Diaphorina citri psyllid: psy12031


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
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TIRNEKVEVKQKWASRLLGKLRKDITQECREDFVLSITGKKPAMCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKAIPLESTDGERLEKAPECAHPSLCVNPYHINVSVRELDLYLANYINSH
ccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccCEEEccccccccEEEEEcccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEHHHHHHHHHHHccc
******V***QKWASRLLGKLRKDITQECREDFVLSITGKKPAMCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKAIPLESTDGERLEKAPECAHPSLCVNPYHINVSVRELDLYLANYINS*
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TIRNEKVEVKQKWASRLLGKLRKDITQECREDFVLSITGKKPAMCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKAIPLESTDGERLEKAPECAHPSLCVNPYHINVSVRELDLYLANYINSH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Nuclear factor 1 A-type Recognizes and binds the palindromic sequence 5'-TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.confidentQ02780
Nuclear factor 1 X-type Recognizes and binds the palindromic sequence 5'-TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.confidentQ90932
Nuclear factor 1 A-type Recognizes and binds the palindromic sequence 5'-TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.confidentQ12857

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0030054 [CC]cell junctionconfidentGO:0005575
GO:0001159 [MF]core promoter proximal region DNA bindingconfidentGO:0044212, GO:0097159, GO:0000975, GO:0001067, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0005730 [CC]nucleolusconfidentGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0006351 [BP]transcription, DNA-dependentconfidentGO:0032774, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0034645, GO:1901362, GO:1901360, GO:1901576, GO:0044260, GO:0071704, GO:0010467, GO:0018130, GO:0006139, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0034654, GO:0046483, GO:0016070, GO:0044238, GO:0044271, GO:0044237, GO:0043170, GO:0019438
GO:0009653 [BP]anatomical structure morphogenesisconfidentGO:0032502, GO:0048856, GO:0008150
GO:0000122 [BP]negative regulation of transcription from RNA polymerase II promoterconfidentGO:0009892, GO:0080090, GO:0009890, GO:0031327, GO:0031326, GO:0031324, GO:0031323, GO:0010629, GO:0050789, GO:0010605, GO:0019222, GO:2000112, GO:2000113, GO:0060255, GO:0006357, GO:0065007, GO:0048519, GO:0010468, GO:0045934, GO:0019219, GO:0009889, GO:0050794, GO:0045892, GO:0051171, GO:0051172, GO:2001141, GO:0051253, GO:0051252, GO:0006355, GO:0010556, GO:0008150, GO:0010558, GO:0048523
GO:0048513 [BP]organ developmentconfidentGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0003690 [MF]double-stranded DNA bindingconfidentGO:0043566, GO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0045944 [BP]positive regulation of transcription from RNA polymerase II promoterconfidentGO:0009893, GO:0019222, GO:0031328, GO:0031326, GO:0031325, GO:2001141, GO:0031323, GO:0010628, GO:0050789, GO:0080090, GO:0010604, GO:0051171, GO:0009891, GO:2000112, GO:0019219, GO:0010556, GO:0065007, GO:0048518, GO:0010468, GO:0045935, GO:0060255, GO:0009889, GO:0050794, GO:0008150, GO:0045893, GO:0051173, GO:0051252, GO:0051254, GO:0006355, GO:0010557, GO:0006357, GO:0048522
GO:0044767 [BP]single-organism developmental processconfidentGO:0032502, GO:0008150, GO:0044699
GO:0003700 [MF]sequence-specific DNA binding transcription factor activityconfidentGO:0003674, GO:0001071
