Diaphorina citri psyllid: psy11896


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040---
MEHKVKIIHIKQEQVRGKDNVGAVMDSMELERQRGITIQSAATYTLWKDHNINIIDTPGHVDFTVEVERALRVLDGAILVLCAVGGVQSQTLTVNRQMKRYDVPCIAFINKLDRLGADPYRVINQMRQKTSRWISNESLSEHKPIEYIRNIGISAHIDSGKTTLTERILFYTGRISEMHETSRWISNESLSEHKPIEYIRNIGISAHIDSGKTTLTERILFYTGRISEMHEVRGKDNVGAVMDSMELERQRGITIQSAATYTLWKDHNINIIDTPGHVDFTVEVERALRVLDGAILVLCAVGGVQSQTLTVNRQMKRYDVPCIAFINKLDRLGADPYRVINQMRQKVGHNAAFLQIPIGLGSETKGIIDLIQRKAIYFEGPLGDNLRIEEIPADLKKEAESKRQELIEHVAEGDEILGEMFLEEKSISEDDIKKAIRRSTLTRKFTPVLVGTALKNKGVQTLLDAVLDYLPNPGEVTNYAIENGQEDKKVVLNPSRDGKHPFIALAFKLEAGKFGQLTYMRCYQGKLRKGEMIYNVRTDKKVRVSRLVRLHSNEMEDVEEVLAGDIFALFGVDCASGDTFVTDKNNSISLESIYVADPVVSMSIKAVNNKDRDNFSKAVQRFTKEDPTFHFFYDPESKETLVSGMGELHLEIYAQRMEREYNCPVVLGKPKVAFKETLVQPFDFDYLHKKQSGGSGQYGRVIGTLEPLPPSANTKLEFIDETVGTNVPKPFLPAIIKGFKQMCEKGCLSGSRVAGVRMVLKDGDNHMVDSNEISFILAAHGAMKQAYEEGVWQILEPIMSVEISTPIEFQGSVLNLVTKRHGILQGNEGKDDWVTIYAEMCEKGCLSGSRVAGVRMVLKDGDNHMVDSNEISFILAAHGFKQMCEKGCLSGSRVAGVRMVLKDGDNHMVDSNEISFILAAHGAMKQAYEEGVWQILEPIMSVEISTPIEFQGSVLNLVTKRHGILQGNEGKDDWVTIYAEIPLNDMFGFAGDLRSSTQGKGEFSMDYSRYSPALPEVQDRLVNEYQEATNPQAAATQKKKKKN
cccccccEEEccccccccccccccccHHHHHcccccEEEccccccccccccEEEccccccccEEEEEEEEccccccEEEEEEcccccccccHHHHHHcccccccEEEEEEccccccccHHHHHHHHHHHHccccccccccccccCEEEEEccccccccccHHHHHHHHHHccccccccccEEECcccccccccccccccccEEEEEEEcccccccccEEEEEcccccccccccccccccccccHHHHHcccccHHHHHHcccccccccEEEcccccccccEEEEEEEccccccEEEEEEcccccccccHHHHHHcccccccEEEEEEccccccccHHHHHHHHHHHHcccccCEEEccccccccEEEEEEEEEEEEEEcccccccEEEEcccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccHHHHHHHHHHHcccccEEEEEccccccccccHHHHHHHHHccccccccccccccccccccEEEEccccccccccEEEEEcccccccccEEEEEEEEcEEccccEEECcccccEEEcccEEcccccccccccccccccEEEEEcccccccccccccccccEEEEEcccccccEEEEEcccccccHHHHHHHHHHHHHcccccEEEccccccccEEcccccHHHHHHHHHHcccccccccccccccccEEcccccCEccCEEEcccccccccCEEEEEEEccccccccccEEEEccccccccccccHHHHHHHHHHHHcccEECccEEcEEEEEEcccccccccHHHHHHHHHHHHHHHHHHccccEEEEcEEEEEEEccccccccccccccccccEEcccccccccEEEEEEEEccccccccEEEEEEEECcccccccccccccccccccHHHHHHHHcccEEcccEEcEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHcccEEEEcEEEEEEEccccccccccccccccccCEcccccccccEEEEEEccccccccccccccccccccEEEEEEEcccccccHHHHHHHHHHHHHHccHHHHHHHHHHHcc
*EHKVKIIHIKQEQVRGKDNVGAVMDSMELERQRGITIQSAATYTLWKDHNINIIDTPGHVDFTVEVERALRVLDGAILVLCAVGGVQSQTLTVNRQMKRYDVPCIAFINKLDRLGADPYRVINQMRQKTSRWISNESLSEHKPIEYIRNIGISAHIDSGKTTLTERILFYTGRISEMHETSRWISNESLSEHKPIEYIRNIGISAHIDSGKTTLTERILFYTGRISEMHEVRGKDNVGAVMDSMELERQRGITIQSAATYTLWKDHNINIIDTPGHVDFTVEVERALRVLDGAILVLCAVGGVQSQTLTVNRQMKRYDVPCIAFINKLDRLGADPYRVINQMRQKVGHNAAFLQIPIGLGSETKGIIDLIQRKAIYFEGPLGDNLRIEEIPADLKKEAESKRQELIEHVAEGDEILGEMFLEEKSISEDDIKKAIRRSTLTRKFTPVLVGTALKNKGVQTLLDAVLDYLPNPGEVTNYAIENG****KVVLN***DGKHPFIALAFKLEAGKFGQLTYMRCYQGKLRKGEMIYNVRTDKKVRVSRLVRLHSNEMEDVEEVLAGDIFALFGVDCASGDTFVTDKNNSISLESIYVADPVVSMSIKAVNNKDRDNFSKAVQRFTKEDPTFHFFYDPESKETLVSGMGELHLEIYAQRMEREYNCPVVLGKPKVAFKETLVQPFDFDYLHKKQSGGSGQYGRVIGTLEPLPPSANTKLEFIDETVGTNVPKPFLPAIIKGFKQMCEKGCLSGSRVAGVRMVLKDGDNHMVDSNEISFILAAHGAMKQAYEEGVWQILEPIMSVEISTPIEFQGSVLNLVTKRHGILQGNEGKDDWVTIYAEMCEKGCLSGSRVAGVRMVLKDGDNHMVDSNEISFILAAHGFKQMCEKGCLSGSRVAGVRMVLKDGDNHMVDSNEISFILAAHGAMKQAYEEGVWQILEPIMSVEISTPIEFQGSVLNLVTKRHGILQGNEGKDDWVTIYAEIPLNDMFGFAGDLRSSTQGKGEFSMDYSRYSPALPEVQ*************************
