Diaphorina citri psyllid: psy11868

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370----
VRVFSFLSGKLTRVYDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATMLGVKFVNIVTNQCVRFIGKPENLRLLHLSLFQGKVKTRKAATTLEMEAAKNPTLEAIQPDPTLFCTGFNKNRFYLFSRREPADIKSPETDRDVFNEKPSKEDIISATEASGEQVLYDSAIIHTSMGDIHLQLFKECAKTVENFCVHSKNNYYNGHIFHRVIKGFMIQTGDPTGTGTGGQSIWGGEFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPYDDIQVISISVK
cEEEEEEcccEEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEccHHHHHHHHHHHcccccccccHHHHHHHHHcccccccccccEEEcccccEEEEEEEcEEEEEEEEEcEEEEEccccccccccHHHcccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccEEccEEEEEEccEEEEEEEcccccHHHHHHHHHHccccccccEEEEcccccEEEcccccccccccccccccccccccccccccccccEEEEcccccccccccEEEEccccccccccccEEEEEEccHHHHHHHHccccccccccccccEEEEEEEEc
VRVFSFLSGKLTRVYDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADL*****QLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATMLGVKFVNIVTNQCVRFIGKPENLRLLHLSLFQGKVKTRKAATTL*********LEAIQPDPTLFCTGFNKNRFYLFS****************FNEK***************QVLYDSAIIHTSMGDIHLQLFKECAKTVENFCVHSKNNYYNGHIFHRVIKGFMIQTGDPTGTGTGGQSIWGGEFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPYDDIQVISISVK
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VRVFSFLSGKLTRVYDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATMLGVKFVNIVTNQCVRFIGKPENLRLLHLSLFQGKVKTRKAATTLEMEAAKNPTLEAIQPDPTLFCTGFNKNRFYLFSRREPADIKSPETDRDVFNEKPSKEDIISATEASGEQVLYDSAIIHTSMGDIHLQLFKECAKTVENFCVHSKNNYYNGHIFHRVIKGFMIQTGDPTGTGTGGQSIWGGEFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPYDDIQVISISVK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Peptidylprolyl isomerase domain and WD repeat-containing protein 1 Putative peptidylprolyl isomerase (PPIase). PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. May be involved in pre-mRNA splicing.confidentQ96BP3
Peptidylprolyl isomerase domain and WD repeat-containing protein 1 Putative peptidylprolyl isomerase (PPIase). PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. May be involved in pre-mRNA splicing.confidentQ29RZ2
Peptidylprolyl isomerase domain and WD repeat-containing protein 1 Putative peptidylprolyl isomerase (PPIase). PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. May be involved in pre-mRNA splicing.confidentQ8CEC6

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0006457 [BP]protein foldingprobableGO:0044267, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0044237, GO:0043170, GO:0071704, GO:0008150, GO:0008152
GO:0071011 [CC]precatalytic spliceosomeprobableGO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0030529, GO:0044446, GO:0043229, GO:0044428, GO:0044422, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0005681
GO:0044763 [BP]single-organism cellular processprobableGO:0009987, GO:0008150, GO:0044699
GO:0070013 [CC]intracellular organelle lumenprobableGO:0005575, GO:0043233, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0043229, GO:0005623, GO:0044424, GO:0043226, GO:0044422
GO:0043234 [CC]protein complexprobableGO:0005575, GO:0032991
GO:0043232 [CC]intracellular non-membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0050794 [BP]regulation of cellular processprobableGO:0008150, GO:0065007, GO:0050789
GO:0042393 [MF]histone bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0000413 [BP]protein peptidyl-prolyl isomerizationprobableGO:0044267, GO:0018208, GO:0044260, GO:0044238, GO:0019538, GO:0044237, GO:0009987, GO:0006464, GO:0043170, GO:0071704, GO:0043412, GO:0036211, GO:0008150, GO:0018193, GO:0008152
GO:0031090 [CC]organelle membraneprobableGO:0005575, GO:0016020, GO:0043227, GO:0043226, GO:0044422
GO:0016018 [MF]cyclosporin A bindingprobableGO:0033218, GO:0003674, GO:0042277, GO:0005488, GO:0008144
GO:0005783 [CC]endoplasmic reticulumprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0003755 [MF]peptidyl-prolyl cis-trans isomerase activityprobableGO:0003824, GO:0003674, GO:0016853, GO:0016859
GO:0005740 [CC]mitochondrial envelopeprobableGO:0031967, GO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005739, GO:0031975, GO:0044446, GO:0044444, GO:0044429, GO:0005575, GO:0044424, GO:0005623, GO:0005622, GO:0043227, GO:0043226, GO:0044422
GO:0009507 [CC]chloroplastprobableGO:0005737, GO:0009536, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0005794 [CC]Golgi apparatusprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0003682 [MF]chromatin bindingprobableGO:0003674, GO:0005488
GO:0005576 [CC]extracellular regionprobableGO:0005575
GO:0071013 [CC]catalytic step 2 spliceosomeprobableGO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0030529, GO:0044446, GO:0043229, GO:0044428, GO:0044422, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0005681
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
5.-.-.-Isomerases.probable
5.2.-.-Cis-trans-isomerases.probable
5.2.1.-Cis-trans Isomerases.probable
5.2.1.8Peptidylprolyl isomerase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2A2N, chain A
Confidence level:very confident
Coverage over the Query: 212-374
View the alignment between query and template
View the model in PyMOL
Template: 3VL1, chain A
Confidence level:probable
Coverage over the Query: 15-49,82-184
View the alignment between query and template
View the model in PyMOL
Template: 3F3F, chain A
Confidence level:probable
Coverage over the Query: 15-42,76-122
View the alignment between query and template
View the model in PyMOL