89.56  Aligned_cols=92  Identities=21%  Similarity=0.305  Sum_probs=71.9

Q ss_pred             cchhHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCc
Q psy11820          2 LEQNLYDFLKQNK---------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA   72 (98)
Q Consensus         2 ~~~~L~~~~~~~~---------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~   72 (98)
                      .+++|.+++....         ...+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    .....++++|||.+
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili----~~~~~~~l~dfg~~  177 (296)
T cd05051         102 ENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLV----GKNYTIKIADFGMS  177 (296)
T ss_pred             CCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceee----cCCCceEEccccce
Confidence            4688999887543         1257899999999999999999999999999999999999    66678999999988


Q ss_pred             eeecccc----cceecccccccCcccccC
Q psy11820         73 SHVSKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        73 ~~~~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      .......    .....+++.|+|||.+.+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  206 (296)
T cd05051         178 RNLYSSDYYRVQGRAPLPIRWMAWESVLL  206 (296)
T ss_pred             eecccCcceeecCcCCCCceecCHHHhhc
Confidence            7542211    122234567999998653

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.65  E-value=1.3e-15  Score=87.54  Aligned_cols=91  Identities=20%  Similarity=0.286  Sum_probs=70.3

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|+++.|+++    +..+.+++.|||.+.........
T Consensus        76 ~~~~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~----~~~~~~kl~dfg~~~~~~~~~~~  150 (252)
T cd05084          76 QGGDFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLV----TEKNVLKISDFGMSREEEDGVYA  150 (252)
T ss_pred             cCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEE----cCCCcEEECccccCccccccccc
Confidence            4789999987543 358899999999999999999999999999999999999    55668999999987654321111


Q ss_pred             e----ecccccccCcccccC
Q psy11820         82 T----YLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~----~~~~~~~~~pe~~~~   97 (98)
                      .    ...+..|+|||.+.+
T Consensus       151 ~~~~~~~~~~~y~aPE~~~~  170 (252)
T cd05084         151 STGGMKQIPVKWTAPEALNY  170 (252)
T ss_pred             ccCCCCCCceeecCchhhcC
Confidence            1    112345999998653

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.65  E-value=7.5e-16  Score=91.71  Aligned_cols=93  Identities=18%  Similarity=0.218  Sum_probs=70.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++.......+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.+|+........  
T Consensus        81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~----~~~~~~~l~~~~~~~~~~~~~~  156 (327)
T cd08227          81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI----SVDGKVYLSGLRSNLSMINHGQ  156 (327)
T ss_pred             cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEE----ecCCcEEEcccchhhccccccc
Confidence            357899999976544468899999999999999999999999999999999999    55567888888754322110  


Q ss_pred             -------ccceecccccccCcccccC
Q psy11820         79 -------VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -------~~~~~~~~~~~~~pe~~~~   97 (98)
                             ......++..|+|||++.+
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~~~~  182 (327)
T cd08227         157 RLRVVHDFPKYSVKVLPWLSPEVLQQ  182 (327)
T ss_pred             cccccccccccccceecccChHHhhc
Confidence                   0112234567999998753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.65  E-value=9.1e-16  Score=89.63  Aligned_cols=91  Identities=27%  Similarity=0.402  Sum_probs=73.5

Q ss_pred             cchhHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc
Q psy11820          2 LEQNLYDFLKQNK-FSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~   79 (98)
                      .+++|.+++.... ...+++..+..++.+++.|+.|+|+ .+++|+|+++.|+++    ...+.+++.|||.+.......
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~~~~  157 (286)
T cd06622          82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLV----NGNGQVKLCDFGVSGNLVASL  157 (286)
T ss_pred             CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEE----CCCCCEEEeecCCcccccCCc
Confidence            5778988887532 2358999999999999999999997 599999999999999    556789999999887654333


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....+++.|++||.+.
T Consensus       158 ~~~~~~~~~y~aPE~~~  174 (286)
T cd06622         158 AKTNIGCQSYMAPERIK  174 (286)
T ss_pred             cccCCCccCccCcchhc
Confidence            34445677899999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=6.6e-16  Score=89.43  Aligned_cols=91  Identities=31%  Similarity=0.486  Sum_probs=72.8

Q ss_pred             cchhHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-
Q psy11820          2 LEQNLYDFLKQNK--FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-   78 (98)
                      .+++|.+++....  ...+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||.+...... 
T Consensus        92 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~----~~~~~~~l~d~~~~~~~~~~~  167 (275)
T cd06608          92 GGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILL----TKNAEVKLVDFGVSAQLDSTL  167 (275)
T ss_pred             CCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE----ccCCeEEECCCccceecccch
Confidence            4678888876532  3468899999999999999999999999999999999999    56678999999987654321 


Q ss_pred             -ccceecccccccCccccc
Q psy11820         79 -VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~   96 (98)
                       ......++..|+|||++.
T Consensus       168 ~~~~~~~~~~~y~aPE~~~  186 (275)
T cd06608         168 GRRNTFIGTPYWMAPEVIA  186 (275)
T ss_pred             hhhcCccccccccCHhHhc
Confidence             123345677899999864

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.65  E-value=7.9e-16  Score=91.54  Aligned_cols=89  Identities=37%  Similarity=0.602  Sum_probs=73.2

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc---
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV---   79 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~---   79 (98)
                      +++|.+++....  .+++..+..++.+++.|+.++|+.+++|+|+++.|+++    ...+.++++|||.+.......   
T Consensus        87 ~~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili----~~~~~~~L~dfg~~~~~~~~~~~~  160 (330)
T cd07834          87 ETDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILV----NSNCDLKICDFGLARGVDPDEDEK  160 (330)
T ss_pred             hhhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEcccCceEeeccccccc
Confidence            457888887544  78999999999999999999999999999999999999    666789999999887654321   


Q ss_pred             --cceecccccccCcccccC
Q psy11820         80 --CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 --~~~~~~~~~~~~pe~~~~   97 (98)
                        .....+++.|+|||.+.+
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~  180 (330)
T cd07834         161 GFLTEYVVTRWYRAPELLLS  180 (330)
T ss_pred             ccccccccccCcCCceeeec
Confidence              233456788999998764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.65  E-value=5.4e-16  Score=91.31  Aligned_cols=89  Identities=34%  Similarity=0.485  Sum_probs=72.3

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++...   .+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.++++|||++......  .
T Consensus       101 ~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill----~~~~~~kL~dfg~~~~~~~~~~~  173 (297)
T cd06659         101 QGGALTDIVSQT---RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL----TLDGRVKLSDFGFCAQISKDVPK  173 (297)
T ss_pred             CCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEE----ccCCcEEEeechhHhhccccccc
Confidence            467888877653   48899999999999999999999999999999999999    66678999999987654322  1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++..|+|||++.+
T Consensus       174 ~~~~~~~~~y~aPE~~~~  191 (297)
T cd06659         174 RKSLVGTPYWMAPEVISR  191 (297)
T ss_pred             ccceecCccccCHHHHcc
Confidence            233457788999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.65  E-value=1.2e-15  Score=88.07  Aligned_cols=90  Identities=21%  Similarity=0.289  Sum_probs=71.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++..... .+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+.........
T Consensus        82 ~~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili----~~~~~~kl~d~g~~~~~~~~~~~  156 (256)
T cd05113          82 SNGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLV----DDQGCVKVSDFGLSRYVLDDEYT  156 (256)
T ss_pred             CCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE----cCCCCEEECCCccceecCCCcee
Confidence            46889999876432 58899999999999999999999999999999999999    56678999999987654322111


Q ss_pred             e---ecccccccCccccc
Q psy11820         82 T---YLQSRYYRAPEIIL   96 (98)
Q Consensus        82 ~---~~~~~~~~~pe~~~   96 (98)
                      .   ..++..|++||.+.
T Consensus       157 ~~~~~~~~~~y~~pe~~~  174 (256)
T cd05113         157 SSVGSKFPVRWSPPEVLL  174 (256)
T ss_pred             ecCCCccChhhCCHHHHh
Confidence            1   12345699999875

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.65  E-value=1.2e-15  Score=89.50  Aligned_cols=90  Identities=28%  Similarity=0.506  Sum_probs=72.9

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      +++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.+++.|||.+......  ..
T Consensus        89 ~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili----~~~~~~~l~d~g~~~~~~~~~~~~  163 (293)
T cd07843          89 EHDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL----NNRGILKICDFGLAREYGSPLKPY  163 (293)
T ss_pred             CcCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE----CCCCcEEEeecCceeeccCCcccc
Confidence            457888887643 258999999999999999999999999999999999999    66778999999988765432  22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||.+.+
T Consensus       164 ~~~~~~~~~~aPE~~~~  180 (293)
T cd07843         164 TQLVVTLWYRAPELLLG  180 (293)
T ss_pred             ccccccccccCchhhcC
Confidence            23346778999998753

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.65  E-value=1.3e-15  Score=90.98  Aligned_cols=92  Identities=24%  Similarity=0.313  Sum_probs=70.4

Q ss_pred             cchhHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEe
Q psy11820          2 LEQNLYDFLKQNK--------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI   67 (98)
Q Consensus         2 ~~~~L~~~~~~~~--------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~   67 (98)
                      .+++|.+++....              ...++...+..++.|++.|+.|+|+++++|+|+++.|+++    .....+++.
T Consensus       101 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill----~~~~~~kL~  176 (334)
T cd05100         101 SKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLV----TEDNVMKIA  176 (334)
T ss_pred             CCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE----cCCCcEEEC
Confidence            4789999987532              1236778888999999999999999999999999999999    556689999


Q ss_pred             eecCceeecccc----cceecccccccCcccccC
Q psy11820         68 DFGSASHVSKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        68 ~~g~~~~~~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      |||++.......    .....++..|+|||++.+
T Consensus       177 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  210 (334)
T cd05100         177 DFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD  210 (334)
T ss_pred             CcccceecccccccccccCCCcCceEcCHHHhcc
Confidence            999887543211    111223456999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.65  E-value=1.2e-15  Score=89.00  Aligned_cols=90  Identities=32%  Similarity=0.549  Sum_probs=71.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|..+.....  .+++..+..++.|++.++.|+|+.+++|+|+++.|+++    ...+.++++|||++.......  
T Consensus        83 ~~~~l~~~~~~~~--~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~~~~~~  156 (286)
T cd07847          83 DHTVLNELEKNPR--GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILI----TKQGQIKLCDFGFARILTGPGDD  156 (286)
T ss_pred             CccHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEE----cCCCcEEECccccceecCCCccc
Confidence            4556666665433  58999999999999999999999999999999999999    666789999999887654321  


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++..|++||.+.+
T Consensus       157 ~~~~~~~~~~~aPE~~~~  174 (286)
T cd07847         157 YTDYVATRWYRAPELLVG  174 (286)
T ss_pred             ccCcccccccCCHHHHhC
Confidence            223456778999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.65  E-value=1.2e-15  Score=93.16  Aligned_cols=91  Identities=23%  Similarity=0.288  Sum_probs=72.2

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc---
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV---   79 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~---   79 (98)
                      ++++.+++.......+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +....+++.|||++.......   
T Consensus       219 ~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill----~~~~~~kL~DfGla~~~~~~~~~~  294 (400)
T cd05105         219 DSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL----AQGKIVKICDFGLARDIMHDSNYV  294 (400)
T ss_pred             hhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE----eCCCEEEEEeCCcceecccccccc
Confidence            4567777776655679999999999999999999999999999999999999    556679999999987543211   


Q ss_pred             -cceecccccccCcccccC
Q psy11820         80 -CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 -~~~~~~~~~~~~pe~~~~   97 (98)
                       .....+++.|+|||.+.+
T Consensus       295 ~~~~~~~~~~y~aPE~~~~  313 (400)
T cd05105         295 SKGSTFLPVKWMAPESIFD  313 (400)
T ss_pred             ccCCcCCCcceEChhhhcC
Confidence             122335567999998754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.65  E-value=1.4e-15  Score=88.47  Aligned_cols=93  Identities=24%  Similarity=0.330  Sum_probs=72.2

Q ss_pred             CcchhHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEee
Q psy11820          1 MLEQNLYDFLKQNK------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVID   68 (98)
Q Consensus         1 ~~~~~L~~~~~~~~------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~   68 (98)
                      +.+++|.+++....            ...+++..+..++.+++.|+.++|+++++|+|+++.|+++    +..+.++++|
T Consensus        90 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili----~~~~~~kl~d  165 (280)
T cd05049          90 MEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLV----GYDLVVKIGD  165 (280)
T ss_pred             CCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEE----cCCCeEEECC
Confidence            35789999987542            1247788899999999999999999999999999999999    6667899999


Q ss_pred             ecCceeecccc----cceecccccccCcccccC
Q psy11820         69 FGSASHVSKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        69 ~g~~~~~~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      ||.+.......    .....+++.|+|||++.+
T Consensus       166 ~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  198 (280)
T cd05049         166 FGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY  198 (280)
T ss_pred             cccceecccCcceecCCCCcccceecChhhhcc
Confidence            99887542211    122234567999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.65  E-value=1.1e-15  Score=88.23  Aligned_cols=91  Identities=24%  Similarity=0.323  Sum_probs=72.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++.......++...+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||.+........ 
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i----~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05067          83 ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILV----SETLCCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEE----cCCCCEEEccCcceeecCCCCcc
Confidence            57899999876555568889999999999999999999999999999999999    6667899999998876542211 


Q ss_pred             --ceecccccccCccccc
Q psy11820         81 --NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 --~~~~~~~~~~~pe~~~   96 (98)
                        ....++..|++||++.
T Consensus       159 ~~~~~~~~~~y~~pe~~~  176 (260)
T cd05067         159 AREGAKFPIKWTAPEAIN  176 (260)
T ss_pred             cccCCcccccccCHHHhc
Confidence              1123345799999764

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0665|consensus

Probab=99.65  E-value=4.5e-16  Score=91.05  Aligned_cols=76  Identities=42%  Similarity=0.718  Sum_probs=66.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-ccceecccccccCccccc
Q psy11820         18 LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        18 l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~~~~~~~~~~~pe~~~   96 (98)
                      ++-+++..+..|+++|++|+|+.+|+|||++|.|+++    ...+.+|+.|||+++.-... ....+..+..|.|||++.
T Consensus       115 lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv----~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil  190 (369)
T KOG0665|consen  115 LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV----NSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVIL  190 (369)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcceeecccCccccee----cchhheeeccchhhcccCcccccCchhheeeccCchhee
Confidence            6677888999999999999999999999999999999    77889999999999875544 345567788899999987


Q ss_pred             C
Q psy11820         97 G   97 (98)
Q Consensus        97 ~   97 (98)
                      |
T Consensus       191 ~  191 (369)
T KOG0665|consen  191 G  191 (369)
T ss_pred             c
Confidence            5

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.65  E-value=1.3e-15  Score=88.70  Aligned_cols=90  Identities=24%  Similarity=0.333  Sum_probs=71.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|+++.|+++    .....+++.|||.+........ 
T Consensus        91 ~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~----~~~~~~kL~dfg~~~~~~~~~~~  165 (279)
T cd05057          91 PLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLDVDEKE  165 (279)
T ss_pred             CCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEE----cCCCeEEECCCcccccccCcccc
Confidence            5789999987653 258899999999999999999999999999999999999    5666899999998876532111 


Q ss_pred             ---ceecccccccCccccc
Q psy11820         81 ---NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ---~~~~~~~~~~~pe~~~   96 (98)
                         .....+..|++||.+.
T Consensus       166 ~~~~~~~~~~~y~~PE~~~  184 (279)
T cd05057         166 YHAEGGKVPIKWMALESIL  184 (279)
T ss_pred             eecCCCcccccccCHHHhh
Confidence               1111245699999764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.65  E-value=1.4e-15  Score=88.08  Aligned_cols=91  Identities=23%  Similarity=0.348  Sum_probs=72.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--AV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~   79 (98)
                      .+++|.+++.... +.+++..+..++.+++.|+.|+|+++++|+|+++.|+++    +....+++.|||.+.....  ..
T Consensus        88 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili----~~~~~~~l~dfg~~~~~~~~~~~  162 (266)
T cd05033          88 ENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILV----NSNLVCKVSDFGLSRRLEDSEAT  162 (266)
T ss_pred             CCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE----cCCCCEEECccchhhcccccccc
Confidence            4789999997653 368899999999999999999999999999999999999    6667899999998876531  11


Q ss_pred             cc--eecccccccCcccccC
Q psy11820         80 CN--TYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~--~~~~~~~~~~pe~~~~   97 (98)
                      ..  ....+..|++||.+.+
T Consensus       163 ~~~~~~~~~~~y~~Pe~~~~  182 (266)
T cd05033         163 YTTKGGKIPIRWTAPEAIAY  182 (266)
T ss_pred             eeccCCCCCccccChhhhcc
Confidence            11  1223457999998653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.65  E-value=9.9e-16  Score=88.74  Aligned_cols=90  Identities=26%  Similarity=0.347  Sum_probs=72.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++....  .++......++.|++.|+.|+|+.+++|+|+++.|+++    +....+++.|||++......   
T Consensus        89 ~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~----~~~~~~~l~dfg~~~~~~~~~~~  162 (266)
T cd06651          89 PGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILR----DSAGNVKLGDFGASKRLQTICMS  162 (266)
T ss_pred             CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE----CCCCCEEEccCCCcccccccccc
Confidence            4678999987654  58888999999999999999999999999999999999    56668999999988654211   


Q ss_pred             --ccceecccccccCcccccC
Q psy11820         79 --VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~~   97 (98)
                        ......++..|+|||.+.+
T Consensus       163 ~~~~~~~~~~~~y~aPE~~~~  183 (266)
T cd06651         163 GTGIRSVTGTPYWMSPEVISG  183 (266)
T ss_pred             CCccccCCccccccCHHHhCC
Confidence              1122346778999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.65  E-value=1.7e-15  Score=87.34  Aligned_cols=90  Identities=23%  Similarity=0.342  Sum_probs=71.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++....  .+++..+..++.|++.++.|+|+.+++|+|+++.|+++    +..+.+++.|||.+........ 
T Consensus        78 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili----~~~~~~kl~df~~~~~~~~~~~~  151 (257)
T cd05060          78 PLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLL----VNRHQAKISDFGMSRALGAGSDY  151 (257)
T ss_pred             CCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEE----cCCCcEEeccccccceeecCCcc
Confidence            4689999998655  68999999999999999999999999999999999999    6667899999998876532211 


Q ss_pred             -ce---ecccccccCcccccC
Q psy11820         81 -NT---YLQSRYYRAPEIILG   97 (98)
Q Consensus        81 -~~---~~~~~~~~~pe~~~~   97 (98)
                       ..   ..++..|+|||.+.+
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~~  172 (257)
T cd05060         152 YRATTAGRWPLKWYAPECINY  172 (257)
T ss_pred             cccccCccccccccCHHHhcC
Confidence             11   112346999998653

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.65  E-value=1.6e-15  Score=89.46  Aligned_cols=91  Identities=27%  Similarity=0.414  Sum_probs=71.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++....  .+++..+..++.+++.|+.|+|+++++|+|+++.||++    +..+.+++.|||.+......  
T Consensus        83 ~~g~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll----~~~~~~~l~dfg~~~~~~~~~~  156 (305)
T cd05609          83 VEGGDCATLLKNIG--ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLI----TSMGHIKLTDFGLSKIGLMSLT  156 (305)
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEE----CCCCCEEEeeCCCccccCcCcc
Confidence            35789999997654  68899999999999999999999999999999999999    66678999999987531100  


Q ss_pred             ---------------ccceecccccccCcccccC
Q psy11820         79 ---------------VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ---------------~~~~~~~~~~~~~pe~~~~   97 (98)
                                     ......++..|+|||.+.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  190 (305)
T cd05609         157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR  190 (305)
T ss_pred             ccccccccccchhhccccCCccCccccCchhccC
Confidence                           0012345677999998653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.64  E-value=9.6e-16  Score=98.57  Aligned_cols=89  Identities=21%  Similarity=0.296  Sum_probs=72.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++....  .+++..++.++.|++.||.|||+.+|+|+||++.||++    ...+.++|.|||++......  
T Consensus        86 ~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl----~~~g~vkL~DFGls~~~~~~~~  159 (669)
T cd05610          86 LIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLI----SNEGHIKLTDFGLSKVTLNREL  159 (669)
T ss_pred             CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEE----cCCCCEEEEeCCCCccccCCcc
Confidence            35789999997654  68889999999999999999999999999999999999    55678999999998765322  


Q ss_pred             ccceecccccccCcccc
Q psy11820         79 VCNTYLQSRYYRAPEII   95 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~   95 (98)
                      ......+++.|++||..
T Consensus       160 ~~~~~~~t~~~~~pe~~  176 (669)
T cd05610         160 NMMDILTTPSMAKPKND  176 (669)
T ss_pred             cccccccCccccCcccc
Confidence            22344567778888753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=1.5e-15  Score=87.57  Aligned_cols=91  Identities=27%  Similarity=0.439  Sum_probs=73.3

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||.+......  .
T Consensus        83 ~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i----~~~~~~~l~d~g~~~~~~~~~~~  157 (262)
T cd06613          83 GGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILL----TEDGDVKLADFGVSAQLTATIAK  157 (262)
T ss_pred             CCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEE----CCCCCEEECccccchhhhhhhhc
Confidence            4678999887642 368999999999999999999999999999999999999    66678999999988654322  1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++..|++||.+.+
T Consensus       158 ~~~~~~~~~y~~Pe~~~~  175 (262)
T cd06613         158 RKSFIGTPYWMAPEVAAV  175 (262)
T ss_pred             cccccCCccccCchhhcc
Confidence            233456778999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.64  E-value=1.3e-15  Score=88.16  Aligned_cols=92  Identities=24%  Similarity=0.359  Sum_probs=72.6

Q ss_pred             cchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-
Q psy11820          2 LEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-   78 (98)
Q Consensus         2 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-   78 (98)
                      .+++|.+++...  ....+++..+..++.+++.|+.|+|+++++|+|+++.|+++    +..+.+++.|||.+...... 
T Consensus        85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili----~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd08229          85 DAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI----TATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             CCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----cCCCCEEECcchhhhccccCC
Confidence            467899888642  22357899999999999999999999999999999999999    56678999999987654322 


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......++..|+|||.+.+
T Consensus       161 ~~~~~~~~~~~~~ape~~~~  180 (267)
T cd08229         161 TAAHSLVGTPYYMSPERIHE  180 (267)
T ss_pred             cccccccCCcCccCHHHhcC
Confidence             1223457788999998743

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.64  E-value=1e-15  Score=88.50  Aligned_cols=90  Identities=27%  Similarity=0.400  Sum_probs=72.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc----
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK----   77 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~----   77 (98)
                      .+++|.+++.+..  .+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+.....    
T Consensus        85 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~~~~~~  158 (265)
T cd06631          85 PGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVML----MPNGIIKLIDFGCARRLAWVGLH  158 (265)
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEE----CCCCeEEeccchhhHhhhhcccc
Confidence            5789999997654  68899999999999999999999999999999999999    6667899999998764321    


Q ss_pred             ----cccceecccccccCcccccC
Q psy11820         78 ----AVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 ----~~~~~~~~~~~~~~pe~~~~   97 (98)
                          .......++..|+|||.+.+
T Consensus       159 ~~~~~~~~~~~~~~~~~~pe~~~~  182 (265)
T cd06631         159 GTHSNMLKSMHGTPYWMAPEVINE  182 (265)
T ss_pred             ccccccccccCCCccccChhhhcC
Confidence                01123456778999998753

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.64  E-value=1.1e-15  Score=89.26  Aligned_cols=91  Identities=24%  Similarity=0.291  Sum_probs=68.7

Q ss_pred             cchhHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEe
Q psy11820          2 LEQNLYDFLKQN--------------KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI   67 (98)
Q Consensus         2 ~~~~L~~~~~~~--------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~   67 (98)
                      .+++|.+++...              ....++...+..++.|++.|+.|+|+.+++|+|+++.|+++    .....++++
T Consensus        91 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~----~~~~~~kl~  166 (283)
T cd05091          91 SHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLV----FDKLNVKIS  166 (283)
T ss_pred             CCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEe----cCCCceEec
Confidence            356778877421              11247788889999999999999999999999999999999    556679999


Q ss_pred             eecCceeecccc----cceecccccccCccccc
Q psy11820         68 DFGSASHVSKAV----CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        68 ~~g~~~~~~~~~----~~~~~~~~~~~~pe~~~   96 (98)
                      |||++.......    .....+++.|+|||.+.
T Consensus       167 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (283)
T cd05091         167 DLGLFREVYAADYYKLMGNSLLPIRWMSPEAIM  199 (283)
T ss_pred             ccccccccccchheeeccCccCCccccCHHHHh
Confidence            999876543211    12233456799999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.64  E-value=4.9e-16  Score=89.75  Aligned_cols=91  Identities=30%  Similarity=0.495  Sum_probs=74.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      .+++|.+++.... ..+++..+..++.+++.++.|+|+ .+++|+|+++.|+++    +..+.+++.|||.+........
T Consensus        82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~----~~~~~~~l~d~g~~~~~~~~~~  156 (265)
T cd06605          82 DGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILV----NSRGQIKLCDFGVSGQLVNSLA  156 (265)
T ss_pred             CCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEE----CCCCCEEEeecccchhhHHHHh
Confidence            4589999998653 368899999999999999999999 999999999999999    6667899999998765533222


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....++..|++||.+.+
T Consensus       157 ~~~~~~~~y~~PE~~~~  173 (265)
T cd06605         157 KTFVGTSSYMAPERIQG  173 (265)
T ss_pred             hcccCChhccCHHHHcC
Confidence            23556778999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.64  E-value=2.7e-15  Score=87.43  Aligned_cols=90  Identities=41%  Similarity=0.738  Sum_probs=74.1

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-ccc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCN   81 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~   81 (98)
                      +++|.+++.......+++..+..++.+++.++.|+|+++++|+|+++.|+++    +..+.++++|||.+...... ...
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i----~~~~~~~l~d~~~~~~~~~~~~~~  156 (283)
T cd07830          81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLV----SGPEVVKIADFGLAREIRSRPPYT  156 (283)
T ss_pred             CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE----cCCCCEEEeecccceeccCCCCcC
Confidence            6889998876654468999999999999999999999999999999999999    66778999999988755332 223


Q ss_pred             eecccccccCccccc
Q psy11820         82 TYLQSRYYRAPEIIL   96 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~   96 (98)
                      ...++..|+|||++.
T Consensus       157 ~~~~~~~~~aPE~~~  171 (283)
T cd07830         157 DYVSTRWYRAPEILL  171 (283)
T ss_pred             CCCCcccccCceeee
Confidence            345677899999764

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.64  E-value=1.5e-15  Score=88.20  Aligned_cols=91  Identities=26%  Similarity=0.296  Sum_probs=69.2

Q ss_pred             cchhHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEe
Q psy11820          2 LEQNLYDFLKQNK--------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI   67 (98)
Q Consensus         2 ~~~~L~~~~~~~~--------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~   67 (98)
                      .+++|.+++....              ...++++.+..++.+++.|++|+|+++++|+|+++.|+++    .....++++
T Consensus        79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili----~~~~~~kl~  154 (270)
T cd05047          79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV----GENYVAKIA  154 (270)
T ss_pred             CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE----cCCCeEEEC
Confidence            4789999986532              1247888999999999999999999999999999999999    666789999


Q ss_pred             eecCceeecccc-cceecccccccCccccc
Q psy11820         68 DFGSASHVSKAV-CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        68 ~~g~~~~~~~~~-~~~~~~~~~~~~pe~~~   96 (98)
                      |||++....... ......+..|+|||++.
T Consensus       155 dfgl~~~~~~~~~~~~~~~~~~y~apE~~~  184 (270)
T cd05047         155 DFGLSRGQEVYVKKTMGRLPVRWMAIESLN  184 (270)
T ss_pred             CCCCccccchhhhccCCCCccccCChHHHc
Confidence            999875322111 11112245699999864

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.64  E-value=1.6e-15  Score=87.25  Aligned_cols=89  Identities=31%  Similarity=0.433  Sum_probs=73.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-C   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~   80 (98)
                      .+++|.+++....  .+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+....... .
T Consensus        85 ~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~----~~~~~~kl~d~~~~~~~~~~~~~  158 (258)
T cd06632          85 PGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILV----DTNGVVKLADFGMAKQVVEFSFA  158 (258)
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEccCccceeccccccc
Confidence            4689999997654  68889999999999999999999999999999999999    666789999999876543222 2


Q ss_pred             ceecccccccCccccc
Q psy11820         81 NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~   96 (98)
                      ....++..|++||.+.
T Consensus       159 ~~~~~~~~y~~pe~~~  174 (258)
T cd06632         159 KSFKGSPYWMAPEVIA  174 (258)
T ss_pred             cccCCCcceeCHHHhc
Confidence            3445677899999764

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.64  E-value=1.4e-15  Score=89.50  Aligned_cols=89  Identities=26%  Similarity=0.397  Sum_probs=72.3

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++...   .+++..+..++.+++.|+.|||+.+++|+|+++.|+++    +..+.+++.|||++......  .
T Consensus        99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili----~~~~~~kl~dfg~~~~~~~~~~~  171 (296)
T cd06655          99 AGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLL----GMDGSVKLTDFGFCAQITPEQSK  171 (296)
T ss_pred             CCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEccCccchhccccccc
Confidence            578899988653   48899999999999999999999999999999999999    66678999999987654322  1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++..|+|||.+.+
T Consensus       172 ~~~~~~~~~y~aPE~~~~  189 (296)
T cd06655         172 RSTMVGTPYWMAPEVVTR  189 (296)
T ss_pred             CCCcCCCccccCcchhcC
Confidence            123356778999998753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.64  E-value=1.1e-15  Score=91.69  Aligned_cols=88  Identities=32%  Similarity=0.606  Sum_probs=70.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++...   .+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||++...... ..
T Consensus       104 ~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll----~~~~~~kl~dfg~~~~~~~~-~~  175 (345)
T cd07877         104 MGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV----NEDCELKILDFGLARHTDDE-MT  175 (345)
T ss_pred             cccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE----cCCCCEEEeccccccccccc-cc
Confidence            357787777543   48899999999999999999999999999999999999    66678999999988754322 23


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...+++.|+|||.+.+
T Consensus       176 ~~~~~~~y~aPE~~~~  191 (345)
T cd07877         176 GYVATRWYRAPEIMLN  191 (345)
T ss_pred             ccccCCCccCHHHHhC
Confidence            3456788999998643

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=1.3e-15  Score=88.83  Aligned_cols=90  Identities=30%  Similarity=0.394  Sum_probs=73.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++...+ ..+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||.+......  .
T Consensus        85 ~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili----~~~~~~~l~d~g~~~~~~~~~~~  159 (280)
T cd06611          85 DGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILL----TLDGDVKLADFGVSAKNKSTLQK  159 (280)
T ss_pred             CCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE----CCCCCEEEccCccchhhcccccc
Confidence            4778999887643 358999999999999999999999999999999999999    66678999999987644321  2


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....+++.|++||.+.
T Consensus       160 ~~~~~~~~~y~~PE~~~  176 (280)
T cd06611         160 RDTFIGTPYWMAPEVVA  176 (280)
T ss_pred             cceeecchhhcCHHHHh
Confidence            23345778899999864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.64  E-value=1.6e-15  Score=87.51  Aligned_cols=90  Identities=31%  Similarity=0.464  Sum_probs=72.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++....  .+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.++++|||.+........ 
T Consensus        82 ~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~----~~~~~~kl~d~g~~~~~~~~~~~  155 (264)
T cd06626          82 SGGTLEELLEHGR--ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFL----DHNGVIKLGDFGCAVKLKNNTTT  155 (264)
T ss_pred             CCCcHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEcccccccccCCCCCc
Confidence            4689999987653  57888999999999999999999999999999999999    5667899999998776532211 


Q ss_pred             -----ceecccccccCcccccC
Q psy11820         81 -----NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 -----~~~~~~~~~~~pe~~~~   97 (98)
                           ....++..|++||.+.+
T Consensus       156 ~~~~~~~~~~~~~~~~PE~~~~  177 (264)
T cd06626         156 MGEEVQSLAGTPAYMAPEVITG  177 (264)
T ss_pred             ccccccCCcCCcCccChhhccC
Confidence                 12346678999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.64  E-value=1.2e-15  Score=88.24  Aligned_cols=90  Identities=23%  Similarity=0.386  Sum_probs=72.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCC-ccEEEeeecCceeeccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP-YRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~-~~~~l~~~g~~~~~~~~--   78 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|+|+++++|+|+++.|+++    ... ..++++|||.+......  
T Consensus        86 ~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~----~~~~~~~~l~dfg~~~~~~~~~~  159 (268)
T cd06630          86 AGGSVSHLLSKYG--AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLI----DSTGQRLRIADFGAAARLAAKGT  159 (268)
T ss_pred             CCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEEcccccccccccccc
Confidence            5689999997654  68899999999999999999999999999999999999    433 36899999987654321  


Q ss_pred             ----ccceecccccccCcccccC
Q psy11820         79 ----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ----~~~~~~~~~~~~~pe~~~~   97 (98)
                          ......++..|+|||.+.+
T Consensus       160 ~~~~~~~~~~~~~~~~~PE~~~~  182 (268)
T cd06630         160 GAGEFQGQLLGTIAFMAPEVLRG  182 (268)
T ss_pred             cCCccccccccccceeCHhHhcc
Confidence                1123356778999998753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.64  E-value=1.3e-15  Score=88.11  Aligned_cols=92  Identities=22%  Similarity=0.343  Sum_probs=72.1

Q ss_pred             cchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc
Q psy11820          2 LEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~   79 (98)
                      .+++|.+++...  ....++.+.+..++.+++.|+.|+|+++++|+|+++.|+++    +..+.++++|||.+.......
T Consensus        85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~----~~~~~~~l~d~g~~~~~~~~~  160 (267)
T cd08228          85 DAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFI----TATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             CCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEE----cCCCCEEECccccceeccchh
Confidence            457888887532  22357888999999999999999999999999999999999    556689999999887653221


Q ss_pred             --cceecccccccCcccccC
Q psy11820         80 --CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 --~~~~~~~~~~~~pe~~~~   97 (98)
                        .....+++.|+|||.+.+
T Consensus       161 ~~~~~~~~~~~~~aPE~~~~  180 (267)
T cd08228         161 TAAHSLVGTPYYMSPERIHE  180 (267)
T ss_pred             HHHhcCCCCccccChhhhcc
Confidence              123456778999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.64  E-value=1.2e-15  Score=89.31  Aligned_cols=89  Identities=33%  Similarity=0.465  Sum_probs=72.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++..   ..++...+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.++++|||.+......  .
T Consensus        99 ~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~~l~d~g~~~~~~~~~~~  171 (285)
T cd06648          99 EGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILL----TSDGRVKLSDFGFCAQVSKEVPR  171 (285)
T ss_pred             CCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEE----cCCCcEEEcccccchhhccCCcc
Confidence            57899999876   258889999999999999999999999999999999999    66678999999977644321  1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|++||.+.+
T Consensus       172 ~~~~~~~~~y~aPE~~~~  189 (285)
T cd06648         172 RKSLVGTPYWMAPEVISR  189 (285)
T ss_pred             cccccCCccccCHHHhcC
Confidence            223457788999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.64  E-value=2.3e-15  Score=87.02  Aligned_cols=92  Identities=24%  Similarity=0.364  Sum_probs=73.5

Q ss_pred             cchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-
Q psy11820          2 LEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-   78 (98)
Q Consensus         2 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-   78 (98)
                      .+++|.+++...  ....++.+.+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||++...... 
T Consensus        85 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~----~~~~~~~l~d~~~~~~~~~~~  160 (267)
T cd08224          85 DAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFI----TATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             CCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEE----CCCCcEEEeccceeeeccCCC
Confidence            568999988643  22357899999999999999999999999999999999999    66678999999988755332 


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+++.|+|||.+.+
T Consensus       161 ~~~~~~~~~~~y~apE~~~~  180 (267)
T cd08224         161 TAAHSLVGTPYYMSPERIHE  180 (267)
T ss_pred             cccceecCCccccCHHHhcc
Confidence             1233456778999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.64  E-value=2e-15  Score=88.17  Aligned_cols=91  Identities=30%  Similarity=0.409  Sum_probs=72.0

Q ss_pred             cchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-
Q psy11820          2 LEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-   78 (98)
Q Consensus         2 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-   78 (98)
                      .+++|.+++...  ....+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||++...... 
T Consensus       103 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili----~~~~~~kl~dfg~~~~~~~~~  178 (286)
T cd06638         103 NGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILL----TTEGGVKLVDFGVSAQLTSTR  178 (286)
T ss_pred             CCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEE----CCCCCEEEccCCceeecccCC
Confidence            478898887532  22357888899999999999999999999999999999999    55667999999998765322 


Q ss_pred             -ccceecccccccCccccc
Q psy11820         79 -VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~   96 (98)
                       ......+++.|+|||++.
T Consensus       179 ~~~~~~~~~~~y~aPE~~~  197 (286)
T cd06638         179 LRRNTSVGTPFWMAPEVIA  197 (286)
T ss_pred             CccccccCCCcccChhhhc
Confidence             122345778899999863

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=1.2e-15  Score=88.25  Aligned_cols=90  Identities=26%  Similarity=0.361  Sum_probs=72.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc----
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK----   77 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~----   77 (98)
                      .+++|.+++....  .+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||.+.....    
T Consensus        89 ~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i----~~~~~~~l~dfg~~~~~~~~~~~  162 (264)
T cd06653          89 PGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILR----DSAGNVKLGDFGASKRIQTICMS  162 (264)
T ss_pred             CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE----cCCCCEEECcccccccccccccc
Confidence            4678999887654  58888999999999999999999999999999999999    5666899999998865421    


Q ss_pred             -cccceecccccccCcccccC
Q psy11820         78 -AVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 -~~~~~~~~~~~~~~pe~~~~   97 (98)
                       .......++..|+|||.+.+
T Consensus       163 ~~~~~~~~~~~~y~aPE~~~~  183 (264)
T cd06653         163 GTGIKSVTGTPYWMSPEVISG  183 (264)
T ss_pred             CccccccCCcccccCHhhhcC
Confidence             11123456788999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.64  E-value=1.7e-15  Score=87.49  Aligned_cols=93  Identities=25%  Similarity=0.298  Sum_probs=71.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCC----CCccEEEeeecCceeecc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR----QPYRVKVIDFGSASHVSK   77 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~----~~~~~~l~~~g~~~~~~~   77 (98)
                      .+++|.+++..... .+++.....++.|++.|+.|+|+.+++|+|+++.|+++.....    ....+++.|||.+.....
T Consensus        82 ~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~  160 (258)
T cd05078          82 KFGSLDTYLKKNKN-LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP  160 (258)
T ss_pred             CCCcHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCC
Confidence            57899999976542 5788889999999999999999999999999999999954221    122478999998754422


Q ss_pred             cccceecccccccCcccccC
Q psy11820         78 AVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 ~~~~~~~~~~~~~~pe~~~~   97 (98)
                      .  ....++..|+|||++.+
T Consensus       161 ~--~~~~~~~~y~aPE~~~~  178 (258)
T cd05078         161 K--EILLERIPWVPPECIEN  178 (258)
T ss_pred             c--hhccccCCccCchhccC
Confidence            1  23446678999998753

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.64  E-value=1.7e-15  Score=88.32  Aligned_cols=91  Identities=29%  Similarity=0.405  Sum_probs=71.2

Q ss_pred             chhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc
Q psy11820          3 EQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV   79 (98)
Q Consensus         3 ~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~-~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~   79 (98)
                      +++|.+++...  ....+++..+..++.|++.|+.|+|++ +++|+|+++.|+++    +..+.+++.|||.+.......
T Consensus        83 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~----~~~~~~kl~dfg~~~~~~~~~  158 (283)
T cd06617          83 DTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI----NRNGQVKLCDFGISGYLVDSV  158 (283)
T ss_pred             cccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE----CCCCCEEEeeccccccccccc
Confidence            46777777542  223688999999999999999999997 99999999999999    667789999999887553322


Q ss_pred             c-ceecccccccCcccccC
Q psy11820         80 C-NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~-~~~~~~~~~~~pe~~~~   97 (98)
                      . ....++..|+|||.+.+
T Consensus       159 ~~~~~~~~~~y~aPE~~~~  177 (283)
T cd06617         159 AKTIDAGCKPYMAPERINP  177 (283)
T ss_pred             ccccccCCccccChhhcCC
Confidence            1 22356778999998743

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.64  E-value=1.8e-15  Score=88.59  Aligned_cols=91  Identities=29%  Similarity=0.371  Sum_probs=72.0

Q ss_pred             cchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-
Q psy11820          2 LEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-   78 (98)
Q Consensus         2 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-   78 (98)
                      .+++|.+++...  ....+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||++...... 
T Consensus       107 ~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili----~~~~~~kl~dfg~~~~~~~~~  182 (291)
T cd06639         107 NGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILL----TTEGGVKLVDFGVSAQLTSTR  182 (291)
T ss_pred             CCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE----cCCCCEEEeecccchhccccc
Confidence            477899887632  23368899999999999999999999999999999999999    55668999999987754321 


Q ss_pred             -ccceecccccccCccccc
Q psy11820         79 -VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~   96 (98)
                       ......++..|++||++.
T Consensus       183 ~~~~~~~~~~~y~aPE~~~  201 (291)
T cd06639         183 LRRNTSVGTPFWMAPEVIA  201 (291)
T ss_pred             ccccCccCCccccChhhhc
Confidence             112335677899999864

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.64  E-value=1.6e-15  Score=89.29  Aligned_cols=89  Identities=27%  Similarity=0.395  Sum_probs=72.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++...   .+++..+..++.+++.++.|+|+.+++|+|+++.|+++    +..+.+++.|||.+.......  
T Consensus        99 ~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili----~~~~~~~l~Dfg~~~~~~~~~~~  171 (297)
T cd06656          99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL----GMDGSVKLTDFGFCAQITPEQSK  171 (297)
T ss_pred             CCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEECcCccceEccCCccC
Confidence            578999988653   47888999999999999999999999999999999999    666789999999887543221  


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|++||.+.+
T Consensus       172 ~~~~~~~~~y~aPE~~~~  189 (297)
T cd06656         172 RSTMVGTPYWMAPEVVTR  189 (297)
T ss_pred             cCcccCCccccCHHHHcC
Confidence            123456778999998753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.64  E-value=2.7e-15  Score=87.47  Aligned_cols=91  Identities=32%  Similarity=0.526  Sum_probs=73.1

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-CN   81 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~   81 (98)
                      +++|.+++.......+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||.+....... ..
T Consensus        89 ~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili----~~~~~~~l~dfg~~~~~~~~~~~~  164 (287)
T cd07838          89 DQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILV----TSDGQVKIADFGLARIYSFEMALT  164 (287)
T ss_pred             ccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEE----ccCCCEEEeccCcceeccCCcccc
Confidence            4578888876544468999999999999999999999999999999999999    566789999999887654321 12


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...++..|++||++.+
T Consensus       165 ~~~~~~~~~~PE~~~~  180 (287)
T cd07838         165 SVVVTLWYRAPEVLLQ  180 (287)
T ss_pred             cccccccccChHHhcc
Confidence            2345678999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.64  E-value=2.1e-15  Score=88.36  Aligned_cols=91  Identities=31%  Similarity=0.576  Sum_probs=70.7

Q ss_pred             chhHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCC-CccEEEeeecCceeeccc
Q psy11820          3 EQNLYDFLKQNK---FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ-PYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         3 ~~~L~~~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~-~~~~~l~~~g~~~~~~~~   78 (98)
                      .++|.+++....   ...+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +. .+.+++.|||++......
T Consensus        89 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~----~~~~~~~kl~dfg~~~~~~~~  164 (295)
T cd07837          89 DSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLV----DKQKGLLKIADLGLGRAFSIP  164 (295)
T ss_pred             CcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE----ecCCCeEEEeecccceecCCC
Confidence            357888876432   2357899999999999999999999999999999999999    44 668999999988754322


Q ss_pred             --ccceecccccccCcccccC
Q psy11820         79 --VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~~   97 (98)
                        ......+++.|+|||++.+
T Consensus       165 ~~~~~~~~~~~~~~aPE~~~~  185 (295)
T cd07837         165 VKSYTHEIVTLWYRAPEVLLG  185 (295)
T ss_pred             ccccCCcccccCCCChHHhhC
Confidence              1122345678999998753

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.64  E-value=2.3e-15  Score=87.26  Aligned_cols=91  Identities=24%  Similarity=0.295  Sum_probs=70.2

Q ss_pred             cchhHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc
Q psy11820          2 LEQNLYDFLKQNK----FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK   77 (98)
Q Consensus         2 ~~~~L~~~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~   77 (98)
                      .+++|.+++....    ...+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    .....++++|||.+.....
T Consensus        90 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~dfg~~~~~~~  165 (273)
T cd05035          90 KHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML----REDMTVCVADFGLSKKIYS  165 (273)
T ss_pred             CCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEE----CCCCeEEECCccceeeccc
Confidence            5678888875431    2357889999999999999999999999999999999999    5667899999999876532


Q ss_pred             ccc----ceecccccccCccccc
Q psy11820         78 AVC----NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        78 ~~~----~~~~~~~~~~~pe~~~   96 (98)
                      ...    .....+..|++||++.
T Consensus       166 ~~~~~~~~~~~~~~~~~~pe~~~  188 (273)
T cd05035         166 GDYYRQGRIAKMPVKWIAIESLA  188 (273)
T ss_pred             cccccccccccCCccccCHhhcc
Confidence            211    1122345799999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>KOG0983|consensus

Probab=99.64  E-value=1.6e-15  Score=87.77  Aligned_cols=89  Identities=30%  Similarity=0.460  Sum_probs=72.4

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-c
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-C   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~   80 (98)
                      ...++.++.+.. .++++..+-.+...++.|+.||.+ ++++|||++|.||++    +.++.+|+.|||++-.+..+. .
T Consensus       174 s~C~ekLlkrik-~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl----De~GniKlCDFGIsGrlvdSkAh  248 (391)
T KOG0983|consen  174 STCAEKLLKRIK-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL----DERGNIKLCDFGISGRLVDSKAH  248 (391)
T ss_pred             HHHHHHHHHHhc-CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE----ccCCCEEeecccccceeeccccc
Confidence            345566666553 468888888999999999999986 689999999999999    888899999999987765543 3


Q ss_pred             ceecccccccCccccc
Q psy11820         81 NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~   96 (98)
                      ....|.+.|||||.+.
T Consensus       249 trsAGC~~YMaPERid  264 (391)
T KOG0983|consen  249 TRSAGCAAYMAPERID  264 (391)
T ss_pred             ccccCCccccCccccC
Confidence            4456888999999875

>KOG0596|consensus

Probab=99.64  E-value=1.1e-15  Score=94.71  Aligned_cols=89  Identities=31%  Similarity=0.496  Sum_probs=70.6

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc----
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----   78 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~----   78 (98)
                      +-+|..++..... ....-.+.++-.|++.++.+.|..||+|.|++|.|+++     ..+.+||.|||++......    
T Consensus       443 d~DL~kiL~k~~~-~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-----VkG~LKLIDFGIA~aI~~DTTsI  516 (677)
T KOG0596|consen  443 DIDLNKILKKKKS-IDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-----VKGRLKLIDFGIANAIQPDTTSI  516 (677)
T ss_pred             cccHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-----EeeeEEeeeechhcccCccccce
Confidence            3478888876542 23323788999999999999999999999999999997     4568999999998765432    


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ...+-+||+.||+||.+..
T Consensus       517 ~kdsQvGT~NYMsPEAl~~  535 (677)
T KOG0596|consen  517 VKDSQVGTVNYMSPEALTD  535 (677)
T ss_pred             eeccccCcccccCHHHHhh
Confidence            2345579999999998763

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.63  E-value=3e-15  Score=87.77  Aligned_cols=90  Identities=27%  Similarity=0.427  Sum_probs=72.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|..++.... ..+++..+..++.|++.++.|+|+.+++|+|+++.|+++    ...+.+++.|||++......  .
T Consensus        92 ~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~kl~dfg~~~~~~~~~~~  166 (292)
T cd06644          92 PGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLL----TLDGDIKLADFGVSAKNVKTLQR  166 (292)
T ss_pred             CCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEE----cCCCCEEEccCccceeccccccc
Confidence            4678888775543 358899999999999999999999999999999999999    55668999999987653221  2


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....+++.|++||.+.
T Consensus       167 ~~~~~~~~~y~aPE~~~  183 (292)
T cd06644         167 RDSFIGTPYWMAPEVVM  183 (292)
T ss_pred             cceecCCccccCceeec
Confidence            23445778899999874

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.63  E-value=1.4e-15  Score=90.77  Aligned_cols=88  Identities=34%  Similarity=0.631  Sum_probs=71.7

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc---
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV---   79 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~---   79 (98)
                      +++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.|+++    ...+.++++|||++.......   
T Consensus        91 ~~~l~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~----~~~~~~kl~dfg~~~~~~~~~~~~  164 (334)
T cd07855          91 ESDLHHIIHSDQ--PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV----NEDCELRIGDFGMARGLSSSPTEH  164 (334)
T ss_pred             hhhHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----cCCCcEEecccccceeecccCcCC
Confidence            467888886544  58999999999999999999999999999999999999    667789999999887543211   


Q ss_pred             ---cceecccccccCccccc
Q psy11820         80 ---CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ---~~~~~~~~~~~~pe~~~   96 (98)
                         .....++..|++||.+.
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~  184 (334)
T cd07855         165 KYFMTEYVATRWYRAPELLL  184 (334)
T ss_pred             CcccccccccccccChHHhc
Confidence               12345778899999864

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.63  E-value=1.5e-15  Score=89.44  Aligned_cols=90  Identities=27%  Similarity=0.523  Sum_probs=71.7

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      .++|.+++.... ..++...+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++++|||++......  ..
T Consensus        87 ~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~dfg~~~~~~~~~~~~  161 (301)
T cd07873          87 DKDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLI----NERGELKLADFGLARAKSIPTKTY  161 (301)
T ss_pred             ccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEE----CCCCcEEECcCcchhccCCCCCcc
Confidence            468888886543 257889999999999999999999999999999999999    66678999999988654321  12


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       162 ~~~~~~~~y~~PE~~~~  178 (301)
T cd07873         162 SNEVVTLWYRPPDILLG  178 (301)
T ss_pred             cccceeecccCcHHHhC
Confidence            23346788999998753

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.63  E-value=1.8e-15  Score=88.16  Aligned_cols=92  Identities=20%  Similarity=0.231  Sum_probs=71.6

Q ss_pred             cchhHHHHHhhCCC------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820          2 LEQNLYDFLKQNKF------SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus         2 ~~~~L~~~~~~~~~------~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      .+++|.+++.....      ..+++..+..++.+++.|+.|+|+++++|+|+++.|+++    .....++++|||+++..
T Consensus        92 ~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~----~~~~~~kl~d~g~~~~~  167 (280)
T cd05043          92 NWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVI----DEELQVKITDNALSRDL  167 (280)
T ss_pred             CCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEE----cCCCcEEECCCCCcccc
Confidence            46899999875432      358899999999999999999999999999999999999    56678999999998754


Q ss_pred             cccc----cceecccccccCcccccC
Q psy11820         76 SKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        76 ~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      ....    .....++..|+|||.+.+
T Consensus       168 ~~~~~~~~~~~~~~~~~y~apE~~~~  193 (280)
T cd05043         168 FPMDYHCLGDNENRPVKWMALESLVN  193 (280)
T ss_pred             cCCceEEeCCCCCcchhccCHHHHhc
Confidence            2211    111234556999998653

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.63  E-value=2.2e-15  Score=88.47  Aligned_cols=92  Identities=23%  Similarity=0.353  Sum_probs=69.7

Q ss_pred             CcchhHHHHHhhCCC----------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeec
Q psy11820          1 MLEQNLYDFLKQNKF----------SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG   70 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~----------~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g   70 (98)
                      +.+++|.+++.....          ..+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.++++|||
T Consensus        99 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill----~~~~~~kl~dfg  174 (295)
T cd05097          99 MENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV----GNHYTIKIADFG  174 (295)
T ss_pred             CCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE----cCCCcEEecccc
Confidence            357889998864321          136778889999999999999999999999999999999    556689999999


Q ss_pred             Cceeecccc----cceecccccccCccccc
Q psy11820         71 SASHVSKAV----CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        71 ~~~~~~~~~----~~~~~~~~~~~~pe~~~   96 (98)
                      ++.......    .....++..|+|||++.
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  204 (295)
T cd05097         175 MSRNLYSGDYYRIQGRAVLPIRWMAWESIL  204 (295)
T ss_pred             cccccccCcceeccCcCcCceeecChhhhc
Confidence            886542211    11223356799999865

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.63  E-value=2.3e-15  Score=87.50  Aligned_cols=91  Identities=23%  Similarity=0.265  Sum_probs=70.8

Q ss_pred             cchhHHHHHhhCCC-------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820          2 LEQNLYDFLKQNKF-------SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus         2 ~~~~L~~~~~~~~~-------~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .+++|.+++.....       ..+++..+..++.+++.|++|+|+.+++|+|+++.|+++    ...+.+++++||++..
T Consensus        91 ~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili----~~~~~~~l~~~~~~~~  166 (275)
T cd05046          91 DLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLV----SSQREVKVSLLSLSKD  166 (275)
T ss_pred             CCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEE----eCCCcEEEcccccccc
Confidence            46899999875431       158899999999999999999999999999999999999    5566889999998764


Q ss_pred             eccc---ccceecccccccCccccc
Q psy11820         75 VSKA---VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        75 ~~~~---~~~~~~~~~~~~~pe~~~   96 (98)
                      ....   ......++..|++||.+.
T Consensus       167 ~~~~~~~~~~~~~~~~~y~~PE~~~  191 (275)
T cd05046         167 VYNSEYYKLRNALIPLRWLAPEAVQ  191 (275)
T ss_pred             cCcccccccCCceeEEeecChhhhc
Confidence            3221   112224456799999765

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.63  E-value=1.7e-15  Score=88.01  Aligned_cols=91  Identities=21%  Similarity=0.340  Sum_probs=70.5

Q ss_pred             cchhHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820          2 LEQNLYDFLKQNK--------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus         2 ~~~~L~~~~~~~~--------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      .+++|.+++....        ...+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||++.
T Consensus        92 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill----~~~~~~kl~dfg~~~  167 (277)
T cd05032          92 AKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMV----AEDLTVKIGDFGMTR  167 (277)
T ss_pred             CCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEE----cCCCCEEECCcccch
Confidence            4689999986532        1236778889999999999999999999999999999999    666789999999886


Q ss_pred             eecccc----cceecccccccCccccc
Q psy11820         74 HVSKAV----CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        74 ~~~~~~----~~~~~~~~~~~~pe~~~   96 (98)
                      ......    .....++..|+|||.+.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  194 (277)
T cd05032         168 DIYETDYYRKGGKGLLPVRWMAPESLK  194 (277)
T ss_pred             hhccCcccccCCCCCccccccCHHHHh
Confidence            543211    12223456799999865

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.63  E-value=2.3e-15  Score=87.82  Aligned_cols=91  Identities=33%  Similarity=0.574  Sum_probs=72.7

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      +++|.+++.......+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||.+......  ..
T Consensus        82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill----~~~~~~~l~dfg~~~~~~~~~~~~  157 (284)
T cd07860          82 HQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAIKLADFGLARAFGVPVRTY  157 (284)
T ss_pred             ccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCCEEEeeccchhhcccCcccc
Confidence            4678888876555578999999999999999999999999999999999999    66678999999987654322  11


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....++..|+|||.+.+
T Consensus       158 ~~~~~~~~y~aPE~~~~  174 (284)
T cd07860         158 THEVVTLWYRAPEILLG  174 (284)
T ss_pred             ccccccccccCCeEEec
Confidence            22345678999997653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.63  E-value=2.1e-15  Score=86.96  Aligned_cols=90  Identities=31%  Similarity=0.470  Sum_probs=74.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      .+++|.+++....  .+++..+..++.+++.++.|+|+ .+++|+|+++.|+++    ...+.++++|||.+........
T Consensus        82 ~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~----~~~~~~~l~df~~~~~~~~~~~  155 (264)
T cd06623          82 DGGSLADLLKKVG--KIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI----NSKGEVKIADFGISKVLENTLD  155 (264)
T ss_pred             CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEE----CCCCCEEEccCccceecccCCC
Confidence            4689999998653  68999999999999999999999 999999999999999    6677899999998876543221


Q ss_pred             --ceecccccccCcccccC
Q psy11820         81 --NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 --~~~~~~~~~~~pe~~~~   97 (98)
                        ....++..|++||.+.+
T Consensus       156 ~~~~~~~~~~y~~pE~~~~  174 (264)
T cd06623         156 QCNTFVGTVTYMSPERIQG  174 (264)
T ss_pred             cccceeecccccCHhhhCC
Confidence              24456778999998653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.63  E-value=2.2e-15  Score=87.93  Aligned_cols=91  Identities=25%  Similarity=0.308  Sum_probs=69.3

Q ss_pred             cchhHHHHHhhCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEE
Q psy11820          2 LEQNLYDFLKQNK---------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKV   66 (98)
Q Consensus         2 ~~~~L~~~~~~~~---------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l   66 (98)
                      .+++|.+++....               ...+++..+..++.+++.|+.|+|+++++|+|+++.|+++    +....+++
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili----~~~~~~kl  165 (283)
T cd05090          90 NQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI----GEQLHVKI  165 (283)
T ss_pred             CCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEE----cCCCcEEe
Confidence            4678999885321               1246788889999999999999999999999999999999    55667999


Q ss_pred             eeecCceeeccc----ccceecccccccCccccc
Q psy11820         67 IDFGSASHVSKA----VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        67 ~~~g~~~~~~~~----~~~~~~~~~~~~~pe~~~   96 (98)
                      .|||++......    ......++..|+|||.+.
T Consensus       166 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (283)
T cd05090         166 SDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIM  199 (283)
T ss_pred             ccccccccccCCcceecccCCCccceecChHHhc
Confidence            999988654221    112223455699999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.63  E-value=1.8e-15  Score=88.58  Aligned_cols=90  Identities=28%  Similarity=0.528  Sum_probs=71.2

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      .++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.++++|||.+......  ..
T Consensus        86 ~~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~----~~~~~~kl~dfg~~~~~~~~~~~~  160 (291)
T cd07844          86 DTDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLI----SERGELKLADFGLARAKSVPSKTY  160 (291)
T ss_pred             CCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEE----cCCCCEEECccccccccCCCCccc
Confidence            458888887653 258899999999999999999999999999999999999    66678999999987654221  11


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....++..|+|||++.+
T Consensus       161 ~~~~~~~~~~aPE~~~~  177 (291)
T cd07844         161 SNEVVTLWYRPPDVLLG  177 (291)
T ss_pred             cccccccccCCcHHhhc
Confidence            22235677999998753

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.63  E-value=2.3e-15  Score=86.65  Aligned_cols=92  Identities=26%  Similarity=0.393  Sum_probs=73.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++.......+++..+..++.+++.|+.|+|+++++|+|+++.|+++    +....+++.|||.+......  .
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~----~~~~~~~l~d~~~~~~~~~~~~~  157 (256)
T cd08218          82 EGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL----TKDGTIKLGDFGIARVLNSTVEL  157 (256)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE----cCCCCEEEeeccceeecCcchhh
Confidence            57889998876544457888999999999999999999999999999999999    55668999999988755322  1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       158 ~~~~~~~~~~~~pe~~~~  175 (256)
T cd08218         158 ARTCIGTPYYLSPEICEN  175 (256)
T ss_pred             hhhccCCccccCHHHhCC
Confidence            123346778999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=2.9e-15  Score=85.87  Aligned_cols=89  Identities=30%  Similarity=0.475  Sum_probs=73.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++....  .+++..+..++.+++.++.++|+.+++|+|+++.|+++    ...+.+++.|||.+........ 
T Consensus        82 ~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i----~~~~~~~l~d~~~~~~~~~~~~~  155 (254)
T cd06627          82 ENGSLRQIIKKFG--PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT----TKDGVVKLADFGVATKLNDVSKD  155 (254)
T ss_pred             CCCcHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE----CCCCCEEEeccccceecCCCccc
Confidence            4678999987653  68999999999999999999999999999999999999    5567899999998876543221 


Q ss_pred             -ceecccccccCccccc
Q psy11820         81 -NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 -~~~~~~~~~~~pe~~~   96 (98)
                       ....++..|++||...
T Consensus       156 ~~~~~~~~~y~~pe~~~  172 (254)
T cd06627         156 DASVVGTPYWMAPEVIE  172 (254)
T ss_pred             ccccccchhhcCHhhhc
Confidence             2345677899999764

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.63  E-value=1.6e-15  Score=91.18  Aligned_cols=87  Identities=37%  Similarity=0.685  Sum_probs=69.9

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-CN   81 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~   81 (98)
                      +++|.+++..    .++...+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.++++|||.+....... ..
T Consensus       104 ~~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~----~~~~~~kL~Dfg~~~~~~~~~~~~  175 (353)
T cd07850         104 DANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAGTSFMMT  175 (353)
T ss_pred             CCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE----CCCCCEEEccCccceeCCCCCCCC
Confidence            4567777653    27888899999999999999999999999999999999    666789999999987654322 12


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...+++.|+|||.+.+
T Consensus       176 ~~~~~~~y~aPE~~~~  191 (353)
T cd07850         176 PYVVTRYYRAPEVILG  191 (353)
T ss_pred             CCcccccccCHHHHhC
Confidence            3456778999998754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.63  E-value=2.1e-15  Score=86.95  Aligned_cols=91  Identities=27%  Similarity=0.432  Sum_probs=74.2

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+++|.+++....  .+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||.+...... .
T Consensus        82 ~~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~----~~~~~~~l~d~~~~~~~~~~~~  155 (258)
T cd05578          82 LLGGDLRYHLSQKV--KFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL----DEQGHVHITDFNIATKVTPDTL  155 (258)
T ss_pred             CCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE----cCCCCEEEeecccccccCCCcc
Confidence            35789999997653  68899999999999999999999999999999999999    66678999999987755332 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++..|++||.+.+
T Consensus       156 ~~~~~~~~~y~~PE~~~~  173 (258)
T cd05578         156 TTSTSGTPGYMAPEVLCR  173 (258)
T ss_pred             ccccCCChhhcCHHHHcc
Confidence            233456678999998753

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.63  E-value=2.7e-15  Score=87.10  Aligned_cols=90  Identities=24%  Similarity=0.353  Sum_probs=72.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++....  .++...+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||++......   
T Consensus        91 ~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~----~~~~~~~l~d~~~~~~~~~~~~~  164 (272)
T cd06629          91 PGGSIGSCLRTYG--RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV----DADGICKISDFGISKKSDDIYDN  164 (272)
T ss_pred             CCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEE----cCCCeEEEeeccccccccccccc
Confidence            5789999987653  68889999999999999999999999999999999999    66678999999988654321   


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......++..|++||.+..
T Consensus       165 ~~~~~~~~~~~y~~PE~~~~  184 (272)
T cd06629         165 DQNMSMQGSVFWMAPEVIHS  184 (272)
T ss_pred             cccccccCCccccCHHHhcc
Confidence             1123346778999998653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.63  E-value=2e-15  Score=88.71  Aligned_cols=89  Identities=27%  Similarity=0.399  Sum_probs=72.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++...   .++...+..++.+++.|+.|+|+++++|+|+++.|+++    ...+.++++|||++......  .
T Consensus        99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili----~~~~~~kL~dfg~~~~~~~~~~~  171 (293)
T cd06647          99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL----GMDGSVKLTDFGFCAQITPEQSK  171 (293)
T ss_pred             CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEE----cCCCCEEEccCcceecccccccc
Confidence            578999998754   47888999999999999999999999999999999999    56668999999987654322  1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|++||.+.+
T Consensus       172 ~~~~~~~~~y~~PE~~~~  189 (293)
T cd06647         172 RSTMVGTPYWMAPEVVTR  189 (293)
T ss_pred             cccccCChhhcCchhhcc
Confidence            223456778999998753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.63  E-value=4e-15  Score=89.20  Aligned_cols=76  Identities=30%  Similarity=0.314  Sum_probs=59.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc----cceecccccccCcc
Q psy11820         18 LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV----CNTYLQSRYYRAPE   93 (98)
Q Consensus        18 l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~----~~~~~~~~~~~~pe   93 (98)
                      ++...+..++.|++.|+.|+|+++++|+|+++.|+++    +....++++|||++.......    .....++..|+|||
T Consensus       176 ~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~----~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  251 (343)
T cd05103         176 LTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILL----SENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE  251 (343)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEE----cCCCcEEEEecccccccccCcchhhcCCCCCCcceECcH
Confidence            5677788899999999999999999999999999999    566689999999886542211    11223345699999


Q ss_pred             cccC
Q psy11820         94 IILG   97 (98)
Q Consensus        94 ~~~~   97 (98)
                      .+.+
T Consensus       252 ~~~~  255 (343)
T cd05103         252 TIFD  255 (343)
T ss_pred             HhcC
Confidence            8643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.63  E-value=1.6e-15  Score=100.05  Aligned_cols=96  Identities=27%  Similarity=0.425  Sum_probs=73.5

Q ss_pred             cchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHc-------CCcccCCCCCcEEEecCC-------------C
Q psy11820          2 LEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQL-------GLIHADLKPENIMLVDPV-------------R   59 (98)
Q Consensus         2 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~-------~~~h~~l~~~~~~~~~~~-------------~   59 (98)
                      .+++|.+++...  ....+++..++.++.||+.||.|||+.       +|+|+||+|.||++....             .
T Consensus        97 ~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~n  176 (1021)
T PTZ00266         97 DAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLN  176 (1021)
T ss_pred             CCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccC
Confidence            468999988653  234689999999999999999999984       499999999999994321             1


Q ss_pred             CCccEEEeeecCceeeccc-ccceecccccccCcccccC
Q psy11820         60 QPYRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        60 ~~~~~~l~~~g~~~~~~~~-~~~~~~~~~~~~~pe~~~~   97 (98)
                      ....++|+|||++...... ......+++.|+|||++.+
T Consensus       177 g~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~g  215 (1021)
T PTZ00266        177 GRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLH  215 (1021)
T ss_pred             CCCceEEccCCccccccccccccccCCCccccCHHHHhc
Confidence            2335899999998765432 2234568899999998753

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=2.8e-15  Score=87.22  Aligned_cols=88  Identities=33%  Similarity=0.586  Sum_probs=72.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++...   .+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||.+......  .
T Consensus        85 ~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i----~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06917          85 EGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILV----TNTGNVKLCDFGVAALLNQNSSK  157 (277)
T ss_pred             CCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEE----cCCCCEEEccCCceeecCCCccc
Confidence            478999988653   58899999999999999999999999999999999999    55678999999988765332  1


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....++..|+|||.+.
T Consensus       158 ~~~~~~~~~y~aPE~~~  174 (277)
T cd06917         158 RSTFVGTPYWMAPEVIT  174 (277)
T ss_pred             cccccCCcceeCHHHhc
Confidence            23345777899999864

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.62  E-value=1.9e-15  Score=90.29  Aligned_cols=87  Identities=36%  Similarity=0.627  Sum_probs=69.5

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc----
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----   78 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~----   78 (98)
                      .++|.+++...   .+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||++......    
T Consensus        91 ~~~l~~~~~~~---~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill----~~~~~~kl~dfg~~~~~~~~~~~~  163 (336)
T cd07849          91 ETDLYKLIKTQ---HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLL----NTNCDLKICDFGLARIADPEHDHT  163 (336)
T ss_pred             ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE----CCCCCEEECcccceeecccccccc
Confidence            45677777543   58899999999999999999999999999999999999    66778999999988654321    


Q ss_pred             -ccceecccccccCccccc
Q psy11820         79 -VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~   96 (98)
                       ......+++.|+|||.+.
T Consensus       164 ~~~~~~~~~~~y~aPE~~~  182 (336)
T cd07849         164 GFLTEYVATRWYRAPEIML  182 (336)
T ss_pred             CCcCCcCcCCCccChHHhh
Confidence             112345678899999764

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.62  E-value=4.3e-15  Score=86.20  Aligned_cols=90  Identities=27%  Similarity=0.287  Sum_probs=71.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-C   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~   80 (98)
                      .+++|.+++.... ..+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||++....... .
T Consensus        89 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili----~~~~~~~l~d~g~~~~~~~~~~~  163 (270)
T cd05056          89 PLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLV----SSPDCVKLGDFGLSRYLEDESYY  163 (270)
T ss_pred             CCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEE----ecCCCeEEccCceeeecccccce
Confidence            4789999997643 258899999999999999999999999999999999999    556689999999887653221 1


Q ss_pred             --ceecccccccCccccc
Q psy11820         81 --NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 --~~~~~~~~~~~pe~~~   96 (98)
                        ....++..|+|||.+.
T Consensus       164 ~~~~~~~~~~y~aPE~~~  181 (270)
T cd05056         164 KASKGKLPIKWMAPESIN  181 (270)
T ss_pred             ecCCCCccccccChhhhc
Confidence              1122345699999764

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.62  E-value=2e-15  Score=88.25  Aligned_cols=90  Identities=27%  Similarity=0.490  Sum_probs=73.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      .+++|.+++...+  .++...+..++.+++.++.|+|+ .+++|+|+++.|+++    ...+.+++.|||++........
T Consensus        86 ~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~----~~~~~~~l~d~gl~~~~~~~~~  159 (284)
T cd06620          86 DCGSLDRIYKKGG--PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILV----NSRGQIKLCDFGVSGELINSIA  159 (284)
T ss_pred             CCCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEE----CCCCcEEEccCCcccchhhhcc
Confidence            5788999887644  68899999999999999999997 689999999999999    5667899999998765433222


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....++..|++||++.+
T Consensus       160 ~~~~~~~~~~aPE~~~~  176 (284)
T cd06620         160 DTFVGTSTYMSPERIQG  176 (284)
T ss_pred             CccccCcccCCHHHHcc
Confidence            34467788999998753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.62  E-value=4.1e-15  Score=86.16  Aligned_cols=90  Identities=21%  Similarity=0.306  Sum_probs=70.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++.... +.+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    .....++++|||++.........
T Consensus        89 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili----~~~~~~kl~dfg~~~~~~~~~~~  163 (268)
T cd05063          89 ENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILV----NSNLECKVSDFGLSRVLEDDPEG  163 (268)
T ss_pred             CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEE----cCCCcEEECCCccceeccccccc
Confidence            5689999987643 368899999999999999999999999999999999999    56668999999988765322111


Q ss_pred             e-----ecccccccCccccc
Q psy11820         82 T-----YLQSRYYRAPEIIL   96 (98)
Q Consensus        82 ~-----~~~~~~~~~pe~~~   96 (98)
                      .     ...+..|++||.+.
T Consensus       164 ~~~~~~~~~~~~y~~PE~~~  183 (268)
T cd05063         164 TYTTSGGKIPIRWTAPEAIA  183 (268)
T ss_pred             ceeccCCCcCceecCHHHhh
Confidence            1     11234699999765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.62  E-value=1.9e-15  Score=90.35  Aligned_cols=88  Identities=31%  Similarity=0.570  Sum_probs=72.1

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      +++|.+++....  .+++..+..++.|++.|+.|+|+++++|+|+++.|+++    +..+.+++.|||++......  ..
T Consensus        92 ~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~----~~~~~~kL~Dfg~~~~~~~~~~~~  165 (337)
T cd07858          92 DTDLHQIIRSSQ--TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLL----NANCDLKICDFGLARTTSEKGDFM  165 (337)
T ss_pred             CCCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE----cCCCCEEECcCccccccCCCcccc
Confidence            467888887544  68999999999999999999999999999999999999    66678999999988754322  12


Q ss_pred             ceecccccccCccccc
Q psy11820         81 NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~   96 (98)
                      ....++..|+|||.+.
T Consensus       166 ~~~~~~~~y~aPE~~~  181 (337)
T cd07858         166 TEYVVTRWYRAPELLL  181 (337)
T ss_pred             cccccccCccChHHHh
Confidence            2345677899999764

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.62  E-value=4.1e-15  Score=87.09  Aligned_cols=93  Identities=22%  Similarity=0.339  Sum_probs=69.7

Q ss_pred             CcchhHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCc
Q psy11820          1 MLEQNLYDFLKQNK--------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA   72 (98)
Q Consensus         1 ~~~~~L~~~~~~~~--------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~   72 (98)
                      +.+|+|.+++....        ....+...+..++.+++.|+.|+|+++++|+|+++.|+++    .....++++|||++
T Consensus        91 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili----~~~~~~~L~Dfg~~  166 (288)
T cd05061          91 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV----AHDFTVKIGDFGMT  166 (288)
T ss_pred             CCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEE----cCCCcEEECcCCcc
Confidence            35789999997532        1234567788899999999999999999999999999999    56678999999988


Q ss_pred             eeecccc----cceecccccccCcccccC
Q psy11820         73 SHVSKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        73 ~~~~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      .......    .....++..|++||.+.+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~  195 (288)
T cd05061         167 RDIYETDYYRKGGKGLLPVRWMAPESLKD  195 (288)
T ss_pred             ccccccccccccCCCcccccccCHHHhcc
Confidence            6542211    111223556999998753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.62  E-value=3.8e-15  Score=86.86  Aligned_cols=91  Identities=27%  Similarity=0.500  Sum_probs=72.4

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      +++|.+++.......+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||.+......  ..
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~----~~~~~~~l~df~~~~~~~~~~~~~  156 (283)
T cd07835          81 DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLI----DREGALKLADFGLARAFGVPVRTY  156 (283)
T ss_pred             CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE----cCCCcEEEeecccccccCCCcccc
Confidence            4678888876544468899999999999999999999999999999999999    55678999999988654321  11


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....++..|+|||++.+
T Consensus       157 ~~~~~~~~~~aPE~~~~  173 (283)
T cd07835         157 THEVVTLWYRAPEILLG  173 (283)
T ss_pred             CccccccCCCCCceeec
Confidence            22345678999998653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.62  E-value=2.8e-15  Score=89.44  Aligned_cols=89  Identities=28%  Similarity=0.458  Sum_probs=71.2

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc-----
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-----   77 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-----   77 (98)
                      .++|.+++....  .++.+.+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+.....     
T Consensus       103 ~~~l~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill----~~~~~~kl~dfg~~~~~~~~~~~~  176 (335)
T PTZ00024        103 ASDLKKVVDRKI--RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFI----NSKGICKIADFGLARRYGYPPYSD  176 (335)
T ss_pred             ccCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEE----CCCCCEEECCccceeecccccccc
Confidence            578888887644  58899999999999999999999999999999999999    6667899999998865431     


Q ss_pred             -----------cccceecccccccCcccccC
Q psy11820         78 -----------AVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 -----------~~~~~~~~~~~~~~pe~~~~   97 (98)
                                 .......+++.|+|||.+.+
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  207 (335)
T PTZ00024        177 TLSKDETMQRREEMTSKVVTLWYRAPELLMG  207 (335)
T ss_pred             cccccccccccccccccccccCCCCChhccc
Confidence                       01112235677999998754

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.62  E-value=2.3e-15  Score=87.64  Aligned_cols=89  Identities=34%  Similarity=0.528  Sum_probs=71.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++...   .+++..+..++.+++.|+.|+|+++++|+|+++.|+++    ...+.+++.|||++.......  
T Consensus        85 ~~~~L~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i----~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06642          85 GGGSALDLLKPG---PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLL----SEQGDVKLADFGVAGQLTDTQIK  157 (277)
T ss_pred             CCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEE----eCCCCEEEccccccccccCcchh
Confidence            568899888643   58899999999999999999999999999999999999    556689999999887553321  


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++..|++||.+.+
T Consensus       158 ~~~~~~~~~y~aPE~~~~  175 (277)
T cd06642         158 RNTFVGTPFWMAPEVIKQ  175 (277)
T ss_pred             hhcccCcccccCHHHhCc
Confidence            122346778999998754

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.62  E-value=3.7e-15  Score=87.61  Aligned_cols=91  Identities=20%  Similarity=0.314  Sum_probs=69.5

Q ss_pred             cchhHHHHHhhCCC---------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCc
Q psy11820          2 LEQNLYDFLKQNKF---------SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA   72 (98)
Q Consensus         2 ~~~~L~~~~~~~~~---------~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~   72 (98)
                      .+++|.+++.....         ..+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||++
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili----~~~~~~~l~dfg~~  177 (296)
T cd05095         102 ENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV----GKNYTIKIADFGMS  177 (296)
T ss_pred             CCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEE----cCCCCEEeccCccc
Confidence            46899999875431         236677899999999999999999999999999999999    56678999999988


Q ss_pred             eeecccc----cceecccccccCccccc
Q psy11820         73 SHVSKAV----CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        73 ~~~~~~~----~~~~~~~~~~~~pe~~~   96 (98)
                      .......    ......+..|++||...
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~  205 (296)
T cd05095         178 RNLYSGDYYRIQGRAVLPIRWMSWESIL  205 (296)
T ss_pred             ccccCCcceeccCcCcCccccCCHHHHh
Confidence            7543211    11222346799998654

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.62  E-value=4.1e-15  Score=86.68  Aligned_cols=93  Identities=20%  Similarity=0.252  Sum_probs=70.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCC---CCCccEEEeeecCceeecc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV---RQPYRVKVIDFGSASHVSK   77 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~---~~~~~~~l~~~g~~~~~~~   77 (98)
                      +.+++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.|+++....   .....+++.|||.+.....
T Consensus        98 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~  176 (274)
T cd05076          98 VEHGPLDVCLRKEK-GRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALS  176 (274)
T ss_pred             CCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCcccccccc
Confidence            35788998886532 3588899999999999999999999999999999999995421   1123479999997754322


Q ss_pred             cccceecccccccCccccc
Q psy11820         78 AVCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        78 ~~~~~~~~~~~~~~pe~~~   96 (98)
                      .  ....++..|+|||.+.
T Consensus       177 ~--~~~~~~~~~~aPe~~~  193 (274)
T cd05076         177 R--EERVERIPWIAPECVP  193 (274)
T ss_pred             c--cccccCCcccCchhhc
Confidence            1  1224567799999764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.62  E-value=3e-15  Score=88.18  Aligned_cols=90  Identities=27%  Similarity=0.503  Sum_probs=70.6

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc---
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV---   79 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~---   79 (98)
                      +++|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|+++.|+++    +..+.++++|||.+.......   
T Consensus       102 ~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~----~~~~~~kl~dfg~~~~~~~~~~~~  176 (310)
T cd07865         102 EHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI----TKDGILKLADFGLARAFSLSKNSK  176 (310)
T ss_pred             CcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE----CCCCcEEECcCCCcccccCCcccC
Confidence            456777776542 358899999999999999999999999999999999999    666789999999886543211   


Q ss_pred             ---cceecccccccCcccccC
Q psy11820         80 ---CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ---~~~~~~~~~~~~pe~~~~   97 (98)
                         .....++..|+|||.+.+
T Consensus       177 ~~~~~~~~~~~~y~aPE~~~~  197 (310)
T cd07865         177 PNRYTNRVVTLWYRPPELLLG  197 (310)
T ss_pred             CCCccCcccCccccCcHHhcC
Confidence               122345678999998653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>KOG1094|consensus

Probab=99.62  E-value=1e-15  Score=95.59  Aligned_cols=92  Identities=22%  Similarity=0.309  Sum_probs=75.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      |.+|+|.+|+..+....+..+.-..++.||++|++||.+.+++|||+.++|+++    +....+|++|||.++.+-... 
T Consensus       617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv----~~e~~iKiadfgmsR~lysg~y  692 (807)
T KOG1094|consen  617 MENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV----DGEFTIKIADFGMSRNLYSGDY  692 (807)
T ss_pred             HhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee----cCcccEEecCcccccccccCCc
Confidence            678999999998865555555666799999999999999999999999999999    777899999999998653322 


Q ss_pred             ---cceecccccccCccccc
Q psy11820         80 ---CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ---~~~~~~~~~~~~pe~~~   96 (98)
                         ......+.+|||+|.+.
T Consensus       693 y~vqgr~vlpiRwmawEsil  712 (807)
T KOG1094|consen  693 YRVQGRAVLPIRWMAWESIL  712 (807)
T ss_pred             eeeecceeeeeeehhHHHHH
Confidence               23345567899999875

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.62  E-value=5e-15  Score=86.76  Aligned_cols=90  Identities=27%  Similarity=0.482  Sum_probs=69.9

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      +++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||++......  ..
T Consensus        86 ~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~----~~~~~~~l~Dfg~~~~~~~~~~~~  160 (291)
T cd07870          86 HTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLI----SYLGELKLADFGLARAKSIPSQTY  160 (291)
T ss_pred             cCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE----cCCCcEEEeccccccccCCCCCCC
Confidence            467777765443 357788888999999999999999999999999999999    56678999999988654221  12


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||.+.+
T Consensus       161 ~~~~~~~~y~aPE~~~~  177 (291)
T cd07870         161 SSEVVTLWYRPPDVLLG  177 (291)
T ss_pred             CCccccccccCCceeec
Confidence            23345778999998753

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.62  E-value=3.3e-15  Score=85.69  Aligned_cols=92  Identities=30%  Similarity=0.417  Sum_probs=74.4

Q ss_pred             cchhHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-
Q psy11820          2 LEQNLYDFLKQNK--FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-   78 (98)
                      .+++|.+++....  ...++...+..++.+++.|+.++|+.+++|+|+++.|+++    +....++++|||.+...... 
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~----~~~~~~~l~d~~~~~~~~~~~  157 (258)
T cd08215          82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFL----TSNGLVKLGDFGISKVLSSTV  157 (258)
T ss_pred             CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEE----cCCCcEEECCccceeecccCc
Confidence            4678999887642  3468999999999999999999999999999999999999    56678999999988765432 


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+++.|++||.+.+
T Consensus       158 ~~~~~~~~~~~y~~pe~~~~  177 (258)
T cd08215         158 DLAKTVVGTPYYLSPELCQN  177 (258)
T ss_pred             ceecceeeeecccChhHhcc
Confidence             2233456778999997643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG1026|consensus

Probab=99.62  E-value=1.5e-15  Score=97.20  Aligned_cols=92  Identities=25%  Similarity=0.349  Sum_probs=74.4

Q ss_pred             CcchhHHHHHhhCC--------C----CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEee
Q psy11820          1 MLEQNLYDFLKQNK--------F----SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVID   68 (98)
Q Consensus         1 ~~~~~L~~~~~~~~--------~----~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~   68 (98)
                      |..|||.+||..+.        .    ..|+..+.+.++.||+.|+.||-++.++|||+..+|+++    .....+||+|
T Consensus       571 m~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV----ge~l~VKIsD  646 (774)
T KOG1026|consen  571 MDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV----GENLVVKISD  646 (774)
T ss_pred             cccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee----ccceEEEecc
Confidence            56799999997542        1    127788899999999999999999999999999999999    7777999999


Q ss_pred             ecCceeeccccc----ceecccccccCccccc
Q psy11820         69 FGSASHVSKAVC----NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        69 ~g~~~~~~~~~~----~~~~~~~~~~~pe~~~   96 (98)
                      ||+++..-...+    ....-+.+||+||.++
T Consensus       647 fGLsRdiYssDYYk~~~~t~lPIRWMppEsIl  678 (774)
T KOG1026|consen  647 FGLSRDIYSSDYYKVRGNTLLPIRWMPPESIL  678 (774)
T ss_pred             cccchhhhhhhhhcccCCceeeeecCCHHHhh
Confidence            999987533221    2334467899999886

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.62  E-value=3.5e-15  Score=88.16  Aligned_cols=90  Identities=31%  Similarity=0.484  Sum_probs=71.3

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      +++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+......  ..
T Consensus        91 ~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~----~~~~~~kL~dfg~~~~~~~~~~~~  165 (309)
T cd07845          91 EQDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLL----TDKGCLKIADFGLARTYGLPAKPM  165 (309)
T ss_pred             CCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCCEEECccceeeecCCccCCC
Confidence            457778776543 368999999999999999999999999999999999999    66678999999988765432  11


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      .....++.|+|||++.+
T Consensus       166 ~~~~~~~~y~aPE~~~~  182 (309)
T cd07845         166 TPKVVTLWYRAPELLLG  182 (309)
T ss_pred             CcccccccccChhhhcC
Confidence            22234677999998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.62  E-value=4.8e-15  Score=86.52  Aligned_cols=89  Identities=31%  Similarity=0.523  Sum_probs=69.4

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---c
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---V   79 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---~   79 (98)
                      ++.+..+....  ..++...+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.++++|||.+......   .
T Consensus        84 ~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~----~~~~~~kl~d~g~~~~~~~~~~~~  157 (288)
T cd07833          84 RTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV----SESGVLKLCDFGFARALRARPASP  157 (288)
T ss_pred             CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----CCCCCEEEEeeecccccCCCcccc
Confidence            34444444332  258899999999999999999999999999999999999    66778999999988765332   2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++..|+|||++.+
T Consensus       158 ~~~~~~~~~~~~PE~~~~  175 (288)
T cd07833         158 LTDYVATRWYRAPELLVG  175 (288)
T ss_pred             ccCcccccCCcCCchhcC
Confidence            234556788999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.62  E-value=4.2e-15  Score=86.16  Aligned_cols=91  Identities=23%  Similarity=0.323  Sum_probs=71.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++.... ..++...+..++.+++.|+.++|+.+++|+|+++.|+++    .....+++.|||.+........ 
T Consensus        88 ~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili----~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd05066          88 ENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILV----NSNLVCKVSDFGLSRVLEDDPEA  162 (267)
T ss_pred             CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEE----CCCCeEEeCCCCcccccccccce
Confidence            5789999997653 357889999999999999999999999999999999999    6667899999998876533211 


Q ss_pred             -ce---ecccccccCcccccC
Q psy11820         81 -NT---YLQSRYYRAPEIILG   97 (98)
Q Consensus        81 -~~---~~~~~~~~~pe~~~~   97 (98)
                       ..   ...+..|++||.+.+
T Consensus       163 ~~~~~~~~~~~~y~~pe~~~~  183 (267)
T cd05066         163 AYTTRGGKIPIRWTAPEAIAY  183 (267)
T ss_pred             eeecCCCccceeecCHhHhcc
Confidence             11   112356999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.62  E-value=5.6e-15  Score=86.21  Aligned_cols=90  Identities=36%  Similarity=0.545  Sum_probs=71.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.++.....  .+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||++......  .
T Consensus        83 ~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~----~~~~~~~l~dfg~~~~~~~~~~~  156 (286)
T cd07846          83 DHTVLDDLEKYPN--GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILV----SQSGVVKLCDFGFARTLAAPGEV  156 (286)
T ss_pred             CccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE----CCCCcEEEEeeeeeeeccCCccc
Confidence            3566777665433  58899999999999999999999999999999999999    66678999999988754322  1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++..|++||++.+
T Consensus       157 ~~~~~~~~~y~aPE~~~~  174 (286)
T cd07846         157 YTDYVATRWYRAPELLVG  174 (286)
T ss_pred             cCcccceeeccCcHHhcc
Confidence            223456778999998653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.61  E-value=4.9e-15  Score=86.26  Aligned_cols=88  Identities=38%  Similarity=0.732  Sum_probs=70.8

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-ccc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCN   81 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~   81 (98)
                      +++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +. +.+++.|||.+...... ...
T Consensus        83 ~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l----~~-~~~kl~dfg~~~~~~~~~~~~  156 (282)
T cd07831          83 DMNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILI----KD-DILKLADFGSCRGIYSKPPYT  156 (282)
T ss_pred             CccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE----cC-CCeEEEecccccccccCCCcC
Confidence            467888876543 368999999999999999999999999999999999999    55 78999999988765322 122


Q ss_pred             eecccccccCccccc
Q psy11820         82 TYLQSRYYRAPEIIL   96 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~   96 (98)
                      ...+++.|+|||.+.
T Consensus       157 ~~~~~~~y~aPE~~~  171 (282)
T cd07831         157 EYISTRWYRAPECLL  171 (282)
T ss_pred             CCCCCcccCChhHhh
Confidence            345678899999753

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.61  E-value=5.9e-15  Score=84.82  Aligned_cols=91  Identities=30%  Similarity=0.425  Sum_probs=73.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++.... ..+++..+..++.+++.|+.|||+.+++|+|+++.|+++    ...+.+++.|||++.......  
T Consensus        81 ~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~----~~~~~~~l~dfg~~~~~~~~~~~  155 (256)
T cd06612          81 GAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILL----NEEGQAKLADFGVSGQLTDTMAK  155 (256)
T ss_pred             CCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE----CCCCcEEEcccccchhcccCccc
Confidence            4678999886543 368999999999999999999999999999999999999    666789999999887654321  


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++..|++||++.+
T Consensus       156 ~~~~~~~~~y~~PE~~~~  173 (256)
T cd06612         156 RNTVIGTPFWMAPEVIQE  173 (256)
T ss_pred             cccccCCccccCHHHHhc
Confidence            223346778999998754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.61  E-value=4.4e-15  Score=86.89  Aligned_cols=90  Identities=30%  Similarity=0.424  Sum_probs=72.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++....  .+++..+..++.|++.++.|+|+.+++|+|+++.|+++    ...+.+++.|||++.......  
T Consensus        88 ~~~~L~~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~~~~~~  161 (288)
T cd05583          88 NGGELFTHLYQRE--HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL----DSEGHVVLTDFGLSKEFLAEEEE  161 (288)
T ss_pred             CCCcHHHHHhhcC--CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE----CCCCCEEEEECcccccccccccc
Confidence            4689999887644  68889999999999999999999999999999999999    556689999999876543221  


Q ss_pred             -cceecccccccCcccccC
Q psy11820         80 -CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 -~~~~~~~~~~~~pe~~~~   97 (98)
                       .....++..|++||.+.+
T Consensus       162 ~~~~~~~~~~y~aPE~~~~  180 (288)
T cd05583         162 RAYSFCGTIEYMAPEVIRG  180 (288)
T ss_pred             ccccccCCccccCHHHhcC
Confidence             122346778999998653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.61  E-value=5.7e-15  Score=84.83  Aligned_cols=92  Identities=29%  Similarity=0.377  Sum_probs=72.9

Q ss_pred             cchhHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc
Q psy11820          2 LEQNLYDFLKQNK--FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~   79 (98)
                      .+++|.+++....  ...++++.+..++.+++.|+.|+|+.+++|+|+++.|+++    .....+++.|||.+.......
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~----~~~~~~kl~d~g~~~~~~~~~  157 (256)
T cd08530          82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILL----VANDLVKIGDLGISKVLKKNM  157 (256)
T ss_pred             CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE----ecCCcEEEeeccchhhhccCC
Confidence            4678988886521  2358889999999999999999999999999999999999    556689999999886654332


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|++||.+.+
T Consensus       158 ~~~~~~~~~~~~Pe~~~~  175 (256)
T cd08530         158 AKTQIGTPHYMAPEVWKG  175 (256)
T ss_pred             cccccCCccccCHHHHCC
Confidence            233456778999998753

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.61  E-value=5.2e-15  Score=86.65  Aligned_cols=92  Identities=30%  Similarity=0.459  Sum_probs=71.9

Q ss_pred             cchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc
Q psy11820          2 LEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~   79 (98)
                      .+++|.+++...  ....++...+..++.+++.|+.|+|+.+++|+|+++.|+++    .....+++.|||++.......
T Consensus        84 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~----~~~~~~~l~dfg~~~~~~~~~  159 (287)
T cd06621          84 EGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILL----TRKGQVKLCDFGVSGELVNSL  159 (287)
T ss_pred             CCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----ecCCeEEEeeccccccccccc
Confidence            467888876532  23357888999999999999999999999999999999999    556679999999876543332


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++..|++||.+.+
T Consensus       160 ~~~~~~~~~y~~pE~~~~  177 (287)
T cd06621         160 AGTFTGTSFYMAPERIQG  177 (287)
T ss_pred             cccccCCccccCHHHhcC
Confidence            233446678999997653

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.61  E-value=3.2e-15  Score=86.10  Aligned_cols=92  Identities=30%  Similarity=0.447  Sum_probs=74.5

Q ss_pred             cchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHH-----HcCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820          2 LEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLK-----QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus         2 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh-----~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .+++|.+++...  ....++++.+..++.+++.|+.|+|     +.+++|+|+++.|+++    ...+.+++.|||++..
T Consensus        84 ~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili----~~~~~~kl~d~g~~~~  159 (265)
T cd08217          84 EGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFL----DANNNVKLGDFGLAKI  159 (265)
T ss_pred             cCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEE----ecCCCEEEeccccccc
Confidence            467899988653  2346889999999999999999999     8999999999999999    6667899999998876


Q ss_pred             ecccc--cceecccccccCcccccC
Q psy11820         75 VSKAV--CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        75 ~~~~~--~~~~~~~~~~~~pe~~~~   97 (98)
                      .....  .....+++.|++||.+.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~pE~~~~  184 (265)
T cd08217         160 LGHDSSFAKTYVGTPYYMSPEQLNH  184 (265)
T ss_pred             ccCCcccccccccCCCccChhhhcC
Confidence            54322  233457788999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.61  E-value=5.7e-15  Score=86.06  Aligned_cols=89  Identities=29%  Similarity=0.465  Sum_probs=72.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++...   .+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+.......  
T Consensus        85 ~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~----~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06640          85 GGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLL----SEQGDVKLADFGVAGQLTDTQIK  157 (277)
T ss_pred             CCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEE----cCCCCEEEcccccceeccCCccc
Confidence            578999998753   48888899999999999999999999999999999999    556689999999887653321  


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++..|+|||.+.+
T Consensus       158 ~~~~~~~~~y~apE~~~~  175 (277)
T cd06640         158 RNTFVGTPFWMAPEVIQQ  175 (277)
T ss_pred             cccccCcccccCHhHhcc
Confidence            123346678999998753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.61  E-value=1e-14  Score=83.56  Aligned_cols=90  Identities=34%  Similarity=0.509  Sum_probs=73.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+......  .
T Consensus        76 ~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~----~~~~~~~l~d~~~~~~~~~~~~~  149 (250)
T cd05123          76 PGGELFSHLSKEG--RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILL----DADGHIKLTDFGLAKELSSEGSR  149 (250)
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEE----cCCCcEEEeecCcceecccCCCc
Confidence            4789999998664  68899999999999999999999999999999999999    55668999999988765332  2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++..|++||...+
T Consensus       150 ~~~~~~~~~~~~Pe~~~~  167 (250)
T cd05123         150 TNTFCGTPEYLAPEVLLG  167 (250)
T ss_pred             ccCCcCCccccChHHhCC
Confidence            233456778999998653