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MEHKVKIIHIKQEQVRGKDNVGAVMDSMELERQRGITIQSAATYTLWKDHNINIIDTPGHVDFTVEVERALRVLDGAILVLCAVGGVQSQTLTVNRQMKRYDVPCIAFINKLDRLGADPYRVINQMRQKTSRWISNESLSEHKPIEYIRNIGISAHIDSGKTTLTERILFYTGRISEMHETSRWISNESLSEHKPIEYIRNIGISAHIDSGKTTLTERILFYTGRISEMHEVRGKDNVGAVMDSMELERQRGITIQSAATYTLWKDHNINIIDTPGHVDFTVEVERALRVLDGAILVLCAVGGVQSQTLTVNRQMKRYDVPCIAFINKLDRLGADPYRVINQMRQKVGHNAAFLQIPIGLGSETKGIIDLIQRKAIYFEGPLGDNLRIEEIPADLKKEAESKRQELIEHVAEGDEILGEMFLEEKSISEDDIKKAIRRSTLTRKFTPVLVGTALKNKGVQTLLDAVLDYLPNPGEVTNYAIENGQEDKKVVLNPSRDGKHPFIALAFKLEAGKFGQLTYMRCYQGKLRKGEMIYNVRTDKKVRVSRLVRLHSNEMEDVEEVLAGDIFALFGVDCASGDTFVTDKNNSISLESIYVADPVVSMSIKAVNNKDRDNFSKAVQRFTKEDPTFHFFYDPESKETLVSGMGELHLEIYAQRMEREYNCPVVLGKPKVAFKETLVQPFDFDYLHKKQSGGSGQYGRVIGTLEPLPPSANTKLEFIDETVGTNVPKPFLPAIIKGFKQMCEKGCLSGSRVAGVRMVLKDGDNHMVDSNEISFILAAHGAMKQAYEEGVWQILEPIMSVEISTPIEFQGSVLNLVTKRHGILQGNEGKDDWVTIYAEMCEKGCLSGSRVAGVRMVLKDGDNHMVDSNEISFILAAHGFKQMCEKGCLSGSRVAGVRMVLKDGDNHMVDSNEISFILAAHGAMKQAYEEGVWQILEPIMSVEISTPIEFQGSVLNLVTKRHGILQGNEGKDDWVTIYAEIPLNDMFGFAGDLRSSTQGKGEFSMDYSRYSPALPEVQDRLVNEYQEATNPQAAATQKKKKKN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Elongation factor G, mitochondrial Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.very confidentQ7Q1K8
Elongation factor G, mitochondrial Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity). Essential during development as it acts as a retrograde signal from mitochondria to the nucleus to slow down cell proliferation if mitochondrial energy output is low.very confidentQ9VM33
Elongation factor G, mitochondrial Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Essential during development as it acts as a retrograde signal from mitochondria to the nucleus to slow down cell proliferation if mitochondrial energy output is low.very confidentQ29N77

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005634 [CC]nucleusconfidentGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0003924 [MF]GTPase activityprobableGO:0016787, GO:0016818, GO:0003824, GO:0017111, GO:0016817, GO:0016462, GO:0003674
GO:0070125 [BP]mitochondrial translational elongationprobableGO:0044249, GO:0034645, GO:0044699, GO:0044267, GO:0044260, GO:0071840, GO:0016043, GO:0071704, GO:0010467, GO:0007005, GO:0032543, GO:1901576, GO:0009987, GO:0009058, GO:0009059, GO:0044763, GO:0008152, GO:0006996, GO:0044238, GO:0019538, GO:0044237, GO:0043170, GO:0008150, GO:0006414, GO:0006412
GO:0003746 [MF]translation elongation factor activityprobableGO:0097159, GO:0008135, GO:0003674, GO:0005488, GO:0003676, GO:1901363, GO:0003723
