Diaphorina citri psyllid: psy11884

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640----

MKRGPWNRRIRGATGKSGYSALLMSVSKFSVETEIDRKIGLYAPYVSKRFRNYGHFPKIQINVHANSQSYVFFYEESDGLTYSSIRQTAKELQRFRNYGQFRLFDTKIAISSCNVTKKCFYSIQTSPQGSVGSGLMKTLVLQKVLTMILSLKAVIRVPPRLFSSFKYGALQLNRFHLVNPQPLIYLRHSAHFHTSPSLSNLKRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGATSEQMSAAGASRSTTAEDYMHRWNFKSSVDPEELFRKIFGDTGFDFKVTEEEFIANKYGFGSSQEVILKIDKCLQQVPVDLQLQRTTCIGGISITEEEFIANKYGFGSSQEVILKIDFETAARGGYKEVDVNVIDICPKCRGTRCELGTKSVRCTYCQGSGYETTTTGPFIMKTTCRYCSGSGIYIKFPCQNCDGMGQNIQRRTVSIPIPQGIEDGQTIRFPIGQDQIFVTFQVIPSSRYHRDQSDIHTEESISISQAILGGTINVEGIYGDTLSVEIQPGTSSHTKIKIPYKGLKNRNSSGYGHHFVHVKIEVPRYPSEKQKDLVREFFSVEPNTNGNKDDSNQALSGYRDIFLFFSRLIDFIKSFLSSFKK

ccccccccccccccccccccEEEEEEccEEEEEEEEcccccccccHHHccccccccccEEEEEECcccEEEEEEEccccccHHHHHHHHHHHHHHHccccEEEEEEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccCCccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccHHHHHHccccccccccHHHHHHHccccccccccccccccccccccccHHHHHcccccccccCEEEEEEEHEEcccccEEEEEccccccccccccccccccccccccccccccCEEEEECccEEEEEcccccccCEEEEccccccccccCEEEEEEEEEEccccccccccEEEcccccccEEEEEEEccccccEECcccEEEEEEccHHHHccccEEEEccccccEEEEEEccccccccEEEEcccccccccccccccEEEEEEEEccccccHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHccc

**********RGATGKSGYSALLMSVSKFSVETEIDRKIGLYAPYVSKRFRNYGHFPKIQINVHANSQSYVFFYEESDGLTYSSIRQTAKELQRFRNYGQFRLFDTKIAISSCNVTKKCFYSIQTSPQGSVGSGLMKTLVLQKVLTMILSLKAVIRVPPRLFSSFKYGALQLNRFHLVNPQPLIYLRHSAHFHTSPSLSNLKRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGATSE*************EDYMHRWNFKSSVDPEELFRKIFGDTGFDFKVTEEEFIANKYGFGSSQEVILKIDKCLQQVPVDLQLQRTTCIGGISITEEEFIANKYGFGSSQEVILKIDFETAARGGYKEVDVNVIDICPKCRGTR**L*TKSVRCTYCQGSGYETTTTGPFIMKTTCRYCSGSGIYIKFPCQNCDGMGQNIQRRTVSIPIPQGIEDGQTIRFPIGQDQIFVTFQVIPSSRYHRDQSDIHTEESISISQAILGGTINVEGIYGDTLSVEIQPGTSSHTKIKIPYKGLKNRNSSGYGHHFVHVKIEVPRYPSEKQKDLVRE*******************SGYRDIFLFFSRLIDFIKSFLSSF**

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
DnaJ homolog subfamily A member 3, mitochondrial	Modulates apoptotic signal transduction or effector structures within the mitochondrial matrix. Affect cytochrome C release from the mitochondria and caspase 3 activation, but not caspase 8 activation. Isoform 1 increases apoptosis triggered by both TNF and the DNA-damaging agent mytomycin C; in sharp contrast, isoform 2 suppresses apoptosis. Can modulate IFN-gamma-mediated transcriptional activity (By similarity). Isoform 2 may play a role in neuromuscular junction development as an effector of the MUSK signaling pathway.	confident	Q99M87
DnaJ homolog subfamily A member 3, mitochondrial	Modulates apoptotic signal transduction or effector structures within the mitochondrial matrix. Affect cytochrome C release from the mitochondria and caspase 3 activation, but not caspase 8 activation. Isoform 1 increases apoptosis triggered by both TNF and the DNA-damaging agent mytomycin C; in sharp contrast, isoform 2 suppresses apoptosis. Can modulate IFN-gamma-mediated transcriptional activity. Isoform 2 may play a role in neuromuscular junction development as an effector of the MUSK signaling pathway.	confident	Q96EY1

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0003674 [MF]	molecular_function	probable
GO:0005886 [CC]	plasma membrane	probable	GO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0044444 [CC]	cytoplasmic part	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0005730 [CC]	nucleolus	probable	GO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3LZ8, chain A
Confidence level:very confident
Coverage over the Query: 380-408,430-432,468-605
View the alignment between query and template
View the model in PyMOL

Template: 1NLT, chain A
Confidence level:very confident
Coverage over the Query: 377-587
View the alignment between query and template
View the model in PyMOL