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=5e-15  Score=86.07  Aligned_cols=89  Identities=35%  Similarity=0.510  Sum_probs=74.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++...   .+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+......  .
T Consensus        82 ~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i----~~~~~~~l~d~g~~~~~~~~~~~  154 (274)
T cd06609          82 GGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILL----SEEGDVKLADFGVSGQLTSTMSK  154 (274)
T ss_pred             CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE----CCCCCEEEcccccceeecccccc
Confidence            467899998754   58899999999999999999999999999999999999    66778999999998766432  2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|++||.+.+
T Consensus       155 ~~~~~~~~~y~~PE~~~~  172 (274)
T cd06609         155 RNTFVGTPFWMAPEVIKQ  172 (274)
T ss_pred             cccccCCccccChhhhcc
Confidence            233456778999998754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.61  E-value=7.5e-15  Score=84.51  Aligned_cols=91  Identities=21%  Similarity=0.264  Sum_probs=71.3

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++.... ..++++.+..++.+++.++.++|+.+++|+|+++.|+++    .....+++.|||.+.........
T Consensus        82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i----~~~~~~~l~d~g~~~~~~~~~~~  156 (256)
T cd05112          82 EHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLV----GENQVVKVSDFGMTRFVLDDQYT  156 (256)
T ss_pred             CCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEE----cCCCeEEECCCcceeecccCccc
Confidence            5688999987543 357888999999999999999999999999999999999    56668999999988754322111


Q ss_pred             ---eecccccccCcccccC
Q psy11820         82 ---TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ---~~~~~~~~~~pe~~~~   97 (98)
                         ....+..|+|||.+.+
T Consensus       157 ~~~~~~~~~~~~aPe~~~~  175 (256)
T cd05112         157 SSTGTKFPVKWSSPEVFSF  175 (256)
T ss_pred             ccCCCccchhhcCHhHhcc
Confidence               1123457999998753

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.61  E-value=5.2e-15  Score=84.52  Aligned_cols=91  Identities=35%  Similarity=0.518  Sum_probs=74.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-C   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~   80 (98)
                      .+++|.+++.... ..+++..+..++.+++.++.++|+.+++|+|+++.|+++    ...+.++|.|||.+....... .
T Consensus        80 ~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i----~~~~~~~l~d~~~~~~~~~~~~~  154 (253)
T cd05122          80 SGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILL----TSDGEVKLIDFGLSAQLSDTKAR  154 (253)
T ss_pred             CCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEE----ccCCeEEEeeccccccccccccc
Confidence            4688999887653 368999999999999999999999999999999999999    556789999999887654322 2


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....++..|++||.+.+
T Consensus       155 ~~~~~~~~~~~PE~~~~  171 (253)
T cd05122         155 NTMVGTPYWMAPEVING  171 (253)
T ss_pred             cceecCCcccCHHHHcC
Confidence            34556778999998753

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.61  E-value=3.6e-15  Score=86.11  Aligned_cols=92  Identities=29%  Similarity=0.424  Sum_probs=73.5

Q ss_pred             cchhHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          2 LEQNLYDFLKQNKF-SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      .+++|.+++..... ..+++..+..++.|++.|+.++|+.+++|+|+++.|+++    +..+.+++.|||++....... 
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~----~~~~~~~l~df~~~~~~~~~~~  157 (267)
T cd06610          82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILL----GEDGSVKIADFGVSASLADGGD  157 (267)
T ss_pred             CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE----cCCCCEEEcccchHHHhccCcc
Confidence            57899999876432 358899999999999999999999999999999999999    566789999999876543211 


Q ss_pred             -----cceecccccccCcccccC
Q psy11820         80 -----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 -----~~~~~~~~~~~~pe~~~~   97 (98)
                           .....++..|++||++..
T Consensus       158 ~~~~~~~~~~~~~~y~~Pe~~~~  180 (267)
T cd06610         158 RTRKVRKTFVGTPCWMAPEVMEQ  180 (267)
T ss_pred             ccccccccccCChhhcChHHHcc
Confidence                 123356778999998653

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.61  E-value=5.9e-15  Score=85.98  Aligned_cols=94  Identities=24%  Similarity=0.300  Sum_probs=70.2

Q ss_pred             cchhHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec
Q psy11820          2 LEQNLYDFLKQNKF-----SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS   76 (98)
Q Consensus         2 ~~~~L~~~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~   76 (98)
                      .+++|.+++.....     ..+++..+..++.+++.|+.|+|+.+++|+|+++.||++.... ....++++|||++....
T Consensus        92 ~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~-~~~~~kl~dfg~~~~~~  170 (277)
T cd05036          92 AGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKG-PGRVAKIADFGMARDIY  170 (277)
T ss_pred             CCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccC-CCcceEeccCccccccC
Confidence            47899999876532     2478889999999999999999999999999999999994321 13368999999887542


Q ss_pred             cccc----ceecccccccCccccc
Q psy11820         77 KAVC----NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        77 ~~~~----~~~~~~~~~~~pe~~~   96 (98)
                      ....    .....+..|+|||++.
T Consensus       171 ~~~~~~~~~~~~~~~~y~aPE~~~  194 (277)
T cd05036         171 RASYYRKGGRAMLPIKWMPPEAFL  194 (277)
T ss_pred             CccceecCCCCCccHhhCCHHHHh
Confidence            2111    1112245699999875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.61  E-value=6e-15  Score=84.76  Aligned_cols=91  Identities=23%  Similarity=0.308  Sum_probs=71.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++.......+++..+..++.|++.|+.++|+.+++|+|+++.|+++    +..+.+++.|||.+........ 
T Consensus        84 ~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~----~~~~~~~l~dfg~~~~~~~~~~~  159 (258)
T smart00219       84 EGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV----GENLVVKISDFGLSRDLYDDDYY  159 (258)
T ss_pred             CCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEE----ccCCeEEEcccCCceeccccccc
Confidence            46899999876542238999999999999999999999999999999999999    6666899999998876543211 


Q ss_pred             c--eecccccccCccccc
Q psy11820         81 N--TYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ~--~~~~~~~~~~pe~~~   96 (98)
                      .  ...+++.|++||.+.
T Consensus       160 ~~~~~~~~~~y~~Pe~~~  177 (258)
T smart00219      160 KKKGGKLPIRWMAPESLK  177 (258)
T ss_pred             ccccCCCcccccChHHhc
Confidence            1  112456799999763

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.61  E-value=3.9e-15  Score=89.28  Aligned_cols=86  Identities=34%  Similarity=0.613  Sum_probs=69.8

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccce
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT   82 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~   82 (98)
                      +++|.+++...   .+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||++...... ...
T Consensus       103 ~~~l~~~~~~~---~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill----~~~~~~kl~dfg~~~~~~~~-~~~  174 (343)
T cd07880         103 GTDLGKLMKHE---KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAV----NEDCELKILDFGLARQTDSE-MTG  174 (343)
T ss_pred             CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEeecccccccccC-ccc
Confidence            56777777632   58899999999999999999999999999999999999    56678999999988754322 123


Q ss_pred             ecccccccCccccc
Q psy11820         83 YLQSRYYRAPEIIL   96 (98)
Q Consensus        83 ~~~~~~~~~pe~~~   96 (98)
                      ..+++.|++||.+.
T Consensus       175 ~~~~~~y~aPE~~~  188 (343)
T cd07880         175 YVVTRWYRAPEVIL  188 (343)
T ss_pred             cccCCcccCHHHHh
Confidence            34677899999865

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.60  E-value=3.8e-15  Score=89.29  Aligned_cols=87  Identities=36%  Similarity=0.641  Sum_probs=71.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++...   .+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.++++|||++...... ..
T Consensus       102 ~~~~L~~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill----~~~~~~kL~dfg~~~~~~~~-~~  173 (343)
T cd07851         102 MGADLNNIVKCQ---KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV----NEDCELKILDFGLARHTDDE-MT  173 (343)
T ss_pred             CCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----CCCCCEEEcccccccccccc-cc
Confidence            356888888652   58999999999999999999999999999999999999    66678999999988765332 23


Q ss_pred             eecccccccCccccc
Q psy11820         82 TYLQSRYYRAPEIIL   96 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~   96 (98)
                      ...++..|+|||.+.
T Consensus       174 ~~~~~~~y~aPE~~~  188 (343)
T cd07851         174 GYVATRWYRAPEIML  188 (343)
T ss_pred             CCcccccccCHHHHh
Confidence            345677899999864

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.60  E-value=7.8e-15  Score=86.05  Aligned_cols=92  Identities=26%  Similarity=0.435  Sum_probs=69.7

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      +++|.+++.......++...+..++.+++.|+.|+|+++++|+|+++.|+++..   ....++++|||++......  ..
T Consensus        84 ~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~---~~~~~kl~dfg~~~~~~~~~~~~  160 (294)
T PLN00009         84 DLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR---RTNALKLADFGLARAFGIPVRTF  160 (294)
T ss_pred             cccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC---CCCEEEEcccccccccCCCcccc
Confidence            467888876554334678888899999999999999999999999999999932   2346899999988654321  11


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|++||.+.+
T Consensus       161 ~~~~~~~~y~~PE~~~~  177 (294)
T PLN00009        161 THEVVTLWYRAPEILLG  177 (294)
T ss_pred             ccCceeecccCHHHHhC
Confidence            23345678999998643

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.60  E-value=6.4e-15  Score=86.33  Aligned_cols=77  Identities=19%  Similarity=0.287  Sum_probs=60.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc----cceecccccccCc
Q psy11820         17 PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV----CNTYLQSRYYRAP   92 (98)
Q Consensus        17 ~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~----~~~~~~~~~~~~p   92 (98)
                      .++...+..++.+++.|+.|+|+.+++|+|+++.|+++    .....+++.|||++.......    .....++..|++|
T Consensus       123 ~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill----~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~ap  198 (290)
T cd05045         123 ALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV----AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAI  198 (290)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE----cCCCcEEeccccccccccCccchhcccCCCCCccccCH
Confidence            46788889999999999999999999999999999999    556689999999886542211    1122345579999


Q ss_pred             ccccC
Q psy11820         93 EIILG   97 (98)
Q Consensus        93 e~~~~   97 (98)
                      |.+.+
T Consensus       199 E~~~~  203 (290)
T cd05045         199 ESLFD  203 (290)
T ss_pred             HHHcc
Confidence            97643

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.60  E-value=4.2e-15  Score=87.79  Aligned_cols=95  Identities=28%  Similarity=0.512  Sum_probs=70.6

Q ss_pred             chhHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc
Q psy11820          3 EQNLYDFLKQNK---FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV   79 (98)
Q Consensus         3 ~~~L~~~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~   79 (98)
                      +++|.+++....   ...+++..+..++.|++.|+.|+|+.+++|+|+++.|+++.......+.++++|||++.......
T Consensus        87 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~  166 (316)
T cd07842          87 EHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPL  166 (316)
T ss_pred             CcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCc
Confidence            456666664321   22578899999999999999999999999999999999994322237789999999887543221


Q ss_pred             -----cceecccccccCcccccC
Q psy11820         80 -----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 -----~~~~~~~~~~~~pe~~~~   97 (98)
                           .....++..|+|||++.+
T Consensus       167 ~~~~~~~~~~~~~~y~aPE~~~~  189 (316)
T cd07842         167 KPLADLDPVVVTIWYRAPELLLG  189 (316)
T ss_pred             ccccccCCccccccccCHHHHhC
Confidence                 122356778999998654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.60  E-value=7.5e-15  Score=84.18  Aligned_cols=90  Identities=32%  Similarity=0.470  Sum_probs=74.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++....  .+++..+..++.+++.++.|+|+.+++|+|+++.|+++    ...+.+++.|||.+.......  
T Consensus        84 ~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i----~~~~~~~l~d~~~~~~~~~~~~~  157 (260)
T cd06606          84 SGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILV----DSDGVVKLADFGCAKRLGDIETG  157 (260)
T ss_pred             CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE----cCCCCEEEcccccEEeccccccc
Confidence            4789999998765  78999999999999999999999999999999999999    556789999999887654332  


Q ss_pred             --cceecccccccCcccccC
Q psy11820         80 --CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 --~~~~~~~~~~~~pe~~~~   97 (98)
                        .....++..|++||...+
T Consensus       158 ~~~~~~~~~~~y~~pE~~~~  177 (260)
T cd06606         158 EGTGSVRGTPYWMAPEVIRG  177 (260)
T ss_pred             ccccCCCCCccccCHhhhcC
Confidence              233456778999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.60  E-value=1e-14  Score=89.21  Aligned_cols=76  Identities=24%  Similarity=0.298  Sum_probs=60.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc----ccceecccccccCcc
Q psy11820         18 LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPE   93 (98)
Q Consensus        18 l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~----~~~~~~~~~~~~~pe   93 (98)
                      +++..+..++.+++.|+.|+|+.+++|+|+++.|+++    .....++++|||++......    ......+++.|++||
T Consensus       236 l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl----~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE  311 (401)
T cd05107         236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLI----CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPE  311 (401)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEE----eCCCEEEEEecCcceecccccccccCCCcCCCCceeChH
Confidence            5667788899999999999999999999999999999    55668999999998754221    112234567799999


Q ss_pred             cccC
Q psy11820         94 IILG   97 (98)
Q Consensus        94 ~~~~   97 (98)
                      .+.+
T Consensus       312 ~~~~  315 (401)
T cd05107         312 SIFN  315 (401)
T ss_pred             HhcC
Confidence            8753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.60  E-value=9.3e-15  Score=83.87  Aligned_cols=91  Identities=20%  Similarity=0.278  Sum_probs=71.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++.... ..+++..+..++.+++.++.|+|+.+++|+|+++.|+++    +..+.+++.|||++........ 
T Consensus        75 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili----~~~~~~~l~d~g~~~~~~~~~~~  149 (250)
T cd05085          75 PGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLV----GENNVLKISDFGMSRQEDDGIYS  149 (250)
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEE----cCCCeEEECCCccceeccccccc
Confidence            5789999887543 357889999999999999999999999999999999999    5666899999998865432211 


Q ss_pred             --ceecccccccCcccccC
Q psy11820         81 --NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 --~~~~~~~~~~~pe~~~~   97 (98)
                        .....+..|+|||++.+
T Consensus       150 ~~~~~~~~~~y~aPE~~~~  168 (250)
T cd05085         150 SSGLKQIPIKWTAPEALNY  168 (250)
T ss_pred             cCCCCCCcccccCHHHhcc
Confidence              11223456999998653

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.60  E-value=9.2e-15  Score=83.94  Aligned_cols=91  Identities=21%  Similarity=0.279  Sum_probs=70.3

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++.... ..++...+..++.+++.++.|+|+++++|+|+++.|+++    +..+.+++.|||.+........ 
T Consensus        75 ~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili----~~~~~~~l~d~g~~~~~~~~~~~  149 (251)
T cd05041          75 PGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV----GENNVLKISDFGMSREEEGGIYT  149 (251)
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEE----cCCCcEEEeeccccccccCCcce
Confidence            5788999986543 257888899999999999999999999999999999999    6667899999998875432111 


Q ss_pred             ---ceecccccccCcccccC
Q psy11820         81 ---NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ---~~~~~~~~~~~pe~~~~   97 (98)
                         .....+..|+|||.+.+
T Consensus       150 ~~~~~~~~~~~y~~PE~~~~  169 (251)
T cd05041         150 VSDGLKQIPIKWTAPEALNY  169 (251)
T ss_pred             eccccCcceeccCChHhhcc
Confidence               11122345999998653

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.60  E-value=9.3e-15  Score=84.75  Aligned_cols=91  Identities=24%  Similarity=0.371  Sum_probs=70.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++.... +.++...+..++.|++.|+.|+|+.+++|+|+++.|+++    +....+++.|||++........ 
T Consensus        88 ~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili----~~~~~~kl~dfg~~~~~~~~~~~  162 (269)
T cd05065          88 ENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILV----NSNLVCKVSDFGLSRFLEDDTSD  162 (269)
T ss_pred             CCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEE----cCCCcEEECCCccccccccCccc
Confidence            4679999987653 358899999999999999999999999999999999999    6667899999998765432110 


Q ss_pred             ---ceec---ccccccCcccccC
Q psy11820         81 ---NTYL---QSRYYRAPEIILG   97 (98)
Q Consensus        81 ---~~~~---~~~~~~~pe~~~~   97 (98)
                         ....   .+..|++||.+.+
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~  185 (269)
T cd05065         163 PTYTSSLGGKIPIRWTAPEAIAY  185 (269)
T ss_pred             cccccccCCCcceeecCHhHhcc
Confidence               0111   1346999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.59  E-value=7.2e-15  Score=85.12  Aligned_cols=96  Identities=27%  Similarity=0.322  Sum_probs=70.0

Q ss_pred             cchhHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCC-CCCccEEEeeecCceee
Q psy11820          2 LEQNLYDFLKQNK-----FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV-RQPYRVKVIDFGSASHV   75 (98)
Q Consensus         2 ~~~~L~~~~~~~~-----~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~-~~~~~~~l~~~g~~~~~   75 (98)
                      .+++|.+++....     ...+++..+..++.+++.|+.|+|+.+++|+|+++.|+++.... +....+++.|||++...
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~  161 (269)
T cd05044          82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDI  161 (269)
T ss_pred             CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccccc
Confidence            5789999987532     22477888999999999999999999999999999999994321 01227899999988654


Q ss_pred             cccc----cceecccccccCcccccC
Q psy11820         76 SKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        76 ~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      ....    ......+..|+|||.+.+
T Consensus       162 ~~~~~~~~~~~~~~~~~y~aPE~~~~  187 (269)
T cd05044         162 YKSDYYRKEGEGLLPVRWMAPESLLD  187 (269)
T ss_pred             ccccccccCcccCCCccccCHHHHcc
Confidence            3211    112233567999998753

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.59  E-value=7.2e-15  Score=85.36  Aligned_cols=89  Identities=30%  Similarity=0.518  Sum_probs=72.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++....  .+++..+..++.+++.|+.+||+.+++|+|+++.|+++    ...+.+++.|||++.......  
T Consensus        85 ~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i----~~~~~~~l~df~~~~~~~~~~~~  158 (280)
T cd05581          85 PNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILL----DKDMHIKITDFGTAKVLDPNSSP  158 (280)
T ss_pred             CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE----CCCCCEEecCCccccccCCcccc
Confidence            4789999998754  69999999999999999999999999999999999999    566789999999877543211  


Q ss_pred             --------------------cceecccccccCccccc
Q psy11820         80 --------------------CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 --------------------~~~~~~~~~~~~pe~~~   96 (98)
                                          .....++..|++||+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~  195 (280)
T cd05581         159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLN  195 (280)
T ss_pred             ccCCCCCccccccccccccccccccCCccccCHHHhC
Confidence                                11234567899999764

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.59  E-value=7.7e-15  Score=86.30  Aligned_cols=88  Identities=33%  Similarity=0.479  Sum_probs=71.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++...   .+++..+..++.+++.++.|+|+.+++|+|+++.|+++    +..+.+++.|||.+......  .
T Consensus       100 ~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv----~~~~~~~l~dfg~~~~~~~~~~~  172 (292)
T cd06657         100 EGGALTDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILL----THDGRVKLSDFGFCAQVSKEVPR  172 (292)
T ss_pred             CCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCCEEEcccccceeccccccc
Confidence            467888887543   47889999999999999999999999999999999999    56668999999987654322  1


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....+++.|++||.+.
T Consensus       173 ~~~~~~~~~y~~pE~~~  189 (292)
T cd06657         173 RKSLVGTPYWMAPELIS  189 (292)
T ss_pred             ccccccCccccCHHHhc
Confidence            22345678899999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.59  E-value=1.7e-14  Score=83.93  Aligned_cols=90  Identities=32%  Similarity=0.573  Sum_probs=72.1

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--c
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--C   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--~   80 (98)
                      +++|.+++.... ..+++..+..++.+++.|+.++|+.+++|+|+++.|+++    ...+.++++|||.+.......  .
T Consensus        81 ~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~----~~~~~~~l~d~g~~~~~~~~~~~~  155 (282)
T cd07829          81 DMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILI----NRDGVLKLADFGLARAFGIPLRTY  155 (282)
T ss_pred             CcCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEE----cCCCCEEEecCCcccccCCCcccc
Confidence            468899887652 358999999999999999999999999999999999999    667789999999887653321  1


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      .....+..|+|||.+.+
T Consensus       156 ~~~~~~~~~~aPE~~~~  172 (282)
T cd07829         156 THEVVTLWYRAPEILLG  172 (282)
T ss_pred             CccccCcCcCChHHhcC
Confidence            22334567999998643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG1164|consensus

Probab=99.59  E-value=1.1e-14  Score=86.86  Aligned_cols=97  Identities=28%  Similarity=0.371  Sum_probs=75.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCC-CCCccEEEeeecCce--eec-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV-RQPYRVKVIDFGSAS--HVS-   76 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~-~~~~~~~l~~~g~~~--~~~-   76 (98)
                      +.|.+|.++......+.++..++..++.|++.+|.++|+.|++|||++|.|+.++... .....+.+.|||+++  ... 
T Consensus       102 l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~  181 (322)
T KOG1164|consen  102 LLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVG  181 (322)
T ss_pred             ccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccC
Confidence            4678999988766666899999999999999999999999999999999999996543 112468999999998  321 


Q ss_pred             cc------c---cceecccccccCcccccC
Q psy11820         77 KA------V---CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        77 ~~------~---~~~~~~~~~~~~pe~~~~   97 (98)
                      ..      .   ...+.||..|.++.+..+
T Consensus       182 ~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~  211 (322)
T KOG1164|consen  182 DSGGNLRPPRPQKGLFRGTLRYASINVHLG  211 (322)
T ss_pred             CCCcccccCCCCccCCCCccccccHHHhCC
Confidence            11      0   123458888998876654

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.59  E-value=9.9e-15  Score=84.69  Aligned_cols=91  Identities=23%  Similarity=0.270  Sum_probs=68.7

Q ss_pred             cchhHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc
Q psy11820          2 LEQNLYDFLKQNK----FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK   77 (98)
Q Consensus         2 ~~~~L~~~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~   77 (98)
                      .+++|.+++....    ...++...+..++.+++.|++|+|+++++|+|+++.|+++    .....+++.|||++.....
T Consensus        90 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili----~~~~~~kl~dfg~~~~~~~  165 (273)
T cd05074          90 KHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCML----NENMTVCVADFGLSKKIYS  165 (273)
T ss_pred             CCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEE----cCCCCEEECcccccccccC
Confidence            3578888764321    1247888899999999999999999999999999999999    5667899999998875432


Q ss_pred             cc----cceecccccccCccccc
Q psy11820         78 AV----CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        78 ~~----~~~~~~~~~~~~pe~~~   96 (98)
                      ..    .....+++.|++||.+.
T Consensus       166 ~~~~~~~~~~~~~~~~~~pe~~~  188 (273)
T cd05074         166 GDYYRQGCASKLPVKWLALESLA  188 (273)
T ss_pred             CcceecCCCccCchhhcCHhHHh
Confidence            11    11223345689999764

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.58  E-value=1.6e-14  Score=90.30  Aligned_cols=75  Identities=33%  Similarity=0.596  Sum_probs=59.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc---ceecccccccCccc
Q psy11820         18 LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC---NTYLQSRYYRAPEI   94 (98)
Q Consensus        18 l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~---~~~~~~~~~~~pe~   94 (98)
                      +++..+..++.+++.++.|+|+.+++|+|+++.|+++    .....+++.|||++........   .....++.|++||.
T Consensus       306 ~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl----~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~  381 (507)
T PLN03224        306 RDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLV----TVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEE  381 (507)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEE----CCCCcEEEEeCcCccccccCCccCccccCCCcceeChhh
Confidence            3456788889999999999999999999999999999    5566899999999865432211   11234678999998


Q ss_pred             cc
Q psy11820         95 IL   96 (98)
Q Consensus        95 ~~   96 (98)
                      +.
T Consensus       382 l~  383 (507)
T PLN03224        382 LV  383 (507)
T ss_pred             hc
Confidence            74

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.58  E-value=1.1e-14  Score=87.05  Aligned_cols=87  Identities=43%  Similarity=0.622  Sum_probs=69.9

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc----
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----   78 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~----   78 (98)
                      +++|.+++...   .+.+.....++.+++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||.+......    
T Consensus        92 ~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill----~~~~~~kl~d~g~~~~~~~~~~~~  164 (337)
T cd07852          92 ETDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILL----NSDCRVKLADFGLARSLSELEENP  164 (337)
T ss_pred             ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----cCCCcEEEeeccchhccccccccc
Confidence            45788877653   57788888999999999999999999999999999999    66778999999988754321    


Q ss_pred             ---ccceecccccccCccccc
Q psy11820         79 ---VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ---~~~~~~~~~~~~~pe~~~   96 (98)
                         ......+++.|++||.+.
T Consensus       165 ~~~~~~~~~~~~~y~aPE~~~  185 (337)
T cd07852         165 ENPVLTDYVATRWYRAPEILL  185 (337)
T ss_pred             cCcchhcccccccccCceeee
Confidence               112345778899999764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG4257|consensus

Probab=99.58  E-value=4.6e-15  Score=93.61  Aligned_cols=89  Identities=30%  Similarity=0.398  Sum_probs=73.1

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc-
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-   81 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~-   81 (98)
                      -|.|..|+..++. .++..++..|+.|+..++.|||+.+.+||||..+|+++    .....+|++|||+++.+..+... 
T Consensus       474 ~GELr~yLq~nk~-sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLV----sSp~CVKLaDFGLSR~~ed~~yYk  548 (974)
T KOG4257|consen  474 LGELREYLQQNKD-SLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILV----SSPQCVKLADFGLSRYLEDDAYYK  548 (974)
T ss_pred             chhHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheee----cCcceeeecccchhhhccccchhh
Confidence            4789999987764 58888999999999999999999999999999999999    55558999999999987654322 


Q ss_pred             ee--cccccccCccccc
Q psy11820         82 TY--LQSRYYRAPEIIL   96 (98)
Q Consensus        82 ~~--~~~~~~~~pe~~~   96 (98)
                      ..  ..+..|||||.+-
T Consensus       549 aS~~kLPIKWmaPESIN  565 (974)
T KOG4257|consen  549 ASRGKLPIKWMAPESIN  565 (974)
T ss_pred             ccccccceeecCccccc
Confidence            11  2344699999763

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.58  E-value=1.2e-14  Score=85.10  Aligned_cols=92  Identities=24%  Similarity=0.299  Sum_probs=69.7

Q ss_pred             cchhHHHHHhhCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCC
Q psy11820          2 LEQNLYDFLKQNK--------------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP   61 (98)
Q Consensus         2 ~~~~L~~~~~~~~--------------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~   61 (98)
                      .+++|.+++....                    ...+++..+..++.+++.|+.|+|+++++|+|+++.|+++    ...
T Consensus        91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~----~~~  166 (288)
T cd05050          91 AYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLV----GEN  166 (288)
T ss_pred             CCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEe----cCC
Confidence            4678988886432                    1236778889999999999999999999999999999999    566


Q ss_pred             ccEEEeeecCceeecccc----cceecccccccCcccccC
Q psy11820         62 YRVKVIDFGSASHVSKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        62 ~~~~l~~~g~~~~~~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      +.++++|||.+.......    ......+..|+|||.+.+
T Consensus       167 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  206 (288)
T cd05050         167 MVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY  206 (288)
T ss_pred             CceEECccccceecccCccccccCCCccChhhcCHHHHhc
Confidence            789999999887543211    112233456999997653

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.58  E-value=1.4e-14  Score=83.98  Aligned_cols=91  Identities=26%  Similarity=0.376  Sum_probs=70.0

Q ss_pred             cchhHHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-
Q psy11820          2 LEQNLYDFLKQNKFSPL--PLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l--~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-   78 (98)
                      .+++|.+++.... ..+  +...+..++.|++.|+.|+|+.+++|+|+++.||++..   ....+++.|||.+...... 
T Consensus        88 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~---~~~~~~l~dfg~~~~~~~~~  163 (268)
T cd06624          88 PGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT---YSGVVKISDFGTSKRLAGIN  163 (268)
T ss_pred             CCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC---CCCeEEEecchhheecccCC
Confidence            5789999987542 234  77888889999999999999999999999999999932   2457899999987654321 


Q ss_pred             -ccceecccccccCccccc
Q psy11820         79 -VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~   96 (98)
                       ......+++.|+|||.+.
T Consensus       164 ~~~~~~~~~~~~~aPE~~~  182 (268)
T cd06624         164 PCTETFTGTLQYMAPEVID  182 (268)
T ss_pred             CccccCCCCccccChhhhc
Confidence             122334678899999864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.58  E-value=1.3e-14  Score=84.51  Aligned_cols=90  Identities=28%  Similarity=0.481  Sum_probs=71.3

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc---
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV---   79 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~---   79 (98)
                      .++|.+++.... ..+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.++++|||.+.......   
T Consensus        83 ~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~----~~~~~~~l~d~g~~~~~~~~~~~~  157 (287)
T cd07840          83 DHDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI----NNDGVLKLADFGLARPYTKRNSAD  157 (287)
T ss_pred             cccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE----cCCCCEEEccccceeeccCCCccc
Confidence            357788776542 368899999999999999999999999999999999999    667789999999887654322   


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++..|+|||.+.+
T Consensus       158 ~~~~~~~~~y~~PE~~~~  175 (287)
T cd07840         158 YTNRVITLWYRPPELLLG  175 (287)
T ss_pred             ccccccccccCCceeeEc
Confidence            122345677999997653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.58  E-value=1.2e-14  Score=86.57  Aligned_cols=92  Identities=18%  Similarity=0.167  Sum_probs=68.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc---c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK---A   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---~   78 (98)
                      .+++|.+++.......+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.+|+.......   .
T Consensus        82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill----~~~~~~~~~~~~~~~~~~~~~~~  157 (328)
T cd08226          82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILI----SGDGLVSLSGLSHLYSLVRNGQK  157 (328)
T ss_pred             cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----eCCCcEEEechHHHhhhhccCcc
Confidence            45789998887544468899999999999999999999999999999999999    5556788888864322111   0


Q ss_pred             c------cceecccccccCcccccC
Q psy11820         79 V------CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~------~~~~~~~~~~~~pe~~~~   97 (98)
                      .      .....++..|++||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~  182 (328)
T cd08226         158 AKVVYDFPQFSTSVLPWLSPELLRQ  182 (328)
T ss_pred             ccccccccccccCccCccChhhhcC
Confidence            0      011123456999998754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.58  E-value=1.6e-14  Score=84.10  Aligned_cols=90  Identities=37%  Similarity=0.684  Sum_probs=71.9

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--c
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--C   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--~   80 (98)
                      .++|.+++.... ..+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+.......  .
T Consensus        81 ~~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili----~~~~~~~l~df~~~~~~~~~~~~~  155 (283)
T cd05118          81 DTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI----NTEGVLKLADFGLARSFGSPVRPY  155 (283)
T ss_pred             CCCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEE----CCCCcEEEeeeeeeEecCCCcccc
Confidence            457778776543 368899999999999999999999999999999999999    666789999999887654321  2


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....++..|++||.+.+
T Consensus       156 ~~~~~~~~~~~PE~~~~  172 (283)
T cd05118         156 THYVVTRWYRAPELLLG  172 (283)
T ss_pred             cCccCcccccCcHHHhc
Confidence            23446678999998753

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.57  E-value=1.6e-14  Score=83.07  Aligned_cols=91  Identities=23%  Similarity=0.346  Sum_probs=72.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCC-ccEEEeeecCceeecccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP-YRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~-~~~~l~~~g~~~~~~~~~-   79 (98)
                      .+++|.+++.......+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    +.. ..+++.|||.+....... 
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~----~~~~~~~~l~d~~~~~~~~~~~~  157 (257)
T cd08225          82 DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFL----SKNGMVAKLGDFGIARQLNDSME  157 (257)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE----cCCCCeEEecccccchhccCCcc
Confidence            47899999876554467899999999999999999999999999999999999    333 356999999876553321 


Q ss_pred             -cceecccccccCccccc
Q psy11820         80 -CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 -~~~~~~~~~~~~pe~~~   96 (98)
                       .....+++.|+|||.+.
T Consensus       158 ~~~~~~~~~~~~ape~~~  175 (257)
T cd08225         158 LAYTCVGTPYYLSPEICQ  175 (257)
T ss_pred             cccccCCCccccCHHHHc
Confidence             12335677899999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.57  E-value=3.3e-14  Score=84.00  Aligned_cols=87  Identities=43%  Similarity=0.585  Sum_probs=69.7

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccce
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT   82 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~   82 (98)
                      .++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||++......  ..
T Consensus        98 ~g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~----~~~~~~kL~dfg~~~~~~~~--~~  170 (307)
T cd06607          98 LGSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL----TEPGTVKLADFGSASLVSPA--NS  170 (307)
T ss_pred             CCCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE----CCCCCEEEeecCcceecCCC--CC
Confidence            356777665433 258899999999999999999999999999999999999    66678999999988654322  23


Q ss_pred             ecccccccCccccc
Q psy11820         83 YLQSRYYRAPEIIL   96 (98)
Q Consensus        83 ~~~~~~~~~pe~~~   96 (98)
                      ..+++.|+|||++.
T Consensus       171 ~~~~~~y~aPE~~~  184 (307)
T cd06607         171 FVGTPYWMAPEVIL  184 (307)
T ss_pred             ccCCccccCceeee
Confidence            45677899999863

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.57  E-value=1.8e-14  Score=83.93  Aligned_cols=90  Identities=24%  Similarity=0.332  Sum_probs=70.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++.... ..+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    +..+.++++|||.+.......  
T Consensus        91 ~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~~~~~~  165 (284)
T cd05038          91 PSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV----ESEDLVKISDFGLAKVLPEDKDY  165 (284)
T ss_pred             CCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE----cCCCCEEEcccccccccccCCcc
Confidence            4689999997653 248899999999999999999999999999999999999    566789999999887654211  


Q ss_pred             ---cceecccccccCccccc
Q psy11820         80 ---CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ---~~~~~~~~~~~~pe~~~   96 (98)
                         .....++..|++||.+.
T Consensus       166 ~~~~~~~~~~~~~~~Pe~~~  185 (284)
T cd05038         166 YYVKEPGESPIFWYAPECLR  185 (284)
T ss_pred             eeccCCCCCcccccCcHHHc
Confidence               01122344589999764

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.57  E-value=1.5e-14  Score=84.57  Aligned_cols=91  Identities=32%  Similarity=0.435  Sum_probs=72.6

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++.... ..++...+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+......  .
T Consensus        98 ~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i----~~~~~~~l~d~~~~~~~~~~~~~  172 (286)
T cd06614          98 DGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL----SKDGSVKLADFGFAAQLTKEKSK  172 (286)
T ss_pred             CCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEE----cCCCCEEECccchhhhhccchhh
Confidence            4689999998653 358899999999999999999999999999999999999    66678999999987644321  1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++..|++||.+.+
T Consensus       173 ~~~~~~~~~y~~PE~~~~  190 (286)
T cd06614         173 RNSVVGTPYWMAPEVIKR  190 (286)
T ss_pred             hccccCCcccCCHhHhcC
Confidence            122345678999998653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG1165|consensus

Probab=99.57  E-value=1.9e-14  Score=85.19  Aligned_cols=96  Identities=23%  Similarity=0.355  Sum_probs=78.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCc-cEEEeeecCceeeccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY-RVKVIDFGSASHVSKA-   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~-~~~l~~~g~~~~~~~~-   78 (98)
                      ++|.+|+|++.-++ ..|+.+++.-++.|++.-++++|++.+|.|||+|+|++|+.++.... .+.+.|||++...... 
T Consensus       105 LLGPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~  183 (449)
T KOG1165|consen  105 LLGPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK  183 (449)
T ss_pred             hhCcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence            36788888887664 47999999999999999999999999999999999999988766544 5799999999875432 


Q ss_pred             --------ccceecccccccCcccccC
Q psy11820         79 --------VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --------~~~~~~~~~~~~~pe~~~~   97 (98)
                              ...+..||.+||+....+|
T Consensus       184 TkqHIPYrE~KSLsGTARYMSINTHlG  210 (449)
T KOG1165|consen  184 TKQHIPYREHKSLSGTARYMSINTHLG  210 (449)
T ss_pred             ccccCccccccccccceeeeEeecccc
Confidence                    2345678899998776655

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.57  E-value=1.8e-14  Score=84.00  Aligned_cols=91  Identities=23%  Similarity=0.473  Sum_probs=71.2

Q ss_pred             chhHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          3 EQNLYDFLKQNK-FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         3 ~~~L~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .++|.+++.... ...+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+......  .
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~----~~~~~~~l~d~g~~~~~~~~~~~  156 (284)
T cd07836          81 DKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLI----NKRGELKLADFGLARAFGIPVNT  156 (284)
T ss_pred             CccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE----CCCCcEEEeecchhhhhcCCccc
Confidence            357888876543 2358899999999999999999999999999999999999    66678999999988654321  1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|++||.+.+
T Consensus       157 ~~~~~~~~~y~~PE~~~~  174 (284)
T cd07836         157 FSNEVVTLWYRAPDVLLG  174 (284)
T ss_pred             cccccccccccChHHhcC
Confidence            122345678999998753

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.57  E-value=1.8e-14  Score=84.71  Aligned_cols=89  Identities=25%  Similarity=0.456  Sum_probs=69.2

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc---
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV---   79 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~---   79 (98)
                      +++|.+++... ...+++..+..++.|++.|++|||+.+++|+|+++.|+++    ...+.++++|||.+.......   
T Consensus        99 ~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili----~~~~~~kl~dfg~~~~~~~~~~~~  173 (302)
T cd07864          99 DHDLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL----NNKGQIKLADFGLARLYNSEESRP  173 (302)
T ss_pred             CccHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCcEEeCcccccccccCCcccc
Confidence            34666766544 2368899999999999999999999999999999999999    667789999999887543221   


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....++..|++||.+.
T Consensus       174 ~~~~~~~~~y~~PE~~~  190 (302)
T cd07864         174 YTNKVITLWYRPPELLL  190 (302)
T ss_pred             cccceeccCccChHHhc
Confidence            11223466799999764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.57  E-value=1.3e-14  Score=84.93  Aligned_cols=78  Identities=32%  Similarity=0.433  Sum_probs=63.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-cceecccccccCcc
Q psy11820         16 SPLPLKYIRPILHQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-CNTYLQSRYYRAPE   93 (98)
Q Consensus        16 ~~l~~~~~~~~~~~i~~~l~~lh~~-~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~~~~~~~~pe   93 (98)
                      ..+++..+..++.+++.|+.|+|+. +++|+|+++.|+++    +..+.+++.|||++....... .....++..|+|||
T Consensus       102 ~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~----~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE  177 (288)
T cd06616         102 SVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL----DRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPE  177 (288)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEE----ccCCcEEEeecchhHHhccCCccccccCccCccCHH
Confidence            4689999999999999999999974 99999999999999    556689999999886543221 12335677899999


Q ss_pred             cccC
Q psy11820         94 IILG   97 (98)
Q Consensus        94 ~~~~   97 (98)
                      ++.+
T Consensus       178 ~~~~  181 (288)
T cd06616         178 RIDP  181 (288)
T ss_pred             Hhcc
Confidence            8753

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG1151|consensus

Probab=99.56  E-value=1.3e-14  Score=88.95  Aligned_cols=93  Identities=31%  Similarity=0.455  Sum_probs=77.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc--CCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQL--GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~--~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~   78 (98)
                      +.|.+|+.|++.++  .+++++++.++-||+.|+.||...  -|||=|++|.||++... ..-+.++|.|||++.++...
T Consensus       550 ceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~G-tacGeIKITDFGLSKIMddd  626 (775)
T KOG1151|consen  550 CEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNG-TACGEIKITDFGLSKIMDDD  626 (775)
T ss_pred             cCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecC-cccceeEeeecchhhhccCC
Confidence            36789999999877  789999999999999999999975  49999999999999654 34568999999999886432


Q ss_pred             ---------ccceecccccccCccccc
Q psy11820         79 ---------VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ---------~~~~~~~~~~~~~pe~~~   96 (98)
                               ......||.||++||.+.
T Consensus       627 Sy~~vdGmeLTSQgAGTYWYLPPEcFv  653 (775)
T KOG1151|consen  627 SYNSVDGMELTSQGAGTYWYLPPECFV  653 (775)
T ss_pred             ccCcccceeeecccCceeeecCcceee
Confidence                     123347899999999864

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.56  E-value=2.4e-14  Score=83.47  Aligned_cols=89  Identities=31%  Similarity=0.482  Sum_probs=71.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++...   .++++.+..++.+++.++.++|+.+++|+|+++.|+++    ...+.+++.|||++......  .
T Consensus        85 ~~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i----~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06641          85 GGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL----SEHGEVKLADFGVAGQLTDTQIK  157 (277)
T ss_pred             CCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEE----CCCCCEEEeecccceecccchhh
Confidence            467899988643   48899999999999999999999999999999999999    66678999999988654332  1


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++..|++||.+.+
T Consensus       158 ~~~~~~~~~y~~PE~~~~  175 (277)
T cd06641         158 RNTFVGTPFWMAPEVIKQ  175 (277)
T ss_pred             hccccCCccccChhhhcc
Confidence            123356778999998643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.56  E-value=2.3e-14  Score=85.54  Aligned_cols=87  Identities=38%  Similarity=0.675  Sum_probs=69.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      ++++|.+++...   .++...+..++.|++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||.+...... ..
T Consensus        92 ~~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili----~~~~~~~l~dfg~~~~~~~~-~~  163 (328)
T cd07856          92 LGTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILI----NENCDLKICDFGLARIQDPQ-MT  163 (328)
T ss_pred             hccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeE----CCCCCEEeCccccccccCCC-cC
Confidence            356788887643   47888888999999999999999999999999999999    66678999999988654322 12


Q ss_pred             eecccccccCccccc
Q psy11820         82 TYLQSRYYRAPEIIL   96 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~   96 (98)
                      ...+++.|++||.+.
T Consensus       164 ~~~~~~~y~aPE~~~  178 (328)
T cd07856         164 GYVSTRYYRAPEIML  178 (328)
T ss_pred             CCcccccccCceeee
Confidence            334567899999764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.56  E-value=2.7e-14  Score=82.81  Aligned_cols=92  Identities=27%  Similarity=0.370  Sum_probs=72.2

Q ss_pred             cchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc
Q psy11820          2 LEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         2 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~   78 (98)
                      .+++|.+++...  ....++...++.++.+++.++.|+|+ .+++|+|+++.|+++    ...+.++++|||.+......
T Consensus        92 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~----~~~~~~~l~dfg~~~~~~~~  167 (269)
T cd08528          92 EGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML----GEDDKVTITDFGLAKQKQPE  167 (269)
T ss_pred             CCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE----CCCCcEEEecccceeecccc
Confidence            467888887532  23358889999999999999999996 679999999999999    66678999999988765432


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......++..|++||.+.+
T Consensus       168 ~~~~~~~~~~~~~~Pe~~~~  187 (269)
T cd08528         168 SKLTSVVGTILYSCPEIVKN  187 (269)
T ss_pred             cccccccCcccCcChhhhcC
Confidence             2233456778999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.55  E-value=5.4e-14  Score=77.15  Aligned_cols=78  Identities=31%  Similarity=0.365  Sum_probs=63.3

Q ss_pred             hhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccccee
Q psy11820          4 QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTY   83 (98)
Q Consensus         4 ~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~   83 (98)
                      |||.+++...+ ..+++..+..++.|++.|+.|+|+.+      ++.|+++    ...+.+++  ||.+......   ..
T Consensus         1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~----~~~~~~~~--fG~~~~~~~~---~~   64 (176)
T smart00750        1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQA------KSGNILL----TWDGLLKL--DGSVAFKTPE---QS   64 (176)
T ss_pred             CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeE----cCccceee--ccceEeeccc---cC
Confidence            68999997643 35999999999999999999999998      9999998    56667777  9987655332   22


Q ss_pred             cccccccCcccccC
Q psy11820         84 LQSRYYRAPEIILG   97 (98)
Q Consensus        84 ~~~~~~~~pe~~~~   97 (98)
                      .+++.|+|||++.+
T Consensus        65 ~g~~~y~aPE~~~~   78 (176)
T smart00750       65 RVDPYFMAPEVIQG   78 (176)
T ss_pred             CCcccccChHHhcC
Confidence            56789999999864

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.55  E-value=2.6e-14  Score=84.23  Aligned_cols=89  Identities=27%  Similarity=0.458  Sum_probs=68.4

Q ss_pred             hhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc----
Q psy11820          4 QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV----   79 (98)
Q Consensus         4 ~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~----   79 (98)
                      ++|.+.+... ...+++..+..++.|++.|+.|+|+.+++|+|+++.|+++    +..+.+++.|||++.......    
T Consensus        99 ~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~~~~~~~~  173 (311)
T cd07866          99 HDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI----DNQGILKIADFGLARPYDGPPPNPK  173 (311)
T ss_pred             cCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCCEEECcCccchhccCCCcccc
Confidence            4566655433 2368999999999999999999999999999999999999    667789999999886543211    


Q ss_pred             ---------cceecccccccCcccccC
Q psy11820         80 ---------CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ---------~~~~~~~~~~~~pe~~~~   97 (98)
                               .....+++.|+|||.+.+
T Consensus       174 ~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (311)
T cd07866         174 GGGGGGTRKYTNLVVTRWYRPPELLLG  200 (311)
T ss_pred             cCCcccccccccceeccCcCChHHhhC
Confidence                     112245677999998653

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0603|consensus

Probab=99.55  E-value=2e-14  Score=89.94  Aligned_cols=89  Identities=24%  Similarity=0.343  Sum_probs=68.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .++.|.+.+...+  .++ .++..++++++.++.|||+.|++|||+++.||++.   +..+.++|.+||.+.....+ +.
T Consensus       399 ~g~ell~ri~~~~--~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~---~~~g~lrltyFG~a~~~~~~-~~  471 (612)
T KOG0603|consen  399 DGGELLRRIRSKP--EFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD---GSAGHLRLTYFGFWSELERS-CD  471 (612)
T ss_pred             cccHHHHHHHhcc--hhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec---CCCCcEEEEEechhhhCchh-hc
Confidence            4555666555443  233 77778999999999999999999999999999993   25567999999999876554 23


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      +.+-+..|.|||++..
T Consensus       472 tp~~t~~y~APEvl~~  487 (612)
T KOG0603|consen  472 TPALTLQYVAPEVLAI  487 (612)
T ss_pred             ccchhhcccChhhhcc
Confidence            3344667999999763

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.54  E-value=7.4e-14  Score=82.92  Aligned_cols=87  Identities=41%  Similarity=0.606  Sum_probs=69.6

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccce
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT   82 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~   82 (98)
                      .|+|.+++.... ..+++..+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.+++.|||++......  ..
T Consensus       108 ~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~----~~~~~~kl~dfg~~~~~~~~--~~  180 (317)
T cd06635         108 LGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL----TEPGQVKLADFGSASIASPA--NS  180 (317)
T ss_pred             CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEE----CCCCCEEEecCCCccccCCc--cc
Confidence            467777775443 358899999999999999999999999999999999999    66678999999987643221  23


Q ss_pred             ecccccccCccccc
Q psy11820         83 YLQSRYYRAPEIIL   96 (98)
Q Consensus        83 ~~~~~~~~~pe~~~   96 (98)
                      ..+++.|+|||.+.
T Consensus       181 ~~~~~~y~aPE~~~  194 (317)
T cd06635         181 FVGTPYWMAPEVIL  194 (317)
T ss_pred             ccCCccccChhhhh
Confidence            45677899999863

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.54  E-value=4.1e-14  Score=84.82  Aligned_cols=88  Identities=31%  Similarity=0.520  Sum_probs=67.7

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc----
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----   78 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~----   78 (98)
                      +++|.+++...   .+++..+..++.|++.|+.|||+.+++|+|+++.|+++..   ....+++.|||.+......    
T Consensus        99 ~~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~---~~~~~kl~dfg~~~~~~~~~~~~  172 (342)
T cd07854          99 ETDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT---EDLVLKIGDFGLARIVDPHYSHK  172 (342)
T ss_pred             cccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC---CCceEEECCcccceecCCccccc
Confidence            45777777543   5889999999999999999999999999999999999932   3346899999988654221    


Q ss_pred             -ccceecccccccCccccc
Q psy11820         79 -VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~   96 (98)
                       ......++..|+|||.+.
T Consensus       173 ~~~~~~~~~~~y~aPE~~~  191 (342)
T cd07854         173 GYLSEGLVTKWYRSPRLLL  191 (342)
T ss_pred             cccccccccccccCHHHHh
Confidence             112234577899999764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.54  E-value=4.8e-14  Score=84.55  Aligned_cols=76  Identities=37%  Similarity=0.695  Sum_probs=62.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccceecccccccCccccc
Q psy11820         17 PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        17 ~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~pe~~~   96 (98)
                      .++...+..++.|++.|++|+|+.+++|+|+++.||++    ...+.++++|||++...... .....+++.|+|||++.
T Consensus       113 ~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll----~~~~~~kL~dfg~~~~~~~~-~~~~~~~~~y~aPE~~~  187 (342)
T cd07879         113 PLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAV----NEDCELKILDFGLARHADAE-MTGYVVTRWYRAPEVIL  187 (342)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEeeCCCCcCCCCC-CCCceeeecccChhhhc
Confidence            57888999999999999999999999999999999999    66778999999988654221 12335677899999875


Q ss_pred             C
Q psy11820         97 G   97 (98)
Q Consensus        97 ~   97 (98)
                      +
T Consensus       188 ~  188 (342)
T cd07879         188 N  188 (342)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0200|consensus

Probab=99.53  E-value=5.3e-14  Score=89.85  Aligned_cols=92  Identities=21%  Similarity=0.312  Sum_probs=72.2

Q ss_pred             cchhHHHHHhhCC------------C--CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEe
Q psy11820          2 LEQNLYDFLKQNK------------F--SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI   67 (98)
Q Consensus         2 ~~~~L~~~~~~~~------------~--~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~   67 (98)
                      ..|+|.+|++.++            .  ..++...+..++.||+.|++||++..++|||+..+|+++    .....++++
T Consensus       385 ~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi----~~~~~~kIa  460 (609)
T KOG0200|consen  385 EHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLI----TKNKVIKIA  460 (609)
T ss_pred             cCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEe----cCCCEEEEc
Confidence            4688889887665            0  138889999999999999999999999999999999999    556689999


Q ss_pred             eecCceeecccccce---ec--ccccccCcccccC
Q psy11820         68 DFGSASHVSKAVCNT---YL--QSRYYRAPEIILG   97 (98)
Q Consensus        68 ~~g~~~~~~~~~~~~---~~--~~~~~~~pe~~~~   97 (98)
                      |||+++.........   ..  -+..|||||.+..
T Consensus       461 DFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~  495 (609)
T KOG0200|consen  461 DFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD  495 (609)
T ss_pred             cccceeccCCCCceEecCCCCccceeecCHHHhcc
Confidence            999998644322211   11  2445999998763

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.52  E-value=6.4e-14  Score=82.38  Aligned_cols=90  Identities=31%  Similarity=0.447  Sum_probs=68.2

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      +++|.++..... ..+++..+..++.+++.|+.|+|+ .+++|+|+++.|+++    +..+.++|.|||.+...... ..
T Consensus        97 ~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill----~~~~~~kL~dfg~~~~~~~~~~~  171 (296)
T cd06618          97 STCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL----DASGNVKLCDFGISGRLVDSKAK  171 (296)
T ss_pred             CcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEE----cCCCCEEECccccchhccCCCcc
Confidence            345666555432 368888999999999999999997 699999999999999    66678999999987654322 11


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....++..|+|||.+.+
T Consensus       172 ~~~~~~~~y~aPE~~~~  188 (296)
T cd06618         172 TRSAGCAAYMAPERIDP  188 (296)
T ss_pred             cCCCCCccccCHhhcCC
Confidence            22235677999998753

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0670|consensus

Probab=99.52  E-value=4.5e-14  Score=87.61  Aligned_cols=92  Identities=45%  Similarity=0.660  Sum_probs=75.2

Q ss_pred             chhHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          3 EQNLYDFLKQNK-FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         3 ~~~L~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      ..+|.+.++..+ +..|....+..|+.|+..||..|-.++++|.||+|.||++.   .....++|+|||.+...+.....
T Consensus       517 slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN---E~k~iLKLCDfGSA~~~~eneit  593 (752)
T KOG0670|consen  517 SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN---ESKNILKLCDFGSASFASENEIT  593 (752)
T ss_pred             hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec---cCcceeeeccCcccccccccccc
Confidence            456777776443 34688899999999999999999999999999999999993   33457899999998877665555


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      .+..+.+|.|||++.|
T Consensus       594 PYLVSRFYRaPEIiLG  609 (752)
T KOG0670|consen  594 PYLVSRFYRAPEIILG  609 (752)
T ss_pred             HHHHHHhccCcceeec
Confidence            6667788999999986

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.51  E-value=1.2e-13  Score=81.75  Aligned_cols=87  Identities=39%  Similarity=0.552  Sum_probs=69.5

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccce
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT   82 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~   82 (98)
                      .++|.+++.... ..++...+..++.+++.|+.|+|+.+++|+|+++.|+++    ...+.++++|||.+......  ..
T Consensus        98 ~~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~----~~~~~~kl~dfg~~~~~~~~--~~  170 (308)
T cd06634          98 LGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL----SEPGLVKLGDFGSASIMAPA--NX  170 (308)
T ss_pred             CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEE----CCCCcEEECCcccceeecCc--cc
Confidence            457777765433 357889999999999999999999999999999999999    56678999999987654322  23


Q ss_pred             ecccccccCccccc
Q psy11820         83 YLQSRYYRAPEIIL   96 (98)
Q Consensus        83 ~~~~~~~~~pe~~~   96 (98)
                      ..+++.|+|||.+.
T Consensus       171 ~~~~~~y~aPE~~~  184 (308)
T cd06634         171 FVGTPYWMAPEVIL  184 (308)
T ss_pred             ccCCccccCHHHHh
Confidence            45677899999863

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.51  E-value=1.7e-13  Score=81.30  Aligned_cols=87  Identities=40%  Similarity=0.605  Sum_probs=69.2

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccce
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT   82 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~   82 (98)
                      .++|.+++.... ..+++..+..++.+++.++.|+|+.+++|+|+++.|+++    ...+.+++.|||.+.....  ...
T Consensus       104 ~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili----~~~~~~kL~dfg~~~~~~~--~~~  176 (313)
T cd06633         104 LGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL----TEPGQVKLADFGSASKSSP--ANS  176 (313)
T ss_pred             CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEE----CCCCCEEEeecCCCcccCC--CCC
Confidence            456777776543 358889999999999999999999999999999999999    5666899999998754322  123


Q ss_pred             ecccccccCccccc
Q psy11820         83 YLQSRYYRAPEIIL   96 (98)
Q Consensus        83 ~~~~~~~~~pe~~~   96 (98)
                      ..++..|+|||.+.
T Consensus       177 ~~~~~~y~aPE~~~  190 (313)
T cd06633         177 FVGTPYWMAPEVIL  190 (313)
T ss_pred             ccccccccChhhcc
Confidence            45677899999863

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.51  E-value=1.5e-13  Score=79.39  Aligned_cols=90  Identities=24%  Similarity=0.333  Sum_probs=69.9

Q ss_pred             cchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-
Q psy11820          2 LEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-   78 (98)
Q Consensus         2 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-   78 (98)
                      .+++|.+++...  ....+++..+..++.+++.|+.|+|+.+++|+|+++.|+++.    . ..+++.|||.+...... 
T Consensus        85 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~----~-~~~~l~d~g~~~~~~~~~  159 (260)
T cd08222          85 EGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----N-NLLKIGDFGVSRLLMGSC  159 (260)
T ss_pred             CCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee----c-CCEeecccCceeecCCCc
Confidence            467888887642  233688999999999999999999999999999999999993    2 35899999988654322 


Q ss_pred             -ccceecccccccCccccc
Q psy11820         79 -VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~   96 (98)
                       ......+++.|++||.+.
T Consensus       160 ~~~~~~~~~~~~~~pe~~~  178 (260)
T cd08222         160 DLATTFTGTPYYMSPEALK  178 (260)
T ss_pred             ccccCCCCCcCccCHHHHc
Confidence             122345677899999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG1345|consensus

Probab=99.49  E-value=1.1e-13  Score=80.11  Aligned_cols=87  Identities=29%  Similarity=0.400  Sum_probs=63.4

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccce
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT   82 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~   82 (98)
                      .|+|.+-+...   .+-+..-..++.|+++|+.|+|+.+++|||++.+||++..++..  ++++.|||..+..+.... .
T Consensus       106 ~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~--rvKlcDFG~t~k~g~tV~-~  179 (378)
T KOG1345|consen  106 RGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFY--RVKLCDFGLTRKVGTTVK-Y  179 (378)
T ss_pred             cchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCcc--EEEeeecccccccCceeh-h
Confidence            45666655543   36677778889999999999999999999999999999876544  899999998876543211 1


Q ss_pred             ecccccccCcccc
Q psy11820         83 YLQSRYYRAPEII   95 (98)
Q Consensus        83 ~~~~~~~~~pe~~   95 (98)
                      .-.+..|.+||.+
T Consensus       180 ~~~~~~y~~pe~~  192 (378)
T KOG1345|consen  180 LEYVNNYHAPELC  192 (378)
T ss_pred             hhhhcccCCcHHH
Confidence            1112346677654

>KOG1006|consensus

Probab=99.48  E-value=1.7e-14  Score=83.23  Aligned_cols=79  Identities=35%  Similarity=0.459  Sum_probs=63.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccce-ecccccccCc
Q psy11820         15 FSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAP   92 (98)
Q Consensus        15 ~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~-~~~~~~~~~p   92 (98)
                      ...++++.+-.+....+.|+.||.+ ..++|||++|.||++    +..+.+|+.|||++-.+..+...+ -.|...||||
T Consensus       161 ~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl----dr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAP  236 (361)
T KOG1006|consen  161 KSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL----DRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAP  236 (361)
T ss_pred             hccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE----ecCCCEeeecccchHhHHHHHHhhhccCCccccCh
Confidence            3357888888888888999999986 679999999999999    777899999999887665544333 3567789999


Q ss_pred             ccccC
Q psy11820         93 EIILG   97 (98)
Q Consensus        93 e~~~~   97 (98)
                      |.+..
T Consensus       237 ERi~p  241 (361)
T KOG1006|consen  237 ERIDP  241 (361)
T ss_pred             hccCC
Confidence            98753

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.48  E-value=3.7e-13  Score=76.41  Aligned_cols=88  Identities=39%  Similarity=0.591  Sum_probs=72.2

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-ccc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCN   81 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~   81 (98)
                      +++|.+++....  .++...+..++.+++.++.++|+.+++|+|+++.|+++    ...+.+++.|||.+...... ...
T Consensus        71 ~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~----~~~~~~~l~d~~~~~~~~~~~~~~  144 (244)
T smart00220       71 GGDLFDLLKKRG--RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILL----DEDGHVKLADFGLARQLDPGGLLT  144 (244)
T ss_pred             CCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEE----CCCCcEEEccccceeeeccccccc
Confidence            458999887654  38889999999999999999999999999999999999    55678999999988765432 223


Q ss_pred             eecccccccCccccc
Q psy11820         82 TYLQSRYYRAPEIIL   96 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~   96 (98)
                      ...++..|++||...
T Consensus       145 ~~~~~~~~~~pE~~~  159 (244)
T smart00220      145 TFVGTPEYMAPEVLL  159 (244)
T ss_pred             cccCCcCCCCHHHHc
Confidence            445677899999764

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.47  E-value=2e-13  Score=82.49  Aligned_cols=70  Identities=27%  Similarity=0.361  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHHHHHHHcCCcccCC-CCCcEEEecCCCCCccEEEeeecCceeecccc----------cceecccccccCc
Q psy11820         24 RPILHQVLTALLKLKQLGLIHADL-KPENIMLVDPVRQPYRVKVIDFGSASHVSKAV----------CNTYLQSRYYRAP   92 (98)
Q Consensus        24 ~~~~~~i~~~l~~lh~~~~~h~~l-~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~----------~~~~~~~~~~~~p   92 (98)
                      ..++.+++.++.|+|+.+++|+|+ +|.|+++    +..+.++|.|||++.......          ..+..+++.|++|
T Consensus       114 ~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv----~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~p  189 (365)
T PRK09188        114 PAWFRSAHRALRDLHRAGITHNDLAKPQNWLM----GPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAP  189 (365)
T ss_pred             HHHHHHHHHHHHHHHHCCCeeCCCCCcceEEE----cCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCc
Confidence            456789999999999999999999 8999999    555679999999998654321          1233566778999


Q ss_pred             ccccC
Q psy11820         93 EIILG   97 (98)
Q Consensus        93 e~~~~   97 (98)
                      |.+..
T Consensus       190 e~~~~  194 (365)
T PRK09188        190 DALTP  194 (365)
T ss_pred             ccCCh
Confidence            98754

>KOG2345|consensus

Probab=99.46  E-value=5.1e-13  Score=76.33  Aligned_cols=90  Identities=26%  Similarity=0.263  Sum_probs=70.6

Q ss_pred             chhHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc
Q psy11820          3 EQNLYDFLKQNK--FSPLPLKYIRPILHQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         3 ~~~L~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~--~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~   78 (98)
                      .|||.+.+.+.+  ...+++..++.++.++.+|+.++|+..  +.|+|++|.|+++    ...+.+.+.|||.+......
T Consensus       107 ~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILl----s~~~~~vl~D~GS~~~a~i~  182 (302)
T KOG2345|consen  107 RGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILL----SDSGLPVLMDLGSATQAPIQ  182 (302)
T ss_pred             cccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEe----cCCCceEEEeccCccccceE
Confidence            578888887553  346899999999999999999999988  9999999999999    55678999999977653211


Q ss_pred             --------ccc---eecccccccCccccc
Q psy11820         79 --------VCN---TYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 --------~~~---~~~~~~~~~~pe~~~   96 (98)
                              ..+   ....|..|.|||.+.
T Consensus       183 i~~~~~a~~lQe~a~e~Ct~pyRAPELf~  211 (302)
T KOG2345|consen  183 IEGSRQALRLQEWAEERCTIPYRAPELFN  211 (302)
T ss_pred             eechHHHHHHHHHHHHhCCCcccCchhee
Confidence                    011   123567799999764

>KOG0576|consensus

Probab=99.46  E-value=3.1e-14  Score=90.03  Aligned_cols=87  Identities=29%  Similarity=0.466  Sum_probs=72.4

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      +|+|++.-.-.+  .+++-.+...+++.+.|+.|+|+.+=+|||++-.|+++    ...+.++++|||.+...+..  ..
T Consensus        96 ggslQdiy~~Tg--plselqiayvcRetl~gl~ylhs~gk~hRdiKGanill----td~gDvklaDfgvsaqitati~Kr  169 (829)
T KOG0576|consen   96 GGSLQDIYHVTG--PLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILL----TDEGDVKLADFGVSAQITATIAKR  169 (829)
T ss_pred             CCcccceeeecc--cchhHHHHHHHhhhhccchhhhcCCcccccccccceee----cccCceeecccCchhhhhhhhhhh
Confidence            566777544322  68888888999999999999999999999999999999    77789999999987765432  44


Q ss_pred             ceecccccccCcccc
Q psy11820         81 NTYLQSRYYRAPEII   95 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~   95 (98)
                      ..+.|+|+|||||+-
T Consensus       170 ksfiGtpywmapEva  184 (829)
T KOG0576|consen  170 KSFIGTPYWMAPEVA  184 (829)
T ss_pred             hcccCCccccchhHH
Confidence            678999999999985

>KOG0199|consensus

Probab=99.45  E-value=2.5e-13  Score=86.85  Aligned_cols=91  Identities=25%  Similarity=0.293  Sum_probs=71.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-C   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~   80 (98)
                      ..|+|.+.+..-....|--..+-.|+.||+.|++||.++++||||+..+|+++    .....+||+|||+.+.++... .
T Consensus       193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlll----asprtVKI~DFGLmRaLg~ned~  268 (1039)
T KOG0199|consen  193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLL----ASPRTVKICDFGLMRALGENEDM  268 (1039)
T ss_pred             ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhee----cccceeeeecccceeccCCCCcc
Confidence            46899999987444567778889999999999999999999999999999999    445589999999998765321 1


Q ss_pred             c----eecccccccCccccc
Q psy11820         81 N----TYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ~----~~~~~~~~~~pe~~~   96 (98)
                      .    ...-...|.|||.+.
T Consensus       269 Yvm~p~rkvPfAWCaPEsLr  288 (1039)
T KOG0199|consen  269 YVMAPQRKVPFAWCAPESLR  288 (1039)
T ss_pred             eEecCCCcCcccccCHhHhc
Confidence            1    112234599999874

>KOG1163|consensus

Probab=99.44  E-value=6.1e-13  Score=76.07  Aligned_cols=93  Identities=20%  Similarity=0.297  Sum_probs=71.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc---
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK---   77 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---   77 (98)
                      +.|.||++++.-+. ..++.++++-++.|++.-++|+|.++.+||||+|+|++.+-. .....+.+.|||++...-.   
T Consensus        92 LLGPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlg-rh~~kl~LIDFGLaKky~d~~t  169 (341)
T KOG1163|consen   92 LLGPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLG-RHCNKLYLIDFGLAKKYRDIRT  169 (341)
T ss_pred             ccCccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccc-cccceEEEEeccchhhhccccc
Confidence            36788999887553 368999999999999999999999999999999999998543 2334678999999975422   


Q ss_pred             ------cccceecccccccCcccc
Q psy11820         78 ------AVCNTYLQSRYYRAPEII   95 (98)
Q Consensus        78 ------~~~~~~~~~~~~~~pe~~   95 (98)
                            .......||.+|.+....
T Consensus       170 ~~HIpyre~r~ltGTaRYASinAh  193 (341)
T KOG1163|consen  170 RQHIPYREDRNLTGTARYASINAH  193 (341)
T ss_pred             cccCccccCCccceeeeehhhhhh
Confidence                  122345677778765443

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.43  E-value=1.8e-12  Score=71.95  Aligned_cols=90  Identities=40%  Similarity=0.571  Sum_probs=71.9

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCC-CccEEEeeecCceeecccc--
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ-PYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~-~~~~~l~~~g~~~~~~~~~--   79 (98)
                      +++|.+++.... ..++...+..++.+++.++.++|+.+++|+|+++.|+++    .. ...+++.||+.+.......  
T Consensus        75 ~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~----~~~~~~~~l~d~~~~~~~~~~~~~  149 (215)
T cd00180          75 GGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILL----DSDNGKVKLADFGLSKLLTSDKSL  149 (215)
T ss_pred             CCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEE----eCCCCcEEEecCCceEEccCCcch
Confidence            578999987652 258889999999999999999999999999999999999    44 5689999999887654332  


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .........|++||....
T Consensus       150 ~~~~~~~~~~~~pe~~~~  167 (215)
T cd00180         150 LKTIVGTPAYMAPEVLLG  167 (215)
T ss_pred             hhcccCCCCccChhHhcc
Confidence            233445677999987643

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.43  E-value=1.6e-12  Score=73.22  Aligned_cols=88  Identities=38%  Similarity=0.588  Sum_probs=71.7

Q ss_pred             cchhHHHHHhhCCCCC-CCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          2 LEQNLYDFLKQNKFSP-LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~-l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      .+++|.+++....  . ++...+..++.+++.++.++|+.+++|+|+++.|+++    .....+++.|||.+......  
T Consensus        80 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v----~~~~~~~l~d~g~~~~~~~~~~  153 (225)
T smart00221       80 EGGDLFDYLRKKG--GKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILL----GMDGLVKLADFGLARFIHRDLA  153 (225)
T ss_pred             CCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEeeCceeeEecCccc
Confidence            3568999987654  3 7888999999999999999999999999999999999    55578999999988765432  


Q ss_pred             -ccceecccccccCcccc
Q psy11820         79 -VCNTYLQSRYYRAPEII   95 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~   95 (98)
                       ......++..|++||.+
T Consensus       154 ~~~~~~~~~~~~~~pe~~  171 (225)
T smart00221      154 ALLKTVKGTPFYLAPEVL  171 (225)
T ss_pred             ccccceeccCCcCCHhHh
Confidence             12334566789999986

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0590|consensus

Probab=99.42  E-value=1.3e-12  Score=83.35  Aligned_cols=87  Identities=31%  Similarity=0.461  Sum_probs=71.1

Q ss_pred             hHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc------
Q psy11820          5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA------   78 (98)
Q Consensus         5 ~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~------   78 (98)
                      +|+.++....  .++..++--++.|++.|+.|+|+.|+.|||++++|+++    ...+.+++.|||.+..+...      
T Consensus       406 Dlf~~~~~~~--~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~----~~~g~lki~Dfg~~~vf~~~~e~~~~  479 (601)
T KOG0590|consen  406 DLFSLVMSNG--KLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLV----TENGILKIIDFGAASVFRYPWEKNIH  479 (601)
T ss_pred             HHHHHHhccc--ccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEE----ecCCceEEeecCcceeeccCcchhhh
Confidence            6777776542  57788888899999999999999999999999999999    66678999999987654321      


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......|+..|+|||++.+
T Consensus       480 ~~~g~~gS~pY~apE~~~~  498 (601)
T KOG0590|consen  480 ESSGIVGSDPYLAPEVLTG  498 (601)
T ss_pred             hhcCcccCCcCcCcccccc
Confidence            2234578889999999865

>KOG0668|consensus

Probab=99.39  E-value=1.5e-12  Score=74.15  Aligned_cols=78  Identities=29%  Similarity=0.536  Sum_probs=61.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-cceecccccccCccc
Q psy11820         16 SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-CNTYLQSRYYRAPEI   94 (98)
Q Consensus        16 ~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~~~~~~~~pe~   94 (98)
                      .+++.-.++.++.+++.|+.|||+.||.|||++|.|+.+.   .....+++.|+|++....... ..-...+..|--||.
T Consensus       127 ~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId---h~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPEL  203 (338)
T KOG0668|consen  127 PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID---HELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL  203 (338)
T ss_pred             hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec---hhhceeeeeecchHhhcCCCceeeeeeehhhcCCchh
Confidence            3577788999999999999999999999999999999993   334578999999997654332 222345566778886


Q ss_pred             cc
Q psy11820         95 IL   96 (98)
Q Consensus        95 ~~   96 (98)
                      +.
T Consensus       204 LV  205 (338)
T KOG0668|consen  204 LV  205 (338)
T ss_pred             ee
Confidence            54

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.38  E-value=1.6e-12  Score=72.61  Aligned_cols=54  Identities=26%  Similarity=0.367  Sum_probs=48.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHH-HHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820         17 PLPLKYIRPILHQVLTALLKL-KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus        17 ~l~~~~~~~~~~~i~~~l~~l-h~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      .++...+..++.|++.++.++ |+.+++|+|++|.|+++.     ...+++.|||++...
T Consensus       113 ~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-----~~~v~LiDFG~a~~~  167 (190)
T cd05147         113 PLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-----DGKLYIIDVSQSVEH  167 (190)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-----CCcEEEEEccccccC
Confidence            688889999999999999999 799999999999999994     246999999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.38  E-value=2.3e-12  Score=85.86  Aligned_cols=85  Identities=21%  Similarity=0.239  Sum_probs=63.3

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLK---QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK   77 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~   77 (98)
                      |.+|+|.+++.     .+++.....++.+++.|+.|+|   +.+++|+|+++.|+++    +.....++. ++.......
T Consensus       765 ~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~----~~~~~~~~~-~~~~~~~~~  834 (968)
T PLN00113        765 IEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIII----DGKDEPHLR-LSLPGLLCT  834 (968)
T ss_pred             CCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEE----CCCCceEEE-ecccccccc
Confidence            46899999995     3788889999999999999999   6689999999999999    444444443 443322211


Q ss_pred             cccceecccccccCcccccC
Q psy11820         78 AVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 ~~~~~~~~~~~~~~pe~~~~   97 (98)
                        .....+++.|+|||++.+
T Consensus       835 --~~~~~~t~~y~aPE~~~~  852 (968)
T PLN00113        835 --DTKCFISSAYVAPETRET  852 (968)
T ss_pred             --CCCccccccccCcccccC
Confidence              122356788999998764

>KOG1025|consensus

Probab=99.36  E-value=2.8e-12  Score=83.27  Aligned_cols=91  Identities=22%  Similarity=0.289  Sum_probs=71.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      |+.|+|.||++..+ ..+..+..+.+..||+.|+.|||+++++|||+..+|+++..+    ..+++.|||++..+.....
T Consensus       779 mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP----~hvkitdfgla~ll~~d~~  853 (1177)
T KOG1025|consen  779 MPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSP----NHVKITDFGLAKLLAPDEK  853 (1177)
T ss_pred             cccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCC----CeEEEEecchhhccCcccc
Confidence            67899999999875 368889999999999999999999999999999999999444    4899999999987653211


Q ss_pred             --cee--cccccccCccccc
Q psy11820         81 --NTY--LQSRYYRAPEIIL   96 (98)
Q Consensus        81 --~~~--~~~~~~~~pe~~~   96 (98)
                        ...  .-.+.|||-|.+.
T Consensus       854 ey~~~~gK~pikwmale~i~  873 (1177)
T KOG1025|consen  854 EYSAPGGKVPIKWMALESIR  873 (1177)
T ss_pred             cccccccccCcHHHHHHHhh
Confidence              111  1234577776553

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.33  E-value=6.8e-12  Score=70.00  Aligned_cols=55  Identities=29%  Similarity=0.416  Sum_probs=48.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec
Q psy11820         17 PLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS   76 (98)
Q Consensus        17 ~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~   76 (98)
                      .++...+..++.+++.++.++|+ .+++|+|++|.|+++.     .+.+++.|||++....
T Consensus       113 ~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-----~~~~~liDFG~a~~~~  168 (190)
T cd05145         113 PLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-----DGKPYIIDVSQAVELD  168 (190)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-----CCCEEEEEcccceecC
Confidence            47778889999999999999999 9999999999999993     4579999999987654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK10345 hypothetical protein; Provisional

Probab=99.27  E-value=3.4e-11  Score=68.19  Aligned_cols=66  Identities=24%  Similarity=0.273  Sum_probs=50.4

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHH-HHHHHcCCcccCCCCCcEEEecCCCCCccEEEee-ecCce
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTAL-LKLKQLGLIHADLKPENIMLVDPVRQPYRVKVID-FGSAS   73 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l-~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~   73 (98)
                      ++||.+++.+.   .+++.  ...+.+++.++ .|||+++|+|+|++|.||++.........++|.| ||...
T Consensus        91 ~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~  158 (210)
T PRK10345         91 SITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGEST  158 (210)
T ss_pred             chhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcc
Confidence            58999999753   35544  35567888777 8999999999999999999965443455799999 55443

>KOG1024|consensus

Probab=99.27  E-value=1.3e-11  Score=74.88  Aligned_cols=90  Identities=18%  Similarity=0.205  Sum_probs=69.3

Q ss_pred             hhHHHHHhhC------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc
Q psy11820          4 QNLYDFLKQN------KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK   77 (98)
Q Consensus         4 ~~L~~~~~~~------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~   77 (98)
                      |+|+.|+..+      ....++...+..++.|+..|+.|+|+++++|+||..+|++|    ++...+++.|-.+++.+-.
T Consensus       373 gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI----dd~LqVkltDsaLSRDLFP  448 (563)
T KOG1024|consen  373 GNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI----DDQLQVKLTDSALSRDLFP  448 (563)
T ss_pred             chHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee----hhheeEEeccchhccccCc
Confidence            6888888733      23356777788899999999999999999999999999999    6667899999999886533


Q ss_pred             cccce---e-cccccccCcccccC
Q psy11820         78 AVCNT---Y-LQSRYYRAPEIILG   97 (98)
Q Consensus        78 ~~~~~---~-~~~~~~~~pe~~~~   97 (98)
                      ....+   . -.+..||+||.+..
T Consensus       449 ~DYhcLGDnEnRPvkWMslEal~n  472 (563)
T KOG1024|consen  449 GDYHCLGDNENRPVKWMSLEALQN  472 (563)
T ss_pred             ccccccCCCCCCcccccCHHHHhh
Confidence            22111   1 12346999998763

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.26  E-value=5.2e-11  Score=69.69  Aligned_cols=92  Identities=40%  Similarity=0.520  Sum_probs=71.8

Q ss_pred             cchhHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCc-cEEEeeecCceeeccc-
Q psy11820          2 LEQNLYDFLKQNKF-SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY-RVKVIDFGSASHVSKA-   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~-~~~l~~~g~~~~~~~~-   78 (98)
                      .++++.+++..... ..++......+..+++.++.++|+.+++|||+++.|+++    .... .+++.|||.+...... 
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~----~~~~~~~~l~dfg~~~~~~~~~  156 (384)
T COG0515          81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILL----DRDGRVVKLIDFGLAKLLPDPG  156 (384)
T ss_pred             CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeee----cCCCCeEEEeccCcceecCCCC
Confidence            35667766654321 257889999999999999999999999999999999999    5544 6899999988754322 


Q ss_pred             -------ccceecccccccCcccccC
Q psy11820         79 -------VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -------~~~~~~~~~~~~~pe~~~~   97 (98)
                             ......++..|++||...+
T Consensus       157 ~~~~~~~~~~~~~~t~~~~~pe~~~~  182 (384)
T COG0515         157 STSSIPALPSTSVGTPGYMAPEVLLG  182 (384)
T ss_pred             ccccccccccccccccccCCHHHhcC
Confidence                   2345678899999998764

>KOG4158|consensus

Probab=99.23  E-value=9e-11  Score=71.54  Aligned_cols=90  Identities=29%  Similarity=0.285  Sum_probs=66.3

Q ss_pred             hhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec---cc--
Q psy11820          4 QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS---KA--   78 (98)
Q Consensus         4 ~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~---~~--   78 (98)
                      .+|.+|+..+   ..+......++.|+++|+.|||++++.|||++++||++.-.++.-..+.++|||++.--.   .+  
T Consensus       327 ~tLr~yl~~~---~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlp  403 (598)
T KOG4158|consen  327 QTLREYLWTR---HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLP  403 (598)
T ss_pred             hhHHHHHhcC---CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccc
Confidence            4788888755   366677788899999999999999999999999999996655556678999999764211   11  


Q ss_pred             ---ccceecccccccCccccc
Q psy11820         79 ---VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ---~~~~~~~~~~~~~pe~~~   96 (98)
                         ......|--..||||+..
T Consensus       404 y~S~~Vd~GGNa~lmAPEi~t  424 (598)
T KOG4158|consen  404 YESDEVDLGGNAKLMAPEIAT  424 (598)
T ss_pred             cccccccCCCcceecchhhhh
Confidence               111223444589999864

>KOG1166|consensus

Probab=99.21  E-value=9.2e-11  Score=77.71  Aligned_cols=93  Identities=23%  Similarity=0.373  Sum_probs=72.1

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCC---CccEEEeeecCceeecc--
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ---PYRVKVIDFGSASHVSK--   77 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~---~~~~~l~~~g~~~~~~~--   77 (98)
                      -|||.+++..++  .+++..+.++..|++.-|..+|+.+|||+||+|+|+++..+...   ...++|.|||.+..+..  
T Consensus       778 ~Gtlld~~N~~~--~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp  855 (974)
T KOG1166|consen  778 YGTLLDLINTNK--VMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFP  855 (974)
T ss_pred             cccHHHhhccCC--CCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcC
Confidence            589999998655  78999999999999999999999999999999999999554332   34689999999876532  


Q ss_pred             -c-ccceecccccccCcccccC
Q psy11820         78 -A-VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 -~-~~~~~~~~~~~~~pe~~~~   97 (98)
                       . .....+++-.+-++|+..|
T Consensus       856 ~~~~F~~~~~td~f~C~EM~~g  877 (974)
T KOG1166|consen  856 DGTKFKAVWHTDLFDCIEMREG  877 (974)
T ss_pred             CCcEEeeeeccccchhHHHhcC
Confidence             1 1223345556777777655

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.16  E-value=1.7e-10  Score=65.21  Aligned_cols=48  Identities=27%  Similarity=0.327  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHHHHHHHcCCcccCC-CCCcEEEecCCCCCccEEEeeecCceee
Q psy11820         24 RPILHQVLTALLKLKQLGLIHADL-KPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus        24 ~~~~~~i~~~l~~lh~~~~~h~~l-~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      ..++.++..++.++|+.|++|+|+ ++.||++    +..+.+++.|||++...
T Consensus        94 ~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv----~~~g~i~LIDFG~A~~~  142 (218)
T PRK12274         94 LAYFRAARRLLQQLHRCGVAHNDLAKEANWLV----QEDGSPAVIDFQLAVRG  142 (218)
T ss_pred             HHHHHHHHHHHHHHHHCcCccCCCCCcceEEE----cCCCCEEEEECCCceec
Confidence            346788999999999999999999 6899999    55567999999998754

>smart00090 RIO RIO-like kinase

Probab=99.14  E-value=8.5e-11  Score=67.71  Aligned_cols=55  Identities=24%  Similarity=0.321  Sum_probs=46.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcC-CcccCCCCCcEEEecCCCCCccEEEeeecCceeec
Q psy11820         17 PLPLKYIRPILHQVLTALLKLKQLG-LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS   76 (98)
Q Consensus        17 ~l~~~~~~~~~~~i~~~l~~lh~~~-~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~   76 (98)
                      .+....+..++.+++.++.++|+.+ ++|+|++|.|+++.     ...+++.|||.+....
T Consensus       144 ~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-----~~~i~LiDFg~a~~~~  199 (237)
T smart00090      144 EPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-----DGKVVIIDVSQSVELD  199 (237)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-----CCCEEEEEChhhhccC
Confidence            3555667788999999999999999 99999999999993     4578999999886543

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.11  E-value=5.7e-10  Score=64.38  Aligned_cols=61  Identities=25%  Similarity=0.425  Sum_probs=48.0

Q ss_pred             hhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820          4 QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus         4 ~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      .+|.+++...   .++...    ..+++.++.++|+.|++|+|+++.||++    +....+++.|||.+...
T Consensus       132 ~~L~~~l~~~---~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv----~~~~~v~LIDfg~~~~~  192 (239)
T PRK01723        132 RDLVALLQEA---PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILL----DPDGKFWLIDFDRGELR  192 (239)
T ss_pred             CCHHHHHhcC---CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEE----cCCCCEEEEECCCcccC
Confidence            5788877542   354433    4688999999999999999999999999    44457999999987653

>KOG0603|consensus

Probab=99.04  E-value=7.5e-11  Score=74.35  Aligned_cols=86  Identities=29%  Similarity=0.345  Sum_probs=70.4

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccce
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT   82 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~   82 (98)
                      +|+|...+....  .+.+..+..+..+++-++.++|+.+++++|+++.|+++    +..+.+++.|||+++..-..... 
T Consensus        81 gg~lft~l~~~~--~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill----d~~Ghi~~tdfglske~v~~~~~-  153 (612)
T KOG0603|consen   81 GGDLFTRLSKEV--MFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL----LLEGHIKLTDFGLSKEAVKEKIA-  153 (612)
T ss_pred             cchhhhccccCC--chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee----cccCccccCCchhhhHhHhhhhc-
Confidence            455555554433  56788899999999999999999999999999999999    88889999999998875443222 


Q ss_pred             ecccccccCccccc
Q psy11820         83 YLQSRYYRAPEIIL   96 (98)
Q Consensus        83 ~~~~~~~~~pe~~~   96 (98)
                       +|+..|||||+..
T Consensus       154 -cgt~eymApEI~~  166 (612)
T KOG0603|consen  154 -CGTYEYRAPEIIN  166 (612)
T ss_pred             -ccchhhhhhHhhh
Confidence             7888999999975

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.02  E-value=1.8e-09  Score=60.85  Aligned_cols=62  Identities=27%  Similarity=0.404  Sum_probs=51.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .|++|.+++....     . ....++.++..++.++|+.+++|+|+++.|+++.     ...+++.|||.+..
T Consensus        82 ~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-----~~~~~liDf~~a~~  143 (211)
T PRK14879         82 EGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-----GGKIYLIDFGLAEF  143 (211)
T ss_pred             CCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-----CCCEEEEECCcccC
Confidence            4678888876432     1 6678889999999999999999999999999994     45689999998764

>KOG1290|consensus

Probab=99.02  E-value=1e-09  Score=68.06  Aligned_cols=54  Identities=44%  Similarity=0.739  Sum_probs=50.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEe
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLV   55 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~   55 (98)
                      +|-+|..++..+.+..++...+..+++|++.||.|||. ++|||.||+|+|+++-
T Consensus       168 LGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  168 LGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC  222 (590)
T ss_pred             hhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence            56789999999988899999999999999999999997 6899999999999983

>KOG1033|consensus

Probab=99.02  E-value=1.4e-10  Score=71.91  Aligned_cols=89  Identities=30%  Similarity=0.470  Sum_probs=69.3

Q ss_pred             chhHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          3 EQNLYDFLKQNK-FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         3 ~~~L~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      -.+|.+|+...+ ...-+.......+.|+..|+.|   ++.+|+|+++.||+.    .....++|.|||+.......   
T Consensus       340 ~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~----~~d~q~kIgDFgl~ts~~~~~~~  412 (516)
T KOG1033|consen  340 KETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFF----SDDDQLKIGDFGLVTSQDKDETV  412 (516)
T ss_pred             hhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhcccccccc----ccchhhhhhhhhheeecccCCcc
Confidence            468999997443 2345677788889999999999   999999999999998    55557899999987765332   


Q ss_pred             -----ccceecccccccCcccccCC
Q psy11820         79 -----VCNTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        79 -----~~~~~~~~~~~~~pe~~~~~   98 (98)
                           ......++++||+||.+.|+
T Consensus       413 ~~~~a~~t~~~gt~~YmsPEQi~g~  437 (516)
T KOG1033|consen  413 APAAASHTQQVGTLLYMSPEQIRGQ  437 (516)
T ss_pred             cchhhhhhhcccccccCCHHHHhhh
Confidence                 22345789999999998764

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.98  E-value=1.8e-09  Score=60.48  Aligned_cols=60  Identities=25%  Similarity=0.433  Sum_probs=47.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      .|++|.+++....  .       .++.+++.++.++|+.+++|+|+++.|+++.     ...+++.|||.+...
T Consensus        80 ~g~~l~~~~~~~~--~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-----~~~~~liDfg~a~~~  139 (199)
T TIGR03724        80 EGKPLKDVIEEGN--D-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-----DDKLYLIDFGLGKYS  139 (199)
T ss_pred             CCccHHHHHhhcH--H-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-----CCcEEEEECCCCcCC
Confidence            4667777664321  0       6788999999999999999999999999994     457899999987653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.95  E-value=2.7e-09  Score=67.76  Aligned_cols=59  Identities=27%  Similarity=0.403  Sum_probs=47.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      .+++|.+++.          ....++.+++.++.++|+.+++|+|++|.|+++.     ...+++.|||++...
T Consensus       419 ~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~-----~~~~~liDFGla~~~  477 (535)
T PRK09605        419 GGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR-----DDRLYLIDFGLGKYS  477 (535)
T ss_pred             CCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE-----CCcEEEEeCcccccC
Confidence            3556666553          2356788999999999999999999999999992     236899999998653

>KOG1167|consensus

Probab=98.91  E-value=4.8e-09  Score=63.76  Aligned_cols=54  Identities=37%  Similarity=0.564  Sum_probs=46.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820         17 PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus        17 ~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      .++...+..|++.++.|+.++|++||+|||++|.|++....   ...-.|.|||++.
T Consensus       128 ~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~---t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  128 SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRR---TQRGVLVDFGLAQ  181 (418)
T ss_pred             cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccc---cCCceEEechhHH
Confidence            46678899999999999999999999999999999998433   3456789999986

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.91  E-value=6.4e-09  Score=58.34  Aligned_cols=52  Identities=23%  Similarity=0.422  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc
Q psy11820         22 YIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK   77 (98)
Q Consensus        22 ~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~   77 (98)
                      ....++.+++.++.++|+.+++|+|++|.|+++    +....+++.|||.+.....
T Consensus       126 ~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill----~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         126 DPEEVLDEILEEIVKAYKHGIIHGDLSEFNILV----DDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             cHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEE----cCCCcEEEEECCccccCCC
Confidence            345678899999999999999999999999999    5566899999998865543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.87  E-value=4.2e-09  Score=62.10  Aligned_cols=67  Identities=27%  Similarity=0.352  Sum_probs=45.2

Q ss_pred             HHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccceecccccccCcccc
Q psy11820         24 RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEII   95 (98)
Q Consensus        24 ~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~pe~~   95 (98)
                      ..+..|++..++++|+.|++|+|+++.|+++    +..+.+.|.||+.....+..... ...+..|.+||..
T Consensus       148 l~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll----~~~G~v~Lg~F~~~~r~g~~~~~-~~~~~~~~PPe~~  214 (288)
T PF14531_consen  148 LSLTVQMIRLVANLHSYGLVHGDIKPENFLL----DQDGGVFLGDFSSLVRAGTRYRC-SEFPVAFTPPELE  214 (288)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-----TTS-EEE--GGGEEETTEEEEG-GGS-TTTS-HHHH
T ss_pred             HHHHHHHHHHHHHHhhcceEecccceeeEEE----cCCCCEEEcChHHHeecCceeec-cCCCcccCChhhh
Confidence            3445888999999999999999999999999    77889999999866554332211 2234568888864

>KOG1240|consensus

Probab=98.87  E-value=2.5e-09  Score=71.76  Aligned_cols=64  Identities=36%  Similarity=0.427  Sum_probs=52.9

Q ss_pred             hHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820          5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus         5 ~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      +|+|.+....  .+...+-.-++.|++.|+..||+.|++|+||+.+||++    ..=.++.|.||.-..+
T Consensus       106 nLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILi----TSWNW~~LtDFAsFKP  169 (1431)
T KOG1240|consen  106 NLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILI----TSWNWLYLTDFASFKP  169 (1431)
T ss_pred             hhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEE----eeechhhhhcccccCC
Confidence            6778887665  35666677789999999999999999999999999999    5545889999985543

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.80  E-value=1.5e-08  Score=56.13  Aligned_cols=50  Identities=30%  Similarity=0.424  Sum_probs=44.0

Q ss_pred             HHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820         21 KYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus        21 ~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      .....++.+++.++.++|. .+++|+|++|.|+++.     ...+++.|||.+...
T Consensus       114 ~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-----~~~~~liDfg~a~~~  164 (187)
T cd05119         114 EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-----DGKVYIIDVPQAVEI  164 (187)
T ss_pred             ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-----CCcEEEEECcccccc
Confidence            4567888999999999999 9999999999999994     557899999988654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0606|consensus

Probab=98.67  E-value=8.5e-09  Score=68.92  Aligned_cols=64  Identities=30%  Similarity=0.480  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-----------------ccceecccccccCc
Q psy11820         30 VLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-----------------VCNTYLQSRYYRAP   92 (98)
Q Consensus        30 i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-----------------~~~~~~~~~~~~~p   92 (98)
                      ++.+++|+|..+|+|+|+++.|.++    ...+.+++.|||++......                 .....+++|.|.||
T Consensus       152 mvla~Eylh~ygivhrdlkpdnllI----T~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaP  227 (1205)
T KOG0606|consen  152 MVLAVEYLHSYGIVHRDLKPDNLLI----TSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAP  227 (1205)
T ss_pred             hhHHhHhhccCCeecCCCCCCccee----eecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccCh
Confidence            4678999999999999999999999    77889999999987642110                 11234789999999


Q ss_pred             ccccC
Q psy11820         93 EIILG   97 (98)
Q Consensus        93 e~~~~   97 (98)
                      |++..
T Consensus       228 eVilr  232 (1205)
T KOG0606|consen  228 EVILR  232 (1205)
T ss_pred             hhhhh
Confidence            99863

>KOG1023|consensus

Probab=98.65  E-value=5.2e-08  Score=61.07  Aligned_cols=91  Identities=22%  Similarity=0.380  Sum_probs=68.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCC-cccCCCCCcEEEecCCCCCccEEEeeecCceeecc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGL-IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK---   77 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~-~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---   77 (98)
                      ..|+|.|.+.... ..+++-....+.++++.|++|+|...+ .|..++..|+++    +.++.+++.+||+......   
T Consensus        30 ~rGsl~D~i~~~~-~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClv----d~~w~lklt~~Gl~~~~~~~~~  104 (484)
T KOG1023|consen   30 SRGSLLDILSNED-IKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLV----DSRWVLKLTDFGLNSLLEETAE  104 (484)
T ss_pred             cCccHHhHHhccc-cCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccccee----eeeEEEEechhhhccccccccc
Confidence            4689999997632 346777777888999999999998655 899999999999    7788999999998765532   


Q ss_pred             -cccceecccccccCcccccC
Q psy11820         78 -AVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 -~~~~~~~~~~~~~~pe~~~~   97 (98)
                       ...........|.|||.+.+
T Consensus       105 ~~~~~~~~~~~lw~aPellr~  125 (484)
T KOG1023|consen  105 PEAHHPIRKALLWTAPELLRG  125 (484)
T ss_pred             ccccchhHHHHhccCHHHhcc
Confidence             11111123345899998765

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.60  E-value=1.3e-07  Score=54.38  Aligned_cols=45  Identities=16%  Similarity=0.349  Sum_probs=38.3

Q ss_pred             HHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820         26 ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus        26 ~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      ...++..++..+|+.+++|+|++|.|+++    ...+ +++.|||.....
T Consensus       140 ~~~~i~~~l~~lH~~gi~H~Dikp~Nili----~~~g-i~liDfg~~~~~  184 (232)
T PRK10359        140 VKAKIKASIESLHQHGMVSGDPHKGNFIV----SKNG-LRIIDLSGKRCT  184 (232)
T ss_pred             HHHHHHHHHHHHHHcCCccCCCChHHEEE----eCCC-EEEEECCCcccc
Confidence            35689999999999999999999999999    4444 999999977544

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.57  E-value=8.5e-07  Score=52.20  Aligned_cols=69  Identities=22%  Similarity=0.300  Sum_probs=52.0

Q ss_pred             hHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecC---CCCCccEEEeeecCce
Q psy11820          5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDP---VRQPYRVKVIDFGSAS   73 (98)
Q Consensus         5 ~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~---~~~~~~~~l~~~g~~~   73 (98)
                      +|.+++........+......++.++...+.-||..|++|+|+.+.||++...   ......+.+.||+.+.
T Consensus       122 sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        122 SLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             cHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            67777753211234556677888999999999999999999999999999531   1224578999999774