GO:0001077 [MF]RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcriptionprobableGO:0003700, GO:0001228, GO:0003674, GO:0001071, GO:0000982, GO:0000981
GO:0061141 [BP]lung ciliated cell differentiationprobableGO:0032502, GO:0030323, GO:0030324, GO:0030154, GO:0032501, GO:0007275, GO:0044699, GO:0048869, GO:0048513, GO:0030855, GO:0060541, GO:0060429, GO:0060428, GO:0009987, GO:0009888, GO:0044767, GO:0044763, GO:0048731, GO:0035295, GO:0060487, GO:0044707, GO:0048856, GO:0060479, GO:0008150
GO:0006260 [BP]DNA replicationprobableGO:0071704, GO:1901576, GO:0044238, GO:0008152, GO:0044260, GO:0006139, GO:0009987, GO:0006725, GO:0034641, GO:0044237, GO:0043170, GO:0090304, GO:0044249, GO:0009058, GO:0009059, GO:0006807, GO:0034645, GO:0006259, GO:0008150, GO:1901360, GO:0046483
GO:0021680 [BP]cerebellar Purkinje cell layer developmentprobableGO:0032502, GO:0044707, GO:0021549, GO:0007420, GO:0007399, GO:0032501, GO:0048856, GO:0022037, GO:0044767, GO:0048513, GO:0008150, GO:0030902, GO:0048731, GO:0021695, GO:0007275, GO:0044699, GO:0007417
GO:2000795 [BP]negative regulation of epithelial cell proliferation involved in lung morphogenesisprobableGO:0042127, GO:0008285, GO:0050678, GO:0022603, GO:0050793, GO:0050680, GO:0050794, GO:0008150, GO:0065007, GO:2000026, GO:2000027, GO:0051239, GO:2000794, GO:0048519, GO:0050789, GO:0048523
GO:0048708 [BP]astrocyte differentiationprobableGO:0032502, GO:0048856, GO:0044707, GO:0007399, GO:0009987, GO:0048869, GO:0030154, GO:0042063, GO:0008150, GO:0032501, GO:0044763, GO:0010001, GO:0048731, GO:0022008, GO:0007275, GO:0044699, GO:0007417
GO:0043392 [BP]negative regulation of DNA bindingprobableGO:0051098, GO:0051101, GO:0051100, GO:0065007, GO:0044092, GO:0008150, GO:0065009
GO:0071679 [BP]commissural neuron axon guidanceprobableGO:0032502, GO:0044707, GO:0030030, GO:0030154, GO:0048468, GO:0031175, GO:0007411, GO:0009653, GO:0007275, GO:0044699, GO:0000904, GO:0000902, GO:0042330, GO:0048869, GO:0016043, GO:0032989, GO:0071840, GO:0048666, GO:0048667, GO:0032501, GO:0006935, GO:0030182, GO:0009987, GO:0044767, GO:0008150, GO:0007409, GO:0048731, GO:0042221, GO:0022008, GO:0048858, GO:0040011, GO:0048699, GO:0032990, GO:0009605, GO:0050896, GO:0048856, GO:0007399, GO:0048812, GO:0044763
GO:0001106 [MF]RNA polymerase II transcription corepressor activityprobableGO:0001191, GO:0003714, GO:0003712, GO:0001104, GO:0001076, GO:0003674, GO:0000989, GO:0000988
GO:0002062 [BP]chondrocyte differentiationprobableGO:0032502, GO:0051216, GO:0044707, GO:0048869, GO:0032501, GO:0030154, GO:0009888, GO:0061448, GO:0008150, GO:0001501, GO:0048513, GO:0044763, GO:0048731, GO:0009987, GO:0007275, GO:0044699, GO:0048856
GO:0060510 [BP]Type II pneumocyte differentiationprobableGO:0032502, GO:0030323, GO:0030324, GO:0030154, GO:0032501, GO:0007275, GO:0044699, GO:0048869, GO:0048513, GO:0030855, GO:0060541, GO:0060429, GO:0060428, GO:0009987, GO:0009888, GO:0044767, GO:0044763, GO:0048731, GO:0035295, GO:0060487, GO:0044707, GO:0048856, GO:0060479, GO:0008150
GO:0006366 [BP]transcription from RNA polymerase II promoterprobableGO:0032774, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0034645, GO:1901362, GO:1901360, GO:1901576, GO:0044260, GO:0071704, GO:0010467, GO:0018130, GO:0006139, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0034654, GO:0046483, GO:0016070, GO:0044238, GO:0044271, GO:0044237, GO:0043170, GO:0006351, GO:0019438