GO:0005524 [MF]ATP bindingprobableGO:0043168, GO:0003674, GO:0005488, GO:0030554, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032553, GO:0032559, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0006184 [BP]GTP catabolic processprobableGO:0046434, GO:0009141, GO:0009143, GO:0009144, GO:0009146, GO:0009166, GO:0009164, GO:0006807, GO:0044237, GO:0072521, GO:0009203, GO:0072523, GO:0046130, GO:0009259, GO:1901360, GO:1901361, GO:0046700, GO:0006139, GO:1901575, GO:0006195, GO:0071704, GO:0042278, GO:1901069, GO:1901068, GO:0009199, GO:0006152, GO:0046483, GO:0044281, GO:0009207, GO:0009205, GO:0009987, GO:0046039, GO:0044238, GO:0009154, GO:0006725, GO:0044710, GO:0009150, GO:0009261, GO:0019637, GO:0009117, GO:0009116, GO:0008152, GO:0034655, GO:0009119, GO:0046128, GO:0009056, GO:0055086, GO:0042454, GO:0044248, GO:1901564, GO:0044270, GO:1901136, GO:1901135, GO:0034641, GO:0019693, GO:0006163, GO:1901657, GO:0006796, GO:1901292, GO:0006793, GO:0019439, GO:0008150, GO:0006753, GO:1901658, GO:1901565
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0000003 [BP]reproductionprobableGO:0008150
GO:0009941 [CC]chloroplast envelopeprobableGO:0009526, GO:0005737, GO:0009536, GO:0005575, GO:0043231, GO:0044464, GO:0043229, GO:0031967, GO:0031975, GO:0044446, GO:0044444, GO:0005623, GO:0044435, GO:0044434, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0044422, GO:0009507
GO:0046686 [BP]response to cadmium ionprobableGO:0042221, GO:0050896, GO:0010035, GO:0008150, GO:0010038
GO:0040010 [BP]positive regulation of growth rateprobableGO:0045927, GO:0040008, GO:0040009, GO:0065007, GO:0048518, GO:0008150, GO:0050789
GO:0009570 [CC]chloroplast stromaprobableGO:0005737, GO:0005575, GO:0009536, GO:0043231, GO:0009532, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0044435, GO:0044434, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0009507
GO:0006898 [BP]receptor-mediated endocytosisprobableGO:0006897, GO:0016192, GO:0006810, GO:0008150, GO:0051234, GO:0051179
GO:0048046 [CC]apoplastprobableGO:0005575, GO:0005576
GO:0005525 [MF]GTP bindingprobableGO:0043168, GO:0003674, GO:0005488, GO:0019001, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032561, GO:0032553, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0002119 [BP]nematode larval developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0009791, GO:0002164, GO:0008150, GO:0007275, GO:0044699
GO:0009792 [BP]embryo development ending in birth or egg hatchingprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0007275, GO:0044699
GO:0040007 [BP]growthprobableGO:0008150

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2XEX, chain A
Confidence level:very confident
Coverage over the Query: 194-235,264-766,908-1025
View the alignment between query and template
View the model in PyMOL
Template: 3CB4, chain D
Confidence level:very confident
Coverage over the Query: 3-20,41-131,145-174
View the alignment between query and template
View the model in PyMOL
Template: 3ZZ0, chain A
Confidence level:very confident
Coverage over the Query: 196-225,257-842
View the alignment between query and template
View the model in PyMOL
Template: 2BM0, chain A
Confidence level:confident
Coverage over the Query: 196-230,254-838
View the alignment between query and template
View the model in PyMOL