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.50  E-value=1.3e-06  Score=49.56  Aligned_cols=68  Identities=31%  Similarity=0.464  Sum_probs=52.6

Q ss_pred             hhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820          4 QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus         4 ~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .+|.+++....  ..+.+....++.++...+.-||+.|++|+|+.+.||++.... ....+.+.||+.+..
T Consensus       103 ~~L~~~~~~~~--~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~-~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  103 QDLRDLLQQWE--QLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDD-GQYRFYLIDLDRMRF  170 (206)
T ss_pred             ccHHHHHHhhc--ccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCC-CceeEEEEcchhcee
Confidence            36777776532  255566778889999999999999999999999999995532 334788999987654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG3087|consensus

Probab=98.50  E-value=1.6e-06  Score=48.56  Aligned_cols=69  Identities=23%  Similarity=0.284  Sum_probs=51.1

Q ss_pred             hHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820          5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus         5 ~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ++.+++.......-..+....+++.+=..+.-||.++++|+|+...||++... .....+.+.|||++..
T Consensus        97 ~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~-~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   97 TVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSD-GNQITPILIDFGLSSV  165 (229)
T ss_pred             HHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecC-CCcCceEEEeecchhc
Confidence            66776654432233344446788888888999999999999999999999654 2344568999998864

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.45  E-value=8.3e-07  Score=50.00  Aligned_cols=54  Identities=30%  Similarity=0.373  Sum_probs=44.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHH-HHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec
Q psy11820         18 LPLKYIRPILHQVLTALLKL-KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS   76 (98)
Q Consensus        18 l~~~~~~~~~~~i~~~l~~l-h~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~   76 (98)
                      ++.+.+..+..+++.++..+ |+.+++|+|+++.||++..     +.+.+.||+.+....
T Consensus       121 ~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~~-----~~v~iIDF~qav~~~  175 (197)
T cd05146         121 LNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWHD-----GKVWFIDVSQSVEPT  175 (197)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEC-----CcEEEEECCCceeCC
Confidence            44455666778999999988 8999999999999999932     368999999887654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0590|consensus

Probab=98.41  E-value=4.4e-08  Score=63.14  Aligned_cols=77  Identities=29%  Similarity=0.355  Sum_probs=62.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHH-HcCCcccCCCCCcEEEecCCCCCc-cEEEeeecCceeecc-c----ccceecc-ccc
Q psy11820         17 PLPLKYIRPILHQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPY-RVKVIDFGSASHVSK-A----VCNTYLQ-SRY   88 (98)
Q Consensus        17 ~l~~~~~~~~~~~i~~~l~~lh-~~~~~h~~l~~~~~~~~~~~~~~~-~~~l~~~g~~~~~~~-~----~~~~~~~-~~~   88 (98)
                      ..+......++.|+..++.|+| ..++.|+|++|.|.++    .... .++++|||++..... .    .....+| ++.
T Consensus       119 ~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l----~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~  194 (601)
T KOG0590|consen  119 GTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLL----DESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPP  194 (601)
T ss_pred             CCCCcchhhhhhhhccCccccCcccccccCCCCCccchh----ccCCCcccCCCchhhccccccCCcceeeecccCCCCC
Confidence            3556678889999999999999 9999999999999998    5555 789999999876544 1    2233456 889


Q ss_pred             ccCcccccC
Q psy11820         89 YRAPEIILG   97 (98)
Q Consensus        89 ~~~pe~~~~   97 (98)
                      |++||...+
T Consensus       195 y~a~E~~~~  203 (601)
T KOG0590|consen  195 YGAPEHLSG  203 (601)
T ss_pred             CCCcccccc
Confidence            999999875

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.33  E-value=4.7e-06  Score=46.59  Aligned_cols=58  Identities=33%  Similarity=0.467  Sum_probs=43.2

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      |..|.+++...         ...++..+=.-+.-||..+++|+|+.+.|+.+..     ..+.+.|||++..
T Consensus        83 G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~-----~~i~~IDfGLg~~  140 (204)
T COG3642          83 GELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSG-----GRIYFIDFGLGEF  140 (204)
T ss_pred             ChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeC-----CcEEEEECCcccc
Confidence            44556666543         1345566666688899999999999999999833     2489999999864

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.33  E-value=2e-06  Score=45.51  Aligned_cols=50  Identities=34%  Similarity=0.412  Sum_probs=41.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHc---CCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         21 KYIRPILHQVLTALLKLKQL---GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        21 ~~~~~~~~~i~~~l~~lh~~---~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .....+..++..++..+|..   +++|+|+++.|+++    .....+++.||+.+..
T Consensus        86 ~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~----~~~~~~~l~Df~~~~~  138 (155)
T cd05120          86 EEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILV----DDGKILGIIDWEYAGY  138 (155)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEE----ECCcEEEEEecccccC
Confidence            45567788899999999984   69999999999999    4456799999998764

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0195|consensus

Probab=98.28  E-value=2e-06  Score=50.90  Aligned_cols=90  Identities=14%  Similarity=0.129  Sum_probs=59.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~   78 (98)
                      |+.|+|+..+.......++..++..++-.++.|++|||+..  +..--+.+..+.+..  +...++.++|.-++.+.   
T Consensus       269 mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmide--dltarismad~kfsfqe---  343 (448)
T KOG0195|consen  269 MPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDE--DLTARISMADTKFSFQE---  343 (448)
T ss_pred             ccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecc--hhhhheecccceeeeec---
Confidence            67899999998776555677888899999999999999964  334456777788732  11223344443333211   


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                        ....-+|.||+||.++.
T Consensus       344 --~gr~y~pawmspealqr  360 (448)
T KOG0195|consen  344 --VGRAYSPAWMSPEALQR  360 (448)
T ss_pred             --cccccCcccCCHHHHhc
Confidence              11122478999998864

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.22  E-value=6.2e-06  Score=51.70  Aligned_cols=48  Identities=27%  Similarity=0.479  Sum_probs=38.1

Q ss_pred             HHHHHHHH-HHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec
Q psy11820         25 PILHQVLT-ALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS   76 (98)
Q Consensus        25 ~~~~~i~~-~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~   76 (98)
                      .++..++. .+..+|..|++|+|++|.|+++    ...+.+++.|||++..+.
T Consensus       260 ~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv----~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       260 ALAENLARSFLNQVLRDGFFHADLHPGNIFV----LKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             HHHHHHHHHHHHHHHhCCceeCCCCcccEEE----CCCCcEEEEeCCCeeECC
Confidence            34444444 3677899999999999999999    556689999999987654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK09902 hypothetical protein; Provisional

Probab=98.16  E-value=2.4e-05  Score=44.63  Aligned_cols=69  Identities=16%  Similarity=0.187  Sum_probs=52.7

Q ss_pred             hhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820          4 QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus         4 ~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .||.+++........+...-..+..++...+.-||+.++.|+|+-+.||++...+  ...+.+.||.-++.
T Consensus       111 ~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g--~~~v~lIDlEk~r~  179 (216)
T PRK09902        111 ISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEG--KAEAGFLDLEKSRR  179 (216)
T ss_pred             ccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCC--CeeEEEEEhhccch
Confidence            5788887654323445565677889999999999999999999999999995321  33589999986654

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.09  E-value=1.3e-05  Score=43.70  Aligned_cols=45  Identities=33%  Similarity=0.383  Sum_probs=37.4

Q ss_pred             HHHHHHHHHHHHHHHcCC-----cccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         25 PILHQVLTALLKLKQLGL-----IHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        25 ~~~~~i~~~l~~lh~~~~-----~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ....+++.+++.+|+.++     +|+|+++.|+++.     ...+++.||+.+..
T Consensus        87 ~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-----~~~~~liDf~~a~~  136 (170)
T cd05151          87 ENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-----DGRLWLIDWEYAGM  136 (170)
T ss_pred             HHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-----CCeEEEEecccccC
Confidence            446788999999999885     9999999999993     33689999998754

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0601|consensus

Probab=97.85  E-value=1.7e-05  Score=50.52  Aligned_cols=91  Identities=27%  Similarity=0.365  Sum_probs=67.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHH----HHHHHHHcCCcccCCCCCcEEEecCCCCC-ccEEEeeecCceeec
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLT----ALLKLKQLGLIHADLKPENIMLVDPVRQP-YRVKVIDFGSASHVS   76 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~----~l~~lh~~~~~h~~l~~~~~~~~~~~~~~-~~~~l~~~g~~~~~~   76 (98)
                      ++.+|.++...-. ..++...++....+...    |+.++|+.+++|.++++.|+.+    ... ...++.+|++...++
T Consensus       200 ~~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~----~~~~~s~~~~df~~v~~i~  274 (524)
T KOG0601|consen  200 CGESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFT----TSDWTSCKLTDFGLVSKIS  274 (524)
T ss_pred             ccchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheec----ccccceeecCCcceeEEcc
Confidence            4567777776543 24777888888888888    9999999999999999999998    444 678899999877664


Q ss_pred             cccc-------ceecccccccCcccccC
Q psy11820         77 KAVC-------NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        77 ~~~~-------~~~~~~~~~~~pe~~~~   97 (98)
                      ....       ....+...|++||...+
T Consensus       275 ~~~~~~~~~~~~r~~~~~~Y~~ke~~~~  302 (524)
T KOG0601|consen  275 DGNFSSVFKVSKRPEGDCIYAAKELLNG  302 (524)
T ss_pred             CCccccceeeeecCCCCceEeChhhhcc
Confidence            3211       11134556999987653

>KOG1266|consensus

Probab=97.84  E-value=4.5e-05  Score=46.39  Aligned_cols=64  Identities=28%  Similarity=0.338  Sum_probs=51.6

Q ss_pred             CcchhHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecCCCCCccEEEee
Q psy11820          1 MLEQNLYDFLKQNK--FSPLPLKYIRPILHQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRVKVID   68 (98)
Q Consensus         1 ~~~~~L~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~--~~h~~l~~~~~~~~~~~~~~~~~~l~~   68 (98)
                      |.-|++.+++++.+  ...+......+++.||++|+.|||+..  ++|.++..+.+++    ..++.+++..
T Consensus       154 mssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifi----q~ngLIkig~  221 (458)
T KOG1266|consen  154 MSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFI----QHNGLIKIGS  221 (458)
T ss_pred             ccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheee----cCCceEEecc
Confidence            45688888887553  224667788899999999999999976  8999999999999    6667777654

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.79  E-value=6.7e-05  Score=42.14  Aligned_cols=51  Identities=35%  Similarity=0.638  Sum_probs=36.5

Q ss_pred             HHHHHHHHHHHHHHHH-HHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec
Q psy11820         21 KYIRPILHQVLTALLK-LKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS   76 (98)
Q Consensus        21 ~~~~~~~~~i~~~l~~-lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~   76 (98)
                      +....+..+++..+.. +|+.|++|+|++..||++..    . .+.+.||+.+....
T Consensus       106 ~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~----~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen  106 EEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDD----G-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             STHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEET----T-CEEE--GTTEEETT
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeec----c-eEEEEecCcceecC
Confidence            3455666777775555 57999999999999999933    3 79999999887654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.62  E-value=0.00014  Score=46.84  Aligned_cols=40  Identities=28%  Similarity=0.455  Sum_probs=30.9

Q ss_pred             HHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec
Q psy11820         37 LKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS   76 (98)
Q Consensus        37 lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~   76 (98)
                      +...|++|+|++|.|+++.......+.+.+.|||+...+.
T Consensus       276 if~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        276 VFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             HHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence            4468999999999999994432233489999999887653

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.62  E-value=0.0005  Score=43.50  Aligned_cols=78  Identities=12%  Similarity=0.232  Sum_probs=59.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee-cccccceecccccccCcc
Q psy11820         15 FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV-SKAVCNTYLQSRYYRAPE   93 (98)
Q Consensus        15 ~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~~~~~~~~~~~~~~pe   93 (98)
                      +....+..+...++.++.+.+.+|..|..-+|+.+.++++    .+...+.+.|-...... ......+..+...|.+||
T Consensus       111 ~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lV----sd~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPE  186 (637)
T COG4248         111 YPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLV----SDDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPE  186 (637)
T ss_pred             CCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceee----ecCceEEEEcccceeeccCCceEecccCccccCCHH
Confidence            3456788899999999999999999999999999999999    55557777775533322 222345667888899998


Q ss_pred             ccc
Q psy11820         94 IIL   96 (98)
Q Consensus        94 ~~~   96 (98)
                      ...
T Consensus       187 lQ~  189 (637)
T COG4248         187 LQT  189 (637)
T ss_pred             Hhc
Confidence            653

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.27  E-value=0.0014  Score=37.94  Aligned_cols=43  Identities=21%  Similarity=0.495  Sum_probs=34.6

Q ss_pred             HHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820         26 ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus        26 ~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      +...+..++.-+|+.|+.|+|..|.|+++..     ..+.+.|++...
T Consensus       140 ~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~-----~~i~iID~~~k~  182 (229)
T PF06176_consen  140 LAEKIVEAIKQLHKHGFYHGDPHPGNFLVSN-----NGIRIIDTQGKR  182 (229)
T ss_pred             HHHHHHHHHHHHHHcCCccCCCCcCcEEEEC-----CcEEEEECcccc
Confidence            3456778899999999999999999999832     248899987554

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG3741|consensus

Probab=96.78  E-value=0.006  Score=39.62  Aligned_cols=52  Identities=19%  Similarity=0.338  Sum_probs=43.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCc
Q psy11820         17 PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA   72 (98)
Q Consensus        17 ~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~   72 (98)
                      .+++..++.++.|+..|+.++|+.|+..+-+.+.+|++    ....+++++.-|..
T Consensus       389 ~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv----~G~~RIriS~C~i~  440 (655)
T KOG3741|consen  389 KAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILV----TGKMRIRISGCGIM  440 (655)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEe----eCcceEEEecccce
Confidence            46789999999999999999999999999999999999    55556776655443

>KOG0601|consensus

Probab=96.65  E-value=0.0017  Score=41.81  Aligned_cols=54  Identities=30%  Similarity=0.375  Sum_probs=44.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         18 LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        18 l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      +++...+.+..|++.++.++|+..++|.|+++.||++...+   +..++.++++...
T Consensus       363 ~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~---~~~~~~~~~~~t~  416 (524)
T KOG0601|consen  363 LDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG---FFSKLGDFGCWTR  416 (524)
T ss_pred             cCcchhhhhHHHHHhccccccchhhhcccccccceeeccch---hhhhccccccccc
Confidence            55667788889999999999999999999999999994321   5778888887753

>KOG2137|consensus

Probab=96.63  E-value=0.0015  Score=43.05  Aligned_cols=67  Identities=22%  Similarity=0.309  Sum_probs=47.2

Q ss_pred             HHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c----------cceecccccccCccc
Q psy11820         27 LHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V----------CNTYLQSRYYRAPEI   94 (98)
Q Consensus        27 ~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~----------~~~~~~~~~~~~pe~   94 (98)
                      +.++++|+.|+|. -+++|+++.|.++.+    ...+..|+..|+++...... .          .........|.+||+
T Consensus       105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~----na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~  180 (700)
T KOG2137|consen  105 LGNVADGLAFLHRSAKVVHGNIQPEAIVV----NANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEY  180 (700)
T ss_pred             hhcccchhhhhccCcceeecccchhheee----ccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchh
Confidence            4467789999996 579999999999999    66678899999876543221 0          011122345889998


Q ss_pred             ccC
Q psy11820         95 ILG   97 (98)
Q Consensus        95 ~~~   97 (98)
                      +.+
T Consensus       181 ~~~  183 (700)
T KOG2137|consen  181 LLG  183 (700)
T ss_pred             hcc
Confidence            754

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=96.52  E-value=0.041  Score=31.38  Aligned_cols=63  Identities=27%  Similarity=0.366  Sum_probs=41.7

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEee-ecCc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVID-FGSA   72 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~-~g~~   72 (98)
                      ..||.+++....   ++. .+...+   -.-..|+-+.+|+..|+++.||++.........+.+.| ||..
T Consensus       107 s~TL~~~l~~~~---~~~-~~~~~L---~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~  170 (199)
T PF10707_consen  107 SPTLEDYLKEGG---LTE-ELRQAL---DEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEK  170 (199)
T ss_pred             CccHHHHHHcCC---ccH-HHHHHH---HHHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCCCCc
Confidence            467889986543   554 333333   33366788999999999999999977655443455554 5544

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG1243|consensus

Probab=96.35  E-value=0.014  Score=38.76  Aligned_cols=50  Identities=20%  Similarity=0.221  Sum_probs=41.0

Q ss_pred             HHHHHHHHHHHHHHHHHHH-HcCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820         20 LKYIRPILHQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus        20 ~~~~~~~~~~i~~~l~~lh-~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      ...+.--+.||+.||.||| +.+++|+++.-..+++    ...+.-+|.+|....
T Consensus       103 ~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV----n~~GeWkLggle~v~  153 (690)
T KOG1243|consen  103 KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV----NESGEWKLGGLELVS  153 (690)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE----cCCCcEEEeeeEEEe
Confidence            3444555789999999997 6789999999999999    667788999887654

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=96.12  E-value=0.033  Score=33.55  Aligned_cols=52  Identities=27%  Similarity=0.420  Sum_probs=40.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820         20 LKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus        20 ~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      .+.+..++..|+.-+.-.-..|++|+|++.=||++    ...+.+.+.||-.+...
T Consensus       201 ~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV----~~dg~~~vIDwPQ~v~~  252 (304)
T COG0478         201 VENPDEILDKILEEVRKAYRRGIVHGDLSEFNILV----TEDGDIVVIDWPQAVPI  252 (304)
T ss_pred             ccCHHHHHHHHHHHHHHHHHcCccccCCchheEEE----ecCCCEEEEeCcccccC
Confidence            44455566667776666669999999999999999    66778999999776654

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=95.74  E-value=0.059  Score=32.04  Aligned_cols=50  Identities=24%  Similarity=0.355  Sum_probs=40.5

Q ss_pred             HHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec
Q psy11820         22 YIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS   76 (98)
Q Consensus        22 ~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~   76 (98)
                      ++..+..+++..+.-|-. .+++|.|++.=|+++.     .+.+.+.|++.+....
T Consensus       167 e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-----~~~p~iID~~QaV~~~  217 (268)
T COG1718         167 EAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-----DGEPYIIDVSQAVTID  217 (268)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-----CCeEEEEECccccccC
Confidence            466667778888887777 8999999999999993     4478999999887653

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=94.99  E-value=0.11  Score=29.36  Aligned_cols=53  Identities=25%  Similarity=0.276  Sum_probs=44.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHH---cCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820         17 PLPLKYIRPILHQVLTALLKLKQ---LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus        17 ~l~~~~~~~~~~~i~~~l~~lh~---~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      .-++.....++.+++..+.+++.   ..+.-.|++++|+.+    ...+.+++.|.....
T Consensus        55 ~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv----~~~~~lk~iDld~v~  110 (188)
T PF12260_consen   55 QSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGV----NDDGRLKLIDLDDVF  110 (188)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEE----eCCCcEEEEechhcc
Confidence            35788899999999999999987   447889999999999    566689999987554

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG1235|consensus

Probab=94.95  E-value=0.35  Score=31.91  Aligned_cols=57  Identities=23%  Similarity=0.307  Sum_probs=37.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec
Q psy11820         18 LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS   76 (98)
Q Consensus        18 l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~   76 (98)
                      ++...+...+.+..  ..-+-..|.+|.|-.|.|+++.........+.+.|||+.....
T Consensus       300 i~~~~i~~~l~~~~--~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  300 ISPHDILNKLVEAY--LEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS  356 (538)
T ss_pred             CCHHHHHHHHHHHH--HHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence            55544443333222  2234467899999999999996433356688999999876543

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=93.99  E-value=0.26  Score=29.73  Aligned_cols=30  Identities=43%  Similarity=0.579  Sum_probs=24.4

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      .+++|+|+.+.|+++    .......+.||+.+.
T Consensus       187 ~~l~HgD~~~~Nvl~----~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       187 RGVIHADLFPDNVLF----DGDSVKGVIDFYFAC  216 (307)
T ss_pred             CccCCCCCCcCcEEE----ECCceEEEeeccccc
Confidence            679999999999999    444456899998763

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PRK05231 homoserine kinase; Provisional

Probab=93.94  E-value=0.074  Score=32.15  Aligned_cols=30  Identities=37%  Similarity=0.463  Sum_probs=23.9

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      .+++|+|+.+.|+++    .......+.||+.+.
T Consensus       187 ~~liHgD~~~~Nil~----~~~~~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDNVLF----EGDRLSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCcEEE----ECCceEEEEeccccc
Confidence            479999999999999    333356899998764

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=93.71  E-value=0.37  Score=28.97  Aligned_cols=29  Identities=38%  Similarity=0.531  Sum_probs=23.0

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      .+++|+|+.+.|+++.    . ..+.+.||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~----~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLK----D-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEe----C-CcEEEEECcccc
Confidence            4689999999999983    3 357899998553

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=93.59  E-value=0.079  Score=29.92  Aligned_cols=33  Identities=30%  Similarity=0.532  Sum_probs=24.6

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ..++|+|+.+.|+++...  ....+.+.||+.+..
T Consensus       174 ~~l~HgD~~~~Nil~~~~--~~~~~~iID~e~~~~  206 (223)
T cd05154         174 PGLVHGDYRLGNVLFHPD--EPRVVAVLDWELATL  206 (223)
T ss_pred             cEEEECCCCcccEEEcCC--CCcEEEEEecccccc
Confidence            568999999999999321  134578999987653

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=93.57  E-value=0.084  Score=30.56  Aligned_cols=30  Identities=33%  Similarity=0.533  Sum_probs=23.6

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      ..++|+|+.+.|+++    +......+.||+.+.
T Consensus       164 ~~l~HGD~~~~Nvlv----~~~~i~giIDw~~a~  193 (235)
T cd05155         164 PVWFHGDLAPGNLLV----QDGRLSAVIDFGCLG  193 (235)
T ss_pred             ceEEeCCCCCCcEEE----ECCCEEEEEeCcccC
Confidence            458999999999999    333456799999764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=93.43  E-value=0.35  Score=28.91  Aligned_cols=30  Identities=40%  Similarity=0.482  Sum_probs=24.0

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      .+++|+|+.+.|+++    +....+.+.||+.+.
T Consensus       175 ~~l~HgD~~~~Nil~----~~~~~~~iIDfe~a~  204 (296)
T cd05153         175 RGVIHADLFRDNVLF----DGDELSGVIDFYFAC  204 (296)
T ss_pred             CcCCccCcCcccEEE----eCCceEEEeehhhhc
Confidence            468999999999999    444456899998654

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]

Probab=93.05  E-value=0.51  Score=29.09  Aligned_cols=61  Identities=25%  Similarity=0.277  Sum_probs=38.5

Q ss_pred             hhCCCCCCCHHHHHHHHHHHHHHHH-HHH--HcCCcccCCCCCcEEEecCCCCCccEEEeeecCc
Q psy11820         11 KQNKFSPLPLKYIRPILHQVLTALL-KLK--QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA   72 (98)
Q Consensus        11 ~~~~~~~l~~~~~~~~~~~i~~~l~-~lh--~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~   72 (98)
                      ....+.+++..+...+. ++..++. -+.  ...++|||..++|+++........++.+.||-=+
T Consensus       169 pr~~g~~l~~~~r~~~~-aiwd~Lid~~~~~~~vlvhRDfh~~NLmw~~~~~g~~rvGvlDFQDA  232 (351)
T COG3178         169 PRHLGRPLTDAERQAWE-AIWDGLIDSLLAQPKVLVHRDFHSRNLMWTADRAGADRVGVLDFQDA  232 (351)
T ss_pred             HHHhCCCCCHHHHHHHH-HHHHHHHHHHhcCCceeeeccccCccceecCCccCCCCCceeehhhh
Confidence            44445567655544332 3333322 122  3568999999999999776555668889998544

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=92.16  E-value=0.83  Score=30.11  Aligned_cols=38  Identities=34%  Similarity=0.612  Sum_probs=30.9

Q ss_pred             HHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec
Q psy11820         35 LKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS   76 (98)
Q Consensus        35 ~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~   76 (98)
                      ..+-..|+.|.|..|.|+++    ...+.+...|||+...+.
T Consensus       279 ~q~~~dgffHaDpHpGNi~v----~~~g~i~~lDfGi~g~l~  316 (517)
T COG0661         279 RQLLRDGFFHADPHPGNILV----RSDGRIVLLDFGIVGRLD  316 (517)
T ss_pred             HHHHhcCccccCCCccceEE----ecCCcEEEEcCcceecCC
Confidence            33445899999999999999    666789999999876553

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=92.03  E-value=0.46  Score=29.39  Aligned_cols=28  Identities=36%  Similarity=0.687  Sum_probs=22.6

Q ss_pred             CcccCCCCCcEEEecCCCCCc-cEEEeeecCce
Q psy11820         42 LIHADLKPENIMLVDPVRQPY-RVKVIDFGSAS   73 (98)
Q Consensus        42 ~~h~~l~~~~~~~~~~~~~~~-~~~l~~~g~~~   73 (98)
                      +||.|+.+.|+++    +... .+.+.||+-+.
T Consensus       199 iIH~D~~~~NVl~----d~~~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLF----DDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeE----cCCCCeeeEEEccccc
Confidence            8999999999999    3333 47899998654

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=91.99  E-value=0.21  Score=29.04  Aligned_cols=30  Identities=27%  Similarity=0.283  Sum_probs=24.1

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      ..++|+|+.+.|+++    +......|.||+.+.
T Consensus       163 ~~l~HgD~~~~Nil~----~~~~~~~iIDwe~a~  192 (244)
T cd05150         163 LVVTHGDACLPNIIV----DPGKFSGFIDLGRLG  192 (244)
T ss_pred             eEEECCCCCCccEEE----eCCcEEEEEEccccc
Confidence            458999999999999    444457899998764

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=91.95  E-value=0.92  Score=29.06  Aligned_cols=51  Identities=20%  Similarity=0.257  Sum_probs=38.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         19 PLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        19 ~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .++++..++++.+.-+.-+.+ ...-||++.-.|+++    + .+.+.+.||-+++.
T Consensus       319 ~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLI----d-~GnvtLIDfklsRl  370 (488)
T COG5072         319 RSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILI----D-EGNVTLIDFKLSRL  370 (488)
T ss_pred             cHHHHHHHHHHHHHHHhhhhhcCCcccccccccceee----e-cCceEEEEeeeeec
Confidence            366777777776665444444 347799999999999    5 67899999999874

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=91.86  E-value=0.38  Score=27.68  Aligned_cols=32  Identities=31%  Similarity=0.405  Sum_probs=24.3

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ..++|+|+.+.|+++...   ...+.+.||..+..
T Consensus       170 ~~l~H~Dl~~~Nil~~~~---~~~~~lIDwe~a~~  201 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEE---KNSVKFIDYEYAGY  201 (235)
T ss_pred             EEEEcCCCCcCcEEEeCC---CCCEEEEEcccCCc
Confidence            358999999999999321   24689999986643

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=91.82  E-value=0.12  Score=29.27  Aligned_cols=32  Identities=41%  Similarity=0.589  Sum_probs=20.0

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ..++|+|+.+.|+++..   ..+.+.+.||+.+..
T Consensus       166 ~~~~HgD~~~~Nil~~~---~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  166 PVLIHGDLHPGNILVDP---SDGRIGIIDFEDAGW  197 (239)
T ss_dssp             EEEE-SS-SGGGEEEES---STTEEEE--GTT-EE
T ss_pred             cEEEEeccccccceeee---ccceeEEEecccceE
Confidence            45899999999999941   334458999987754

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=91.75  E-value=0.22  Score=29.90  Aligned_cols=34  Identities=35%  Similarity=0.558  Sum_probs=24.4

Q ss_pred             CCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         41 GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        41 ~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .++|+|+.+.|+++.........+.+.||..+..
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            5799999999999932100125689999987653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG1290|consensus

Probab=91.20  E-value=0.17  Score=32.99  Aligned_cols=36  Identities=47%  Similarity=0.778  Sum_probs=24.5

Q ss_pred             CccEEEeeecCceeecccccceecccccccCcccccC
Q psy11820         61 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        61 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~pe~~~~   97 (98)
                      ...+||+|||.+-+....- ..-..|.-|.|||++.|
T Consensus       390 di~vKIaDlGNACW~~khF-T~DIQTRQYRapEVllG  425 (590)
T KOG1290|consen  390 DIRVKIADLGNACWVHKHF-TEDIQTRQYRAPEVLLG  425 (590)
T ss_pred             ceeEEEeeccchhhhhhhh-chhhhhhhccCcceeec
Confidence            3478999999876543221 22245667999999986

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=91.18  E-value=0.24  Score=28.73  Aligned_cols=28  Identities=21%  Similarity=0.296  Sum_probs=22.5

Q ss_pred             CCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820         41 GLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus        41 ~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      .++|+|+.+.|+++    ...+ +.+.||+.+.
T Consensus       154 ~~~HgD~~~~Nii~----~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       154 TCLHGDFQIGNLIT----SGKG-TYWIDLGDFG  181 (226)
T ss_pred             ceEecCCCCCcEEE----cCCC-cEEEechhcC
Confidence            46899999999999    4444 8899998664

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG0606|consensus

Probab=90.97  E-value=0.11  Score=36.78  Aligned_cols=62  Identities=23%  Similarity=0.269  Sum_probs=47.2

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeec
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG   70 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g   70 (98)
                      +++|...+....  ..+..-+..+...++.+.+++|+..+.|+++++.+.++    ...+..++.+|+
T Consensus       888 ~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~----~~~gh~~l~~~~  949 (1205)
T KOG0606|consen  888 GGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLI----AYDGHRPLTDFG  949 (1205)
T ss_pred             cCCchhhhhcCC--CcccccccchhHHHHhhhhccccchhhcccccccchhh----cccCCcccCccc
Confidence            456666666544  46666677778888899999999999999999999998    555556666665

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=90.93  E-value=0.22  Score=30.63  Aligned_cols=31  Identities=26%  Similarity=0.450  Sum_probs=25.1

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ..++|+|+++.|+++    .....+.+.||+.+..
T Consensus       198 ~~lvHGD~~~gNlii----~~~~~~gVlDwe~~~l  228 (321)
T COG3173         198 PVLVHGDYRPGNLII----DPGRPTGVLDWELATL  228 (321)
T ss_pred             ceeeeCCcccCCEEE----eCCCeeEEEecccccc
Confidence            358999999999999    5545589999987753

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=90.46  E-value=1.3  Score=26.59  Aligned_cols=29  Identities=31%  Similarity=0.421  Sum_probs=24.5

Q ss_pred             CCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820         41 GLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus        41 ~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      -++|.|+.+.|++.    ...+.+.+.||.-+.
T Consensus       154 v~cH~Dl~~~N~l~----t~~~~l~LIDWEyAg  182 (269)
T COG0510         154 VPCHNDLNPGNLLL----TDKGGLFLIDWEYAG  182 (269)
T ss_pred             eeecCCCCccceEE----cCCCcEEEEecccCC
Confidence            47899999999998    555789999997664

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=90.04  E-value=0.75  Score=26.61  Aligned_cols=38  Identities=37%  Similarity=0.568  Sum_probs=30.4

Q ss_pred             HHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCc
Q psy11820         26 ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA   72 (98)
Q Consensus        26 ~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~   72 (98)
                      -+.++.+-+..+|+.+|+-+|++..|..         .-++.||+.+
T Consensus       169 ~~~~~~~dl~~~~k~gI~~~Dv~~~ny~---------~G~lvDfs~~  206 (207)
T PF13095_consen  169 DIPQMLRDLKILHKLGIVPRDVKPRNYR---------GGKLVDFSSS  206 (207)
T ss_pred             HHHHHHHHHHHHHHCCeeeccCcccccc---------CCEEEecccC
Confidence            3567778888999999999999998887         2477788754

>KOG2268|consensus

Probab=89.59  E-value=1.6  Score=27.71  Aligned_cols=44  Identities=30%  Similarity=0.573  Sum_probs=33.3

Q ss_pred             HHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCc
Q psy11820         25 PILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA   72 (98)
Q Consensus        25 ~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~   72 (98)
                      .+...+..-+.-|..+|+||+|+.--|+++    .....+.+.||=..
T Consensus       206 ~ly~~lm~~Iv~la~~GlIHgDFNEFNimv----~dd~~i~vIDFPQm  249 (465)
T KOG2268|consen  206 TLYDDLMGLIVRLANHGLIHGDFNEFNIMV----KDDDKIVVIDFPQM  249 (465)
T ss_pred             HHHHHHHHHHHHHHHcCceecccchheeEE----ecCCCEEEeechHh
Confidence            334445555667888999999999999999    55567888988644

>PRK10271 thiK thiamine kinase; Provisional

Probab=89.25  E-value=0.52  Score=26.81  Aligned_cols=28  Identities=21%  Similarity=0.405  Sum_probs=22.0

Q ss_pred             CCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820         41 GLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus        41 ~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      ..+|+|+.+.|+++    ...+ +++.|++.+.
T Consensus        78 ~p~H~D~~~~N~~~----~~~~-~~lIDwe~a~  105 (188)
T PRK10271         78 APLHMDVHAGNLVH----SASG-LRLIDWEYAG  105 (188)
T ss_pred             eeecCCCCCccEEE----ECCC-EEEEeCCccc
Confidence            35899999999987    3333 7899998764

>TIGR02721 ycfN_thiK thiamine kinase

Probab=89.08  E-value=0.45  Score=27.94  Aligned_cols=28  Identities=29%  Similarity=0.449  Sum_probs=22.1

Q ss_pred             CCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820         41 GLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus        41 ~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      .++|+|+.+.|+++.    ..+ +.+.||..+.
T Consensus       147 ~l~H~Dl~~~Nil~~----~~~-~~lIDwE~a~  174 (256)
T TIGR02721       147 APLHMDVHAYNLVVT----PQG-LKLIDWEYAS  174 (256)
T ss_pred             eeecCCCCcCcEEEe----CCC-CEEEeccccC
Confidence            579999999999993    322 6899998664

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=88.97  E-value=0.43  Score=28.61  Aligned_cols=31  Identities=29%  Similarity=0.506  Sum_probs=23.2

Q ss_pred             CCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         41 GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        41 ~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .++|+|+.+.|+++..   ......+.||+.+..
T Consensus       186 ~lvHGD~~~~Nilv~~---~~~~~gviDWe~a~i  216 (276)
T cd05152         186 VLVHGDLHPGHILIDE---DARVTGLIDWTEAKV  216 (276)
T ss_pred             eeEeCCCCCCcEEEeC---CCCEEEEECcHhccc
Confidence            4899999999999932   123467999987653

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=88.91  E-value=1.6  Score=26.51  Aligned_cols=30  Identities=23%  Similarity=0.302  Sum_probs=24.6

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      .+++|+|+...|+++    ...+.+.+.||..+.
T Consensus       196 ~~lcHgD~~~~Nvl~----~~~~~~~iIDfd~~~  225 (309)
T TIGR02904       196 TVLVHGKLSLSHFLY----DETRGGYFINFEKAS  225 (309)
T ss_pred             eeeeCCCCcHHhEEE----cCCCCEEEEEhhhcc
Confidence            368999999999999    555578889988664

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PRK06149 hypothetical protein; Provisional

Probab=87.75  E-value=1.5  Score=31.18  Aligned_cols=35  Identities=26%  Similarity=0.349  Sum_probs=24.7

Q ss_pred             HcCCcccCCCCCcEEEecCCCCC-ccEEEeeecCce
Q psy11820         39 QLGLIHADLKPENIMLVDPVRQP-YRVKVIDFGSAS   73 (98)
Q Consensus        39 ~~~~~h~~l~~~~~~~~~~~~~~-~~~~l~~~g~~~   73 (98)
                      ..+++|.|+...|+++....... ....+.|||-+.
T Consensus       207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~  242 (972)
T PRK06149        207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLV  242 (972)
T ss_pred             cccccCCCCCcccEEEcCCCCCCcceeEEEEcccch
Confidence            46799999999999995421111 235899999653

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=85.29  E-value=1.1  Score=25.39  Aligned_cols=35  Identities=34%  Similarity=0.348  Sum_probs=25.0

Q ss_pred             cCCcccCCCCCcEEEecCCC-CCccEEEeeecCcee
Q psy11820         40 LGLIHADLKPENIMLVDPVR-QPYRVKVIDFGSASH   74 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~-~~~~~~l~~~g~~~~   74 (98)
                      ..++|+|+.+.|+++..... ....+.+.||..+..
T Consensus       120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~  155 (196)
T smart00587      120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHY  155 (196)
T ss_pred             eEEeeCCCCccceeeccCCCCCccceEEEecccCCc
Confidence            45799999999999953211 122678999987654

subfamily of choline kinases

>PLN02236 choline kinase

Probab=84.78  E-value=2.3  Score=26.41  Aligned_cols=32  Identities=34%  Similarity=0.586  Sum_probs=24.4

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ..++|+|+.+.|+++..   ....+.+.||..+..
T Consensus       200 ~~~cH~Dl~~~Nil~~~---~~~~~~lID~Eya~~  231 (344)
T PLN02236        200 IGFCHNDLQYGNIMIDE---ETRAITIIDYEYASY  231 (344)
T ss_pred             ceEEeCCCCcCcEEEeC---CCCcEEEEeehhccc
Confidence            35799999999999832   124689999987653

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=84.69  E-value=0.67  Score=31.32  Aligned_cols=35  Identities=23%  Similarity=0.326  Sum_probs=22.4

Q ss_pred             cEEEeeecCceeeccc----ccceecccccccCcccccC
Q psy11820         63 RVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        63 ~~~l~~~g~~~~~~~~----~~~~~~~~~~~~~pe~~~~   97 (98)
                      ...+.+|+.+......    ......||+.|+|||++.+
T Consensus       516 ~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~  554 (669)
T cd05610         516 VKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLG  554 (669)
T ss_pred             ccccccCCCchhhhcccccccCCceeeCccccCHHHcCC
Confidence            3466677766543221    1234578999999999865

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PRK06148 hypothetical protein; Provisional

Probab=82.00  E-value=1.8  Score=30.95  Aligned_cols=33  Identities=30%  Similarity=0.345  Sum_probs=24.0

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      .+++|.|+...|+++..... .....+.|||-+.
T Consensus       203 ~~vIHgDln~~NiLv~~~~~-~~isGiIDFgDa~  235 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDG-ERISGLIDFGDAV  235 (1013)
T ss_pred             cceECCCCCcccEEEcCCCC-cceEEEEECcccc
Confidence            56999999999999943211 1345699999654

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=81.69  E-value=1.4  Score=27.98  Aligned_cols=17  Identities=47%  Similarity=0.987  Sum_probs=14.4

Q ss_pred             cCCcccCCCCCcEEEec
Q psy11820         40 LGLIHADLKPENIMLVD   56 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~   56 (98)
                      .+.+|-|++|.|+++-.
T Consensus       298 ~nF~H~DLKPdNILiFd  314 (434)
T PF05445_consen  298 TNFLHVDLKPDNILIFD  314 (434)
T ss_pred             ceeeecccCcCcEEEec
Confidence            35799999999999844

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>PRK11768 serine/threonine protein kinase; Provisional

Probab=80.87  E-value=1.3  Score=27.19  Aligned_cols=28  Identities=32%  Similarity=0.516  Sum_probs=22.2

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      .+++|+|+.+.|+++    ..  ...+.||+-+.
T Consensus       196 ~~liHgD~h~~NvL~----~d--~~~iIDFDd~~  223 (325)
T PRK11768        196 LLRLHGDCHPGNILW----RD--GPHFVDLDDAR  223 (325)
T ss_pred             ccceecCCCchhccc----cC--CcEEEeCCCCC
Confidence            468999999999998    22  36789998654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	98
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		3e-15
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		3e-15
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		1e-14
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		3e-13
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		4e-13
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		4e-13
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		9e-12
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		2e-11
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		2e-10
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		2e-10
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		2e-10
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		3e-09
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		5e-08
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		6e-08
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		1e-07
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		1e-07
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		1e-07
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		1e-07
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		1e-07
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		1e-07
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		2e-07
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		2e-07
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		2e-07
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		2e-07
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		2e-07
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		6e-07
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		6e-07
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		6e-07
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		7e-07
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		7e-07
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		7e-07
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		7e-07
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		7e-07
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		7e-07
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		7e-07
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		7e-07
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		9e-07
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		9e-07
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		9e-07
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		1e-06
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-06
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		1e-06
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		1e-06
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		1e-06
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		1e-06
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		1e-06
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		1e-06
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		1e-06
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		1e-06
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		1e-06
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-06
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		1e-06
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		1e-06
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		1e-06
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		1e-06
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-06
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		1e-06
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		1e-06
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		1e-06
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		1e-06
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		1e-06
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		1e-06
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		1e-06
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-06
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-06
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		1e-06
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-06
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-06
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-06
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		2e-06
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		2e-06
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-06
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-06
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		2e-06
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-06
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-06
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-06
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-06
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		2e-06
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		2e-06
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		2e-06
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		2e-06
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		2e-06
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		2e-06
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		2e-06
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		2e-06
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		2e-06
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		2e-06
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		2e-06
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-06
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-06
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		2e-06
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		2e-06
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-06
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-06
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		2e-06
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		2e-06
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		2e-06
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		2e-06
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		2e-06
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-06
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		2e-06
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		2e-06
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		2e-06
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-06
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		2e-06
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		2e-06
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-06
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		2e-06
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		3e-06
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		3e-06
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		3e-06
3hec_A	348	P38 In Complex With Imatinib Length = 348		3e-06
2oza_B	366	Structure Of P38alpha Complex Length = 366		3e-06
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		3e-06
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		3e-06
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		3e-06
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		3e-06
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		3e-06
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		3e-06
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		3e-06
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		3e-06
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		3e-06
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		3e-06
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		3e-06
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		3e-06
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		3e-06
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		3e-06
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		3e-06
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		3e-06
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		3e-06
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		3e-06
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		3e-06
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		3e-06
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		3e-06
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		3e-06
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		3e-06
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		3e-06
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		3e-06
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		3e-06
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		3e-06
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		3e-06
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		3e-06
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		3e-06
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		4e-06
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		4e-06
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		4e-06
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		4e-06
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		4e-06
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-06
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		4e-06
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		4e-06
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-06
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-06
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		5e-06
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		5e-06
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		5e-06
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		5e-06
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		5e-06
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		5e-06
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		5e-06
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		5e-06
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		5e-06
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		5e-06
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		5e-06
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		5e-06
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		5e-06
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		5e-06
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		5e-06
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		5e-06
4exu_A	371	Mapk13, Inactive Form Length = 371		5e-06
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		6e-06
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		7e-06
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		7e-06
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		7e-06
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		8e-06
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		8e-06
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		1e-05
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		1e-05
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		1e-05
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		2e-05
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-05
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		2e-05
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		2e-05
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		2e-05
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-05
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		2e-05
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		2e-05
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		2e-05
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		2e-05
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		3e-05
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		3e-05
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		3e-05
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-05
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		4e-05
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		5e-05
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		5e-05
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		8e-05
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		9e-05
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		9e-05
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		1e-04
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		1e-04
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		1e-04
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		1e-04
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		1e-04
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		1e-04
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		1e-04
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		1e-04
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		1e-04
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-04
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-04
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		1e-04
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		2e-04
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		2e-04
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-04
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-04
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		2e-04
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-04
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-04
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-04
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-04
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-04
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		2e-04
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		2e-04
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		3e-04
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		3e-04
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		3e-04
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		3e-04
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		3e-04
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		3e-04
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		3e-04
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-04
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		4e-04
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		4e-04
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		4e-04
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		4e-04
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		4e-04
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		4e-04
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		4e-04
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		4e-04
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		4e-04
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		4e-04
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		4e-04
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		4e-04
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-04
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		5e-04
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		5e-04
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		5e-04
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		5e-04
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-04
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		5e-04
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		5e-04
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		5e-04
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		7e-04
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		7e-04
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		9e-04

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           +L  NLY+ +K+NKF    L  +R   H +            IH DLKPENI+L    R 
Sbjct: 180 LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRS 239
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
              +KVIDFGS+ +  + V  T +QSR+YRAPE+ILG
Sbjct: 240 G--IKVIDFGSSCYEHQRV-YTXIQSRFYRAPEVILG 273

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           +L  NLY+ +K+NKF    L  +R   H +            IH DLKPENI+L    R 
Sbjct: 180 LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRS 239
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
              +KVIDFGS+ +  + V  T +QSR+YRAPE+ILG
Sbjct: 240 G--IKVIDFGSSCYEHQRV-YTXIQSRFYRAPEVILG 273

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           +L  NLY+ +K+NKF    L  +R   H +            IH DLKPENI+L    R 
Sbjct: 180 LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRS 239
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
              +KVIDFGS+ +  + V    +QSR+YRAPE+ILG
Sbjct: 240 G--IKVIDFGSSCYEHQRV-YXXIQSRFYRAPEVILG 273

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXX--XXXIHADLKPENIMLVDPV 58
           ML  NLYD L+   F  + L   R    Q+              IH DLKPENI+L +P 
Sbjct: 137 MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPK 196
Query: 59  RQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           R    +K++DFGS+  + + +    +QSR+YR+PE++LG
Sbjct: 197 RSA--IKIVDFGSSCQLGQRIYQX-IQSRFYRSPEVLLG 232

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXX--XXXIHADLKPENIMLVDPV 58
           ML  NLYD L+   F  + L   R    Q+              IH DLKPENI+L +P 
Sbjct: 118 MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPK 177
Query: 59  RQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           R    +K++DFGS+  + + +    +QSR+YR+PE++LG
Sbjct: 178 RSA--IKIVDFGSSCQLGQRIYQX-IQSRFYRSPEVLLG 213

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXX--XXXIHADLKPENIMLVDPV 58
           ML  NLYD L+   F  + L   R    Q+              IH DLKPENI+L +P 
Sbjct: 137 MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPK 196
Query: 59  RQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           R    +K++DFGS+  + + +    +QSR+YR+PE++LG
Sbjct: 197 RXA--IKIVDFGSSCQLGQRIYQX-IQSRFYRSPEVLLG 232

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 16/112 (14%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDP--- 57
           +L  + YDF+K+N F P  L +IR + +Q+             H DLKPENI+ V     
Sbjct: 98  LLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYT 157
Query: 58  ------VRQPYR------VKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
                 +++  R      +KV+DFGSA++  +   +T + +R+YRAPE+IL 
Sbjct: 158 EAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH-STLVSTRHYRAPEVILA 208

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 16/112 (14%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDP--- 57
           +L  + YDF+K+N F P  L +IR + +Q+             H DLKPENI+ V     
Sbjct: 98  LLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYT 157
Query: 58  ------VRQPYR------VKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
                 +++  R      +KV+DFGSA++  +   +T +  R+YRAPE+IL 
Sbjct: 158 EAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH-STLVXXRHYRAPEVILA 208

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 16/111 (14%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           +L +N ++FLK+N F P PL ++R + +Q+             H DLKPENI+ V+   +
Sbjct: 135 LLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFE 194
Query: 61  PY---------------RVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 96
                             ++V DFGSA+        T + +R+YR PE+IL
Sbjct: 195 TLYNEHKSCEEKSVKNTSIRVADFGSAT-FDHEHHTTIVATRHYRPPEVIL 244

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 16/111 (14%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           +L +N ++FLK+N F P PL ++R + +Q+             H DLKPENI+ V+   +
Sbjct: 112 LLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFE 171
Query: 61  PY---------------RVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 96
                             ++V DFGSA+        T + +R+YR PE+IL
Sbjct: 172 TLYNEHKSCEEKSVKNTSIRVADFGSAT-FDHEHHTTIVATRHYRPPEVIL 221

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 16/111 (14%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           +L +N ++FLK+N F P PL ++R + +Q+             H DLKPENI+ V+   +
Sbjct: 103 LLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFE 162
Query: 61  PY---------------RVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 96
                             ++V DFGSA+        T + +R+YR PE+IL
Sbjct: 163 TLYNEHKSCEEKSVKNTSIRVADFGSAT-FDHEHHTTIVATRHYRPPEVIL 212

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 16/111 (14%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDP--- 57
           +L  + +DFLK N + P P+  +R +  Q+             H DLKPENI+ V+    
Sbjct: 117 LLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYE 176
Query: 58  ------------VRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 96
                         +   V+V+DFGSA+       +T + +R+YRAPE+IL
Sbjct: 177 LTYNLEKKRDERSVKSTAVRVVDFGSAT-FDHEHHSTIVSTRHYRAPEVIL 226

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXX-XIHADLKPENIML--VDP 57
           +L +NL   +K+ +   +PL Y++ I  Q+             IH D+KPEN+++  VD 
Sbjct: 111 VLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDS 170
Query: 58  VRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
                ++K+ D G+A    +   N+ +Q+R YR+PE++LG
Sbjct: 171 PENLIQIKIADLGNACWYDEHYTNS-IQTREYRSPEVLLG 209

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXX-XIHADLKPENIML--VDP 57
           +L +NL   +K+ +   +PL Y++ I  Q+             IH D+KPEN+++  VD 
Sbjct: 111 VLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDS 170
Query: 58  VRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
                ++K+ D G+A    +   N+ +Q+R YR+PE++LG
Sbjct: 171 PENLIQIKIADLGNACWYDEHYTNS-IQTREYRSPEVLLG 209

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 175
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N +Y+ SRYYRAPE+I G
Sbjct: 176 GEPNVSYICSRYYRAPELIFG 196

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 175
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N +Y+ SRYYRAPE+I G
Sbjct: 176 GEPNVSYICSRYYRAPELIFG 196

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 175
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N +Y+ SRYYRAPE+I G
Sbjct: 176 GEPNVSYICSRYYRAPELIFG 196

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 124 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 180
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N +Y+ SRYYRAPE+I G
Sbjct: 181 GEPNVSYICSRYYRAPELIFG 201

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 132 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 188
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N +Y+ SRYYRAPE+I G
Sbjct: 189 GEPNVSYICSRYYRAPELIFG 209

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 147 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 203
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N +Y+ SRYYRAPE+I G
Sbjct: 204 GEPNVSYICSRYYRAPELIFG 224

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 157 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 213
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N +Y+ SRYYRAPE+I G
Sbjct: 214 GEPNVSYICSRYYRAPELIFG 234

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 153 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 209
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N +Y+ SRYYRAPE+I G
Sbjct: 210 GEPNVSYICSRYYRAPELIFG 230

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 198 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 254
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N +Y+ SRYYRAPE+I G
Sbjct: 255 GEPNVSYICSRYYRAPELIFG 275

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 155 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 211
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N +Y+ SRYYRAPE+I G
Sbjct: 212 GEPNVSYICSRYYRAPELIFG 232

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L DF+  +  + +PL  I+  L Q+            +H DLKPEN++    +  
Sbjct: 83  FLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLL----INT 138
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 139 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 177

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 141 IHRDLKPSNIV----VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A   S     T Y+ +RYYRAPE+ILG
Sbjct: 146 IHRDLKPSNIV----VKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILG 197

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 123 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 179
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N + + SRYYRAPE+I G
Sbjct: 180 GEPNVSXICSRYYRAPELIFG 200

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 141 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 142 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 142 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 149 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 120 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 176
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N + + SRYYRAPE+I G
Sbjct: 177 GEPNVSXICSRYYRAPELIFG 197

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 142 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 149 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 175
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N + + SRYYRAPE+I G
Sbjct: 176 GEPNVSXICSRYYRAPELIFG 196

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 175
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N + + SRYYRAPE+I G
Sbjct: 176 GEPNVSXICSRYYRAPELIFG 196

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 147 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 198

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 175
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N + + SRYYRAPE+I G
Sbjct: 176 GEPNVSXICSRYYRAPELIFG 196

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 149 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 131 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 187
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N + + SRYYRAPE+I G
Sbjct: 188 GEPNVSXICSRYYRAPELIFG 208

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 175
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N + + SRYYRAPE+I G
Sbjct: 176 GEPNVSXICSRYYRAPELIFG 196

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 153 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 204

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 131 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 187
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N + + SRYYRAPE+I G
Sbjct: 188 GEPNVSXICSRYYRAPELIFG 208

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 186 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 237

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 186 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 237

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 138 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 194
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N + + SRYYRAPE+I G
Sbjct: 195 GEPNVSXICSRYYRAPELIFG 215

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 127 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 183
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N + + SRYYRAPE+I G
Sbjct: 184 GEPNVSXICSRYYRAPELIFG 204

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 18  LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 77
           LP+ Y++  ++Q+             H D+KP+N++L DP      +K+ DFGSA  + +
Sbjct: 153 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVR 209
Query: 78  AVCN-TYLQSRYYRAPEIILG 97
              N + + SRYYRAPE+I G
Sbjct: 210 GEPNVSXICSRYYRAPELIFG 230

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKPEN++    +  
Sbjct: 84  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLL----INT 139
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 140 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 178

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKPEN++    +  
Sbjct: 85  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLL----INT 140
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 141 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 179

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 20/106 (18%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +L+  +  ++  PL L+++R  L+Q+            IH DLKP N++    V +
Sbjct: 140 LMESDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLL----VNE 193
Query: 61  PYRVKVIDFGSASHVSKAVCNT----------YLQSRYYRAPEIIL 96
              +K+ DFG A    + +C +          Y+ +R+YRAPE++L
Sbjct: 194 NCELKIGDFGMA----RGLCTSPAEHQYFMTEYVATRWYRAPELML 235

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++  +L + +K  K +     +++ +++Q+            IH DLKP N+     V +
Sbjct: 108 LMGADLNNIVKXQKLTD---DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNE 160
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 96
              +K++DFG A H    +   Y+ +R+YRAPEI+L
Sbjct: 161 DXELKILDFGLARHTDDEMTG-YVATRWYRAPEIML 195

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 180
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H +  +   Y+ +R+YRAPEI+L
Sbjct: 181 HTADEMTG-YVATRWYRAPEIML 202

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 180
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H +  +   Y+ +R+YRAPEI+L
Sbjct: 181 HTADEMTG-YVATRWYRAPEIML 202

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 20/106 (18%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +L+  +  ++  PL L+++R  L+Q+            IH DLKP N++    V +
Sbjct: 141 LMESDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLL----VNE 194
Query: 61  PYRVKVIDFGSASHVSKAVCNT----------YLQSRYYRAPEIIL 96
              +K+ DFG A    + +C +          Y+ +R+YRAPE++L
Sbjct: 195 NCELKIGDFGMA----RGLCTSPAEHQYFMTEYVATRWYRAPELML 236

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 180
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H +  +   Y+ +R+YRAPEI+L
Sbjct: 181 HTADEMTG-YVATRWYRAPEIML 202

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDXELKILDFGLAR 184
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 185 HTDDEMTG-YVATRWYRAPEIML 206

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++  +L + +K  K +     +++ +++Q+            IH DLKP N+     V +
Sbjct: 108 LMGADLNNIVKXQKLTD---DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNE 160
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 96
              +K++DFG A H    +   Y+ +R+YRAPEI+L
Sbjct: 161 DCELKILDFGLARHTDDEMTG-YVATRWYRAPEIML 195

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K + L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 114 KCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 169
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 170 HTDDEMTG-YVATRWYRAPEIML 191

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L  +L DF+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 85  FLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 140
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 141 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 179

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L  +L DF+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 86  FLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 141
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 142 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 180

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDXELKILDFGLAR 178
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 179 HTDDEMTG-YVATRWYRAPEIML 200

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDXELKILDFGLAR 178
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 179 HTDDEMTG-YVATRWYRAPEIML 200

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSA-SHVSKAVCNTYLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A +  +  +   Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILG 199

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDSELKILDFGLAR 179
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 180 HTDDEMTG-YVATRWYRAPEIML 201

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDSELKILDFGLAR 175
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 176 HTDDEMTG-YVATRWYRAPEIML 197

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 179
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 180 HTDDEMTG-YVATRWYRAPEIML 201

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 173
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 174 HTDDEMTG-YVATRWYRAPEIML 195

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 175
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 176 HTDDEMTG-YVATRWYRAPEIML 197

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 180
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 181 HTDDEMTG-YVATRWYRAPEIML 202

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 173
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 174 HTDDEMTG-YVATRWYRAPEIML 195

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 184
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 185 HTDDEMTG-YVATRWYRAPEIML 206

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 173
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 174 HTDDEMTG-YVATRWYRAPEIML 195

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 185
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 186 HTDDEMTG-YVATRWYRAPEIML 207

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 141 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 196
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 197 HTDDEMTG-YVATRWYRAPEIML 218

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 185
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 186 HTDDEMTG-YVATRWYRAPEIML 207

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 173
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 174 HTDDEMTG-YVATRWYRAPEIML 195

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 173
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 174 HTDDEMTG-YVATRWYRAPEIML 195

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 185
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 186 HTDDEMTG-YVATRWYRAPEIML 207

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 173
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 174 HTDDEMTG-YVATRWYRAPEIML 195

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 173
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 174 HTDDEMTG-YVATRWYRAPEIML 195

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 173
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 174 HTDDEMTG-YVATRWYRAPEIML 195

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 178
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 179 HTDDEMTG-YVATRWYRAPEIML 200

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 175
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 176 HTDDEMTG-YVATRWYRAPEIML 197

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 117 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 172
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 173 HTDDEMTG-YVATRWYRAPEIML 194

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 128 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 183
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 184 HTDDEMTG-YVATRWYRAPEIML 205

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 173
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 174 HTDDEMTG-YVATRWYRAPEIML 195

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 193
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 194 HTDDEMTG-YVATRWYRAPEIML 215

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 137 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 192
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 193 HTDDEMTG-YVATRWYRAPEIML 214

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 178
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 179 HTDDEMTG-YVATRWYRAPEIML 200

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 179
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 180 HTDDEMTG-YVATRWYRAPEIML 201

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 193
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 194 HTDDEMTG-YVATRWYRAPEIML 215

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 137 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 192
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 193 HTDDEMTG-YVATRWYRAPEIML 214

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 175
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 176 HTDDEMTG-YVATRWYRAPEIML 197

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 115 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 170
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 171 HTDDEMTG-YVATRWYRAPEIML 192

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 115 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 170
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 171 HTDDEMTG-YVATRWYRAPEIML 192

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 116 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 171
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 172 HTDDEMTG-YVATRWYRAPEIML 193

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 169
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 170 HTDDEMTG-YVATRWYRAPEIML 191

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 179
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 180 HTDDEMTG-YVATRWYRAPEIML 201

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 169
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 170 HTDDEMTG-YVATRWYRAPEIML 191

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 83  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 138
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 139 EGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 177

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 84  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 139
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 140 EGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 178

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 83  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 138
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 139 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 177

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 84  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 139
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 140 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 178

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 86  FLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 141
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 142 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 180

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 82  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 137
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 138 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 176

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 84  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 139
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 140 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 178

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 90  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 145
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 146 EGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 184

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 86  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 141
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 142 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 180

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 85  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 140
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 141 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 179

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 83  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 138
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 139 EGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 177

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 86  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 141
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 142 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 180

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 82  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 137
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 138 EGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 176

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 83  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 138
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 139 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 177

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 83  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 138
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 139 EGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 177

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 82  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 137
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 138 EGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 176

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 85  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 140
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 141 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 179

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 83  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 138
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 139 EGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 177

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 141 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 196
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 197 HTDDEMXG-YVATRWYRAPEIML 218

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 82  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 137
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 138 EGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 176

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 87  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 142
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 143 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 181

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 83  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 138
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 139 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 177

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 90  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 145
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 146 EGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 184

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 82  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 137
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 138 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 176

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 83  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 138
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 139 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 177

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 22/113 (19%)
Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDP------- 57
           +LY+ + +N ++   ++ I+    ++             H DLKPENI+L DP       
Sbjct: 121 SLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLI 180
Query: 58  -VR--------QPYR-----VKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 96
            VR        Q YR     +K+IDFG A+  S     + + +R YRAPE+IL
Sbjct: 181 TVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD-YHGSIINTRQYRAPEVIL 232

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 83  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLL----INT 138
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 139 EGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 177

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           KFS   ++Y+   ++Q+            +H DLKP N+     V +   +K++DFG A 
Sbjct: 122 KFSEEKIQYL---VYQMLKGLKYIHSAGVVHRDLKPGNL----AVNEDCELKILDFGLAR 174
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H + A    Y+ +R+YRAPE+IL
Sbjct: 175 H-ADAEMTGYVVTRWYRAPEVIL 196

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +  
Sbjct: 87  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INT 142
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 143 EGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 181

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 147 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 202
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 203 HTDDEMTG-YVATRWYRAPEIML 224

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 111 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 163
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIIL 96
              +K+ DFG A      H        Y+ +R+YRAPEI+L
Sbjct: 164 TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++  +L + +K  K +     +++ +++Q+            IH DLKP N+     V +
Sbjct: 108 LMGADLNNIVKSQKLTD---DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNE 160
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 96
              +K++DFG   H    +   Y+ +R+YRAPEI+L
Sbjct: 161 DSELKILDFGLCRHTDDEMTG-YVATRWYRAPEIML 195

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 111 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 163
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIIL 96
              +K+ DFG A      H        Y+ +R+YRAPEI+L
Sbjct: 164 TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 107 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 159
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIILG 97
              +K+ DFG A      H        Y+ +R+YRAPEI+L 
Sbjct: 160 TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L  +L  F+  +  + +PL  I+  L Q+            +H DLKPEN++    +  
Sbjct: 84  FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLL----INT 139
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 140 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 178

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 107 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 159
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIILG 97
              +K+ DFG A      H        Y+ +R+YRAPEI+L 
Sbjct: 160 TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQP 61
           ++Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +   
Sbjct: 87  VDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INTE 142
Query: 62  YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
             +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 143 GAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 180

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 109 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 161
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIIL 96
              +K+ DFG A      H        Y+ +R+YRAPEI+L
Sbjct: 162 TSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
            L  +L  F+  +  + +PL  I+  L Q+            +H DLKPEN++    +  
Sbjct: 86  FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLL----INT 141
Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
              +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 142 EGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 180

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 115 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 167
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIIL 96
              +K+ DFG A      H        Y+ +R+YRAPEI+L
Sbjct: 168 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 107 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 159
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIIL 96
              +K+ DFG A      H        Y+ +R+YRAPEI+L
Sbjct: 160 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 173
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   ++ +R+YRAPEI+L
Sbjct: 174 HTDDEMAG-FVATRWYRAPEIML 195

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 111 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 163
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIILG 97
              +K+ DFG A      H        Y+ +R+YRAPEI+L 
Sbjct: 164 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 112 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 164
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIIL 96
              +K+ DFG A      H        Y+ +R+YRAPEI+L
Sbjct: 165 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 113 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 165
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIIL 96
              +K+ DFG A      H        Y+ +R+YRAPEI+L
Sbjct: 166 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 104 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 156
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIIL 96
              +K+ DFG A      H        Y+ +R+YRAPEI+L
Sbjct: 157 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 111 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 163
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIIL 96
              +K+ DFG A      H        Y+ +R+YRAPEI+L
Sbjct: 164 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 105 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 157
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIILG 97
              +K+ DFG A      H        Y+ +R+YRAPEI+L 
Sbjct: 158 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 107 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 159
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIILG 97
              +K+ DFG A      H        Y+ +R+YRAPEI+L 
Sbjct: 160 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 107 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 159
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIILG 97
              +K+ DFG A      H        Y+ +R+YRAPEI+L 
Sbjct: 160 TXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 173
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   ++ +R+YRAPEI+L
Sbjct: 174 HTDDEMAG-FVATRWYRAPEIML 195

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 109 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 161
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIIL 96
              +K+ DFG A      H        Y+ +R+YRAPEI+L
Sbjct: 162 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 127 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 179
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIIL 96
              +K+ DFG A      H        Y+ +R+YRAPEI+L
Sbjct: 180 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 105 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 157
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIILG 97
              +K+ DFG A      H        Y+ +R+YRAPEI+L 
Sbjct: 158 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 109 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 161
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIIL 96
              +K+ DFG A      H        Y+ +R+YRAPEI+L
Sbjct: 162 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 96
           +H DLKP N+     V +   +K++DFG A H + A    Y+ +R+YRAPE+IL
Sbjct: 166 VHRDLKPGNL----AVNEDCELKILDFGLARH-ADAEMTGYVVTRWYRAPEVIL 214

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 169
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   ++ +R+YRAPEI+L
Sbjct: 170 HTDDEMAG-FVATRWYRAPEIML 191

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++D+G A 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDYGLAR 173
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 174 HTDDEMTG-YVATRWYRAPEIML 195

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQP 61
           + Q+L  F+  +  + +PL  I+  L Q+            +H DLKP+N++    +   
Sbjct: 83  VHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL----INTE 138
Query: 62  YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
             +K+ DFG A      V  TY     + +YRAPEI+LG
Sbjct: 139 GAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 176

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 7   YDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKV 66
           Y  LKQ     +P+  I+  ++Q+             H D+KP+N++L  P      +K+
Sbjct: 131 YAKLKQT----MPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGV---LKL 183
Query: 67  IDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 97
           IDFGSA  +     N + + SRYYRAPE+I G
Sbjct: 184 IDFGSAKILIAGEPNVSXICSRYYRAPELIFG 215

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 111 LMETDLYKLLKCQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 163
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIIL 96
              +K+ DFG A      H        Y+ +R+YRAPEI+L
Sbjct: 164 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +   T  + +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILG 199

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     +     ++ +RYYRAPE+ILG
Sbjct: 150 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILG 201

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 44  HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 97
           H D+KP N+++ +       +K+ DFGSA  +S +  N  Y+ SRYYRAPE+I G
Sbjct: 154 HRDIKPHNVLVNE---ADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFG 205

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 6/58 (10%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--KAVCNTYLQSRYYRAPEIILGE 98
           IH D+KPENI+    V Q   VK+ DFG A  ++    V +  + +R+YRAPE+++G+
Sbjct: 146 IHRDIKPENIL----VSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGD 199

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++ FG A 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILGFGLAR 173
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 174 HTDDEMTG-YVATRWYRAPEIML 195

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 173
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +    + +R+YRAPEI+L
Sbjct: 174 HTDDEMTGX-VATRWYRAPEIML 195

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++D G A 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDAGLAR 173
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 174 HTDDEMTG-YVATRWYRAPEIML 195

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L  ++++ +++Q+            IH DLKP N+     V +   ++++DFG A 
Sbjct: 124 KCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV----AVNEDSELRILDFGLAR 179
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
              + +   Y+ +R+YRAPEI+L
Sbjct: 180 QADEEMTG-YVATRWYRAPEIML 201

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L  ++++ +++Q+            IH DLKP N+     V +   ++++DFG A 
Sbjct: 124 KSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV----AVNEDSELRILDFGLAR 179
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
              + +   Y+ +R+YRAPEI+L
Sbjct: 180 QADEEMTG-YVATRWYRAPEIML 201

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++D G A 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDGGLAR 173
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 174 HTDDEMTG-YVATRWYRAPEIML 195

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++  +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 127 LMGADLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 179
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIIL 96
              +K+ DFG A      H        Y+ +R+YRAPEI+L
Sbjct: 180 TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     + +    + +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILG 199

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILG 97
           IH DLKP NI+    V+    +K++DFG A     + +    + +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILG 199

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK  + S   + Y    L+Q+            +H DLKP N++    +  
Sbjct: 127 LMETDLYKLLKSQQLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLL----INT 179
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIIL 96
              +K+ DFG A      H         + +R+YRAPEI+L
Sbjct: 180 TCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DFG A 
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLAR 193
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +    + +R+YRAPEI+L
Sbjct: 194 HTDDEMXGX-VATRWYRAPEIML 215

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 8   DFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVI 67
           D +K  K + L  ++I  I  ++            IH D+K +N++L +       VK++
Sbjct: 116 DLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA----EVKLV 171
Query: 68  DFGSASHVSKAVC--NTYLQSRYYRAPEII 95
           DFG ++ + + V   NT++ + Y+ APE+I
Sbjct: 172 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 201

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L  ++++ +++Q+            IH DLKP N+     V +   ++++DFG A 
Sbjct: 116 KCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV----AVNEDCELRILDFGLAR 171
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
              + +   Y+ +R+YRAPEI+L
Sbjct: 172 QADEEMTG-YVATRWYRAPEIML 193

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++D G A 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDRGLAR 173
Query: 74  HVSKAVCNTYLQSRYYRAPEIIL 96
           H    +   Y+ +R+YRAPEI+L
Sbjct: 174 HTDDEMTG-YVATRWYRAPEIML 195

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 14  KFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           K   L   +++ +++Q+            IH DLKP N+     V +   +K++DF  A 
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFYLAR 173
Query: 74  HVSKAVCNTYLQSRYYRAPEIILG 97
           H    +   Y+ +R+YRAPEI+L 
Sbjct: 174 HTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 111 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 163
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIIL 96
              +K+ DFG A      H         + +R+YRAPEI+L
Sbjct: 164 TCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 204

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           ++E +LY  LK    S   + Y    L+Q+            +H DLKP N++L      
Sbjct: 112 LMETDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLLL----NT 164
Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIIL 96
              +K+ DFG A      H         + +R+YRAPEI+L
Sbjct: 165 TCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 205

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 8   DFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVI 67
           D L+ +K  PL    I  + H              IH D+K  NI+L     +P  VK+ 
Sbjct: 142 DLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL----SEPGLVKLG 196
Query: 68  DFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           DFGSAS ++ A  N ++ + Y+ APE+IL 
Sbjct: 197 DFGSASIMAPA--NXFVGTPYWMAPEVILA 224

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 8   DFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVI 67
           D L+ +K  PL    I  + H              IH D+K  NI+L     +P  VK+ 
Sbjct: 103 DLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL----SEPGLVKLG 157
Query: 68  DFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           DFGSAS ++ A  N ++ + Y+ APE+IL 
Sbjct: 158 DFGSASIMAPA--NXFVGTPYWMAPEVILA 185

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 3   EQNLYDFLKQNKFSP-------LPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLV 55
           E +L+  +K ++ S        LP   ++ +L+Q+            +H DLKP NI+++
Sbjct: 103 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVM 162
Query: 56  DPVRQPYRVKVIDFGSASHVSK-----AVCNTYLQSRYYRAPEIILG 97
               +  RVK+ D G A   +      A  +  + + +YRAPE++LG
Sbjct: 163 GEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG 209

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 4   QNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYR 63
           Q+L+DF+ +     L  +  R    QV            +H D+K ENI L+D  R    
Sbjct: 95  QDLFDFITER--GALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENI-LIDLNRG--E 149
Query: 64  VKVIDFGSASHVSKAVCNTYLQSRYYRAPEII 95
           +K+IDFGS + +   V   +  +R Y  PE I
Sbjct: 150 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 181

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 4   QNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYR 63
           Q+L+DF+ +     L  +  R    QV            +H D+K ENI L+D  R    
Sbjct: 98  QDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRG--E 152
Query: 64  VKVIDFGSASHVSKAVCNTYLQSRYYRAPEII 95
           +K+IDFGS + +   V   +  +R Y  PE I
Sbjct: 153 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 184

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 4   QNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYR 63
           Q+L+DF+ +     L  +  R    QV            +H D+K ENI L+D  R    
Sbjct: 95  QDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRG--E 149
Query: 64  VKVIDFGSASHVSKAVCNTYLQSRYYRAPEII 95
           +K+IDFGS + +   V   +  +R Y  PE I
Sbjct: 150 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 181

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 4   QNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYR 63
           Q+L+DF+ +     L  +  R    QV            +H D+K ENI L+D  R    
Sbjct: 99  QDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRG--E 153
Query: 64  VKVIDFGSASHVSKAVCNTYLQSRYYRAPEII 95
           +K+IDFGS + +   V   +  +R Y  PE I
Sbjct: 154 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 185

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQP 61
           ++Q+L  +L +     +P + I+ ++ Q+            +H DLKP+NI+    V   
Sbjct: 101 VDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNIL----VTSS 156
Query: 62  YRVKVIDFGSASHVS-KAVCNTYLQSRYYRAPEIIL 96
            ++K+ DFG A   S +    + + + +YRAPE++L
Sbjct: 157 GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 4   QNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYR 63
           Q+L+DF+ +     L  +  R    QV            +H D+K ENI L+D  R    
Sbjct: 95  QDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRG--E 149
Query: 64  VKVIDFGSASHVSKAVCNTYLQSRYYRAPEII 95
           +K+IDFGS + +   V   +  +R Y  PE I
Sbjct: 150 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 181

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 4   QNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYR 63
           Q+L+DF+ +     L  +  R    QV            +H D+K ENI L+D  R    
Sbjct: 100 QDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRG--E 154
Query: 64  VKVIDFGSASHVSKAVCNTYLQSRYYRAPEII 95
           +K+IDFGS + +   V   +  +R Y  PE I
Sbjct: 155 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 186

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQP 61
           ++Q+L  +L +     +P + I+ ++ Q+            +H DLKP+NI+    V   
Sbjct: 101 VDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNIL----VTSS 156
Query: 62  YRVKVIDFGSASHVS-KAVCNTYLQSRYYRAPEIIL 96
            ++K+ DFG A   S +    + + + +YRAPE++L
Sbjct: 157 GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQP 61
           ++Q+L  +L +     +P + I+ ++ Q+            +H DLKP+NI+    V   
Sbjct: 101 VDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNIL----VTSS 156
Query: 62  YRVKVIDFGSASHVS-KAVCNTYLQSRYYRAPEIIL 96
            ++K+ DFG A   S +    + + + +YRAPE++L
Sbjct: 157 GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 26  ILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASH--VSKAVCNTY 83
           I+ QV            +H DLKPEN++L +   +   +++IDFG ++H   SK + +  
Sbjct: 154 IIRQVLSGITYMHKNKIVHRDLKPENLLL-ESKSKDANIRIIDFGLSTHFEASKKMKDK- 211
Query: 84  LQSRYYRAPEIILG 97
           + + YY APE++ G
Sbjct: 212 IGTAYYIAPEVLHG 225

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 26  ILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASH--VSKAVCNTY 83
           I+ QV            +H DLKPEN++L +   +   +++IDFG ++H   SK + +  
Sbjct: 155 IIRQVLSGITYMHKNKIVHRDLKPENLLL-ESKSKDANIRIIDFGLSTHFEASKKMKDK- 212
Query: 84  LQSRYYRAPEIILG 97
           + + YY APE++ G
Sbjct: 213 IGTAYYIAPEVLHG 226

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 4   QNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYR 63
           Q+L+DF+ +     L  +  R    QV            +H D+K ENI L+D  R    
Sbjct: 99  QDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRG--E 153
Query: 64  VKVIDFGSASHVSKAVCNTYLQSRYYRAPEII 95
           +K+IDFGS + +   V   +  +R Y  PE I
Sbjct: 154 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 185

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 26  ILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS-KAVCNTYL 84
           I+ QV            +H DLKPEN++L    R    +K++DFG ++H          L
Sbjct: 126 IMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDAL-IKIVDFGLSAHFEVGGKMKERL 184
Query: 85  QSRYYRAPEII 95
            + YY APE++
Sbjct: 185 GTAYYIAPEVL 195

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 26  ILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS-KAVCNTYL 84
           I+ QV            +H DLKPEN++L    R    +K++DFG ++H          L
Sbjct: 109 IMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDAL-IKIVDFGLSAHFEVGGKMKERL 167
Query: 85  QSRYYRAPEII 95
            + YY APE++
Sbjct: 168 GTAYYIAPEVL 178

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 4   QNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYR 63
           Q+L+DF+ +     L  +  R    QV            +H D+K ENI L+D  R    
Sbjct: 142 QDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRG--E 196
Query: 64  VKVIDFGSASHVSKAVCNTYLQSRYYRAPEII 95
           +K+IDFGS + +   V   +  +R Y  PE I
Sbjct: 197 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 228

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 26  ILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASH--VSKAVCNTY 83
           I+ QV            +H DLKPEN++L +   +   +++IDFG ++H   SK + +  
Sbjct: 131 IIRQVLSGITYMHKNKIVHRDLKPENLLL-ESKSKDANIRIIDFGLSTHFEASKKMKDK- 188
Query: 84  LQSRYYRAPEIILG 97
           + + YY APE++ G
Sbjct: 189 IGTAYYIAPEVLHG 202

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 30/119 (25%)
Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQP 61
           +E +L+  ++ N   P+  +Y+   ++Q+            +H D+KP NI+L       
Sbjct: 93  METDLHAVIRANILEPVHKQYV---VYQLIKVIKYLHSGGLLHRDMKPSNILL----NAE 145
Query: 62  YRVKVIDFG-SASHVS-KAVCNT---------------------YLQSRYYRAPEIILG 97
             VKV DFG S S V+ + V N                      Y+ +R+YRAPEI+LG
Sbjct: 146 CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG 204

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQP 61
           ++Q+L  +L +     LP + I+ ++ Q             +H DLKPENI+    V   
Sbjct: 93  VDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENIL----VTSG 148
Query: 62  YRVKVIDFGSASHVS-KAVCNTYLQSRYYRAPEIIL 96
             VK+ DFG A   S +   +  + + +YRAPE++L
Sbjct: 149 GTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLL 184

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 26  ILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ 85
           I+ QV            +H DLKPENI+L +   +   +K+IDFG ++   +   NT ++
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILL-ESKEKDCDIKIIDFGLSTCFQQ---NTKMK 181
Query: 86  SR----YYRAPEIILG 97
            R    YY APE++ G
Sbjct: 182 DRIGTAYYIAPEVLRG 197

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRV 64
            L+DFL Q +   L  +     + Q+             H DLKPENIML+D       +
Sbjct: 101 ELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 65  KVIDFGSASHVSKAV-CNTYLQSRYYRAPEII 95
           K+IDFG A  +   V       +  + APEI+
Sbjct: 159 KLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 26  ILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ 85
           I+ QV            +H DLKPENI+L +   +   +K+IDFG ++   +   NT ++
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILL-ESKEKDCDIKIIDFGLSTCFQQ---NTKMK 181
Query: 86  SR----YYRAPEIILG 97
            R    YY APE++ G
Sbjct: 182 DRIGTAYYIAPEVLRG 197

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 26  ILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ 85
           I+ QV            +H DLKPENI+L +   +   +K+IDFG ++   +   NT ++
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILL-ESKEKDCDIKIIDFGLSTCFQQ---NTKMK 181
Query: 86  SR----YYRAPEIILG 97
            R    YY APE++ G
Sbjct: 182 DRIGTAYYIAPEVLRG 197

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 23  IRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCN 81
           IR +L  +            IH DLKPENI+L  P  Q    K+ID G A  + +  +C 
Sbjct: 123 IRTLLSDISSALRYLHENRIIHRDLKPENIVL-QPGPQRLIHKIIDLGYAKELDQGELCT 181
Query: 82  TYLQSRYYRAPEII 95
            ++ +  Y APE++
Sbjct: 182 EFVGTLQYLAPELL 195

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 23  IRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCN 81
           IR +L  +            IH DLKPENI+L  P  Q    K+ID G A  + +  +C 
Sbjct: 124 IRTLLSDISSALRYLHENRIIHRDLKPENIVL-QPGPQRLIHKIIDLGYAKELDQGELCT 182
Query: 82  TYLQSRYYRAPEII 95
            ++ +  Y APE++
Sbjct: 183 EFVGTLQYLAPELL 196

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQP 61
           ++Q+L  +L +     LP + I+ ++ Q             +H DLKPENI+    V   
Sbjct: 101 VDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENIL----VTSG 156
Query: 62  YRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIIL 96
             VK+ DFG A   S  +  T  + + +YRAPE++L
Sbjct: 157 GTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLL 192

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL + +   L  +     L Q+             H DLKPENIML+D      R+K
Sbjct: 101 LFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 66  VIDFGSASHV 75
           +IDFG A  +
Sbjct: 159 IIDFGLAHKI 168

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL Q +   L  +     + Q+             H DLKPENIML+D       +K
Sbjct: 102 LFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 66  VIDFGSASHVSKAV-CNTYLQSRYYRAPEII 95
           +IDFG A  +   V       +  + APEI+
Sbjct: 160 LIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL Q +   L  +     + Q+             H DLKPENIML+D       +K
Sbjct: 102 LFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 66  VIDFGSASHVSKAV-CNTYLQSRYYRAPEII 95
           +IDFG A  +   V       +  + APEI+
Sbjct: 160 LIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 26  ILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYL 84
           I+ QV            +H DLKPEN++L +   +   +++IDFG ++H   +      +
Sbjct: 131 IIRQVLSGITYXHKNKIVHRDLKPENLLL-ESKSKDANIRIIDFGLSTHFEASKKXKDKI 189
Query: 85  QSRYYRAPEIILG 97
            + YY APE++ G
Sbjct: 190 GTAYYIAPEVLHG 202

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL Q +   L  +     + Q+             H DLKPENIML+D       +K
Sbjct: 102 LFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 66  VIDFGSASHVSKAV-CNTYLQSRYYRAPEII 95
           +IDFG A  +   V       +  + APEI+
Sbjct: 160 LIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL + +   L  +     L Q+             H DLKPENIML+D      R+K
Sbjct: 101 LFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 66  VIDFGSASHV 75
           +IDFG A  +
Sbjct: 159 IIDFGLAHKI 168

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL Q +   L  +     + Q+             H DLKPENIML+D       +K
Sbjct: 102 LFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 66  VIDFGSASHVSKAV-CNTYLQSRYYRAPEII 95
           +IDFG A  +   V       +  + APEI+
Sbjct: 160 LIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 26  ILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVKVIDFGSASH--VSKAVCNTY 83
           I+ QV            +H DLKPEN++L +   +   +++IDFG ++H   SK + +  
Sbjct: 137 IIRQVLSGITYMHKNKIVHRDLKPENLLL-ESKSKDANIRIIDFGLSTHFEASKKMKDK- 194
Query: 84  LQSRYYRAPEIILG 97
           + + YY APE++ G
Sbjct: 195 IGTAYYIAPEVLHG 208

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL Q +   L  +     + Q+             H DLKPENIML+D       +K
Sbjct: 102 LFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 66  VIDFGSASHVSKAV-CNTYLQSRYYRAPEII 95
           +IDFG A  +   V       +  + APEI+
Sbjct: 160 LIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL + +   L  +     L Q+             H DLKPENIML+D      R+K
Sbjct: 101 LFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 66  VIDFGSASHV 75
           +IDFG A  +
Sbjct: 159 IIDFGLAHKI 168

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL + +   L  +     L Q+             H DLKPENIML+D      R+K
Sbjct: 101 LFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 66  VIDFGSASHV 75
           +IDFG A  +
Sbjct: 159 IIDFGLAHKI 168

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL + +   L  +     L Q+             H DLKPENIML+D      R+K
Sbjct: 101 LFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 66  VIDFGSASHV 75
           +IDFG A  +
Sbjct: 159 IIDFGLAHKI 168

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL + +   L  +     L Q+             H DLKPENIML+D      R+K
Sbjct: 101 LFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 66  VIDFGSASHV 75
           +IDFG A  +
Sbjct: 159 IIDFGLAHKI 168

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL + +   L  +     L Q+             H DLKPENIML+D      R+K
Sbjct: 101 LFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 66  VIDFGSASHV 75
           +IDFG A  +
Sbjct: 159 IIDFGLAHKI 168

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL + +   L  +     L Q+             H DLKPENIML+D      R+K
Sbjct: 101 LFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 66  VIDFGSASHV 75
           +IDFG A  +
Sbjct: 159 IIDFGLAHKI 168

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL + +   L  +     L Q+             H DLKPENIML+D      R+K
Sbjct: 101 LFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 66  VIDFGSASHVSKAVCNTY---LQSRYYRAPEII 95
           +IDFG A  +     N +     +  + APEI+
Sbjct: 159 IIDFGLAHKID--FGNEFKNIFGTPEFVAPEIV 189

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL + +   L  +     L Q+             H DLKPENIML+D      R+K
Sbjct: 101 LFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 66  VIDFGSASHVSKAVCNTY---LQSRYYRAPEII 95
           +IDFG A  +     N +     +  + APEI+
Sbjct: 159 IIDFGLAHKID--FGNEFKNIFGTPEFVAPEIV 189

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL + +   L  +     L Q+             H DLKPENIML+D      R+K
Sbjct: 101 LFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 66  VIDFGSASHV 75
           +IDFG A  +
Sbjct: 159 IIDFGLAHKI 168

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL + +   L  +     L Q+             H DLKPENIML+D      R+K
Sbjct: 101 LFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 66  VIDFGSASHVSKAVCNTY---LQSRYYRAPEII 95
           +IDFG A  +     N +     +  + APEI+
Sbjct: 159 IIDFGLAHKID--FGNEFKNIFGTPEFVAPEIV 189

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQP 61
           ++Q+L  +L +     LP + I+ ++ Q             +H DLKPENI+    V   
Sbjct: 93  VDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENIL----VTSG 148
Query: 62  YRVKVIDFGSASHVS-KAVCNTYLQSRYYRAPEIIL 96
             VK+ DFG A   S +      + + +YRAPE++L
Sbjct: 149 GTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLL 184

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL + +   L  +     L Q+             H DLKPENIML+D      R+K
Sbjct: 100 LFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIK 157
Query: 66  VIDFGSASHVSKAVCNTY---LQSRYYRAPEII 95
           +IDFG A  +     N +     +  + APEI+
Sbjct: 158 IIDFGLAHKID--FGNEFKNIFGTPEFVAPEIV 188

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 37/56 (66%), Gaps = 5/56 (8%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILG 97
           IH D+K ENI++     + + +K+IDFGSA+++ +  +  T+  +  Y APE+++G
Sbjct: 152 IHRDIKDENIVIA----EDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMG 203

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL + +   L  +     L Q+             H DLKPENIML+D      R+K
Sbjct: 100 LFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIK 157
Query: 66  VIDFGSASHVSKAVCNTY---LQSRYYRAPEII 95
           +IDFG A  +     N +     +  + APEI+
Sbjct: 158 IIDFGLAHKID--FGNEFKNIFGTPEFVAPEIV 188

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL + +   L        L Q+             H DLKPENIML+D      R+K
Sbjct: 102 LFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIK 159
Query: 66  VIDFGSASHVSKA-VCNTYLQSRYYRAPEII 95
           +IDFG A  +           +  + APEI+
Sbjct: 160 LIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 190

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           +H D+KP NI+    V     +K+ DFG +  +  ++ N+++ +R Y APE + G
Sbjct: 137 MHRDVKPSNIL----VNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQG 187

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQ 60
           M +  L+D+L +     L  K  R I+  +            +H DLKPENI+L D +  
Sbjct: 93  MKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM-- 148
Query: 61  PYRVKVIDFGSASHVS-----KAVCNTYLQSRYYRAPEII 95
              +K+ DFG +  +      + VC T      Y APEII
Sbjct: 149 --NIKLTDFGFSCQLDPGEKLREVCGT----PSYLAPEII 182

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL + +   L        L Q+             H DLKPENIML+D      R+K
Sbjct: 116 LFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIK 173
Query: 66  VIDFGSASHVSKAVCNTY---LQSRYYRAPEII 95
           +IDFG A  +     N +     +  + APEI+
Sbjct: 174 LIDFGIAHKIEAG--NEFKNIFGTPEFVAPEIV 204

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQPYRVK 65
           L+DFL + +   L        L Q+             H DLKPENIML+D      R+K
Sbjct: 95  LFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIK 152
Query: 66  VIDFGSASHVSKA-VCNTYLQSRYYRAPEII 95
           +IDFG A  +           +  + APEI+
Sbjct: 153 LIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 183

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVXXXXXXXXXXXXIHADLKPENIMLVDPVRQP 61
           ++Q+L  +L +     LP + I+ ++ Q             +H DLKPENI+    V   
Sbjct: 93  VDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENIL----VTSG 148
Query: 62  YRVKVIDFGSASHVS-KAVCNTYLQSRYYRAPEIIL 96
             VK+ DFG A   S +      + + +YRAPE++L
Sbjct: 149 GTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLL 184

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-CNTYLQSRYYRAPEII 95
           +H D+KPENI+L +       +K++DFG +S  SK       L + YY APE++
Sbjct: 168 VHRDIKPENILLENK-NSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL 220

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           +H D+KP NI+    V     +K+ DFG +  +  ++ N+++ +R Y +PE + G
Sbjct: 154 MHRDVKPSNIL----VNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG 204

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	98
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	4e-45
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	1e-44
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	2e-44
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-44
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	5e-44
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	4e-38
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-21
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-19
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-19
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-18
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	5e-18
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	6e-18
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-17
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	8e-17
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	4e-16
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-15
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-15
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	3e-15
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	8e-15
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-14
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	8e-14
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-13
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-13
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-13
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-13
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-13
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-13
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-13
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-13
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-13
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-13
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-13
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	5e-13
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	6e-13
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	7e-13
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	8e-13
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	9e-13
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	9e-13
2a19_B	284	Interferon-induced, double-stranded RNA-activated	9e-13
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-12
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-12
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-12
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-12
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-12
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-12
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-12
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-12
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-12
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-12
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-12
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	3e-12
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	3e-12
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	4e-12
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-12
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-12
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	4e-12
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	4e-12
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	5e-12
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	6e-12
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	6e-12
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	6e-12
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	7e-12
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	8e-12
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-11
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-11
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-11
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-11
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-11
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-11
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-11
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-11
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-11
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-11
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-11
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-11
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-11
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-11
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	4e-11
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-11
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	4e-11
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	6e-11
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	7e-11
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	8e-11
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	8e-11
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-10
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-10
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-10
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-10
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-10
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-10
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-10
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-10
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	5e-10
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	6e-10
3an0_A	340	Dual specificity mitogen-activated protein kinase;	6e-10
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	6e-10
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	8e-10
3aln_A	327	Dual specificity mitogen-activated protein kinase;	8e-10
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-09
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-09
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-09
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-09
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-09
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-09
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-09
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-09
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	5e-09
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-09
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	6e-09
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	7e-09
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	8e-09
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	8e-09
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	8e-09
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	9e-09
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-08
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-08
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-08
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-08
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-08
3o0g_A	292	Cell division protein kinase 5; kinase activator c	3e-08
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-08
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-08
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-08
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-08
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	4e-08
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	4e-08
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	5e-08
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	5e-08
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	5e-08
3rp9_A	458	Mitogen-activated protein kinase; structural genom	6e-08
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	6e-08
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	7e-08
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	7e-08
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	8e-08
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	8e-08
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	8e-08
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-07
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-07
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-07
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-07
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-07
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	2e-07
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	2e-07
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-07
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	3e-07
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-07
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	4e-07
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-07
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	4e-07
3q4u_A	301	Activin receptor type-1; structural genomics conso	5e-07
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	5e-07
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	6e-07
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	7e-07
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	8e-07
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	9e-07
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-06
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-06
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-06
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-06
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-06
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	2e-06
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	3e-06
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	3e-06
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	4e-06
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	5e-06
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	5e-06
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	5e-06
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	6e-06
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	6e-06
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	7e-06
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	8e-06
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	8e-06
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	9e-06
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-05
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-05
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-05
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-05
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-05
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-05
3uqc_A	286	Probable conserved transmembrane protein; structur	3e-05
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	4e-05
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	5e-05
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	6e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	8e-05
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	8e-05
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	8e-05
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	9e-05
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	9e-05
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-04
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-04
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-04
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-04
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-04
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	2e-04
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-04
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-04
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-04
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	3e-04
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	5e-04
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	5e-04
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	5e-04
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	5e-04
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	6e-04
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	6e-04
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	7e-04
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	9e-04

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  149 bits (377), Expect = 4e-45
 Identities = 46/97 (47%), Positives = 62/97 (63%), Gaps = 3/97 (3%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           +L  NLY+ +K+NKF    L  +R   H +L  L  L +  +IH DLKPENI+L    R 
Sbjct: 180 LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRS 239

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
              +KVIDFGS+ +  + V  TY+QSR+YRAPE+ILG
Sbjct: 240 G--IKVIDFGSSCYEHQRVY-TYIQSRFYRAPEVILG 273

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  145 bits (369), Expect = 1e-44
 Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 16/112 (14%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDP--- 57
           +L  + YDF+K+N F P  L +IR + +Q+  ++  L    L H DLKPENI+ V     
Sbjct: 98  LLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYT 157

Query: 58  ------------VRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
                             +KV+DFGSA++  +   +T + +R+YRAPE+IL 
Sbjct: 158 EAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH-STLVSTRHYRAPEVILA 208

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  145 bits (368), Expect = 2e-44
 Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 16/112 (14%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           +L +N ++FLK+N F P PL ++R + +Q+  AL  L +  L H DLKPENI+ V+   +
Sbjct: 103 LLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFE 162

Query: 61  PY---------------RVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
                             ++V DFGSA+   +    T + +R+YR PE+IL 
Sbjct: 163 TLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHT-TIVATRHYRPPEVILE 213

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  145 bits (367), Expect = 3e-44
 Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 22/118 (18%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
            L  +LY+ + +N ++   ++ I+    ++L AL  L+++ L H DLKPENI+L DP  +
Sbjct: 117 PLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFE 176

Query: 61  PY---------------------RVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
                                   +K+IDFG A+  S     + + +R YRAPE+IL 
Sbjct: 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG-SIINTRQYRAPEVILN 233

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  145 bits (367), Expect = 5e-44
 Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 5/99 (5%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTAL--LKLKQLGLIHADLKPENIMLVDPV 58
           ML  NLYD L+   F  + L   R    Q+ TAL  L   +L +IH DLKPENI+L +P 
Sbjct: 137 MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPK 196

Query: 59  RQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           R    +K++DFGS+  + + +   Y+QSR+YR+PE++LG
Sbjct: 197 RSA--IKIVDFGSSCQLGQRIY-QYIQSRFYRSPEVLLG 232

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  129 bits (327), Expect = 4e-38
 Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 4/100 (4%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKL-KQLGLIHADLKPENIMLVDPVR 59
           +L +NL   +K+ +   +PL Y++ I  Q+L  L  + ++ G+IH D+KPEN+++     
Sbjct: 111 VLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDS 170

Query: 60  Q--PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
                ++K+ D G+A    +      +Q+R YR+PE++LG
Sbjct: 171 PENLIQIKIADLGNACWYDEHYT-NSIQTREYRSPEVLLG 209

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 85.9 bits (213), Expect = 2e-21
 Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 6/99 (6%)

Query: 2   LEQNLYDFLKQNKFS--PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR 59
           + + +Y   +    +   LP+ Y++  ++Q+  +L  +   G+ H D+KP+N+ L+DP  
Sbjct: 135 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL-LLDP-- 191

Query: 60  QPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
               +K+ DFGSA  + +   N  Y+ SRYYRAPE+I G
Sbjct: 192 DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 230

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 80.5 bits (199), Expect = 1e-19
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 6/99 (6%)

Query: 2   LEQNLYDFLKQNKFS--PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR 59
           + + +Y   +        +P+  I+  ++Q+L +L  +  +G+ H D+KP+N+ L+DP  
Sbjct: 120 VPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNL-LLDP-- 176