GO:0021707 [BP]cerebellar granule cell differentiationprobableGO:0044707, GO:0021533, GO:0030154, GO:0022037, GO:0021575, GO:0009653, GO:0007275, GO:0044699, GO:0007417, GO:0048869, GO:0048513, GO:0021696, GO:0021697, GO:0021695, GO:0021953, GO:0032502, GO:0032501, GO:0030182, GO:0009987, GO:0044767, GO:0008150, GO:0021684, GO:0022008, GO:0021549, GO:0021587, GO:0048699, GO:0007420, GO:0007399, GO:0048856, GO:0044763, GO:0048646, GO:0030902, GO:0048731, GO:0021681, GO:0021683
GO:0021960 [BP]anterior commissure morphogenesisprobableGO:0021537, GO:0048666, GO:0044707, GO:0030030, GO:0030154, GO:0048468, GO:0031175, GO:0009653, GO:0007275, GO:0044699, GO:0007417, GO:0000904, GO:0000902, GO:0048869, GO:0016043, GO:0032989, GO:0048513, GO:0071840, GO:0021955, GO:0021954, GO:0021953, GO:0021952, GO:0032502, GO:0048667, GO:0032501, GO:0030182, GO:0009987, GO:0044767, GO:0008150, GO:0007409, GO:0022008, GO:0032990, GO:0007420, GO:0048699, GO:0048858, GO:0007399, GO:0048856, GO:0044763, GO:0048812, GO:0030900, GO:0048731
GO:2000791 [BP]negative regulation of mesenchymal cell proliferation involved in lung developmentprobableGO:0042127, GO:0008285, GO:0072201, GO:0050793, GO:0050789, GO:0008150, GO:0010464, GO:0065007, GO:2000026, GO:0051239, GO:0048519, GO:2000647, GO:0050794, GO:2000790, GO:0072091, GO:0048523
GO:0060509 [BP]Type I pneumocyte differentiationprobableGO:0032502, GO:0030323, GO:0030324, GO:0030154, GO:0032501, GO:0007275, GO:0044699, GO:0048869, GO:0048513, GO:0030855, GO:0060541, GO:0060429, GO:0060428, GO:0009987, GO:0009888, GO:0044767, GO:0044763, GO:0048731, GO:0035295, GO:0060487, GO:0044707, GO:0048856, GO:0060479, GO:0008150
GO:0044300 [CC]cerebellar mossy fiberprobableGO:0044464, GO:0005623, GO:0030424, GO:0005575, GO:0097458, GO:0043005, GO:0042995
GO:0060486 [BP]Clara cell differentiationprobableGO:0032502, GO:0030323, GO:0030324, GO:0030154, GO:0032501, GO:0007275, GO:0044699, GO:0048869, GO:0048513, GO:0030855, GO:0060541, GO:0060429, GO:0060428, GO:0009987, GO:0009888, GO:0044767, GO:0044763, GO:0048731, GO:0035295, GO:0060487, GO:0044707, GO:0048856, GO:0060479, GO:0008150
GO:0021740 [BP]principal sensory nucleus of trigeminal nerve developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0007420, GO:0007399, GO:0048857, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0021730, GO:0007275, GO:0044699, GO:0007417
GO:0042475 [BP]odontogenesis of dentin-containing toothprobableGO:0032502, GO:0009887, GO:0032501, GO:0044707, GO:0042476, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0009653, GO:0007275, GO:0044699
GO:0014070 [BP]response to organic cyclic compoundprobableGO:0042221, GO:0050896, GO:0008150, GO:0010033
GO:0043565 [MF]sequence-specific DNA bindingprobableGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0008134 [MF]transcription factor bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0003705 [MF]RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activityprobableGO:0003700, GO:0003674, GO:0001071, GO:0000981
GO:0007608 [BP]sensory perception of smellprobableGO:0032501, GO:0044707, GO:0050877, GO:0007606, GO:0007600, GO:0008150, GO:0044699, GO:0003008

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3QSV, chain A
Confidence level:confident
Coverage over the Query: 11-71,82-111
View the alignment between query and template
View the model in PyMOL