Diaphorina citri psyllid: psy12112

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240------
MNLHKVTSETVSETSLDQSTAASWWASASLKPAFPDVAGDPFFAAPDPLAPAPQISETLNPSFGSSSNPTYPDLGYTSLDFDTRGLDVLRGNAELSSPEECARACREGEPPKLCYYHFTLELYTVLGAACQLCTPNATNTVWSHCQCVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVTQCPITQGNTFRYQFTANAGTHFWHAHTGCPMSEK
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEHHHHHHHHHHccccccccCEEEEEEEEEcccccEEEEEEEcccccccCEEEEcccEEEEEEEEcccccccCEEEccccccccccccccccccccccccccEEEEEEECccccEEEccccccccccc
******************************************************ISETLNPSFG**********GYTSLDFDTRGLDVLRGNAELSSPEECARACREGEPPKLCYYHFTLELYTVLGAACQLCTPNATNTVWSHCQCVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVTQCPITQGNTFRYQFTANAGTHFWHAHTGCPMS**
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MNLHKVTSETVSETSLDQSTAASWWASASLKPAFPDVAGDPFFAAPDPLAPAPQISETLNPSFGSSSNPTYPDLGYTSLDFDTRGLDVLRGNAELSSPEECARACREGEPPKLCYYHFTLELYTVLGAACQLCTPNATNTVWSHCQCVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVTQCPITQGNTFRYQFTANAGTHFWHAHTGCPMSEK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0045178 [CC]basal part of cellprobableGO:0005575, GO:0044464, GO:0005623
GO:0016491 [MF]oxidoreductase activityprobableGO:0003824, GO:0003674
GO:0009986 [CC]cell surfaceprobableGO:0005575, GO:0044464, GO:0005623
GO:0040003 [BP]chitin-based cuticle developmentprobableGO:0032502, GO:0042335, GO:0044707, GO:0048856, GO:0044767, GO:0032501, GO:0008150, GO:0007275, GO:0044699

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3SQR, chain A
Confidence level:very confident
Coverage over the Query: 104-245
View the alignment between query and template
View the model in PyMOL