Query: 60  QPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
               +K+IDFGSA  +     N  Y+ SRYYRAPE+I G
Sbjct: 177 PSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFG 215

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 79.4 bits (196), Expect = 3e-19
 Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 6/99 (6%)

Query: 2   LEQNLYDFLKQNKFS--PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR 59
           +   L+  LK    S   +P+  I   ++Q+  A+  +  LG+ H D+KP+N+ LV+   
Sbjct: 120 VPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNL-LVNS-- 176

Query: 60  QPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
           +   +K+ DFGSA  +  +  +  Y+ SR+YRAPE++LG
Sbjct: 177 KDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLG 215

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 76.2 bits (188), Expect = 3e-18
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 11/97 (11%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L  +LK+ K   +     +     +L A+  + Q G++H+DLKP N ++VD       +K
Sbjct: 114 LNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-----MLK 166

Query: 66  VIDFGSASHVSKAVCNTYLQSR----YYRAPEIILGE 98
           +IDFG A+ +     +    S+     Y  PE I   
Sbjct: 167 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 203

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 75.5 bits (186), Expect = 5e-18
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 11/96 (11%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L  +LK+ K   +     +     +L A+  + Q G++H+DLKP N ++VD       +K
Sbjct: 95  LNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-----MLK 147

Query: 66  VIDFGSASHVSKAVCNTYLQSR----YYRAPEIILG 97
           +IDFG A+ +     +    S+     Y  PE I  
Sbjct: 148 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 75.8 bits (187), Expect = 6e-18
 Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 8/101 (7%)

Query: 2   LEQNLYDFLKQNKFS--PLPLKYIRPILHQVLTAL--LKLKQLGLIHADLKPENIMLVDP 57
           +   L+   +         P   I+  L Q++ ++  L L  + + H D+KP N+ LV+ 
Sbjct: 108 VPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNV-LVNE 166

Query: 58  VRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
                 +K+ DFGSA  +S +  N  Y+ SRYYRAPE+I G
Sbjct: 167 --ADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFG 205

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 75.2 bits (185), Expect = 1e-17
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 11/97 (11%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L  +LK+ K   +     +     +L A+  + Q G++H+DLKP N ++VD       +K
Sbjct: 142 LNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-----MLK 194

Query: 66  VIDFGSASHVSKAVCNTYLQSR----YYRAPEIILGE 98
           +IDFG A+ +     +    S+     Y  PE I   
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDM 231

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 72.1 bits (177), Expect = 8e-17
 Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 2/95 (2%)

Query: 6   LYDFLKQN-KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           LY  L++      LP      +L  V+  +  L++ G++H ++KP NIM V         
Sbjct: 96  LYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVY 155

Query: 65  KVIDFGSASHVSK-AVCNTYLQSRYYRAPEIILGE 98
           K+ DFG+A  +       +   +  Y  P++    
Sbjct: 156 KLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERA 190

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 71.0 bits (174), Expect = 4e-16
 Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 2/94 (2%)

Query: 6   LYDFLKQN-KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           LY  L++      LP      +L  V+  +  L++ G++H ++KP NIM V         
Sbjct: 96  LYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVY 155

Query: 65  KVIDFGSASHVSK-AVCNTYLQSRYYRAPEIILG 97
           K+ DFG+A  +       +   +  Y  P++   
Sbjct: 156 KLTDFGAARELEDDEQFVSLYGTEEYLHPDMYER 189

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 69.6 bits (170), Expect = 1e-15
 Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 47/143 (32%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKL-KQLGLIHADLKPENIMLVDP-- 57
           +L  +L  ++ ++ +  LPL  ++ I+ QVL  L  L  +  +IH D+KPENI+L     
Sbjct: 126 VLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQ 185

Query: 58  -------------------------------------------VRQPYRVKVIDFGSASH 74
                                                        +  +VK+ D G+A  
Sbjct: 186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACW 245

Query: 75  VSKAVCNTYLQSRYYRAPEIILG 97
           V K      +Q+R YR+ E+++G
Sbjct: 246 VHKHF-TEDIQTRQYRSLEVLIG 267

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 68.3 bits (167), Expect = 3e-15
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 7/89 (7%)

Query: 10  LKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF 69
           LK++K   LP+      L ++L AL  L  +GL++ DLKPENIML        ++K+ID 
Sbjct: 171 LKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML-----TEEQLKLIDL 225

Query: 70  GSASHVSKAVCNTYLQSRYYRAPEIILGE 98
           G+ S ++         +  ++APEI+   
Sbjct: 226 GAVSRINSF--GYLYGTPGFQAPEIVRTG 252

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 68.6 bits (167), Expect = 3e-15
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 3/95 (3%)

Query: 6   LYDFLKQN-KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           L  +L Q      L    IR +L  + +AL  L +  +IH DLKPENI+L  P  Q    
Sbjct: 105 LRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL-QPGPQRLIH 163

Query: 65  KVIDFG-SASHVSKAVCNTYLQSRYYRAPEIILGE 98
           K+ID G +       +C  ++ +  Y APE++  +
Sbjct: 164 KIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQK 198

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 66.9 bits (163), Expect = 8e-15
 Identities = 16/106 (15%), Positives = 41/106 (38%), Gaps = 11/106 (10%)

Query: 4   QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
            N  +  K      +P   +     ++L  + ++    +IH D+KP+N +L +   +   
Sbjct: 155 LNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDD 214

Query: 64  -------VKVIDFGSASHVSKAVCNTYLQSR----YYRAPEIILGE 98
                  + +ID G +  +      T   ++     ++  E++  +
Sbjct: 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNK 260

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 65.6 bits (160), Expect = 3e-14
 Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 7/99 (7%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ-PYRV 64
           L ++++Q  F+         +L Q  + L  L  L ++H DLKP NI++  P      + 
Sbjct: 104 LQEYVEQKDFA-HLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKA 162

Query: 65  KVIDFGSASHV-----SKAVCNTYLQSRYYRAPEIILGE 98
            + DFG    +     S +  +    +  + APE++  +
Sbjct: 163 MISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSED 201

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 64.1 bits (156), Expect = 8e-14
 Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 7/94 (7%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRV 64
           L   LK+     +P + +  +   V+  L  L+ +  ++H D+KP NI LV+   +   +
Sbjct: 118 LDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI-LVNSRGE---I 171

Query: 65  KVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
           K+ DFG +  +  ++ N+++ +R Y +PE + G 
Sbjct: 172 KLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 205

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 64.1 bits (156), Expect = 1e-13
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 21  KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V 79
                 + QV   L  + +   +H DLKPENIM     ++   +K+IDFG  +H+     
Sbjct: 255 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT--KRSNELKLIDFGLTAHLDPKQS 312

Query: 80  CNTYLQSRYYRAPEIILGE 98
                 +  + APE+  G+
Sbjct: 313 VKVTTGTAEFAAPEVAEGK 331

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 63.5 bits (155), Expect = 1e-13
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 5/95 (5%)

Query: 4   QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
           Q+L+DF+ +     L  +  R    QVL A+      G++H D+K ENI L+D  R    
Sbjct: 134 QDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRG--E 188

Query: 64  VKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
           +K+IDFGS + +   V   +  +R Y  PE I   
Sbjct: 189 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 223

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 63.5 bits (155), Expect = 1e-13
 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYL 84
            + Q+L  +  L    + H DLKPENIML+D       +K+IDFG A  +          
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179

Query: 85  QSRYYRAPEIILGE 98
            +  + APEI+  E
Sbjct: 180 GTPEFVAPEIVNYE 193

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 63.2 bits (154), Expect = 2e-13
 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 6/96 (6%)

Query: 5   NLYD-FLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
            L++  + ++KF          I+ Q+L+ +  L +  ++H D+KPENI+L +       
Sbjct: 132 ELFEQIINRHKFDE---CDAANIMKQILSGICYLHKHNIVHRDIKPENILLENK-NSLLN 187

Query: 64  VKVIDFGSASHVSK-AVCNTYLQSRYYRAPEIILGE 98
           +K++DFG +S  SK       L + YY APE++  +
Sbjct: 188 IKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKK 223

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 63.3 bits (154), Expect = 2e-13
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)

Query: 21  KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-- 78
           K I  I+ Q+ +AL  L   G+ H D+KPEN +      + + +K++DFG +    K   
Sbjct: 168 KLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN--KSFEIKLVDFGLSKEFYKLNN 225

Query: 79  ----VCNTYLQSRYYRAPEIILGE 98
                  T   + Y+ APE++   
Sbjct: 226 GEYYGMTTKAGTPYFVAPEVLNTT 249

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 63.0 bits (154), Expect = 2e-13
 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYL 84
            + Q+L  +  L    + H DLKPENIML+D       +K+IDFG A  +          
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179

Query: 85  QSRYYRAPEIILGE 98
            +  + APEI+  E
Sbjct: 180 GTPEFVAPEIVNYE 193

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYL 84
            L Q+L  +  L    + H DLKPENIML+D      R+K+IDFG A  +          
Sbjct: 113 FLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF 172

Query: 85  QSRYYRAPEIILGE 98
            +  + APEI+  E
Sbjct: 173 GTPEFVAPEIVNYE 186

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 62.3 bits (152), Expect = 3e-13
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 1/74 (1%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYL 84
            L Q+L  +  L  L + H DLKPENIML+D      R+K+IDFG A  +          
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178

Query: 85  QSRYYRAPEIILGE 98
            +  + APEI+  E
Sbjct: 179 GTPEFVAPEIVNYE 192

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 62.4 bits (152), Expect = 3e-13
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 17/104 (16%)

Query: 5   NLYDFLKQ--NKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY 62
            L++ +++  +K + L    I  +L  +   L  +   G  H DLKP NI+L D      
Sbjct: 116 TLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGD----EG 171

Query: 63  RVKVIDFGSASHVSKAVCNTYLQSR-----------YYRAPEII 95
           +  ++D GS +     V  +                 YRAPE+ 
Sbjct: 172 QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELF 215

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 62.4 bits (152), Expect = 4e-13
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 21  KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-AV 79
                I+ QVL+ +  + +  ++H DLKPEN++L     +   +++IDFG ++H      
Sbjct: 126 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESK-SKDANIRIIDFGLSTHFEASKK 184

Query: 80  CNTYLQSRYYRAPEIILG 97
               + + YY APE++ G
Sbjct: 185 MKDKIGTAYYIAPEVLHG 202

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 62.0 bits (151), Expect = 5e-13
 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)

Query: 21  KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V 79
                I+ QVL+ +  L +  ++H DLKPEN++L     +   +K++DFG ++       
Sbjct: 136 VDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESK-EKDALIKIVDFGLSAVFENQKK 194

Query: 80  CNTYLQSRYYRAPEIILG 97
               L + YY APE++  
Sbjct: 195 MKERLGTAYYIAPEVLRK 212

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 62.1 bits (151), Expect = 5e-13
 Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 20/113 (17%)

Query: 6   LYDFLKQNKFSPLPLKY-----IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDP--- 57
           L D ++    S   LK         +L Q+ + +  L  L +IH DLKP+NI++      
Sbjct: 95  LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRF 154

Query: 58  ------VRQPYRVKVIDFGSASHVS------KAVCNTYLQSRYYRAPEIILGE 98
                   +  R+ + DFG    +       +   N    +  +RAPE++   
Sbjct: 155 TADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEES 207

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 61.6 bits (150), Expect = 6e-13
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 5/93 (5%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L+D++ +    PL     R    QV+ A+      G++H D+K ENI L+D  R     K
Sbjct: 126 LFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENI-LIDLRRG--CAK 180

Query: 66  VIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
           +IDFGS + +       +  +R Y  PE I   
Sbjct: 181 LIDFGSGALLHDEPYTDFDGTRVYSPPEWISRH 213

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 61.6 bits (150), Expect = 7e-13
 Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 9/97 (9%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           ++ NL   ++      L  + +  +L+Q+L  +  L   G+IH DLKP NI+    V+  
Sbjct: 112 MDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV----VKSD 163

Query: 62  YRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
             +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 164 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 61.4 bits (149), Expect = 8e-13
 Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 9/97 (9%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           ++ NL   ++      L  + +  +L+Q+L  +  L   G+IH DLKP NI+    V+  
Sbjct: 149 MDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV----VKSD 200

Query: 62  YRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
             +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 201 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 237

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 61.2 bits (149), Expect = 9e-13
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)

Query: 21  KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-AV 79
                I+ QV + +  + +  ++H DLKPENI+L     +   +K+IDFG ++   +   
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK-EKDCDIKIIDFGLSTCFQQNTK 179

Query: 80  CNTYLQSRYYRAPEIILG 97
               + + YY APE++ G
Sbjct: 180 MKDRIGTAYYIAPEVLRG 197

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 61.3 bits (149), Expect = 9e-13
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)

Query: 21  KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V 79
             +   + Q    L  + +  ++H D+KPENIM     ++   VK+IDFG A+ ++   +
Sbjct: 149 AEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET--KKASSVKIIDFGLATKLNPDEI 206

Query: 80  CNTYLQSRYYRAPEIILGE 98
                 +  + APEI+  E
Sbjct: 207 VKVTTATAEFAAPEIVDRE 225

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 60.8 bits (148), Expect = 9e-13
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 13/98 (13%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L  ++++ +   L       +  Q+   +  +    LI+ DLKP NI LVD      +VK
Sbjct: 107 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD----TKQVK 162

Query: 66  VIDFGSASHVSKAVCNTYLQSR-----YYRAPEIILGE 98
           + DFG    +  ++ N   ++R      Y +PE I  +
Sbjct: 163 IGDFG----LVTSLKNDGKRTRSKGTLRYMSPEQISSQ 196

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 60.8 bits (148), Expect = 1e-12
 Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 6/94 (6%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L    +    + LP   +   L   L AL  L   GL+H D+KP NI  + P     R 
Sbjct: 142 SLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANI-FLGPRG---RC 196

Query: 65  KVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILG 97
           K+ DFG    +  A           Y APE++ G
Sbjct: 197 KLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG 230

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 61.2 bits (149), Expect = 1e-12
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 4/94 (4%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L+D +  NK   L     +   +Q+L A+  L + G+IH DLKPEN++L     +   +K
Sbjct: 226 LFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ-EEDCLIK 282

Query: 66  VIDFGSASHVSK-AVCNTYLQSRYYRAPEIILGE 98
           + DFG +  + + ++  T   +  Y APE+++  
Sbjct: 283 ITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSV 316

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 60.9 bits (148), Expect = 1e-12
 Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)

Query: 21  KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V 79
                 + Q+   +  + Q+ ++H DLKPENI+ V+  R   ++K+IDFG A        
Sbjct: 187 LDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN--RDAKQIKIIDFGLARRYKPREK 244

Query: 80  CNTYLQSRYYRAPEIILGE 98
                 +  + APE++  +
Sbjct: 245 LKVNFGTPEFLAPEVVNYD 263

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 60.8 bits (148), Expect = 1e-12
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 3/75 (4%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--AVCNTY 83
            + Q+L AL       +IH D+KP  ++L         VK+  FG A  + +   V    
Sbjct: 135 YMRQILEALRYCHDNNIIHRDVKPHCVLLASK-ENSAPVKLGGFGVAIQLGESGLVAGGR 193

Query: 84  LQSRYYRAPEIILGE 98
           + + ++ APE++  E
Sbjct: 194 VGTPHFMAPEVVKRE 208

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 60.4 bits (147), Expect = 1e-12
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ 85
           I+  + TA+  L    + H D+KPEN++      +   +K+ DFG A   ++    T   
Sbjct: 133 IMRDIGTAIQFLHSHNIAHRDVKPENLLYTSK-EKDAVLKLTDFGFAKETTQNALQTPCY 191

Query: 86  SRYYRAPEIILGE 98
           + YY APE++  E
Sbjct: 192 TPYYVAPEVLGPE 204

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 60.4 bits (147), Expect = 2e-12
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 6/79 (7%)

Query: 24  RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTY 83
             +L  +   +  L   G++H DLKP NI+ VD    P  +++ DFG A  +     N  
Sbjct: 119 SAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA--ENGL 176

Query: 84  LQ----SRYYRAPEIILGE 98
           L     +  + APE++  +
Sbjct: 177 LMTPCYTANFVAPEVLERQ 195

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 59.9 bits (146), Expect = 2e-12
 Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ 85
           ++ QVL+A+  L + G++H DLKPEN++ + P     ++ + DFG +      + +T   
Sbjct: 111 VIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENS-KIMITDFGLSKMEQNGIMSTACG 169

Query: 86  SRYYRAPEIILGE 98
           +  Y APE++  +
Sbjct: 170 TPGYVAPEVLAQK 182

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 60.0 bits (146), Expect = 2e-12
 Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 2/94 (2%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           ++          +    +  ++ Q+L  +  L Q  ++H DLKP+NI+L         +K
Sbjct: 116 IFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLG-DIK 174

Query: 66  VIDFGSASHVSKA-VCNTYLQSRYYRAPEIILGE 98
           ++DFG +  +  A      + +  Y APEI+  +
Sbjct: 175 IVDFGMSRKIGHACELREIMGTPEYLAPEILNYD 208

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 59.9 bits (146), Expect = 2e-12
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYL 84
            +HQV  AL  L    + H D++PENI+     R+   +K+I+FG A  +          
Sbjct: 107 YVHQVCEALQFLHSHNIGHFDIRPENIIYQT--RRSSTIKIIEFGQARQLKPGDNFRLLF 164

Query: 85  QSRYYRAPEIILGE 98
            +  Y APE+   +
Sbjct: 165 TAPEYYAPEVHQHD 178

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 60.0 bits (146), Expect = 2e-12
 Identities = 23/101 (22%), Positives = 48/101 (47%), Gaps = 11/101 (10%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           +E +L + L+Q        +     ++Q+L  L  +    ++H DLKP N+  ++   + 
Sbjct: 104 METDLANVLEQGPLLEEHARLF---MYQLLRGLKYIHSANVLHRDLKPANL-FIN--TED 157

Query: 62  YRVKVIDFGSASHVSKAVCNT-----YLQSRYYRAPEIILG 97
             +K+ DFG A  +     +       L +++YR+P ++L 
Sbjct: 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLS 198

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 59.6 bits (145), Expect = 3e-12
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)

Query: 21  KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V 79
                I+ QV + +  + +  ++H DLKPENI+L     +   +K+IDFG ++   +   
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK-EKDCDIKIIDFGLSTCFQQNTK 179

Query: 80  CNTYLQSRYYRAPEIILG 97
               + + YY APE++ G
Sbjct: 180 MKDRIGTAYYIAPEVLRG 197

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 59.5 bits (145), Expect = 3e-12
 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)

Query: 21  KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V 79
                I+  VL+A+    +L + H DLKPEN + +        +K+IDFG A+      +
Sbjct: 106 SDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD-SPDSPLKLIDFGLAARFKPGKM 164

Query: 80  CNTYLQSRYYRAPEIILG 97
             T + + YY +P+++ G
Sbjct: 165 MRTKVGTPYYVSPQVLEG 182

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 59.7 bits (145), Expect = 3e-12
 Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 8/96 (8%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           +  +L + +K  K +   ++++   ++Q+L  L  +    +IH DLKP N+     V + 
Sbjct: 116 MGADLNNIVKCQKLTDDHVQFL---IYQILRGLKYIHSADIIHRDLKPSNLA----VNED 168

Query: 62  YRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
             +K++DFG A H +  +   Y+ +R+YRAPEI+L 
Sbjct: 169 CELKILDFGLARHTADEMTG-YVATRWYRAPEIMLN 203

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 59.6 bits (145), Expect = 4e-12
 Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA-SHV 75
            L    IR  ++++L AL     +G++H D+KP N+M+    R+   +++ID+G A  + 
Sbjct: 126 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK---LRLIDWGLAEFYH 182

Query: 76  SKAVCNTYLQSRYYRAPEIILG 97
                N  + SRY++ PE+++ 
Sbjct: 183 PGQEYNVRVASRYFKGPELLVD 204

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 59.7 bits (144), Expect = 4e-12
 Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 5/83 (6%)

Query: 16  SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV 75
               +  +  +  Q++     L+  GL+H    P+N+ +        R+ + D  +   V
Sbjct: 189 GDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFI----MPDGRLMLGDVSALWKV 244

Query: 76  SKAVCNTYLQSRYYRAPEIILGE 98
                        Y   E +   
Sbjct: 245 G-TRGPASSVPVTYAPREFLNAS 266

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 59.3 bits (144), Expect = 4e-12
 Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 6/96 (6%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L+  +   K        I     Q+  AL  +    ++H D+K +NI L     +   V
Sbjct: 109 DLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL----TKDGTV 164

Query: 65  KVIDFGSASHVS--KAVCNTYLQSRYYRAPEIILGE 98
           ++ DFG A  ++    +    + + YY +PEI   +
Sbjct: 165 QLGDFGIARVLNSTVELARACIGTPYYLSPEICENK 200

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 59.4 bits (144), Expect = 4e-12
 Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 12/100 (12%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L   +K  +   LP       L Q L  L  L    ++H D+K +N+ L+       R  
Sbjct: 137 LGQLIK--QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV-LLSS--DGSRAA 191

Query: 66  VIDFGSASHVSKAVCNTYLQSR-------YYRAPEIILGE 98
           + DFG A  +        L +         + APE+++G+
Sbjct: 192 LCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 59.2 bits (144), Expect = 4e-12
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 21  KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V 79
            Y+  ++ Q++ AL       ++H DLKPENI+  D       +K+IDFG A        
Sbjct: 124 GYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDT-SPHSPIKIIDFGLAELFKSDEH 182

Query: 80  CNTYLQSRYYRAPEIILGE 98
                 +  Y APE+   +
Sbjct: 183 STNAAGTALYMAPEVFKRD 201

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 58.7 bits (143), Expect = 5e-12
 Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 2/76 (2%)

Query: 24  RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNT 82
              + Q+L ++      G++H +LKPEN++L     +   VK+ DFG A  V+ +   + 
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASK-AKGAAVKLADFGLAIEVNDSEAWHG 166

Query: 83  YLQSRYYRAPEIILGE 98
           +  +  Y +PE++  +
Sbjct: 167 FAGTPGYLSPEVLKKD 182

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 58.9 bits (143), Expect = 6e-12
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           +  +L   +K  K     ++++   ++Q+L  L  +   G+IH DLKP N+     V + 
Sbjct: 112 MGTDLGKLMKHEKLGEDRIQFL---VYQMLKGLRYIHAAGIIHRDLKPGNLA----VNED 164

Query: 62  YRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
             +K++DFG A      +   Y+ +R+YRAPE+IL 
Sbjct: 165 CELKILDFGLARQADSEMTG-YVVTRWYRAPEVILN 199

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 58.8 bits (143), Expect = 6e-12
 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 9/96 (9%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           ++ +L   +          + I+ +++Q+L  L  +   G++H DLKP N+     V + 
Sbjct: 111 MQTDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLA----VNED 162

Query: 62  YRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
             +K++DFG A H    +   Y+ +R+YRAPE+IL 
Sbjct: 163 CELKILDFGLARHADAEMTG-YVVTRWYRAPEVILS 197

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 58.9 bits (143), Expect = 6e-12
 Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYL 84
            + Q+L ++      G++H +LKPEN++L     +   VK+ DFG A  V+ +   + + 
Sbjct: 133 CIQQILESIAYCHSNGIVHRNLKPENLLLASK-AKGAAVKLADFGLAIEVNDSEAWHGFA 191

Query: 85  QSRYYRAPEIILGE 98
            +  Y +PE++  +
Sbjct: 192 GTPGYLSPEVLKKD 205

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 58.5 bits (142), Expect = 7e-12
 Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           +  +L   +   +   +  ++I+  ++ +L  L  L + G++H DL P NI+    +   
Sbjct: 116 MRTDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNIL----LADN 170

Query: 62  YRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
             + + DF  A   +     T Y+  R+YRAPE+++ 
Sbjct: 171 NDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQ 207

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 58.5 bits (141), Expect = 8e-12
 Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 8/93 (8%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L      +K   L       +  QV+  L  L   GL+H  L+P +I ++D   Q   V 
Sbjct: 193 LLSHSSTHK--SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDI-VLD---QRGGVF 246

Query: 66  VIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
           +  F         V      SR +  PE+    
Sbjct: 247 LTGFEHLVRDGARV--VSSVSRGFEPPELEARR 277

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 58.2 bits (141), Expect = 1e-11
 Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 6/95 (6%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           + D +K  K + L  ++I  I  ++L  L  L Q  +IH D+K +N++L +       VK
Sbjct: 114 VTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA----EVK 169

Query: 66  VIDFGSASHVSKAVC--NTYLQSRYYRAPEIILGE 98
           ++DFG ++ + + V   NT++ + Y+ APE+I  +
Sbjct: 170 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 204

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 58.1 bits (141), Expect = 1e-11
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 12/101 (11%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           +E +LY  LK    S   + Y    L+Q+L  L  +    ++H DLKP N++    +   
Sbjct: 112 METDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLL----LNTT 164

Query: 62  YRVKVIDFGSASHVSKAVCNT-----YLQSRYYRAPEIILG 97
             +K+ DFG A        +T     Y+ +R+YRAPEI+L 
Sbjct: 165 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 58.1 bits (141), Expect = 1e-11
 Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)

Query: 24  RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNT 82
           +   +Q+L A+  L + G+IH DLKPEN++L     +   +K+ DFG +  + +  +  T
Sbjct: 117 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ-EEDCLIKITDFGHSKILGETSLMRT 175

Query: 83  YLQSRYYRAPEIILGE 98
              +  Y APE+++  
Sbjct: 176 LCGTPTYLAPEVLVSV 191

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 57.7 bits (140), Expect = 1e-11
 Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 19/111 (17%)

Query: 5   NLYDFLKQNKFSPLPLK--YIRPILHQVLTALLKLKQLGLIHADLKPENIML-------- 54
           +L D + +N       K   ++ +L QV   L  +  + L+H D+KP NI +        
Sbjct: 97  SLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNA 156

Query: 55  -------VDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
                   D        K+ D G  + +S            + A E++   
Sbjct: 157 ASEEGDEDDWASNKVMFKIGDLGHVTRISSP--QVEEGDSRFLANEVLQEN 205

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 57.7 bits (140), Expect = 1e-11
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYL 84
            + Q+L A+  L + G++H DLKPEN++   P      +K+ DFG +  V    +  T  
Sbjct: 153 AVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDA-PLKIADFGLSKIVEHQVLMKTVC 211

Query: 85  QSRYYRAPEIILGE 98
            +  Y APEI+ G 
Sbjct: 212 GTPGYCAPEILRGC 225

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 58.1 bits (140), Expect = 1e-11
 Identities = 16/85 (18%), Positives = 26/85 (30%), Gaps = 7/85 (8%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
            L       +  QV+  L  L   GL+H  L+P +I+L     Q   V +  F       
Sbjct: 207 SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL----DQRGGVFLTGFEHLVRDG 262

Query: 77  KA---VCNTYLQSRYYRAPEIILGE 98
            +               A  ++   
Sbjct: 263 ASAVSPIGRGFAPPETTAERMLPFG 287

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 57.7 bits (140), Expect = 2e-11
 Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV--SKAVCNTY 83
            + Q+L A+L   Q+G++H +LKPEN++L     +   VK+ DFG A  V   +     +
Sbjct: 115 CIQQILEAVLHCHQMGVVHRNLKPENLLLASK-LKGAAVKLADFGLAIEVEGEQQAWFGF 173

Query: 84  LQSRYYRAPEIILGE 98
             +  Y +PE++  +
Sbjct: 174 AGTPGYLSPEVLRKD 188

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 57.0 bits (138), Expect = 2e-11
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 6/90 (6%)

Query: 8   DFLKQNKFSPLPLKYIRPILHQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRVKV 66
           + LK+    P+P + +  +   ++ AL  LK + G+IH D+KP NI L+D   Q   +K+
Sbjct: 111 EKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNI-LLDERGQ---IKL 166

Query: 67  IDFG-SASHVSKAVCNTYLQSRYYRAPEII 95
            DFG S   V     +       Y APE I
Sbjct: 167 CDFGISGRLVDDKAKDRSAGCAAYMAPERI 196

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 56.9 bits (138), Expect = 2e-11
 Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 9/98 (9%)

Query: 4   QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
             L ++++ +   PL +       +Q+L  +     + ++H D+KP+NI++         
Sbjct: 96  PTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDS----NKT 149

Query: 64  VKVIDFGSASHVSKAVC---NTYLQSRYYRAPEIILGE 98
           +K+ DFG A  +S+      N  L +  Y +PE   GE
Sbjct: 150 LKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 56.9 bits (138), Expect = 2e-11
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 6   LYDFLKQ--NKFSPLPLKYIRPILHQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPY 62
           L  F KQ  +K   +P   +  I   ++ AL  L  +L +IH D+KP N+ L++ + Q  
Sbjct: 92  LDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNV-LINALGQ-- 148

Query: 63  RVKVIDFG-SASHVSKAVCNTYLQSRYYRAPEIILGE 98
            VK+ DFG S   V     +     + Y APE I  E
Sbjct: 149 -VKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPE 184

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 57.1 bits (138), Expect = 2e-11
 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 20/106 (18%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKL--KQLGLIHADLKPENIMLVDPVRQPYR 63
           +    K     PL    +  I +Q   A+  +  ++  +IH DLK EN++L +       
Sbjct: 121 VEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSN----QGT 176

Query: 64  VKVIDFGSASHVSKAVCNTYLQSR--------------YYRAPEII 95
           +K+ DFGSA+ +S     ++   R               YR PEII
Sbjct: 177 IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII 222

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 56.9 bits (138), Expect = 2e-11
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 10/81 (12%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS-----KAVC 80
           ++  V +AL  L   G+ H DLKPENI+   P  Q   VK+ DF   S +        + 
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHP-NQVSPVKICDFDLGSGIKLNGDCSPIS 174

Query: 81  NTYLQSR----YYRAPEIILG 97
              L +      Y APE++  
Sbjct: 175 TPELLTPCGSAEYMAPEVVEA 195

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 7/98 (7%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
            +  +   L + +   +P   ++ I  Q L A+    +   IH D+KPENI L+      
Sbjct: 84  CDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENI-LITKHSV- 140

Query: 62  YRVKVIDFGSA--SHVSKAVCNTYLQSRYYRAPEIILG 97
             +K+ DFG A          +  + +R+YR+PE+++G
Sbjct: 141 --IKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVG 176

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 56.5 bits (137), Expect = 4e-11
 Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 11/100 (11%)

Query: 4   QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
             L D +      P+  K    ++     AL    Q G+IH D+KP NIM    +     
Sbjct: 101 VTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIM----ISATNA 154

Query: 64  VKVIDFGSASHVSKAVC-----NTYLQSRYYRAPEIILGE 98
           VKV+DFG A  ++ +          + +  Y +PE   G+
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 56.5 bits (137), Expect = 4e-11
 Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 9/98 (9%)

Query: 4   QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
            +L   L++    PL       I+ Q+ +AL      G  H D+KPENI++         
Sbjct: 119 VDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSA----DDF 172

Query: 64  VKVIDFGSASHVSKAVC---NTYLQSRYYRAPEIILGE 98
             ++DFG AS  +          + + YY APE     
Sbjct: 173 AYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSES 210

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 56.2 bits (136), Expect = 4e-11
 Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 11/100 (11%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKL--KQLGLIHADLKPENIMLVDPVRQ-P 61
           +LY  L  +K  P+       ++  +   +  +  +   ++H DL+  NI L       P
Sbjct: 107 DLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAP 165

Query: 62  YRVKVIDFGSA---SHVSKAVCNTYLQSRYYRAPEIILGE 98
              KV DFG +    H    +   +     + APE I  E
Sbjct: 166 VCAKVADFGLSQQSVHSVSGLLGNF----QWMAPETIGAE 201

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 56.5 bits (137), Expect = 4e-11
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           ++  + D L+    + L  + ++  L Q++  +       +IH D+KPENI LV      
Sbjct: 106 VDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENI-LVSQSGV- 162

Query: 62  YRVKVIDFGSASHVSKAVCNTY---LQSRYYRAPEIILGE 98
             VK+ DFG A  ++      Y   + +R+YRAPE+++G+
Sbjct: 163 --VKLCDFGFARTLAAPG-EVYDDEVATRWYRAPELLVGD 199

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 56.1 bits (136), Expect = 6e-11
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 5/76 (6%)

Query: 24  RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNT 82
           R I+  +L  +  L +L ++H DLKPENI+L D       +K+ DFG +  +        
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLKPENILLDD----DMNIKLTDFGFSCQLDPGEKLRE 182

Query: 83  YLQSRYYRAPEIILGE 98
              +  Y APEII   
Sbjct: 183 VCGTPSYLAPEIIECS 198

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 55.9 bits (135), Expect = 7e-11
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYL 84
           I+  +  A+  L  + + H D+KPEN++     R    +K+ DFG A   +      T  
Sbjct: 166 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSLTTPC 224

Query: 85  QSRYYRAPEIILGE 98
            + YY APE++  E
Sbjct: 225 YTPYYVAPEVLGPE 238

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 55.5 bits (134), Expect = 8e-11
 Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L+ F+ ++    L       I  Q+++A+  L+   +IH D+K ENI ++    + + +K
Sbjct: 117 LFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENI-VIA---EDFTIK 170

Query: 66  VIDFGSASHVSK-AVCNTYLQSRYYRAPEIILGE 98
           +IDFGSA+++ +  +  T+  +  Y APE+++G 
Sbjct: 171 LIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGN 204

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 55.4 bits (134), Expect = 8e-11
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV--SKAVCNTY 83
           I+ ++++A+  +  +G++H DLKPEN++  D       +K+IDFG A           T 
Sbjct: 111 IMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNL-EIKIIDFGFARLKPPDNQPLKTP 169

Query: 84  LQSRYYRAPEIILGE 98
             + +Y APE++   
Sbjct: 170 CFTLHYAAPELLNQN 184

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 55.0 bits (133), Expect = 1e-10
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 6   LYDFLKQNKFSPLPLK--YIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
           L   L+ +K+ PL      I     Q+L  L  L    ++H D+K +N+ L++       
Sbjct: 106 LSALLR-SKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNV-LINTYSG--V 161

Query: 64  VKVIDFGSASHVSK--AVCNTYLQSRYYRAPEIILGE 98
           +K+ DFG++  ++       T+  +  Y APEII   
Sbjct: 162 LKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 198

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 54.6 bits (132), Expect = 2e-10
 Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 21/108 (19%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           LYD +               +  Q+L AL  +   G+IH DLKP NI + +       VK
Sbjct: 102 LYDLIHSENL-NQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE----SRNVK 156

Query: 66  VIDFGSASHVSKAVCNTYLQSR----------------YYRAPEIILG 97
           + DFG A +V +++    L S+                 Y A E++ G
Sbjct: 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG 204

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 54.7 bits (132), Expect = 2e-10
 Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 7/93 (7%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKL--KQLGLIHADLKPENIMLVDPVRQPY 62
            L  +LK  +F  + +K +R    Q+L  L  L  +   +IH DLK +NI  +       
Sbjct: 115 TLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNI-FITGPTG-- 169

Query: 63  RVKVIDFGSASHVSKAVCNTYLQSRYYRAPEII 95
            VK+ D G A+    +     + +  + APE+ 
Sbjct: 170 SVKIGDLGLATLKRASFAKAVIGTPEFMAPEMY 202

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 54.6 bits (132), Expect = 2e-10
 Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 19/108 (17%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           ++ +L+  +     S   ++Y    ++Q L A+  L    +IH DLKP N++    +   
Sbjct: 96  MQTDLHRVISTQMLSDDHIQYF---IYQTLRAVKVLHGSNVIHRDLKPSNLL----INSN 148

Query: 62  YRVKVIDFGSASHVSKAVCNT------------YLQSRYYRAPEIILG 97
             +KV DFG A  + ++  +             ++ +R+YRAPE++L 
Sbjct: 149 CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT 196

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 54.5 bits (131), Expect = 2e-10
 Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 19/110 (17%)

Query: 4   QNLYDFLKQNK-FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY 62
           +NL D++ +              I  Q+  A+  L   GL+H DLKP NI          
Sbjct: 146 ENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTM----DD 201

Query: 63  RVKVIDFGSA--------------SHVSKAVCNTYLQSRYYRAPEIILGE 98
            VKV DFG                   + A     + ++ Y +PE I G 
Sbjct: 202 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGN 251

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 54.7 bits (132), Expect = 2e-10
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 24  RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNT 82
           R I+  +L A+  L    ++H DLKPENI+L D +    ++++ DFG + H+        
Sbjct: 203 RSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNM----QIRLSDFGFSCHLEPGEKLRE 258

Query: 83  YLQSRYYRAPEIILGE 98
              +  Y APEI+   
Sbjct: 259 LCGTPGYLAPEILKCS 274

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 53.9 bits (130), Expect = 3e-10
 Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 8/97 (8%)

Query: 6   LYDFLKQNK--FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
           L   +K  K     +P + +     Q+ +AL  +    ++H D+KP N+ +         
Sbjct: 119 LSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI----TATGV 174

Query: 64  VKVIDFGSASHVS--KAVCNTYLQSRYYRAPEIILGE 98
           VK+ D G     S      ++ + + YY +PE I   
Sbjct: 175 VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN 211

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 53.5 bits (129), Expect = 5e-10
 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           ++D+L  +    +  K  R    Q+++A+    Q  ++H DLK EN++L D       +K
Sbjct: 101 VFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL-D---ADMNIK 154

Query: 66  VIDFG-SASHVSKAVCNTYLQSRYYRAPEIILGE 98
           + DFG S         + +  +  Y APE+  G+
Sbjct: 155 IADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGK 188

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 53.3 bits (128), Expect = 6e-10
 Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%)

Query: 2   LEQNLYDFLK-------QNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIML 54
            E +L+  +K         K   LP   ++ +L+Q+L  +  L    ++H DLKP NI++
Sbjct: 102 AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILV 161

Query: 55  VDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY------YRAPEIILGE 98
           +    +  RVK+ D G A   +  +               YRAPE++LG 
Sbjct: 162 MGEGPERGRVKIADMGFARLFNSPL-KPLADLDPVVVTFWYRAPELLLGA 210

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 53.1 bits (128), Expect = 6e-10
 Identities = 27/109 (24%), Positives = 38/109 (34%), Gaps = 19/109 (17%)

Query: 5   NLYDFLKQNK-FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
           NL D++                I  Q+  A+  L   GL+H DLKP NI           
Sbjct: 101 NLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM----DDV 156

Query: 64  VKVIDFGSASHVSKAVCNTYLQSR--------------YYRAPEIILGE 98
           VKV DFG  + + +      + +                Y +PE I G 
Sbjct: 157 VKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN 205

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 52.8 bits (127), Expect = 8e-10
 Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 11/100 (11%)

Query: 6   LYDFL------KQNKFSPLPLKYIRPILHQVLTALLKL-KQLGLIHADLKPENIMLVDPV 58
           +  F        +N    +P++ I+ I+  VL +   +  +  + H D+KP NI L+D  
Sbjct: 130 ILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNI-LMD-- 186

Query: 59  RQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
            +  RVK+ DFG + ++          +  +  PE    E
Sbjct: 187 -KNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNE 225

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 52.7 bits (127), Expect = 8e-10
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 14/99 (14%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRV 64
            Y ++       +P + +  I    + AL  LK  L +IH D+KP NI L+D       +
Sbjct: 110 FYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNI-LLDRSGN---I 165

Query: 65  KVIDFGSASHVSKAVCNTYLQS-----RYYRAPEIILGE 98
           K+ DFG    +S  + ++  ++     R Y APE I   
Sbjct: 166 KLCDFG----ISGQLVDSIAKTRDAGCRPYMAPERIDPS 200

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 52.3 bits (126), Expect = 1e-09
 Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 13/102 (12%)

Query: 6   LYDFLKQNKF--SPLPLKYIRPILHQVLTAL-----LKLKQLGLIHADLKPENIMLVDPV 58
           L   + +       L  +++  ++ Q+  AL            ++H DLKP N+ L    
Sbjct: 94  LASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---- 149

Query: 59  RQPYRVKVIDFGSASHVS--KAVCNTYLQSRYYRAPEIILGE 98
                VK+ DFG A  ++   +   T++ + YY +PE +   
Sbjct: 150 DGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRM 191

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 52.3 bits (126), Expect = 1e-09
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 17/102 (16%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +LY  L  ++ +   +K +  I  Q    +  L    +IH DLK  NI  +    +   V
Sbjct: 105 SLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNI-FLH---EDNTV 159

Query: 65  KVIDFGSA--------SHVSKAVCNTYLQSRYYRAPEIILGE 98
           K+ DFG A        SH  + +  + L    + APE+I  +
Sbjct: 160 KIGDFGLATEKSRWSGSHQFEQLSGSIL----WMAPEVIRMQ 197

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 52.4 bits (126), Expect = 1e-09
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 6/82 (7%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
           PL    I  + H  L  L  L    +IH D+K  NI+L +P      VK+ DFGSAS ++
Sbjct: 150 PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG----LVKLGDFGSASIMA 205

Query: 77  KAVCNTYLQSRYYRAPEIILGE 98
            A  N+++ + Y+ APE+IL  
Sbjct: 206 PA--NSFVGTPYWMAPEVILAM 225

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 52.3 bits (126), Expect = 1e-09
 Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 9/102 (8%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
            E +L  ++ +N    + ++ I+  L+Q++  +        +H DLKP+N+ L+      
Sbjct: 115 AENDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNL-LLSVSDAS 171

Query: 62  YR--VKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILGE 98
               +K+ DFG A      +   +     + +YR PEI+LG 
Sbjct: 172 ETPVLKIGDFGLARAFGIPI-RQFTHEIITLWYRPPEILLGS 212

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 51.5 bits (124), Expect = 2e-09
 Identities = 11/97 (11%), Positives = 28/97 (28%), Gaps = 11/97 (11%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTAL--LKLKQLGLIHADLKPENIMLVDPVRQPY 62
           +LY+ L +     +           +   +  L   +  +    L   ++M+ +      
Sbjct: 95  SLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDE----DM 150

Query: 63  RVKVIDFGSA-SHVSKAVCNTYLQSRYYRAPEIILGE 98
             ++       S  S            + APE +  +
Sbjct: 151 TARISMADVKFSFQSPGRMYAPA----WVAPEALQKK 183

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 51.6 bits (124), Expect = 2e-09
 Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 7/95 (7%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           +   + +     L    I+ +  Q+L AL  L    +IH DLK  N+++         ++
Sbjct: 103 VDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG----DIR 157

Query: 66  VIDFGSASHVSKAVC--NTYLQSRYYRAPEIILGE 98
           + DFG ++   K +   ++++ + Y+ APE+++ E
Sbjct: 158 LADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCE 192

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 5/98 (5%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           ++Q+L  +L +     LP + I+ ++ Q L  L  L    ++H DLKPENI LV      
Sbjct: 101 VDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENI-LVTSGGT- 158

Query: 62  YRVKVIDFGSASHVSKAVCNTYL-QSRYYRAPEIILGE 98
             VK+ DFG A   S  +  T +  + +YRAPE++L  
Sbjct: 159 --VKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQS 194

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 50.7 bits (122), Expect = 5e-09
 Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 6/92 (6%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           +Y  L++        +     + ++  AL       +IH D+KPEN++L     +   +K
Sbjct: 96  VYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGE---LK 149

Query: 66  VIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           + DFG + H   +       +  Y  PE+I G
Sbjct: 150 IADFGWSVHAPSSRRTDLCGTLDYLPPEMIEG 181

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 50.4 bits (121), Expect = 5e-09
 Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 14/101 (13%)

Query: 5   NLYDFL-KQNKFSPLPLKYIRPILHQV---LTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           +LY+ L            +      Q    +  L  ++   LIH DLKP N++LV     
Sbjct: 85  SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA---G 141

Query: 61  PYRVKVIDFGSA---SHVSKAVCNTYLQSRYYRAPEIILGE 98
              +K+ DFG+A            +      + APE+  G 
Sbjct: 142 GTVLKICDFGTACDIQTHMTNNKGSAA----WMAPEVFEGS 178

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 50.3 bits (121), Expect = 6e-09
 Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 6/92 (6%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           LY  L+++       +     + ++  AL    +  +IH D+KPEN+++         +K
Sbjct: 101 LYKELQKHG--RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG----YKGELK 154

Query: 66  VIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
           + DFG + H       T   +  Y  PE+I G
Sbjct: 155 IADFGWSVHAPSLRRRTMCGTLDYLPPEMIEG 186

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 50.0 bits (120), Expect = 7e-09
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%)

Query: 14  KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
           +  PL    I  IL ++L  L  L     IH D+K  N++L +       VK+ DFG A 
Sbjct: 112 EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG----EVKLADFGVAG 167

Query: 74  HVSKAVC--NTYLQSRYYRAPEII 95
            ++      NT++ + ++ APE+I
Sbjct: 168 QLTDTQIKRNTFVGTPFWMAPEVI 191

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 49.9 bits (120), Expect = 8e-09
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           ++Q+L  +L +     +P + I+ ++ Q+L  L  L    ++H DLKP+NI LV    Q 
Sbjct: 101 VDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI-LVTSSGQ- 158

Query: 62  YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILGE 98
             +K+ DFG A   S  +         + +YRAPE++L  
Sbjct: 159 --IKLADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQS 194

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 50.1 bits (120), Expect = 8e-09
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%)

Query: 24  RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSKAVCNT 82
           R    Q+L+ +     + + H DLK EN  L+D    P R+K+ DFG S S V  +   +
Sbjct: 119 RFFFQQLLSGVSYCHSMQICHRDLKLENT-LLDGSPAP-RLKICDFGYSKSSVLHSQPKS 176

Query: 83  YLQSRYYRAPEIILG 97
            + +  Y APE++L 
Sbjct: 177 TVGTPAYIAPEVLLR 191

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 50.1 bits (120), Expect = 8e-09
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 7/92 (7%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           + D ++      L    I  IL   L  L  L  +  IH D+K  NI+L          K
Sbjct: 111 VSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEG----HAK 165

Query: 66  VIDFGSASHVSKAVC--NTYLQSRYYRAPEII 95
           + DFG A  ++  +   NT + + ++ APE+I
Sbjct: 166 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI 197

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 49.6 bits (119), Expect = 9e-09
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 17/103 (16%)

Query: 5   NLYDFL-KQNKFSPLPLKYIRPILHQVLTALLKL--KQLGLIHADLKPENIMLVDPVRQP 61
           +LY  L K      L  +    + + V   +  L  +   ++H +LK  N+ LVD   + 
Sbjct: 120 SLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNL-LVD---KK 175

Query: 62  YRVKVIDFGSA------SHVSKAVCNTYLQSRYYRAPEIILGE 98
           Y VKV DFG +         SK+   T      + APE++  E
Sbjct: 176 YTVKVCDFGLSRLKASTFLSSKSAAGTPE----WMAPEVLRDE 214

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 9/100 (9%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           L+Q+L   L   +   L     +  L Q+L  +       ++H DLKP+N+ L++   + 
Sbjct: 82  LDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNL-LINREGE- 138

Query: 62  YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILGE 98
             +K+ DFG A      V   Y     + +YRAP++++G 
Sbjct: 139 --LKIADFGLARAFGIPV-RKYTHEIVTLWYRAPDVLMGS 175

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 48.8 bits (117), Expect = 2e-08
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 20/100 (20%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L +  K+ K   L     R  L Q++     L +  +IH DLK  N+ L +       VK
Sbjct: 128 LLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE----DLEVK 181

Query: 66  VIDFGSASHVS------KAVCNT--YLQSRYYRAPEIILG 97
           + DFG A+ V       K +C T  Y+      APE++  
Sbjct: 182 IGDFGLATKVEYDGERKKVLCGTPNYI------APEVLSK 215

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 48.6 bits (116), Expect = 2e-08
 Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 28/99 (28%)

Query: 23  IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT 82
           I+ IL+ +L     + + G+IH DLKP N +    + Q   VKV DFG A  ++      
Sbjct: 131 IKTILYNLLLGENFIHESGIIHRDLKPANCL----LNQDCSVKVCDFGLARTINSEKDTN 186

Query: 83  ------------------------YLQSRYYRAPEIILG 97
                                   ++ +R+YRAPE+IL 
Sbjct: 187 IVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL 225

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 9/100 (9%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           +E++L   L +NK + L    I+  L+Q+L  +    Q  ++H DLKP+N+ L++     
Sbjct: 101 MEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNL-LINSDGA- 157

Query: 62  YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILGE 98
             +K+ DFG A      V  +Y     + +YRAP++++G 
Sbjct: 158 --LKLADFGLARAFGIPV-RSYTHEVVTLWYRAPDVLMGS 194

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 48.4 bits (116), Expect = 3e-08
 Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L+D++ + K   +     R    Q++ A+    +  ++H DLKPEN+ L+D       VK
Sbjct: 95  LFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENL-LLD---DNLNVK 148

Query: 66  VIDFG-SASHVSKAVCNTYLQSRYYRAPEIILGE 98
           + DFG S          T   S  Y APE+I G+
Sbjct: 149 IADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGK 182

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 9/100 (9%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
            +Q+L  +        L  + ++  L Q+L  L       ++H DLKP+N+ L++   + 
Sbjct: 83  CDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNL-LINRNGE- 139

Query: 62  YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILGE 98
             +K+ +FG A      V   Y     + +YR P+++ G 
Sbjct: 140 --LKLANFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGA 176

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 20/100 (20%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L +  K+ K   L     R  L Q++     L +  +IH DLK  N+ L +       VK
Sbjct: 102 LLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE----DLEVK 155

Query: 66  VIDFGSASHVS------KAVCNT--YLQSRYYRAPEIILG 97
           + DFG A+ V       K +C T  Y+      APE++  
Sbjct: 156 IGDFGLATKVEYDGERKKVLCGTPNYI------APEVLSK 189

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 48.2 bits (115), Expect = 3e-08
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 23/109 (21%)

Query: 5   NLYDFLKQNKFS-PLPLKYIRPI------LHQVLTALLKLKQLGLIHADLKPENIMLVDP 57
           +L DFLK N  S          +      LH+ +  L    +  + H D+K +N++    
Sbjct: 108 SLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVL---- 163

Query: 58  VRQPYRVKVIDFGSA--------SHVSKAVCNTYLQSRYYRAPEIILGE 98
           ++      + DFG A        +  +     T      Y APE++ G 
Sbjct: 164 LKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRR----YMAPEVLEGA 208

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 48.4 bits (116), Expect = 3e-08
 Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 15/75 (20%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---VCNT--Y 83
           Q++     L  L LI+ DLKPEN+++ D  +Q Y ++V DFG A  V      +C T   
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI-D--QQGY-IQVTDFGFAKRVKGRTWTLCGTPEA 204

Query: 84  LQSRYYRAPEIILGE 98
           L      APEIIL +
Sbjct: 205 L------APEIILSK 213

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 48.1 bits (115), Expect = 4e-08
 Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 9/92 (9%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L D + +          I  +  + L AL  L    +IH D+K +NI+L         VK
Sbjct: 104 LTDVVTETCMDE---GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG----SVK 156

Query: 66  VIDFGSASHVSKAVC--NTYLQSRYYRAPEII 95
           + DFG  + ++      +T + + Y+ APE++
Sbjct: 157 LTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 19/100 (19%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           +  +LK  +  P      R  +HQ++T +L L   G++H DL   N++L         +K
Sbjct: 98  MNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTR----NMNIK 152

Query: 66  VIDFGSASHVS------KAVCNT--YLQSRYYRAPEIILG 97
           + DFG A+ +         +C T  Y+      +PEI   
Sbjct: 153 IADFGLATQLKMPHEKHYTLCGTPNYI------SPEIATR 186

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 47.8 bits (114), Expect = 4e-08
 Identities = 22/73 (30%), Positives = 44/73 (60%), Gaps = 7/73 (9%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---VCNTYLQ 85
           +V+ AL  +  +G IH D+KP+N++L D  +  + +K+ DFG+   ++K     C+T + 
Sbjct: 176 EVVLALDAIHSMGFIHRDVKPDNMLL-D--KSGH-LKLADFGTCMKMNKEGMVRCDTAVG 231

Query: 86  SRYYRAPEIILGE 98
           +  Y +PE++  +
Sbjct: 232 TPDYISPEVLKSQ 244

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 47.6 bits (114), Expect = 5e-08
 Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 11/97 (11%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           + D + + +    P+        Q++  L  L   G++H D+KP N+ L+        +K
Sbjct: 97  MLDSVPEKR---FPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNL-LLT---TGGTLK 149

Query: 66  VIDFGSASHVSKAVCNTYLQ----SRYYRAPEIILGE 98
           +   G A  +     +   +    S  ++ PEI  G 
Sbjct: 150 ISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGL 186

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 47.7 bits (114), Expect = 5e-08
 Identities = 23/102 (22%), Positives = 38/102 (37%), Gaps = 21/102 (20%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            LY  ++  K   L +   R I  +++  +  L   G++H DLK +N+   D      +V
Sbjct: 115 TLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNV-FYD----NGKV 168

Query: 65  KVIDFG-----------SASHVSKAVCNTYLQSRYYRAPEII 95
            + DFG                 +           + APEII
Sbjct: 169 VITDFGLFSISGVLQAGRREDKLRIQNGWLC----HLAPEII 206

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 47.6 bits (114), Expect = 5e-08
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L+D++ ++    +     R +  Q+L+A+    +  ++H DLKPEN+ L+D        K
Sbjct: 98  LFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENV-LLD---AHMNAK 151

Query: 66  VIDFG-SASHVSKAVCNTYLQSRYYRAPEIILGE 98
           + DFG S          T   S  Y APE+I G 
Sbjct: 152 IADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGR 185

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 47.5 bits (113), Expect = 6e-08
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 35/125 (28%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
            + +     +      L   +I+ +L+ +L  +  +   G++H DLKP N  LV+   Q 
Sbjct: 139 ADSDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANC-LVN---QD 192

Query: 62  YRVKVIDFGSASHVSKAVCNT-----------------------------YLQSRYYRAP 92
             VKV DFG A  V                                    ++ +R+YRAP
Sbjct: 193 CSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAP 252

Query: 93  EIILG 97
           E+IL 
Sbjct: 253 ELILL 257

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 47.5 bits (113), Expect = 6e-08
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L+D++ +N    L  K  R +  Q+L+ +    +  ++H DLKPEN+ L+D        K
Sbjct: 103 LFDYICKNG--RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENV-LLD---AHMNAK 156

Query: 66  VIDFG-SASHVSKAVCNTYLQSRYYRAPEIILGE 98
           + DFG S          T   S  Y APE+I G 
Sbjct: 157 IADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGR 190

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 47.3 bits (113), Expect = 7e-08
 Identities = 25/110 (22%), Positives = 37/110 (33%), Gaps = 21/110 (19%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            L   +K    S  P          + + +  L  + +IH DL   N  LV    +   V
Sbjct: 93  TLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNC-LVR---ENKNV 147

Query: 65  KVIDFG----------------SASHVSKAVCNTYLQSRYYRAPEIILGE 98
            V DFG                S     +    T + + Y+ APE+I G 
Sbjct: 148 VVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGR 197

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 47.3 bits (113), Expect = 7e-08
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 26  ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV 75
           I+  +  A+  L  + + H D+KPEN++     R    +K+ DFG A   
Sbjct: 122 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKET 170

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 47.2 bits (113), Expect = 8e-08
 Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 9/100 (9%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           L+++L  +L     + + +  ++  L Q+L  L    +  ++H DLKP+N+ L++   + 
Sbjct: 82  LDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNL-LINERGE- 138

Query: 62  YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILGE 98
             +K+ DFG A   S     TY     + +YR P+I+LG 
Sbjct: 139 --LKLADFGLARAKSIPT-KTYDNEVVTLWYRPPDILLGS 175

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 46.9 bits (112), Expect = 8e-08
 Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 26/109 (23%)

Query: 5   NLYDFLKQNKFSP-LPLKYIRPI------LHQVLTALLKLKQLGLIHADLKPENIMLVDP 57
            L   L   +  P + + +   I      LH           + +IH DLK  NI+++  
Sbjct: 92  PLNRVLSGKRIPPDILVNWAVQIARGMNYLHD-------EAIVPIIHRDLKSSNILILQK 144

Query: 58  VRQPYR----VKVIDFGSA----SHVSKAVCNTYLQSRYYRAPEIILGE 98
           V         +K+ DFG A         +    Y     + APE+I   
Sbjct: 145 VENGDLSNKILKITDFGLAREWHRTTKMSAAGAYA----WMAPEVIRAS 189

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 16/78 (20%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 88
           ++++AL  L   G+IH DLKPENI+L +     + +++ DFG+A    K +     Q+R 
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILL-N--EDMH-IQITDFGTA----KVLSPESKQARA 189

Query: 89  --------YRAPEIILGE 98
                   Y +PE++  +
Sbjct: 190 NSFVGTAQYVSPELLTEK 207

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 8/100 (8%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           L++ +      N    L L  ++    Q+L  L    +  ++H DLKP+N+ L++   Q 
Sbjct: 89  LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNL-LINKRGQ- 146

Query: 62  YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILGE 98
             +K+ DFG A      V NT+     + +YRAP++++G 
Sbjct: 147 --LKLGDFGLARAFGIPV-NTFSSEVVTLWYRAPDVLMGS 183

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 46.8 bits (111), Expect = 1e-07
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 88
           +++  L  +    +++ DLKP NI+L D     + V++ D G A   SK   +  + +  
Sbjct: 300 EIILGLEHMHNRFVVYRDLKPANILL-D--EHGH-VRISDLGLACDFSKKKPHASVGTHG 355

Query: 89  YRAPEIILGE 98
           Y APE++   
Sbjct: 356 YMAPEVLQKG 365

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 46.6 bits (111), Expect = 1e-07
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 9/92 (9%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L D + Q + +    + I  +   VL AL  L   G+IH D+K ++I+L        RVK
Sbjct: 129 LTDIVSQVRLNE---EQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL----TLDGRVK 181

Query: 66  VIDFGSASHVSKAVC--NTYLQSRYYRAPEII 95
           + DFG  + +SK V    + + + Y+ APE+I
Sbjct: 182 LSDFGFCAQISKDVPKRKSLVGTPYWMAPEVI 213

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 46.6 bits (111), Expect = 1e-07
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 30/119 (25%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           +E +L+  ++ N   P+  +Y+   ++Q++  +  L   GL+H D+KP NI L++     
Sbjct: 93  METDLHAVIRANILEPVHKQYV---VYQLIKVIKYLHSGGLLHRDMKPSNI-LLN---AE 145

Query: 62  YRVKVIDFGSASHVSKAVCNT-----------------------YLQSRYYRAPEIILG 97
             VKV DFG +         T                       Y+ +R+YRAPEI+LG
Sbjct: 146 CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG 204

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 46.4 bits (110), Expect = 1e-07
 Identities = 16/99 (16%), Positives = 33/99 (33%), Gaps = 13/99 (13%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
             D +  +    +    I  IL  VL AL  +  +G +H  +K  +I++        +V 
Sbjct: 113 AKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISV----DGKVY 168

Query: 66  VIDFGSASHVSKAVC--NTYLQSR-------YYRAPEII 95
           +    S   +                      + +PE++
Sbjct: 169 LSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVL 207

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 46.3 bits (110), Expect = 2e-07
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 1   MLEQNLYDFLKQN-KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR 59
            L  +L     QN  F       +  +  ++L  L  + +   +H D+K  N++L    +
Sbjct: 133 RLGIDLQKISGQNGTFK---KSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLL--GYK 187

Query: 60  QPYRVKVIDFGSASH 74
            P +V + D+G +  
Sbjct: 188 NPDQVYLADYGLSYR 202

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 45.9 bits (109), Expect = 2e-07
 Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 2/74 (2%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
            L ++L   L  +    L  + +  +  ++L AL  L +   +H ++  ENI +      
Sbjct: 139 SLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFV--DPED 196

Query: 61  PYRVKVIDFGSASH 74
             +V +  +G A  
Sbjct: 197 QSQVTLAGYGFAFR 210

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 45.5 bits (108), Expect = 3e-07
 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 19/79 (24%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV-------SKAVCN 81
           +++ A+  + +LG +H D+KP+NI+L D  R  + +++ DFGS   +       S     
Sbjct: 170 EIVMAIDSVHRLGYVHRDIKPDNILL-D--RCGH-IRLADFGSCLKLRADGTVRSLVAVG 225

Query: 82  T--YLQSRYYRAPEIILGE 98
           T  YL      +PEI+   
Sbjct: 226 TPDYL------SPEILQAV 238

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 15/75 (20%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---VCNT--Y 83
           +V  AL  L    +I+ DLKPENI+L D  +  + +K+ DFG A +V      +C T  Y
Sbjct: 114 EVCLALEYLHSKDIIYRDLKPENILL-D--KNGH-IKITDFGFAKYVPDVTYTLCGTPDY 169

Query: 84  LQSRYYRAPEIILGE 98
           +      APE++  +
Sbjct: 170 I------APEVVSTK 178

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 45.4 bits (108), Expect = 3e-07
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 11/86 (12%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
            L    I  IL +VL  L  L + G IH D+K  NI+L +       V++ DFG ++ ++
Sbjct: 117 VLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG----SVQIADFGVSAFLA 172

Query: 77  KAVCNTYLQSR-------YYRAPEII 95
                T  + R        + APE++
Sbjct: 173 TGGDITRNKVRKTFVGTPCWMAPEVM 198

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 45.1 bits (107), Expect = 4e-07
 Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 19/79 (24%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA-------SHVSKAVCN 81
           +++ A+  + QL  +H D+KP+NI++ D     + +++ DFGS        +  S     
Sbjct: 183 EMVIAIDSVHQLHYVHRDIKPDNILM-D--MNGH-IRLADFGSCLKLMEDGTVQSSVAVG 238

Query: 82  T--YLQSRYYRAPEIILGE 98
           T  Y+      +PEI+   
Sbjct: 239 TPDYI------SPEILQAM 251

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 45.1 bits (107), Expect = 4e-07
 Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 19/107 (17%)

Query: 5   NLYDFLKQNKFS-PLPLKYIRPI------LHQVLTALLKLKQLGLIHADLKPENIMLVDP 57
           +LYD+LK         LK           LH  + +     +  + H DLK +NI+    
Sbjct: 121 SLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFS--TQGKPAIAHRDLKSKNIL---- 174

Query: 58  VRQPYRVKVIDFGSASHVSKAVCNTYLQS------RYYRAPEIILGE 98
           V++     + D G A           +        + Y  PE++   
Sbjct: 175 VKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDES 221

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 45.0 bits (107), Expect = 4e-07
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 6/77 (7%)

Query: 24  RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSK-AVCN 81
           R     ++  +  L    +IH D+KP N+ LV    +   +K+ DFG S       A+ +
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNL-LVG---EDGHIKIADFGVSNEFKGSDALLS 195

Query: 82  TYLQSRYYRAPEIILGE 98
             + +  + APE +   
Sbjct: 196 NTVGTPAFMAPESLSET 212

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 44.7 bits (106), Expect = 5e-07
 Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 19/107 (17%)

Query: 5   NLYDFLKQNKFSP-LPLKYIRPI------LHQVLTALLKLKQLGLIHADLKPENIMLVDP 57
           +LYD+L+         L+ +  I      LH  +       +  + H DLK +NI+    
Sbjct: 92  SLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFG--TQGKPAIAHRDLKSKNIL---- 145

Query: 58  VRQPYRVKVIDFGSA------SHVSKAVCNTYLQSRYYRAPEIILGE 98
           V++  +  + D G A      ++      N  + ++ Y APE++   
Sbjct: 146 VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 44.9 bits (107), Expect = 5e-07
 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 9/99 (9%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           +E +L   +K N    L   +I+  +   L  L  L Q  ++H DLKP N+ L+D     
Sbjct: 94  METDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNL-LLDENGV- 150

Query: 62  YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
             +K+ DFG A          Y     +R+YRAPE++ G
Sbjct: 151 --LKLADFGLAKSFGSPN-RAYTHQVVTRWYRAPELLFG 186

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 44.6 bits (106), Expect = 6e-07
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 17/75 (22%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-----VCNT- 82
           +++ AL  L+   +IH D+KP+NI+L D     + V + DF  A+ + +      +  T 
Sbjct: 123 ELVMALDYLQNQRIIHRDMKPDNILL-D--EHGH-VHITDFNIAAMLPRETQITTMAGTK 178

Query: 83  -YLQSRYYRAPEIIL 96
            Y+      APE+  
Sbjct: 179 PYM------APEMFS 187

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 44.1 bits (105), Expect = 8e-07
 Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 11/103 (10%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
            E +L   L  N      L  I+ ++  +L  L  + +  ++H D+K  N+ L+      
Sbjct: 106 CEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANV-LITRDGV- 162

Query: 62  YRVKVIDFGSA---SHVSKAVCNTYLQ---SRYYRAPEIILGE 98
             +K+ DFG A   S    +  N Y     + +YR PE++LGE
Sbjct: 163 --LKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE 203

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 44.4 bits (105), Expect = 9e-07
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 9/73 (12%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR--VKVIDFGSASHVSK-AVCNTYLQ 85
           ++   L  L +  +++ DLKPENI+L           +++ D G A HV +       + 
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILL------DDHGHIRISDLGLAVHVPEGQTIKGRVG 347

Query: 86  SRYYRAPEIILGE 98
           +  Y APE++  E
Sbjct: 348 TVGYMAPEVVKNE 360

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 44.0 bits (104), Expect = 1e-06
 Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 19/107 (17%)

Query: 5   NLYDFLKQNKFS-PLPLKYIRPI------LHQVLTALLKLKQLGLIHADLKPENIMLVDP 57
           +L+D+L +   +    +K           LH  +       +  + H DLK +NI+    
Sbjct: 126 SLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG--TQGKPAIAHRDLKSKNIL---- 179

Query: 58  VRQPYRVKVIDFGSA------SHVSKAVCNTYLQSRYYRAPEIILGE 98
           V++     + D G A      +       N  + ++ Y APE++   
Sbjct: 180 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 226

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 43.2 bits (102), Expect = 2e-06
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--KAVCNTYLQS 86
           Q+++ L  L Q  +I+ DLKPEN++L D       V++ D G A  +   +     Y  +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL-D--DDGN-VRISDLGLAVELKAGQTKTKGYAGT 352

Query: 87  RYYRAPEIILGE 98
             + APE++LGE
Sbjct: 353 PGFMAPELLLGE 364

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 43.0 bits (102), Expect = 2e-06
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 8/78 (10%)

Query: 24  RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTY 83
           +   HQ++  ++ L  +G+ H D+KPEN+ L+D   +   +K+ DFG A+          
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENL-LLD---ERDNLKISDFGLATVFRYNNRERL 163

Query: 84  LQ----SRYYRAPEIILG 97
           L     +  Y APE++  
Sbjct: 164 LNKMCGTLPYVAPELLKR 181

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 43.0 bits (102), Expect = 2e-06
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 18/78 (23%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
           ++++AL  L    +++ D+K EN+ML D       +K+ DFG      S     K  C T
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLML-DKDGH---IKITDFGLCKEGISDGATMKTFCGT 168

Query: 83  --YLQSRYYRAPEIILGE 98
             YL      APE++   
Sbjct: 169 PEYL------APEVLEDN 180

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 8/79 (10%)

Query: 24  RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTY 83
           +   HQ++  ++ L  +G+ H D+KPEN+ L+D   +   +K+ DFG A+          
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENL-LLD---ERDNLKISDFGLATVFRYNNRERL 163

Query: 84  LQ----SRYYRAPEIILGE 98
           L     +  Y APE++   
Sbjct: 164 LNKMCGTLPYVAPELLKRR 182

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 6/75 (8%)

Query: 1   MLEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIML-VDP 57
           +L  +L D L     KFS   +K +     Q+L  +  + +  L++ D+KP+N ++    
Sbjct: 87  LLGPSLEDLLDLCGRKFS---VKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPN 143

Query: 58  VRQPYRVKVIDFGSA 72
            +    + V+DFG  
Sbjct: 144 SKNANMIYVVDFGMV 158

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 18/78 (23%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
           ++++AL+ L   G+I+ DLK +N++L D        K+ DFG           +   C T
Sbjct: 132 EIISALMFLHDKGIIYRDLKLDNVLL-DHEGH---CKLADFGMCKEGICNGVTTATFCGT 187

Query: 83  --YLQSRYYRAPEIILGE 98
             Y+      APEI+   
Sbjct: 188 PDYI------APEILQEM 199

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 42.8 bits (101), Expect = 3e-06
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 6/75 (8%)

Query: 1   MLEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIML-VDP 57
           +L  +L D        FS   LK +  I  Q+++ +  +    LI+ D+KPEN ++    
Sbjct: 86  LLGPSLEDLFDLCDRTFS---LKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPG 142

Query: 58  VRQPYRVKVIDFGSA 72
            +    + +IDF  A
Sbjct: 143 NKTQQVIHIIDFALA 157

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 42.2 bits (100), Expect = 4e-06
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 18/78 (23%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
           ++  AL  L + G+I+ DLK +N++L D       +K+ D+G           +   C T
Sbjct: 118 EISLALNYLHERGIIYRDLKLDNVLL-DSEGH---IKLTDYGMCKEGLRPGDTTSTFCGT 173

Query: 83  --YLQSRYYRAPEIILGE 98
             Y+      APEI+ GE
Sbjct: 174 PNYI------APEILRGE 185

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 42.3 bits (99), Expect = 5e-06
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 18/78 (23%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
           ++   L  L+  G+I+ DLK +N+ML D       +K+ DFG           +K  C T
Sbjct: 450 EIAIGLFFLQSKGIIYRDLKLDNVML-DSEGH---IKIADFGMCKENIWDGVTTKTFCGT 505

Query: 83  --YLQSRYYRAPEIILGE 98
             Y+      APEII  +
Sbjct: 506 PDYI------APEIIAYQ 517

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 42.1 bits (99), Expect = 5e-06
 Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 7/76 (9%)

Query: 1   MLEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV 58
               +L    + N  +FS    K +  +  ++L  L  + +   +H D+K  N++L    
Sbjct: 133 RFGSDLQKIYEANAKRFS---RKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLL--NY 187

Query: 59  RQPYRVKVIDFGSASH 74
           + P +V ++D+G A  
Sbjct: 188 KNPDQVYLVDYGLAYR 203

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 41.9 bits (99), Expect = 5e-06
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 18/78 (23%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
           ++  AL  L + G+I+ DLK +N++L D       +K+ D+G           +   C T
Sbjct: 161 EISLALNYLHERGIIYRDLKLDNVLL-DSEGH---IKLTDYGMCKEGLRPGDTTSTFCGT 216

Query: 83  --YLQSRYYRAPEIILGE 98
             Y+      APEI+ GE
Sbjct: 217 PNYI------APEILRGE 228

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 41.9 bits (99), Expect = 6e-06
 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 18/78 (23%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
           ++ +AL  L  L +++ DLKPENI+L D   Q + + + DFG        +  +   C T
Sbjct: 147 EIASALGYLHSLNIVYRDLKPENILL-D--SQGH-IVLTDFGLCKENIEHNSTTSTFCGT 202

Query: 83  --YLQSRYYRAPEIILGE 98
             YL      APE++  +
Sbjct: 203 PEYL------APEVLHKQ 214

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 41.8 bits (99), Expect = 6e-06
 Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 18/78 (23%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
           ++  AL  L Q G+I+ DLKPENIML +   Q + VK+ DFG          V+   C T
Sbjct: 129 EISMALGHLHQKGIIYRDLKPENIML-N--HQGH-VKLTDFGLCKESIHDGTVTHTFCGT 184

Query: 83  --YLQSRYYRAPEIILGE 98
             Y+      APEI++  
Sbjct: 185 IEYM------APEILMRS 196

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 41.5 bits (98), Expect = 7e-06
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 15/77 (19%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-------AVCN 81
           +++ AL  L +LG+I+ D+K ENI+L D     + V + DFG    +SK           
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENILL-D--SNGH-VVLTDFG----LSKEFVADETERAY 218

Query: 82  TYLQSRYYRAPEIILGE 98
            +  +  Y AP+I+ G 
Sbjct: 219 DFCGTIEYMAPDIVRGG 235

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 41.4 bits (98), Expect = 8e-06
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 18/78 (23%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
           ++  AL  L  LG+I+ DLKPENI+L D   + + +K+ DFG           + + C T
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILL-D--EEGH-IKLTDFGLSKESIDHEKKAYSFCGT 189

Query: 83  --YLQSRYYRAPEIILGE 98
             Y+      APE++   
Sbjct: 190 VEYM------APEVVNRR 201

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 41.5 bits (97), Expect = 8e-06
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 6/74 (8%)

Query: 1   MLEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV 58
           +L  +L D       K S   LK +  +  Q++  +  +     +H D+KP+N  L+   
Sbjct: 84  LLGPSLEDLFNFCSRKLS---LKTVLMLADQMINRVEFVHSKSFLHRDIKPDNF-LMGLG 139

Query: 59  RQPYRVKVIDFGSA 72
           R+  +V +IDFG A
Sbjct: 140 RRANQVYIIDFGLA 153

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 41.1 bits (97), Expect = 9e-06
 Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 23/103 (22%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            L D+++++K   +  +Y+     Q+   +  L+   L+H DL   N+++      P  V
Sbjct: 102 CLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT----PQHV 156

Query: 65  KVIDFGSASHVSKAVCNTYLQSRYYR-----------APEIIL 96
           K+ DFG    ++K +     + + Y            A E IL
Sbjct: 157 KITDFG----LAKLL---GAEEKEYHAEGGKVPIKWMALESIL 192

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 18/78 (23%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
           ++   L  L+  G+I+ DLK +N+ML D       +K+ DFG           +K  C T
Sbjct: 129 EIAIGLFFLQSKGIIYRDLKLDNVML-DSEGH---IKIADFGMCKENIWDGVTTKTFCGT 184

Query: 83  --YLQSRYYRAPEIILGE 98
             Y+      APEII  +
Sbjct: 185 PDYI------APEIIAYQ 196

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 41.2 bits (97), Expect = 1e-05
 Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 13/97 (13%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L DFLK ++ S  PL  +     Q+   +  ++Q   IH DL+  NI+    V      
Sbjct: 268 SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL----VSASLVC 323

Query: 65  KVIDFGSASHVSKAVCNTYLQSRYYR------APEII 95
           K+ DFG A  +     N Y      +      APE I
Sbjct: 324 KIADFGLARVIED---NEYTAREGAKFPIKWTAPEAI 357

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 40.6 bits (95), Expect = 2e-05
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 13/97 (13%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L DFLK      L L  +  +  Q+ + +  ++++  +H DL+  NI+    V +    
Sbjct: 347 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL----VGENLVC 402

Query: 65  KVIDFGSASHVSKAVCNTYLQSRYYR------APEII 95
           KV DFG A  +     N Y   +  +      APE  
Sbjct: 403 KVADFGLARLIED---NEYTARQGAKFPIKWTAPEAA 436

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 40.5 bits (95), Expect = 2e-05
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 13/97 (13%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L DFLK      L L  +  +  Q+ + +  ++++  +H DL+  NI+    V +    
Sbjct: 264 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL----VGENLVC 319

Query: 65  KVIDFGSASHVSKAVCNTYLQSRYYR------APEII 95
           KV DFG A  +     N Y   +  +      APE  
Sbjct: 320 KVADFGLARLIED---NEYTARQGAKFPIKWTAPEAA 353

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 39.9 bits (94), Expect = 2e-05
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 18/78 (23%)

Query: 29  QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
           +++  L  L   G+++ DLK +NI+L D  +  + +K+ DFG           +   C T
Sbjct: 126 EIILGLQFLHSKGIVYRDLKLDNILL-D--KDGH-IKIADFGMCKENMLGDAKTNTFCGT 181

Query: 83  --YLQSRYYRAPEIILGE 98
             Y+      APEI+LG+
Sbjct: 182 PDYI------APEILLGQ 193

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 12/87 (13%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            L D+++++K + +  +Y+     Q+   +  L+   L+H DL   N++    V+ P  V
Sbjct: 102 CLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL----VKTPQHV 156

Query: 65  KVIDFGSASHVSKAVCNTYLQSRYYRA 91
           K+ DFG    ++K +     + + Y A
Sbjct: 157 KITDFG----LAKLL---GAEEKEYHA 176

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 39.7 bits (93), Expect = 3e-05
 Identities = 9/62 (14%), Positives = 19/62 (30%), Gaps = 5/62 (8%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
           P P+  IR  +  +  A     + G+  +   P  +     V     V +    +    +
Sbjct: 126 PSPVGAIR-AMQSLAAAADAAHRAGVALSIDHPSRVR----VSIDGDVVLAYPATMPDAN 180

Query: 77  KA 78
             
Sbjct: 181 PQ 182

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 39.3 bits (92), Expect = 4e-05
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%)

Query: 1   MLEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV 58
           +L  +L D       KFS   LK +  +  Q+++ +  +     IH D+KP+N  L+   
Sbjct: 86  LLGPSLEDLFNFCSRKFS---LKTVLLLADQMISRIEYIHSKNFIHRDVKPDNF-LMGLG 141

Query: 59  RQPYRVKVIDFGSA 72
           ++   V +IDFG A
Sbjct: 142 KKGNLVYIIDFGLA 155

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L DFLK      L +  +  +  Q+   +  +++   IH DL+  NI+    V      
Sbjct: 93  SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL----VSDTLSC 148

Query: 65  KVIDFGSA 72
           K+ DFG A
Sbjct: 149 KIADFGLA 156

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 39.0 bits (91), Expect = 6e-05
 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 13/97 (13%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           NL D+L++     +    +  +  Q+ +A+  L++   IH +L   N +    V + + V
Sbjct: 302 NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL----VGENHLV 357

Query: 65  KVIDFGSASHVSKAVCNTYLQSRYYR------APEII 95
           KV DFG +  ++    +TY      +      APE +
Sbjct: 358 KVADFGLSRLMTG---DTYTAHAGAKFPIKWTAPESL 391

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 38.9 bits (91), Expect = 8e-05
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 4/74 (5%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L D+L+    S L    +      V  A+  L+    +H DL   N++    V +    
Sbjct: 273 SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL----VSEDNVA 328

Query: 65  KVIDFGSASHVSKA 78
           KV DFG     S  
Sbjct: 329 KVSDFGLTKEASST 342

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 38.8 bits (91), Expect = 8e-05
 Identities = 16/66 (24%), Positives = 36/66 (54%), Gaps = 5/66 (7%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L D ++Q++   L  + +     Q+   +  L++ G++H +L   N++    ++ P +V
Sbjct: 100 SLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVL----LKSPSQV 154

Query: 65  KVIDFG 70
           +V DFG
Sbjct: 155 QVADFG 160

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 38.8 bits (91), Expect = 8e-05
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 4/68 (5%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           NL D+L++     +    +  +  Q+ +A+  L++   IH DL   N +    V + + V
Sbjct: 95  NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL----VGENHLV 150

Query: 65  KVIDFGSA 72
           KV DFG +
Sbjct: 151 KVADFGLS 158

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 38.6 bits (90), Expect = 9e-05
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 19/79 (24%)

Query: 29  QVLTALLKL-KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCN 81
           ++++AL  L  +  +++ DLK EN+ML D       +K+ DFG            K  C 
Sbjct: 256 EIVSALDYLHSEKNVVYRDLKLENLML-DKDGH---IKITDFGLCKEGIKDGATMKTFCG 311

Query: 82  T--YLQSRYYRAPEIILGE 98
           T  YL      APE++   
Sbjct: 312 TPEYL------APEVLEDN 324

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 38.5 bits (90), Expect = 9e-05
 Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 14/89 (15%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L D+L ++      L        Q+   +  L     IH DL   N++    +     V
Sbjct: 121 SLRDYLPRHSIGLAQLLLF---AQQICEGMAYLHAQHYIHRDLAARNVL----LDNDRLV 173

Query: 65  KVIDFGSASHVSKAVCNTYLQSRYYRAPE 93
           K+ DFG    ++KAV        YYR  E
Sbjct: 174 KIGDFG----LAKAV---PEGHEYYRVRE 195

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 13/92 (14%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIML----VDPVRQ 60
           +L  +LK+NK + + + +   +  Q+  A+  L++  LIH ++  +NI+L          
Sbjct: 98  SLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGN 156

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAP 92
           P  +K+ D G    +S  V    L     +  
Sbjct: 157 PPFIKLSDPG----ISITV----LPKDILQER 180

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 38.3 bits (89), Expect = 1e-04
 Identities = 18/85 (21%), Positives = 29/85 (34%), Gaps = 23/85 (27%)

Query: 27  LHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA-------------- 72
           LH  L      K   + H DL   N++    V+      + DFG +              
Sbjct: 127 LHTELPRGDHYK-PAISHRDLNSRNVL----VKNDGTCVISDFGLSMRLTGNRLVRPGEE 181

Query: 73  SHVSKAVCNTYLQSRYYRAPEIILG 97
            + + +   T      Y APE++ G
Sbjct: 182 DNAAISEVGTIR----YMAPEVLEG 202

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L D+L+    S L    +      V  A+  L+    +H DL   N++    V +    
Sbjct: 101 SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL----VSEDNVA 156

Query: 65  KVIDFG 70
           KV DFG
Sbjct: 157 KVSDFG 162

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 12/89 (13%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L ++L +NK + + LK       Q+   +  L     +H DL   N++    V   ++V
Sbjct: 111 SLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVL----VESEHQV 165

Query: 65  KVIDFGSASHVSKAVCNTYLQSRYYRAPE 93
           K+ DFG    ++KA+        YY   +
Sbjct: 166 KIGDFG----LTKAI---ETDKEYYTVKD 187

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 13/87 (14%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            L  +L+QN+   +  K I  ++HQV   +  L++   +H DL   N++    +   +  
Sbjct: 103 PLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVL----LVTQHYA 156

Query: 65  KVIDFGSASHVSKAVCNTYLQSRYYRA 91
           K+ DFG    +SKA+        YY+A
Sbjct: 157 KISDFG----LSKAL---RADENYYKA 176

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* Length = 282

 Score = 37.6 bits (87), Expect = 2e-04
 Identities = 11/65 (16%), Positives = 28/65 (43%), Gaps = 5/65 (7%)

Query: 8   DFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI 67
           + +   +   + ++    +L  +L  + K    G++H DL   N+++         + +I
Sbjct: 180 ELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV-----SEEGIWII 234

Query: 68  DFGSA 72
           DF  +
Sbjct: 235 DFPQS 239

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 12/87 (13%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L D L++++     L  +     QV   +  L+    IH DL   N++    +     V
Sbjct: 106 SLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLL----LATRDLV 160

Query: 65  KVIDFGSASHVSKAVCNTYLQSRYYRA 91
           K+ DFG    + +A+        +Y  
Sbjct: 161 KIGDFG----LMRAL---PQNDDHYVM 180

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 37.6 bits (87), Expect = 2e-04
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 12/87 (13%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            L+ FL   +   +P+  +  +LHQV   +  L++   +H +L   N++LV+     +  
Sbjct: 421 PLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVN----RHYA 475

Query: 65  KVIDFGSASHVSKAVCNTYLQSRYYRA 91
           K+ DFG    +SKA+        YY A
Sbjct: 476 KISDFG----LSKAL---GADDSYYTA 495

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 15/58 (25%)

Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSA-------SHVSKAVCNTYLQSRYYRAPE 93
           IH D+K  NI+L D   +     V DFG A       +HV+ AV  T      + APE
Sbjct: 156 IHRDVKAANILL-DEEFEA---VVGDFGLAKLMDYKDTHVTTAVRGTI----GHIAPE 205

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 37.2 bits (85), Expect = 3e-04
 Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 3/89 (3%)

Query: 10  LKQNKFSPLPLKYIRPILHQVLTALLKL-KQLGLIHADLKPENIMLVDPVRQP--YRVKV 66
           L+Q +     L   + ILHQ+  +L      L   H DL   N++L     +   Y +  
Sbjct: 150 LEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNG 209

Query: 67  IDFGSASHVSKAVCNTYLQSRYYRAPEII 95
                 S   +     Y  SR  R   ++
Sbjct: 210 KSSTIPSCGLQVSIIDYTLSRLERDGIVV 238

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 36.8 bits (85), Expect = 5e-04
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 5/66 (7%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            L  FL+  K   L L  +    +Q+ TAL  L+    +H D+   N++    V     V
Sbjct: 476 ELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVL----VSSNDCV 530

Query: 65  KVIDFG 70
           K+ DFG
Sbjct: 531 KLGDFG 536

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 36.5 bits (85), Expect = 5e-04
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 12/87 (13%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            L+ FL   +   +P+  +  +LHQV   +  L++   +H DL   N++    +   +  
Sbjct: 95  PLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVL----LVNRHYA 149

Query: 65  KVIDFGSASHVSKAVCNTYLQSRYYRA 91
           K+ DFG    +SKA+        YY A
Sbjct: 150 KISDFG----LSKAL---GADDSYYTA 169

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 16/59 (27%)

Query: 43  IHADLKPENIMLVDPVRQPYRVKVIDFGSA--------SHVSKAVCNTYLQSRYYRAPE 93
           IH D+K  NI+L D   + +  K+ DFG A        + ++  +  T      Y APE
Sbjct: 155 IHRDIKSANILL-D---EAFTAKISDFGLARASEKFAQTVMTSRIVGTT----AYMAPE 205

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 36.1 bits (84), Expect = 5e-04
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            L  FL+  K+S L L  +    +Q+ TAL  L+    +H D+   N++    V     V
Sbjct: 101 ELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVL----VSSNDCV 155

Query: 65  KVIDFG 70
           K+ DFG
Sbjct: 156 KLGDFG 161

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 5/66 (7%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            L  +L++NK S   L  +     Q+  A+  L+ +  +H D+   NI+    V  P  V
Sbjct: 98  ELGHYLERNKNSLKVLTLVL-YSLQICKAMAYLESINCVHRDIAVRNIL----VASPECV 152

Query: 65  KVIDFG 70
           K+ DFG
Sbjct: 153 KLGDFG 158

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 36.1 bits (84), Expect = 6e-04
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 12/89 (13%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L D+L+++K   +    +     Q+   +  L     IH DL   NI LV+      RV
Sbjct: 99  SLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNI-LVE---NENRV 153

Query: 65  KVIDFGSASHVSKAVCNTYLQSRYYRAPE 93
           K+ DFG    ++K +        +++  E
Sbjct: 154 KIGDFG----LTKVL---PQDKEFFKVKE 175

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* Length = 258

 Score = 35.8 bits (82), Expect = 7e-04
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 7/61 (11%)

Query: 17  PLPLKYIRPILHQVLTALLKL-KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV 75
            L    +  I + V+  + +L ++  L+HADL   NIM +D      +V  ID G A  +
Sbjct: 166 ELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID------KVYFIDMGQAVTL 219

Query: 76  S 76
            
Sbjct: 220 R 220

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* Length = 306

 Score = 35.8 bits (82), Expect = 9e-04
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 7/64 (10%)

Query: 16  SPLPLKYIRPILHQVLTALLKL-----KQLGLIHADLKPENIMLVDPVRQPYRVK-VIDF 69
            PL  + +R  L     + +           LIH DL P++  L +   +   +  +IDF
Sbjct: 161 FPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHF-LTNLNSRQTPLTGIIDF 219

Query: 70  GSAS 73
           G A+
Sbjct: 220 GDAA 223

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	98
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.94
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.94
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.94
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.94
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.94
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.94
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.94
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.94
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.94
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.93
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.92
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.92
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.92
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.92
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.91
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.91
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.91
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.9
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.88
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.88
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.86
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.86
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.86
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.85
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.85
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.85
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.85
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.85
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.85
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.85
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.85
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.85
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.85
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.84
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.84
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.84
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.84
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.84
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.84
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.84
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.83
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.83
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.83
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.83
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.83
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.83
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.82
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.82
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.82
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.82
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.82
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.82
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.82
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.82
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.82
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.82
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.82
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.82
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.82
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.81
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.81
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.81
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.81
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.81
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.81
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.81
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.81
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.81
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.81
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.81
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.81
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.8
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.8
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.8
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.8
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.8
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.8
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.8
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.8
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.8
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.8
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.8
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.8
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.8
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.8
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.8
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.8
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.8
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.8
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.8
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.79
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.79
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.79
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.79
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.79
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.79
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.79
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.79
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.79
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.79
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.79
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.79
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.79
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.79
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.79
3niz_A	311	Rhodanese family protein; structural genomics, str	99.79
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.78
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.78
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.78
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.78
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.78
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.78
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.78
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.78
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.78
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.78
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.78
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.78
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.78
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.78
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.78
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.78
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.78
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.78
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.78
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.78
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.78
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.78
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.78
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.78
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.78
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.78
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.78
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.78
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.78
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.77
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.77
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.77
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.77
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.77
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.77
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.77
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.77
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.77
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.77
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.77
3bhy_A	283	Death-associated protein kinase 3; death associate	99.77
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.77
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.77
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.77
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.77
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.77
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.77
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.77
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.77
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.77
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.77
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.77
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.77
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.77
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.77
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.77
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.77
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.77
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.77
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.77
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.77
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.77
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.77
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.76
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.76
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.76
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.76
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.76
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.76
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.76
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.76
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.76
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.76
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.76
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.76
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.76
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.76
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.76
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.76
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.76
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.76
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.76
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.76
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.75
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.75
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.75
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.75
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.75
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.75
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.75
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.75
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.75
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.75
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.75
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.75
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.75
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.75
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.75
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.75
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.75
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.75
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.75
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.74
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.74
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.74
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.74
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.74
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.74
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.74
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.74
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.74
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.74
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.74
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.74
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.74
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.74
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.74
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.74
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.73
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.73
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.73
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.73
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.73
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.72
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.72
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.72
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.72
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.72
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.72
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.72
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.72
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.72
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.72
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.72
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.71
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.71
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.7
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.7
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.7
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.69
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.69
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.69
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.67
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.63
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.61
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.44
3uqc_A	286	Probable conserved transmembrane protein; structur	99.31
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.22
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.7
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.29
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.2
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.18
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	96.03
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	95.76
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	95.38
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	93.64
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	93.62
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	92.5
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	90.84
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	90.0
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	89.66
3ats_A	357	Putative uncharacterized protein; hypothetical pro	89.29
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	88.7
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	86.41
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	83.1
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	80.25
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	80.01

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.94  E-value=1.2e-27  Score=140.23  Aligned_cols=91  Identities=27%  Similarity=0.504  Sum_probs=79.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.||+|.+++...+  .+++..+..++.|++.|+.|||+++|+||||+|.||++    +..+.++|+|||++..+...  
T Consensus       114 ~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl----~~~g~vKl~DFGla~~~~~~~~  187 (311)
T 4aw0_A          114 AKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESK  187 (311)
T ss_dssp             CTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTSCEEECCCTTCEECCTTTT
T ss_pred             CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEE----cCCCCEEEEEcCCceecCCCCC
Confidence            46899999998765  79999999999999999999999999999999999999    67789999999999876422  


Q ss_pred             --ccceecccccccCcccccC
Q psy11820         79 --VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~~   97 (98)
                        ...+.+||+.|||||++.+
T Consensus       188 ~~~~~~~~GTp~YmAPEvl~~  208 (311)
T 4aw0_A          188 QARANSFVGTAQYVSPELLTE  208 (311)
T ss_dssp             CCCBCCCCSCGGGCCHHHHHH
T ss_pred             cccccCcccCcccCCHHHHcC
Confidence              2356789999999999864

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.94  E-value=2.5e-27  Score=137.97  Aligned_cols=92  Identities=28%  Similarity=0.380  Sum_probs=79.3

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~   78 (98)
                      |.+|+|.+++....  .+++..+..++.|++.|+.|||+++  |+||||+|.||++..   ..+.+||+|||++......
T Consensus       111 ~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~---~~g~vKl~DFGla~~~~~~  185 (290)
T 3fpq_A          111 MTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG---PTGSVKIGDLGLATLKRAS  185 (290)
T ss_dssp             CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESS---TTSCEEECCTTGGGGCCTT
T ss_pred             CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEEC---CCCCEEEEeCcCCEeCCCC
Confidence            46899999998755  7999999999999999999999998  999999999999921   3568999999999765544


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ...+.+||+.|||||++.+
T Consensus       186 ~~~~~~GTp~YmAPE~~~~  204 (290)
T 3fpq_A          186 FAKAVIGTPEFMAPEMYEE  204 (290)
T ss_dssp             SBEESCSSCCCCCGGGGGT
T ss_pred             ccCCcccCccccCHHHcCC
Confidence            5567789999999998864

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.94  E-value=1.6e-27  Score=141.61  Aligned_cols=94  Identities=23%  Similarity=0.339  Sum_probs=81.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.||+|.+++...+...+++..+..++.|++.||.|+|+++|+||||++.||++    +..+.+||+|||+++.....  
T Consensus       105 ~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl----~~~g~vKl~DFGla~~~~~~~~  180 (350)
T 4b9d_A          105 CEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL----TKDGTVQLGDFGIARVLNSTVE  180 (350)
T ss_dssp             CTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEE----CTTCCEEECSTTEESCCCHHHH
T ss_pred             CCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE----CCCCCEEEcccccceeecCCcc
Confidence            468999999987766678999999999999999999999999999999999999    66778999999999876432  


Q ss_pred             ccceecccccccCcccccCC
Q psy11820         79 VCNTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~~   98 (98)
                      ...+.+||+.|||||++.++
T Consensus       181 ~~~~~~GT~~YmAPE~l~~~  200 (350)
T 4b9d_A          181 LARACIGTPYYLSPEICENK  200 (350)
T ss_dssp             HHHHHHSCCTTCCHHHHTTC
T ss_pred             cccccCCCccccCHHHHCCC
Confidence            23456799999999998763

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.94  E-value=8.4e-27  Score=138.37  Aligned_cols=90  Identities=32%  Similarity=0.475  Sum_probs=79.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      |.+|+|.+++...   .+++..+..++.|++.||.|||+++|+||||++.||++    +..+.+||+|||++......  
T Consensus       153 ~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl----~~~g~vKl~DFGla~~~~~~~~  225 (346)
T 4fih_A          153 LEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL----THDGRVKLSDFGFCAQVSKEVP  225 (346)
T ss_dssp             CTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECCSSSC
T ss_pred             CCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE----CCCCCEEEecCcCceecCCCCC
Confidence            4689999999764   49999999999999999999999999999999999999    67778999999999876432  


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ...+.+||+.|||||++.+
T Consensus       226 ~~~~~~GTp~YmAPEvl~~  244 (346)
T 4fih_A          226 RRKSLVGTPYWMAPELISR  244 (346)
T ss_dssp             CBCCCCSCGGGCCHHHHTT
T ss_pred             cccccccCcCcCCHHHHCC
Confidence            3456789999999999865

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.94  E-value=3.8e-27  Score=137.94  Aligned_cols=91  Identities=27%  Similarity=0.415  Sum_probs=78.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.||+|.+++....  .+++..+..++.|++.|+.|+|+++|+|||++|.||++    +..+.++|+|||+++....  .
T Consensus       108 ~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl----~~~g~vKl~DFGla~~~~~~~~  181 (304)
T 3ubd_A          108 LRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL----DEEGHIKLTDFGLSKESIDHEK  181 (304)
T ss_dssp             CTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE----CTTSCEEEESSEEEEC-----C
T ss_pred             CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEE----cCCCCEEecccccceeccCCCc
Confidence            46899999998765  79999999999999999999999999999999999999    6777899999999986532  2


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ...+.+||+.|||||++.+
T Consensus       182 ~~~~~~GT~~YmAPE~~~~  200 (304)
T 3ubd_A          182 KAYSFCGTVEYMAPEVVNR  200 (304)
T ss_dssp             CCCSCCCCGGGCCHHHHHT
T ss_pred             cccccccCcccCCHHHhcc
Confidence            3356789999999999865

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.94  E-value=1.7e-26  Score=133.68  Aligned_cols=91  Identities=30%  Similarity=0.529  Sum_probs=71.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      ++|+|.+++....  .+++..+..++.|++.|+.|+|+++|+|||++|.||++    +..+.++|+|||++...... ..
T Consensus        95 ~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl----~~~~~vkl~DFGla~~~~~~~~~  168 (275)
T 3hyh_A           95 AGNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL----DEHLNVKIADFGLSNIMTDGNFL  168 (275)
T ss_dssp             CCEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE----CTTCCEEECCSSCC---------
T ss_pred             CCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEE----CCCCCEEEeecCCCeecCCCCcc
Confidence            4789999998765  79999999999999999999999999999999999999    66778999999999865432 33


Q ss_pred             ceecccccccCcccccCC
Q psy11820         81 NTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~~   98 (98)
                      .+.+||+.|+|||++.++
T Consensus       169 ~~~~GT~~Y~APE~~~~~  186 (275)
T 3hyh_A          169 KTSCGSPNYAAPEVISGK  186 (275)
T ss_dssp             ------CTTSCHHHHSSS
T ss_pred             CCeeECcccCChhhhcCC
Confidence            567899999999998753

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.94  E-value=1.9e-26  Score=139.70  Aligned_cols=90  Identities=32%  Similarity=0.475  Sum_probs=79.2

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      |.||+|.+++...   .+++..+..++.|++.||.|||+++|+||||++.||++    +..+.+||+|||++..+...  
T Consensus       230 ~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl----~~~g~vKl~DFGla~~~~~~~~  302 (423)
T 4fie_A          230 LEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL----THDGRVKLSDFGFCAQVSKEVP  302 (423)
T ss_dssp             CTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEE----CTTCCEEECCCTTCEECCSSCC
T ss_pred             CCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE----cCCCCEEEecCccceECCCCCc
Confidence            4689999999764   49999999999999999999999999999999999999    67778999999999876432  


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ...+.+||+.|||||++.+
T Consensus       303 ~~~~~~GTp~YmAPEvl~~  321 (423)
T 4fie_A          303 RRKSLVGTPYWMAPELISR  321 (423)
T ss_dssp             CBCCCEECTTTCCHHHHTT
T ss_pred             cccccccCcCcCCHHHHCC
Confidence            3456789999999999875

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.94  E-value=1e-26  Score=137.59  Aligned_cols=92  Identities=26%  Similarity=0.339  Sum_probs=76.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCc-cEEEeeecCceeeccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY-RVKVIDFGSASHVSKA-   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~-~~~l~~~g~~~~~~~~-   78 (98)
                      |.||+|.+++...+  .+++..+..++.|++.||.|+|+++|+||||+|.||++    +..+ .+||+|||++...... 
T Consensus       132 ~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl----~~~g~~vKl~DFGla~~~~~~~  205 (336)
T 4g3f_A          132 LEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL----SSDGSRAALCDFGHALCLQPDG  205 (336)
T ss_dssp             CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEE----CTTSCCEEECCCTTCEEC----
T ss_pred             cCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE----eCCCCEEEEeeCCCCeEccCCC
Confidence            46899999998765  79999999999999999999999999999999999999    5554 6999999999865422 


Q ss_pred             ------ccceecccccccCcccccCC
Q psy11820         79 ------VCNTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        79 ------~~~~~~~~~~~~~pe~~~~~   98 (98)
                            .....+||+.|||||++.++
T Consensus       206 ~~~~~~~~~~~~GT~~YmAPE~~~~~  231 (336)
T 4g3f_A          206 LGKSLLTGDYIPGTETHMAPEVVMGK  231 (336)
T ss_dssp             --------CCCCCCGGGCCHHHHTTC
T ss_pred             cccceecCCccccCccccCHHHHCCC
Confidence                  11235799999999998763

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.94  E-value=2.2e-26  Score=134.90  Aligned_cols=92  Identities=27%  Similarity=0.345  Sum_probs=75.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc---
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK---   77 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---   77 (98)
                      |.||+|.+++.... ..+++..+..++.|++.|+.|||+++|+||||++.||++    +..+.+||+|||++.....   
T Consensus       113 ~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl----~~~~~~Ki~DFGla~~~~~~~~  187 (307)
T 3omv_A          113 CEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL----HEGLTVKIGDFGLATVKSRWSG  187 (307)
T ss_dssp             CSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEE----ETTEEEEECCCSSCBC------
T ss_pred             CCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEE----CCCCcEEEeeccCceecccCCc
Confidence            57899999997653 369999999999999999999999999999999999999    6677899999999976532   


Q ss_pred             -cccceecccccccCcccccC
Q psy11820         78 -AVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 -~~~~~~~~~~~~~~pe~~~~   97 (98)
                       .......||+.|||||++.+
T Consensus       188 ~~~~~~~~GT~~ymAPE~l~~  208 (307)
T 3omv_A          188 SQQVEQPTGSVLWMAPEVIRM  208 (307)
T ss_dssp             ------CCCCTTSCCHHHHHC
T ss_pred             ceeecccccCCCccCHHHhhc
Confidence             12345679999999999853

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.93  E-value=2.2e-26  Score=145.36  Aligned_cols=90  Identities=26%  Similarity=0.319  Sum_probs=81.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.||+|.+++....  .+++..+..++.||+.||.|||+++|+||||+|.||++    +..+.++|+|||++........
T Consensus       274 ~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILl----d~~G~vKL~DFGlA~~~~~~~~  347 (689)
T 3v5w_A          274 MNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL----DEHGHVRISDLGLACDFSKKKP  347 (689)
T ss_dssp             CCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECSSCCC
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEE----eCCCCEEecccceeeecCCCCC
Confidence            46899999998765  79999999999999999999999999999999999999    7778999999999988766555


Q ss_pred             ceecccccccCccccc
Q psy11820         81 NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~   96 (98)
                      .+.+||+.|||||++.
T Consensus       348 ~t~~GTp~YmAPEvl~  363 (689)
T 3v5w_A          348 HASVGTHGYMAPEVLQ  363 (689)
T ss_dssp             CSCCSCGGGCCHHHHS
T ss_pred             CCccCCcCccCHHHHh
Confidence            6778999999999985

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.92  E-value=4.1e-25  Score=129.23  Aligned_cols=94  Identities=29%  Similarity=0.373  Sum_probs=70.4

Q ss_pred             CcchhHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-
Q psy11820          1 MLEQNLYDFLKQNKF-SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-   78 (98)
                      +.+|+|.+++..... ...+...+..++.|++.|+.|||+++|+||||+|.||++    +..+.+||+|||++...... 
T Consensus        97 ~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl----~~~~~vKl~DFGla~~~~~~~  172 (299)
T 4g31_A           97 CRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF----TMDDVVKVGDFGLVTAMDQDE  172 (299)
T ss_dssp             CCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECCCCCC-------
T ss_pred             CCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEE----CCCCcEEEccCccceecCCCc
Confidence            358999999986541 124456688899999999999999999999999999999    66778999999999765321 


Q ss_pred             -------------ccceecccccccCcccccCC
Q psy11820         79 -------------VCNTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        79 -------------~~~~~~~~~~~~~pe~~~~~   98 (98)
                                   ...+.+||+.|||||++.++
T Consensus       173 ~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~  205 (299)
T 4g31_A          173 EEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN  205 (299)
T ss_dssp             -------------------CCCTTSCHHHHTTC
T ss_pred             cccccccccccccccCCcccCccccCHHHHcCC
Confidence                         11235799999999998753

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.92  E-value=3e-25  Score=129.77  Aligned_cols=93  Identities=23%  Similarity=0.310  Sum_probs=77.5

Q ss_pred             CcchhHHHHHhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeee
Q psy11820          1 MLEQNLYDFLKQNK-----------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF   69 (98)
Q Consensus         1 ~~~~~L~~~~~~~~-----------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~   69 (98)
                      |.+|+|.+++....           ...+++..+..++.|++.|+.|||+++++|||++++||++    +..+.+||+||
T Consensus        97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl----~~~~~~Ki~DF  172 (299)
T 4asz_A           97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV----GENLLVKIGDF  172 (299)
T ss_dssp             CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEECCC
T ss_pred             CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEE----CCCCcEEECCc
Confidence            56899999997542           3468999999999999999999999999999999999999    66778999999


Q ss_pred             cCceeecccc----cceecccccccCcccccC
Q psy11820         70 GSASHVSKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        70 g~~~~~~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      |+++......    .....+|+.|||||++.+
T Consensus       173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~  204 (299)
T 4asz_A          173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY  204 (299)
T ss_dssp             SCHHHHTGGGCEEETTTEEECGGGCCHHHHHH
T ss_pred             ccceecCCCCceeecCceecChhhcCHHHHcC
Confidence            9997653321    123458899999998764

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.92  E-value=7.1e-25  Score=129.63  Aligned_cols=93  Identities=28%  Similarity=0.386  Sum_probs=71.8

Q ss_pred             CcchhHHHHHhhCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEe
Q psy11820          1 MLEQNLYDFLKQNK-------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI   67 (98)
Q Consensus         1 ~~~~~L~~~~~~~~-------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~   67 (98)
                      |.+|+|.+++....             ...+++..+..++.|++.|+.|||+++|+|||+++.||++    +....+||+
T Consensus       125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl----~~~~~~Ki~  200 (329)
T 4aoj_A          125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV----GQGLVVKIG  200 (329)
T ss_dssp             CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----ETTTEEEEC
T ss_pred             CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEE----CCCCcEEEc
Confidence            57899999997542             2358999999999999999999999999999999999999    667799999


Q ss_pred             eecCceeeccc----ccceecccccccCcccccC
Q psy11820         68 DFGSASHVSKA----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        68 ~~g~~~~~~~~----~~~~~~~~~~~~~pe~~~~   97 (98)
                      |||+++.....    ......+|+.|||||++.+
T Consensus       201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~  234 (329)
T 4aoj_A          201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY  234 (329)
T ss_dssp             CCC----------------CCCCGGGCCHHHHTT
T ss_pred             ccccceeccCCCcceecCcccccccccChhhhcC
Confidence            99999865322    1234568899999999865

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.92  E-value=4.7e-25  Score=129.41  Aligned_cols=93  Identities=24%  Similarity=0.292  Sum_probs=77.2

Q ss_pred             CcchhHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEE
Q psy11820          1 MLEQNLYDFLKQNK--------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKV   66 (98)
Q Consensus         1 ~~~~~L~~~~~~~~--------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l   66 (98)
                      |.+|+|.+++....              ...+++..+..++.|++.|+.|||+++++|||+++.||++    +..+.+||
T Consensus       111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl----~~~~~~Ki  186 (308)
T 4gt4_A          111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV----YDKLNVKI  186 (308)
T ss_dssp             CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEE
T ss_pred             CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEE----CCCCCEEE
Confidence            57899999996432              1358899999999999999999999999999999999999    67778999


Q ss_pred             eeecCceeeccc----ccceecccccccCcccccC
Q psy11820         67 IDFGSASHVSKA----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        67 ~~~g~~~~~~~~----~~~~~~~~~~~~~pe~~~~   97 (98)
                      +|||+++.....    ......+|+.|||||++.+
T Consensus       187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~  221 (308)
T 4gt4_A          187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMY  221 (308)
T ss_dssp             CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHH
T ss_pred             CCcccceeccCCCceeEecccccCCcccCHHHHhC
Confidence            999999765322    2234568899999998754

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.91  E-value=1.1e-24  Score=127.67  Aligned_cols=90  Identities=22%  Similarity=0.355  Sum_probs=74.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc--------CCcccCCCCCcEEEecCCCCCccEEEeeecCc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQL--------GLIHADLKPENIMLVDPVRQPYRVKVIDFGSA   72 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~--------~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~   72 (98)
                      |.+|+|.+++...   .++++.+..++.|++.|+.|+|++        +|+|||+++.||++    +..+.+||+|||++
T Consensus        83 ~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl----~~~~~~Ki~DFGla  155 (303)
T 3hmm_A           83 HEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV----KKNGTCCIADLGLA  155 (303)
T ss_dssp             CTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEE----CTTSCEEECCCTTC
T ss_pred             CCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEE----CCCCCEEEEeCCCC
Confidence            5689999999865   489999999999999999999987        89999999999999    77789999999999


Q ss_pred             eeecccc------cceecccccccCcccccC
Q psy11820         73 SHVSKAV------CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        73 ~~~~~~~------~~~~~~~~~~~~pe~~~~   97 (98)
                      +......      .....||+.|||||++.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~  186 (303)
T 3hmm_A          156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDD  186 (303)
T ss_dssp             EEEETTTTEESCC-----CCGGGCCHHHHTT
T ss_pred             ccccCCCCceeeecccccccccccCHHHhcc
Confidence            8654321      123579999999999854

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.91  E-value=3.9e-25  Score=131.71  Aligned_cols=93  Identities=28%  Similarity=0.284  Sum_probs=77.3

Q ss_pred             CcchhHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEE
Q psy11820          1 MLEQNLYDFLKQNK--------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKV   66 (98)
Q Consensus         1 ~~~~~L~~~~~~~~--------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l   66 (98)
                      |.+|+|.+++....              ...+++..+..++.|++.|+.|||+++++||||+++||++    +..+.+||
T Consensus       151 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl----~~~~~vKi  226 (353)
T 4ase_A          151 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKI  226 (353)
T ss_dssp             CTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEE
T ss_pred             CCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceee----CCCCCEEE
Confidence            56899999997542              2347899999999999999999999999999999999999    66778999


Q ss_pred             eeecCceeeccc----ccceecccccccCcccccC
Q psy11820         67 IDFGSASHVSKA----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        67 ~~~g~~~~~~~~----~~~~~~~~~~~~~pe~~~~   97 (98)
                      +|||+++.....    ......+|+.|||||++.+
T Consensus       227 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~  261 (353)
T 4ase_A          227 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  261 (353)
T ss_dssp             CCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH
T ss_pred             CcchhhhhcccCCCceeeccccccccccCHHHHhc
Confidence            999999865332    1234568899999998864

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.91  E-value=1.5e-24  Score=130.93  Aligned_cols=90  Identities=33%  Similarity=0.630  Sum_probs=77.3

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc----
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK----   77 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~----   77 (98)
                      ++|+|.+++....  .+++..+..++.|++.||.|||+++|+||||+|.||++    +..+.++++|||+++.+..    
T Consensus       141 ~~g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~----~~~~~~Ki~DFGla~~~~~~~~~  214 (398)
T 4b99_A          141 MESDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV----NENCELKIGDFGMARGLCTSPAE  214 (398)
T ss_dssp             CSEEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTCCEEECCCTTCBCC------
T ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCcccccc----CCCCCEEEeecceeeecccCccc
Confidence            4688999997654  79999999999999999999999999999999999999    7778999999999976532    


Q ss_pred             --cccceecccccccCcccccC
Q psy11820         78 --AVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 --~~~~~~~~~~~~~~pe~~~~   97 (98)
                        ....+.+||++|+|||++.+
T Consensus       215 ~~~~~~~~~GT~~Y~APEv~~~  236 (398)
T 4b99_A          215 HQYFMTEYVATRWYRAPELMLS  236 (398)
T ss_dssp             -CCCCCSSCCCCTTCCHHHHTT
T ss_pred             cccccccceeChHhcCHHHhcC
Confidence              12345689999999999865

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.90  E-value=7.7e-24  Score=126.53  Aligned_cols=89  Identities=24%  Similarity=0.481  Sum_probs=72.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++.     .+++..+..++.|++.||.|+|+++|+||||+|.||++..   ..+.++|+|||+++.....  
T Consensus       102 ~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~---~~~~~kl~DFGla~~~~~~~~  173 (361)
T 4f9c_A          102 LEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNR---RLKKYALVDFGLAQGTHDTKI  173 (361)
T ss_dssp             CCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET---TTTEEEECCCTTCEECTTCSC
T ss_pred             CCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeC---CCCeEEECcCCCCcccCCccc
Confidence            35789999984     4899999999999999999999999999999999999932   2358999999999754211  


Q ss_pred             ----------------------------ccceecccccccCcccccC
Q psy11820         79 ----------------------------VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ----------------------------~~~~~~~~~~~~~pe~~~~   97 (98)
                                                  ...+.+||+.|+|||++.+
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~  220 (361)
T 4f9c_A          174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTK  220 (361)
T ss_dssp             GGGGGC--------------------------CCCCGGGCCHHHHTT
T ss_pred             cccccccccccccccccccccccccccccccccccCccccCHHHHcC
Confidence                                        1123469999999999865

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.88  E-value=4.5e-23  Score=129.11  Aligned_cols=95  Identities=25%  Similarity=0.444  Sum_probs=79.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      |.||+|.+++.... +.+++..+..++.|++.||.|||+++|+||||++.|+++..  ...+.++|.|||++..+... .
T Consensus       236 ~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~--~~~~~vKl~DFG~a~~~~~~~~  312 (573)
T 3uto_A          236 MSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT--KRSNELKLIDFGLTAHLDPKQS  312 (573)
T ss_dssp             CCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS--SSCCCEEECCCSSCEECCTTSE
T ss_pred             cCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccC--CCCCCEEEeeccceeEccCCCc
Confidence            46899999996442 36999999999999999999999999999999999999943  12368999999999876543 3


Q ss_pred             cceecccccccCcccccCC
Q psy11820         80 CNTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~~   98 (98)
                      ....+||+.|+|||++.++
T Consensus       313 ~~~~~GT~~y~APEv~~~~  331 (573)
T 3uto_A          313 VKVTTGTAEFAAPEVAEGK  331 (573)
T ss_dssp             EEEECSSGGGCCHHHHTTC
T ss_pred             eeeeEECccccCHHHhCCC
Confidence            3566899999999998753

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.88  E-value=2.9e-23  Score=129.89  Aligned_cols=88  Identities=25%  Similarity=0.383  Sum_probs=71.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.|++|.+++....  .++..   .++.|++.||.|+|++||+||||||.||++    +..+.+||.|||+++.....  
T Consensus       324 v~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL----~~dg~vKL~DFGlAr~~~~~~~  394 (569)
T 4azs_A          324 LPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMV----DARQHARLIDFGSIVTTPQDCS  394 (569)
T ss_dssp             CCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEE----CTTSCEEECCCTTEESCC---C
T ss_pred             CCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEE----CCCCCEEEeecccCeeCCCCCc
Confidence            46899999998754  67654   467899999999999999999999999999    66778999999999765432  


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ...+.+||+.|++||++.+
T Consensus       395 ~~~t~vGTp~YmAPE~l~g  413 (569)
T 4azs_A          395 WPTNLVQSFFVFVNELFAE  413 (569)
T ss_dssp             CSHHHHHHHHHHHHHHC--
T ss_pred             cccCceechhhccHHHhCC
Confidence            2345679999999999875

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.86  E-value=1.4e-21  Score=118.02  Aligned_cols=91  Identities=26%  Similarity=0.375  Sum_probs=78.2

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec--cc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--KA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~~   78 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|||+++++|||+++.||++    +..+.++|+|||++....  ..
T Consensus       135 ~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl----~~~g~ikL~DFGla~~~~~~~~  208 (396)
T 4dc2_A          135 VNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL----DSEGHIKLTDYGMCKEGLRPGD  208 (396)
T ss_dssp             CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCCCCTTC
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE----CCCCCEEEeecceeeecccCCC
Confidence            45789999998754  69999999999999999999999999999999999999    677799999999987532  22


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+||+.|+|||++.+
T Consensus       209 ~~~~~~gt~~Y~aPE~l~~  227 (396)
T 4dc2_A          209 TTSTFCGTPNYIAPEILRG  227 (396)
T ss_dssp             CBCCCCBCGGGCCHHHHTT
T ss_pred             ccccccCCcccCCchhhcC
Confidence            3456679999999999865

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.86  E-value=8.3e-22  Score=117.52  Aligned_cols=97  Identities=14%  Similarity=0.257  Sum_probs=76.6

Q ss_pred             CcchhHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecC-------CCCCccEEEeeec
Q psy11820          1 MLEQNLYDFLKQN---KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDP-------VRQPYRVKVIDFG   70 (98)
Q Consensus         1 ~~~~~L~~~~~~~---~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~-------~~~~~~~~l~~~g   70 (98)
                      +.+|+|.+++...   ....+++..+..++.|++.|+.|||+.+++|+||++.||++...       ....+.++|+|||
T Consensus       149 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG  228 (365)
T 3e7e_A          149 YSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLG  228 (365)
T ss_dssp             CCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCT
T ss_pred             cCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCc
Confidence            4579999999742   23369999999999999999999999999999999999999431       1116789999999


Q ss_pred             Cceeecc----cccceecccccccCcccccC
Q psy11820         71 SASHVSK----AVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        71 ~~~~~~~----~~~~~~~~~~~~~~pe~~~~   97 (98)
                      ++.....    .......+|+.|+|||++.+
T Consensus       229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  259 (365)
T 3e7e_A          229 QSIDMKLFPKGTIFTAKCETSGFQCVEMLSN  259 (365)
T ss_dssp             TCEEGGGSCTTEEECCSSCTTSCCCHHHHTT
T ss_pred             hhhhhhccCCCceeeeecCCCCCCChHHhcC
Confidence            9976431    12234568999999999865

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.86  E-value=3.8e-21  Score=114.02  Aligned_cols=91  Identities=24%  Similarity=0.321  Sum_probs=77.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|.|||++.....  .
T Consensus        87 ~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~g~vkL~DFG~a~~~~~~~~  160 (337)
T 1o6l_A           87 ANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML----DKDGHIKITDFGLCKEGISDGA  160 (337)
T ss_dssp             CTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCSCCTTC
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEE----CCCCCEEEeeccchhhcccCCC
Confidence            35789999998654  68999999999999999999999999999999999999    6677899999999875322  2


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+|++.|+|||++.+
T Consensus       161 ~~~~~~gt~~y~aPE~~~~  179 (337)
T 1o6l_A          161 TMKTFCGTPEYLAPEVLED  179 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSS
T ss_pred             cccccccChhhCChhhhcC
Confidence            3345678999999999864

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.85  E-value=2.6e-21  Score=115.04  Aligned_cols=91  Identities=27%  Similarity=0.400  Sum_probs=77.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec--cc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--KA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~~   78 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|.|||++....  ..
T Consensus       100 ~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~g~vkL~DFG~a~~~~~~~~  173 (345)
T 1xjd_A          100 LNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL----DKDGHIKIADFGMCKENMLGDA  173 (345)
T ss_dssp             CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCCCCTTC
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEE----CCCCCEEEeEChhhhhcccCCC
Confidence            35789999998754  68999999999999999999999999999999999999    667789999999987542  22


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+|++.|+|||++.+
T Consensus       174 ~~~~~~gt~~y~aPE~~~~  192 (345)
T 1xjd_A          174 KTNTFCGTPDYIAPEILLG  192 (345)
T ss_dssp             CBCCCCSCGGGCCHHHHTT
T ss_pred             cccCCCCCcccCChhhhcC
Confidence            3355678999999999865

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.85  E-value=3.1e-21  Score=114.99  Aligned_cols=91  Identities=25%  Similarity=0.284  Sum_probs=77.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|+|||++.....  .
T Consensus       103 ~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll----~~~g~vkL~DFG~a~~~~~~~~  176 (353)
T 2i0e_A          103 VNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML----DSEGHIKIADFGMCKENIWDGV  176 (353)
T ss_dssp             CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCCCCTTC
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE----cCCCcEEEEeCCcccccccCCc
Confidence            35789999998654  69999999999999999999999999999999999999    6677899999999875322  2


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+|++.|+|||++.+
T Consensus       177 ~~~~~~gt~~y~aPE~~~~  195 (353)
T 2i0e_A          177 TTKTFCGTPDYIAPEIIAY  195 (353)
T ss_dssp             CBCCCCSCGGGCCHHHHTT
T ss_pred             ccccccCCccccChhhhcC
Confidence            3345678999999998864

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.85  E-value=1.7e-21  Score=116.07  Aligned_cols=90  Identities=24%  Similarity=0.346  Sum_probs=73.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|+|||++.....  .
T Consensus       106 ~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl----~~~g~ikL~DFG~a~~~~~~~~  179 (353)
T 3txo_A          106 VNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL----DHEGHCKLADFGMCKEGICNGV  179 (353)
T ss_dssp             CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCSCC---
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEE----CCCCCEEEccccceeecccCCc
Confidence            45789999998754  69999999999999999999999999999999999999    6777899999999875322  2


Q ss_pred             ccceecccccccCccccc
Q psy11820         79 VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~   96 (98)
                      .....+||+.|+|||++.
T Consensus       180 ~~~~~~gt~~y~aPE~~~  197 (353)
T 3txo_A          180 TTATFCGTPDYIAPEILQ  197 (353)
T ss_dssp             ------CCGGGCCHHHHH
T ss_pred             cccccCCCcCeEChhhcC
Confidence            234567899999999875

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.85  E-value=7.2e-21  Score=114.51  Aligned_cols=90  Identities=28%  Similarity=0.434  Sum_probs=78.3

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|+|||++...... .
T Consensus        97 ~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll----~~~g~vkL~DFG~a~~~~~~~~  170 (384)
T 4fr4_A           97 LLGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL----DEHGHVHITDFNIAAMLPRETQ  170 (384)
T ss_dssp             CTTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECCTTCC
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE----CCCCCEEEeccceeeeccCCCc
Confidence            45889999998654  69999999999999999999999999999999999999    67779999999999876432 3


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....||+.|+|||++.
T Consensus       171 ~~~~~gt~~Y~aPE~~~  187 (384)
T 4fr4_A          171 ITTMAGTKPYMAPEMFS  187 (384)
T ss_dssp             BCCCCSCGGGCCGGGTC
T ss_pred             eeccCCCccccCCeeec
Confidence            35667899999999985

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.85  E-value=4.3e-21  Score=122.02  Aligned_cols=91  Identities=25%  Similarity=0.284  Sum_probs=78.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+|+|.+++....  .+++..+..++.|++.||.|||+.+|+||||++.||++    +..+.++|+|||++.....  .
T Consensus       424 ~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl----~~~g~ikL~DFGla~~~~~~~~  497 (674)
T 3pfq_A          424 VNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML----DSEGHIKIADFGMCKENIWDGV  497 (674)
T ss_dssp             CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEE----CSSSCEEECCCTTCEECCCTTC
T ss_pred             cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEE----cCCCcEEEeecceeeccccCCc
Confidence            45889999998754  69999999999999999999999999999999999999    6777999999999876432  2


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......||+.|+|||++.+
T Consensus       498 ~~~~~~GT~~Y~APE~l~~  516 (674)
T 3pfq_A          498 TTKTFCGTPDYIAPEIIAY  516 (674)
T ss_dssp             CBCCCCSCSSSCCHHHHTC
T ss_pred             ccccccCCCcccCHhhhcC
Confidence            3345679999999999864

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.85  E-value=4.3e-21  Score=116.29  Aligned_cols=90  Identities=29%  Similarity=0.553  Sum_probs=77.3

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+|+|.+++...   .+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|+|||++......  
T Consensus       151 ~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl----~~~g~ikL~DFG~a~~~~~~~~  223 (410)
T 3v8s_A          151 MPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL----DKSGHLKLADFGTCMKMNKEGM  223 (410)
T ss_dssp             CTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECCTTSE
T ss_pred             CCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeE----CCCCCEEEeccceeEeeccCCc
Confidence            4589999999764   48999999999999999999999999999999999999    67779999999999765432  


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ...+.+||+.|+|||++.+
T Consensus       224 ~~~~~~~gt~~Y~APE~l~~  243 (410)
T 3v8s_A          224 VRCDTAVGTPDYISPEVLKS  243 (410)
T ss_dssp             EECCSCCSCGGGCCHHHHHT
T ss_pred             ccccCCcCCccccCHHHhhc
Confidence             2235679999999998764

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.85  E-value=4.8e-21  Score=115.69  Aligned_cols=96  Identities=23%  Similarity=0.356  Sum_probs=71.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+|+|.+++.......+++..+..++.|++.|+.|||+.+++|+||++.||++... ...+.++|+|||++...... .
T Consensus       141 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~-~~~~~~kl~DFG~a~~~~~~~~  219 (400)
T 1nxk_A          141 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNS  219 (400)
T ss_dssp             CCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-STTCCEEECCCTTCEECC----
T ss_pred             CCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecC-CCCccEEEEecccccccCCCCc
Confidence            357899999987654569999999999999999999999999999999999999432 12568999999999865432 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       220 ~~~~~gt~~y~aPE~~~~  237 (400)
T 1nxk_A          220 LTTPCYTPYYVAPEVLGP  237 (400)
T ss_dssp             -------CTTCCGGGSCC
T ss_pred             cccCCCCCCccCHhhcCC
Confidence            345578999999999864

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.85  E-value=3.4e-21  Score=113.81  Aligned_cols=91  Identities=25%  Similarity=0.450  Sum_probs=77.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|+|||++...... .
T Consensus        96 ~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll----~~~~~~kl~DFG~a~~~~~~~~  169 (328)
T 3fe3_A           96 ASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL----DADMNIKIADFGFSNEFTVGGK  169 (328)
T ss_dssp             CTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECSTTCCGGGSSSCG
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEE----cCCCCEEEeeccCceecCCCCc
Confidence            35789999997654  69999999999999999999999999999999999999    66778999999998754332 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       170 ~~~~~gt~~y~aPE~~~~  187 (328)
T 3fe3_A          170 LDAFCGAPPYAAPELFQG  187 (328)
T ss_dssp             GGTTSSSGGGCCHHHHHT
T ss_pred             cccccCCcceeCcccccC
Confidence            345678999999998764

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.85  E-value=6.4e-21  Score=112.26  Aligned_cols=90  Identities=30%  Similarity=0.418  Sum_probs=77.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|.|||++...... .
T Consensus        88 ~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~g~~kL~Dfg~a~~~~~~-~  160 (318)
T 1fot_A           88 IEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL----DKNGHIKITDFGFAKYVPDV-T  160 (318)
T ss_dssp             CCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE----CTTSCEEECCCSSCEECSSC-B
T ss_pred             CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEE----cCCCCEEEeecCcceecCCc-c
Confidence            35789999998755  68999999999999999999999999999999999999    66778999999999765432 2


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       161 ~~~~gt~~y~aPE~~~~  177 (318)
T 1fot_A          161 YTLCGTPDYIAPEVVST  177 (318)
T ss_dssp             CCCCSCTTTCCHHHHTT
T ss_pred             ccccCCccccCHhHhcC
Confidence            45678999999998764

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.85  E-value=5.5e-21  Score=113.58  Aligned_cols=91  Identities=26%  Similarity=0.375  Sum_probs=77.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec--cc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--KA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~~   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|+|||++....  ..
T Consensus        92 ~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~g~~kL~DFG~a~~~~~~~~  165 (345)
T 3a8x_A           92 VNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL----DSEGHIKLTDYGMCKEGLRPGD  165 (345)
T ss_dssp             CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCGGGCBCSCCTTC
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE----CCCCCEEEEeccccccccCCCC
Confidence            35789999998654  69999999999999999999999999999999999999    667789999999987532  22


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      .....++++.|+|||++.+
T Consensus       166 ~~~~~~gt~~y~aPE~~~~  184 (345)
T 3a8x_A          166 TTSTFCGTPNYIAPEILRG  184 (345)
T ss_dssp             CBCCCCSCGGGCCHHHHTT
T ss_pred             cccccCCCccccCccccCC
Confidence            3345678999999999865

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.84  E-value=6.5e-21  Score=113.46  Aligned_cols=90  Identities=30%  Similarity=0.366  Sum_probs=77.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|.|||++...... .
T Consensus       123 ~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~g~~kL~DFg~a~~~~~~-~  195 (350)
T 1rdq_E          123 VAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGR-T  195 (350)
T ss_dssp             CTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECSSC-B
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEE----CCCCCEEEcccccceeccCC-c
Confidence            35789999998754  69999999999999999999999999999999999999    66778999999999865432 2


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       196 ~~~~gt~~y~aPE~~~~  212 (350)
T 1rdq_E          196 WTLCGTPEALAPEIILS  212 (350)
T ss_dssp             CCCEECGGGCCHHHHTT
T ss_pred             ccccCCccccCHHHhcC
Confidence            45678999999998764

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.84  E-value=6.3e-21  Score=114.38  Aligned_cols=91  Identities=25%  Similarity=0.364  Sum_probs=77.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|.|||++.....  .
T Consensus       121 ~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll----~~~g~ikL~DFG~a~~~~~~~~  194 (373)
T 2r5t_A          121 INGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL----DSQGHIVLTDFGLCKENIEHNS  194 (373)
T ss_dssp             CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECCCCBCGGGBCCCC
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE----CCCCCEEEeeCccccccccCCC
Confidence            35789999998754  68999999999999999999999999999999999999    6677999999999875322  2


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+|++.|+|||++.+
T Consensus       195 ~~~~~~gt~~y~aPE~~~~  213 (373)
T 2r5t_A          195 TTSTFCGTPEYLAPEVLHK  213 (373)
T ss_dssp             CCCSBSCCCCCCCHHHHTT
T ss_pred             ccccccCCccccCHHHhCC
Confidence            3345678999999999865

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.84  E-value=9.3e-21  Score=115.60  Aligned_cols=91  Identities=25%  Similarity=0.437  Sum_probs=77.2

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      |.+|+|.+++.... ..+++..+..++.|++.|+.|||+.+++|||+++.||++    +..+.++|+|||++....... 
T Consensus       156 ~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl----~~~g~vkL~DFGla~~~~~~~~  230 (437)
T 4aw2_A          156 YVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM----DMNGHIRLADFGSCLKLMEDGT  230 (437)
T ss_dssp             CTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECCTTSC
T ss_pred             CCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeE----cCCCCEEEcchhhhhhcccCCC
Confidence            46899999998642 369999999999999999999999999999999999999    677799999999997654321 


Q ss_pred             --cceecccccccCccccc
Q psy11820         80 --CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 --~~~~~~~~~~~~pe~~~   96 (98)
                        ....+||+.|+|||++.
T Consensus       231 ~~~~~~~GT~~Y~APE~l~  249 (437)
T 4aw2_A          231 VQSSVAVGTPDYISPEILQ  249 (437)
T ss_dssp             EECCSCCSCGGGCCHHHHH
T ss_pred             cccccccCCcCeeChHHHh
Confidence              23357899999999875

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.84  E-value=1e-20  Score=118.45  Aligned_cols=93  Identities=24%  Similarity=0.297  Sum_probs=79.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+|+|.+++.......+++..+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|+|||++...... .
T Consensus       266 ~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILl----d~~g~vKL~DFGla~~~~~~~~  341 (576)
T 2acx_A          266 MNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL----DDHGHIRISDLGLAVHVPEGQT  341 (576)
T ss_dssp             CCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTSCEEECCCTTCEECCTTCC
T ss_pred             CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEE----eCCCCeEEEecccceecccCcc
Confidence            458999999987654469999999999999999999999999999999999999    66779999999999876433 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....|++.|+|||++.+
T Consensus       342 ~~~~~GT~~Y~APEvl~~  359 (576)
T 2acx_A          342 IKGRVGTVGYMAPEVVKN  359 (576)
T ss_dssp             EECCCSCGGGCCHHHHTT
T ss_pred             ccccCCCccccCHHHHcC
Confidence            244578999999999865

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.84  E-value=1.1e-20  Score=115.58  Aligned_cols=89  Identities=31%  Similarity=0.512  Sum_probs=72.6

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      ++++|.+++....  .+++..+..++.|++.||.|||+.+++|+||++.||++    +..+.++|+|||++......   
T Consensus       139 ~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl----~~~~~~kl~DFGla~~~~~~~~~  212 (458)
T 3rp9_A          139 ADSDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV----NQDCSVKVCDFGLARTVDYPENG  212 (458)
T ss_dssp             CSEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTCCEEECCCTTCBCTTSCTTC
T ss_pred             cccchhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEE----CCCCCEeecccccchhccCcccc
Confidence            5789999997654  69999999999999999999999999999999999999    67778999999998764311   


Q ss_pred             --------------------------ccceecccccccCccccc
Q psy11820         79 --------------------------VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 --------------------------~~~~~~~~~~~~~pe~~~   96 (98)
                                                ......+|++|+|||++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~  256 (458)
T 3rp9_A          213 NSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL  256 (458)
T ss_dssp             CCCCC---------------------------CCCTTCCHHHHT
T ss_pred             ccccccCccccccccccccccccccccccCCcccccccChHHhh
Confidence                                      123346799999999764

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.84  E-value=2.1e-20  Score=109.20  Aligned_cols=92  Identities=34%  Similarity=0.516  Sum_probs=77.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+++|.+++.......+++..+..++.|++.|+.|||+.+++|+|+++.||++    ...+.++|.|||++...... ..
T Consensus       101 ~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~----~~~~~~kl~Dfg~a~~~~~~~~~  176 (308)
T 3g33_A          101 VDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV----TSGGTVKLADFGLARIYSYQMAL  176 (308)
T ss_dssp             CCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEE----CTTSCEEECSCSCTTTSTTCCCS
T ss_pred             hhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----cCCCCEEEeeCccccccCCCccc
Confidence            35799999987765569999999999999999999999999999999999999    66678999999998765432 22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       177 ~~~~gt~~y~aPE~~~~  193 (308)
T 3g33_A          177 TPVVVTLWYRAPEVLLQ  193 (308)
T ss_dssp             GGGGCCCSSCCHHHHHT
T ss_pred             CCccccccccCchHHcC
Confidence            44568899999998754

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.83  E-value=1.8e-20  Score=112.02  Aligned_cols=95  Identities=32%  Similarity=0.457  Sum_probs=77.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|++|.||++.........++|.|||++...... .
T Consensus        97 ~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~  174 (361)
T 2yab_A           97 VSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE  174 (361)
T ss_dssp             CCSCBHHHHHTTCS--CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCC
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCc
Confidence            35899999997654  79999999999999999999999999999999999999432222237999999999876433 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....|++.|+|||++.+
T Consensus       175 ~~~~~gt~~y~aPE~~~~  192 (361)
T 2yab_A          175 FKNIFGTPEFVAPEIVNY  192 (361)
T ss_dssp             CCCCCSCGGGCCHHHHTT
T ss_pred             cccCCCCccEECchHHcC
Confidence            345678999999998764

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.83  E-value=2.9e-20  Score=115.87  Aligned_cols=93  Identities=25%  Similarity=0.328  Sum_probs=78.5

Q ss_pred             CcchhHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc
Q psy11820          1 MLEQNLYDFLKQNK--FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~   78 (98)
                      +.+|+|.+++....  ...+++..+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|.|||++......
T Consensus       267 ~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl----~~~g~vkL~DFGla~~~~~~  342 (543)
T 3c4z_A          267 MNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL----DDDGNVRISDLGLAVELKAG  342 (543)
T ss_dssp             CTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTSCEEECCCTTCEECCTT
T ss_pred             ccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEE----eCCCCEEEeecceeeeccCC
Confidence            45789999997643  3468999999999999999999999999999999999999    67778999999999876432


Q ss_pred             --ccceecccccccCcccccC
Q psy11820         79 --VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~~   97 (98)
                        ......||+.|+|||++.+
T Consensus       343 ~~~~~~~~GT~~Y~APE~l~~  363 (543)
T 3c4z_A          343 QTKTKGYAGTPGFMAPELLLG  363 (543)
T ss_dssp             CCCBCCCCSCTTTSCHHHHTT
T ss_pred             CcccccccCCccccChhhhcC
Confidence              2234578999999999865

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.83  E-value=2.8e-20  Score=110.25  Aligned_cols=90  Identities=30%  Similarity=0.504  Sum_probs=77.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+|+|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++...... ..
T Consensus        91 ~~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll----~~~~~~kl~DFG~s~~~~~~~~~  164 (336)
T 3h4j_B           91 AGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL----DDNLNVKIADFGLSNIMTDGNFL  164 (336)
T ss_dssp             CCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEE----CTTCCEEECCSSCTBTTTTSBTT
T ss_pred             CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEE----cCCCCEEEEEeccceeccCCccc
Confidence            3688999887654  69999999999999999999999999999999999999    66778999999998765432 23


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ...++++.|+|||++.+
T Consensus       165 ~~~~gt~~y~aPE~~~~  181 (336)
T 3h4j_B          165 KTSCGSPNYAAPEVING  181 (336)
T ss_dssp             CCCTTSTTTSCGGGSCC
T ss_pred             ccccCCcCcCCHHHHcC
Confidence            45678999999999865

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.83  E-value=2.3e-20  Score=113.16  Aligned_cols=91  Identities=25%  Similarity=0.450  Sum_probs=77.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      +.+|+|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|+++.||++    +..+.++|+|||++....... 
T Consensus       143 ~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl----d~~g~vkL~DFGla~~~~~~~~  217 (412)
T 2vd5_A          143 YVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL----DRCGHIRLADFGSCLKLRADGT  217 (412)
T ss_dssp             CCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECCTTSC
T ss_pred             CCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeee----cCCCCEEEeechhheeccCCCc
Confidence            45899999997642 268999999999999999999999999999999999999    677799999999997654321 


Q ss_pred             --cceecccccccCccccc
Q psy11820         80 --CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 --~~~~~~~~~~~~pe~~~   96 (98)
                        ....+||+.|+|||++.
T Consensus       218 ~~~~~~~Gt~~Y~APE~l~  236 (412)
T 2vd5_A          218 VRSLVAVGTPDYLSPEILQ  236 (412)
T ss_dssp             EECSSCCSCGGGCCHHHHH
T ss_pred             cccceeccccCcCCHHHHh
Confidence              23457899999999875

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.83  E-value=3.7e-20  Score=107.96  Aligned_cols=90  Identities=27%  Similarity=0.405  Sum_probs=76.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++...   .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|.|||++......  
T Consensus        99 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~  171 (297)
T 3fxz_A           99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL----GMDGSVKLTDFGFCAQITPEQS  171 (297)
T ss_dssp             CTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECCSTTC
T ss_pred             CCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEE----CCCCCEEEeeCCCceecCCccc
Confidence            3588999999865   48999999999999999999999999999999999999    66678999999998765432  


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       172 ~~~~~~gt~~y~aPE~~~~  190 (297)
T 3fxz_A          172 KRSTMVGTPYWMAPEVVTR  190 (297)
T ss_dssp             CBCCCCSCGGGCCHHHHHC
T ss_pred             ccCCccCCcCccChhhhcC
Confidence            2344578999999998754

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.83  E-value=5.4e-20  Score=107.53  Aligned_cols=92  Identities=26%  Similarity=0.403  Sum_probs=75.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|.|||++........
T Consensus        89 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~  163 (310)
T 3s95_A           89 IKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV----RENKNVVVADFGLARLMVDEKT  163 (310)
T ss_dssp             CTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE----CTTSCEEECCCTTCEECC----
T ss_pred             cCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEE----CCCCCEEEeecccceecccccc
Confidence            35789999998743 368999999999999999999999999999999999999    6677899999999876532111


Q ss_pred             ----------------ceecccccccCcccccC
Q psy11820         81 ----------------NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ----------------~~~~~~~~~~~pe~~~~   97 (98)
                                      ....+++.|+|||++.+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  196 (310)
T 3s95_A          164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING  196 (310)
T ss_dssp             ----------------CCCCSCGGGCCHHHHTT
T ss_pred             cccccccccccccccccccCCCcceeCHHHhcC
Confidence                            14568899999998764

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.82  E-value=3.1e-20  Score=113.04  Aligned_cols=89  Identities=36%  Similarity=0.540  Sum_probs=73.6

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      ++++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|+|||++......   
T Consensus       112 ~~~~L~~~~~~~~--~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl----~~~~~~kL~DFGla~~~~~~~~~  185 (432)
T 3n9x_A          112 ADSDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL----NQDCSVKVCDFGLARTINSEKDT  185 (432)
T ss_dssp             CSEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEEC------
T ss_pred             CCcCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEE----CCCCCEEEccCCCcccccccccc
Confidence            5679999998654  69999999999999999999999999999999999999    66778999999999865321   


Q ss_pred             ---------------------ccceecccccccCccccc
Q psy11820         79 ---------------------VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ---------------------~~~~~~~~~~~~~pe~~~   96 (98)
                                           ......+|++|+|||++.
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~  224 (432)
T 3n9x_A          186 NIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL  224 (432)
T ss_dssp             -------------------------CCCCCTTCCHHHHT
T ss_pred             cccccccccccccccccchhccccCCCCCccccCHHHHh
Confidence                                 124557899999999863

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.82  E-value=5.3e-20  Score=109.43  Aligned_cols=95  Identities=38%  Similarity=0.667  Sum_probs=77.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCC---------------------CC
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV---------------------RQ   60 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~---------------------~~   60 (98)
                      .+++|.+++.......++...+..++.|++.|+.|||+.+++|+|+++.||++..+.                     ..
T Consensus       118 ~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (360)
T 3llt_A          118 LGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTK  197 (360)
T ss_dssp             CCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEES
T ss_pred             CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccC
Confidence            378999999887666799999999999999999999999999999999999994311                     12


Q ss_pred             CccEEEeeecCceeecccccceecccccccCcccccC
Q psy11820         61 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        61 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~pe~~~~   97 (98)
                      ...++|+|||++...... .....+++.|+|||++.+
T Consensus       198 ~~~~kl~DFG~a~~~~~~-~~~~~gt~~y~aPE~~~~  233 (360)
T 3llt_A          198 STGIKLIDFGCATFKSDY-HGSIINTRQYRAPEVILN  233 (360)
T ss_dssp             CCCEEECCCTTCEETTSC-CCSCCSCGGGCCHHHHTT
T ss_pred             CCCEEEEeccCceecCCC-CcCccCcccccCcHHHcC
Confidence            567999999999764332 245568899999999764

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.82  E-value=6.9e-20  Score=111.98  Aligned_cols=94  Identities=26%  Similarity=0.399  Sum_probs=77.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|||+.+++|+|++|.||++... ...+.++|.|||++......  
T Consensus        92 ~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~-~~~~~vkL~DFG~a~~~~~~~~  168 (444)
T 3soa_A           92 VTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASK-LKGAAVKLADFGLAIEVEGEQQ  168 (444)
T ss_dssp             CBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBS-STTCCEEECCCSSCBCCCTTCC
T ss_pred             CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecc-CCCCcEEEccCceeEEecCCCc
Confidence            35789999998765  69999999999999999999999999999999999999432 13467999999999765432  


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       169 ~~~~~~gt~~Y~APE~l~~  187 (444)
T 3soa_A          169 AWFGFAGTPGYLSPEVLRK  187 (444)
T ss_dssp             BCCCSCSCGGGCCHHHHTT
T ss_pred             eeecccCCcccCCHHHhcC
Confidence            2234578999999999764

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.82  E-value=5.2e-20  Score=108.51  Aligned_cols=91  Identities=24%  Similarity=0.357  Sum_probs=75.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCcc-----EEEeeecCceeec
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR-----VKVIDFGSASHVS   76 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~-----~~l~~~g~~~~~~   76 (98)
                      .+++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    ...+.     ++|+|||++....
T Consensus        87 ~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill----~~~~~~~~~~~kl~DFg~a~~~~  161 (330)
T 2izr_A           87 LGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLI----GRPGNKTQQVIHIIDFALAKEYI  161 (330)
T ss_dssp             CCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CCGGGTCTTSEEECCCTTCEESB
T ss_pred             CCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeee----ccCCCCCCceEEEEEcccceeee
Confidence            3789999998652 369999999999999999999999999999999999999    44444     9999999998653


Q ss_pred             ccc---------cceecccccccCcccccC
Q psy11820         77 KAV---------CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        77 ~~~---------~~~~~~~~~~~~pe~~~~   97 (98)
                      ...         .....+++.|+|||++.+
T Consensus       162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  191 (330)
T 2izr_A          162 DPETKKHIPYREHKSLTGTARYMSINTHLG  191 (330)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred             cCCCCccccccccCCcCCCccccChHHHcC
Confidence            321         134578999999998865

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.82  E-value=2.6e-20  Score=113.62  Aligned_cols=91  Identities=26%  Similarity=0.332  Sum_probs=75.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--   77 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--   77 (98)
                      |.+++|.+++....  .+++..+..++.|++.||.|||+ .+++|+|+++.||++    +..+.++|+|||++.....  
T Consensus       230 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll----~~~~~~kl~DFG~a~~~~~~~  303 (446)
T 4ejn_A          230 ANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML----DKDGHIKITDFGLCKEGIKDG  303 (446)
T ss_dssp             CSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEE----CSSSCEEECCCCCCCTTCC--
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEE----CCCCCEEEccCCCceeccCCC
Confidence            45789999998655  68999999999999999999998 999999999999999    6667899999999875322  


Q ss_pred             cccceecccccccCcccccC
Q psy11820         78 AVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 ~~~~~~~~~~~~~~pe~~~~   97 (98)
                      .......+++.|+|||++.+
T Consensus       304 ~~~~~~~gt~~y~aPE~~~~  323 (446)
T 4ejn_A          304 ATMKTFCGTPEYLAPEVLED  323 (446)
T ss_dssp             ---CCSSSCGGGCCHHHHHT
T ss_pred             cccccccCCccccCHhhcCC
Confidence            22345678999999998754

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.82  E-value=2.7e-20  Score=108.38  Aligned_cols=91  Identities=25%  Similarity=0.480  Sum_probs=72.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||++......  
T Consensus        93 ~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~  166 (294)
T 4eqm_A           93 IEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI----DSNKTLKIFDFGIAKALSETSL  166 (294)
T ss_dssp             CCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECCCSSSTTC-----
T ss_pred             CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEEeCCCccccccccc
Confidence            35789999998765  69999999999999999999999999999999999999    66678999999998754322  


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+++.|+|||.+.+
T Consensus       167 ~~~~~~~gt~~y~aPE~~~~  186 (294)
T 4eqm_A          167 TQTNHVLGTVQYFSPEQAKG  186 (294)
T ss_dssp             --------CCSSCCHHHHHT
T ss_pred             cccCccccCccccCHhHhcC
Confidence             1233568899999998764

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=4.5e-20  Score=109.88  Aligned_cols=91  Identities=26%  Similarity=0.411  Sum_probs=76.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+.+++|+||++.||++    +..+.++|.|||++......  
T Consensus       141 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~DfG~a~~~~~~~~  214 (355)
T 1vzo_A          141 INGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL----DSNGHVVLTDFGLSKEFVADET  214 (355)
T ss_dssp             CCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEESCSSEEEECCGGGG
T ss_pred             CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCcEEEeeCCCCeecccCCC
Confidence            35789999998654  68999999999999999999999999999999999999    66778999999998765322  


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+++.|+|||++.+
T Consensus       215 ~~~~~~~gt~~y~aPE~~~~  234 (355)
T 1vzo_A          215 ERAYDFCGTIEYMAPDIVRG  234 (355)
T ss_dssp             GGGCGGGSCCTTCCHHHHTT
T ss_pred             CcccCcccCcCccChhhhcC
Confidence             2234568999999999864

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.82  E-value=5.6e-20  Score=109.15  Aligned_cols=94  Identities=27%  Similarity=0.416  Sum_probs=77.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+|+|.+++....  .+++..+..++.+++.|+.|||+++++|+|+++.||++.........++|.|||++......  
T Consensus        98 ~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~  175 (342)
T 2qr7_A           98 MKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG  175 (342)
T ss_dssp             CCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence            35789999998654  68999999999999999999999999999999999998544333456999999999865432  


Q ss_pred             ccceecccccccCccccc
Q psy11820         79 VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~   96 (98)
                      ......+++.|+|||++.
T Consensus       176 ~~~~~~gt~~y~aPE~~~  193 (342)
T 2qr7_A          176 LLMTPCYTANFVAPEVLE  193 (342)
T ss_dssp             CBCCSSCCSSCCCHHHHH
T ss_pred             ceeccCCCccccCHHHhc
Confidence            234556889999999875

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.82  E-value=3.1e-20  Score=114.32  Aligned_cols=90  Identities=32%  Similarity=0.494  Sum_probs=77.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|+|||++...... ..
T Consensus        99 ~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll----~~~~~vkL~DFG~a~~~~~~~~~  172 (476)
T 2y94_A           99 SGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL----DAHMNAKIADFGLSNMMSDGEFL  172 (476)
T ss_dssp             SSEEHHHHTTSSS--SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEE----CTTCCEEECCCSSCEECCTTCCB
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEE----ecCCCeEEEeccchhhccccccc
Confidence            5789999997654  69999999999999999999999999999999999999    66778999999999876432 23


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      .+.++++.|+|||++.+
T Consensus       173 ~~~~gt~~y~aPE~~~~  189 (476)
T 2y94_A          173 RTSCGSPNYAAPEVISG  189 (476)
T ss_dssp             CCCCSCSTTCCHHHHTT
T ss_pred             cccCCCcCeEChhhccC
Confidence            45678999999999865

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.82  E-value=4.7e-20  Score=108.75  Aligned_cols=91  Identities=33%  Similarity=0.412  Sum_probs=73.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+++++|+|+++.||++    +..+.++|.|||++......  
T Consensus       103 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~~~  176 (327)
T 3a62_A          103 LSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML----NHQGHVKLTDFGLCKESIHDGT  176 (327)
T ss_dssp             CTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE----CTTSCEEECCCSCC--------
T ss_pred             CCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEE----CCCCcEEEEeCCcccccccCCc
Confidence            35789999998654  68999999999999999999999999999999999999    66678999999988754221  


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       177 ~~~~~~gt~~y~aPE~~~~  195 (327)
T 3a62_A          177 VTHTFCGTIEYMAPEILMR  195 (327)
T ss_dssp             --CTTSSCCTTSCHHHHTT
T ss_pred             cccccCCCcCccCHhhCcC
Confidence            2234568899999998754

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.82  E-value=6.2e-20  Score=108.22  Aligned_cols=94  Identities=34%  Similarity=0.506  Sum_probs=76.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.||++.........++|+|||++...... ..
T Consensus        97 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~  174 (326)
T 2y0a_A           97 AGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF  174 (326)
T ss_dssp             CSCBHHHHHTTSS--CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCC
T ss_pred             CCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCcc
Confidence            5789999997654  69999999999999999999999999999999999999443222337999999999876432 23


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       175 ~~~~gt~~y~aPE~~~~  191 (326)
T 2y0a_A          175 KNIFGTPEFVAPEIVNY  191 (326)
T ss_dssp             CCCCSCTTTCCHHHHTT
T ss_pred             ccccCCcCcCCceeecC
Confidence            44568999999998764

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.82  E-value=1.1e-20  Score=111.61  Aligned_cols=90  Identities=18%  Similarity=0.212  Sum_probs=70.5

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCCcccCCCCCcEEEecCCC----------------CCccEE
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLK-QLGLIHADLKPENIMLVDPVR----------------QPYRVK   65 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh-~~~~~h~~l~~~~~~~~~~~~----------------~~~~~~   65 (98)
                      +|++.+.+..   ..+++..+..++.|++.|+.||| +++++||||+|.||++.....                ....++
T Consensus       146 ~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vk  222 (336)
T 2vuw_A          146 GGIDLEQMRT---KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVS  222 (336)
T ss_dssp             CCEETGGGTT---TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEE
T ss_pred             CCccHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEE
Confidence            4544444432   35899999999999999999999 999999999999999954321                112799


Q ss_pred             EeeecCceeecccccceecccccccCcccccCC
Q psy11820         66 VIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        66 l~~~g~~~~~~~~~~~~~~~~~~~~~pe~~~~~   98 (98)
                      |+|||++......   ...+|+.|+|||++.++
T Consensus       223 L~DFG~a~~~~~~---~~~gt~~y~aPE~~~g~  252 (336)
T 2vuw_A          223 IIDYTLSRLERDG---IVVFCDVSMDEDLFTGD  252 (336)
T ss_dssp             ECCCTTCBEEETT---EEECCCCTTCSGGGCCC
T ss_pred             EeeccccEecCCC---cEEEeecccChhhhcCC
Confidence            9999999876432   44788999999998763

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.82  E-value=4.8e-20  Score=112.16  Aligned_cols=91  Identities=51%  Similarity=0.846  Sum_probs=76.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCcc--EEEeeecCceeecccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR--VKVIDFGSASHVSKAV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~--~~l~~~g~~~~~~~~~   79 (98)
                      ++++|.+++.......+++..+..++.|++.|+.|||+.+++|+||++.||++    ...+.  ++|+|||++...... 
T Consensus       181 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl----~~~~~~~vkL~DFG~a~~~~~~-  255 (429)
T 3kvw_A          181 LSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL----KQQGRSGIKVIDFGSSCYEHQR-  255 (429)
T ss_dssp             CCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEE----SSTTSCCEEECCCTTCEETTCC-
T ss_pred             cCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----ccCCCcceEEeecccceecCCc-
Confidence            46789999988766679999999999999999999999999999999999999    44444  999999998654332 


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       256 ~~~~~gt~~y~aPE~~~~  273 (429)
T 3kvw_A          256 VYTYIQSRFYRAPEVILG  273 (429)
T ss_dssp             CCSSCSCGGGCCHHHHHT
T ss_pred             ccccCCCCCccChHHHhC
Confidence            345578899999998764

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.81  E-value=5.9e-20  Score=108.68  Aligned_cols=96  Identities=24%  Similarity=0.362  Sum_probs=62.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+++|.+++.......+++..+..++.|++.|+.|||+.+++|+|+++.||++... .....++|.|||++........
T Consensus       108 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~-~~~~~~kl~Dfg~~~~~~~~~~  186 (336)
T 3fhr_A          108 MEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSK-EKDAVLKLTDFGFAKETTQNAL  186 (336)
T ss_dssp             CTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS-STTCCEEECCCTTCEEC-----
T ss_pred             cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEec-CCCceEEEeccccceecccccc
Confidence            357899999987655579999999999999999999999999999999999999432 1245699999999986654444


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       187 ~~~~~t~~y~aPE~~~~  203 (336)
T 3fhr_A          187 QTPCYTPYYVAPEVLGP  203 (336)
T ss_dssp             -----------------
T ss_pred             ccCCCCcCccChhhhCC
Confidence            55667899999998753

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.81  E-value=5.8e-20  Score=106.79  Aligned_cols=89  Identities=26%  Similarity=0.387  Sum_probs=74.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH--------HcCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLK--------QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh--------~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      .+++|.+++...   .+++..+..++.|++.|+.|+|        +.+++|+|+++.||++    +..+.++|+|||++.
T Consensus        89 ~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfg~a~  161 (301)
T 3q4u_A           89 EMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV----KKNGQCCIADLGLAV  161 (301)
T ss_dssp             TTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEE----CTTSCEEECCCTTCE
T ss_pred             cCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEE----cCCCCEEEeeCCCee
Confidence            478999999643   5899999999999999999999        9999999999999999    667789999999987


Q ss_pred             eecccc------cceecccccccCcccccC
Q psy11820         74 HVSKAV------CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        74 ~~~~~~------~~~~~~~~~~~~pe~~~~   97 (98)
                      ......      .....+++.|+|||++.+
T Consensus       162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  191 (301)
T 3q4u_A          162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDE  191 (301)
T ss_dssp             EEETTTTEEECCCCCCCCCGGGCCHHHHTT
T ss_pred             ecccccccccccccccccccceeChhhhcC
Confidence            654321      123368899999998764

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.81  E-value=1e-19  Score=108.70  Aligned_cols=94  Identities=22%  Similarity=0.375  Sum_probs=76.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.||++... .....++|.|||++...... .
T Consensus       110 ~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~-~~~~~~kl~DfG~a~~~~~~~~  186 (362)
T 2bdw_A          110 VTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASK-AKGAAVKLADFGLAIEVNDSEA  186 (362)
T ss_dssp             CCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCS-STTCCEEECCCTTCBCCTTCCS
T ss_pred             CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecC-CCCCCEEEeecCcceEecCCcc
Confidence            35789999997654  68999999999999999999999999999999999999432 12346999999998765432 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       187 ~~~~~gt~~y~aPE~~~~  204 (362)
T 2bdw_A          187 WHGFAGTPGYLSPEVLKK  204 (362)
T ss_dssp             CCCSCSCTTTCCHHHHTT
T ss_pred             cccCCCCccccCHHHHcc
Confidence            234578999999998764

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=1.2e-19  Score=106.92  Aligned_cols=94  Identities=24%  Similarity=0.380  Sum_probs=76.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|++|.||++...  ..+.+++.|||++...... .
T Consensus        83 ~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~--~~~~~kl~Dfg~a~~~~~~~~  159 (321)
T 1tki_A           83 ISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR--RSSTIKIIEFGQARQLKPGDN  159 (321)
T ss_dssp             CCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS--SCCCEEECCCTTCEECCTTCE
T ss_pred             CCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC--CCCCEEEEECCCCeECCCCCc
Confidence            35789999997543 358999999999999999999999999999999999999431  1568999999999876432 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       160 ~~~~~gt~~y~aPE~~~~  177 (321)
T 1tki_A          160 FRLLFTAPEYYAPEVHQH  177 (321)
T ss_dssp             EEEEESCGGGSCHHHHTT
T ss_pred             cccccCChhhcCcHHhcC
Confidence            344568899999998764

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.81  E-value=1.2e-19  Score=108.62  Aligned_cols=93  Identities=20%  Similarity=0.304  Sum_probs=75.0

Q ss_pred             CcchhHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEE
Q psy11820          1 MLEQNLYDFLKQNKF--------------SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKV   66 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~--------------~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l   66 (98)
                      +.+|+|.+++.....              ..+++..+..++.|++.|+.|||+++++|+||++.||++    +..+.++|
T Consensus       169 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~~~~kl  244 (370)
T 2psq_A          169 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TENNVMKI  244 (370)
T ss_dssp             CTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTCCEEE
T ss_pred             CCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEE----CCCCCEEE
Confidence            357899999986531              247889999999999999999999999999999999999    66778999


Q ss_pred             eeecCceeeccc----ccceecccccccCcccccC
Q psy11820         67 IDFGSASHVSKA----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        67 ~~~g~~~~~~~~----~~~~~~~~~~~~~pe~~~~   97 (98)
                      +|||++......    ......+++.|+|||++.+
T Consensus       245 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  279 (370)
T 2psq_A          245 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD  279 (370)
T ss_dssp             CCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHT
T ss_pred             ccccCCcccCcccceecccCCCcccceECHhHhcC
Confidence            999999865332    1122345678999998754

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.81  E-value=1.1e-19  Score=106.52  Aligned_cols=91  Identities=31%  Similarity=0.404  Sum_probs=74.6

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      ++++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|+|||++...... ..
T Consensus       139 ~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll----~~~~~~kl~DFG~a~~~~~~~~~  213 (311)
T 3p1a_A          139 CGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFL----GPRGRCKLGDFGLLVELGTAGAG  213 (311)
T ss_dssp             CCCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CGGGCEEECCCTTCEECC-----
T ss_pred             cCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE----CCCCCEEEccceeeeecccCCCC
Confidence            4778999887653 359999999999999999999999999999999999999    66678999999998765432 22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       214 ~~~~gt~~y~aPE~~~~  230 (311)
T 3p1a_A          214 EVQEGDPRYMAPELLQG  230 (311)
T ss_dssp             -CCCCCGGGCCGGGGGT
T ss_pred             cccCCCccccCHhHhcC
Confidence            34458899999998764

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.81  E-value=8.5e-20  Score=108.87  Aligned_cols=92  Identities=17%  Similarity=0.241  Sum_probs=75.6

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc----
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----   78 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~----   78 (98)
                      +++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+||++.||++...  ..+.++|+|||++......    
T Consensus       135 g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~--~~~~~kl~DFG~a~~~~~~~~~~  211 (364)
T 3op5_A          135 GSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK--NPDQVYLVDYGLAYRYCPEGVHK  211 (364)
T ss_dssp             EEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESS--CTTCEEECCCTTCEESSGGGCCC
T ss_pred             CCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecC--CCCeEEEEECCcceecccCCccc
Confidence            789999998752 369999999999999999999999999999999999999521  4568999999999765321    


Q ss_pred             -----ccceecccccccCcccccC
Q psy11820         79 -----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -----~~~~~~~~~~~~~pe~~~~   97 (98)
                           ......+++.|+|||++.+
T Consensus       212 ~~~~~~~~~~~gt~~y~aPE~~~~  235 (364)
T 3op5_A          212 AYAADPKRCHDGTIEFTSIDAHNG  235 (364)
T ss_dssp             CSSCCSSCCCCCCTTTCCHHHHTT
T ss_pred             ccccCcccccCCCCCccCHHHhCC
Confidence                 1123458999999998765

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.81  E-value=1.9e-19  Score=106.58  Aligned_cols=87  Identities=31%  Similarity=0.581  Sum_probs=75.4

Q ss_pred             hHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cccee
Q psy11820          5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTY   83 (98)
Q Consensus         5 ~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~~~   83 (98)
                      +|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++...... .....
T Consensus       116 ~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll----~~~~~~kL~Dfg~a~~~~~~~~~~~~  189 (335)
T 3dls_A          116 DLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI----AEDFTIKLIDFGSAAYLERGKLFYTF  189 (335)
T ss_dssp             BHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTSCEEECCCTTCEECCTTCCBCEE
T ss_pred             cHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEE----cCCCcEEEeecccceECCCCCceecc
Confidence            8999998754  69999999999999999999999999999999999999    66678999999999876433 23456


Q ss_pred             cccccccCcccccC
Q psy11820         84 LQSRYYRAPEIILG   97 (98)
Q Consensus        84 ~~~~~~~~pe~~~~   97 (98)
                      .+++.|+|||++.+
T Consensus       190 ~gt~~y~aPE~~~~  203 (335)
T 3dls_A          190 CGTIEYCAPEVLMG  203 (335)
T ss_dssp             CSCGGGCCHHHHTT
T ss_pred             CCCccccChhhhcC
Confidence            78999999998764

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.81  E-value=9.9e-20  Score=109.35  Aligned_cols=89  Identities=35%  Similarity=0.610  Sum_probs=73.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc----
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK----   77 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~----   77 (98)
                      ++++|.+++...   .+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|+|||+++....    
T Consensus        93 ~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll----~~~~~~kl~DFG~a~~~~~~~~~  165 (388)
T 3oz6_A           93 METDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL----NAECHVKVADFGLSRSFVNIRRV  165 (388)
T ss_dssp             CSEEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEESSSCCCC
T ss_pred             cCcCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEE----cCCCCEEecCCcccccccccccc
Confidence            457899998764   58899999999999999999999999999999999999    6677899999999875421    


Q ss_pred             -------------------cccceecccccccCcccccC
Q psy11820         78 -------------------AVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 -------------------~~~~~~~~~~~~~~pe~~~~   97 (98)
                                         .......+|++|+|||++.+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  204 (388)
T 3oz6_A          166 TNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG  204 (388)
T ss_dssp             CCCGGGCCC---------------CCCGGGGCCHHHHTT
T ss_pred             cccccccccccccccccccccccCCcccCCcCCHHHhcC
Confidence                               11233578999999998864

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.81  E-value=9.4e-20  Score=111.41  Aligned_cols=92  Identities=25%  Similarity=0.298  Sum_probs=74.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      |.+|+|.+++.......++...+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|+|||++....... 
T Consensus       269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill----~~~~~~kl~DfG~a~~~~~~~-  343 (450)
T 1k9a_A          269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV----SEDNVAKVSDFGLTKEASSTQ-  343 (450)
T ss_dssp             CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTSCEEECCCTTCEECC----
T ss_pred             cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE----CCCCCEEEeeCCCcccccccc-
Confidence            457899999987654457899999999999999999999999999999999999    666789999999987543221 


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....++..|+|||++.+
T Consensus       344 ~~~~~~~~y~aPE~~~~  360 (450)
T 1k9a_A          344 DTGKLPVKWTAPEALRE  360 (450)
T ss_dssp             ---CCCTTTSCHHHHHS
T ss_pred             cCCCCCcceeCHHHhcC
Confidence            22345778999998754

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=9.4e-20  Score=107.29  Aligned_cols=89  Identities=26%  Similarity=0.394  Sum_probs=74.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc--------CCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQL--------GLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~--------~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      .+++|.+++...   .+++..+..++.+++.|+.|+|+.        +++|+|+++.||++    +..+.++|.|||++.
T Consensus       118 ~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill----~~~~~~kl~Dfg~a~  190 (337)
T 3mdy_A          118 ENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV----KKNGTCCIADLGLAV  190 (337)
T ss_dssp             TTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE----CTTSCEEECCCTTCE
T ss_pred             CCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE----CCCCCEEEEeCCCce
Confidence            478999999765   489999999999999999999998        99999999999999    666789999999987


Q ss_pred             eecccc------cceecccccccCcccccC
Q psy11820         74 HVSKAV------CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        74 ~~~~~~------~~~~~~~~~~~~pe~~~~   97 (98)
                      ......      .....+++.|+|||++.+
T Consensus       191 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  220 (337)
T 3mdy_A          191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDE  220 (337)
T ss_dssp             ECC---------CCSSCSCGGGCCHHHHTT
T ss_pred             eeccccccccCCCCCCccCcceeChhhccc
Confidence            653221      124468899999998754

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.81  E-value=8.3e-20  Score=109.03  Aligned_cols=93  Identities=24%  Similarity=0.325  Sum_probs=68.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc-cc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-AV   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~~   79 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+++++|+|+++.||++..  .....++|.|||++..... ..
T Consensus        98 ~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~--~~~~~~kl~Dfg~a~~~~~~~~  173 (361)
T 3uc3_A           98 ASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDG--SPAPRLKICDFGYSKSSVLHSQ  173 (361)
T ss_dssp             CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECS--SSSCCEEECCCCCC--------
T ss_pred             CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC--CCCceEEEeecCccccccccCC
Confidence            35789999997654  6999999999999999999999999999999999999932  1223599999998874322 22


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       174 ~~~~~gt~~y~aPE~~~~  191 (361)
T 3uc3_A          174 PKSTVGTPAYIAPEVLLR  191 (361)
T ss_dssp             -------CTTSCHHHHHC
T ss_pred             CCCCcCCCCcCChhhhcC
Confidence            244568999999998754

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.80  E-value=1.2e-19  Score=107.05  Aligned_cols=94  Identities=27%  Similarity=0.459  Sum_probs=61.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+++++|+|+++.||++... .....++|.|||++......  
T Consensus        88 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~-~~~~~~kl~Dfg~a~~~~~~~~  164 (325)
T 3kn6_A           88 LNGGELFERIKKKK--HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDE-NDNLEIKIIDFGFARLKPPDNQ  164 (325)
T ss_dssp             CCSCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC-----CEEEECCCTTCEECCC---
T ss_pred             cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecC-CCcccEEEeccccceecCCCCC
Confidence            35789999998765  79999999999999999999999999999999999999542 12337999999999765332  


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       165 ~~~~~~~t~~y~aPE~~~~  183 (325)
T 3kn6_A          165 PLKTPCFTLHYAAPELLNQ  183 (325)
T ss_dssp             -------------------
T ss_pred             cccccCCCcCccCHHHhcC
Confidence            2244567899999998754

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.80  E-value=8.5e-20  Score=106.87  Aligned_cols=90  Identities=30%  Similarity=0.430  Sum_probs=69.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|.|||++......   
T Consensus        99 ~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~a~~~~~~~~~  172 (311)
T 3ork_A           99 DGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI----SATNAVKVMDFGIARAIADSGNS  172 (311)
T ss_dssp             CEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----ETTSCEEECCCSCC---------
T ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEE----cCCCCEEEeeccCcccccccccc
Confidence            4789999998654  68999999999999999999999999999999999999    55668999999998765321   


Q ss_pred             --ccceecccccccCcccccC
Q psy11820         79 --VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~~   97 (98)
                        ......+++.|+|||++.+
T Consensus       173 ~~~~~~~~gt~~y~aPE~~~~  193 (311)
T 3ork_A          173 VTQTAAVIGTAQYLSPEQARG  193 (311)
T ss_dssp             ---------CCTTCCHHHHHT
T ss_pred             cccccccCcCcccCCHHHhcC
Confidence              1223457899999998764

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.80  E-value=2.4e-19  Score=105.49  Aligned_cols=90  Identities=33%  Similarity=0.479  Sum_probs=76.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++...   .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||++......  
T Consensus       124 ~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~~~~~~~~~~  196 (321)
T 2c30_A          124 LQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL----TLDGRVKLSDFGFCAQISKDVP  196 (321)
T ss_dssp             CCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECCSSSC
T ss_pred             CCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCcEEEeeeeeeeecccCcc
Confidence            3578999998753   58999999999999999999999999999999999999    66678999999998765432  


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       197 ~~~~~~gt~~y~aPE~~~~  215 (321)
T 2c30_A          197 KRKSLVGTPYWMAPEVISR  215 (321)
T ss_dssp             CBCCCCSCGGGCCHHHHTT
T ss_pred             ccccccCCccccCHhhhcC
Confidence            2244578899999998754

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.80  E-value=2.4e-19  Score=103.94  Aligned_cols=91  Identities=27%  Similarity=0.364  Sum_probs=76.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~   79 (98)
                      .+++|.+++....  .++...+..++.+++.|+.|||+.+  ++|+|+++.||++.   ...+.++|.|||++.......
T Consensus       112 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~---~~~~~~kl~Dfg~~~~~~~~~  186 (290)
T 1t4h_A          112 TSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT---GPTGSVKIGDLGLATLKRASF  186 (290)
T ss_dssp             CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES---STTSCEEECCTTGGGGCCTTS
T ss_pred             CCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE---CCCCCEEEeeCCCcccccccc
Confidence            4789999998754  6899999999999999999999999  99999999999992   145689999999987554444


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       187 ~~~~~~t~~y~aPE~~~~  204 (290)
T 1t4h_A          187 AKAVIGTPEFMAPEMYEE  204 (290)
T ss_dssp             BEESCSSCCCCCGGGGGT
T ss_pred             cccccCCcCcCCHHHHhc
Confidence            455678899999998754

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.80  E-value=1.7e-19  Score=104.28  Aligned_cols=90  Identities=26%  Similarity=0.375  Sum_probs=76.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||++.........
T Consensus        97 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  170 (284)
T 2vgo_A           97 PRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM----GYKGELKIADFGWSVHAPSLRRR  170 (284)
T ss_dssp             TTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECSSSCBC
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE----cCCCCEEEecccccccCcccccc
Confidence            4679999998654  68999999999999999999999999999999999999    66678999999998765443344


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...+++.|+|||++.+
T Consensus       171 ~~~~~~~y~aPE~~~~  186 (284)
T 2vgo_A          171 TMCGTLDYLPPEMIEG  186 (284)
T ss_dssp             CCCSCGGGCCHHHHTT
T ss_pred             cccCCCCcCCHHHhcc
Confidence            5668899999998764

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.80  E-value=9.3e-20  Score=108.25  Aligned_cols=91  Identities=16%  Similarity=0.177  Sum_probs=75.5

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCc--cEEEeeecCceeecccc-
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY--RVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~--~~~l~~~g~~~~~~~~~-   79 (98)
                      +++|.+++.......+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+  .++|+|||++....... 
T Consensus       141 ~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~----~~~~~~~~kl~Dfg~a~~~~~~~~  216 (352)
T 2jii_A          141 GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFV----DPEDQSQVTLAGYGFAFRYCPSGK  216 (352)
T ss_dssp             CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEE----ETTEEEEEEECCGGGCBCSSGGGC
T ss_pred             CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE----cCCCCceEEEecCcceeeccCCCc
Confidence            7899999987633479999999999999999999999999999999999999    4444  79999999987653211 


Q ss_pred             --------cceecccccccCcccccC
Q psy11820         80 --------CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 --------~~~~~~~~~~~~pe~~~~   97 (98)
                              .....+++.|+|||++.+
T Consensus       217 ~~~~~~~~~~~~~gt~~y~aPE~~~~  242 (352)
T 2jii_A          217 HVAYVEGSRSPHEGDLEFISMDLHKG  242 (352)
T ss_dssp             CCCCCTTSSCTTCSCTTTCCHHHHTT
T ss_pred             cccccccccccccCCccccCHHHHcc
Confidence                    123367889999998765

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.80  E-value=1.2e-19  Score=104.72  Aligned_cols=92  Identities=23%  Similarity=0.294  Sum_probs=76.6

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+++|.+++.......+++..+..++.|++.|+.|||+.+++|+|+++.||++    ...+.++|.|||++...... ..
T Consensus       103 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  178 (284)
T 2a19_B          103 DKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL----VDTKQVKIGDFGLVTSLKNDGKR  178 (284)
T ss_dssp             CSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----EETTEEEECCCTTCEESSCCSCC
T ss_pred             CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEE----cCCCCEEECcchhheeccccccc
Confidence            46799999976544578999999999999999999999999999999999999    45568999999998765432 22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       179 ~~~~~~~~y~aPE~~~~  195 (284)
T 2a19_B          179 TRSKGTLRYMSPEQISS  195 (284)
T ss_dssp             CCCCSCCTTSCHHHHHC
T ss_pred             cccCCcccccChhhhcc
Confidence            34567889999998754

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.80  E-value=1.2e-19  Score=104.78  Aligned_cols=90  Identities=24%  Similarity=0.348  Sum_probs=72.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.+++.|||++.........
T Consensus        92 ~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili----~~~~~~~l~Dfg~~~~~~~~~~~  165 (279)
T 3fdn_A           92 PLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL----GSAGELKIADFGWSVHAPSSRRT  165 (279)
T ss_dssp             TTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEE----CTTSCEEECSCCEESCC------
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEE----cCCCCEEEEeccccccCCccccc
Confidence            4689999987654  68999999999999999999999999999999999999    66778999999988655443334


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...+++.|+|||++.+
T Consensus       166 ~~~~~~~y~aPE~~~~  181 (279)
T 3fdn_A          166 DLCGTLDYLPPEMIEG  181 (279)
T ss_dssp             --CCCCTTCCHHHHTT
T ss_pred             ccCCCCCccCHhHhcc
Confidence            5568899999998764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.80  E-value=3.1e-19  Score=103.60  Aligned_cols=94  Identities=21%  Similarity=0.344  Sum_probs=75.5

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCC-CCCccEEEeeecCceeecccc--
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV-RQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~-~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      +++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.||++.... .....++|+|||++.......  
T Consensus        89 ~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~  167 (298)
T 1csn_A           89 GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTK  167 (298)
T ss_dssp             CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTC
T ss_pred             CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccccc
Confidence            789999998653 3589999999999999999999999999999999999994432 123349999999997654321  


Q ss_pred             -------cceecccccccCcccccC
Q psy11820         80 -------CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 -------~~~~~~~~~~~~pe~~~~   97 (98)
                             .....+++.|+|||++.+
T Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~  192 (298)
T 1csn_A          168 QHIPYREKKNLSGTARYMSINTHLG  192 (298)
T ss_dssp             CBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred             ccccccCccCCCCCcccCCchhhcC
Confidence                   234468899999998764

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.80  E-value=2.6e-19  Score=107.51  Aligned_cols=93  Identities=18%  Similarity=0.211  Sum_probs=76.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      |.+++|.+++.......+++..+..++.|++.|+.|||+++++|+||++.||++    +..+.+++.|||.+......  
T Consensus       108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll----~~~~~~kl~dfg~~~~~~~~~~  183 (389)
T 3gni_B          108 MAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI----SVDGKVYLSGLRSNLSMISHGQ  183 (389)
T ss_dssp             CTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCGGGCEECEETTE
T ss_pred             cCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEcccccceeeccccc
Confidence            457899999987755579999999999999999999999999999999999999    66778999999987643211  


Q ss_pred             -------ccceecccccccCcccccC
Q psy11820         79 -------VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -------~~~~~~~~~~~~~pe~~~~   97 (98)
                             ......+++.|+|||++.+
T Consensus       184 ~~~~~~~~~~~~~gt~~y~aPE~~~~  209 (389)
T 3gni_B          184 RQRVVHDFPKYSVKVLPWLSPEVLQQ  209 (389)
T ss_dssp             ECSCBCCCCTTCTTTGGGSCHHHHST
T ss_pred             cccccccccccccccccccCHHHHhc
Confidence                   1122367888999999865

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.80  E-value=3.4e-19  Score=106.92  Aligned_cols=92  Identities=23%  Similarity=0.296  Sum_probs=75.2

Q ss_pred             cchhHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEe
Q psy11820          2 LEQNLYDFLKQNKF--------------SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI   67 (98)
Q Consensus         2 ~~~~L~~~~~~~~~--------------~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~   67 (98)
                      .+++|.+++.....              ..+++..+..++.|++.|+.|||+.+++|+||++.||++    +..+.++|+
T Consensus       158 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kL~  233 (382)
T 3tt0_A          158 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV----TEDNVMKIA  233 (382)
T ss_dssp             TTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEEC
T ss_pred             CCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEE----cCCCcEEEc
Confidence            47899999986541              358999999999999999999999999999999999999    666789999


Q ss_pred             eecCceeeccc----ccceecccccccCcccccC
Q psy11820         68 DFGSASHVSKA----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        68 ~~g~~~~~~~~----~~~~~~~~~~~~~pe~~~~   97 (98)
                      |||++......    ......+++.|+|||++.+
T Consensus       234 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  267 (382)
T 3tt0_A          234 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD  267 (382)
T ss_dssp             SCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHS
T ss_pred             ccCcccccccccccccccCCCCCcceeCHHHhcC
Confidence            99998765322    1223346778999998754

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.80  E-value=1.6e-19  Score=108.71  Aligned_cols=89  Identities=28%  Similarity=0.438  Sum_probs=73.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++....  .+++..+..++.|++.||.|||+.+++|+||++.||++    . .+.++|+|||++......   
T Consensus       138 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll----~-~~~~kl~DFG~a~~~~~~~~~  210 (390)
T 2zmd_A          138 GNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI----V-DGMLKLIDFGIANQMQPDTTS  210 (390)
T ss_dssp             CSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEE----S-SSCEEECCCSSSCCC------
T ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE----E-CCeEEEEecCccccccCCCcc
Confidence            5689999998765  68888999999999999999999999999999999999    2 257999999998765322   


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+++.|+|||++.+
T Consensus       211 ~~~~~~~gt~~y~aPE~~~~  230 (390)
T 2zmd_A          211 VVKDSQVGAVNYMPPEAIKD  230 (390)
T ss_dssp             ---CCSCCCGGGCCHHHHHC
T ss_pred             ccCCCCCcCCCccChHHhhh
Confidence             1234568999999998753

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.80  E-value=4e-19  Score=104.48  Aligned_cols=95  Identities=41%  Similarity=0.618  Sum_probs=76.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCC---------------CccEEE
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ---------------PYRVKV   66 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~---------------~~~~~l   66 (98)
                      .+++|.+++.......++...+..++.|++.|+.|+|+++++|+|+++.||++......               ...+++
T Consensus        99 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl  178 (339)
T 1z57_A           99 LGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKV  178 (339)
T ss_dssp             CCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEE
T ss_pred             CCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceE
Confidence            37899999987765578999999999999999999999999999999999999432100               456899


Q ss_pred             eeecCceeecccccceecccccccCcccccC
Q psy11820         67 IDFGSASHVSKAVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        67 ~~~g~~~~~~~~~~~~~~~~~~~~~pe~~~~   97 (98)
                      .|||++...... .....+++.|+|||++.+
T Consensus       179 ~Dfg~~~~~~~~-~~~~~gt~~y~aPE~~~~  208 (339)
T 1z57_A          179 VDFGSATYDDEH-HSTLVSTRHYRAPEVILA  208 (339)
T ss_dssp             CCCSSCEETTSC-CCSSCSCGGGCCHHHHTT
T ss_pred             eeCcccccCccc-cccccCCccccChHHhhC
Confidence            999998764332 234567899999998764

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.80  E-value=1.9e-19  Score=106.07  Aligned_cols=89  Identities=20%  Similarity=0.309  Sum_probs=74.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc---------CCcccCCCCCcEEEecCCCCCccEEEeeecCc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQL---------GLIHADLKPENIMLVDPVRQPYRVKVIDFGSA   72 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---------~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~   72 (98)
                      .+++|.+++....   .++..+..++.|++.|+.|||+.         +++|+|+++.||++    ...+.++|+|||++
T Consensus        95 ~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill----~~~~~~kL~DFG~a  167 (336)
T 3g2f_A           95 PNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV----KNDGTCVISDFGLS  167 (336)
T ss_dssp             TTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEE----CTTSCEEECCCTTC
T ss_pred             CCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEE----cCCCcEEEeeccce
Confidence            5789999998654   58888999999999999999999         99999999999999    66678999999999


Q ss_pred             eeeccc----------ccceecccccccCcccccC
Q psy11820         73 SHVSKA----------VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        73 ~~~~~~----------~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......          ......+++.|+|||++.+
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  202 (336)
T 3g2f_A          168 MRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEG  202 (336)
T ss_dssp             EECSSSSCC---------CCTTSCGGGCCHHHHTT
T ss_pred             eecccccccCccccccccccCCCccceeCchhhcC
Confidence            765321          1123468899999998864

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.80  E-value=1.6e-19  Score=106.21  Aligned_cols=89  Identities=27%  Similarity=0.414  Sum_probs=75.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc----------CCcccCCCCCcEEEecCCCCCccEEEeeecC
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQL----------GLIHADLKPENIMLVDPVRQPYRVKVIDFGS   71 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~----------~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~   71 (98)
                      .+++|.+++...   .+++..+..++.|++.|+.|||+.          +++|+|+++.||++    +..+.++|+|||+
T Consensus       105 ~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill----~~~~~~kL~DFg~  177 (322)
T 3soc_A          105 EKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL----KNNLTACIADFGL  177 (322)
T ss_dssp             TTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEE----CTTCCEEECCCTT
T ss_pred             CCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEE----CCCCeEEEccCCc
Confidence            578999999864   489999999999999999999999          99999999999999    6667899999999


Q ss_pred             ceeecccc----cceecccccccCcccccC
Q psy11820         72 ASHVSKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        72 ~~~~~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      +.......    .....+++.|+|||++.+
T Consensus       178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  207 (322)
T 3soc_A          178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEG  207 (322)
T ss_dssp             CEEECTTSCCCCCTTCCCCGGGCCHHHHTT
T ss_pred             ccccccccCccccccCccCccccCHhhccc
Confidence            97654321    223468899999998764

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.80  E-value=2.5e-19  Score=106.54  Aligned_cols=94  Identities=29%  Similarity=0.455  Sum_probs=68.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++... ...+.++|.|||++...... .
T Consensus       130 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~-~~~~~~kl~Dfg~a~~~~~~~~  206 (349)
T 2w4o_A          130 VTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATP-APDAPLKIADFGLSKIVEHQVL  206 (349)
T ss_dssp             CCSCBHHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSS-STTCCEEECCCC----------
T ss_pred             CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecC-CCCCCEEEccCccccccCcccc
Confidence            35789999997654  68999999999999999999999999999999999999432 12568999999998765432 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       207 ~~~~~gt~~y~aPE~~~~  224 (349)
T 2w4o_A          207 MKTVCGTPGYCAPEILRG  224 (349)
T ss_dssp             ------CGGGSCHHHHTT
T ss_pred             cccccCCCCccCHHHhcC
Confidence            244568899999998764

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.80  E-value=6.4e-20  Score=108.08  Aligned_cols=90  Identities=27%  Similarity=0.476  Sum_probs=75.3

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++......   
T Consensus        88 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll----~~~~~~kl~Dfg~a~~~~~~~~~  161 (323)
T 3tki_A           88 SGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRE  161 (323)
T ss_dssp             TTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCTTCEECEETTEE
T ss_pred             CCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEE----eCCCCEEEEEeeccceeccCCcc
Confidence            4678888887544  68999999999999999999999999999999999999    66678999999999765321   


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+++.|+|||++.+
T Consensus       162 ~~~~~~~gt~~y~aPE~~~~  181 (323)
T 3tki_A          162 RLLNKMCGTLPYVAPELLKR  181 (323)
T ss_dssp             CCBCSCCSCGGGSCHHHHHC
T ss_pred             cccCCCccCcCccCcHHhcc
Confidence             2234568899999998754

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.80  E-value=3.3e-19  Score=109.75  Aligned_cols=94  Identities=28%  Similarity=0.510  Sum_probs=75.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|++|.||++... ...+.++|.|||++...... .
T Consensus       103 ~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~-~~~~~~kl~Dfg~a~~~~~~~~  179 (486)
T 3mwu_A          103 YTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK-EKDCDIKIIDFGLSTCFQQNTK  179 (486)
T ss_dssp             CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSS-STTCCEEECSCSCTTTBCCC--
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecC-CCCCCEEEEECCcCeECCCCCc
Confidence            35789999887654  69999999999999999999999999999999999999432 23457999999998755332 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       180 ~~~~~gt~~y~aPE~~~~  197 (486)
T 3mwu_A          180 MKDRIGTAYYIAPEVLRG  197 (486)
T ss_dssp             --CCTTGGGGCCGGGGGS
T ss_pred             cCCCcCCCCCCCHHHhCC
Confidence            345578999999999865

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.80  E-value=2.7e-19  Score=105.03  Aligned_cols=92  Identities=29%  Similarity=0.390  Sum_probs=72.9

Q ss_pred             cchhHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          2 LEQNLYDFLKQNKF-SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      .+++|.+++..... ...++..+..++.|++.|+.|||+++++|+|+++.||++    ...+.++|.|||++......  
T Consensus       144 ~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kL~DfG~a~~~~~~~~  219 (332)
T 3qd2_B          144 RKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFF----TMDDVVKVGDFGLVTAMDQDEE  219 (332)
T ss_dssp             CSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEECSCC--
T ss_pred             CCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEE----eCCCCEEEeecCcccccccchh
Confidence            47899999986542 234556688999999999999999999999999999999    66678999999998765432  


Q ss_pred             ------------ccceecccccccCcccccC
Q psy11820         79 ------------VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ------------~~~~~~~~~~~~~pe~~~~   97 (98)
                                  ......+++.|+|||++.+
T Consensus       220 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  250 (332)
T 3qd2_B          220 EQTVLTPMPAYATHTGQVGTKLYMSPEQIHG  250 (332)
T ss_dssp             ------------CCCSCC-CGGGSCHHHHHC
T ss_pred             hccccccccccccccccCCCcCccChHHhcC
Confidence                        1123468899999998764

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.79  E-value=3e-19  Score=104.80  Aligned_cols=95  Identities=24%  Similarity=0.347  Sum_probs=77.4

Q ss_pred             cchhHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          2 LEQNLYDFLKQNK-FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      .+++|.+++.... ...+++..+..++.|++.|+.|||+.+++|+|+++.||++....+....++|.|||++...... .
T Consensus        92 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~  171 (319)
T 4euu_A           92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ  171 (319)
T ss_dssp             TTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCC
T ss_pred             CCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCc
Confidence            4789999997643 2238999999999999999999999999999999999998554455667999999999876433 2


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....+++.|+|||++.
T Consensus       172 ~~~~~gt~~y~aPE~~~  188 (319)
T 4euu_A          172 FVSLYGTEEYLHPDMYE  188 (319)
T ss_dssp             BCCCCSCGGGCCHHHHH
T ss_pred             eeecccCCCccCHHHhh
Confidence            23456889999999864

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=3.7e-19  Score=106.41  Aligned_cols=88  Identities=33%  Similarity=0.604  Sum_probs=75.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      ++++|.+++...   .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|+|||++...... ..
T Consensus       112 ~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~~~~~~-~~  183 (367)
T 1cm8_A          112 MGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV----NEDCELKILDFGLARQADSE-MT  183 (367)
T ss_dssp             CSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEECCSS-CC
T ss_pred             CCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEE----cCCCCEEEEeeecccccccc-cC
Confidence            368899999763   58999999999999999999999999999999999999    66778999999999865432 23


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...++++|+|||++.+
T Consensus       184 ~~~~t~~y~aPE~~~~  199 (367)
T 1cm8_A          184 GYVVTRWYRAPEVILN  199 (367)
T ss_dssp             SSCSCGGGCCTHHHHT
T ss_pred             cCcCCCCcCCHHHHhC
Confidence            4567899999998764

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.79  E-value=2.2e-19  Score=106.43  Aligned_cols=88  Identities=30%  Similarity=0.464  Sum_probs=71.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.||++.     .+.++|+|||++......   
T Consensus        91 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-----~~~~kl~DFG~a~~~~~~~~~  163 (343)
T 3dbq_A           91 GNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-----DGMLKLIDFGIANQMQPDTTS  163 (343)
T ss_dssp             CSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-----TTEEEECCCSSSCCC------
T ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-----CCcEEEeecccccccCccccc
Confidence            5789999998765  789999999999999999999999999999999999993     346999999998765322   


Q ss_pred             -ccceecccccccCccccc
Q psy11820         79 -VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~   96 (98)
                       ......+++.|+|||++.
T Consensus       164 ~~~~~~~gt~~y~aPE~~~  182 (343)
T 3dbq_A          164 VVKDSQVGTVNYMPPEAIK  182 (343)
T ss_dssp             ------CCCCSSCCHHHHH
T ss_pred             ccCCCCcCCcCcCCHHHHh
Confidence             123456899999999874

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.79  E-value=3.4e-19  Score=107.32  Aligned_cols=94  Identities=24%  Similarity=0.419  Sum_probs=76.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++..  ...+.++|+|||++...... .
T Consensus       130 ~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~--~~~~~vkL~DFG~a~~~~~~~~  206 (387)
T 1kob_A          130 LSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET--KKASSVKIIDFGLATKLNPDEI  206 (387)
T ss_dssp             CCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS--TTCCCEEECCCTTCEECCTTSC
T ss_pred             CCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEec--CCCCceEEEecccceecCCCcc
Confidence            35789999987543 35899999999999999999999999999999999999932  12457999999999876433 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       207 ~~~~~gt~~y~aPE~~~~  224 (387)
T 1kob_A          207 VKVTTATAEFAAPEIVDR  224 (387)
T ss_dssp             EEEECSSGGGCCHHHHTT
T ss_pred             eeeeccCCCccCchhccC
Confidence            344568999999998764

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.79  E-value=1.8e-19  Score=105.96  Aligned_cols=89  Identities=33%  Similarity=0.533  Sum_probs=75.5

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccce
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT   82 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~   82 (98)
                      +++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++..   ..+.++|.|||++..........
T Consensus       133 ~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~---~~~~~kL~Dfg~~~~~~~~~~~~  207 (320)
T 3a99_A          133 VQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL---NRGELKLIDFGSGALLKDTVYTD  207 (320)
T ss_dssp             EEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET---TTTEEEECCCTTCEECCSSCBCC
T ss_pred             CccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeC---CCCCEEEeeCccccccccccccC
Confidence            378999998754  6899999999999999999999999999999999999931   45689999999998765544455


Q ss_pred             ecccccccCccccc
Q psy11820         83 YLQSRYYRAPEIIL   96 (98)
Q Consensus        83 ~~~~~~~~~pe~~~   96 (98)
                      ..+++.|+|||++.
T Consensus       208 ~~gt~~y~aPE~~~  221 (320)
T 3a99_A          208 FDGTRVYSPPEWIR  221 (320)
T ss_dssp             CCSCGGGSCHHHHH
T ss_pred             CCCCccCCChHHhc
Confidence            66889999999865

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.79  E-value=6.7e-19  Score=102.12  Aligned_cols=93  Identities=23%  Similarity=0.330  Sum_probs=75.4

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc---
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV---   79 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~---   79 (98)
                      +++|.+++.... ..+++..+..++.|++.|+.|||+++++|+|+++.||++... ...+.++|+|||++.......   
T Consensus        88 ~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~-~~~~~~kl~Dfg~~~~~~~~~~~~  165 (296)
T 3uzp_A           88 GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG-KKGNLVYIIDFGLAKKYRDARTHQ  165 (296)
T ss_dssp             CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCG-GGTTCEEECCCTTCEECBCTTTCC
T ss_pred             CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecC-CCCCeEEEeeCCCccccccccccc
Confidence            789999997543 368999999999999999999999999999999999999321 244579999999987654321   


Q ss_pred             ------cceecccccccCcccccC
Q psy11820         80 ------CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ------~~~~~~~~~~~~pe~~~~   97 (98)
                            .....+++.|+|||++.+
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~  189 (296)
T 3uzp_A          166 HIPYRENKNLTGTARYASINTHLG  189 (296)
T ss_dssp             BCCCCCSCCCCSCTTTCCHHHHTT
T ss_pred             ccccccccccccccccCChhhhcC
Confidence                  134568899999998765

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.79  E-value=7.4e-20  Score=109.61  Aligned_cols=88  Identities=23%  Similarity=0.261  Sum_probs=71.0

Q ss_pred             cchhHHHHHhhCCCCCCC-------HHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820          2 LEQNLYDFLKQNKFSPLP-------LKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~-------~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ++|+|.+++....  .++       +..+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|+|||++..
T Consensus       182 ~~g~L~~~l~~~~--~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll----~~~~~~kL~DFG~a~~  255 (377)
T 3byv_A          182 MQSNLQTFGEVLL--SHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL----DQRGGVFLTGFEHLVR  255 (377)
T ss_dssp             CSEEHHHHHHHHH--HTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTCCEEECCGGGCEE
T ss_pred             cCCCHHHHHHhcc--ccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEEechhhee
Confidence            3689999998643  243       37778899999999999999999999999999999    6667899999999876


Q ss_pred             ecccccceecccccccCcccccC
Q psy11820         75 VSKAVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        75 ~~~~~~~~~~~~~~~~~pe~~~~   97 (98)
                      ... ......+ +.|+|||++.+
T Consensus       256 ~~~-~~~~~~g-~~y~aPE~~~~  276 (377)
T 3byv_A          256 DGA-RVVSSVS-RGFEPPELEAR  276 (377)
T ss_dssp             TTC-EEECCCC-TTCCCHHHHHH
T ss_pred             cCC-cccCCCC-cCccChhhhcc
Confidence            433 2234456 88999998753

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.79  E-value=1.9e-19  Score=105.26  Aligned_cols=90  Identities=30%  Similarity=0.465  Sum_probs=76.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++..   ..+.+++.|||++.........
T Consensus       122 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~---~~~~~kl~dfg~~~~~~~~~~~  196 (312)
T 2iwi_A          122 PAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL---RRGCAKLIDFGSGALLHDEPYT  196 (312)
T ss_dssp             SEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEET---TTTEEEECCCSSCEECCSSCBC
T ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeC---CCCeEEEEEcchhhhcccCccc
Confidence            5789999998754  6899999999999999999999999999999999999931   4568999999998876554445


Q ss_pred             eecccccccCccccc
Q psy11820         82 TYLQSRYYRAPEIIL   96 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~   96 (98)
                      ...+++.|+|||++.
T Consensus       197 ~~~~~~~y~aPE~~~  211 (312)
T 2iwi_A          197 DFDGTRVYSPPEWIS  211 (312)
T ss_dssp             CCCSCTTTSCHHHHH
T ss_pred             ccCCcccccCceeee
Confidence            566889999999864

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.79  E-value=5.4e-19  Score=104.53  Aligned_cols=95  Identities=41%  Similarity=0.660  Sum_probs=76.6

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCC---------------CCCccEEE
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV---------------RQPYRVKV   66 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~---------------~~~~~~~l   66 (98)
                      .+++|.+++.......+++..+..++.|++.|+.|||+.+++|+|+++.||++....               .....++|
T Consensus       104 ~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl  183 (355)
T 2eu9_A          104 LGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV  183 (355)
T ss_dssp             CCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEE
T ss_pred             cCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEE
Confidence            367888888776555799999999999999999999999999999999999994321               23467999


Q ss_pred             eeecCceeecccccceecccccccCcccccC
Q psy11820         67 IDFGSASHVSKAVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        67 ~~~g~~~~~~~~~~~~~~~~~~~~~pe~~~~   97 (98)
                      +|||++...... .....+++.|+|||++.+
T Consensus       184 ~Dfg~~~~~~~~-~~~~~gt~~y~aPE~~~~  213 (355)
T 2eu9_A          184 ADFGSATFDHEH-HTTIVATRHYRPPEVILE  213 (355)
T ss_dssp             CCCTTCEETTSC-CCSSCSCGGGCCHHHHTT
T ss_pred             eecCcccccccc-ccCCcCCCcccCCeeeec
Confidence            999998764332 234568899999998764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.79  E-value=2.9e-19  Score=104.76  Aligned_cols=93  Identities=22%  Similarity=0.353  Sum_probs=68.3

Q ss_pred             CcchhHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecCCCCCccEEEeeecCceeecc
Q psy11820          1 MLEQNLYDFLKQNKF-SPLPLKYIRPILHQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK   77 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~--~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~   77 (98)
                      +.+++|.+++..... ..+++..+..++.|++.|+.|||+.+  ++|+|+++.||++    +..+.++|.|||++.....
T Consensus       116 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll----~~~~~~kL~Dfg~a~~~~~  191 (309)
T 3p86_A          116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV----DKKYTVKVCDFGLSRLKAS  191 (309)
T ss_dssp             CTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEE----CTTCCEEECCCC-------
T ss_pred             CCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEE----eCCCcEEECCCCCCccccc
Confidence            357899999976431 13889999999999999999999999  9999999999999    6677899999999875433


Q ss_pred             c--ccceecccccccCcccccC
Q psy11820         78 A--VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 ~--~~~~~~~~~~~~~pe~~~~   97 (98)
                      .  ......+++.|+|||++.+
T Consensus       192 ~~~~~~~~~gt~~y~aPE~~~~  213 (309)
T 3p86_A          192 TFLSSKSAAGTPEWMAPEVLRD  213 (309)
T ss_dssp             ----------CCTTSCHHHHTT
T ss_pred             cccccccCCCCccccChhhhcC
Confidence            2  2234568899999998764

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.79  E-value=3.7e-19  Score=106.33  Aligned_cols=90  Identities=32%  Similarity=0.531  Sum_probs=76.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||++...... .
T Consensus       182 ~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~----~~~~~ikl~DfG~~~~~~~~~~  255 (365)
T 2y7j_A          182 MRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL----DDNMQIRLSDFGFSCHLEPGEK  255 (365)
T ss_dssp             CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCTTCEECCTTCC
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCCEEEEecCcccccCCCcc
Confidence            35789999998654  68999999999999999999999999999999999999    66778999999998765432 2


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....+++.|+|||++.
T Consensus       256 ~~~~~gt~~y~aPE~~~  272 (365)
T 2y7j_A          256 LRELCGTPGYLAPEILK  272 (365)
T ss_dssp             BCCCCSCGGGCCHHHHH
T ss_pred             cccCCCCCCccChhhcc
Confidence            34567889999999874

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.79  E-value=4.6e-19  Score=104.14  Aligned_cols=94  Identities=32%  Similarity=0.457  Sum_probs=76.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++.........+++.|||++...... ..
T Consensus        98 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~  175 (321)
T 2a2a_A           98 SGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF  175 (321)
T ss_dssp             CSCBHHHHHHTCS--CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCC
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccccc
Confidence            4789999998654  68999999999999999999999999999999999999432222227999999999766433 22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       176 ~~~~gt~~y~aPE~~~~  192 (321)
T 2a2a_A          176 KNIFGTPEFVAPEIVNY  192 (321)
T ss_dssp             CCCCSCGGGCCHHHHTT
T ss_pred             cccCCCCCccCcccccC
Confidence            34568899999998764

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.79  E-value=3.2e-19  Score=110.20  Aligned_cols=92  Identities=23%  Similarity=0.288  Sum_probs=75.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      |.+|+|.+++.......++...+..++.|++.|+.|||+++++|+||++.||++    +..+.++|+|||++........
T Consensus       298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll----~~~~~~kl~DFG~a~~~~~~~~  373 (495)
T 1opk_A          298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV----GENHLVKVADFGLSRLMTGDTY  373 (495)
T ss_dssp             CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CGGGCEEECCTTCEECCTTCCE
T ss_pred             cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEE----CCCCcEEEeecccceeccCCce
Confidence            457899999987655568999999999999999999999999999999999999    6667899999999986543211


Q ss_pred             ---ceecccccccCccccc
Q psy11820         81 ---NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ---~~~~~~~~~~~pe~~~   96 (98)
                         ....++..|+|||++.
T Consensus       374 ~~~~~~~~~~~y~aPE~~~  392 (495)
T 1opk_A          374 TAHAGAKFPIKWTAPESLA  392 (495)
T ss_dssp             ECCTTCCCCGGGCCHHHHH
T ss_pred             eecCCCcCCcceeCHhHHh
Confidence               1223456799999875

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.79  E-value=8.9e-20  Score=110.52  Aligned_cols=88  Identities=24%  Similarity=0.312  Sum_probs=70.6

Q ss_pred             cchhHHHHHh-----hCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec
Q psy11820          2 LEQNLYDFLK-----QNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS   76 (98)
Q Consensus         2 ~~~~L~~~~~-----~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~   76 (98)
                      .+++|.+++.     ......+++..+..++.|++.|+.|||+.+++|+||++.||++    +..+.++|+|||++....
T Consensus       187 ~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl----~~~~~~kL~DFG~a~~~~  262 (413)
T 3dzo_A          187 MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL----DQRGGVFLTGFEHLVRDG  262 (413)
T ss_dssp             CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTCCEEECCGGGCEETT
T ss_pred             hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEE----ecCCeEEEEeccceeecC
Confidence            4578888874     2222346777888899999999999999999999999999999    666789999999987654


Q ss_pred             ccccceecccccccCcccc
Q psy11820         77 KAVCNTYLQSRYYRAPEII   95 (98)
Q Consensus        77 ~~~~~~~~~~~~~~~pe~~   95 (98)
                      .. .....+ +.|+|||++
T Consensus       263 ~~-~~~~~g-~~y~aPE~~  279 (413)
T 3dzo_A          263 AS-AVSPIG-RGFAPPETT  279 (413)
T ss_dssp             EE-ECCCCC-TTTCCHHHH
T ss_pred             Cc-cccCCC-CceeCchhh
Confidence            33 234456 899999987

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.79  E-value=7.3e-19  Score=103.05  Aligned_cols=91  Identities=30%  Similarity=0.514  Sum_probs=74.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      +.++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++......  .
T Consensus       101 ~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~----~~~~~~kl~Dfg~a~~~~~~~~~  175 (311)
T 3niz_A          101 MEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI----NSDGALKLADFGLARAFGIPVRS  175 (311)
T ss_dssp             CSEEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEETTSCCC-
T ss_pred             CCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEE----CCCCCEEEccCcCceecCCCccc
Confidence            3468888887654 358999999999999999999999999999999999999    66678999999999865422  2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       176 ~~~~~~t~~y~aPE~~~~  193 (311)
T 3niz_A          176 YTHEVVTLWYRAPDVLMG  193 (311)
T ss_dssp             --CCCCCCTTCCHHHHTT
T ss_pred             ccCCcccCCcCCHHHhcC
Confidence            234467899999998754

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.78  E-value=7.9e-19  Score=104.41  Aligned_cols=96  Identities=21%  Similarity=0.240  Sum_probs=75.2

Q ss_pred             CcchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc
Q psy11820          1 MLEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~   78 (98)
                      +.+++|.+++...  ....+++..+..++.|++.|+.|||+++++|+|+++.||++... .....+++.|||++......
T Consensus       108 ~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~-~~~~~vkl~Dfg~a~~~~~~  186 (351)
T 3c0i_A          108 MDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASK-ENSAPVKLGGFGVAIQLGES  186 (351)
T ss_dssp             CSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSS-STTCCEEECCCTTCEECCTT
T ss_pred             CCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecC-CCCCcEEEecCcceeEecCC
Confidence            3468998877543  22358999999999999999999999999999999999999432 12345999999999876433


Q ss_pred             c--cceecccccccCcccccC
Q psy11820         79 V--CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~--~~~~~~~~~~~~pe~~~~   97 (98)
                      .  .....+++.|+|||++.+
T Consensus       187 ~~~~~~~~gt~~y~aPE~~~~  207 (351)
T 3c0i_A          187 GLVAGGRVGTPHFMAPEVVKR  207 (351)
T ss_dssp             SCBCCCCCSCGGGCCHHHHTT
T ss_pred             CeeecCCcCCcCccCHHHHcC
Confidence            2  234568999999999764

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.78  E-value=6.2e-19  Score=108.25  Aligned_cols=87  Identities=37%  Similarity=0.692  Sum_probs=67.8

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-ccc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCN   81 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~   81 (98)
                      +++|.+.+..    .+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++...... ...
T Consensus       150 ~~~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll----~~~~~~kl~DFG~a~~~~~~~~~~  221 (464)
T 3ttj_A          150 DANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAGTSFMMT  221 (464)
T ss_dssp             SEEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECCCCCC-----CCCC-
T ss_pred             CCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEE----eCCCCEEEEEEEeeeecCCCcccC
Confidence            4567777642    48899999999999999999999999999999999999    66778999999999866443 234


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...++++|+|||++.+
T Consensus       222 ~~~gt~~y~aPE~~~~  237 (464)
T 3ttj_A          222 PYVVTRYYRAPEVILG  237 (464)
T ss_dssp             ---CCCTTCCHHHHTT
T ss_pred             CCcccccccCHHHHcC
Confidence            5678999999999865

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.78  E-value=1.1e-18  Score=102.46  Aligned_cols=91  Identities=31%  Similarity=0.514  Sum_probs=76.8

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-ccc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCN   81 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~   81 (98)
                      +++|.+++.......+++..+..++.|++.|+.|+|+.+++|+|+++.||++    ...+.++|.|||.+...... ...
T Consensus       102 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili----~~~~~~kl~Dfg~~~~~~~~~~~~  177 (326)
T 1blx_A          102 DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV----TSSGQIKLADFGLARIYSFQMALT  177 (326)
T ss_dssp             SCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECSCCSCCCCCGGGGGC
T ss_pred             CCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEE----cCCCCEEEecCcccccccCCCCcc
Confidence            5799999987665568999999999999999999999999999999999999    66678999999998765432 223


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...+++.|+|||++.+
T Consensus       178 ~~~~~~~y~aPE~~~~  193 (326)
T 1blx_A          178 SVVVTLWYRAPEVLLQ  193 (326)
T ss_dssp             CCCCCCTTCCHHHHTT
T ss_pred             ccccccceeCHHHHhc
Confidence            4567889999998754

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.78  E-value=1.5e-19  Score=106.49  Aligned_cols=92  Identities=25%  Similarity=0.347  Sum_probs=73.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      +.+|+|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|+|||++....... 
T Consensus        98 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll----~~~~~~kl~Dfg~a~~~~~~~~  172 (327)
T 3poz_A           98 MPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEK  172 (327)
T ss_dssp             CTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----EETTEEEECCTTHHHHHTTTCC
T ss_pred             cCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEE----CCCCCEEEccCcceeEccCCcc
Confidence            46789999998754 368999999999999999999999999999999999999    555689999999987653221 


Q ss_pred             ---cceecccccccCcccccC
Q psy11820         80 ---CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ---~~~~~~~~~~~~pe~~~~   97 (98)
                         .....+++.|+|||.+.+
T Consensus       173 ~~~~~~~~~t~~y~aPE~~~~  193 (327)
T 3poz_A          173 EYHAEGGKVPIKWMALESILH  193 (327)
T ss_dssp             -------CCCGGGSCHHHHHH
T ss_pred             cccccCCCccccccChHHhcc
Confidence               122345678999998753

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.78  E-value=1.8e-19  Score=106.03  Aligned_cols=91  Identities=23%  Similarity=0.358  Sum_probs=72.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|+|||++......  
T Consensus        96 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~----~~~~~~kl~Dfg~a~~~~~~~~  170 (325)
T 3kex_A           96 LPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL----KSPSQVQVADFGVADLLPPDDK  170 (325)
T ss_dssp             CTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEE----SSSSCEEECSCSGGGGSCCCTT
T ss_pred             CCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEE----CCCCeEEECCCCcccccCcccc
Confidence            45789999997642 368889999999999999999999999999999999999    66678999999998765322  


Q ss_pred             --ccceecccccccCccccc
Q psy11820         79 --VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~   96 (98)
                        ......++..|+|||++.
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~  190 (325)
T 3kex_A          171 QLLYSEAKTPIKWMALESIH  190 (325)
T ss_dssp             CCC-----CCTTTSCHHHHH
T ss_pred             cccccCCCCcccccChHHhc
Confidence              123345667899999875

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.78  E-value=2.6e-19  Score=106.30  Aligned_cols=75  Identities=31%  Similarity=0.320  Sum_probs=62.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc----ccceecccccccCcc
Q psy11820         18 LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPE   93 (98)
Q Consensus        18 l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~----~~~~~~~~~~~~~pe   93 (98)
                      +++..+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|+|||++......    ......+++.|+|||
T Consensus       190 l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll----~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE  265 (359)
T 3vhe_A          190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE  265 (359)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE----cCCCcEEEEeccceeeecccccchhccccCCCceeEChh
Confidence            8889999999999999999999999999999999999    66678999999998754321    123345778899999


Q ss_pred             ccc
Q psy11820         94 IIL   96 (98)
Q Consensus        94 ~~~   96 (98)
                      ++.
T Consensus       266 ~~~  268 (359)
T 3vhe_A          266 TIF  268 (359)
T ss_dssp             HHH
T ss_pred             hhc
Confidence            864

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.78  E-value=6.9e-19  Score=105.46  Aligned_cols=95  Identities=35%  Similarity=0.614  Sum_probs=74.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEecCCC---------------------
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQL-GLIHADLKPENIMLVDPVR---------------------   59 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~~~h~~l~~~~~~~~~~~~---------------------   59 (98)
                      ++++|.+++.......+++..+..++.|++.||.|||++ +++|+||++.||++.....                     
T Consensus       127 ~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (397)
T 1wak_A          127 LGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPS  206 (397)
T ss_dssp             CCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC-----------
T ss_pred             cCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCC
Confidence            367788877766555799999999999999999999998 9999999999999942210                     


Q ss_pred             ------------------------CCccEEEeeecCceeecccccceecccccccCcccccC
Q psy11820         60 ------------------------QPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        60 ------------------------~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~pe~~~~   97 (98)
                                              ....++|.|||.+...... .....+++.|+|||++.+
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-~~~~~gt~~y~aPE~~~~  267 (397)
T 1wak_A          207 GSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-FTEDIQTRQYRSLEVLIG  267 (397)
T ss_dssp             ----------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-SCSCCSCGGGCCHHHHHT
T ss_pred             CCccccCCcccccccccccccccccccceEecccccccccccc-CccCCCCCcccCChhhcC
Confidence                                    1126999999998765432 234567899999998764

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.78  E-value=1e-19  Score=111.32  Aligned_cols=92  Identities=28%  Similarity=0.363  Sum_probs=73.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      |.+|+|.+++.......++...+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|+|||++....... 
T Consensus       264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill----~~~~~~kl~DFG~a~~~~~~~~  339 (454)
T 1qcf_A          264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV----SASLVCKIADFGLARVIEDNEY  339 (454)
T ss_dssp             CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE----CTTCCEEECSTTGGGGBCCHHH
T ss_pred             cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE----CCCCcEEEeeCCCceEcCCCce
Confidence            457899999975433358888999999999999999999999999999999999    666789999999987653221 


Q ss_pred             --cceecccccccCccccc
Q psy11820         80 --CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 --~~~~~~~~~~~~pe~~~   96 (98)
                        .....++..|+|||++.
T Consensus       340 ~~~~~~~~~~~y~aPE~~~  358 (454)
T 1qcf_A          340 TAREGAKFPIKWTAPEAIN  358 (454)
T ss_dssp             HTTCSSSSCGGGSCHHHHH
T ss_pred             eccCCCcccccccCHHHhc
Confidence              12223466799999875

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.78  E-value=2.4e-19  Score=106.67  Aligned_cols=90  Identities=26%  Similarity=0.486  Sum_probs=74.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      .+++|.+++....  .+++..+..++.+++.|+.|+|+. +++|+|+++.||++    +..+.++|.|||++........
T Consensus       114 ~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~  187 (360)
T 3eqc_A          114 DGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSMA  187 (360)
T ss_dssp             TTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE----CTTCCEEECCCCCCHHHHHHC-
T ss_pred             CCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEE----CCCCCEEEEECCCCcccccccc
Confidence            4789999998754  689999999999999999999995 99999999999999    6667899999998865543333


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       188 ~~~~gt~~y~aPE~~~~  204 (360)
T 3eqc_A          188 NSFVGTRSYMSPERLQG  204 (360)
T ss_dssp             ---CCCCTTCCHHHHTT
T ss_pred             cCCCCCCCeECHHHHcC
Confidence            45578899999998764

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.78  E-value=5.4e-19  Score=106.69  Aligned_cols=96  Identities=31%  Similarity=0.509  Sum_probs=69.5

Q ss_pred             cchhHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820          2 LEQNLYDFLKQN-------KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus         2 ~~~~L~~~~~~~-------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ++++|.+++...       ....+++..+..++.|++.||.|||+.+++|+||++.||++.......+.++|+|||++..
T Consensus       102 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~  181 (405)
T 3rgf_A          102 AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  181 (405)
T ss_dssp             CSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC-
T ss_pred             CCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCcee
Confidence            356777776522       1224889999999999999999999999999999999999955444567899999999976


Q ss_pred             eccc-----ccceecccccccCcccccC
Q psy11820         75 VSKA-----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        75 ~~~~-----~~~~~~~~~~~~~pe~~~~   97 (98)
                      ....     ......+++.|+|||++.+
T Consensus       182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~  209 (405)
T 3rgf_A          182 FNSPLKPLADLDPVVVTFWYRAPELLLG  209 (405)
T ss_dssp             ---------------CCCTTCCHHHHTT
T ss_pred             cCCCCcccccCCCceecCcccCchhhcC
Confidence            5321     2234568999999998864

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.78  E-value=4.6e-19  Score=105.64  Aligned_cols=95  Identities=33%  Similarity=0.608  Sum_probs=77.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEecCC--CCCccEEEeeecCceeeccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQL-GLIHADLKPENIMLVDPV--RQPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~~~h~~l~~~~~~~~~~~--~~~~~~~l~~~g~~~~~~~~   78 (98)
                      .+++|.+++.......++...+..++.|++.|+.|||++ +++|+||++.||++...+  .....++|+|||++......
T Consensus       112 ~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~  191 (373)
T 1q8y_A          112 LGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH  191 (373)
T ss_dssp             CCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC
T ss_pred             CCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC
Confidence            378999999876555699999999999999999999998 999999999999995432  23447899999998765432


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                       .....+++.|+|||++.+
T Consensus       192 -~~~~~~t~~y~aPE~~~~  209 (373)
T 1q8y_A          192 -YTNSIQTREYRSPEVLLG  209 (373)
T ss_dssp             -CCSCCSCGGGCCHHHHHT
T ss_pred             -CCCCCCCccccCcHHHhC
Confidence             234467899999998764

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.78  E-value=1.9e-19  Score=109.26  Aligned_cols=93  Identities=31%  Similarity=0.481  Sum_probs=70.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.||++... .....++|+|||++...... .
T Consensus       221 ~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~-~~~~~~kl~DFG~a~~~~~~~~  297 (419)
T 3i6u_A          221 MEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ-EEDCLIKITDFGHSKILGETSL  297 (419)
T ss_dssp             CTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS-SSSCCEEECCSSTTTSCC----
T ss_pred             CCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecC-CCcceEEEeecccceecCCCcc
Confidence            35788988887554  68999999999999999999999999999999999999432 12346999999999765432 2


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....+++.|+|||++.
T Consensus       298 ~~~~~gt~~y~aPE~~~  314 (419)
T 3i6u_A          298 MRTLCGTPTYLAPEVLV  314 (419)
T ss_dssp             -------CTTCCTTTTC
T ss_pred             ccccCCCCCccCceeee
Confidence            34567899999999874

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.78  E-value=2.3e-19  Score=106.42  Aligned_cols=91  Identities=16%  Similarity=0.186  Sum_probs=74.5

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc----
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----   78 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~----   78 (98)
                      +++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.||++...  ....++|+|||++......    
T Consensus       135 ~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~~~kL~Dfg~a~~~~~~~~~~  210 (345)
T 2v62_A          135 GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYK--NPDQVYLADYGLSYRYCPNGNHK  210 (345)
T ss_dssp             EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESS--STTSEEECCCTTCEESSGGGCCC
T ss_pred             CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccC--CCCcEEEEeCCCceecccccccc
Confidence            789999998655  69999999999999999999999999999999999999442  1238999999999765321    


Q ss_pred             -----ccceecccccccCcccccC
Q psy11820         79 -----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -----~~~~~~~~~~~~~pe~~~~   97 (98)
                           ......+++.|+|||++.+
T Consensus       211 ~~~~~~~~~~~gt~~y~aPE~~~~  234 (345)
T 2v62_A          211 QYQENPRKGHNGTIEFTSLDAHKG  234 (345)
T ss_dssp             CCCCCGGGCSCSCTTTCCHHHHHT
T ss_pred             cchhccccccCCCccccCHHHhcC
Confidence                 1134468899999998764

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.78  E-value=7.2e-19  Score=108.48  Aligned_cols=94  Identities=27%  Similarity=0.434  Sum_probs=76.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.||++... .....++|+|||++...... .
T Consensus       118 ~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~-~~~~~~kl~DfG~a~~~~~~~~  194 (494)
T 3lij_A          118 YKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESK-EKDALIKIVDFGLSAVFENQKK  194 (494)
T ss_dssp             CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS-STTCCEEECCCTTCEECBTTBC
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCC-CCCCcEEEEECCCCeECCCCcc
Confidence            35789999887654  68999999999999999999999999999999999999432 12346999999998776433 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       195 ~~~~~gt~~y~aPE~l~~  212 (494)
T 3lij_A          195 MKERLGTAYYIAPEVLRK  212 (494)
T ss_dssp             BCCCCSCTTTCCHHHHTT
T ss_pred             ccccCCCcCeeCHHHHcc
Confidence            345578999999998754

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.78  E-value=7.9e-19  Score=104.71  Aligned_cols=88  Identities=36%  Similarity=0.624  Sum_probs=74.3

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++...   .+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++......   
T Consensus       112 ~~~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~----~~~~~~kl~Dfg~a~~~~~~~~~  184 (364)
T 3qyz_A          112 METDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL----NTTCDLKICDFGLARVADPDHDH  184 (364)
T ss_dssp             CSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEECCGGGCB
T ss_pred             cCcCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEE----CCCCCEEEEeCcceEecCCCCCc
Confidence            457899999764   48999999999999999999999999999999999999    66778999999999765432   


Q ss_pred             --ccceecccccccCccccc
Q psy11820         79 --VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~   96 (98)
                        ......+++.|+|||++.
T Consensus       185 ~~~~~~~~gt~~y~aPE~~~  204 (364)
T 3qyz_A          185 TGFLTEYVATRWYRAPEIML  204 (364)
T ss_dssp             CCTTCCCCSCGGGCCHHHHH
T ss_pred             cccccccccccCCCCCHHhc
Confidence              123457899999999864

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.78  E-value=6.9e-19  Score=103.72  Aligned_cols=90  Identities=23%  Similarity=0.331  Sum_probs=72.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++.... ..+++..+..++.+++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++.......  
T Consensus       133 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~~~~~~~~~  207 (325)
T 3kul_A          133 ENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV----DSNLVCKVSDFGLSRVLEDDPDA  207 (325)
T ss_dssp             TTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCSSCEECC----C
T ss_pred             CCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE----CCCCCEEECCCCcccccccCccc
Confidence            4789999997543 368999999999999999999999999999999999999    667789999999998654321  


Q ss_pred             ---cceecccccccCccccc
Q psy11820         80 ---CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ---~~~~~~~~~~~~pe~~~   96 (98)
                         .....+++.|+|||++.
T Consensus       208 ~~~~~~~~~t~~y~aPE~~~  227 (325)
T 3kul_A          208 AYTTTGGKIPIRWTAPEAIA  227 (325)
T ss_dssp             CEECC---CCGGGSCHHHHH
T ss_pred             eeeccCCCCcccccCHhHhc
Confidence               11223456799999875

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.78  E-value=2e-19  Score=106.00  Aligned_cols=96  Identities=23%  Similarity=0.359  Sum_probs=73.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+++|.+++.......+++..+..++.|++.|+.|||+.+++|+|+++.||++... ...+.++|.|||++...... .
T Consensus       111 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~-~~~~~~kL~Dfg~a~~~~~~~~  189 (327)
T 3lm5_A          111 AAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSI-YPLGDIKIVDFGMSRKIGHACE  189 (327)
T ss_dssp             CTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCB-TTBCCEEECCGGGCEEC-----
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecC-CCCCcEEEeeCccccccCCccc
Confidence            357788888865544578999999999999999999999999999999999999331 12568999999999866432 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       190 ~~~~~gt~~y~aPE~~~~  207 (327)
T 3lm5_A          190 LREIMGTPEYLAPEILNY  207 (327)
T ss_dssp             ----CCCGGGCCHHHHTT
T ss_pred             cccccCCcCccCCeeecC
Confidence            234568899999998764

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.78  E-value=1.4e-18  Score=100.86  Aligned_cols=90  Identities=23%  Similarity=0.490  Sum_probs=73.9

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      +++|.+++.... +.+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|.|||++......  ..
T Consensus        84 ~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~~  158 (292)
T 3o0g_A           84 DQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI----NRNGELKLANFGLARAFGIPVRCY  158 (292)
T ss_dssp             SEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECCSCCSCC
T ss_pred             CCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEeecccceecCCccccc
Confidence            456777766543 369999999999999999999999999999999999999    66778999999999765432  22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       159 ~~~~~t~~y~aPE~~~~  175 (292)
T 3o0g_A          159 SAEVVTLWYRPPDVLFG  175 (292)
T ss_dssp             CSCCSCGGGCCHHHHTT
T ss_pred             cCCccccCCcChHHHcC
Confidence            34567889999998754

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.78  E-value=3e-19  Score=109.81  Aligned_cols=94  Identities=28%  Similarity=0.507  Sum_probs=76.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+++++|+|++|.||++... ...+.++|+|||++...... .
T Consensus       108 ~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~-~~~~~~kl~Dfg~a~~~~~~~~  184 (484)
T 3nyv_A          108 YTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESK-SKDANIRIIDFGLSTHFEASKK  184 (484)
T ss_dssp             CCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS-STTCCEEECCTTHHHHBCCCCS
T ss_pred             CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecC-CCCCcEEEEeeeeeEEcccccc
Confidence            35789999987654  69999999999999999999999999999999999999432 23467999999988765432 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       185 ~~~~~gt~~y~aPE~~~~  202 (484)
T 3nyv_A          185 MKDKIGTAYYIAPEVLHG  202 (484)
T ss_dssp             HHHHTTGGGTCCHHHHHT
T ss_pred             cccCCCCccccCceeecC
Confidence            244568999999998764

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.78  E-value=2e-19  Score=104.69  Aligned_cols=88  Identities=19%  Similarity=0.380  Sum_probs=71.3

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      +++|.+++.   ...+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|.|||++......  ..
T Consensus       122 ~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~~  194 (298)
T 2zv2_A          122 QGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV----GEDGHIKIADFGVSNEFKGSDALL  194 (298)
T ss_dssp             TCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTSCEEECCCTTCEECSSSSCEE
T ss_pred             CCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE----CCCCCEEEecCCCccccccccccc
Confidence            455555433   2358999999999999999999999999999999999999    66678999999998765432  22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       195 ~~~~gt~~y~aPE~~~~  211 (298)
T 2zv2_A          195 SNTVGTPAFMAPESLSE  211 (298)
T ss_dssp             CCCCSCGGGCCGGGCCT
T ss_pred             cCCcCCccccChhhhcc
Confidence            34568899999998764

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.78  E-value=8.1e-19  Score=103.04  Aligned_cols=91  Identities=24%  Similarity=0.480  Sum_probs=74.2

Q ss_pred             chhHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc
Q psy11820          3 EQNLYDFLKQNK----FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         3 ~~~L~~~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~   78 (98)
                      +++|.+++....    ...++...+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++......
T Consensus        86 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~----~~~~~~kl~Dfg~~~~~~~~  161 (317)
T 2pmi_A           86 DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLI----NKRGQLKLGDFGLARAFGIP  161 (317)
T ss_dssp             CCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCSSCEETTSC
T ss_pred             CCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEE----cCCCCEEECcCccceecCCC
Confidence            468888886432    2358899999999999999999999999999999999999    66678999999998765422


Q ss_pred             --ccceecccccccCcccccC
Q psy11820         79 --VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~~   97 (98)
                        ......+++.|+|||++.+
T Consensus       162 ~~~~~~~~~t~~y~aPE~~~~  182 (317)
T 2pmi_A          162 VNTFSSEVVTLWYRAPDVLMG  182 (317)
T ss_dssp             CCCCCCCCSCCTTCCHHHHTT
T ss_pred             cccCCCCcccccccCchHhhC
Confidence              2234567899999998764

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.78  E-value=1e-18  Score=100.75  Aligned_cols=94  Identities=22%  Similarity=0.307  Sum_probs=73.7

Q ss_pred             cchhHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCC---------------CCCccE
Q psy11820          2 LEQNLYDFLKQNK--FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV---------------RQPYRV   64 (98)
Q Consensus         2 ~~~~L~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~---------------~~~~~~   64 (98)
                      .+++|.+++....  ...+++..+..++.|++.|+.|+|+++++|+|+++.||++....               .....+
T Consensus        94 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (289)
T 1x8b_A           94 NGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMF  173 (289)
T ss_dssp             TTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCE
T ss_pred             CCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEE
Confidence            4779999997542  13689999999999999999999999999999999999994321               134478


Q ss_pred             EEeeecCceeecccccceecccccccCcccccC
Q psy11820         65 KVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        65 ~l~~~g~~~~~~~~~~~~~~~~~~~~~pe~~~~   97 (98)
                      ++.|||.+......  ....+++.|+|||++.+
T Consensus       174 kl~Dfg~~~~~~~~--~~~~gt~~y~aPE~~~~  204 (289)
T 1x8b_A          174 KIGDLGHVTRISSP--QVEEGDSRFLANEVLQE  204 (289)
T ss_dssp             EECCCTTCEETTCS--CCCCCCGGGCCHHHHTT
T ss_pred             EEcccccccccCCc--cccCCCccccChhHhcC
Confidence            99999998765432  23457889999998764

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.78  E-value=4.7e-19  Score=104.49  Aligned_cols=94  Identities=27%  Similarity=0.457  Sum_probs=70.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCC-CCCccEEEeeecCceeeccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV-RQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~-~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      ++++|.+++....  .+++..+..++.|++.|+.|||+++++|+|+++.||++.... .....++|.|||++......  
T Consensus       115 ~~~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~  192 (329)
T 3gbz_A          115 AENDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR  192 (329)
T ss_dssp             CSEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC----
T ss_pred             CCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc
Confidence            3578999998765  699999999999999999999999999999999999995433 23456999999998754322  


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       193 ~~~~~~~t~~y~aPE~~~~  211 (329)
T 3gbz_A          193 QFTHEIITLWYRPPEILLG  211 (329)
T ss_dssp             -------CCTTCCHHHHTT
T ss_pred             ccCCCcCCccccCHHHhcC
Confidence            2234467889999998764

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.78  E-value=4.5e-19  Score=104.58  Aligned_cols=92  Identities=25%  Similarity=0.347  Sum_probs=69.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    ...+.++|.|||++......  
T Consensus        98 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~----~~~~~~kL~DfG~a~~~~~~~~  172 (327)
T 3lzb_A           98 MPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEK  172 (327)
T ss_dssp             CSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----EETTEEEECCTTC---------
T ss_pred             cCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEE----cCCCCEEEccCcceeEccCccc
Confidence            45789999998753 358999999999999999999999999999999999999    55568999999998765322  


Q ss_pred             --ccceecccccccCcccccC
Q psy11820         79 --VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~~   97 (98)
                        ......+++.|+|||++.+
T Consensus       173 ~~~~~~~~~t~~y~aPE~~~~  193 (327)
T 3lzb_A          173 EYHAEGGKVPIKWMALESILH  193 (327)
T ss_dssp             -------CCCGGGSCHHHHHH
T ss_pred             cccccCCCccccccCHHHHcC
Confidence              1122345678999998753

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.78  E-value=1.3e-18  Score=107.38  Aligned_cols=94  Identities=23%  Similarity=0.358  Sum_probs=76.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      ++++|.+++.... ..+++..+..++.|++.||.|||+++++|+||++.||++... +..+.++|.|||++.......  
T Consensus        85 ~g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~-~~~~~vkL~DFGla~~~~~~~~~  162 (483)
T 3sv0_A           85 LGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG-RRANQVYIIDFGLAKKYRDTSTH  162 (483)
T ss_dssp             CCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCG-GGTTCEEECCCTTCEECBCTTTC
T ss_pred             CCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecC-CCCCeEEEEeCCcceeccCCccc
Confidence            4789999998543 369999999999999999999999999999999999999421 245579999999998654321  


Q ss_pred             -------cceecccccccCcccccC
Q psy11820         80 -------CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 -------~~~~~~~~~~~~pe~~~~   97 (98)
                             .....+++.|+|||++.+
T Consensus       163 ~~~~~~~~~~~~gt~~Y~aPE~~~~  187 (483)
T 3sv0_A          163 QHIPYRENKNLTGTARYASVNTHLG  187 (483)
T ss_dssp             CBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred             cccccccccccCCCccccCHHHhcC
Confidence                   124578899999999865

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.78  E-value=9.5e-19  Score=108.16  Aligned_cols=94  Identities=28%  Similarity=0.470  Sum_probs=76.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|++|.||++... .....++|+|||++...... .
T Consensus       128 ~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~-~~~~~~kl~Dfg~a~~~~~~~~  204 (504)
T 3q5i_A          128 YEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENK-NSLLNIKIVDFGLSSFFSKDYK  204 (504)
T ss_dssp             CTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESST-TCCSSEEECCCTTCEECCTTSC
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecC-CCCccEEEEECCCCEEcCCCCc
Confidence            35789999887654  69999999999999999999999999999999999999432 12236999999999876433 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       205 ~~~~~gt~~y~aPE~~~~  222 (504)
T 3q5i_A          205 LRDRLGTAYYIAPEVLKK  222 (504)
T ss_dssp             BCCCCSCTTTCCHHHHTT
T ss_pred             cccccCCcCCCCHHHhcc
Confidence            345578999999998754

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.78  E-value=5.2e-19  Score=106.60  Aligned_cols=95  Identities=24%  Similarity=0.347  Sum_probs=77.2

Q ss_pred             cchhHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          2 LEQNLYDFLKQNK-FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      .+++|.+++.... ...+++..+..++.|++.|+.|||+.+++|+|+++.||++....+....++|+|||++...... .
T Consensus        92 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~  171 (396)
T 4eut_A           92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ  171 (396)
T ss_dssp             TTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGG
T ss_pred             CCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCc
Confidence            4789999997543 2238999999999999999999999999999999999998554455667999999999875433 2


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....+++.|+|||++.
T Consensus       172 ~~~~~gt~~y~aPE~~~  188 (396)
T 4eut_A          172 FVSLYGTEEYLHPDMYE  188 (396)
T ss_dssp             SSCSSSCCTTCCHHHHH
T ss_pred             cccccCCccccCHHHhh
Confidence            23456889999999864

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.78  E-value=1.9e-19  Score=110.11  Aligned_cols=92  Identities=26%  Similarity=0.356  Sum_probs=70.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      |.+|+|.+++.......++...+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|+|||++....... 
T Consensus       260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill----~~~~~~kl~DfG~a~~~~~~~~  335 (452)
T 1fmk_A          260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV----GENLVCKVADFGLARLIEDNEY  335 (452)
T ss_dssp             CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEECCCCTTC-------
T ss_pred             hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEE----CCCCCEEECCCccceecCCCce
Confidence            457899999975433358999999999999999999999999999999999999    666789999999987654321 


Q ss_pred             --cceecccccccCccccc
Q psy11820         80 --CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 --~~~~~~~~~~~~pe~~~   96 (98)
                        .....++..|+|||++.
T Consensus       336 ~~~~~~~~~~~y~aPE~~~  354 (452)
T 1fmk_A          336 TARQGAKFPIKWTAPEAAL  354 (452)
T ss_dssp             -------CCGGGSCHHHHH
T ss_pred             ecccCCcccccccCHhHHh
Confidence              12233567899999864

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.77  E-value=1.2e-18  Score=100.21  Aligned_cols=90  Identities=30%  Similarity=0.470  Sum_probs=68.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||++...... ..
T Consensus        94 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~~l~dfg~~~~~~~~~~~  167 (276)
T 2h6d_A           94 SGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL----DAHMNAKIADFGLSNMMSDGEFL  167 (276)
T ss_dssp             CSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEE----CTTSCEEECCCCGGGCCCC----
T ss_pred             CCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEE----CCCCCEEEeecccccccCCCcce
Confidence            4689999997654  68999999999999999999999999999999999999    66678999999988765432 22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       168 ~~~~~~~~y~aPE~~~~  184 (276)
T 2h6d_A          168 RTSCGSPNYAAPEVISG  184 (276)
T ss_dssp             ---------CCTGGGTT
T ss_pred             ecccCCccccCHHHHcC
Confidence            34467889999999764

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.77  E-value=1.1e-18  Score=104.67  Aligned_cols=93  Identities=44%  Similarity=0.807  Sum_probs=76.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH--HcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLK--QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh--~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~   79 (98)
                      ++++|.+++.......+++..+..++.|++.|+.|+|  +.+++|+||++.||++..  +..+.++|+|||++...... 
T Consensus       138 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~--~~~~~~kL~DFG~a~~~~~~-  214 (382)
T 2vx3_A          138 LSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN--PKRSAIKIVDFGSSCQLGQR-  214 (382)
T ss_dssp             CCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS--TTSCCEEECCCTTCEETTCC-
T ss_pred             CCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec--CCCCcEEEEeccCceecccc-
Confidence            4679999998776557999999999999999999999  578999999999999943  22457999999999765432 


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       215 ~~~~~~t~~y~aPE~~~~  232 (382)
T 2vx3_A          215 IYQYIQSRFYRSPEVLLG  232 (382)
T ss_dssp             CCSSCSCGGGCCHHHHTT
T ss_pred             cccccCCccccChHHHcC
Confidence            234568899999999865

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.77  E-value=7.9e-19  Score=103.10  Aligned_cols=91  Identities=31%  Similarity=0.532  Sum_probs=71.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++.......+++..+..++.|++.|+.|||+.+++|+|+++.||++    ...+.++|.|||++......  .
T Consensus       110 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~----~~~~~~kl~Dfg~~~~~~~~~~~  185 (326)
T 2x7f_A          110 GAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL----TENAEVKLVDFGVSAQLDRTVGR  185 (326)
T ss_dssp             TTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE----CTTCCEEECCCTTTC--------
T ss_pred             CCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEE----cCCCCEEEeeCcCceecCcCccc
Confidence            46799999987654578999999999999999999999999999999999999    66678999999988765322  2


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....+++.|+|||++.
T Consensus       186 ~~~~~~~~~y~aPE~~~  202 (326)
T 2x7f_A          186 RNTFIGTPYWMAPEVIA  202 (326)
T ss_dssp             -----CCGGGCCHHHHC
T ss_pred             cccccCCccccChhhhc
Confidence            23456788999999875

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.77  E-value=9.3e-19  Score=102.08  Aligned_cols=93  Identities=27%  Similarity=0.453  Sum_probs=76.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++... +..+.+++.|||++.........
T Consensus        89 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~-~~~~~~kl~Dfg~~~~~~~~~~~  165 (304)
T 2jam_A           89 SGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTP-EENSKIMITDFGLSKMEQNGIMS  165 (304)
T ss_dssp             CSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSS-STTCCEEBCSCSTTCCCCCBTTH
T ss_pred             CCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecC-CCCCCEEEccCCcceecCCCccc
Confidence            4789999987654  68999999999999999999999999999999999998432 23557999999998765443334


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...+++.|+|||++.+
T Consensus       166 ~~~~~~~y~aPE~~~~  181 (304)
T 2jam_A          166 TACGTPGYVAPEVLAQ  181 (304)
T ss_dssp             HHHSCCCBCCTTTBSS
T ss_pred             cccCCCCccChHHhcc
Confidence            4568899999998764

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.77  E-value=1.4e-18  Score=101.52  Aligned_cols=90  Identities=28%  Similarity=0.486  Sum_probs=70.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++....  .+++..+..++.+++.|+.|+|+.+++|+|+++.||++    +..+.++|.|||.+......  .
T Consensus        85 ~~~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  158 (311)
T 4agu_A           85 DHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI----TKHSVIKLCDFGFARLLTGPSDY  158 (311)
T ss_dssp             SEEHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECC-----
T ss_pred             CCchHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEE----cCCCCEEEeeCCCchhccCcccc
Confidence            4678888877554  68999999999999999999999999999999999999    66678999999999765422  2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       159 ~~~~~~~~~y~aPE~~~~  176 (311)
T 4agu_A          159 YDDEVATRWYRSPELLVG  176 (311)
T ss_dssp             -------GGGCCHHHHHT
T ss_pred             cCCCcCCccccChHHHhc
Confidence            234567889999998754

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.77  E-value=3.1e-19  Score=106.84  Aligned_cols=88  Identities=32%  Similarity=0.606  Sum_probs=61.3

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      ++++|.+++..   ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|+|||++...... ..
T Consensus       116 ~~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll----~~~~~~kL~DFG~a~~~~~~-~~  187 (367)
T 2fst_X          116 MGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV----NEDCELKILDFGLARHTADE-MT  187 (367)
T ss_dssp             CCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECC-------------
T ss_pred             cCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEE----CCCCCEEEeecccccccccc-CC
Confidence            36778888764   358999999999999999999999999999999999999    66778999999998765432 23


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...++++|+|||++.+
T Consensus       188 ~~~~t~~y~aPE~~~~  203 (367)
T 2fst_X          188 GYVATRWYRAPEIMLN  203 (367)
T ss_dssp             ---CCCTTCCHHHHTT
T ss_pred             CcCcCcCccChHHHcC
Confidence            4568899999998764

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.77  E-value=1.6e-18  Score=101.85  Aligned_cols=92  Identities=25%  Similarity=0.279  Sum_probs=75.7

Q ss_pred             CcchhHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHc---CCcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820          1 MLEQNLYDFLKQNK--FSPLPLKYIRPILHQVLTALLKLKQL---GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus         1 ~~~~~L~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh~~---~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      +.+++|.+++....  ...+++..+..++.+++.|+.|+|+.   +++|+|+++.||++    +..+.++|.|||++...
T Consensus       109 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~----~~~~~~kl~Dfg~~~~~  184 (326)
T 3uim_A          109 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL----DEEFEAVVGDFGLAKLM  184 (326)
T ss_dssp             CTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE----CTTCCEEECCCSSCEEC
T ss_pred             ccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE----CCCCCEEeccCcccccc
Confidence            35789999998653  22488999999999999999999999   99999999999999    66678999999999765


Q ss_pred             ccc---ccceecccccccCccccc
Q psy11820         76 SKA---VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        76 ~~~---~~~~~~~~~~~~~pe~~~   96 (98)
                      ...   ......+++.|+|||++.
T Consensus       185 ~~~~~~~~~~~~gt~~y~aPE~~~  208 (326)
T 3uim_A          185 DYKDTHVTTAVRGTIGHIAPEYLS  208 (326)
T ss_dssp             CSSSSCEECCCCSCGGGCCHHHHH
T ss_pred             CcccccccccccCCcCccCHHHhc
Confidence            422   123345889999999874

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.77  E-value=6.1e-19  Score=102.01  Aligned_cols=91  Identities=23%  Similarity=0.282  Sum_probs=75.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++.......+++..+..++.+++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||.+.......  
T Consensus        92 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~----~~~~~~~l~Dfg~~~~~~~~~~~  167 (288)
T 3kfa_A           92 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV----GENHLVKVADFGLSRLMTGDTYT  167 (288)
T ss_dssp             TTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEE----CGGGCEEECCCCGGGTSCSSSSE
T ss_pred             CCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEE----cCCCCEEEccCccceeccCCccc
Confidence            46899999987665678999999999999999999999999999999999999    666789999999887554321  


Q ss_pred             -cceecccccccCccccc
Q psy11820         80 -CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 -~~~~~~~~~~~~pe~~~   96 (98)
                       .....+++.|+|||++.
T Consensus       168 ~~~~~~~~~~y~aPE~~~  185 (288)
T 3kfa_A          168 AHAGAKFPIKWTAPESLA  185 (288)
T ss_dssp             EETTEEECGGGCCHHHHH
T ss_pred             cccCCccccCcCChhhhc
Confidence             12234567899999875

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.77  E-value=7.6e-19  Score=101.85  Aligned_cols=90  Identities=26%  Similarity=0.473  Sum_probs=71.6

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      .++|.+++.... ..+++..+..++.|++.|+.|+|+++++|+|+++.||++    +..+.++|+|||++......  ..
T Consensus        83 ~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~~  157 (288)
T 1ob3_A           83 DQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI----NREGELKIADFGLARAFGIPVRKY  157 (288)
T ss_dssp             SEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECCTTHHHHHCC-----
T ss_pred             CCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----cCCCCEEEeECccccccCcccccc
Confidence            468889887653 368999999999999999999999999999999999999    66778999999988654321  22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       158 ~~~~~t~~y~aPE~~~~  174 (288)
T 1ob3_A          158 THEIVTLWYRAPDVLMG  174 (288)
T ss_dssp             ----CCCTTCCHHHHTT
T ss_pred             ccccccccccCchheeC
Confidence            34467889999998754

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.77  E-value=6.8e-19  Score=103.92  Aligned_cols=91  Identities=24%  Similarity=0.309  Sum_probs=72.9

Q ss_pred             cchhHHHHHhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCC
Q psy11820          2 LEQNLYDFLKQNK----------------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR   59 (98)
Q Consensus         2 ~~~~L~~~~~~~~----------------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~   59 (98)
                      .+++|.+++....                      ...+++..+..++.|++.|+.|||+++++|+|+++.||++    +
T Consensus       133 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~----~  208 (343)
T 1luf_A          133 AYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV----G  208 (343)
T ss_dssp             TTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----C
T ss_pred             CCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE----C
Confidence            4679999997642                      1468899999999999999999999999999999999999    6


Q ss_pred             CCccEEEeeecCceeeccc----ccceecccccccCccccc
Q psy11820         60 QPYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        60 ~~~~~~l~~~g~~~~~~~~----~~~~~~~~~~~~~pe~~~   96 (98)
                      ..+.++|.|||++......    ......+++.|+|||++.
T Consensus       209 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  249 (343)
T 1luf_A          209 ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF  249 (343)
T ss_dssp             GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH
T ss_pred             CCCeEEEeecCCCcccccCccccccCCCcccceecChhhhc
Confidence            6678999999998754321    122345678899999865

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.77  E-value=1.5e-18  Score=102.50  Aligned_cols=90  Identities=29%  Similarity=0.363  Sum_probs=75.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|.|||++......  .
T Consensus       124 ~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~----~~~~~~kl~Dfg~~~~~~~~~~~  197 (335)
T 2owb_A          124 RRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL----NEDLEVKIGDFGLATKVEYDGER  197 (335)
T ss_dssp             TTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTCCEEECCCTTCEECCSTTCC
T ss_pred             CCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEE----cCCCCEEEeeccCceecccCccc
Confidence            4689999887654  68999999999999999999999999999999999999    66678999999998765422  2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       198 ~~~~~gt~~y~aPE~~~~  215 (335)
T 2owb_A          198 KKVLCGTPNYIAPEVLSK  215 (335)
T ss_dssp             BCCCCSCCSSCCHHHHHT
T ss_pred             ccccCCCccccCHHHhcc
Confidence            234568889999998754

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.77  E-value=1.5e-18  Score=100.21  Aligned_cols=94  Identities=33%  Similarity=0.477  Sum_probs=73.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++.........+++.|||.+...... ..
T Consensus        91 ~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~  168 (283)
T 3bhy_A           91 SGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF  168 (283)
T ss_dssp             CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-----
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcc
Confidence            4789999997654  68999999999999999999999999999999999999443323347999999998765432 22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       169 ~~~~~~~~y~aPE~~~~  185 (283)
T 3bhy_A          169 KNIFGTPEFVAPEIVNY  185 (283)
T ss_dssp             ---CCCGGGCCHHHHTT
T ss_pred             cccCCCcCccCcceecC
Confidence            34457889999998754

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.77  E-value=1.7e-18  Score=99.99  Aligned_cols=93  Identities=23%  Similarity=0.374  Sum_probs=75.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+++|.+++....  .+++..+..++.+++.|+.|+|+.+++|+|+++.||++... .....+++.|||.+...... ..
T Consensus        88 ~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~-~~~~~~kl~Dfg~~~~~~~~~~~  164 (284)
T 3kk8_A           88 TGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASK-AKGAAVKLADFGLAIEVNDSEAW  164 (284)
T ss_dssp             CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSS-STTCCEEECCCTTCEECCSSCBC
T ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecC-CCCCcEEEeeceeeEEcccCccc
Confidence            5779988887654  68999999999999999999999999999999999999432 12345999999998765433 22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       165 ~~~~~~~~y~aPE~~~~  181 (284)
T 3kk8_A          165 HGFAGTPGYLSPEVLKK  181 (284)
T ss_dssp             CCSCSCGGGCCHHHHTT
T ss_pred             cCCCCCcCCcCchhhcC
Confidence            34568899999998764

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.77  E-value=1.9e-18  Score=99.56  Aligned_cols=93  Identities=26%  Similarity=0.466  Sum_probs=76.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+++|.+++....  .+++..+..++.+++.|+.|+|+.+++|+|+++.||++... .....+++.|||++...... ..
T Consensus        89 ~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~-~~~~~~~l~Dfg~~~~~~~~~~~  165 (277)
T 3f3z_A           89 TGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD-SPDSPLKLIDFGLAARFKPGKMM  165 (277)
T ss_dssp             CSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS-STTCCEEECCCTTCEECCTTSCB
T ss_pred             CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecC-CCCCcEEEEecccceeccCccch
Confidence            4789999887654  68999999999999999999999999999999999999432 34557999999998765432 23


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       166 ~~~~~t~~y~aPE~~~~  182 (277)
T 3f3z_A          166 RTKVGTPYYVSPQVLEG  182 (277)
T ss_dssp             CCCCSCTTTCCHHHHTT
T ss_pred             hccCCCCCccChHHhcc
Confidence            45568899999998754

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.77  E-value=1.8e-18  Score=100.26  Aligned_cols=93  Identities=23%  Similarity=0.330  Sum_probs=75.2

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc----
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----   78 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~----   78 (98)
                      +++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.||++... ...+.++|+|||++......    
T Consensus        88 ~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~-~~~~~~kL~Dfg~a~~~~~~~~~~  165 (296)
T 4hgt_A           88 GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG-KKGNLVYIIDFGLAKKYRDARTHQ  165 (296)
T ss_dssp             CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCG-GGTTCEEECCCTTCEECBCTTTCC
T ss_pred             CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeecc-CCCCeEEEecCccceeccCcccCc
Confidence            789999997543 358999999999999999999999999999999999999321 23457999999999865432    


Q ss_pred             -----ccceecccccccCcccccC
Q psy11820         79 -----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -----~~~~~~~~~~~~~pe~~~~   97 (98)
                           ......+++.|+|||++.+
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~  189 (296)
T 4hgt_A          166 HIPYRENKNLTGTARYASINTHLG  189 (296)
T ss_dssp             BCCCCCSCCCCSCGGGCCHHHHTT
T ss_pred             cCCCCcccccCCCccccchHHhcC
Confidence                 1124568899999998765

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=7.2e-19  Score=103.97  Aligned_cols=91  Identities=21%  Similarity=0.277  Sum_probs=72.9

Q ss_pred             cchhHHHHHhhCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCC
Q psy11820          2 LEQNLYDFLKQNKF---------------------SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ   60 (98)
Q Consensus         2 ~~~~L~~~~~~~~~---------------------~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~   60 (98)
                      .+++|.+++.....                     ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    +.
T Consensus       132 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll----~~  207 (344)
T 1rjb_A          132 CYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV----TH  207 (344)
T ss_dssp             TTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEE----ET
T ss_pred             CCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEE----cC
Confidence            47899999976532                     237889999999999999999999999999999999999    55


Q ss_pred             CccEEEeeecCceeecccc----cceecccccccCccccc
Q psy11820         61 PYRVKVIDFGSASHVSKAV----CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        61 ~~~~~l~~~g~~~~~~~~~----~~~~~~~~~~~~pe~~~   96 (98)
                      .+.++|.|||++.......    .....+++.|+|||++.
T Consensus       208 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  247 (344)
T 1rjb_A          208 GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF  247 (344)
T ss_dssp             TTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH
T ss_pred             CCcEEeCCCccCcccccCccceeccCccCccCccCHHHhc
Confidence            6689999999987653321    12345677899999864

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.77  E-value=6e-19  Score=105.76  Aligned_cols=91  Identities=20%  Similarity=0.302  Sum_probs=73.3

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+++|.+++.... ..++...+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|+|||++........
T Consensus       194 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~----~~~~~~kl~DfG~s~~~~~~~~  268 (377)
T 3cbl_A          194 VQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV----TEKNVLKISDFGMSREEADGVY  268 (377)
T ss_dssp             CTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCGGGCEECTTSEE
T ss_pred             CCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEE----cCCCcEEECcCCCceecCCCce
Confidence            35789999997543 258899999999999999999999999999999999999    6667899999999876433211


Q ss_pred             ----ceecccccccCccccc
Q psy11820         81 ----NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ----~~~~~~~~~~~pe~~~   96 (98)
                          ....+++.|+|||++.
T Consensus       269 ~~~~~~~~~~~~y~aPE~~~  288 (377)
T 3cbl_A          269 AASGGLRQVPVKWTAPEALN  288 (377)
T ss_dssp             ECCSSCCEEEGGGSCHHHHH
T ss_pred             eecCCCCCCCcCcCCHhHhc
Confidence                1123456799999875

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.77  E-value=6.9e-19  Score=101.68  Aligned_cols=90  Identities=26%  Similarity=0.267  Sum_probs=64.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|.|||++.......  
T Consensus        98 ~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  172 (281)
T 1mp8_A           98 TLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV----SSNDCVKLGDFGLSRYMEDSTYY  172 (281)
T ss_dssp             TTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----EETTEEEECC-------------
T ss_pred             CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEE----CCCCCEEECccccccccCccccc
Confidence            4689999998653 358999999999999999999999999999999999999    445689999999987654321  


Q ss_pred             -cceecccccccCccccc
Q psy11820         80 -CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 -~~~~~~~~~~~~pe~~~   96 (98)
                       .....+++.|+|||++.
T Consensus       173 ~~~~~~~~~~y~aPE~~~  190 (281)
T 1mp8_A          173 KASKGKLPIKWMAPESIN  190 (281)
T ss_dssp             ------CCGGGCCHHHHH
T ss_pred             ccccCCCcccccChhhcc
Confidence             12234567899999874

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.77  E-value=5.6e-19  Score=105.63  Aligned_cols=95  Identities=21%  Similarity=0.307  Sum_probs=74.0

Q ss_pred             CcchhHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820          1 MLEQNLYDFLKQNK-----FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus         1 ~~~~~L~~~~~~~~-----~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      +.+++|.+++....     ...+++..+..++.|++.|+.|||+++++|+||++.||++... .....++|.|||++...
T Consensus       156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~-~~~~~~kL~DFG~a~~~  234 (367)
T 3l9p_A          156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDI  234 (367)
T ss_dssp             CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCS-STTCCEEECCCHHHHHH
T ss_pred             CCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecC-CCCceEEECCCcccccc
Confidence            35789999997643     1358899999999999999999999999999999999999432 13346999999998754


Q ss_pred             cc----cccceecccccccCccccc
Q psy11820         76 SK----AVCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        76 ~~----~~~~~~~~~~~~~~pe~~~   96 (98)
                      ..    ....+..+++.|+|||++.
T Consensus       235 ~~~~~~~~~~~~~~t~~y~aPE~~~  259 (367)
T 3l9p_A          235 YRAGYYRKGGCAMLPVKWMPPEAFM  259 (367)
T ss_dssp             HHHSSCTTCCGGGSCGGGCCHHHHH
T ss_pred             ccccccccCCCcCCcccEECHHHhc
Confidence            21    1223445688899999874

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.77  E-value=3.1e-19  Score=106.71  Aligned_cols=89  Identities=16%  Similarity=0.193  Sum_probs=69.5

Q ss_pred             chhHHHHHhhCCCCCCCHHHH------HHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYI------RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS   76 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~------~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~   76 (98)
                      +++|.+++..... .+.....      ..++.|++.|+.|||+++++|+||++.||++    +..+.++|+|||++....
T Consensus       171 ~~~L~~~l~~~~~-~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll----~~~~~~kL~DFG~a~~~~  245 (371)
T 3q60_A          171 SVDLELLFSTLDF-VYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFI----MPDGRLMLGDVSALWKVG  245 (371)
T ss_dssp             SEEHHHHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEE----CTTSCEEECCGGGEEETT
T ss_pred             CCCHHHHHHHhcc-ccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEE----CCCCCEEEEecceeeecC
Confidence            4899999976421 2444444      5667999999999999999999999999999    666789999999998654


Q ss_pred             ccccceecccccccCcccccC
Q psy11820         77 KAVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        77 ~~~~~~~~~~~~~~~pe~~~~   97 (98)
                      ... ....+++.|+|||++.+
T Consensus       246 ~~~-~~~~~t~~y~aPE~~~~  265 (371)
T 3q60_A          246 TRG-PASSVPVTYAPREFLNA  265 (371)
T ss_dssp             CEE-EGGGSCGGGCCHHHHTC
T ss_pred             CCc-cCccCCcCCcChhhccC
Confidence            322 13445689999999864

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.77  E-value=1.7e-18  Score=101.96  Aligned_cols=91  Identities=27%  Similarity=0.534  Sum_probs=71.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      ++++|.+++.... ..++...+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++......  .
T Consensus        82 ~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~----~~~~~~kl~Dfg~a~~~~~~~~~  156 (324)
T 3mtl_A           82 LDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLI----NERGELKLADFGLARAKSIPTKT  156 (324)
T ss_dssp             CSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEE----CTTCCEEECSSSEEECC------
T ss_pred             cccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEE----CCCCCEEEccCcccccccCCccc
Confidence            3578999887654 358999999999999999999999999999999999999    66678999999998754322  2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       157 ~~~~~~t~~y~aPE~~~~  174 (324)
T 3mtl_A          157 YDNEVVTLWYRPPDILLG  174 (324)
T ss_dssp             ------CGGGCCHHHHTT
T ss_pred             cccccCcccccChhhhcC
Confidence            234467889999998764

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.77  E-value=1.5e-18  Score=102.41  Aligned_cols=89  Identities=22%  Similarity=0.375  Sum_probs=74.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH--------HcCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLK--------QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh--------~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      .+++|.+++...   .+++..+..++.+++.|+.|+|        +.+++|+|+++.||++    +..+.++|.|||++.
T Consensus       123 ~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll----~~~~~~kL~Dfg~~~  195 (342)
T 1b6c_B          123 EHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV----KKNGTCCIADLGLAV  195 (342)
T ss_dssp             TTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE----CTTSCEEECCCTTCE
T ss_pred             CCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE----CCCCCEEEEECCCce
Confidence            467999999764   4899999999999999999999        8999999999999999    666789999999987


Q ss_pred             eecccc------cceecccccccCcccccC
Q psy11820         74 HVSKAV------CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        74 ~~~~~~------~~~~~~~~~~~~pe~~~~   97 (98)
                      ......      .....+++.|+|||++.+
T Consensus       196 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  225 (342)
T 1b6c_B          196 RHDSATDTIDIAPNHRVGTKRYMAPEVLDD  225 (342)
T ss_dssp             EEETTTTEEEECCCSCCCCGGGCCHHHHTS
T ss_pred             eccccccccccccccCCcCcccCCHhhhcc
Confidence            654321      233468889999998764

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.77  E-value=6.4e-19  Score=102.35  Aligned_cols=90  Identities=24%  Similarity=0.320  Sum_probs=70.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++......   
T Consensus        96 ~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  170 (295)
T 3ugc_A           96 PYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEF  170 (295)
T ss_dssp             TTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----EETTEEEECCCCSCC--------
T ss_pred             CCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEE----cCCCeEEEccCcccccccCCcce
Confidence            5789999998754 248999999999999999999999999999999999999    55568999999998765322   


Q ss_pred             --ccceecccccccCccccc
Q psy11820         79 --VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~   96 (98)
                        ......++..|+|||++.
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~  190 (295)
T 3ugc_A          171 FKVKEPGESPIFWYAPESLT  190 (295)
T ss_dssp             -----CTTCGGGGCCHHHHH
T ss_pred             eeeccCCCCccceeCcHHhc
Confidence              112234566799999875

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.77  E-value=1.8e-18  Score=100.56  Aligned_cols=91  Identities=23%  Similarity=0.252  Sum_probs=73.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++.... ..++...+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||++......   
T Consensus       110 ~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~----~~~~~~kl~Dfg~a~~~~~~~~~  184 (298)
T 3f66_A          110 KHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEYY  184 (298)
T ss_dssp             TTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTCCEEECSCGGGCCCSCGGGC
T ss_pred             CCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE----CCCCCEEECcccccccccccchh
Confidence            4679999997543 358899999999999999999999999999999999999    66778999999998765321   


Q ss_pred             ---ccceecccccccCcccccC
Q psy11820         79 ---VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ---~~~~~~~~~~~~~pe~~~~   97 (98)
                         ......+++.|+|||.+.+
T Consensus       185 ~~~~~~~~~~~~~y~aPE~~~~  206 (298)
T 3f66_A          185 SVHNKTGAKLPVKWMALESLQT  206 (298)
T ss_dssp             BC-----CCBCGGGSCHHHHHH
T ss_pred             ccccccCCCCCccccChHHhcC
Confidence               1123345678999998753

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.77  E-value=1.4e-18  Score=101.71  Aligned_cols=93  Identities=29%  Similarity=0.354  Sum_probs=70.3

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|||+++++|+|+++.||++... .....+++.|||++......  
T Consensus        93 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~-~~~~~~kl~Dfg~~~~~~~~~~  169 (316)
T 2ac3_A           93 MRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHP-NQVSPVKICDFDLGSGIKLNGD  169 (316)
T ss_dssp             CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCS-SSSCSEEECCTTCCC-------
T ss_pred             CCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccC-CCcCceEEEEccCccccccCCc
Confidence            35789999998754  68999999999999999999999999999999999999432 11234899999988654211  


Q ss_pred             -------ccceecccccccCccccc
Q psy11820         79 -------VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 -------~~~~~~~~~~~~~pe~~~   96 (98)
                             ......+++.|+|||++.
T Consensus       170 ~~~~~~~~~~~~~gt~~y~aPE~~~  194 (316)
T 2ac3_A          170 CSPISTPELLTPCGSAEYMAPEVVE  194 (316)
T ss_dssp             ------------CCSGGGCCHHHHH
T ss_pred             cccccccccccccCCcCccChHHhh
Confidence                   112345889999999874

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.77  E-value=1.2e-18  Score=100.12  Aligned_cols=92  Identities=24%  Similarity=0.309  Sum_probs=67.3

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC---CcccCCCCCcEEEecCCC----CCccEEEeeecCcee
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLG---LIHADLKPENIMLVDPVR----QPYRVKVIDFGSASH   74 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---~~h~~l~~~~~~~~~~~~----~~~~~~l~~~g~~~~   74 (98)
                      .+++|.+++...   .+++..+..++.|++.|+.|+|+.+   ++|+|+++.||++.....    ..+.+++.|||.+..
T Consensus        89 ~~~~L~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~  165 (271)
T 3dtc_A           89 RGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE  165 (271)
T ss_dssp             TTEEHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC---
T ss_pred             CCCCHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccc
Confidence            478999998643   5899999999999999999999999   889999999999943211    256799999999876


Q ss_pred             ecccccceecccccccCccccc
Q psy11820         75 VSKAVCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        75 ~~~~~~~~~~~~~~~~~pe~~~   96 (98)
                      ..........+++.|+|||.+.
T Consensus       166 ~~~~~~~~~~~~~~y~aPE~~~  187 (271)
T 3dtc_A          166 WHRTTKMSAAGAYAWMAPEVIR  187 (271)
T ss_dssp             ----------CCGGGSCHHHHH
T ss_pred             cccccccCCCCccceeCHHHhc
Confidence            5544334556889999999865

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=1.2e-18  Score=104.53  Aligned_cols=91  Identities=24%  Similarity=0.269  Sum_probs=66.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      +.+++|.+++.... ..++...+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++....... 
T Consensus       173 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~~~~kL~DFG~a~~~~~~~~  247 (373)
T 3c1x_A          173 MKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEF  247 (373)
T ss_dssp             CTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECCC-----------
T ss_pred             CCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEE----CCCCCEEEeecccccccccccc
Confidence            35789999997543 357889999999999999999999999999999999999    666789999999987543211 


Q ss_pred             -----cceecccccccCccccc
Q psy11820         80 -----CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 -----~~~~~~~~~~~~pe~~~   96 (98)
                           .....+++.|+|||++.
T Consensus       248 ~~~~~~~~~~~~~~y~aPE~~~  269 (373)
T 3c1x_A          248 DSVHNKTGAKLPVKWMALESLQ  269 (373)
T ss_dssp             ----------CCGGGSCHHHHH
T ss_pred             ccccccCCCCCcccccChHHhc
Confidence                 12234567899999875

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.77  E-value=2.3e-18  Score=100.81  Aligned_cols=90  Identities=29%  Similarity=0.382  Sum_probs=69.6

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++....  .+++..+..++.+++.|+.|+|+.+++|+|+++.||++    +..+.++|.|||++......   
T Consensus       117 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~----~~~~~~kl~Dfg~~~~~~~~~~~  190 (309)
T 2h34_A          117 NGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV----SADDFAYLVDFGIASATTDEKLT  190 (309)
T ss_dssp             CCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECSCCC----------
T ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEE----cCCCCEEEecCccCccccccccc
Confidence            4679999998654  68999999999999999999999999999999999999    66678999999988755332   


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       191 ~~~~~~~~~~y~aPE~~~~  209 (309)
T 2h34_A          191 QLGNTVGTLYYMAPERFSE  209 (309)
T ss_dssp             ------CCGGGCCGGGTCC
T ss_pred             cccccCCCcCccCHHHHcC
Confidence            1234467889999998754

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.77  E-value=1.2e-18  Score=104.43  Aligned_cols=94  Identities=26%  Similarity=0.384  Sum_probs=75.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++..  ...+.++|+|||++...... .
T Consensus       168 ~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~~~kl~DFG~a~~~~~~~~  244 (373)
T 2x4f_A          168 VDGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN--RDAKQIKIIDFGLARRYKPREK  244 (373)
T ss_dssp             CTTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE--TTTTEEEECCCSSCEECCTTCB
T ss_pred             CCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEec--CCCCcEEEEeCCCceecCCccc
Confidence            34789999886543 25889999999999999999999999999999999999843  23457999999999876432 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       245 ~~~~~gt~~y~aPE~~~~  262 (373)
T 2x4f_A          245 LKVNFGTPEFLAPEVVNY  262 (373)
T ss_dssp             CCCCCSSCTTCCHHHHTT
T ss_pred             cccccCCCcEeChhhccC
Confidence            234568999999998754

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.77  E-value=2.6e-18  Score=101.94  Aligned_cols=90  Identities=26%  Similarity=0.475  Sum_probs=73.5

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc-----
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-----   77 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-----   77 (98)
                      +++|.+.+.... ..+++..+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|.|||++.....     
T Consensus       107 ~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~----~~~~~~kl~Dfg~a~~~~~~~~~~  181 (351)
T 3mi9_A          107 EHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI----TRDGVLKLADFGLARAFSLAKNSQ  181 (351)
T ss_dssp             SEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECCCCSSSS
T ss_pred             CCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE----cCCCCEEEccchhccccccccccc
Confidence            467777776543 358999999999999999999999999999999999999    6667899999999876532     


Q ss_pred             -cccceecccccccCcccccC
Q psy11820         78 -AVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 -~~~~~~~~~~~~~~pe~~~~   97 (98)
                       .......+++.|+|||++.+
T Consensus       182 ~~~~~~~~gt~~y~aPE~~~~  202 (351)
T 3mi9_A          182 PNRYTNRVVTLWYRPPELLLG  202 (351)
T ss_dssp             CCCCCSSCSCGGGCCHHHHTT
T ss_pred             ccccCCcccccCccCchhhcC
Confidence             11234467899999998764

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.77  E-value=1.5e-18  Score=100.71  Aligned_cols=91  Identities=30%  Similarity=0.465  Sum_probs=70.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc----
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK----   77 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~----   77 (98)
                      .+++|.+++.... ..++...+..++.|++.|+.|||+++++|+|+++.||++    +..+.+++.|||.+.....    
T Consensus        98 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~----~~~~~~kl~dfg~~~~~~~~~~~  172 (303)
T 1zy4_A           98 ENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI----DESRNVKIGDFGLAKNVHRSLDI  172 (303)
T ss_dssp             CSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECCCCCCSCTTC----
T ss_pred             CCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEE----cCCCCEEEeeCcchhhcccccch
Confidence            4689999998643 357788999999999999999999999999999999999    6667899999998865421    


Q ss_pred             ------------cccceecccccccCcccccC
Q psy11820         78 ------------AVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 ------------~~~~~~~~~~~~~~pe~~~~   97 (98)
                                  .......+++.|+|||++.+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  204 (303)
T 1zy4_A          173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG  204 (303)
T ss_dssp             ---------------------CTTSCHHHHTS
T ss_pred             hccccccccccccccccCCCcccccCcccccC
Confidence                        11233457889999998753

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.77  E-value=1.1e-18  Score=101.95  Aligned_cols=91  Identities=21%  Similarity=0.293  Sum_probs=73.3

Q ss_pred             cchhHHHHHhhCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCC
Q psy11820          2 LEQNLYDFLKQNKF----------------------SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR   59 (98)
Q Consensus         2 ~~~~L~~~~~~~~~----------------------~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~   59 (98)
                      .+++|.+++.....                      ..+++..+..++.|++.|+.|||+++++|+|+++.||++    .
T Consensus       109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli----~  184 (314)
T 2ivs_A          109 KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV----A  184 (314)
T ss_dssp             TTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----E
T ss_pred             CCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEE----c
Confidence            46899999986542                      237889999999999999999999999999999999999    5


Q ss_pred             CCccEEEeeecCceeecccc----cceecccccccCccccc
Q psy11820         60 QPYRVKVIDFGSASHVSKAV----CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        60 ~~~~~~l~~~g~~~~~~~~~----~~~~~~~~~~~~pe~~~   96 (98)
                      ..+.++|.|||++.......    .....+++.|+|||++.
T Consensus       185 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  225 (314)
T 2ivs_A          185 EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLF  225 (314)
T ss_dssp             TTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHH
T ss_pred             CCCCEEEccccccccccccccceeccCCCCcccccChhhhc
Confidence            56689999999987653321    12334567899999864

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.77  E-value=5e-19  Score=104.70  Aligned_cols=92  Identities=24%  Similarity=0.414  Sum_probs=75.8

Q ss_pred             cchhHHHH------HhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820          2 LEQNLYDF------LKQNKFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus         2 ~~~~L~~~------~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .+++|.++      +.......+++..+..++.|++.|+.|+|+ .+++|+|+++.||++    +..+.++|.|||.+..
T Consensus       126 ~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~----~~~~~~kl~dfg~~~~  201 (348)
T 2pml_X          126 ENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM----DKNGRVKLSDFGESEY  201 (348)
T ss_dssp             TTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEE----CTTSCEEECCCTTCEE
T ss_pred             CCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEE----cCCCcEEEeccccccc
Confidence            35677777      554334578999999999999999999999 999999999999999    6667899999999987


Q ss_pred             ecccccceecccccccCcccccC
Q psy11820         75 VSKAVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        75 ~~~~~~~~~~~~~~~~~pe~~~~   97 (98)
                      ..........+++.|+|||++.+
T Consensus       202 ~~~~~~~~~~~~~~y~aPE~~~~  224 (348)
T 2pml_X          202 MVDKKIKGSRGTYEFMPPEFFSN  224 (348)
T ss_dssp             CBTTEECSSCSCGGGCCGGGGSS
T ss_pred             cccccccCCCCCcCccCchhhcC
Confidence            65443445568889999999865

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.77  E-value=2.6e-18  Score=99.74  Aligned_cols=90  Identities=29%  Similarity=0.363  Sum_probs=75.6

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||.+......  .
T Consensus        98 ~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~dfg~~~~~~~~~~~  171 (294)
T 2rku_A           98 RRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL----NEDLEVKIGDFGLATKVEYDGER  171 (294)
T ss_dssp             TTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEECCSTTCC
T ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEE----cCCCCEEEEeccCceecccCccc
Confidence            4689999887654  68999999999999999999999999999999999999    66678999999998765422  2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       172 ~~~~~~~~~y~aPE~~~~  189 (294)
T 2rku_A          172 KKVLCGTPNYIAPEVLSK  189 (294)
T ss_dssp             BCCCCSCCSSCCHHHHTT
T ss_pred             cccccCCCCcCCcchhcc
Confidence            234567889999998754

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.76  E-value=1.5e-18  Score=104.00  Aligned_cols=91  Identities=22%  Similarity=0.358  Sum_probs=65.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      +.+++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|+|||++....... 
T Consensus       128 ~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~~~~~~~~  202 (373)
T 2qol_A          128 MENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLGRVLEDDPE  202 (373)
T ss_dssp             CTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECCC-----------
T ss_pred             CCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE----cCCCCEEECcCccccccccCCc
Confidence            35789999997653 358999999999999999999999999999999999999    667789999999987653221 


Q ss_pred             ----cceecccccccCccccc
Q psy11820         80 ----CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ----~~~~~~~~~~~~pe~~~   96 (98)
                          .....+++.|+|||++.
T Consensus       203 ~~~~~~~~~~~~~y~aPE~~~  223 (373)
T 2qol_A          203 AAYTTRGGKIPIRWTSPEAIA  223 (373)
T ss_dssp             -----------CTTSCHHHHH
T ss_pred             cceeccCCCcCCCccChhhhc
Confidence                11123456799999875

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.76  E-value=1.4e-18  Score=101.49  Aligned_cols=91  Identities=27%  Similarity=0.335  Sum_probs=73.6

Q ss_pred             cchhHHHHHhhCCCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEE
Q psy11820          2 LEQNLYDFLKQNKFS----------------PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK   65 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~----------------~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~   65 (98)
                      .+++|.+++......                .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++
T Consensus       110 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~k  185 (313)
T 1t46_A          110 CYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL----THGRITK  185 (313)
T ss_dssp             TTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----ETTTEEE
T ss_pred             CCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEE----cCCCCEE
Confidence            478999999865421                48899999999999999999999999999999999999    5566899


Q ss_pred             EeeecCceeecccc----cceecccccccCccccc
Q psy11820         66 VIDFGSASHVSKAV----CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        66 l~~~g~~~~~~~~~----~~~~~~~~~~~~pe~~~   96 (98)
                      +.|||++.......    .....+++.|+|||++.
T Consensus       186 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  220 (313)
T 1t46_A          186 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF  220 (313)
T ss_dssp             ECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH
T ss_pred             EccccccccccccccceeccCCCCcceeeChHHhc
Confidence            99999987654321    12334667899999764

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.76  E-value=2.4e-18  Score=99.15  Aligned_cols=91  Identities=27%  Similarity=0.481  Sum_probs=61.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||.+......  .
T Consensus        94 ~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili----~~~~~~kl~dfg~~~~~~~~~~~  168 (278)
T 3cok_A           94 HNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL----TRNMNIKIADFGLATQLKMPHEK  168 (278)
T ss_dssp             TTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEE----CTTCCEEECCCTTCEECC-----
T ss_pred             CCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----cCCCCEEEEeecceeeccCCCCc
Confidence            4789999997642 368999999999999999999999999999999999999    66678999999998765422  2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       169 ~~~~~~~~~y~aPE~~~~  186 (278)
T 3cok_A          169 HYTLCGTPNYISPEIATR  186 (278)
T ss_dssp             ------------------
T ss_pred             ceeccCCCCcCCcchhcC
Confidence            234567889999998754

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.76  E-value=4.4e-19  Score=112.30  Aligned_cols=90  Identities=26%  Similarity=0.306  Sum_probs=71.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      |.+++|.+++....  .+++..+..++.|++.|+.|||+.+++|+||++.||++    +..+.++|+|||++......  
T Consensus       451 ~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl----~~~~~~kL~DFGla~~~~~~~~  524 (635)
T 4fl3_A          451 AELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL----VTQHYAKISDFGLSKALRADEN  524 (635)
T ss_dssp             CTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----EETTEEEECCTTHHHHTTC---
T ss_pred             cCCCCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEE----eCCCCEEEEEcCCccccccCcc
Confidence            46889999998754  68999999999999999999999999999999999999    55568999999998754321  


Q ss_pred             ---ccceecccccccCccccc
Q psy11820         79 ---VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ---~~~~~~~~~~~~~pe~~~   96 (98)
                         ......+++.|+|||++.
T Consensus       525 ~~~~~~~~~~t~~y~APE~~~  545 (635)
T 4fl3_A          525 YYKAQTHGKWPVKWYAPECIN  545 (635)
T ss_dssp             ----------CGGGSCHHHHH
T ss_pred             ccccccCCCCceeeeChhhhc
Confidence               112223567899999875

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=2.7e-18  Score=99.65  Aligned_cols=92  Identities=24%  Similarity=0.299  Sum_probs=74.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.+++.|||++......  
T Consensus       105 ~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili----~~~~~~kl~Dfg~~~~~~~~~~  179 (298)
T 3pls_A          105 MCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML----DESFTVKVADFGLARDILDREY  179 (298)
T ss_dssp             CTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTCCEEECCTTSSCTTTTGGG
T ss_pred             ccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE----cCCCcEEeCcCCCcccccCCcc
Confidence            35789999997643 368899999999999999999999999999999999999    66778999999998754221  


Q ss_pred             ----ccceecccccccCcccccC
Q psy11820         79 ----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ----~~~~~~~~~~~~~pe~~~~   97 (98)
                          ......+++.|+|||.+.+
T Consensus       180 ~~~~~~~~~~~~~~y~aPE~~~~  202 (298)
T 3pls_A          180 YSVQQHRHARLPVKWTALESLQT  202 (298)
T ss_dssp             GCSCCSSCTTCGGGGSCHHHHTT
T ss_pred             cccccCcCCCCCccccChhhhcc
Confidence                1223456778999998764

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.76  E-value=1.4e-18  Score=101.02  Aligned_cols=91  Identities=23%  Similarity=0.342  Sum_probs=74.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++......   
T Consensus       108 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  182 (302)
T 4e5w_A          108 PSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV----ESEHQVKIGDFGLTKAIETDKEY  182 (302)
T ss_dssp             TTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----EETTEEEECCCTTCEECCTTCCE
T ss_pred             CCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEE----cCCCCEEECcccccccccCCCcc
Confidence            4789999996543 358999999999999999999999999999999999999    55568999999998765432   


Q ss_pred             --ccceecccccccCcccccC
Q psy11820         79 --VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~~   97 (98)
                        ......++..|+|||++.+
T Consensus       183 ~~~~~~~~~~~~y~aPE~~~~  203 (302)
T 4e5w_A          183 YTVKDDRDSPVFWYAPECLMQ  203 (302)
T ss_dssp             EECCCCTTCCGGGCCHHHHHH
T ss_pred             eeccCCCCCCccccCCeeecC
Confidence              1223456777999998653

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.76  E-value=2.2e-18  Score=103.42  Aligned_cols=92  Identities=33%  Similarity=0.590  Sum_probs=72.6

Q ss_pred             chhHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          3 EQNLYDFLKQ--NKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         3 ~~~L~~~~~~--~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      .++|.+.+..  .....+++..+..++.|++.|+.|||+.+++|+|+++.||++..   ..+.++|+|||.+...... .
T Consensus       121 ~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~---~~~~~kl~Dfg~a~~~~~~~~  197 (383)
T 3eb0_A          121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS---KDNTLKLCDFGSAKKLIPSEP  197 (383)
T ss_dssp             SEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEET---TTTEEEECCCTTCEECCTTSC
T ss_pred             CccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcC---CCCcEEEEECCCCcccCCCCC
Confidence            3566666543  12346899999999999999999999999999999999999932   3458999999999865432 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       198 ~~~~~~t~~y~aPE~~~~  215 (383)
T 3eb0_A          198 SVAYICSRFYRAPELMLG  215 (383)
T ss_dssp             CCCCCCCSSCCCHHHHTT
T ss_pred             CcCcccCCCccCHHHhcC
Confidence            345567889999998764

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.76  E-value=3.4e-19  Score=110.90  Aligned_cols=92  Identities=26%  Similarity=0.356  Sum_probs=73.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      |.+|+|.+++.......+++..+..++.|++.||.|||+++++|+||++.||++    +..+.++|+|||++....... 
T Consensus       343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll----~~~~~~kl~DFG~a~~~~~~~~  418 (535)
T 2h8h_A          343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV----GENLVCKVADFGLARLIEDNEY  418 (535)
T ss_dssp             CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEECCTTSTTTCCCHHH
T ss_pred             hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE----cCCCcEEEcccccceecCCCce
Confidence            457899999975433358999999999999999999999999999999999999    666789999999987653221 


Q ss_pred             --cceecccccccCccccc
Q psy11820         80 --CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 --~~~~~~~~~~~~pe~~~   96 (98)
                        .....++..|+|||++.
T Consensus       419 ~~~~~~~~~~~y~aPE~~~  437 (535)
T 2h8h_A          419 TARQGAKFPIKWTAPEAAL  437 (535)
T ss_dssp             HTTCSTTSCGGGSCHHHHH
T ss_pred             ecccCCcCcccccCHHHhc
Confidence              12233456799999864

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.76  E-value=3.1e-18  Score=98.12  Aligned_cols=89  Identities=11%  Similarity=0.115  Sum_probs=73.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~   79 (98)
                      .+++|.+++.......+++..+..++.|++.|+.|||+.+  ++|+|+++.||++    +..+.+++.+|+++.....  
T Consensus        92 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~----~~~~~~~l~~~~~~~~~~~--  165 (271)
T 3kmu_A           92 PYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMI----DEDMTARISMADVKFSFQS--  165 (271)
T ss_dssp             TTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEE----CTTSCEEEEGGGSCCTTSC--
T ss_pred             CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEE----cCCcceeEEeccceeeecc--
Confidence            4789999998765446899999999999999999999999  9999999999999    6666788888887654222  


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                       ....+++.|+|||++.+
T Consensus       166 -~~~~~t~~y~aPE~~~~  182 (271)
T 3kmu_A          166 -PGRMYAPAWVAPEALQK  182 (271)
T ss_dssp             -TTCBSCGGGSCHHHHHS
T ss_pred             -cCccCCccccChhhhcc
Confidence             23456889999998764

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.76  E-value=1.7e-18  Score=99.46  Aligned_cols=90  Identities=20%  Similarity=0.283  Sum_probs=73.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++.... ..++...+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||++......   
T Consensus        88 ~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  162 (269)
T 4hcu_A           88 EHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV----GENQVIKVSDFGMTRFVLDDQYT  162 (269)
T ss_dssp             TTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CGGGCEEECCTTGGGGBCCHHHH
T ss_pred             CCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEE----cCCCCEEeccccccccccccccc
Confidence            5789999997643 358999999999999999999999999999999999999    56678999999998754322   


Q ss_pred             ccceecccccccCccccc
Q psy11820         79 VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~   96 (98)
                      ......+++.|+|||++.
T Consensus       163 ~~~~~~~~~~y~aPE~~~  180 (269)
T 4hcu_A          163 SSTGTKFPVKWASPEVFS  180 (269)
T ss_dssp             STTSTTCCGGGCCHHHHH
T ss_pred             cccCcccccccCCHHHhc
Confidence            112334566799999875

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.76  E-value=2.1e-18  Score=104.69  Aligned_cols=92  Identities=33%  Similarity=0.657  Sum_probs=71.1

Q ss_pred             chhHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          3 EQNLYDFLKQ--NKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         3 ~~~L~~~~~~--~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      .++|.+.+..  .....+++..+..++.|++.||.|||+.+++|+||++.||++..   ....++|.|||++...... .
T Consensus       136 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~---~~~~~kl~DFG~a~~~~~~~~  212 (420)
T 1j1b_A          136 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP---DTAVLKLCDFGSAKQLVRGEP  212 (420)
T ss_dssp             CEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEET---TTTEEEECCCTTCEECCTTCC
T ss_pred             cccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeC---CCCeEEeccchhhhhcccCCC
Confidence            3456555542  12336899999999999999999999999999999999999932   2346899999999865432 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       213 ~~~~~~t~~y~aPE~~~~  230 (420)
T 1j1b_A          213 NVSYICSRYYRAPELIFG  230 (420)
T ss_dssp             CCSCCSCTTSCCHHHHTT
T ss_pred             ceeeeeCCCcCCHHHHcC
Confidence            344568899999998764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.76  E-value=1.7e-18  Score=100.46  Aligned_cols=91  Identities=30%  Similarity=0.400  Sum_probs=66.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc---
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK---   77 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---   77 (98)
                      +.+++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|.|||++.....   
T Consensus       101 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~  175 (289)
T 3og7_A          101 CEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL----HEDNTVKIGDFGLATEKSRWSG  175 (289)
T ss_dssp             CCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----ETTTEEEECCCC----------
T ss_pred             cCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE----CCCCCEEEccceeccccccccc
Confidence            35789999996543 358999999999999999999999999999999999999    5566899999999875432   


Q ss_pred             -cccceecccccccCccccc
Q psy11820         78 -AVCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        78 -~~~~~~~~~~~~~~pe~~~   96 (98)
                       .......+++.|+|||++.
T Consensus       176 ~~~~~~~~gt~~y~aPE~~~  195 (289)
T 3og7_A          176 SHQFEQLSGSILWMAPEVIR  195 (289)
T ss_dssp             --------CCCTTCCHHHHC
T ss_pred             cccccccCCCccccCchhhc
Confidence             1223446789999999875

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.76  E-value=1.3e-18  Score=102.13  Aligned_cols=92  Identities=23%  Similarity=0.256  Sum_probs=67.8

Q ss_pred             cchhHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc
Q psy11820          2 LEQNLYDFLKQNK----FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK   77 (98)
Q Consensus         2 ~~~~L~~~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~   77 (98)
                      .+++|.+++....    ...+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++.....
T Consensus       114 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli----~~~~~~kl~Dfg~a~~~~~  189 (323)
T 3qup_A          114 KHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML----AEDMTVCVADFGLSRKIYS  189 (323)
T ss_dssp             TTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTSCEEECCCCC------
T ss_pred             cCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEE----cCCCCEEEeeccccccccc
Confidence            4779999886432    1248899999999999999999999999999999999999    6667899999999876532


Q ss_pred             cc----cceecccccccCcccccC
Q psy11820         78 AV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 ~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      ..    .....+++.|+|||++.+
T Consensus       190 ~~~~~~~~~~~~~~~y~aPE~~~~  213 (323)
T 3qup_A          190 GDYYRQGCASKLPVKWLALESLAD  213 (323)
T ss_dssp             -----------CCGGGCCHHHHHH
T ss_pred             cccccccccccCcccccCchhhcC
Confidence            21    122345678999998653

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=2e-18  Score=102.38  Aligned_cols=91  Identities=32%  Similarity=0.512  Sum_probs=74.6

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      ++++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|+|||++......  .
T Consensus        94 ~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~----~~~~~~kl~Dfg~a~~~~~~~~~  168 (346)
T 1ua2_A           94 METDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL----DENGVLKLADFGLAKSFGSPNRA  168 (346)
T ss_dssp             CSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECCCGGGSTTTSCCCC
T ss_pred             CCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEE----cCCCCEEEEecccceeccCCccc
Confidence            3468888887543 358889999999999999999999999999999999999    66678999999998765322  2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       169 ~~~~~~t~~y~aPE~~~~  186 (346)
T 1ua2_A          169 YTHQVVTRWYRAPELLFG  186 (346)
T ss_dssp             CCCSCCCCTTCCHHHHTT
T ss_pred             CCcccccccccCchHhhC
Confidence            234567899999998754

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.76  E-value=4.6e-18  Score=99.08  Aligned_cols=89  Identities=31%  Similarity=0.482  Sum_probs=75.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++...   .++...+..++.+++.|+.|+|+.+++|+|+++.||++    ...+.++|.|||.+......  .
T Consensus       103 ~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  175 (303)
T 3a7i_A          103 GGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL----SEHGEVKLADFGVAGQLTDTQIK  175 (303)
T ss_dssp             TTEEHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECBTTBCC
T ss_pred             CCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEE----CCCCCEEEeecccceecCccccc
Confidence            467999998743   58999999999999999999999999999999999999    66678999999998765432  2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       176 ~~~~~~~~~y~aPE~~~~  193 (303)
T 3a7i_A          176 RNTFVGTPFWMAPEVIKQ  193 (303)
T ss_dssp             BCCCCSCGGGCCHHHHTT
T ss_pred             cCccCCCcCccCHHHHhc
Confidence            234567889999998754

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.76  E-value=3.5e-18  Score=99.26  Aligned_cols=89  Identities=33%  Similarity=0.547  Sum_probs=75.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||.+...... ..
T Consensus       107 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~dfg~~~~~~~~~~~  180 (298)
T 1phk_A          107 KKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL----DDDMNIKLTDFGFSCQLDPGEKL  180 (298)
T ss_dssp             TTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCTTCEECCTTCCB
T ss_pred             CCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE----cCCCcEEEecccchhhcCCCccc
Confidence            4689999998654  68999999999999999999999999999999999999    66678999999998765432 23


Q ss_pred             ceecccccccCccccc
Q psy11820         81 NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~   96 (98)
                      ....+++.|+|||++.
T Consensus       181 ~~~~~~~~y~aPE~~~  196 (298)
T 1phk_A          181 REVCGTPSYLAPEIIE  196 (298)
T ss_dssp             CCCCSCGGGCCHHHHH
T ss_pred             ccccCCccccCHHHhc
Confidence            4456788999999864

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.76  E-value=4.1e-18  Score=100.48  Aligned_cols=90  Identities=31%  Similarity=0.486  Sum_probs=69.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.++.....  .+++..+..++.+++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++......  .
T Consensus       107 ~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  180 (331)
T 4aaa_A          107 DHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV----SQSGVVKLCDFGFARTLAAPGEV  180 (331)
T ss_dssp             SEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECCCTTC---------
T ss_pred             CcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEE----cCCCcEEEEeCCCceeecCCccc
Confidence            4567777765443  68999999999999999999999999999999999999    66678999999998765322  2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       181 ~~~~~~t~~y~aPE~~~~  198 (331)
T 4aaa_A          181 YDDEVATRWYRAPELLVG  198 (331)
T ss_dssp             ---CCCCCTTCCHHHHTT
T ss_pred             cCCCcCCccccCcccccC
Confidence            234567889999998754

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.76  E-value=1.2e-18  Score=102.31  Aligned_cols=91  Identities=22%  Similarity=0.277  Sum_probs=73.6

Q ss_pred             cchhHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-
Q psy11820          2 LEQNLYDFLKQNKF--SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-   78 (98)
                      .+++|.+++.....  ..+++..+..++.|++.|+.|+|+++++|+|+++.||++    +..+.+++.|||++...... 
T Consensus       118 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~  193 (321)
T 2qkw_B          118 ENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL----DENFVPKITDFGISKKGTELD  193 (321)
T ss_dssp             TTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEE----CTTCCEEECCCTTCEECSSSS
T ss_pred             CCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEE----CCCCCEEEeeccccccccccc
Confidence            46788888865432  248899999999999999999999999999999999999    66778999999998764321 


Q ss_pred             ---ccceecccccccCccccc
Q psy11820         79 ---VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ---~~~~~~~~~~~~~pe~~~   96 (98)
                         ......+++.|+|||++.
T Consensus       194 ~~~~~~~~~gt~~y~aPE~~~  214 (321)
T 2qkw_B          194 QTHLSTVVKGTLGYIDPEYFI  214 (321)
T ss_dssp             CCCCBCCCEEETTTCCHHHHH
T ss_pred             ccccccccCCCccccCHHHhc
Confidence               122345788999999864

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.76  E-value=2.4e-18  Score=101.07  Aligned_cols=89  Identities=26%  Similarity=0.338  Sum_probs=73.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++....   +++..+..++.+++.|+.|||+.+++|+|+++.||++    +..+.++|.|||.+......   
T Consensus       118 ~~~~L~~~l~~~~---~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~----~~~~~~kl~Dfg~a~~~~~~~~~  190 (318)
T 3lxp_A          118 PLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL----DNDRLVKIGDFGLAKAVPEGHEY  190 (318)
T ss_dssp             TTCBHHHHGGGSC---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCGGGCEECCTTCSE
T ss_pred             cCCcHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE----cCCCCEEECCccccccccccccc
Confidence            4689999997653   8999999999999999999999999999999999999    66678999999998765432   


Q ss_pred             --ccceecccccccCcccccC
Q psy11820         79 --VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~~   97 (98)
                        ......+++.|+|||++.+
T Consensus       191 ~~~~~~~~~~~~y~aPE~~~~  211 (318)
T 3lxp_A          191 YRVREDGDSPVFWYAPECLKE  211 (318)
T ss_dssp             EEC---CCCCGGGCCHHHHHH
T ss_pred             cccccCCCCCceeeChHHhcC
Confidence              1223456778999998753

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.76  E-value=2.8e-18  Score=99.70  Aligned_cols=91  Identities=32%  Similarity=0.572  Sum_probs=75.6

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      +++|.+++.......++...+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||.+......  ..
T Consensus        85 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~kl~dfg~~~~~~~~~~~~  160 (299)
T 2r3i_A           85 HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAIKLADFGLARAFGVPVRTY  160 (299)
T ss_dssp             SEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECSTTHHHHHCCCSBCT
T ss_pred             cCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEE----cCCCCEEECcchhhhhccCCcccc
Confidence            4789999987755578999999999999999999999999999999999999    66678999999988654322  22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       161 ~~~~~~~~y~aPE~~~~  177 (299)
T 2r3i_A          161 THEVVTLWYRAPEILLG  177 (299)
T ss_dssp             TSCBCCCTTCCHHHHTT
T ss_pred             CcccccccccCcHHhhc
Confidence            33457889999998754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.75  E-value=1.8e-18  Score=99.90  Aligned_cols=90  Identities=20%  Similarity=0.295  Sum_probs=73.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||++......   
T Consensus       102 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili----~~~~~~kl~Dfg~~~~~~~~~~~  176 (283)
T 3gen_A          102 ANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV----NDQGVVKVSDFGLSRYVLDDEYT  176 (283)
T ss_dssp             TTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE----CTTSCEEECSTTGGGGBCCHHHH
T ss_pred             CCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEE----cCCCCEEEccccccccccccccc
Confidence            4789999997632 258999999999999999999999999999999999999    66778999999998755322   


Q ss_pred             ccceecccccccCccccc
Q psy11820         79 VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~   96 (98)
                      ......+++.|+|||++.
T Consensus       177 ~~~~~~~~~~y~aPE~~~  194 (283)
T 3gen_A          177 SSVGSKFPVRWSPPEVLM  194 (283)
T ss_dssp             STTSTTSCGGGCCHHHHH
T ss_pred             cccCCccCcccCCHHHhc
Confidence            112234567799999875

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.75  E-value=7.1e-18  Score=97.57  Aligned_cols=93  Identities=23%  Similarity=0.326  Sum_probs=73.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecCCC-CCccEEEeeecCceeeccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLG--LIHADLKPENIMLVDPVR-QPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--~~h~~l~~~~~~~~~~~~-~~~~~~l~~~g~~~~~~~~   78 (98)
                      .+++|.+++.... ..+++..+..++.|++.|+.|+|+.+  ++|+|+++.||++..... ....++|.|||++......
T Consensus       104 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~  182 (287)
T 4f0f_A          104 PCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS  182 (287)
T ss_dssp             TTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSC
T ss_pred             CCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccccccc
Confidence            4689999886543 36899999999999999999999999  999999999999943321 1223899999998754332


Q ss_pred             ccceecccccccCccccc
Q psy11820         79 VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~   96 (98)
                       .....+++.|+|||++.
T Consensus       183 -~~~~~g~~~y~aPE~~~  199 (287)
T 4f0f_A          183 -VSGLLGNFQWMAPETIG  199 (287)
T ss_dssp             -EECCCCCCTTSCGGGSS
T ss_pred             -ccccCCCccccCchhhc
Confidence             23456889999999873

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.75  E-value=1.8e-18  Score=99.52  Aligned_cols=90  Identities=27%  Similarity=0.476  Sum_probs=74.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++....  .++...+..++.|++.|+.|+|+.+++|+|+++.||++    ...+.+++.|||.+......   
T Consensus        88 ~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~dfg~~~~~~~~~~~  161 (276)
T 2yex_A           88 SGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRE  161 (276)
T ss_dssp             TTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCTTCEECEETTEE
T ss_pred             CCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEE----ccCCCEEEeeCCCccccCCCcch
Confidence            4678888886543  68999999999999999999999999999999999999    66678999999998764321   


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+++.|+|||++.+
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~  181 (276)
T 2yex_A          162 RLLNKMCGTLPYVAPELLKR  181 (276)
T ss_dssp             CCBCCCCSCGGGCCGGGGTC
T ss_pred             hcccCCccccCccChHHHhc
Confidence             1234567889999998764

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.75  E-value=6.9e-19  Score=101.48  Aligned_cols=91  Identities=24%  Similarity=0.319  Sum_probs=73.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++.......+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||.+.......  
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  165 (279)
T 1qpc_A           90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV----SDTLSCKIADFGLARLIEDNEYT  165 (279)
T ss_dssp             TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTSCEEECCCTTCEECSSSCEE
T ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEE----cCCCCEEECCCcccccccCcccc
Confidence            47899999865432258899999999999999999999999999999999999    666789999999987654321  


Q ss_pred             -cceecccccccCccccc
Q psy11820         80 -CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 -~~~~~~~~~~~~pe~~~   96 (98)
                       .....++..|+|||++.
T Consensus       166 ~~~~~~~~~~y~aPE~~~  183 (279)
T 1qpc_A          166 AREGAKFPIKWTAPEAIN  183 (279)
T ss_dssp             CCTTCCCCTTTSCHHHHH
T ss_pred             cccCCCCccCccChhhhc
Confidence             12234566799999864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.75  E-value=4.2e-18  Score=100.54  Aligned_cols=91  Identities=21%  Similarity=0.308  Sum_probs=73.3

Q ss_pred             cchhHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEe
Q psy11820          2 LEQNLYDFLKQNKF--------------SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI   67 (98)
Q Consensus         2 ~~~~L~~~~~~~~~--------------~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~   67 (98)
                      .+++|.+++.....              ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.
T Consensus       124 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kL~  199 (334)
T 2pvf_A          124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TENNVMKIA  199 (334)
T ss_dssp             TTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEEC
T ss_pred             CCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEE----cCCCCEEEc
Confidence            46899999986531              248889999999999999999999999999999999999    666789999


Q ss_pred             eecCceeecccc----cceecccccccCccccc
Q psy11820         68 DFGSASHVSKAV----CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        68 ~~g~~~~~~~~~----~~~~~~~~~~~~pe~~~   96 (98)
                      |||++.......    .....+++.|+|||++.
T Consensus       200 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  232 (334)
T 2pvf_A          200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALF  232 (334)
T ss_dssp             CCTTCEECTTTSSEECCSCCCCCGGGCCHHHHH
T ss_pred             cccccccccccccccccCCCCcccceeChHHhc
Confidence            999987654321    12234567899999864

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.75  E-value=9.2e-19  Score=101.31  Aligned_cols=93  Identities=24%  Similarity=0.289  Sum_probs=72.6

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCC----CCccEEEeeecCceeecc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR----QPYRVKVIDFGSASHVSK   77 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~----~~~~~~l~~~g~~~~~~~   77 (98)
                      .+++|.+++.... ..++...+..++.|++.|+.|||+++++|+|+++.||++.....    ....+++.|||.+.....
T Consensus        95 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~  173 (289)
T 4fvq_A           95 KFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP  173 (289)
T ss_dssp             TTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSC
T ss_pred             CCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccC
Confidence            4789999998754 24889999999999999999999999999999999999954321    111299999998864422


Q ss_pred             cccceecccccccCcccccC
Q psy11820         78 AVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 ~~~~~~~~~~~~~~pe~~~~   97 (98)
                      .  ....+++.|+|||++.+
T Consensus       174 ~--~~~~~~~~y~aPE~~~~  191 (289)
T 4fvq_A          174 K--DILQERIPWVPPECIEN  191 (289)
T ss_dssp             H--HHHHHTTTTSCHHHHHC
T ss_pred             c--cccCCcCcccCHHHhCC
Confidence            1  23456788999998754

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.75  E-value=1.1e-18  Score=101.97  Aligned_cols=91  Identities=29%  Similarity=0.293  Sum_probs=73.5

Q ss_pred             cchhHHHHHhhCCCC--------------CCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEe
Q psy11820          2 LEQNLYDFLKQNKFS--------------PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI   67 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~--------------~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~   67 (98)
                      .+++|.+++......              .++...+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.
T Consensus       115 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~----~~~~~~kl~  190 (316)
T 2xir_A          115 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKIC  190 (316)
T ss_dssp             TTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEEC
T ss_pred             CCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE----CCCCCEEEC
Confidence            468999999865421              27889999999999999999999999999999999999    566789999


Q ss_pred             eecCceeeccc----ccceecccccccCccccc
Q psy11820         68 DFGSASHVSKA----VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        68 ~~g~~~~~~~~----~~~~~~~~~~~~~pe~~~   96 (98)
                      |||++......    ......+++.|+|||++.
T Consensus       191 Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  223 (316)
T 2xir_A          191 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIF  223 (316)
T ss_dssp             CCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH
T ss_pred             CCccccccccCccceeccCCCcceeecCchhhc
Confidence            99998754322    112345677899999864

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.75  E-value=4.7e-18  Score=99.11  Aligned_cols=92  Identities=27%  Similarity=0.358  Sum_probs=75.3

Q ss_pred             cchhHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          2 LEQNLYDFLKQNK-FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      .+++|.+++.... ...+++..+..++.+++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||++......  
T Consensus       113 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~kl~Dfg~~~~~~~~~~  188 (307)
T 2nru_A          113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL----DEAFTAKISDFGLARASEKFAQ  188 (307)
T ss_dssp             TTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTCCEEECCCTTCEECCSCSS
T ss_pred             CCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE----cCCCcEEEeecccccccccccc
Confidence            5789999987432 3368999999999999999999999999999999999999    66678999999998765321  


Q ss_pred             --ccceecccccccCcccccC
Q psy11820         79 --VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~~   97 (98)
                        ......+++.|+|||++.+
T Consensus       189 ~~~~~~~~g~~~y~aPE~~~~  209 (307)
T 2nru_A          189 TVMTSRIVGTTAYMAPEALRG  209 (307)
T ss_dssp             CEECSSCCSCGGGCCHHHHTT
T ss_pred             cccccccCCCcCcCChHHhcC
Confidence              1123467889999998754

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.75  E-value=3.8e-18  Score=103.99  Aligned_cols=94  Identities=23%  Similarity=0.365  Sum_probs=70.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCC-CCCccEEEeeecCceeeccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV-RQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~-~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      ++++|.+++..... .+....+..++.|++.|+.|||+.+++|+|+++.||++.... .....++|+|||++......  
T Consensus       100 ~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~  178 (432)
T 3p23_A          100 CAATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH  178 (432)
T ss_dssp             CSEEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred             CCCCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence            46799999986542 355556788999999999999999999999999999995432 22346889999998765321  


Q ss_pred             ---ccceecccccccCccccc
Q psy11820         79 ---VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ---~~~~~~~~~~~~~pe~~~   96 (98)
                         ......+++.|+|||++.
T Consensus       179 ~~~~~~~~~gt~~y~APE~l~  199 (432)
T 3p23_A          179 SFSRRSGVPGTEGWIAPEMLS  199 (432)
T ss_dssp             -------CCSCTTSCCGGGTS
T ss_pred             ceeeccccCCCcCccChhhhh
Confidence               223456899999999986

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.75  E-value=5e-18  Score=100.60  Aligned_cols=88  Identities=31%  Similarity=0.525  Sum_probs=72.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++...   .+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++......   
T Consensus        96 ~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~----~~~~~~kl~Dfg~a~~~~~~~~~  168 (353)
T 2b9h_A           96 MQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI----NSNCDLKVCDFGLARIIDESAAD  168 (353)
T ss_dssp             CSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTCCEEECCCTTCEECC-----
T ss_pred             cCccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----cCCCcEEEEeccccccccccccc
Confidence            357899988763   58999999999999999999999999999999999999    66678999999998765321   


Q ss_pred             ---------ccceecccccccCccccc
Q psy11820         79 ---------VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ---------~~~~~~~~~~~~~pe~~~   96 (98)
                               ......+++.|+|||++.
T Consensus       169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~  195 (353)
T 2b9h_A          169 NSEPTGQQSGMVEFVATRWYRAPEVML  195 (353)
T ss_dssp             -----------CCCCCCGGGCCHHHHH
T ss_pred             ccCccccccchhhccccccccCCeeec
Confidence                     112246788999999864

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.75  E-value=4.1e-18  Score=101.92  Aligned_cols=88  Identities=36%  Similarity=0.694  Sum_probs=65.0

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      ++++|.+++..    .+++..+..++.|++.|+.|||+.+++|+|+++.||++    ...+.++|+|||++...... ..
T Consensus       112 ~~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~----~~~~~~kl~Dfg~a~~~~~~~~~  183 (371)
T 2xrw_A          112 MDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAGTSFMM  183 (371)
T ss_dssp             CSEEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECCCCC----------
T ss_pred             CCCCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE----cCCCCEEEEEeeccccccccccc
Confidence            35678888752    48899999999999999999999999999999999999    66678999999998765432 22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       184 ~~~~gt~~y~aPE~~~~  200 (371)
T 2xrw_A          184 TPYVVTRYYRAPEVILG  200 (371)
T ss_dssp             ------CTTCCHHHHTT
T ss_pred             CCceecCCccCHHHhcC
Confidence            34568899999999764

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.75  E-value=6.9e-19  Score=101.47  Aligned_cols=90  Identities=24%  Similarity=0.291  Sum_probs=68.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      .+++|.+++.......+++..+..++.+++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||++....... .
T Consensus        98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~~l~Dfg~~~~~~~~~-~  172 (278)
T 1byg_A           98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV----SEDNVAKVSDFGLTKEASSTQ-D  172 (278)
T ss_dssp             TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTSCEEECCCCC----------
T ss_pred             CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEE----eCCCcEEEeeccccccccccc-c
Confidence            46799999976543347889999999999999999999999999999999999    666789999999887543321 2


Q ss_pred             eecccccccCccccc
Q psy11820         82 TYLQSRYYRAPEIIL   96 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~   96 (98)
                      ...+++.|+|||++.
T Consensus       173 ~~~~~~~y~aPE~~~  187 (278)
T 1byg_A          173 TGKLPVKWTAPEALR  187 (278)
T ss_dssp             ---CCTTTSCHHHHH
T ss_pred             CCCccccccCHHHhC
Confidence            334677899999864

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.75  E-value=5.3e-18  Score=98.25  Aligned_cols=95  Identities=26%  Similarity=0.413  Sum_probs=71.5

Q ss_pred             cchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-
Q psy11820          2 LEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-   78 (98)
Q Consensus         2 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-   78 (98)
                      .+++|.+++...  ....+++..+..++.|++.|+.|||+.+++|+|+++.||++... ...+.++|.|||++...... 
T Consensus       103 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~-~~~~~~kl~Dfg~a~~~~~~~  181 (285)
T 3is5_A          103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDT-SPHSPIKIIDFGLAELFKSDE  181 (285)
T ss_dssp             SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSS-STTCCEEECCCCCCCC-----
T ss_pred             CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecC-CCCCCEEEEeeecceecCCcc
Confidence            467899888543  12368999999999999999999999999999999999999432 23457999999998765432 


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       182 ~~~~~~~t~~y~aPE~~~~  200 (285)
T 3is5_A          182 HSTNAAGTALYMAPEVFKR  200 (285)
T ss_dssp             -----CTTGGGCCHHHHTT
T ss_pred             cCcCcccccCcCChHHhcc
Confidence            2344568889999998753

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.75  E-value=3.1e-18  Score=101.86  Aligned_cols=87  Identities=39%  Similarity=0.572  Sum_probs=72.5

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccce
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT   82 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~   82 (98)
                      .|+|.+++.... ..+++..+..++.+++.|+.|||+++++|+|+++.||++    +..+.++|+|||++......  ..
T Consensus       137 ~g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kL~DfG~a~~~~~~--~~  209 (348)
T 1u5q_A          137 LGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL----SEPGLVKLGDFGSASIMAPA--NS  209 (348)
T ss_dssp             SEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEE----ETTTEEEECCCTTCBSSSSB--CC
T ss_pred             CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE----CCCCCEEEeeccCceecCCC--Cc
Confidence            467888775432 368999999999999999999999999999999999999    55668999999998765332  34


Q ss_pred             ecccccccCccccc
Q psy11820         83 YLQSRYYRAPEIIL   96 (98)
Q Consensus        83 ~~~~~~~~~pe~~~   96 (98)
                      ..+++.|+|||++.
T Consensus       210 ~~gt~~y~aPE~~~  223 (348)
T 1u5q_A          210 FVGTPYWMAPEVIL  223 (348)
T ss_dssp             CCSCGGGCCHHHHH
T ss_pred             ccCCcceeCHhhhc
Confidence            56889999999874

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.75  E-value=2.1e-18  Score=101.31  Aligned_cols=91  Identities=31%  Similarity=0.460  Sum_probs=73.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-C   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~   80 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|||+++++|+|+++.||++... .....++|.|||++....... .
T Consensus        97 ~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~-~~~~~~kl~Dfg~~~~~~~~~~~  173 (322)
T 2ycf_A           97 EGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ-EEDCLIKITDFGHSKILGETSLM  173 (322)
T ss_dssp             TTEETHHHHSTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS-SSSCCEEECCCTTCEECCCCHHH
T ss_pred             CCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecC-CCCCeEEEccCccceeccccccc
Confidence            4679999887644  68999999999999999999999999999999999999432 123359999999987654321 2


Q ss_pred             ceecccccccCcccc
Q psy11820         81 NTYLQSRYYRAPEII   95 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~   95 (98)
                      ....+++.|+|||++
T Consensus       174 ~~~~gt~~y~aPE~~  188 (322)
T 2ycf_A          174 RTLCGTPTYLAPEVL  188 (322)
T ss_dssp             HHHHSCCTTCCHHHH
T ss_pred             ccccCCcCccCchhh
Confidence            344678899999986

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.75  E-value=2.1e-18  Score=101.14  Aligned_cols=91  Identities=20%  Similarity=0.341  Sum_probs=72.6

Q ss_pred             cchhHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820          2 LEQNLYDFLKQNK--------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus         2 ~~~~L~~~~~~~~--------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      .+++|.+++....        ...++...+..++.|++.|+.|+|+++++|+|+++.||++    ...+.++|.|||++.
T Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli----~~~~~~kl~Dfg~~~  186 (322)
T 1p4o_A          111 TRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTR  186 (322)
T ss_dssp             TTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE----CTTCCEEECCTTCCC
T ss_pred             CCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEE----cCCCeEEECcCcccc
Confidence            4679999886531        1357889999999999999999999999999999999999    666789999999987


Q ss_pred             eecccc----cceecccccccCccccc
Q psy11820         74 HVSKAV----CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        74 ~~~~~~----~~~~~~~~~~~~pe~~~   96 (98)
                      ......    .....+++.|+|||++.
T Consensus       187 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  213 (322)
T 1p4o_A          187 DIYETDYYRKGGKGLLPVRWMSPESLK  213 (322)
T ss_dssp             GGGGGGCEEGGGSSEECGGGCCHHHHH
T ss_pred             ccccccccccccCCCCCCCccChhhhc
Confidence            543221    12334577899999875

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.75  E-value=3.2e-18  Score=98.19  Aligned_cols=90  Identities=22%  Similarity=0.262  Sum_probs=73.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc-
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-   80 (98)
                      .+++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||.+........ 
T Consensus        86 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~----~~~~~~~l~Dfg~~~~~~~~~~~  160 (268)
T 3sxs_A           86 SNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV----DRDLCVKVSDFGMTRYVLDDQYV  160 (268)
T ss_dssp             TTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEE----CTTCCEEECCTTCEEECCTTCEE
T ss_pred             CCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEE----CCCCCEEEccCccceecchhhhh
Confidence            4789999997653 258999999999999999999999999999999999999    6677899999999876543321 


Q ss_pred             --ceecccccccCccccc
Q psy11820         81 --NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 --~~~~~~~~~~~pe~~~   96 (98)
                        ....+++.|+|||++.
T Consensus       161 ~~~~~~~~~~y~aPE~~~  178 (268)
T 3sxs_A          161 SSVGTKFPVKWSAPEVFH  178 (268)
T ss_dssp             ECCSCCCCGGGCCHHHHH
T ss_pred             cccCCCcCcccCCHHHHh
Confidence              2223456799999865

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.75  E-value=3e-18  Score=100.84  Aligned_cols=91  Identities=25%  Similarity=0.277  Sum_probs=71.8

Q ss_pred             cchhHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEe
Q psy11820          2 LEQNLYDFLKQNK--------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI   67 (98)
Q Consensus         2 ~~~~L~~~~~~~~--------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~   67 (98)
                      .+++|.+++....              ...+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.
T Consensus       109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~----~~~~~~kL~  184 (327)
T 1fvr_A          109 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV----GENYVAKIA  184 (327)
T ss_dssp             TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CGGGCEEEC
T ss_pred             CCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEE----cCCCeEEEc
Confidence            4789999997543              2368999999999999999999999999999999999999    666789999


Q ss_pred             eecCceeeccc-ccceecccccccCccccc
Q psy11820         68 DFGSASHVSKA-VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        68 ~~g~~~~~~~~-~~~~~~~~~~~~~pe~~~   96 (98)
                      |||++...... ......+++.|+|||++.
T Consensus       185 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  214 (327)
T 1fvr_A          185 DFGLSRGQEVYVKKTMGRLPVRWMAIESLN  214 (327)
T ss_dssp             CTTCEESSCEECCC----CCTTTCCHHHHH
T ss_pred             ccCcCccccccccccCCCCCccccChhhhc
Confidence            99998643221 112334567899999864

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.74  E-value=6.1e-18  Score=100.65  Aligned_cols=91  Identities=25%  Similarity=0.505  Sum_probs=67.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    ...+.++|.|||++...... ..
T Consensus       116 ~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~----~~~~~~kl~Dfg~~~~~~~~~~~  190 (362)
T 3pg1_A          116 MRTDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL----ADNNDITICDFNLAREDTADANK  190 (362)
T ss_dssp             CSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECCTTC----------
T ss_pred             CCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEE----cCCCCEEEEecCccccccccccc
Confidence            3578888887543 368999999999999999999999999999999999999    66678999999998754332 22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       191 ~~~~~t~~y~aPE~~~~  207 (362)
T 3pg1_A          191 THYVTHRWYRAPELVMQ  207 (362)
T ss_dssp             -----CGGGCCHHHHTT
T ss_pred             ceecccceecCcHHhcC
Confidence            34567889999998754

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.74  E-value=2e-18  Score=108.94  Aligned_cols=91  Identities=23%  Similarity=0.317  Sum_probs=71.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      +.+|+|.+++.... ..+++..+..++.|++.|+.|||+++++|+||++.||++    +..+.++|+|||++....... 
T Consensus       417 ~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl----~~~~~vkL~DFGla~~~~~~~~  491 (613)
T 2ozo_A          417 AGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLL----VNRHYAKISDFGLSKALGADDS  491 (613)
T ss_dssp             CTTCBHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----EETTEEEECCCSTTTTCC----
T ss_pred             CCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEE----cCCCcEEEeeccCcccccCCCc
Confidence            45789999997543 368999999999999999999999999999999999999    555689999999987543211 


Q ss_pred             ----cceecccccccCccccc
Q psy11820         80 ----CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ----~~~~~~~~~~~~pe~~~   96 (98)
                          .....+++.|+|||++.
T Consensus       492 ~~~~~~~~~~~~~y~APE~~~  512 (613)
T 2ozo_A          492 YYTARSAGKWPLKWYAPECIN  512 (613)
T ss_dssp             ----------CCTTSCHHHHH
T ss_pred             eeeeccCCCCccceeCHhhhc
Confidence                11223457899999875

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.74  E-value=8.2e-18  Score=98.47  Aligned_cols=92  Identities=25%  Similarity=0.274  Sum_probs=73.5

Q ss_pred             cchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-
Q psy11820          2 LEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-   78 (98)
Q Consensus         2 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-   78 (98)
                      .+++|.+++...  ....+++..+..++.|++.|+.|||+.+++|+|+++.||++    ...+.+++.|||.+...... 
T Consensus       113 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~----~~~~~~kl~dfg~~~~~~~~~  188 (317)
T 2buj_A          113 KRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL----GDEGQPVLMDLGSMNQACIHV  188 (317)
T ss_dssp             TTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTSCEEECCCSSCEESCEEE
T ss_pred             CCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE----cCCCCEEEEecCcchhccccc
Confidence            467999988752  23468999999999999999999999999999999999999    66678999999987654211 


Q ss_pred             ----------ccceecccccccCcccccC
Q psy11820         79 ----------VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ----------~~~~~~~~~~~~~pe~~~~   97 (98)
                                ......+++.|+|||++.+
T Consensus       189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  217 (317)
T 2buj_A          189 EGSRQALTLQDWAAQRCTISYRAPELFSV  217 (317)
T ss_dssp             ESHHHHHHHHHHHHHHSCGGGCCGGGSSC
T ss_pred             ccccccccccccccccCCcccCCHhHhcc
Confidence                      0112345888999998753

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.74  E-value=8.1e-18  Score=98.39  Aligned_cols=92  Identities=21%  Similarity=0.245  Sum_probs=69.2

Q ss_pred             cchhHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc
Q psy11820          2 LEQNLYDFLKQN----KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK   77 (98)
Q Consensus         2 ~~~~L~~~~~~~----~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~   77 (98)
                      .+++|.+++...    ....+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++.....
T Consensus       124 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli----~~~~~~kl~Dfg~~~~~~~  199 (313)
T 3brb_A          124 KYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCML----RDDMTVCVADFGLSKKIYS  199 (313)
T ss_dssp             TTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEE----CTTSCEEECSCSCC-----
T ss_pred             cCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE----cCCCcEEEeecCcceeccc
Confidence            467999998532    23468999999999999999999999999999999999999    6667899999999876532


Q ss_pred             c----ccceecccccccCcccccC
Q psy11820         78 A----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 ~----~~~~~~~~~~~~~pe~~~~   97 (98)
                      .    ......+++.|+|||.+.+
T Consensus       200 ~~~~~~~~~~~~~~~y~aPE~~~~  223 (313)
T 3brb_A          200 GDYYRQGRIAKMPVKWIAIESLAD  223 (313)
T ss_dssp             -----------CCGGGSCHHHHHS
T ss_pred             ccccCcccccCCCccccCchhhcC
Confidence            2    1122345678999998754

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.74  E-value=8.9e-19  Score=103.19  Aligned_cols=91  Identities=23%  Similarity=0.272  Sum_probs=72.4

Q ss_pred             cchhHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeee
Q psy11820          2 LEQNLYDFLKQNK------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF   69 (98)
Q Consensus         2 ~~~~L~~~~~~~~------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~   69 (98)
                      .+++|.+++....            ...++...+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|+||
T Consensus       133 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~----~~~~~~kl~Df  208 (333)
T 2i1m_A          133 CYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL----TNGHVAKIGDF  208 (333)
T ss_dssp             TTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEE----EGGGEEEBCCC
T ss_pred             CCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEE----CCCCeEEECcc
Confidence            4679999887531            2357899999999999999999999999999999999999    55668999999


Q ss_pred             cCceeecccc----cceecccccccCccccc
Q psy11820         70 GSASHVSKAV----CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        70 g~~~~~~~~~----~~~~~~~~~~~~pe~~~   96 (98)
                      |++.......    .....+++.|+|||++.
T Consensus       209 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  239 (333)
T 2i1m_A          209 GLARDIMNDSNYIVKGNARLPVKWMAPESIF  239 (333)
T ss_dssp             GGGCCGGGCTTSEECSSCEECGGGSCHHHHH
T ss_pred             ccccccccccceeecCCCCCCccccCHHHhc
Confidence            9987653221    12334567899999864

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.74  E-value=8.4e-18  Score=99.33  Aligned_cols=91  Identities=21%  Similarity=0.294  Sum_probs=69.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++.......  
T Consensus       129 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~----~~~~~~kl~Dfg~~~~~~~~~~~  203 (333)
T 1mqb_A          129 ENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV----NSNLVCKVSDFGLSRVLEDDPEA  203 (333)
T ss_dssp             TTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECCCCC----------
T ss_pred             CCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEE----CCCCcEEECCCCcchhhcccccc
Confidence            4689999997653 368999999999999999999999999999999999999    666789999999987653221  


Q ss_pred             ---cceecccccccCcccccC
Q psy11820         80 ---CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ---~~~~~~~~~~~~pe~~~~   97 (98)
                         .....+++.|+|||++.+
T Consensus       204 ~~~~~~~~~~~~y~aPE~~~~  224 (333)
T 1mqb_A          204 TYTTSGGKIPIRWTAPEAISY  224 (333)
T ss_dssp             -------CCCGGGSCHHHHHS
T ss_pred             ccccCCCCccccccCchhccc
Confidence               112234667999998754

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.74  E-value=5e-18  Score=98.48  Aligned_cols=89  Identities=26%  Similarity=0.305  Sum_probs=72.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|||+.+++|+|+++.||++    ...+.+++.|||++.......  
T Consensus       100 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  173 (291)
T 1xbb_A          100 ELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL----VTQHYAKISDFGLSKALRADENY  173 (291)
T ss_dssp             TTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----EETTEEEECCCTTCEECCTTCSE
T ss_pred             CCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEE----eCCCcEEEccCCcceeeccCCCc
Confidence            4689999998754  68999999999999999999999999999999999999    455689999999987654321  


Q ss_pred             ---cceecccccccCccccc
Q psy11820         80 ---CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ---~~~~~~~~~~~~pe~~~   96 (98)
                         .....+++.|+|||++.
T Consensus       174 ~~~~~~~~~~~~y~aPE~~~  193 (291)
T 1xbb_A          174 YKAQTHGKWPVKWYAPECIN  193 (291)
T ss_dssp             EEC----CCCGGGCCHHHHH
T ss_pred             ccccccCCCCceeeChHHhc
Confidence               11223457799999874

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.74  E-value=3.1e-18  Score=98.89  Aligned_cols=90  Identities=23%  Similarity=0.290  Sum_probs=71.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++.... ..++...+..++.+++.|+.|+|+.+++|+|+++.||++    ...+.+++.|||.+.......  
T Consensus        95 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  169 (281)
T 3cc6_A           95 PYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILV----ASPECVKLGDFGLSRYIEDEDYY  169 (281)
T ss_dssp             TTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE----EETTEEEECCCCGGGCC------
T ss_pred             CCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEE----CCCCcEEeCccCCCccccccccc
Confidence            4689999997653 358999999999999999999999999999999999999    455689999999887653321  


Q ss_pred             -cceecccccccCccccc
Q psy11820         80 -CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 -~~~~~~~~~~~~pe~~~   96 (98)
                       .....+++.|+|||++.
T Consensus       170 ~~~~~~~~~~y~aPE~~~  187 (281)
T 3cc6_A          170 KASVTRLPIKWMSPESIN  187 (281)
T ss_dssp             ---CCCCCGGGCCHHHHH
T ss_pred             ccccCCCCcceeCchhhc
Confidence             12334567899999874

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.74  E-value=6.7e-18  Score=98.81  Aligned_cols=89  Identities=29%  Similarity=0.465  Sum_probs=70.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|+|+++.||++.    . +.++|.|||++......   
T Consensus       110 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~----~-~~~kL~Dfg~~~~~~~~~~~  182 (313)
T 3cek_A          110 GNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----D-GMLKLIDFGIANQMQPDTTS  182 (313)
T ss_dssp             CSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----T-TEEEECCCSSSCC-------
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE----C-CeEEEeeccccccccCcccc
Confidence            4689999998765  689999999999999999999999999999999999993    2 57999999998765322   


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+++.|+|||++.+
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~  202 (313)
T 3cek_A          183 VVKDSQVGTVNYMPPEAIKD  202 (313)
T ss_dssp             -------CCGGGCCHHHHTT
T ss_pred             ccccCCCCCCCcCCHHHHhh
Confidence             1123467899999998753

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.74  E-value=1.5e-17  Score=97.24  Aligned_cols=91  Identities=29%  Similarity=0.418  Sum_probs=75.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|.+++.... ..+++..+..++.+++.|+.|+|+.+++|+|+++.||++    +..+.++|.|||.+......  .
T Consensus       107 ~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~dfg~~~~~~~~~~~  181 (314)
T 3com_A          107 GAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL----NTEGHAKLADFGVAGQLTDTMAK  181 (314)
T ss_dssp             TTEEHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECBTTBSC
T ss_pred             CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEE----CCCCCEEEeecccchhhhhhccc
Confidence            4679999987432 368999999999999999999999999999999999999    66678999999998765432  2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       182 ~~~~~~~~~y~aPE~~~~  199 (314)
T 3com_A          182 RNTVIGTPFWMAPEVIQE  199 (314)
T ss_dssp             BCCCCSCGGGCCHHHHSS
T ss_pred             cCccCCCCCccChhhcCC
Confidence            234567889999998754

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.74  E-value=9.1e-18  Score=101.22  Aligned_cols=79  Identities=38%  Similarity=0.682  Sum_probs=66.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-ccceecccccccCccc
Q psy11820         16 SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEI   94 (98)
Q Consensus        16 ~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~~~~~~~~~~~pe~   94 (98)
                      ..+++..+..++.|++.|+.|||+.+++|+|+++.||++..   ..+.++|.|||++...... ......+++.|+|||+
T Consensus       136 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~---~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~  212 (394)
T 4e7w_A          136 QTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDP---PSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPEL  212 (394)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET---TTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcC---CCCcEEEeeCCCcccccCCCCCcccccCcCccCHHH
Confidence            36899999999999999999999999999999999999931   4568999999999865332 2345567899999998


Q ss_pred             ccC
Q psy11820         95 ILG   97 (98)
Q Consensus        95 ~~~   97 (98)
                      +.+
T Consensus       213 ~~~  215 (394)
T 4e7w_A          213 IFG  215 (394)
T ss_dssp             HTT
T ss_pred             HcC
Confidence            754

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.74  E-value=1.5e-17  Score=96.88  Aligned_cols=91  Identities=24%  Similarity=0.385  Sum_probs=74.6

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc----
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----   78 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~----   78 (98)
                      .++|.+++.......+++..+..++.|++.|+.|||+++++|+|+++.||++    +..+.+++.|||.+......    
T Consensus        91 ~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~----~~~~~~kl~dfg~~~~~~~~~~~~  166 (305)
T 2wtk_C           91 VCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL----TTGGTLKISALGVAEALHPFAADD  166 (305)
T ss_dssp             SEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCTTCEECCTTCSSC
T ss_pred             cCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE----cCCCcEEeeccccccccCcccccc
Confidence            3457788876655579999999999999999999999999999999999999    66678999999998765321    


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......+++.|+|||++.+
T Consensus       167 ~~~~~~~~~~y~aPE~~~~  185 (305)
T 2wtk_C          167 TCRTSQGSPAFQPPEIANG  185 (305)
T ss_dssp             EECCCCSCGGGCCHHHHTC
T ss_pred             ccccCCCCCCCcChhhccC
Confidence            2234467889999998754

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.74  E-value=5.6e-18  Score=99.61  Aligned_cols=90  Identities=34%  Similarity=0.476  Sum_probs=61.7

Q ss_pred             cchhHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc
Q psy11820          2 LEQNLYDFLKQN-KFSPLPLKYIRPILHQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         2 ~~~~L~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~~--~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~   78 (98)
                      .+|+|.+++... ....+++..+..++.|++.|+.|||+.+  ++|+|+++.||++    ...+.++|.|||++......
T Consensus       116 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~----~~~~~~kl~Dfg~~~~~~~~  191 (337)
T 3ll6_A          116 CKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL----SNQGTIKLCDFGSATTISHY  191 (337)
T ss_dssp             CSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEE----CTTSCEEBCCCTTCBCCSSC
T ss_pred             cCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEE----CCCCCEEEecCccceecccc
Confidence            468899988652 2336999999999999999999999999  9999999999999    66678999999998765321


Q ss_pred             c--------------cceecccccccCcccc
Q psy11820         79 V--------------CNTYLQSRYYRAPEII   95 (98)
Q Consensus        79 ~--------------~~~~~~~~~~~~pe~~   95 (98)
                      .              .....+++.|+|||++
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  222 (337)
T 3ll6_A          192 PDYSWSAQRRALVEEEITRNTTPMYRTPEII  222 (337)
T ss_dssp             C------------------------------
T ss_pred             CcccccccccccchhhccccCCCCcCChhhh
Confidence            1              1134578899999987

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.74  E-value=6.2e-18  Score=96.83  Aligned_cols=90  Identities=20%  Similarity=0.283  Sum_probs=73.3

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      .+++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||.+......   
T Consensus        86 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili----~~~~~~kl~dfg~~~~~~~~~~~  160 (267)
T 3t9t_A           86 EHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV----GENQVIKVSDFGMTRFVLDDQYT  160 (267)
T ss_dssp             TTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE----CGGGCEEECCTTGGGGBCCHHHH
T ss_pred             CCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEE----CCCCCEEEccccccccccccccc
Confidence            4789999998653 358999999999999999999999999999999999999    66678999999988754321   


Q ss_pred             ccceecccccccCccccc
Q psy11820         79 VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~   96 (98)
                      ......+++.|+|||++.
T Consensus       161 ~~~~~~~~~~y~aPE~~~  178 (267)
T 3t9t_A          161 SSTGTKFPVKWASPEVFS  178 (267)
T ss_dssp             STTSTTCCGGGCCHHHHH
T ss_pred             ccccccccccccChhhhc
Confidence            112234566799999875

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.74  E-value=4.5e-18  Score=108.05  Aligned_cols=91  Identities=25%  Similarity=0.258  Sum_probs=72.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      +.+|+|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|+|||++....... 
T Consensus       472 ~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl----~~~~~vkL~DFG~a~~~~~~~~  546 (656)
T 2j0j_A          472 CTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV----SSNDCVKLGDFGLSRYMEDSTY  546 (656)
T ss_dssp             CTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----EETTEEEECCCCCCCSCCC---
T ss_pred             CCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEE----eCCCCEEEEecCCCeecCCCcc
Confidence            35789999998654 358899999999999999999999999999999999999    455689999999987653321 


Q ss_pred             --cceecccccccCccccc
Q psy11820         80 --CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 --~~~~~~~~~~~~pe~~~   96 (98)
                        .....+++.|+|||++.
T Consensus       547 ~~~~~~~~t~~y~aPE~~~  565 (656)
T 2j0j_A          547 YKASKGKLPIKWMAPESIN  565 (656)
T ss_dssp             -------CCGGGCCHHHHH
T ss_pred             eeccCCCCCcceeCHHHhc
Confidence              12234567899999874

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.73  E-value=8.5e-18  Score=98.94  Aligned_cols=90  Identities=23%  Similarity=0.301  Sum_probs=73.4

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++.... ..+++..+..++.+++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++.......  
T Consensus       127 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli----~~~~~~kL~Dfg~~~~~~~~~~~  201 (326)
T 2w1i_A          127 PYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEY  201 (326)
T ss_dssp             TTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----EETTEEEECCCTTCEECCSSCSE
T ss_pred             CCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEE----cCCCcEEEecCcchhhccccccc
Confidence            4789999998764 358999999999999999999999999999999999999    555689999999987654321  


Q ss_pred             ---cceecccccccCccccc
Q psy11820         80 ---CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ---~~~~~~~~~~~~pe~~~   96 (98)
                         .....++..|+|||++.
T Consensus       202 ~~~~~~~~~~~~y~aPE~~~  221 (326)
T 2w1i_A          202 YKVKEPGESPIFWYAPESLT  221 (326)
T ss_dssp             EECSSCCSCCGGGCCHHHHH
T ss_pred             cccccCCCCceeEECchhhc
Confidence               12234566799999865

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.73  E-value=8.2e-18  Score=98.92  Aligned_cols=88  Identities=26%  Similarity=0.497  Sum_probs=71.3

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+++|.+++.     .++...+..++.|++.|+.|||+.+++|+|+++.||++..   ....++|.|||++...... ..
T Consensus       116 ~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~---~~~~~kl~Dfg~a~~~~~~~~~  187 (330)
T 3nsz_A          116 NNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH---EHRKLRLIDWGLAEFYHPGQEY  187 (330)
T ss_dssp             CCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET---TTTEEEECCCTTCEECCTTCCC
T ss_pred             CchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcC---CCCEEEEEeCCCceEcCCCCcc
Confidence            4678888774     3788899999999999999999999999999999999932   2237999999999765432 23


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       188 ~~~~~~~~y~aPE~~~~  204 (330)
T 3nsz_A          188 NVRVASRYFKGPELLVD  204 (330)
T ss_dssp             CSCCSCGGGCCHHHHTT
T ss_pred             ccccccccccChhhhcC
Confidence            44567889999998754

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.73  E-value=7.1e-18  Score=97.69  Aligned_cols=90  Identities=24%  Similarity=0.332  Sum_probs=72.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++.......  
T Consensus        92 ~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~kl~Dfg~~~~~~~~~~~  166 (287)
T 1u59_A           92 GGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL----VNRHYAKISDFGLSKALGADDSY  166 (287)
T ss_dssp             TTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----EETTEEEECCCTTCEECTTCSCE
T ss_pred             CCCCHHHHHHhCC-ccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEE----cCCCCEEECcccceeeeccCcce
Confidence            4689999996542 358999999999999999999999999999999999999    455689999999987654221  


Q ss_pred             ---cceecccccccCccccc
Q psy11820         80 ---CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ---~~~~~~~~~~~~pe~~~   96 (98)
                         .....+++.|+|||++.
T Consensus       167 ~~~~~~~~~~~~y~aPE~~~  186 (287)
T 1u59_A          167 YTARSAGKWPLKWYAPECIN  186 (287)
T ss_dssp             ECCCCSSCCCGGGCCHHHHH
T ss_pred             eeccccccccccccCHHHhc
Confidence               12233567899999875

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.73  E-value=7.1e-18  Score=97.58  Aligned_cols=89  Identities=30%  Similarity=0.431  Sum_probs=64.7

Q ss_pred             chhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc
Q psy11820          3 EQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV   79 (98)
Q Consensus         3 ~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~-~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~   79 (98)
                      +++|.+++...  ....+++..+..++.|++.|+.|+|++ +++|+|+++.||++    +..+.++|.|||++.......
T Consensus        89 ~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~  164 (290)
T 3fme_A           89 DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI----NALGQVKMCDFGISGYLVDDV  164 (290)
T ss_dssp             SEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEE----CTTCCEEBCCC----------
T ss_pred             ccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE----CCCCCEEEeecCCcccccccc
Confidence            46777776531  234699999999999999999999998 99999999999999    666789999999987654322


Q ss_pred             -cceecccccccCcccc
Q psy11820         80 -CNTYLQSRYYRAPEII   95 (98)
Q Consensus        80 -~~~~~~~~~~~~pe~~   95 (98)
                       .....+++.|+|||++
T Consensus       165 ~~~~~~~t~~y~aPE~~  181 (290)
T 3fme_A          165 AKDIDAGCKPYMAPERI  181 (290)
T ss_dssp             -----CCCCCCSCHHHH
T ss_pred             cccccCCCccccChhhc
Confidence             2334688899999986

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.73  E-value=1.9e-17  Score=96.77  Aligned_cols=92  Identities=23%  Similarity=0.357  Sum_probs=66.1

Q ss_pred             cchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-
Q psy11820          2 LEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-   78 (98)
Q Consensus         2 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-   78 (98)
                      .+++|.+++...  ....++...+..++.+++.|+.|+|+.+++|+|+++.||++    +..+.++|.|||++...... 
T Consensus       115 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~----~~~~~~kl~Dfg~~~~~~~~~  190 (310)
T 2wqm_A          115 DAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI----TATGVVKLGDLGLGRFFSSKT  190 (310)
T ss_dssp             CSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECCC----------
T ss_pred             CCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEE----cCCCCEEEEeccceeeecCCC
Confidence            467999988642  23368999999999999999999999999999999999999    66678999999988755332 


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+++.|+|||++.+
T Consensus       191 ~~~~~~~~~~~y~aPE~~~~  210 (310)
T 2wqm_A          191 TAAHSLVGTPYYMSPERIHE  210 (310)
T ss_dssp             --------CCSSCCHHHHTT
T ss_pred             ccccccCCCeeEeChHHhCC
Confidence             1234467889999998754

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.72  E-value=1.2e-17  Score=99.93  Aligned_cols=86  Identities=31%  Similarity=0.607  Sum_probs=68.1

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccce
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT   82 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~   82 (98)
                      +++|.+++.    ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||++...... ...
T Consensus       130 ~~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll----~~~~~~kL~Dfg~a~~~~~~-~~~  200 (371)
T 4exu_A          130 QTDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV----NEDCELKILDFGLARHADAE-MTG  200 (371)
T ss_dssp             CEEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECSTTCC---------C
T ss_pred             cccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEE----CCCCCEEEEecCcccccccC-cCC
Confidence            467777763    248999999999999999999999999999999999999    66678999999998765332 234


Q ss_pred             ecccccccCcccccC
Q psy11820         83 YLQSRYYRAPEIILG   97 (98)
Q Consensus        83 ~~~~~~~~~pe~~~~   97 (98)
                      ..+++.|+|||++.+
T Consensus       201 ~~~t~~y~aPE~~~~  215 (371)
T 4exu_A          201 YVVTRWYRAPEVILS  215 (371)
T ss_dssp             TTCCCTTSCHHHHSC
T ss_pred             cccCccccCHHHhcC
Confidence            567899999998764

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.72  E-value=8.1e-18  Score=99.02  Aligned_cols=91  Identities=23%  Similarity=0.297  Sum_probs=74.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++.... ..+++..+..++.|++.|+.|||+.+++|+|+++.||++    +..+.++|.|||.+.......  
T Consensus       109 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~----~~~~~~kl~Dfg~~~~~~~~~~~  183 (327)
T 3lxl_A          109 PSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV----ESEAHVKIADFGLAKLLPLDKDY  183 (327)
T ss_dssp             TTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----EETTEEEECCGGGCEECCTTCSE
T ss_pred             CCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEE----CCCCCEEEcccccceecccCCcc
Confidence            4789999997643 258999999999999999999999999999999999999    556689999999987654321  


Q ss_pred             ---cceecccccccCcccccC
Q psy11820         80 ---CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ---~~~~~~~~~~~~pe~~~~   97 (98)
                         .....+++.|+|||++.+
T Consensus       184 ~~~~~~~~~~~~y~aPE~~~~  204 (327)
T 3lxl_A          184 YVVREPGQSPIFWYAPESLSD  204 (327)
T ss_dssp             EECSSCCCSCGGGSCHHHHHH
T ss_pred             ceeeccCCccccccCHHHhcc
Confidence               123346777999998753

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.72  E-value=7.7e-18  Score=102.61  Aligned_cols=96  Identities=26%  Similarity=0.401  Sum_probs=66.8

Q ss_pred             cchhHHHHHhhCCCCC-----CCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCC---------CCCccEEEe
Q psy11820          2 LEQNLYDFLKQNKFSP-----LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV---------RQPYRVKVI   67 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~-----l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~---------~~~~~~~l~   67 (98)
                      ++++|.+++.......     .++..+..++.|++.|+.|||+.+++|+|+++.||++....         .....++|+
T Consensus        91 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~  170 (434)
T 2rio_A           91 CNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS  170 (434)
T ss_dssp             CSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred             CCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence            4679999997653211     12334577899999999999999999999999999995421         234579999


Q ss_pred             eecCceeecccc------cceecccccccCcccccC
Q psy11820         68 DFGSASHVSKAV------CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        68 ~~g~~~~~~~~~------~~~~~~~~~~~~pe~~~~   97 (98)
                      |||++.......      .....+++.|+|||++.+
T Consensus       171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  206 (434)
T 2rio_A          171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEE  206 (434)
T ss_dssp             CCTTCEECCC--------------CCTTSCHHHHSC
T ss_pred             ccccceecCCCCccceeeecCCCCCCCccCHHHhcc
Confidence            999998654321      123468999999998854

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.72  E-value=4.5e-18  Score=108.30  Aligned_cols=86  Identities=35%  Similarity=0.481  Sum_probs=68.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+++|.+++..    .+++..+..++.|++.|+.|+|+++++|+||++.||++    +. ..++|+|||++......  
T Consensus       166 ~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll----~~-~~~kl~DFG~a~~~~~~--  234 (681)
T 2pzi_A          166 VGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML----TE-EQLKLIDLGAVSRINSF--  234 (681)
T ss_dssp             CCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CS-SCEEECCCTTCEETTCC--
T ss_pred             CCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEE----eC-CcEEEEecccchhcccC--
Confidence            346788877643    58999999999999999999999999999999999999    33 27899999998765432  


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+|+.|+|||++.+
T Consensus       235 ~~~~gt~~y~aPE~~~~  251 (681)
T 2pzi_A          235 GYLYGTPGFQAPEIVRT  251 (681)
T ss_dssp             SCCCCCTTTSCTTHHHH
T ss_pred             CccCCCccccCHHHHcC
Confidence            34568899999998753

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.72  E-value=1.7e-17  Score=97.11  Aligned_cols=91  Identities=26%  Similarity=0.322  Sum_probs=67.1

Q ss_pred             cchhHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHH---cCCcccCCCCCcEEEecCCCCCc-cEEEeeecCceeec
Q psy11820          2 LEQNLYDFLKQNKF-SPLPLKYIRPILHQVLTALLKLKQ---LGLIHADLKPENIMLVDPVRQPY-RVKVIDFGSASHVS   76 (98)
Q Consensus         2 ~~~~L~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~---~~~~h~~l~~~~~~~~~~~~~~~-~~~l~~~g~~~~~~   76 (98)
                      .+++|.+++..... ..++...+..++.|++.|+.|||+   ++++|+|+++.||++    ...+ .+++.|||++....
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll----~~~~~~~kl~Dfg~~~~~~  157 (307)
T 2eva_A           82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL----VAGGTVLKICDFGTACDIQ  157 (307)
T ss_dssp             TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEE----ETTTTEEEECCCCC-----
T ss_pred             CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEE----eCCCCEEEEcccccccccc
Confidence            57899999986542 236788899999999999999999   899999999999999    3334 47999999987543


Q ss_pred             ccccceecccccccCcccccC
Q psy11820         77 KAVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        77 ~~~~~~~~~~~~~~~pe~~~~   97 (98)
                      .. .....+++.|+|||++.+
T Consensus       158 ~~-~~~~~gt~~y~aPE~~~~  177 (307)
T 2eva_A          158 TH-MTNNKGSAAWMAPEVFEG  177 (307)
T ss_dssp             --------CCTTSSCHHHHTC
T ss_pred             cc-cccCCCCCceEChhhhCC
Confidence            32 123457899999998764

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.72  E-value=1.6e-17  Score=96.53  Aligned_cols=91  Identities=31%  Similarity=0.454  Sum_probs=70.8

Q ss_pred             cchhHHHHHhhC------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820          2 LEQNLYDFLKQN------KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus         2 ~~~~L~~~~~~~------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      .+++|.+++...      ....+++..+..++.|++.|+.|+|+.+++|+|+++.||++    +..+.++|.|||.+...
T Consensus        96 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~dfg~~~~~  171 (303)
T 2vwi_A           96 SGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL----GEDGSVQIADFGVSAFL  171 (303)
T ss_dssp             TTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE----CTTCCEEECCCHHHHHC
T ss_pred             cCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEE----cCCCCEEEEeccchhee
Confidence            478999988641      23358999999999999999999999999999999999999    66678999999987644


Q ss_pred             ccc-------ccceecccccccCccccc
Q psy11820         76 SKA-------VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        76 ~~~-------~~~~~~~~~~~~~pe~~~   96 (98)
                      ...       ......+++.|+|||++.
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (303)
T 2vwi_A          172 ATGGDITRNKVRKTFVGTPCWMAPEVME  199 (303)
T ss_dssp             C---------------CCCTTCCHHHHH
T ss_pred             ccCCCccchhhhcccCCCccccCHHHhc
Confidence            211       123346788999999864

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.72  E-value=2.7e-17  Score=95.30  Aligned_cols=92  Identities=24%  Similarity=0.297  Sum_probs=73.0

Q ss_pred             cchhHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          2 LEQNLYDFLKQNK-FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      .+++|.+++.... ...+++..+..++.|++.|+.|+|+.+++|+|+++.||++..   ..+.++|.|||.+......  
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~---~~~~~kl~Dfg~~~~~~~~~~  178 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT---YSGVLKISDFGTSKRLAGINP  178 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET---TTCCEEECCTTTCEESCC---
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC---CCCCEEEeecccccccCCCCC
Confidence            4789999998653 224678888999999999999999999999999999999932   1568999999998765422  


Q ss_pred             ccceecccccccCccccc
Q psy11820         79 VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~   96 (98)
                      ......+++.|+|||++.
T Consensus       179 ~~~~~~~~~~y~aPE~~~  196 (295)
T 2clq_A          179 CTETFTGTLQYMAPEIID  196 (295)
T ss_dssp             --CCCCCCGGGCCHHHHH
T ss_pred             cccccCCCccccChhhhc
Confidence            223456788999999874

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.72  E-value=2.3e-17  Score=96.54  Aligned_cols=90  Identities=26%  Similarity=0.317  Sum_probs=70.2

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc----
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK----   77 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~----   77 (98)
                      .+++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|+|+++.||++    + .+.+++.|||++.....    
T Consensus       112 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~----~-~~~~~l~Dfg~~~~~~~~~~~  185 (319)
T 2y4i_B          112 KGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY----D-NGKVVITDFGLFSISGVLQAG  185 (319)
T ss_dssp             CSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEE----C---CCEECCCSCCC--------
T ss_pred             cCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEE----e-CCCEEEeecCCcccccccccc
Confidence            4789999997643 358899999999999999999999999999999999999    3 35789999998765321    


Q ss_pred             ---cccceecccccccCcccccC
Q psy11820         78 ---AVCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        78 ---~~~~~~~~~~~~~~pe~~~~   97 (98)
                         .......+++.|+|||++.+
T Consensus       186 ~~~~~~~~~~g~~~y~aPE~~~~  208 (319)
T 2y4i_B          186 RREDKLRIQNGWLCHLAPEIIRQ  208 (319)
T ss_dssp             --CCSCBCCSGGGGTSCHHHHSC
T ss_pred             ccccccccCCCcccccChHHhhh
Confidence               11223457889999998753

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.72  E-value=1.7e-17  Score=96.05  Aligned_cols=93  Identities=28%  Similarity=0.516  Sum_probs=74.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+++|.+++....  .+++..+..++.+++.|+.|||+.+++|+|+++.||++... .....+++.|||++...... ..
T Consensus       104 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~-~~~~~~kL~Dfg~~~~~~~~~~~  180 (287)
T 2wei_A          104 TGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK-EKDCDIKIIDFGLSTCFQQNTKM  180 (287)
T ss_dssp             CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCS-STTCCEEECSTTGGGTBCCCSSC
T ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecC-CCcccEEEeccCcceeecCCCcc
Confidence            4789988887654  68999999999999999999999999999999999999432 12346999999988754332 22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|+|||++.+
T Consensus       181 ~~~~~~~~y~aPE~~~~  197 (287)
T 2wei_A          181 KDRIGTAYYIAPEVLRG  197 (287)
T ss_dssp             SCHHHHHTTCCHHHHTT
T ss_pred             ccccCcccccChHHhcC
Confidence            34457888999998764

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.72  E-value=1.1e-17  Score=98.37  Aligned_cols=94  Identities=21%  Similarity=0.306  Sum_probs=72.9

Q ss_pred             cchhHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec
Q psy11820          2 LEQNLYDFLKQNKF-----SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS   76 (98)
Q Consensus         2 ~~~~L~~~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~   76 (98)
                      .+++|.+++.....     ..++...+..++.+++.|+.|||+.+++|+|+++.||++... .....++|.|||++....
T Consensus       116 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~-~~~~~~kl~Dfg~~~~~~  194 (327)
T 2yfx_A          116 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIY  194 (327)
T ss_dssp             TTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCS-STTCCEEECCCHHHHHHH
T ss_pred             CCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecC-CCcceEEECccccccccc
Confidence            47899999986532     348889999999999999999999999999999999999432 134469999999886432


Q ss_pred             cc----ccceecccccccCccccc
Q psy11820         77 KA----VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        77 ~~----~~~~~~~~~~~~~pe~~~   96 (98)
                      ..    ......+++.|+|||++.
T Consensus       195 ~~~~~~~~~~~~~~~~y~aPE~~~  218 (327)
T 2yfx_A          195 RASYYRKGGCAMLPVKWMPPEAFM  218 (327)
T ss_dssp             C------CCGGGSCGGGCCHHHHH
T ss_pred             cccccccCCCcCCCcceeCHhHhc
Confidence            21    122345678899999864

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.72  E-value=8.3e-18  Score=97.32  Aligned_cols=90  Identities=23%  Similarity=0.234  Sum_probs=71.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--   79 (98)
                      .+++|.+++.... ..+++..+..++.+++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||++.......  
T Consensus       103 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili----~~~~~~kl~Dfg~~~~~~~~~~~  177 (291)
T 1u46_A          103 PLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL----ATRDLVKIGDFGLMRALPQNDDH  177 (291)
T ss_dssp             TTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----EETTEEEECCCTTCEECCC-CCE
T ss_pred             cCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEE----cCCCCEEEccccccccccccccc
Confidence            4689999987642 358899999999999999999999999999999999999    455689999999987653321  


Q ss_pred             ---cceecccccccCccccc
Q psy11820         80 ---CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ---~~~~~~~~~~~~pe~~~   96 (98)
                         .....+++.|+|||++.
T Consensus       178 ~~~~~~~~~~~~y~aPE~~~  197 (291)
T 1u46_A          178 YVMQEHRKVPFAWCAPESLK  197 (291)
T ss_dssp             EEC-----CCGGGCCHHHHH
T ss_pred             hhhhccCCCCceeeCchhhc
Confidence               12334566899999875

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.71  E-value=2.5e-18  Score=107.24  Aligned_cols=80  Identities=20%  Similarity=0.214  Sum_probs=66.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      +.+++|.+++..          +..++.|++.|+.|+|+++++|+|++|.||++    +.  .++|.|||++....... 
T Consensus       421 ~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl----~~--~~kL~DFGla~~~~~~~~  484 (540)
T 3en9_A          421 INGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF----DK--DLYIIDFGLGKISNLDED  484 (540)
T ss_dssp             CCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEE----SS--SEEECCCTTCEECCCHHH
T ss_pred             CCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEE----CC--eEEEEECccCEECCCccc
Confidence            347899998864          45788999999999999999999999999999    44  89999999998764321 


Q ss_pred             --------cceecccccccCccccc
Q psy11820         80 --------CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 --------~~~~~~~~~~~~pe~~~   96 (98)
                              .....+|+.|+|||++.
T Consensus       485 ~~~~~~~~~~~~~GT~~y~APEv~~  509 (540)
T 3en9_A          485 KAVDLIVFKKAVLSTHHEKFDEIWE  509 (540)
T ss_dssp             HHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred             cccchhhhhhhhcCCCCcCCHHHHH
Confidence                    13567899999999875

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.71  E-value=5.2e-17  Score=96.48  Aligned_cols=92  Identities=32%  Similarity=0.542  Sum_probs=70.5

Q ss_pred             chhHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHH--HcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc
Q psy11820          3 EQNLYDFLKQ--NKFSPLPLKYIRPILHQVLTALLKLK--QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         3 ~~~L~~~~~~--~~~~~l~~~~~~~~~~~i~~~l~~lh--~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~   78 (98)
                      .++|.+.+..  .....++...+..++.+++.|+.|+|  +.+++|+|+++.||++..   ..+.++|+|||++......
T Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~---~~~~~kl~Dfg~a~~~~~~  185 (360)
T 3e3p_A          109 PDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNE---ADGTLKLCDFGSAKKLSPS  185 (360)
T ss_dssp             SCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEET---TTTEEEECCCTTCBCCCTT
T ss_pred             cccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeC---CCCcEEEeeCCCceecCCC
Confidence            3455544432  12346889999999999999999999  999999999999999932   2568999999999765432


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+++.|+|||++.+
T Consensus       186 ~~~~~~~gt~~y~aPE~~~~  205 (360)
T 3e3p_A          186 EPNVAYICSRYYRAPELIFG  205 (360)
T ss_dssp             SCCCSTTSCGGGCCHHHHTT
T ss_pred             CCcccccCCcceeCHHHHcC
Confidence             2234567889999998754

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.70  E-value=1.3e-17  Score=96.94  Aligned_cols=89  Identities=24%  Similarity=0.378  Sum_probs=70.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--AV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~   79 (98)
                      .+++|.+++.... ..+++..+..++.+++.|+.|+|+.+++|+|+++.||++    +..+.+++.|||++.....  ..
T Consensus        99 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  173 (302)
T 2j7t_A           99 PGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM----TLEGDIRLADFGVSAKNLKTLQK  173 (302)
T ss_dssp             TTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE----CTTSCEEECCCHHHHHHHHHHHC
T ss_pred             CCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE----CCCCCEEEEECCCCccccccccc
Confidence            5788999887542 358999999999999999999999999999999999999    6667899999998754321  12


Q ss_pred             cceecccccccCcccc
Q psy11820         80 CNTYLQSRYYRAPEII   95 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~   95 (98)
                      .....+++.|+|||++
T Consensus       174 ~~~~~~~~~y~aPE~~  189 (302)
T 2j7t_A          174 RDSFIGTPYWMAPEVV  189 (302)
T ss_dssp             -----CCGGGCCHHHH
T ss_pred             cccccCChhhcCCeee
Confidence            2345678899999987

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.70  E-value=5.7e-17  Score=94.74  Aligned_cols=89  Identities=29%  Similarity=0.494  Sum_probs=70.4

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc----
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----   78 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~----   78 (98)
                      +++|.+++...   .+++..+..++.|++.|+.|||+.+++|+|+++.||++..   ....++|.|||++......    
T Consensus       105 ~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~---~~~~~kl~Dfg~~~~~~~~~~~~  178 (320)
T 2i6l_A          105 ETDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT---EDLVLKIGDFGLARIMDPHYSHK  178 (320)
T ss_dssp             SEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET---TTTEEEECCCTTCBCC-------
T ss_pred             CCCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC---CCCeEEEccCccccccCCCcccc
Confidence            46899998643   5899999999999999999999999999999999999932   3457999999998764321    


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+++.|+|||++.+
T Consensus       179 ~~~~~~~~~~~y~aPE~~~~  198 (320)
T 2i6l_A          179 GHLSEGLVTKWYRSPRLLLS  198 (320)
T ss_dssp             -CCCGGGSCCTTCCHHHHHC
T ss_pred             cccccccccccccCcHHhcC
Confidence             1223456788999998753

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.70  E-value=8.8e-18  Score=99.30  Aligned_cols=78  Identities=31%  Similarity=0.540  Sum_probs=59.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc------ccceecccccccC
Q psy11820         18 LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA------VCNTYLQSRYYRA   91 (98)
Q Consensus        18 l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~------~~~~~~~~~~~~~   91 (98)
                      +++..+..++.|++.|+.|||+.+++|+|+++.||++..  +....++|.|||++......      ......+++.|+|
T Consensus       165 ~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~--~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~a  242 (345)
T 3hko_A          165 QREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFST--NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVA  242 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESC--SSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEec--CCCceEEEeeccccccccccCccccccccccCCCccccC
Confidence            356778889999999999999999999999999999932  12237999999998765321      1234568899999


Q ss_pred             cccccC
Q psy11820         92 PEIILG   97 (98)
Q Consensus        92 pe~~~~   97 (98)
                      ||++.+
T Consensus       243 PE~~~~  248 (345)
T 3hko_A          243 PEVLNT  248 (345)
T ss_dssp             HHHHTC
T ss_pred             chhhcc
Confidence            998753

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.69  E-value=7.4e-18  Score=97.11  Aligned_cols=92  Identities=25%  Similarity=0.408  Sum_probs=72.6

Q ss_pred             cchhHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcC-----CcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820          2 LEQNLYDFLKQNK--FSPLPLKYIRPILHQVLTALLKLKQLG-----LIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus         2 ~~~~L~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~-----~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .+++|.+++....  ...+++..+..++.|++.|+.|+|+.+     ++|+|+++.||++    +..+.++|.|||.+..
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~----~~~~~~kl~dfg~~~~  165 (279)
T 2w5a_A           90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL----DGKQNVKLGDFGLARI  165 (279)
T ss_dssp             TTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEE----CSSSCEEECCCCHHHH
T ss_pred             CCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEE----cCCCCEEEecCchhee
Confidence            4679999987532  234899999999999999999999999     9999999999999    6667899999998865


Q ss_pred             eccc--ccceecccccccCcccccC
Q psy11820         75 VSKA--VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        75 ~~~~--~~~~~~~~~~~~~pe~~~~   97 (98)
                      ....  ......+++.|+|||++.+
T Consensus       166 ~~~~~~~~~~~~~~~~y~aPE~~~~  190 (279)
T 2w5a_A          166 LNHDTSFAKTFVGTPYYMSPEQMNR  190 (279)
T ss_dssp             C---CHHHHHHHSCCTTCCHHHHHC
T ss_pred             eccccccccccCCCccccChHHhcc
Confidence            4322  1233467889999998754

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.69  E-value=2.2e-17  Score=98.05  Aligned_cols=86  Identities=31%  Similarity=0.604  Sum_probs=66.7

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccce
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT   82 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~   82 (98)
                      +++|.+++.    ..+++..+..++.|++.|+.|||+++++|+|+++.||++    +..+.++|.|||++...... ...
T Consensus       112 ~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~----~~~~~~kl~Dfg~~~~~~~~-~~~  182 (353)
T 3coi_A          112 QTDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV----NEDCELKILDFGLARHADAE-MTG  182 (353)
T ss_dssp             SEEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE----CTTCCEEECSTTCTTC--------
T ss_pred             cCCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeE----CCCCcEEEeecccccCCCCC-ccc
Confidence            345555553    248899999999999999999999999999999999999    66678999999998754332 234


Q ss_pred             ecccccccCcccccC
Q psy11820         83 YLQSRYYRAPEIILG   97 (98)
Q Consensus        83 ~~~~~~~~~pe~~~~   97 (98)
                      ..+++.|+|||++.+
T Consensus       183 ~~~t~~y~aPE~~~~  197 (353)
T 3coi_A          183 YVVTRWYRAPEVILS  197 (353)
T ss_dssp             -CCSBCCSCHHHHSC
T ss_pred             cccCcCcCCHHHHhC
Confidence            467889999998754

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.69  E-value=1.2e-16  Score=101.71  Aligned_cols=95  Identities=33%  Similarity=0.481  Sum_probs=76.3

Q ss_pred             cchhHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          2 LEQNLYDFLKQNK-FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      .+++|.+++.... ...+++..+..++.+++.|+.|+|+.+++|+|+++.||++... .....+++.|||.+...... .
T Consensus       101 ~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~-g~~~~vKL~DFG~a~~~~~~~~  179 (676)
T 3qa8_A          101 EGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPG-PQRLIHKIIDLGYAKELDQGEL  179 (676)
T ss_dssp             SSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECC-SSSCEEEECSCCCCCBTTSCCC
T ss_pred             CCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecC-CCceeEEEcccccccccccccc
Confidence            5789999998643 2358889999999999999999999999999999999999543 22345899999998765432 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       180 ~~~~~gt~~Y~APE~l~~  197 (676)
T 3qa8_A          180 CTEFVGTLQYLAPELLEQ  197 (676)
T ss_dssp             CCCCCSCCTTCSSCSSCC
T ss_pred             cccccCCcccCChHHhcc
Confidence            344568899999998764

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.67  E-value=1.3e-16  Score=93.82  Aligned_cols=89  Identities=29%  Similarity=0.414  Sum_probs=57.5

Q ss_pred             chhHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc
Q psy11820          3 EQNLYDFLKQ---NKFSPLPLKYIRPILHQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         3 ~~~L~~~~~~---~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~   78 (98)
                      .++|.+++..   .....+++..+..++.+++.|+.|+|+. +++|+|+++.||++    +..+.++|.|||++......
T Consensus       104 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll----~~~~~~kl~Dfg~~~~~~~~  179 (327)
T 3aln_A          104 STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILL----DRSGNIKLCDFGISGQLVDS  179 (327)
T ss_dssp             SEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEE----ETTTEEEECCCSSSCC----
T ss_pred             CCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEE----cCCCCEEEccCCCceecccc
Confidence            4567776652   2234689999999999999999999998 99999999999999    55668999999998765432


Q ss_pred             c-cceecccccccCcccc
Q psy11820         79 V-CNTYLQSRYYRAPEII   95 (98)
Q Consensus        79 ~-~~~~~~~~~~~~pe~~   95 (98)
                      . .....+++.|+|||++
T Consensus       180 ~~~~~~~gt~~y~aPE~~  197 (327)
T 3aln_A          180 IAKTRDAGCRPYMAPERI  197 (327)
T ss_dssp             ------------------
T ss_pred             cccccCCCCccccCceee
Confidence            2 2233678899999987

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.63  E-value=3.8e-16  Score=91.31  Aligned_cols=89  Identities=28%  Similarity=0.421  Sum_probs=63.8

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      ++.+..+.... ...+++..+..++.+++.|+.|+|+. +++|+|+++.||++    +..+.++|.|||++...... ..
T Consensus       107 ~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~----~~~~~~kl~dfg~~~~~~~~~~~  181 (318)
T 2dyl_A          107 GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL----DERGQIKLCDFGISGRLVDDKAK  181 (318)
T ss_dssp             SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEE----CTTSCEEECCCTTC---------
T ss_pred             CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEE----CCCCCEEEEECCCchhccCCccc
Confidence            34455554432 23689999999999999999999995 99999999999999    66678999999988655332 22


Q ss_pred             ceecccccccCccccc
Q psy11820         81 NTYLQSRYYRAPEIIL   96 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~   96 (98)
                      ....+++.|+|||++.
T Consensus       182 ~~~~~~~~y~aPE~~~  197 (318)
T 2dyl_A          182 DRSAGCAAYMAPERID  197 (318)
T ss_dssp             -----CCTTCCHHHHC
T ss_pred             cccCCCccccChhhcc
Confidence            3446788999999974

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.61  E-value=3e-15  Score=87.21  Aligned_cols=74  Identities=22%  Similarity=0.353  Sum_probs=63.5

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS   76 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~   76 (98)
                      .+++|.+++.......+++..+..++.|++.|+.|||+.+++|+|+++.||++... ...+.+++.|||++....
T Consensus        98 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~-~~~~~~kl~Dfg~a~~~~  171 (299)
T 3m2w_A           98 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETT  171 (299)
T ss_dssp             CSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS-STTCCEEECCCTTCEECT
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecC-CCCCcEEEeccccccccc
Confidence            47899999988765579999999999999999999999999999999999999432 115689999999987653

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.44  E-value=3.5e-14  Score=82.53  Aligned_cols=49  Identities=24%  Similarity=0.438  Sum_probs=43.8

Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820         22 YIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus        22 ~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      .+..++.|++.|+.|+|+.+++|+|++|.||++    + .+.++|+|||++...
T Consensus       194 ~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl----~-~~~vkl~DFG~a~~~  242 (282)
T 1zar_A          194 NPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV----S-EEGIWIIDFPQSVEV  242 (282)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE----E-TTEEEECCCTTCEET
T ss_pred             hHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEE----E-CCcEEEEECCCCeEC
Confidence            456789999999999999999999999999999    4 568999999998754

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.31  E-value=6.4e-12  Score=73.01  Aligned_cols=63  Identities=8%  Similarity=-0.031  Sum_probs=52.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecC
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS   71 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~   71 (98)
                      +.+++|.+++...    .....+..++.|++.|+.|+|+++++|+|+++.||++    ...+.+++.+++.
T Consensus       113 ~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll----~~~g~~kl~~~~~  175 (286)
T 3uqc_A          113 IRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRV----SIDGDVVLAYPAT  175 (286)
T ss_dssp             CCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE----ETTSCEEECSCCC
T ss_pred             cCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEE----cCCCCEEEEeccc
Confidence            3578999999532    3556788899999999999999999999999999999    5556788876554

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.22  E-value=1.6e-11  Score=70.42  Aligned_cols=61  Identities=30%  Similarity=0.428  Sum_probs=49.6

Q ss_pred             hHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec
Q psy11820          5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS   76 (98)
Q Consensus         5 ~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh-~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~   76 (98)
                      +|.++...     .++..+..++.|++.++.|+| +.+++|+|++|.||++    ..  .+++.|||++....
T Consensus       159 ~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl----~~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          159 TLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMY----ID--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             BHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEE----SS--SEEECCCTTCEETT
T ss_pred             cHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE----cC--cEEEEECcccccCC
Confidence            56665432     224467888999999999999 9999999999999999    44  79999999997653

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.70  E-value=1.3e-08  Score=61.67  Aligned_cols=55  Identities=20%  Similarity=0.352  Sum_probs=43.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCC------CccEEEeeecCceee
Q psy11820         21 KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ------PYRVKVIDFGSASHV   75 (98)
Q Consensus        21 ~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~------~~~~~l~~~g~~~~~   75 (98)
                      +.+..+..|++.++.++|+.+++|+|+++.||++....+.      ...+.+.||+.+...
T Consensus       205 ~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          205 PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence            3456788999999999999999999999999999543211      113789999877654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.29  E-value=0.00042  Score=39.45  Aligned_cols=31  Identities=29%  Similarity=0.440  Sum_probs=24.1

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ..++|+|+++.|+++    +....+.+.||+.+..
T Consensus       183 ~~l~HgDl~~~Nil~----~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          183 LVFSHGDLGDSNIFV----KDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             EEEECSSCCTTSEEE----ETTEEEEECCCTTCEE
T ss_pred             ceEECCCCCcCcEEE----ECCcEEEEEEchhccc
Confidence            447899999999999    3334567999997754

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.20  E-value=0.0011  Score=39.47  Aligned_cols=32  Identities=22%  Similarity=0.523  Sum_probs=24.0

Q ss_pred             CCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         41 GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        41 ~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .++|+|+++.|+++...  ....+.+.||+.+..
T Consensus       217 ~lvHgD~~~~Nil~~~~--~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          217 SIVHGDYRLDNLMFHPT--EPRVLAVLDWELSTL  248 (359)
T ss_dssp             EEECSSCSGGGEEECSS--SSCEEEECCCTTCEE
T ss_pred             eEEeCCCCCCcEEEeCC--CCcEEEEECcccccc
Confidence            58999999999999321  112468999998764

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.18  E-value=0.0005  Score=38.84  Aligned_cols=30  Identities=27%  Similarity=0.264  Sum_probs=24.0

Q ss_pred             CcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820         42 LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus        42 ~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      ++|+|+++.|+++    +....+.+.||+.+...
T Consensus       186 l~HgDl~~~Nil~----~~~~~~~liD~~~a~~g  215 (264)
T 1nd4_A          186 VTHGDACLPNIMV----ENGRFSGFIDCGRLGVA  215 (264)
T ss_dssp             EECSSCCGGGEEE----ETTEEEEECCCTTCEEE
T ss_pred             EECCCCCCCcEEE----ECCcEEEEEcchhcccC
Confidence            8999999999999    33345679999987543

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=96.03  E-value=0.025  Score=33.19  Aligned_cols=31  Identities=29%  Similarity=0.386  Sum_probs=25.4

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ..++|+|+.+.|+++    .....+.+.||+.+..
T Consensus       222 ~~l~HgD~~~~Nil~----~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          222 PNLCHQDYGTGNTLL----GENEQIWVIDLDTVSF  252 (346)
T ss_dssp             CCEECSSCSTTSEEE----CGGGCEEECCCTTCEE
T ss_pred             CceecCCCCcccEEE----eCCCcEEEEehhhccc
Confidence            578999999999998    4445789999987643

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=95.76  E-value=0.025  Score=32.91  Aligned_cols=32  Identities=31%  Similarity=0.528  Sum_probs=24.4

Q ss_pred             CCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         41 GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        41 ~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .++|+|+.+.|+++...  ....+.+.||+.+..
T Consensus       192 ~~~HgD~~~~N~l~~~~--~~~~~~~iD~~~~~~  223 (304)
T 3sg8_A          192 CLIHNDFSSDHILFDTE--KNTICGIIDFGDAAI  223 (304)
T ss_dssp             EEECSCCCGGGEEEETT--TTEEEEECCCTTCEE
T ss_pred             eeEeCCCCcccEEEeCC--CCCEEEEEeCCCCcc
Confidence            47999999999999431  144678999987754

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=93.64  E-value=0.1  Score=31.91  Aligned_cols=33  Identities=30%  Similarity=0.340  Sum_probs=25.8

Q ss_pred             HHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceee
Q psy11820         38 KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV   75 (98)
Q Consensus        38 h~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~   75 (98)
                      +...++|+|+.+.|+++    .... +.+.||+.+...
T Consensus       230 ~~~~liHGDl~~~Nil~----~~~~-~~lID~e~a~~G  262 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMV----TQDS-TQVIDPEFSFYG  262 (420)
T ss_dssp             BCCEEECSCCSGGGEEE----CSSC-EEECCCTTCEEE
T ss_pred             CCCeEEecCCCCCcEEE----eCCC-CEEEeCcccccC
Confidence            35679999999999999    3333 899999877643

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=93.62  E-value=0.38  Score=28.14  Aligned_cols=35  Identities=37%  Similarity=0.517  Sum_probs=24.5

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ..++|+|+.+.|+++.........+.+.||+.+..
T Consensus       190 ~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          190 PRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             CEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             CeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            35799999999999943111133458999987654

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=92.50  E-value=0.082  Score=30.05  Aligned_cols=29  Identities=21%  Similarity=0.426  Sum_probs=23.5

Q ss_pred             CcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         42 LIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        42 ~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ++|+|+.+.|+++    +....+.+.||+.+..
T Consensus       195 l~HGDl~~~Nil~----~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          195 VTHGDFSLDNLIF----DEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             EECSCCCTTSEEE----ETTEEEEECCCTTCEE
T ss_pred             EEcCCCCCCeEEE----ECCeEEEEEECccccc
Confidence            7899999999999    4445667999987754

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=90.84  E-value=0.092  Score=30.68  Aligned_cols=31  Identities=35%  Similarity=0.490  Sum_probs=23.9

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .+++|+|+.+.|+++.    ....+.+.||+.+..
T Consensus       187 ~~liHgDl~~~Nil~~----~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFL----GDELSGLIDFYFACN  217 (322)
T ss_dssp             EEEECSCCCGGGEEEE----TTEEEEECCCTTCEE
T ss_pred             cccCCCCCCccCEEEe----CCceEEEecchhccC
Confidence            4589999999999993    334457999987654

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=90.00  E-value=0.21  Score=29.39  Aligned_cols=35  Identities=29%  Similarity=0.455  Sum_probs=25.4

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ..++|+|+.+.|+++.........+.+.||+.+..
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            46899999999999933111125789999987754

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=89.29  E-value=0.16  Score=30.17  Aligned_cols=31  Identities=19%  Similarity=0.231  Sum_probs=24.3

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ..++|+|+.+.|+++.    ....+.+.||+.+..
T Consensus       222 ~~l~HgDl~~~Nil~~----~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          222 PVLLWGDARVGNVLYR----DFQPVAVLDWEMVAL  252 (357)
T ss_dssp             CEEECSSCSGGGEEEE----TTEEEEECCGGGCEE
T ss_pred             ceEEeCCCCCCeEEEe----CCcEEEEEccccccc
Confidence            4689999999999994    333578999987754

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=88.70  E-value=0.69  Score=27.05  Aligned_cols=29  Identities=24%  Similarity=0.381  Sum_probs=23.2

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ..++|+|+.+.|+++    ..  .+.+.||+.+..
T Consensus       195 ~~l~HgD~~~~Nil~----~~--~~~lIDfe~a~~  223 (328)
T 1zyl_A          195 VLRLHGDCHAGNILW----RD--GPMFVDLDDARN  223 (328)
T ss_dssp             CEECCSSCSGGGEEE----SS--SEEECCCTTCCE
T ss_pred             eeeeeCCCCcccEeE----cC--CCEEEECCCCCc
Confidence            457899999999999    42  689999976643

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=86.41  E-value=0.82  Score=27.20  Aligned_cols=31  Identities=19%  Similarity=0.386  Sum_probs=24.6

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ..++|+|+.+.|+++    ...+.+.+.||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~----~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLV----GNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEE----CGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEE----eCCCeEEEEECCCCee
Confidence            458999999999999    4345689999986654

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=83.10  E-value=0.81  Score=27.39  Aligned_cols=30  Identities=27%  Similarity=0.472  Sum_probs=23.0

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ..++|+|+.+.|+++    ... .+.+.||..+..
T Consensus       212 ~~l~HgDl~~~Nil~----~~~-~~~lID~e~a~~  241 (369)
T 3c5i_A          212 IVFCHNDLQENNIIN----TNK-CLRLIDFEYSGF  241 (369)
T ss_dssp             EEEECSCCCGGGEEE----CC--CEEECCCTTCEE
T ss_pred             eEEEeCCCCcccEEe----cCC-cEEEEEecCCCC
Confidence            358999999999998    332 378999987653

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=80.25  E-value=1.3  Score=27.10  Aligned_cols=34  Identities=24%  Similarity=0.387  Sum_probs=24.8

Q ss_pred             CCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         41 GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        41 ~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .++|+|+.+.|+++.........+.+.||..+..
T Consensus       221 ~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          221 VFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             EEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             EEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            5899999999999954321235789999987754

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=80.01  E-value=1.1  Score=27.08  Aligned_cols=31  Identities=35%  Similarity=0.320  Sum_probs=23.8

Q ss_pred             HcCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         39 QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        39 ~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ...++|+|+.+.|+++.    .. .+.+.||..+..
T Consensus       226 ~~~L~HGDl~~~Nil~~----~~-~~~lID~e~a~~  256 (397)
T 2olc_A          226 AETLIHGDLHTGSIFAS----EH-ETKVIDPEFAFY  256 (397)
T ss_dssp             CCEEECSCCSGGGEEEC----SS-CEEECCCTTCEE
T ss_pred             CCceeeCCCCcCcEEEe----CC-CeEEEeCccccc
Confidence            35689999999999983    22 478999976653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	98
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-17
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-17
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-16
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	9e-16
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-15
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	6e-15
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-14
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-14
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-14
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	8e-14
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-13
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-13
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	6e-13
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-12
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-12
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	5e-12
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-11
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	4e-11
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-11
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	6e-11
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	7e-11
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	8e-11
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	9e-11
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-10
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-10
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-10
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-10
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-10
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	5e-10
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	7e-10
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	7e-10
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-09
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-09
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	4e-09
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-09
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-09
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	5e-09
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	6e-09
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	9e-09
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-08
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-08
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-08
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-08
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-08
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-08
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-08
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-08
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-08
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-07
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-07
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-07
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-07
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-07
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-07
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-07
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	6e-07
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	6e-07
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-06
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-06
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	8e-06
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-05
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-05
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-05

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 4e-17
 Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            +Y  L+  K S    +     + ++  AL       +IH D+KPEN++L         +
Sbjct: 92  TVYRELQ--KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS----AGEL 145

Query: 65  KVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
           K+ DFG + H   +   T   +  Y  PE+I G 
Sbjct: 146 KIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 179

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 5e-17
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 2/95 (2%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            L+  ++         +    I+  +  A+  L  + + H D+KPEN++     R    +
Sbjct: 95  ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY-TSKRPNAIL 153

Query: 65  KVIDFGSASHV-SKAVCNTYLQSRYYRAPEIILGE 98
           K+ DFG A    S     T   + YY APE++  E
Sbjct: 154 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 188

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.9 bits (168), Expect = 4e-16
 Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 7/99 (7%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVR 59
           M   +L   LK+     +P + +  +   V+  L  L++   ++H D+KP NI++     
Sbjct: 86  MDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV----N 139

Query: 60  QPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
               +K+ DFG +  +  ++ N+++ +R Y +PE + G 
Sbjct: 140 SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.1 bits (166), Expect = 9e-16
 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 6/100 (6%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
                  D +      PL    I+ +  Q L AL  L    +IH DLK  NI+       
Sbjct: 90  FCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL---- 145

Query: 61  PYRVKVIDFGSASHVSKAV--CNTYLQSRYYRAPEIILGE 98
              +K+ DFG ++  ++ +   ++++ + Y+ APE+++ E
Sbjct: 146 DGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCE 185

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.3 bits (164), Expect = 2e-15
 Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 8/98 (8%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
            L           K  PL    I  + H  L  L  L    +IH D+K  NI+L +    
Sbjct: 97  CLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE---- 150

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
           P  VK+ DFGSAS ++ A  N+++ + Y+ APE+IL  
Sbjct: 151 PGLVKLGDFGSASIMAPA--NSFVGTPYWMAPEVILAM 186

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.8 bits (160), Expect = 6e-15
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 7/96 (7%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTAL--LKLKQLGLIHADLKPENIMLVDPVRQPY 62
            L  +LK+ K   + +K +R    Q+L  L  L  +   +IH DLK +NI +  P     
Sbjct: 98  TLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT---G 152

Query: 63  RVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
            VK+ D G A+    +     + +  + APE+   +
Sbjct: 153 SVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEK 188

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.0 bits (158), Expect = 1e-14
 Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           M + +L D+L+    S L    +      V  A+  L+    +H DL   N+++     +
Sbjct: 83  MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV----SE 138

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
               KV DFG     S    +T      + APE +  +
Sbjct: 139 DNVAKVSDFGLTKEASST-QDTGKLPVKWTAPEALREK 175

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (157), Expect = 1e-14
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 5/95 (5%)

Query: 4   QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
           Q+L+DF+ +     L  +  R    QVL A+      G++H D+K ENI++         
Sbjct: 95  QDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGE 149

Query: 64  VKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
           +K+IDFGS + +   V   +  +R Y  PE I   
Sbjct: 150 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 184

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 65.1 bits (158), Expect = 2e-14
 Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 4/95 (4%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            L++ +  ++ + +        + QV   L  + +   +H DLKPENIM     ++   +
Sbjct: 109 ELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT--KRSNEL 165

Query: 65  KVIDFGSASHVS-KAVCNTYLQSRYYRAPEIILGE 98
           K+IDFG  +H+  K        +  + APE+  G+
Sbjct: 166 KLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 200

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.3 bits (151), Expect = 8e-14
 Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 10/102 (9%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
                L+D ++ +    +P    +   HQ++  ++ L  +G+ H D+KPEN++L +    
Sbjct: 85  CSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE---- 138

Query: 61  PYRVKVIDFGSASHV----SKAVCNTYLQSRYYRAPEIILGE 98
              +K+ DFG A+       + + N    +  Y APE++   
Sbjct: 139 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.3 bits (151), Expect = 1e-13
 Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 9/98 (9%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +LY  L   + +   +  +  I  Q    +  L    +IH DLK  NI L     +   V
Sbjct: 89  SLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTV 143

Query: 65  KVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILGE 98
           K+ DFG A+  S+            S  + APE+I  +
Sbjct: 144 KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 61.6 bits (149), Expect = 2e-13
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 7/95 (7%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            L+D+L +     L  K  R I+  +L  +  L +L ++H DLKPENI+L         +
Sbjct: 96  ELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL----DDDMNI 149

Query: 65  KVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILGE 98
           K+ DFG +  +           +  Y APEII   
Sbjct: 150 KLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECS 184

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 60.5 bits (146), Expect = 6e-13
 Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 4/95 (4%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            L+D +    +  +    +   + Q    L  + +  ++H D+KPENIM      +   V
Sbjct: 112 ELFDRIAAEDY-KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK--KASSV 168

Query: 65  KVIDFGSASHVSK-AVCNTYLQSRYYRAPEIILGE 98
           K+IDFG A+ ++   +      +  + APEI+  E
Sbjct: 169 KIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDRE 203

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (143), Expect = 1e-12
 Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 13/103 (12%)

Query: 5   NLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLG-----LIHADLKPENIMLVDP 57
           +L   + +   +   L  +++  ++ Q+  AL +  +       ++H DLKP N+ L   
Sbjct: 91  DLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG- 149

Query: 58  VRQPYRVKVIDFGSASHVSK--AVCNTYLQSRYYRAPEIILGE 98
                 VK+ DFG A  ++   +    ++ + YY +PE +   
Sbjct: 150 ---KQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRM 189

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.2 bits (140), Expect = 4e-12
 Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 8/96 (8%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L   ++        L        +++  L  L   G+++ DLK +NI+    + +   +
Sbjct: 89  DLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNIL----LDKDGHI 142

Query: 65  KVIDFGSASHVS--KAVCNTYLQSRYYRAPEIILGE 98
           K+ DFG         A  NT+  +  Y APEI+LG+
Sbjct: 143 KIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQ 178

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.7 bits (139), Expect = 5e-12
 Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 10/102 (9%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
                L  ++++           R    ++++AL  L   G+IH DLKPENI+L     +
Sbjct: 90  AKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL----NE 143

Query: 61  PYRVKVIDFGSASHVS----KAVCNTYLQSRYYRAPEIILGE 98
              +++ DFG+A  +S    +A  N+++ +  Y +PE++  +
Sbjct: 144 DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 185

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 2e-11
 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 4/95 (4%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           ++++ +  + F  L  + I   +HQV  AL  L    + H D++PENI+     R+   +
Sbjct: 87  DIFERINTSAF-ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT--RRSSTI 143

Query: 65  KVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILGE 98
           K+I+FG A  +           +  Y APE+   +
Sbjct: 144 KIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHD 178

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (132), Expect = 4e-11
 Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 12/103 (11%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           ++  +LY  LK    S     +I   L+Q+L  L  +    ++H DLKP N++L      
Sbjct: 92  LMGADLYKLLKTQHLSN---DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---- 144

Query: 61  PYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIILGE 98
              +K+ DFG A      H        Y+ +R+YRAPEI+L  
Sbjct: 145 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 187

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 55.1 bits (132), Expect = 5e-11
 Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 6/98 (6%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           M   +L+  L Q+         +R    +++  L  +    +++ DLKP NI+L +    
Sbjct: 89  MNGGDLHYHLSQHGVFSEAD--MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE---- 142

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
              V++ D G A   SK   +  + +  Y APE++   
Sbjct: 143 HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKG 180

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (131), Expect = 6e-11
 Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 6/100 (6%)

Query: 2   LEQNLYDFLKQ--NKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR 59
           + + +Y   +        LP+ Y++  ++Q+  +L  +   G+ H D+KP+N++L     
Sbjct: 101 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--- 157

Query: 60  QPYRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILGE 98
               +K+ DFGSA  + +     +Y+ SRYYRAPE+I G 
Sbjct: 158 DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 197

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 7e-11
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 6/99 (6%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
            L Q+L  F+  +  + +PL  I+  L Q+L  L       ++H DLKP+N+++      
Sbjct: 82  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---- 137

Query: 61  PYRVKVIDFGSASHVSKAV--CNTYLQSRYYRAPEIILG 97
              +K+ DFG A      V      + + +YRAPEI+LG
Sbjct: 138 EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 8e-11
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 10/96 (10%)

Query: 9   FLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVID 68
            L  N      L  I+ ++  +L  L  + +  ++H D+K  N+++     +   +K+ D
Sbjct: 105 GLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT----RDGVLKLAD 160

Query: 69  FGSASHVSKA------VCNTYLQSRYYRAPEIILGE 98
           FG A   S A           + + +YR PE++LGE
Sbjct: 161 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE 196

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 9e-11
 Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 5/99 (5%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
            ++Q+L  +L +     +P + I+ ++ Q+L  L  L    ++H DLKP+NI++      
Sbjct: 96  HVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---- 151

Query: 61  PYRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILGE 98
             ++K+ DFG A   S      + + + +YRAPE++L  
Sbjct: 152 SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQS 190

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (128), Expect = 2e-10
 Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 9/96 (9%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
           +L D + +          I  +  + L AL  L    +IH D+K +NI+L         V
Sbjct: 103 SLTDVVTETCMDE---GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL----GMDGSV 155

Query: 65  KVIDFGSASHVS--KAVCNTYLQSRYYRAPEIILGE 98
           K+ DFG  + ++  ++  +T + + Y+ APE++  +
Sbjct: 156 KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 191

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 53.3 bits (127), Expect = 2e-10
 Identities = 19/107 (17%), Positives = 38/107 (35%), Gaps = 10/107 (9%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDP-VRQ 60
           L     + L         +K +     Q+L  +  + +  L++ D+KP+N ++  P  + 
Sbjct: 82  LLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKN 141

Query: 61  PYRVKVIDFGSA---------SHVSKAVCNTYLQSRYYRAPEIILGE 98
              + V+DFG            H+          +  Y +    LG 
Sbjct: 142 ANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGR 188

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 3e-10
 Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 7/101 (6%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           M   +L DFLK      L +  +  +  Q+   +  +++   IH DL+  NI++ D    
Sbjct: 89  MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD---- 144

Query: 61  PYRVKVIDFGSASHVSKA---VCNTYLQSRYYRAPEIILGE 98
               K+ DFG A  +                + APE I   
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 185

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.5 bits (125), Expect = 4e-10
 Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 10/106 (9%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
           L     + L         LK +  +  Q+++ +  +     IH D+KP+N ++    ++ 
Sbjct: 84  LLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG-KKG 142

Query: 62  YRVKVIDFGSASHVSKA---------VCNTYLQSRYYRAPEIILGE 98
             V +IDFG A     A                +  Y +    LG 
Sbjct: 143 NLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGI 188

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.5 bits (125), Expect = 4e-10
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 7/94 (7%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            ++  L++         + R    Q++     L  L LI+ DLKPEN+++     Q   +
Sbjct: 127 EMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYI 180

Query: 65  KVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
           +V DFG A  V      T   +    APEIIL +
Sbjct: 181 QVTDFGFAKRVKGR-TWTLCGTPEALAPEIILSK 213

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 5e-10
 Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 8/102 (7%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           +  +N     ++   + L  + +    +QV   +  L+    +H DL   N+++      
Sbjct: 144 IEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV----TH 199

Query: 61  PYRVKVIDFGSA----SHVSKAVCNTYLQSRYYRAPEIILGE 98
              VK+ DFG A    S  +  V         + APE +   
Sbjct: 200 GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEG 241

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.6 bits (123), Expect = 7e-10
 Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 5/98 (5%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
              +    F    K    P    +    +V  AL  L    +I+ DLKPENI+L      
Sbjct: 84  DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDK---- 139

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
              +K+ DFG A +V   V  T   +  Y APE++  +
Sbjct: 140 NGHIKITDFGFAKYVPD-VTYTLCGTPDYIAPEVVSTK 176

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (123), Expect = 7e-10
 Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 15/109 (13%)

Query: 1   MLEQNLYDFLKQNKFSP-----LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLV 55
               +L+D+L +   +      L L     + H  +  +    +  + H DLK +NI++ 
Sbjct: 83  HEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV- 141

Query: 56  DPVRQPYRVKVIDFG------SASHVSKAVCNTYLQSRYYRAPEIILGE 98
              ++     + D G      SA+       N  + ++ Y APE++   
Sbjct: 142 ---KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 187

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.8 bits (121), Expect = 1e-09
 Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 4/95 (4%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            L+D + +        +    ++ QVL A+  L  LG++H DLKPEN++    + +  ++
Sbjct: 93  ELFDRIVEKG--FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYS-LDEDSKI 149

Query: 65  KVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILGE 98
            + DFG +       V +T   +  Y APE++  +
Sbjct: 150 MISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK 184

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.9 bits (121), Expect = 2e-09
 Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 7/101 (6%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           M   NL D+L++     +    +  +  Q+ +A+  L++   IH DL   N ++     +
Sbjct: 95  MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV----GE 150

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSR---YYRAPEIILGE 98
            + VKV DFG +  ++      +  ++    + APE +   
Sbjct: 151 NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 191

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.6 bits (117), Expect = 4e-09
 Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 4/95 (4%)

Query: 7   YDFLKQNKFSPLPLKYIRPILHQVLTALLKLK-QLGLIHADLKPENIML--VDPVRQPYR 63
              +K+ +   +PL Y++ I  Q+L  L  +  + G+IH D+KPEN+++  VD      +
Sbjct: 111 LALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ 170

Query: 64  VKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
           +K+ D G+A    +   N+  Q+R YR+PE++LG 
Sbjct: 171 IKIADLGNACWYDEHYTNSI-QTREYRSPEVLLGA 204

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (118), Expect = 4e-09
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 3/99 (3%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           +    L+DFL + +   L  +     L Q+L  +  L  L + H DLKPENIML+D    
Sbjct: 95  VAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVP 152

Query: 61  PYRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILGE 98
             R+K+IDFG A  +           +  + APEI+  E
Sbjct: 153 KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 191

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 4e-09
 Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)

Query: 4   QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
           +   + + ++    L   +I+  +   L  L  L Q  ++H DLKP N++L     +   
Sbjct: 83  ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL----DENGV 138

Query: 64  VKVIDFGSASHVSKA--VCNTYLQSRYYRAPEIILG 97
           +K+ DFG A             + +R+YRAPE++ G
Sbjct: 139 LKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFG 174

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 5e-09
 Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 8/96 (8%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            L+  L + +      +  R    ++++AL  L    +++ D+K EN+ML     +   +
Sbjct: 91  ELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML----DKDGHI 144

Query: 65  KVIDFGSASHV--SKAVCNTYLQSRYYRAPEIILGE 98
           K+ DFG         A   T+  +  Y APE++   
Sbjct: 145 KITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.1 bits (116), Expect = 6e-09
 Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 8/85 (9%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
           PL       I  QV   +  L +   +H DL   N ++     +   VK+ DFG + ++ 
Sbjct: 136 PLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV----GENMVVKIADFGLSRNIY 191

Query: 77  KA----VCNTYLQSRYYRAPEIILG 97
            A              +  PE I  
Sbjct: 192 SADYYKADGNDAIPIRWMPPESIFY 216

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 47.9 bits (113), Expect = 9e-09
 Identities = 15/91 (16%), Positives = 36/91 (39%), Gaps = 11/91 (12%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
           L + +   +   + ++    +L  +L  + K    G++H DL   N+++ +       + 
Sbjct: 88  LMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE-----EGIW 142

Query: 66  VIDFGSASHVSKAVCNTYLQ------SRYYR 90
           +IDF  +  V +      L+        Y+ 
Sbjct: 143 IIDFPQSVEVGEEGWREILERDVRNIITYFS 173

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (114), Expect = 1e-08
 Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 10/99 (10%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            L+ FL   +   +P+  +  +LHQV   +  L++   +H DL   N++LV+     +  
Sbjct: 94  PLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN----RHYA 148

Query: 65  KVIDFGSASHVSK-----AVCNTYLQSRYYRAPEIILGE 98
           K+ DFG +  +          +       + APE I   
Sbjct: 149 KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 187

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 2e-08
 Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 8/91 (8%)

Query: 12  QNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS 71
           +     +  +Y+     Q+   +  L+   L+H DL   N+++      P  VK+ DFG 
Sbjct: 102 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT----PQHVKITDFGL 157

Query: 72  ASHVSK----AVCNTYLQSRYYRAPEIILGE 98
           A  +                 + A E IL  
Sbjct: 158 AKLLGAEEKEYHAEGGKVPIKWMALESILHR 188

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 47.8 bits (113), Expect = 2e-08
 Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 3/95 (3%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            L D +      P+  K    ++     AL    Q G+IH D+KP NIM+          
Sbjct: 97  TLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMD 154

Query: 65  KVIDFG-SASHVSKAVCNTYLQSRYYRAPEIILGE 98
             I    + S  S       + +  Y +PE   G+
Sbjct: 155 FGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 189

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (113), Expect = 2e-08
 Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 11/103 (10%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
                L  +L+QN+   +  K I  ++HQV   +  L++   +H DL   N++LV     
Sbjct: 89  AELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT---- 142

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSR-----YYRAPEIILGE 98
            +  K+ DFG +  +         Q+       + APE I   
Sbjct: 143 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 47.9 bits (113), Expect = 2e-08
 Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 17  PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
            L    IR  ++++L AL     +G++H D+KP N+M+     +  ++++ID+G A    
Sbjct: 125 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYH 181

Query: 77  -KAVCNTYLQSRYYRAPEIILG 97
                N  + SRY++ PE+++ 
Sbjct: 182 PGQEYNVRVASRYFKGPELLVD 203

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 2e-08
 Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 7/101 (6%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           +          Q +   L L  +    +Q+ TAL  L+    +H D+   N+++      
Sbjct: 88  LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV----SS 143

Query: 61  PYRVKVIDFGSASHVSKA---VCNTYLQSRYYRAPEIILGE 98
              VK+ DFG + ++  +     +       + APE I   
Sbjct: 144 NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 2e-08
 Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 7/101 (6%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           M + +L DFLK      L L  +  +  Q+ + +  ++++  +H DL+  NI++ +    
Sbjct: 93  MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE---- 148

Query: 61  PYRVKVIDFGSASHVSKA---VCNTYLQSRYYRAPEIILGE 98
               KV DFG A  +                + APE  L  
Sbjct: 149 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 189

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 3e-08
 Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 5/99 (5%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           +LE +    +  +  S L  + +      V   +  L Q   IH DL   NI++ +    
Sbjct: 107 VLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE---- 162

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQ-SRYYRAPEIILGE 98
            Y  K+ DFG +      V  T  +    + A E +   
Sbjct: 163 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYS 201

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 46.4 bits (109), Expect = 5e-08
 Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 7/100 (7%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
            L+Q+L   L   +   L     +  L Q+L  +       ++H DLKP+N+++     +
Sbjct: 81  HLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI----NR 135

Query: 61  PYRVKVIDFGSASHVSKAV--CNTYLQSRYYRAPEIILGE 98
              +K+ DFG A      V      + + +YRAP++++G 
Sbjct: 136 EGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS 175

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 1e-07
 Identities = 19/102 (18%), Positives = 32/102 (31%), Gaps = 9/102 (8%)

Query: 2   LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
                     +       L  +     QV   +  L+    IH DL   N++L       
Sbjct: 92  APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA----TR 147

Query: 62  YRVKVIDFGSASHVSKAVCNTYLQSR-----YYRAPEIILGE 98
             VK+ DFG    + +   +  +Q        + APE +   
Sbjct: 148 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 1e-07
 Identities = 17/102 (16%), Positives = 33/102 (32%), Gaps = 8/102 (7%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
            L             +P  L  +  +  ++   +  L     +H DL   N M+ +    
Sbjct: 113 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE---- 168

Query: 61  PYRVKVIDFGSASHVSK----AVCNTYLQSRYYRAPEIILGE 98
            + VK+ DFG    + +          L    + +PE +   
Sbjct: 169 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG 210

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 2e-07
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           ++     D  K  K   L    I+ +++Q+L  L  +   G+IH DLKP N+     V +
Sbjct: 101 VMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLA----VNE 156

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
              +K++DFG A          Y+ +R+YRAPE+IL  
Sbjct: 157 DCELKILDFGLARQADSE-MTGYVVTRWYRAPEVILNW 193

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 2e-07
 Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 7/94 (7%)

Query: 8   DFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI 67
               +        + +  +   V  A+  L+    +H DL   N ++         VKV 
Sbjct: 87  LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV----NDQGVVKVS 142

Query: 68  DFGSASHVSKAVCNTYLQSR---YYRAPEIILGE 98
           DFG + +V      + + S+    +  PE+++  
Sbjct: 143 DFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 176

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (104), Expect = 3e-07
 Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 7/101 (6%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
            +E        + +      + +  +   V   +  L++  +IH DL   N ++     +
Sbjct: 81  FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV----GE 136

Query: 61  PYRVKVIDFGSASHVSKA---VCNTYLQSRYYRAPEIILGE 98
              +KV DFG    V                + +PE+    
Sbjct: 137 NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 177

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 3e-07
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           +      D     K   L   +++ +++Q+L  L  +    +IH DLKP N+     V +
Sbjct: 101 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA----VNE 156

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
              +K++DFG A H        Y+ +R+YRAPEI+L  
Sbjct: 157 DCELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNW 193

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (102), Expect = 4e-07
 Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 6/80 (7%)

Query: 21  KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV- 79
           + ++  L Q+L  L       ++H DLKP+N+++     +   +K+ +FG A      V 
Sbjct: 101 EIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI----NRNGELKLANFGLARAFGIPVR 156

Query: 80  -CNTYLQSRYYRAPEIILGE 98
             +  + + +YR P+++ G 
Sbjct: 157 CYSAEVVTLWYRPPDVLFGA 176

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 6e-07
 Identities = 17/89 (19%), Positives = 29/89 (32%)

Query: 10  LKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF 69
           + ++    L L+ +    +QV   +  L     IH DL   NI+L            +  
Sbjct: 134 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR 193

Query: 70  GSASHVSKAVCNTYLQSRYYRAPEIILGE 98
              +  +  V         + APE I   
Sbjct: 194 DIKNDSNYVVKGNARLPVKWMAPESIFNC 222

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.2 bits (101), Expect = 6e-07
 Identities = 18/98 (18%), Positives = 32/98 (32%), Gaps = 11/98 (11%)

Query: 8   DFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI 67
           D   +       +  +  +L  +   +  L  +  +H DL   NI++          KV 
Sbjct: 115 DSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNS----NLVCKVS 170

Query: 68  DFGSASHVSKAVCNTYLQSR-------YYRAPEIILGE 98
           DFG +  +     +    S         + APE I   
Sbjct: 171 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 208

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (99), Expect = 1e-06
 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 5/80 (6%)

Query: 19  PLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA 78
             + +  +L+Q+L  +  L   G+IH DLKP NI+    V+    +K++DFG A     +
Sbjct: 117 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV----VKSDCTLKILDFGLARTAGTS 172

Query: 79  VCNT-YLQSRYYRAPEIILG 97
              T Y+ +RYYRAPE+ILG
Sbjct: 173 FMMTPYVVTRYYRAPEVILG 192

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 2e-06
 Identities = 21/98 (21%), Positives = 34/98 (34%), Gaps = 9/98 (9%)

Query: 6   LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
             D   + K     +  +  +L  +   +  L  +  +H DL   NI++          K
Sbjct: 95  ALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNS----NLVCK 150

Query: 66  VIDFGSASHVSKAVCNTYLQSR-----YYRAPEIILGE 98
           V DFG +  +      TY  S       + APE I   
Sbjct: 151 VSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 188

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 8e-06
 Identities = 23/87 (26%), Positives = 32/87 (36%), Gaps = 8/87 (9%)

Query: 16  SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV 75
             L L+++     QV   +  L     IH DL   NI+L     +   VK+ DFG A  +
Sbjct: 129 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKICDFGLARDI 184

Query: 76  SK----AVCNTYLQSRYYRAPEIILGE 98
            K               + APE I   
Sbjct: 185 YKDPDYVRKGDARLPLKWMAPETIFDR 211

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 2e-05
 Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 9/96 (9%)

Query: 5   NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
            L+  L Q +        ++  + +++ AL  L +LG+I+ D+K ENI+L         V
Sbjct: 115 ELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL----DSNGHV 168

Query: 65  KVIDFGSASHVSKA---VCNTYLQSRYYRAPEIILG 97
            + DFG +             +  +  Y AP+I+ G
Sbjct: 169 VLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 204

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 2e-05
 Identities = 14/86 (16%), Positives = 24/86 (27%)

Query: 13  NKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA 72
           N    L  K +    +QV   +  L     IH DL   N+++ +          +     
Sbjct: 127 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 186

Query: 73  SHVSKAVCNTYLQSRYYRAPEIILGE 98
                           + APE +   
Sbjct: 187 HIDYYKKTTNGRLPVKWMAPEALFDR 212

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 4e-05
 Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 11/104 (10%)

Query: 1   MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
           M   +L +F++    +P     I     QV   +  L     +H DL   N ML     +
Sbjct: 111 MKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKKFVHRDLAARNCML----DE 165

Query: 61  PYRVKVIDFGSASHVSKAVCNTYLQSR------YYRAPEIILGE 98
            + VKV DFG A  +     ++            + A E +  +
Sbjct: 166 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 209

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	98
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.93
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.92
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.92
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.92
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.92
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.91
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.91
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.91
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.9
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.9
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.9
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.9
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.9
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.9
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.89
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.89
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.89
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.89
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.89
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.88
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.88
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.88
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.88
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.88
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.88
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.88
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.88
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.87
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.86
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.86
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.86
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.86
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.86
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.86
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.85
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.85
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.85
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.84
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.84
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.83
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.83
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.83
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.83
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.83
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.83
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.82
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.82
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.81
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.81
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.81
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.81
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.8
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.8
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.8
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.8
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.79
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.79
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.78
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.74
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.67
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.36
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.08
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	92.32
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	91.54
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	88.23
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	82.6

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.7e-26  Score=130.28  Aligned_cols=92  Identities=25%  Similarity=0.348  Sum_probs=80.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|||+++++|||++|.|+++    +..+.++|+|||++........
T Consensus        88 ~~~g~L~~~l~~~~--~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill----~~~~~~kl~DFG~a~~~~~~~~  161 (263)
T d2j4za1          88 APLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL----GSAGELKIADFGWSVHAPSSRR  161 (263)
T ss_dssp             CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECCCCSCSCCCCCCC
T ss_pred             cCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeeeecccccee----cCCCCEeecccceeeecCCCcc
Confidence            45789999998655  69999999999999999999999999999999999999    6667899999999987655555


Q ss_pred             ceecccccccCcccccCC
Q psy11820         81 NTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~~   98 (98)
                      ....||+.|+|||++.++
T Consensus       162 ~~~~Gt~~Y~APE~~~~~  179 (263)
T d2j4za1         162 TTLCGTLDYLPPEMIEGR  179 (263)
T ss_dssp             EETTEEGGGCCHHHHTTC
T ss_pred             cccCCCCcccCHHHHcCC
Confidence            566799999999998753

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.5e-26  Score=132.62  Aligned_cols=91  Identities=26%  Similarity=0.498  Sum_probs=77.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~   79 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|||+ ++|+|||++|.||++    ...+.++|+|||++.......
T Consensus        86 ~~gg~L~~~l~~~~--~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl----~~~~~vkl~DFGla~~~~~~~  159 (322)
T d1s9ja_          86 MDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSM  159 (322)
T ss_dssp             CTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE----CTTCCEEECCCCCCHHHHHHT
T ss_pred             CCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeE----CCCCCEEEeeCCCccccCCCc
Confidence            46789999998654  69999999999999999999997 599999999999999    667789999999998765544


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      ..+..||+.|+|||++.+
T Consensus       160 ~~~~~GT~~Y~APEvl~~  177 (322)
T d1s9ja_         160 ANSFVGTRSYMSPERLQG  177 (322)
T ss_dssp             C---CCSSCCCCHHHHHC
T ss_pred             cccccCCccccCchHHcC
Confidence            556789999999999875

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=6.3e-26  Score=129.77  Aligned_cols=91  Identities=26%  Similarity=0.467  Sum_probs=77.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|||+++++|||++|.||++    +..+.++|+|||++......  
T Consensus        85 ~~gg~L~~~l~~~~--~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl----~~~~~~KL~DFG~a~~~~~~~~  158 (271)
T d1nvra_          85 CSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNR  158 (271)
T ss_dssp             CTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTCCEEECCCTTCEECEETTE
T ss_pred             cCCCcHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEE----CCCCCEEEccchhheeeccCCc
Confidence            35789999987544  79999999999999999999999999999999999999    66678999999999875322  


Q ss_pred             --ccceecccccccCcccccC
Q psy11820         79 --VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~~   97 (98)
                        ......||+.|+|||++.+
T Consensus       159 ~~~~~~~~GT~~Y~APE~~~~  179 (271)
T d1nvra_         159 ERLLNKMCGTLPYVAPELLKR  179 (271)
T ss_dssp             ECCBCCCCSCGGGSCTHHHHC
T ss_pred             cccccceeeCcCccCHhHhcC
Confidence              2345679999999999865

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5e-25  Score=129.23  Aligned_cols=92  Identities=24%  Similarity=0.321  Sum_probs=79.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      |.+|+|.+++....  .+++..++.++.|++.|+.|+|+++++|||++|.||++    +..+.++|+|||++.....  .
T Consensus        87 ~~gg~L~~~~~~~~--~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl----~~~g~vkl~DFG~a~~~~~~~~  160 (337)
T d1o6la_          87 ANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML----DKDGHIKITDFGLCKEGISDGA  160 (337)
T ss_dssp             CTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCSCCTTC
T ss_pred             cCCCchhhhhhccc--CCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEe----cCCCCEEEeecccccccccCCc
Confidence            56899999998765  78999999999999999999999999999999999999    6778999999999986533  2


Q ss_pred             ccceecccccccCcccccCC
Q psy11820         79 VCNTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~~   98 (98)
                      .....+||+.|+|||++.++
T Consensus       161 ~~~~~~GT~~Y~aPE~~~~~  180 (337)
T d1o6la_         161 TMKTFCGTPEYLAPEVLEDN  180 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSS
T ss_pred             ccccceeCHHHhhhhhccCC
Confidence            33557899999999998753

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4e-25  Score=126.35  Aligned_cols=92  Identities=28%  Similarity=0.376  Sum_probs=78.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~   78 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|||+++  ++||||+|.||++.   ...+.++|+|||++......
T Consensus        94 ~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~---~~~~~~Kl~DFGla~~~~~~  168 (270)
T d1t4ha_          94 MTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT---GPTGSVKIGDLGLATLKRAS  168 (270)
T ss_dssp             CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES---STTSCEEECCTTGGGGCCTT
T ss_pred             CCCCcHHHHHhccc--cccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceee---CCCCCEEEeecCcceeccCC
Confidence            46889999998755  6999999999999999999999998  99999999999992   23467999999999765544


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......||+.|+|||++.+
T Consensus       169 ~~~~~~GT~~Y~aPE~~~~  187 (270)
T d1t4ha_         169 FAKAVIGTPEFMAPEMYEE  187 (270)
T ss_dssp             SBEESCSSCCCCCGGGGGT
T ss_pred             ccCCcccCccccCHHHhCC
Confidence            4556789999999999864

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.8e-25  Score=126.38  Aligned_cols=92  Identities=28%  Similarity=0.331  Sum_probs=74.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+|+|.+++...+ ..+++..+..++.|++.|+.|||+++++|||+++.||++    +..+.++|+|||++......  
T Consensus        85 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl----~~~~~~Kl~DFGla~~~~~~~~  159 (276)
T d1uwha_          85 CEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVKIGDFGLATVKSRWSG  159 (276)
T ss_dssp             CCEEEHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----ETTSSEEECCCCCSCC------
T ss_pred             CCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEE----cCCCCEEEccccceeeccccCC
Confidence            46899999997654 358999999999999999999999999999999999999    56678999999998765321  


Q ss_pred             --ccceecccccccCcccccC
Q psy11820         79 --VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~~   97 (98)
                        ......+|+.|+|||++.+
T Consensus       160 ~~~~~~~~gt~~y~APE~l~~  180 (276)
T d1uwha_         160 SHQFEQLSGSILWMAPEVIRM  180 (276)
T ss_dssp             ------CCCCGGGCCHHHHTT
T ss_pred             cccccccccCcccCCHHHHhc
Confidence              2234578999999999853

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=9.1e-25  Score=126.10  Aligned_cols=90  Identities=27%  Similarity=0.405  Sum_probs=77.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+|+|.+++...   .+++..+..++.|++.|+.|||+++++||||+|.||++    +..+.++|+|||++......  
T Consensus        99 ~~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl----~~~~~vkl~DFG~a~~~~~~~~  171 (293)
T d1yhwa1          99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL----GMDGSVKLTDFGFCAQITPEQS  171 (293)
T ss_dssp             CTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECCSTTC
T ss_pred             cCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEE----CCCCcEeeccchhheeeccccc
Confidence            4689999988764   49999999999999999999999999999999999999    66678999999999876432  


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......||+.|+|||++.+
T Consensus       172 ~~~~~~gt~~Y~aPE~~~~  190 (293)
T d1yhwa1         172 KRSTMVGTPYWMAPEVVTR  190 (293)
T ss_dssp             CBCCCCSCGGGCCHHHHSS
T ss_pred             cccccccCCCccChhhhcC
Confidence            3345679999999999875

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.91  E-value=8.1e-25  Score=129.43  Aligned_cols=91  Identities=25%  Similarity=0.312  Sum_probs=80.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|+|+++++|||++|.||++    +..+.++|+|||++........
T Consensus        89 ~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl----~~~g~iKl~DFGla~~~~~~~~  162 (364)
T d1omwa3          89 MNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL----DEHGHVRISDLGLACDFSKKKP  162 (364)
T ss_dssp             CCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CSSSCEEECCCTTCEECSSSCC
T ss_pred             cCCCcHHHHHHhcc--cccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEE----cCCCcEEEeeeceeeecCCCcc
Confidence            46899999998765  68999999999999999999999999999999999999    6677899999999987765555


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....||+.|+|||++.+
T Consensus       163 ~~~~GT~~y~APE~~~~  179 (364)
T d1omwa3         163 HASVGTHGYMAPEVLQK  179 (364)
T ss_dssp             CSCCSCGGGCCHHHHST
T ss_pred             cccccccccchhHHhhc
Confidence            56789999999999853

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.2e-24  Score=125.30  Aligned_cols=91  Identities=27%  Similarity=0.504  Sum_probs=76.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+|+|.+++...+  .+++..+..++.|++.|+.|+|+++++|||+++.||++    +..+.+++.|||++......  
T Consensus        90 ~~gg~L~~~~~~~~--~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll----~~~~~vkl~DFG~a~~~~~~~~  163 (288)
T d1uu3a_          90 AKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESK  163 (288)
T ss_dssp             CTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTSCEEECCCTTCEECC----
T ss_pred             cCCCCHHHhhhccC--CCCHHHHHHHHHHHHHHHHhhccccEEcCcCCcccccc----CCCceEEecccccceecccCCc
Confidence            45789999988765  79999999999999999999999999999999999999    66778999999999876422  


Q ss_pred             --ccceecccccccCcccccC
Q psy11820         79 --VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~~   97 (98)
                        ...+..||+.|+|||++.+
T Consensus       164 ~~~~~~~~GT~~Y~APE~~~~  184 (288)
T d1uu3a_         164 QARANSFVGTAQYVSPELLTE  184 (288)
T ss_dssp             ------CCCCGGGCCHHHHHT
T ss_pred             ccccccccCCccccCceeecc
Confidence              2234579999999999865

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=2.1e-24  Score=127.08  Aligned_cols=91  Identities=30%  Similarity=0.366  Sum_probs=79.2

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+|+|.+++...+  .+++..+..++.|++.||.|||+++++||||+|.||++    +..+.++|+|||++...... .
T Consensus       123 ~~~g~l~~~l~~~~--~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl----~~~g~ikL~DFG~a~~~~~~-~  195 (350)
T d1rdqe_         123 VAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGR-T  195 (350)
T ss_dssp             CTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECSSC-B
T ss_pred             ccccchhhhHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHccc----CCCCCEEeeeceeeeecccc-c
Confidence            46889999998765  69999999999999999999999999999999999999    66778999999999876432 3


Q ss_pred             ceecccccccCcccccCC
Q psy11820         81 NTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~~   98 (98)
                      .+..||+.|+|||++.++
T Consensus       196 ~~~~Gt~~Y~APE~~~~~  213 (350)
T d1rdqe_         196 WTLCGTPEALAPEIILSK  213 (350)
T ss_dssp             CCCEECGGGCCHHHHTTC
T ss_pred             ccccCccccCCHHHHcCC
Confidence            456789999999998753

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2e-24  Score=126.57  Aligned_cols=96  Identities=23%  Similarity=0.356  Sum_probs=80.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.||+|.+++.......+++..+..++.|++.|+.|||+++++|||++|.||++... ...+.++++|||++...... .
T Consensus        91 ~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~-~~~~~~Kl~DFG~a~~~~~~~~  169 (335)
T d2ozaa1          91 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNS  169 (335)
T ss_dssp             CCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCS-STTCCEEECCCTTCEECCCCCC
T ss_pred             CCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccc-cccccccccccceeeeccCCCc
Confidence            458999999987655579999999999999999999999999999999999999432 23457999999999865432 3


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....||+.|+|||++.+
T Consensus       170 ~~~~~gt~~y~aPE~~~~  187 (335)
T d2ozaa1         170 LTTPCYTPYYVAPEVLGP  187 (335)
T ss_dssp             CCCCSCCCSSCCCCCCCG
T ss_pred             cccccCCcccCCcHHHcC
Confidence            355679999999999864

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=4e-24  Score=124.15  Aligned_cols=89  Identities=37%  Similarity=0.513  Sum_probs=75.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+|+|..+.....  .+++..+..++.|++.|+.|||+++++||||+|.||++    +..+.++|+|||++......  
T Consensus        97 ~~~g~l~~~~~~~~--~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl----~~~~~~Kl~DFG~a~~~~~~--  168 (309)
T d1u5ra_          97 CLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL----SEPGLVKLGDFGSASIMAPA--  168 (309)
T ss_dssp             CSEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEE----ETTTEEEECCCTTCBSSSSB--
T ss_pred             cCCCchHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEE----CCCCCEEEeecccccccCCC--
Confidence            35778877776654  79999999999999999999999999999999999999    56678999999999765432  


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....||+.|+|||++.+
T Consensus       169 ~~~~GT~~Y~APE~~~~  185 (309)
T d1u5ra_         169 NSFVGTPYWMAPEVILA  185 (309)
T ss_dssp             CCCCSCGGGCCHHHHTT
T ss_pred             CccccCccccCHHHHhc
Confidence            35578999999999753

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=4.7e-24  Score=123.77  Aligned_cols=94  Identities=27%  Similarity=0.410  Sum_probs=67.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|||+++++|||++|.|+++... ...+.++++|||++...... .
T Consensus        89 ~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~-~~~~~vkl~DFG~a~~~~~~~~  165 (307)
T d1a06a_          89 VSGGELFDRIVEKG--FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL-DEDSKIMISDFGLSKMEDPGSV  165 (307)
T ss_dssp             CCSCBHHHHHHTCS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS-STTCCEEECCC-----------
T ss_pred             cCCCcHHHhhhccc--CCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeeccc-CCCceEEEeccceeEEccCCCe
Confidence            45799999998654  79999999999999999999999999999999999999432 23467999999999765432 3


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      ..+..||+.|+|||++.+
T Consensus       166 ~~~~~GT~~y~APE~~~~  183 (307)
T d1a06a_         166 LSTACGTPGYVAPEVLAQ  183 (307)
T ss_dssp             -------CTTSCHHHHTT
T ss_pred             eeeeeeCccccCcHHHcC
Confidence            345679999999999875

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.1e-24  Score=123.63  Aligned_cols=91  Identities=25%  Similarity=0.429  Sum_probs=76.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+|+|.+++.... ..+++..+..++.|++.|+.|||+++++|||++|.||++    +..+.++|+|||++......  
T Consensus        91 ~~~g~L~~~~~~~~-~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll----~~~~~~Kl~DFG~a~~~~~~~~  165 (288)
T d2jfla1          91 CAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF----TLDGDIKLADFGVSAKNTRTIQ  165 (288)
T ss_dssp             CTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECHHHHH
T ss_pred             CCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeE----CCCCCEEEEechhhhccCCCcc
Confidence            46899999876542 369999999999999999999999999999999999999    66678999999999765432  


Q ss_pred             ccceecccccccCccccc
Q psy11820         79 VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~   96 (98)
                      ...+..||+.|+|||++.
T Consensus       166 ~~~~~~Gt~~y~APE~l~  183 (288)
T d2jfla1         166 RRDSFIGTPYWMAPEVVM  183 (288)
T ss_dssp             HHTCCCSCCTTCCHHHHT
T ss_pred             cccccccccccCCHHHHh
Confidence            234567899999999974

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=8.6e-24  Score=123.06  Aligned_cols=91  Identities=30%  Similarity=0.418  Sum_probs=78.8

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.||+|.+++....  .+++..+..++.|++.|+.|+|+++++||||+|.||++    +..+.++|+|||++...... .
T Consensus        86 ~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl----~~~g~vkL~DFG~a~~~~~~-~  158 (316)
T d1fota_          86 IEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL----DKNGHIKITDFGFAKYVPDV-T  158 (316)
T ss_dssp             CCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE----CTTSCEEECCCSSCEECSSC-B
T ss_pred             cCCccccccccccc--cccccHHHHHHHHHHHhhhhhccCcEEccccCchheeE----cCCCCEEEecCccceEeccc-c
Confidence            46789999988765  68899999999999999999999999999999999999    66779999999999876443 3


Q ss_pred             ceecccccccCcccccCC
Q psy11820         81 NTYLQSRYYRAPEIILGE   98 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~~   98 (98)
                      .+.+||+.|+|||++.++
T Consensus       159 ~~~~Gt~~Y~APE~l~~~  176 (316)
T d1fota_         159 YTLCGTPDYIAPEVVSTK  176 (316)
T ss_dssp             CCCCSCTTTCCHHHHTTC
T ss_pred             ccccCcccccCHHHHcCC
Confidence            456799999999998753

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.1e-24  Score=123.49  Aligned_cols=93  Identities=28%  Similarity=0.284  Sum_probs=70.9

Q ss_pred             CcchhHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEE
Q psy11820          1 MLEQNLYDFLKQNK--------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKV   66 (98)
Q Consensus         1 ~~~~~L~~~~~~~~--------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l   66 (98)
                      +.+|+|.+++....              ...+++..+..++.|++.|+.|||+++++||||+|.||++    +..+.+||
T Consensus       100 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl----~~~~~~Kl  175 (299)
T d1ywna1         100 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKI  175 (299)
T ss_dssp             CTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CGGGCEEE
T ss_pred             cCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeE----CCCCcEEE
Confidence            46899999997542              1247889999999999999999999999999999999999    66778999


Q ss_pred             eeecCceeeccc----ccceecccccccCcccccC
Q psy11820         67 IDFGSASHVSKA----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        67 ~~~g~~~~~~~~----~~~~~~~~~~~~~pe~~~~   97 (98)
                      +|||+++.....    ......||+.|+|||++.+
T Consensus       176 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~  210 (299)
T d1ywna1         176 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  210 (299)
T ss_dssp             CC------CCSCTTSCCTTSCCCGGGGCCHHHHHH
T ss_pred             ccCcchhhccccccccccCceeeCccccchhHhhc
Confidence            999999765322    2234568999999998754

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.89  E-value=1e-23  Score=124.12  Aligned_cols=94  Identities=26%  Similarity=0.444  Sum_probs=78.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      |.+|+|.+++.... +.+++..+..++.|++.||.|||+++++||||++.||++..  ...+.++|+|||++...... .
T Consensus       105 ~~gg~L~~~l~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~--~~~~~vkL~DFG~a~~~~~~~~  181 (350)
T d1koaa2         105 MSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT--KRSNELKLIDFGLTAHLDPKQS  181 (350)
T ss_dssp             CCSCBHHHHHTCTT-SCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS--TTSCCEEECCCTTCEECCTTSC
T ss_pred             CCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeecc--CCCCeEEEeecchheecccccc
Confidence            46899999996442 36999999999999999999999999999999999999943  12457999999999876543 3


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      ..+..+|+.|+|||++.+
T Consensus       182 ~~~~~gT~~Y~aPEv~~~  199 (350)
T d1koaa2         182 VKVTTGTAEFAAPEVAEG  199 (350)
T ss_dssp             EEEECSCTTTCCHHHHHT
T ss_pred             cceecCcccccCHHHHcC
Confidence            456788999999999865

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=6.4e-24  Score=122.21  Aligned_cols=93  Identities=24%  Similarity=0.280  Sum_probs=78.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+|+|.+++.......+++..+..++.|++.|+.|||+++++|||+++.||++    +..+.++|+|||++........
T Consensus        95 ~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl----~~~~~~Kl~DFG~a~~~~~~~~  170 (287)
T d1opja_          95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV----GENHLVKVADFGLSRLMTGDTY  170 (287)
T ss_dssp             CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEECCCCCTTTCCSSSS
T ss_pred             ccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEE----CCCCcEEEccccceeecCCCCc
Confidence            467999999987766678999999999999999999999999999999999999    6677899999999976543221


Q ss_pred             ---ceecccccccCcccccC
Q psy11820         81 ---NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ---~~~~~~~~~~~pe~~~~   97 (98)
                         ....+++.|+|||++.+
T Consensus       171 ~~~~~~~g~~~y~aPE~~~~  190 (287)
T d1opja_         171 TAHAGAKFPIKWTAPESLAY  190 (287)
T ss_dssp             EEETTEEECGGGCCHHHHHH
T ss_pred             eeeccccccccccChHHHcC
Confidence               22346788999998753

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=7e-24  Score=123.79  Aligned_cols=93  Identities=20%  Similarity=0.265  Sum_probs=75.5

Q ss_pred             CcchhHHHHHhhCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCC
Q psy11820          1 MLEQNLYDFLKQNKF---------------------SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR   59 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~---------------------~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~   59 (98)
                      +.+|+|.+++.....                     ..+++..+..++.|++.|+.|||+++|+||||+|.||++    +
T Consensus       123 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill----~  198 (325)
T d1rjba_         123 CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV----T  198 (325)
T ss_dssp             CTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEE----E
T ss_pred             CCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhcccc----c
Confidence            468999999975431                     247899999999999999999999999999999999999    6


Q ss_pred             CCccEEEeeecCceeecccc----cceecccccccCcccccC
Q psy11820         60 QPYRVKVIDFGSASHVSKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        60 ~~~~~~l~~~g~~~~~~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      ..+.++|+|||+++......    .....+|+.|+|||++.+
T Consensus       199 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~  240 (325)
T d1rjba_         199 HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE  240 (325)
T ss_dssp             TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHH
T ss_pred             cCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcC
Confidence            66789999999997654321    134457899999998753

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.3e-23  Score=120.46  Aligned_cols=91  Identities=25%  Similarity=0.281  Sum_probs=75.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|+|+++++|||+++.||++    +..+.++++|||++....... 
T Consensus        89 ~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill----~~~~~~kl~DFGla~~~~~~~~  162 (277)
T d1xbba_          89 AELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL----VTQHYAKISDFGLSKALRADEN  162 (277)
T ss_dssp             CTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----EETTEEEECCCTTCEECCTTCS
T ss_pred             CCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcc----cccCcccccchhhhhhcccccc
Confidence            46899999998765  79999999999999999999999999999999999999    556689999999998654321 


Q ss_pred             ----cceecccccccCcccccC
Q psy11820         80 ----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ----~~~~~~~~~~~~pe~~~~   97 (98)
                          .....+|+.|+|||++.+
T Consensus       163 ~~~~~~~~~gt~~y~APE~l~~  184 (277)
T d1xbba_         163 YYKAQTHGKWPVKWYAPECINY  184 (277)
T ss_dssp             EEEC----CCCGGGCCHHHHHH
T ss_pred             ccccccccCCCceecCchhhcC
Confidence                123457889999998753

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.6e-23  Score=119.29  Aligned_cols=95  Identities=34%  Similarity=0.506  Sum_probs=79.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+|+|.+++...+  .+++..+..++.|++.|+.|||+.+++|||+++.|+++...+.....+++.|||++...... .
T Consensus        95 ~~gg~L~~~i~~~~--~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~  172 (293)
T d1jksa_          95 VAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE  172 (293)
T ss_dssp             CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCB
T ss_pred             CCCccccchhcccc--ccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCcc
Confidence            46899999998765  69999999999999999999999999999999999999554334456999999999876533 3


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      ..+..+++.|+|||++.+
T Consensus       173 ~~~~~~t~~y~APE~~~~  190 (293)
T d1jksa_         173 FKNIFGTPEFVAPEIVNY  190 (293)
T ss_dssp             CSCCCCCGGGCCHHHHTT
T ss_pred             ccccCCCCcccCHHHHcC
Confidence            345678899999999865

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=6.6e-24  Score=121.24  Aligned_cols=93  Identities=24%  Similarity=0.398  Sum_probs=68.3

Q ss_pred             CcchhHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcC-----CcccCCCCCcEEEecCCCCCccEEEeeecCce
Q psy11820          1 MLEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLG-----LIHADLKPENIMLVDPVRQPYRVKVIDFGSAS   73 (98)
Q Consensus         1 ~~~~~L~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~-----~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~   73 (98)
                      +.+|+|.+++...  ....+++..++.++.|++.|+.|+|+.+     ++||||+|.||++    +..+.++|+|||++.
T Consensus        87 ~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll----~~~~~vkl~DFG~a~  162 (269)
T d2java1          87 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL----DGKQNVKLGDFGLAR  162 (269)
T ss_dssp             CTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEE----CTTSCEEECCHHHHH
T ss_pred             CCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCc----CCCCcEEEeecccee
Confidence            4589999998642  2346999999999999999999999976     9999999999999    667789999999997


Q ss_pred             eeccc--ccceecccccccCcccccC
Q psy11820         74 HVSKA--VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        74 ~~~~~--~~~~~~~~~~~~~pe~~~~   97 (98)
                      .....  ......+|+.|+|||++.+
T Consensus       163 ~~~~~~~~~~~~~gt~~Y~APE~l~~  188 (269)
T d2java1         163 ILNHDTSFAKAFVGTPYYMSPEQMNR  188 (269)
T ss_dssp             HC-----------CCCSCCCHHHHTT
T ss_pred             ecccCCCccccCCCCcccCCHHHHcC
Confidence            65432  2345678999999999865

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=6.9e-24  Score=121.29  Aligned_cols=93  Identities=25%  Similarity=0.313  Sum_probs=77.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      +.+|+|.+++.......+++..+..++.|++.|+.|+|+++++||||++.||++    +..+.++|+|||+++...... 
T Consensus        89 ~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll----~~~~~~Kl~DFGla~~~~~~~~  164 (272)
T d1qpca_          89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV----SDTLSCKIADFGLARLIEDNEY  164 (272)
T ss_dssp             CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTSCEEECCCTTCEECSSSCE
T ss_pred             CCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheee----ecccceeeccccceEEccCCcc
Confidence            468899998765443358999999999999999999999999999999999999    677789999999998764321 


Q ss_pred             --cceecccccccCcccccC
Q psy11820         80 --CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 --~~~~~~~~~~~~pe~~~~   97 (98)
                        .....+++.|+|||++.+
T Consensus       165 ~~~~~~~gt~~y~APE~~~~  184 (272)
T d1qpca_         165 TAREGAKFPIKWTAPEAINY  184 (272)
T ss_dssp             ECCTTCCCCTTTSCHHHHHH
T ss_pred             ccccccCCcccccChHHHhC
Confidence              233457889999998753

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.5e-23  Score=117.84  Aligned_cols=92  Identities=21%  Similarity=0.274  Sum_probs=69.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+|+|.+++.... ..++++.+..++.|++.|+.|+|+++++|||+++.||++    +..+.++|+|||++......  
T Consensus        82 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill----~~~~~~Kl~DFGla~~~~~~~~  156 (263)
T d1sm2a_          82 MEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV----GENQVIKVSDFGMTRFVLDDQY  156 (263)
T ss_dssp             CTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEE----CGGGCEEECSCC----------
T ss_pred             cCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheee----cCCCCeEecccchheeccCCCc
Confidence            46899999987543 368899999999999999999999999999999999999    66778999999999765432  


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+|+.|+|||++.+
T Consensus       157 ~~~~~~~gt~~y~aPE~l~~  176 (263)
T d1sm2a_         157 TSSTGTKFPVKWASPEVFSF  176 (263)
T ss_dssp             --------CTTSCCHHHHTT
T ss_pred             eeecceecCcccCChHHhcC
Confidence             1223467889999999865

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=6.4e-23  Score=119.53  Aligned_cols=91  Identities=27%  Similarity=0.391  Sum_probs=78.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~   78 (98)
                      +.+|+|.+++....  .+++..+..++.|++.|+.|||+++++|||+++.||++    +..+.+++.|||++.....  .
T Consensus        85 ~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~----~~~~~~kl~DFG~a~~~~~~~~  158 (320)
T d1xjda_          85 LNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL----DKDGHIKIADFGMCKENMLGDA  158 (320)
T ss_dssp             CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCCCCTTC
T ss_pred             cCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceee----cCCCceeccccchhhhcccccc
Confidence            46899999998755  68999999999999999999999999999999999999    6777999999999876532  2


Q ss_pred             ccceecccccccCcccccC
Q psy11820         79 VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......||+.|+|||++.+
T Consensus       159 ~~~~~~gt~~y~aPE~~~~  177 (320)
T d1xjda_         159 KTNTFCGTPDYIAPEILLG  177 (320)
T ss_dssp             CBCCCCSCGGGCCHHHHTT
T ss_pred             cccccCCCCCcCCHHHHcC
Confidence            2344578999999999875

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.9e-23  Score=118.72  Aligned_cols=90  Identities=32%  Similarity=0.512  Sum_probs=76.4

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccce
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT   82 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~   82 (98)
                      ++++.+++....  .+++..+..++.|++.|+.|+|+++++|||++|.||++..   ..+.+++.|||++.........+
T Consensus        94 ~~~l~~~~~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~---~~~~vkl~DFG~a~~~~~~~~~~  168 (273)
T d1xwsa_          94 VQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL---NRGELKLIDFGSGALLKDTVYTD  168 (273)
T ss_dssp             EEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET---TTTEEEECCCTTCEECCSSCBCC
T ss_pred             cchHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEec---CCCeEEECccccceecccccccc
Confidence            367888887654  6999999999999999999999999999999999999932   34589999999998765555566


Q ss_pred             ecccccccCcccccC
Q psy11820         83 YLQSRYYRAPEIILG   97 (98)
Q Consensus        83 ~~~~~~~~~pe~~~~   97 (98)
                      ..||+.|+|||++.+
T Consensus       169 ~~GT~~y~aPE~~~~  183 (273)
T d1xwsa_         169 FDGTRVYSPPEWIRY  183 (273)
T ss_dssp             CCSCGGGSCHHHHHH
T ss_pred             cccCCCcCCHHHHcC
Confidence            789999999998753

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=8e-23  Score=118.18  Aligned_cols=92  Identities=24%  Similarity=0.330  Sum_probs=68.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      |.+|+|.+++.... +.+++..+..++.|++.|+.|||+++++|||+++.||++    +..+.++|+|||+++...... 
T Consensus       109 ~~~g~L~~~~~~~~-~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl----~~~~~~Kl~DFGla~~~~~~~~  183 (299)
T d1jpaa_         109 MENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV----NSNLVCKVSDFGLSRFLEDDTS  183 (299)
T ss_dssp             CTTEEHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECCC-----------
T ss_pred             cCCCcceeeecccc-CCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEE----CCCCcEEECCcccceEccCCCC
Confidence            46899999887643 368999999999999999999999999999999999999    677789999999997653221 


Q ss_pred             ------cceecccccccCcccccC
Q psy11820         80 ------CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ------~~~~~~~~~~~~pe~~~~   97 (98)
                            .....+++.|+|||++.+
T Consensus       184 ~~~~~~~~~~~~t~~y~aPE~~~~  207 (299)
T d1jpaa_         184 DPTYTSALGGKIPIRWTAPEAIQY  207 (299)
T ss_dssp             ------------CGGGSCHHHHHS
T ss_pred             cceeeecccccCCccccCHHHHhc
Confidence                  112346788999998764

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.88  E-value=8.4e-23  Score=120.31  Aligned_cols=94  Identities=24%  Similarity=0.419  Sum_probs=78.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+|+|.+++.... ..+++..+..++.|++.||.|||+++++||||+|.||++..  ...+.++|+|||++...... .
T Consensus       108 ~~gg~L~~~~~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~--~~~~~vkL~DFGla~~~~~~~~  184 (352)
T d1koba_         108 LSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET--KKASSVKIIDFGLATKLNPDEI  184 (352)
T ss_dssp             CCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS--TTCCCEEECCCTTCEECCTTSC
T ss_pred             CCCChHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccc--cCCCeEEEeecccceecCCCCc
Confidence            45799999876543 35999999999999999999999999999999999999943  13468999999999876543 3


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       185 ~~~~~gt~~y~aPE~~~~  202 (352)
T d1koba_         185 VKVTTATAEFAAPEIVDR  202 (352)
T ss_dssp             EEEECSSGGGCCHHHHTT
T ss_pred             eeeccCcccccCHHHHcC
Confidence            455678999999999865

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.8e-23  Score=118.48  Aligned_cols=92  Identities=24%  Similarity=0.314  Sum_probs=75.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+|+|.+++...+ ..+++..+..++.|++.|+.|+|+++++|||+++.|+++    +..+.++|+|||+++.....  
T Consensus        90 ~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill----~~~~~~Kl~DFGla~~~~~~~~  164 (285)
T d1u59a_          90 AGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL----VNRHYAKISDFGLSKALGADDS  164 (285)
T ss_dssp             CTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----EETTEEEECCCTTCEECTTCSC
T ss_pred             CCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheee----ccCCceeeccchhhhccccccc
Confidence            46799999986543 368999999999999999999999999999999999999    55668999999999876432  


Q ss_pred             ---ccceecccccccCcccccC
Q psy11820         79 ---VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ---~~~~~~~~~~~~~pe~~~~   97 (98)
                         ......+++.|+|||++.+
T Consensus       165 ~~~~~~~~~gt~~y~aPE~~~~  186 (285)
T d1u59a_         165 YYTARSAGKWPLKWYAPECINF  186 (285)
T ss_dssp             EECCCCSSCCCGGGCCHHHHHH
T ss_pred             ccccccccccCccccChHHHhC
Confidence               1123457889999998753

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.87  E-value=8.5e-23  Score=117.01  Aligned_cols=90  Identities=33%  Similarity=0.557  Sum_probs=78.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      |.+|+|.+++....  .+++..+..++.|++.|+.|||+++++|+|++|.|+++    +..+.++|+|||++...... .
T Consensus        92 ~~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill----~~~~~~kl~DFG~a~~~~~~~~  165 (277)
T d1phka_          92 MKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL----DDDMNIKLTDFGFSCQLDPGEK  165 (277)
T ss_dssp             CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCTTCEECCTTCC
T ss_pred             CCCchHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEE----cCCCCeEEccchheeEccCCCc
Confidence            46889999998755  79999999999999999999999999999999999999    67778999999999876543 3


Q ss_pred             cceecccccccCccccc
Q psy11820         80 CNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~   96 (98)
                      .....||+.|+|||.+.
T Consensus       166 ~~~~~gt~~y~~PE~~~  182 (277)
T d1phka_         166 LREVCGTPSYLAPEIIE  182 (277)
T ss_dssp             BCCCCSCGGGCCHHHHH
T ss_pred             eeeeeccCCCCCHHHhh
Confidence            34567899999999875

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=6e-22  Score=116.31  Aligned_cols=89  Identities=35%  Similarity=0.610  Sum_probs=76.0

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++...   .+++..+..++.|++.|+.|||+++++||||+|.||++    +..+.++|.|||++......  
T Consensus        92 ~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl----~~~~~~kl~DfG~a~~~~~~~~  164 (345)
T d1pmea_          92 LMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL----NTTCDLKICDFGLARVADPDHD  164 (345)
T ss_dssp             CCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEECCGGGC
T ss_pred             ecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEE----CCCCCEEEcccCceeeccCCCc
Confidence            3689999999754   59999999999999999999999999999999999999    66778999999999765322  


Q ss_pred             ---ccceecccccccCccccc
Q psy11820         79 ---VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ---~~~~~~~~~~~~~pe~~~   96 (98)
                         ......+++.|+|||++.
T Consensus       165 ~~~~~~~~~gt~~y~aPE~l~  185 (345)
T d1pmea_         165 HTGFLTEYVATRWYRAPEIML  185 (345)
T ss_dssp             BCCTTCCCCSCGGGCCGGGTT
T ss_pred             cceeeccccccceechHHHhh
Confidence               224456889999999875

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4.5e-22  Score=114.22  Aligned_cols=92  Identities=22%  Similarity=0.306  Sum_probs=70.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccc-
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-   79 (98)
                      +.++++.+++.... ..+++..+..++.|++.|+.|+|+++++|||+++.||++    +..+.+||+|||+++...... 
T Consensus        91 ~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl----~~~~~~Kl~DFGla~~~~~~~~  165 (283)
T d1mqba_          91 MENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV----NSNLVCKVSDFGLSRVLEDDPE  165 (283)
T ss_dssp             CTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECCCCC---------
T ss_pred             cccCcchhhhhccc-ccccHHHHHHHHHHHHHhhhhccccccccCccccceEEE----CCCCeEEEcccchhhcccCCCc
Confidence            35678888776543 368999999999999999999999999999999999999    777899999999997653221 


Q ss_pred             ----cceecccccccCcccccC
Q psy11820         80 ----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ----~~~~~~~~~~~~pe~~~~   97 (98)
                          .....+|+.|+|||++.+
T Consensus       166 ~~~~~~~~~gt~~Y~APE~l~~  187 (283)
T d1mqba_         166 ATYTTSGGKIPIRWTAPEAISY  187 (283)
T ss_dssp             --------CCCGGGSCHHHHHS
T ss_pred             cceEeccCCCCccccCHHHHcc
Confidence                122357889999998764

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.3e-22  Score=116.61  Aligned_cols=93  Identities=26%  Similarity=0.345  Sum_probs=72.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+|+|..++.......+++..+..++.+++.|+.|||+++++|+|+++.||++    +..+.++|+|||++......  
T Consensus        93 ~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll----~~~~~~kl~DfGla~~~~~~~~  168 (285)
T d1fmka3          93 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV----GENLVCKVADFGLARLIEDNEY  168 (285)
T ss_dssp             CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEECCCCTTC-------
T ss_pred             cCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEE----CCCCcEEEcccchhhhccCCCc
Confidence            467889988875444469999999999999999999999999999999999999    66778999999999765332  


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+++.|+|||++..
T Consensus       169 ~~~~~~~gt~~y~aPE~~~~  188 (285)
T d1fmka3         169 TARQGAKFPIKWTAPEAALY  188 (285)
T ss_dssp             -------CCGGGSCHHHHHH
T ss_pred             eeeccccccccccChHHHhC
Confidence             1233467889999998753

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.86  E-value=4.5e-22  Score=113.88  Aligned_cols=91  Identities=30%  Similarity=0.431  Sum_probs=70.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++...+  .+++..+..++.|++.|+.|+|+++++||||+|.||++    ......++.+||.+......  
T Consensus        93 ~~g~~L~~~~~~~~--~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll----~~~~~~~l~d~~~~~~~~~~~~  166 (277)
T d1o6ya_          93 VDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI----SATNAVKVMDFGIARAIADSGN  166 (277)
T ss_dssp             CCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----ETTSCEEECCCTTCEECC----
T ss_pred             CCCCEehhhhcccC--CCCHHHHHHHHHHHHHHHHHHHhCCccCccccCccccc----Cccccceeehhhhhhhhccccc
Confidence            45789999987765  79999999999999999999999999999999999999    56668999999987654321  


Q ss_pred             ---ccceecccccccCcccccC
Q psy11820         79 ---VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ---~~~~~~~~~~~~~pe~~~~   97 (98)
                         ......||+.|+|||++.+
T Consensus       167 ~~~~~~~~~Gt~~Y~aPE~~~~  188 (277)
T d1o6ya_         167 SVTQTAAVIGTAQYLSPEQARG  188 (277)
T ss_dssp             ------------TTCCHHHHTT
T ss_pred             cccccccccCcccccCHHHHcC
Confidence               2244578999999999865

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.2e-22  Score=117.07  Aligned_cols=92  Identities=25%  Similarity=0.347  Sum_probs=73.5

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++.... ..+++..+..++.|++.|+.|||+++++|||+++.||++    +..+.++|+|||++......  
T Consensus        92 ~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll----~~~~~~kl~DFGla~~~~~~~~  166 (317)
T d1xkka_          92 MPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEK  166 (317)
T ss_dssp             CTTCBHHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----EETTEEEECCCSHHHHTTTTCC
T ss_pred             ccCCcccccccccc-cCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhccee----CCCCCeEeeccccceecccccc
Confidence            46788999887653 368999999999999999999999999999999999999    55668999999998765322  


Q ss_pred             --ccceecccccccCcccccC
Q psy11820         79 --VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 --~~~~~~~~~~~~~pe~~~~   97 (98)
                        ......+|+.|+|||++.+
T Consensus       167 ~~~~~~~~gt~~y~APE~l~~  187 (317)
T d1xkka_         167 EYHAEGGKVPIKWMALESILH  187 (317)
T ss_dssp             --------CCTTTSCHHHHHH
T ss_pred             cccccccccCccccChHHHhc
Confidence              1123457899999998754

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.6e-21  Score=112.76  Aligned_cols=90  Identities=31%  Similarity=0.509  Sum_probs=73.3

Q ss_pred             hhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-ccce
Q psy11820          4 QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNT   82 (98)
Q Consensus         4 ~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~~   82 (98)
                      +++.++........+++..+..++.|++.|+.|||+++++|||++|.||++    ...+.+++.|||++...... ....
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi----~~~~~~kl~dfg~~~~~~~~~~~~~  174 (305)
T d1blxa_          99 QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV----TSSGQIKLADFGLARIYSFQMALTS  174 (305)
T ss_dssp             CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECSCCSCCCCCGGGGGCC
T ss_pred             CCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEE----cCCCCeeecchhhhhhhcccccCCC
Confidence            344444444445578999999999999999999999999999999999999    67778999999998765432 3356


Q ss_pred             ecccccccCcccccC
Q psy11820         83 YLQSRYYRAPEIILG   97 (98)
Q Consensus        83 ~~~~~~~~~pe~~~~   97 (98)
                      ..||+.|+|||++.+
T Consensus       175 ~~gT~~Y~APE~~~~  189 (305)
T d1blxa_         175 VVVTLWYRAPEVLLQ  189 (305)
T ss_dssp             CCCCCTTCCHHHHTT
T ss_pred             cccChhhcCcchhcC
Confidence            678999999999865

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=5.2e-22  Score=114.62  Aligned_cols=89  Identities=28%  Similarity=0.406  Sum_probs=71.5

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      ++++..+...  ...+++..+..++.|++.||.|||+++++|||++|.||++    +..+.++|+|||++......  ..
T Consensus        84 ~~~~~~~~~~--~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli----~~~~~~KL~DFG~a~~~~~~~~~~  157 (299)
T d1ua2a_          84 TDLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL----DENGVLKLADFGLAKSFGSPNRAY  157 (299)
T ss_dssp             EEHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECCCGGGSTTTSCCCCC
T ss_pred             chHHhhhhhc--ccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEe----cCCCccccccCccccccCCCcccc
Confidence            4444444433  2368999999999999999999999999999999999999    67778999999998765432  22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+|+.|+|||++.+
T Consensus       158 ~~~~gt~~y~aPE~~~~  174 (299)
T d1ua2a_         158 THQVVTRWYRAPELLFG  174 (299)
T ss_dssp             CCSCCCCTTCCHHHHTT
T ss_pred             cceecChhhccHHHHcc
Confidence            34578999999998753

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.85  E-value=3.5e-21  Score=110.98  Aligned_cols=95  Identities=21%  Similarity=0.326  Sum_probs=77.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCC-CCccEEEeeecCceeeccc--
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR-QPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~-~~~~~~l~~~g~~~~~~~~--   78 (98)
                      ++++|.+++.... ..++...+..++.|++.|+.|+|+++++|||++|.||++..... ..+.+++.|||++......  
T Consensus        83 ~~~~l~~~~~~~~-~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~  161 (293)
T d1csna_          83 LGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT  161 (293)
T ss_dssp             CCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred             cCCCHHHHHHhhc-cchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCcc
Confidence            5789999887654 36899999999999999999999999999999999999954322 2457999999999875421  


Q ss_pred             -------ccceecccccccCcccccC
Q psy11820         79 -------VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -------~~~~~~~~~~~~~pe~~~~   97 (98)
                             ......||+.|+|||++.+
T Consensus       162 ~~~~~~~~~~~~~GT~~y~aPE~~~~  187 (293)
T d1csna_         162 KQHIPYREKKNLSGTARYMSINTHLG  187 (293)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred             ccceeecccCceEEchhhcCHHHhcC
Confidence                   1234578999999999875

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=9.3e-22  Score=112.38  Aligned_cols=92  Identities=25%  Similarity=0.234  Sum_probs=66.7

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+|+|.+++.... ..+++..+..++.|++.|+.|+|+++++|||+++.||++    +..+.++++|||++......  
T Consensus        89 ~~~g~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll----~~~~~~Kl~DfG~a~~~~~~~~  163 (273)
T d1mp8a_          89 CTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV----SSNDCVKLGDFGLSRYMEDSTY  163 (273)
T ss_dssp             CTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----EETTEEEECC------------
T ss_pred             ccCCcHHhhhhccC-CCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheee----cCCCcEEEccchhheeccCCcc
Confidence            45789999877654 368999999999999999999999999999999999999    55668999999999765432  


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+|+.|+|||++.+
T Consensus       164 ~~~~~~~gt~~y~apE~l~~  183 (273)
T d1mp8a_         164 YKASKGKLPIKWMAPESINF  183 (273)
T ss_dssp             -------CCGGGCCHHHHHH
T ss_pred             eeccceecCcccchhhHhcc
Confidence             2234457889999998753

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.5e-21  Score=111.74  Aligned_cols=92  Identities=33%  Similarity=0.577  Sum_probs=75.9

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecc--cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--AV   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~   79 (98)
                      +++++.+++.......+++..+..++.|++.|+.|||+++++||||+|.||++    +....+++.|||.+.....  ..
T Consensus        83 ~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~----~~~~~~kl~DFG~a~~~~~~~~~  158 (298)
T d1gz8a_          83 LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAIKLADFGLARAFGVPVRT  158 (298)
T ss_dssp             CSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECSTTHHHHHCCCSBC
T ss_pred             cCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheee----cccCcceeccCCcceeccCCccc
Confidence            35667777765555579999999999999999999999999999999999999    6667899999999876543  23


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++..
T Consensus       159 ~~~~~gt~~y~apE~~~~  176 (298)
T d1gz8a_         159 YTHEVVTLWYRAPEILLG  176 (298)
T ss_dssp             TTCCBCCCTTCCHHHHTT
T ss_pred             ceeecccceeeehhhhcc
Confidence            345578999999998653

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=5.6e-21  Score=111.31  Aligned_cols=94  Identities=26%  Similarity=0.399  Sum_probs=77.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-c
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V   79 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~   79 (98)
                      +.+|+|.+++.... ..+++..+..++.|++.|+.|||+.+++||||+|.||++..  .....+++.|||++...... .
T Consensus        83 ~~gg~L~~~i~~~~-~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~--~~~~~ikl~DFG~~~~~~~~~~  159 (321)
T d1tkia_          83 ISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT--RRSSTIKIIEFGQARQLKPGDN  159 (321)
T ss_dssp             CCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS--SSCCCEEECCCTTCEECCTTCE
T ss_pred             CCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecC--CCceEEEEcccchhhccccCCc
Confidence            45789999997653 35899999999999999999999999999999999999943  13457899999999876433 2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||...+
T Consensus       160 ~~~~~~t~~y~ape~~~~  177 (321)
T d1tkia_         160 FRLLFTAPEYYAPEVHQH  177 (321)
T ss_dssp             EEEEESCGGGSCHHHHTT
T ss_pred             ccccccccccccchhccC
Confidence            345678899999998764

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.83  E-value=6.9e-21  Score=109.84  Aligned_cols=94  Identities=23%  Similarity=0.341  Sum_probs=74.7

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc---
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---   78 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---   78 (98)
                      ++++|.+.+.... ..+++..+..++.|++.|+.|+|+++++|||++|.||++... +....++++|||++......   
T Consensus        85 ~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~-~~~~~vkl~DFG~a~~~~~~~~~  162 (299)
T d1ckia_          85 LGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG-KKGNLVYIIDFGLAKKYRDARTH  162 (299)
T ss_dssp             CCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCG-GGTTCEEECCCSSCEECBCTTTC
T ss_pred             cCCchhhhhhhcc-CCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhcccccc-CCCceeeeeccCcceeccccccc
Confidence            4677877776543 369999999999999999999999999999999999998332 23446999999999876421   


Q ss_pred             ------ccceecccccccCcccccC
Q psy11820         79 ------VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ------~~~~~~~~~~~~~pe~~~~   97 (98)
                            ......||+.|+|||++.+
T Consensus       163 ~~~~~~~~~~~~gt~~y~aPE~~~~  187 (299)
T d1ckia_         163 QHIPYRENKNLTGTARYASINTHLG  187 (299)
T ss_dssp             CBCCCCBCCSCCCCSSSCCHHHHTT
T ss_pred             cceeccccCCcCCCccccCHHHHhC
Confidence                  1234578999999998865

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=6.4e-21  Score=110.31  Aligned_cols=90  Identities=22%  Similarity=0.357  Sum_probs=74.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH--------cCCcccCCCCCcEEEecCCCCCccEEEeeecCc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ--------LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA   72 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~--------~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~   72 (98)
                      |.+|+|.+++.+.   .+++.....++.+++.|+.|+|+        .+++|+|++|.||++    +..+.++|+|||++
T Consensus        83 ~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl----~~~~~~Kl~DFGl~  155 (303)
T d1vjya_          83 HEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV----KKNGTCCIADLGLA  155 (303)
T ss_dssp             CTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEE----CTTSCEEECCCTTC
T ss_pred             ccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEE----cCCCCeEEEecCcc
Confidence            4588999999875   48899999999999999999996        589999999999999    67779999999998


Q ss_pred             eeeccc------ccceecccccccCcccccC
Q psy11820         73 SHVSKA------VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        73 ~~~~~~------~~~~~~~~~~~~~pe~~~~   97 (98)
                      ......      ......||+.|+|||++.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  186 (303)
T d1vjya_         156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDD  186 (303)
T ss_dssp             EEEETTTTEECC----CCSCGGGCCHHHHTT
T ss_pred             ccccCCCcceeccccceecccCcCChhhccc
Confidence            866432      1234568999999998754

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=8.7e-21  Score=109.55  Aligned_cols=93  Identities=23%  Similarity=0.286  Sum_probs=76.6

Q ss_pred             CcchhHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEE
Q psy11820          1 MLEQNLYDFLKQNK--------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKV   66 (98)
Q Consensus         1 ~~~~~L~~~~~~~~--------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l   66 (98)
                      +.+|+|.+++....              ...+++..+..++.|++.|+.|+|+.+++||||++.|+++    +..+.+++
T Consensus       101 ~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl----~~~~~~kl  176 (299)
T d1fgka_         101 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV----TEDNVMKI  176 (299)
T ss_dssp             CTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTCCEEE
T ss_pred             cCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceee----cCCCCeEe
Confidence            45789999997543              2358999999999999999999999999999999999999    66778999


Q ss_pred             eeecCceeecccc----cceecccccccCcccccC
Q psy11820         67 IDFGSASHVSKAV----CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        67 ~~~g~~~~~~~~~----~~~~~~~~~~~~pe~~~~   97 (98)
                      +|||++.......    .....+++.|+|||++.+
T Consensus       177 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~  211 (299)
T d1fgka_         177 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD  211 (299)
T ss_dssp             CSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHH
T ss_pred             ccchhhccccccccccccccCCCChhhhhhhHhcC
Confidence            9999988664321    233467888999998753

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.83  E-value=3.8e-21  Score=111.11  Aligned_cols=93  Identities=25%  Similarity=0.303  Sum_probs=73.2

Q ss_pred             CcchhHHHHHhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCC
Q psy11820          1 MLEQNLYDFLKQNK----------------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV   58 (98)
Q Consensus         1 ~~~~~L~~~~~~~~----------------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~   58 (98)
                      +.+|+|.+++....                      ...+++..+..++.|++.|++|+|+.+++|||+++.||++    
T Consensus        98 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILl----  173 (301)
T d1lufa_          98 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV----  173 (301)
T ss_dssp             CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----
T ss_pred             cCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEE----
Confidence            45788999886432                      1247888999999999999999999999999999999999    


Q ss_pred             CCCccEEEeeecCceeeccc----ccceecccccccCcccccC
Q psy11820         59 RQPYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        59 ~~~~~~~l~~~g~~~~~~~~----~~~~~~~~~~~~~pe~~~~   97 (98)
                      +..+.++|+|||++......    ...+..+++.|+|||++.+
T Consensus       174 d~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  216 (301)
T d1lufa_         174 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY  216 (301)
T ss_dssp             CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH
T ss_pred             CCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHcc
Confidence            66778999999998754322    2234567789999998753

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=6.6e-21  Score=108.17  Aligned_cols=92  Identities=21%  Similarity=0.290  Sum_probs=75.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+|+|.+++.... ..+++..+..++.|++.|+.|||+++++|+|+++.|+++    +..+.++|+|||++......  
T Consensus        81 ~~~g~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill----~~~~~~kl~DfG~a~~~~~~~~  155 (258)
T d1k2pa_          81 MANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV----NDQGVVKVSDFGLSRYVLDDEY  155 (258)
T ss_dssp             CTTEEHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEE----CTTCCEEECCCSSCCBCSSSSC
T ss_pred             cCCCcHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEE----cCCCcEEECcchhheeccCCCc
Confidence            35789999876543 258899999999999999999999999999999999999    66778999999999765432  


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ......+++.|+|||++.+
T Consensus       156 ~~~~~~~~t~~y~aPE~~~~  175 (258)
T d1k2pa_         156 TSSVGSKFPVRWSPPEVLMY  175 (258)
T ss_dssp             CCCCCSCCCGGGCCHHHHHH
T ss_pred             eeecccCCCCCcCCcHHhcC
Confidence             1223457889999998753

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.7e-20  Score=110.00  Aligned_cols=88  Identities=33%  Similarity=0.604  Sum_probs=74.8

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeecccccc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      ++.+|.++....   .+++..+..++.|++.|+.|||+++++|||++|.||++    +..+.+++.|||.+...... ..
T Consensus       105 ~~~~l~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~----~~~~~~kl~Dfg~a~~~~~~-~~  176 (346)
T d1cm8a_         105 MGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV----NEDCELKILDFGLARQADSE-MT  176 (346)
T ss_dssp             CSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEECCSS-CC
T ss_pred             ccccHHHHHHhc---cccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhc----ccccccccccccceeccCCc-cc
Confidence            356777777653   59999999999999999999999999999999999999    77778999999999876443 24


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...+++.|+|||++.+
T Consensus       177 ~~~~t~~y~aPE~~~~  192 (346)
T d1cm8a_         177 GYVVTRWYRAPEVILN  192 (346)
T ss_dssp             SSCSCGGGCCTHHHHT
T ss_pred             cccccccccCHHHHcC
Confidence            5578899999998764

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.5e-21  Score=110.16  Aligned_cols=92  Identities=25%  Similarity=0.294  Sum_probs=70.6

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+|+|.+++.......+++..+..++.|++.|+.|||+.+++|+|+++.|+++    +..+.+++.|||++...... .
T Consensus        83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~----~~~~~~kl~dfg~s~~~~~~-~  157 (262)
T d1byga_          83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV----SEDNVAKVSDFGLTKEASST-Q  157 (262)
T ss_dssp             CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTSCEEECCCCC---------
T ss_pred             cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhhee----cCCCCEeecccccceecCCC-C
Confidence            468999999975433358999999999999999999999999999999999999    67778999999998765432 2


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....++..|+|||++.+
T Consensus       158 ~~~~~~~~y~aPE~l~~  174 (262)
T d1byga_         158 DTGKLPVKWTAPEALRE  174 (262)
T ss_dssp             ----CCTTTSCHHHHHH
T ss_pred             ccccccccCCChHHHhC
Confidence            34457788999998753

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.7e-20  Score=110.06  Aligned_cols=89  Identities=31%  Similarity=0.609  Sum_probs=72.3

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccccc
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC   80 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~   80 (98)
                      +.+|+|.+++...   .+++..+..++.|++.||.|||+++++|||+++.||++    +..+.+++.|||.+...... .
T Consensus       104 ~~gg~L~~~~~~~---~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi----~~~~~~kl~dfg~a~~~~~~-~  175 (348)
T d2gfsa1         104 LMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV----NEDCELKILDFGLARHTDDE-M  175 (348)
T ss_dssp             CCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECCC----CCTGG-G
T ss_pred             ecCCchhhhcccc---cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccc----cccccccccccchhcccCcc-c
Confidence            3588999999643   59999999999999999999999999999999999999    67778999999998765432 2


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      .+..+++.|+|||+..+
T Consensus       176 ~~~~g~~~y~apE~~~~  192 (348)
T d2gfsa1         176 TGYVATRWYRAPEIMLN  192 (348)
T ss_dssp             SSSCHHHHTSCHHHHTT
T ss_pred             ccccccccccCchhhcC
Confidence            45568889999998654

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.3e-20  Score=107.73  Aligned_cols=92  Identities=23%  Similarity=0.238  Sum_probs=71.9

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++.... ..+++..+..++.|++.|+.|||+++++|+||++.||++    +....++++|||++......  
T Consensus        92 ~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll----~~~~~vkl~DfGl~~~~~~~~~  166 (273)
T d1u46a_          92 APLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL----ATRDLVKIGDFGLMRALPQNDD  166 (273)
T ss_dssp             CTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----EETTEEEECCCTTCEECCC-CC
T ss_pred             ecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhcc----ccccceeeccchhhhhcccCCC
Confidence            35778888776542 359999999999999999999999999999999999999    45568999999999875332  


Q ss_pred             ---ccceecccccccCcccccC
Q psy11820         79 ---VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 ---~~~~~~~~~~~~~pe~~~~   97 (98)
                         ......++..|+|||++.+
T Consensus       167 ~~~~~~~~~~~~~~~aPE~~~~  188 (273)
T d1u46a_         167 HYVMQEHRKVPFAWCAPESLKT  188 (273)
T ss_dssp             EEEC-----CCGGGCCHHHHHH
T ss_pred             cceecCccccCcccCCHHHHhC
Confidence               1123356778999998754

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.1e-20  Score=108.33  Aligned_cols=93  Identities=25%  Similarity=0.245  Sum_probs=74.5

Q ss_pred             CcchhHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEE
Q psy11820          1 MLEQNLYDFLKQN--------------KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKV   66 (98)
Q Consensus         1 ~~~~~L~~~~~~~--------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l   66 (98)
                      +.+|+|.+++...              ....+++..+..++.|++.|+.|+|+.+++|||+++.|+++    +..+.++|
T Consensus        93 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~----~~~~~~kl  168 (309)
T d1fvra_          93 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV----GENYVAKI  168 (309)
T ss_dssp             CTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CGGGCEEE
T ss_pred             cCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEE----cCCCceEE
Confidence            4679999998643              23468999999999999999999999999999999999999    66778999


Q ss_pred             eeecCceeeccc-ccceecccccccCcccccC
Q psy11820         67 IDFGSASHVSKA-VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        67 ~~~g~~~~~~~~-~~~~~~~~~~~~~pe~~~~   97 (98)
                      +|||++...... ......++..|+|||.+.+
T Consensus       169 ~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~  200 (309)
T d1fvra_         169 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY  200 (309)
T ss_dssp             CCTTCEESSCEECCC----CCTTTCCHHHHHH
T ss_pred             ccccccccccccccccceecCCcccchHHhcc
Confidence            999998765432 2234467889999998753

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=5.5e-20  Score=107.14  Aligned_cols=91  Identities=26%  Similarity=0.411  Sum_probs=77.1

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++....  .+++..+..++.|++.|+.|+|+.+++|||++|.|+++    +..+.++|.|||++......  
T Consensus       111 ~~~~~L~~~i~~~~--~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill----~~~~~vkL~DFG~a~~~~~~~~  184 (322)
T d1vzoa_         111 INGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL----DSNGHVVLTDFGLSKEFVADET  184 (322)
T ss_dssp             CCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEESCSSEEEECCGGGG
T ss_pred             ccccHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceee----cCCCCEEEeeccchhhhccccc
Confidence            46799999998765  67889999999999999999999999999999999999    66778999999998765322  


Q ss_pred             -ccceecccccccCcccccC
Q psy11820         79 -VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        79 -~~~~~~~~~~~~~pe~~~~   97 (98)
                       ...+..+++.|++||.+.+
T Consensus       185 ~~~~~~~g~~~~~~pe~~~~  204 (322)
T d1vzoa_         185 ERAYDFCGTIEYMAPDIVRG  204 (322)
T ss_dssp             GGGCGGGSCCTTCCHHHHTT
T ss_pred             ccccccccccccchhHHhhc
Confidence             2345568899999998754

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.8e-20  Score=107.32  Aligned_cols=92  Identities=27%  Similarity=0.331  Sum_probs=74.9

Q ss_pred             CcchhHHHHHhhCC----------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccE
Q psy11820          1 MLEQNLYDFLKQNK----------------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV   64 (98)
Q Consensus         1 ~~~~~L~~~~~~~~----------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~   64 (98)
                      +.+|+|.+++....                ...+++..+..++.|++.|+.|||+++++|||+++.||++    +..+.+
T Consensus       109 ~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~----~~~~~~  184 (311)
T d1t46a_         109 CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL----THGRIT  184 (311)
T ss_dssp             CTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----ETTTEE
T ss_pred             CCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccc----cccCcc
Confidence            45789999987543                2258899999999999999999999999999999999999    566789


Q ss_pred             EEeeecCceeeccc----ccceecccccccCccccc
Q psy11820         65 KVIDFGSASHVSKA----VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        65 ~l~~~g~~~~~~~~----~~~~~~~~~~~~~pe~~~   96 (98)
                      +++|||.+......    ......+++.|+|||++.
T Consensus       185 ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  220 (311)
T d1t46a_         185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF  220 (311)
T ss_dssp             EECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH
T ss_pred             cccccchheeccCCCcceEeeecccChHHcCHHHhc
Confidence            99999998765422    112346789999999875

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.80  E-value=4e-20  Score=106.07  Aligned_cols=89  Identities=22%  Similarity=0.373  Sum_probs=68.4

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--cc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VC   80 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~   80 (98)
                      ++.+..+....  ..+++..+..++.|++.||+|||+.+|+|||++|.||++    ...+.+++.|||.+......  ..
T Consensus        84 ~~~~~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll----~~~~~~kl~DfG~a~~~~~~~~~~  157 (286)
T d1ob3a_          84 QDLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI----NREGELKIADFGLARAFGIPVRKY  157 (286)
T ss_dssp             EEHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECCTTHHHHHCC-----
T ss_pred             hhhHHHHHhhc--CCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeE----cCCCCEEecccccceecccCcccc
Confidence            34444444433  379999999999999999999999999999999999999    66778999999998765432  22


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+++.|++||.+.+
T Consensus       158 ~~~~~~~~y~~pE~~~~  174 (286)
T d1ob3a_         158 THEIVTLWYRAPDVLMG  174 (286)
T ss_dssp             ----CCCTTCCHHHHTT
T ss_pred             ceecccchhhhHHHHhC
Confidence            34467889999998764

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=8.8e-20  Score=105.89  Aligned_cols=78  Identities=27%  Similarity=0.510  Sum_probs=66.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc------ccceecccccc
Q psy11820         16 SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA------VCNTYLQSRYY   89 (98)
Q Consensus        16 ~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~------~~~~~~~~~~~   89 (98)
                      ..+++..+..++.|++.|+.|||+++++|||++++||++    ...+.+++.|||++......      ......+|+.|
T Consensus       112 ~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl----~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y  187 (318)
T d3blha1         112 VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI----TRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWY  187 (318)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGG
T ss_pred             cccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheee----cCCCcEEeeecceeeecccccccccccccceecCHHH
Confidence            368899999999999999999999999999999999999    66778999999999765321      22345689999


Q ss_pred             cCcccccC
Q psy11820         90 RAPEIILG   97 (98)
Q Consensus        90 ~~pe~~~~   97 (98)
                      +|||++.+
T Consensus       188 ~aPE~~~~  195 (318)
T d3blha1         188 RPPELLLG  195 (318)
T ss_dssp             CCHHHHTT
T ss_pred             hhHHHHcC
Confidence            99998764

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.80  E-value=2.1e-20  Score=108.92  Aligned_cols=88  Identities=26%  Similarity=0.492  Sum_probs=70.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-cc
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC   80 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~   80 (98)
                      .+++|.++.     ..+++..+..++.|++.||.|||+++|+|||++|.||++..   ....++++|||++...... ..
T Consensus       115 ~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~---~~~~vkl~DFG~a~~~~~~~~~  186 (328)
T d3bqca1         115 NNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH---EHRKLRLIDWGLAEFYHPGQEY  186 (328)
T ss_dssp             CSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET---TTTEEEECCGGGCEECCTTCCC
T ss_pred             CCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcC---CCCeeeecccccceeccCCCcc
Confidence            345555442     26899999999999999999999999999999999999932   2336899999999876432 33


Q ss_pred             ceecccccccCcccccC
Q psy11820         81 NTYLQSRYYRAPEIILG   97 (98)
Q Consensus        81 ~~~~~~~~~~~pe~~~~   97 (98)
                      ....+|+.|+|||++.+
T Consensus       187 ~~~~~t~~y~aPE~~~~  203 (328)
T d3bqca1         187 NVRVASRYFKGPELLVD  203 (328)
T ss_dssp             CSCCSCGGGCCHHHHTT
T ss_pred             cccccCccccCcccccC
Confidence            45568899999999764

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.2e-19  Score=106.57  Aligned_cols=78  Identities=37%  Similarity=0.736  Sum_probs=66.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCC-ccEEEeeecCceeeccc-ccceecccccccCcc
Q psy11820         16 SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP-YRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPE   93 (98)
Q Consensus        16 ~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~-~~~~l~~~g~~~~~~~~-~~~~~~~~~~~~~pe   93 (98)
                      ..+++..++.++.|++.||.|||+++|+||||++.||++    +.. ..++|+|||++...... ...+..+++.|+|||
T Consensus       117 ~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl----~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE  192 (350)
T d1q5ka_         117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL----DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE  192 (350)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE----CTTTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEE----ecCCCceeEecccchhhccCCcccccccccccccChH
Confidence            369999999999999999999999999999999999999    443 47899999998876432 334567889999999


Q ss_pred             cccC
Q psy11820         94 IILG   97 (98)
Q Consensus        94 ~~~~   97 (98)
                      .+.+
T Consensus       193 ~~~~  196 (350)
T d1q5ka_         193 LIFG  196 (350)
T ss_dssp             HHTT
T ss_pred             Hhhc
Confidence            8764

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.5e-19  Score=104.75  Aligned_cols=93  Identities=20%  Similarity=0.354  Sum_probs=74.6

Q ss_pred             CcchhHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCc
Q psy11820          1 MLEQNLYDFLKQNK--------FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA   72 (98)
Q Consensus         1 ~~~~~L~~~~~~~~--------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~   72 (98)
                      +.+|+|.+++....        ...++...+..++.+++.|+.|||+++++|+|+++.||++    +....++|+|||++
T Consensus       105 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLl----d~~~~~Kl~DFGla  180 (308)
T d1p4oa_         105 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMT  180 (308)
T ss_dssp             CTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE----CTTCCEEECCTTCC
T ss_pred             cCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceee----cCCceEEEeecccc
Confidence            46889999876431        1246788899999999999999999999999999999999    77779999999999


Q ss_pred             eeeccc----ccceecccccccCcccccC
Q psy11820         73 SHVSKA----VCNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        73 ~~~~~~----~~~~~~~~~~~~~pe~~~~   97 (98)
                      +.....    ......+++.|+|||.+.+
T Consensus       181 ~~~~~~~~~~~~~~~~~t~~y~aPe~l~~  209 (308)
T d1p4oa_         181 RDIYETDYYRKGGKGLLPVRWMSPESLKD  209 (308)
T ss_dssp             CGGGGGGCEEGGGSSEECGGGCCHHHHHH
T ss_pred             eeccCCcceeeccceecccccCCHHHHcc
Confidence            765432    1233457899999998753

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.4e-19  Score=105.01  Aligned_cols=91  Identities=24%  Similarity=0.268  Sum_probs=74.4

Q ss_pred             CcchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--
Q psy11820          1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--   78 (98)
Q Consensus         1 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--   78 (98)
                      +.+++|.+++.... ..+++..+..++.|++.|+.|+|+.+++|||+++.||++    +....++|+|||+++.....  
T Consensus       111 ~~~g~l~~~~~~~~-~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl----~~~~~~kL~DFG~~~~~~~~~~  185 (311)
T d1r0pa_         111 MKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEF  185 (311)
T ss_dssp             CTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTCCEEECSSGGGCCTTTTTC
T ss_pred             eecCchhhhhcccc-ccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeE----CCCCCEEEecccchhhcccccc
Confidence            46789999887543 357788889999999999999999999999999999999    66778999999999765322  


Q ss_pred             ----ccceecccccccCccccc
Q psy11820         79 ----VCNTYLQSRYYRAPEIIL   96 (98)
Q Consensus        79 ----~~~~~~~~~~~~~pe~~~   96 (98)
                          ......+++.|+|||.+.
T Consensus       186 ~~~~~~~~~~gt~~y~aPE~~~  207 (311)
T d1r0pa_         186 DSVHNKTGAKLPVKWMALESLQ  207 (311)
T ss_dssp             CCTTCTTCSSCCGGGSCHHHHH
T ss_pred             ccceecccccccccccChHHHh
Confidence                112345788999999865

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=6.6e-19  Score=101.00  Aligned_cols=90  Identities=23%  Similarity=0.397  Sum_probs=73.1

Q ss_pred             cchhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc--c
Q psy11820          2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V   79 (98)
Q Consensus         2 ~~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~   79 (98)
                      .+++|..+....+  .+++..+..++.|++.|+.|+|+++++|||++|.||++    .....+++.|||.+......  .
T Consensus        84 ~~~~l~~~~~~~~--~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli----~~~~~~kl~DFG~a~~~~~~~~~  157 (292)
T d1unla_          84 DQDLKKYFDSCNG--DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI----NRNGELKLANFGLARAFGIPVRC  157 (292)
T ss_dssp             SEEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECCSCCSC
T ss_pred             ccccccccccccc--ccchhHHHHHHHHHHHHHHHhhcCCEeeecccCccccc----ccCCceeeeecchhhcccCCCcc
Confidence            4667777776544  78899999999999999999999999999999999999    66668999999999876432  2


Q ss_pred             cceecccccccCcccccC
Q psy11820         80 CNTYLQSRYYRAPEIILG   97 (98)
Q Consensus        80 ~~~~~~~~~~~~pe~~~~   97 (98)
                      .....+++.|+|||++.+
T Consensus       158 ~~~~~~~~~~~~pe~~~~  175 (292)
T d1unla_         158 YSAEVVTLWYRPPDVLFG  175 (292)
T ss_dssp             CCSCCSCGGGCCHHHHTT
T ss_pred             ceeeccccchhhhhHhcc
Confidence            233456678999998754

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=3.4e-18  Score=100.56  Aligned_cols=87  Identities=37%  Similarity=0.690  Sum_probs=63.8

Q ss_pred             chhHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeeccc-ccc
Q psy11820          3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCN   81 (98)
Q Consensus         3 ~~~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~   81 (98)
                      ++++.+.+.    ..+++..++.++.|++.|+.|||+.+++|+|++|.|+++    ...+..++.|||++...... ...
T Consensus       105 ~~~l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~----~~~~~~kl~df~~~~~~~~~~~~~  176 (355)
T d2b1pa1         105 DANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAGTSFMMT  176 (355)
T ss_dssp             SEEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECCCCC-----------
T ss_pred             chHHHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccc----ccccceeeechhhhhccccccccc
Confidence            445555553    258999999999999999999999999999999999999    66678999999988765433 234


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...+|+.|+|||++.+
T Consensus       177 ~~~~t~~y~aPE~l~~  192 (355)
T d2b1pa1         177 PYVVTRYYRAPEVILG  192 (355)
T ss_dssp             ----CCTTCCHHHHTT
T ss_pred             cccccccccChhhhcC
Confidence            5568899999999875

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.67  E-value=6.5e-17  Score=94.97  Aligned_cols=92  Identities=33%  Similarity=0.607  Sum_probs=70.1

Q ss_pred             hHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEecCCCC--CccEEEeeecCceeecccccc
Q psy11820          5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQ--PYRVKVIDFGSASHVSKAVCN   81 (98)
Q Consensus         5 ~L~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~h~~l~~~~~~~~~~~~~--~~~~~l~~~g~~~~~~~~~~~   81 (98)
                      +............+++..+..++.|++.|+.|+|+ .+|+|||+++.||++...+..  ...+++.|||.+...... ..
T Consensus       109 ~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~-~~  187 (362)
T d1q8ya_         109 NLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH-YT  187 (362)
T ss_dssp             EHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC-CC
T ss_pred             ccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecccccccccc-cc
Confidence            33444444445578999999999999999999998 889999999999999543221  235899999998765432 24


Q ss_pred             eecccccccCcccccC
Q psy11820         82 TYLQSRYYRAPEIILG   97 (98)
Q Consensus        82 ~~~~~~~~~~pe~~~~   97 (98)
                      ...+++.|+|||++.+
T Consensus       188 ~~~gt~~y~aPE~~~~  203 (362)
T d1q8ya_         188 NSIQTREYRSPEVLLG  203 (362)
T ss_dssp             SCCSCGGGCCHHHHHT
T ss_pred             cccccccccChhhccc
Confidence            5568899999998764

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.36  E-value=4.4e-13  Score=72.56  Aligned_cols=54  Identities=22%  Similarity=0.433  Sum_probs=46.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEecCCCCCccEEEeeecCceeec
Q psy11820         18 LPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS   76 (98)
Q Consensus        18 l~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~~   76 (98)
                      ++...+..++.|++.++.|+|+++++|+|++|.|+++.    . ..+++.|||.+....
T Consensus       100 l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~----~-~~~~liDFG~a~~~~  153 (191)
T d1zara2         100 VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS----E-EGIWIIDFPQSVEVG  153 (191)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE----T-TEEEECCCTTCEETT
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeee----C-CCEEEEECCCcccCC
Confidence            45566778899999999999999999999999999994    2 248899999987654

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.08  E-value=0.0074  Score=33.94  Aligned_cols=31  Identities=35%  Similarity=0.447  Sum_probs=25.2

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .+++|+|+.+.|+++    +......+.||+.+..
T Consensus       183 ~giIHgDl~~dNvl~----~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         183 AGVIHADLFQDNVFF----LGDELSGLIDFYFACN  213 (316)
T ss_dssp             EEEECSCCCGGGEEE----ETTEEEEECCCTTCEE
T ss_pred             cccccCCcchhhhhc----ccccceeEeccccccc
Confidence            568999999999999    4445678999997643

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.32  E-value=0.042  Score=29.73  Aligned_cols=30  Identities=27%  Similarity=0.410  Sum_probs=23.7

Q ss_pred             CCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         41 GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        41 ~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .++|+|+.+.|+++    .......+.||+.+..
T Consensus       184 ~l~HgD~~~~Nil~----~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         184 VFSHGDLGDSNIFV----KDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             EEECSCCCTTSEEE----ETTEEEEECCCTTCEE
T ss_pred             EEEEeeccCcceee----cCCceEEEeechhccc
Confidence            37899999999999    4444567999987754

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=91.54  E-value=0.042  Score=29.58  Aligned_cols=30  Identities=27%  Similarity=0.226  Sum_probs=23.7

Q ss_pred             CCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         41 GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        41 ~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .++|+|+.+.|+++    .....+.+.||+.+..
T Consensus       176 ~liHgD~~~~Nvl~----~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         176 VVTHGDACLPNIMV----ENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             EEECSSCCGGGEEE----ETTEEEEECCCTTCEE
T ss_pred             eEEeCCCCCcceEE----eCCceEEEEEchhccc
Confidence            37999999999999    4444567999987654

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=88.23  E-value=1  Score=25.20  Aligned_cols=29  Identities=24%  Similarity=0.374  Sum_probs=21.7

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      .+++|+|+.+.|+++    +..  ..+.||+-+..
T Consensus       192 ~~liHgDlh~~NvL~----~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         192 VLRLHGDCHAGNILW----RDG--PMFVDLDDARN  220 (325)
T ss_dssp             CEECCSSCSGGGEEE----SSS--EEECCCTTCCE
T ss_pred             ceeecCCCCcccEEE----eCC--ceEEechhccc
Confidence            357999999999998    322  35789986643

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=82.60  E-value=0.38  Score=27.89  Aligned_cols=30  Identities=37%  Similarity=0.320  Sum_probs=23.5

Q ss_pred             cCCcccCCCCCcEEEecCCCCCccEEEeeecCcee
Q psy11820         40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH   74 (98)
Q Consensus        40 ~~~~h~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~   74 (98)
                      ..++|+|+.+.|+++.    . ..+.+.|+..+..
T Consensus       223 ~~LiHGDl~~gNIlv~----~-~~~~vID~E~a~~  252 (392)
T d2pula1         223 ETLIHGDLHTGSIFAS----E-HETKVIDPEFAFY  252 (392)
T ss_dssp             CEEECSCCCGGGEEEC----S-SCEEECCCTTCEE
T ss_pred             cceeccCCcCCceeEc----C-CceEEechhhccc
Confidence            3589999999999983    2 2478999987654