Diaphorina citri psyllid: psy12143

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440---
MLSRSVTVLENVAKNTSLKALSAAPSWSQQKRNLNVHEHVSYTLLKEGGIPVPPFGVAKTKKEAGEIAKKLNIKDIVLKAQVLAGGRGKGAFKGGLKGGVKMVDTPEEAEEVAGKMIGDYLITKQTGEKGRICNAVMVTERKYPRKEYYFAFMMERSFAGPVLIASSQGGVNIEEVAAENPSAILYEPVDITVGITKEQALKVADAVGLKAKRDITAEMLIKMYALFISKDASLIEINPYAEDATGNFFGLDAKMRFDDNAEFRQKALFDLRDWSQEDAKEVEAAKHSLNYIALDGSIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGATAAQVKEAFKIITADPKVCAIMVNIFGGIMRCDVIAEGIIAAAQELSLKIPIICRLQGTNVDDAKVLIASAAMKILPCDNLDEAARLAVKLSSIVGLARAAKMEVNFEIPL
cHHcHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHcccccEEEEEEEcccccccccccccccccEEEEccHHHHHHHHHHHHccccccccccccccEEcEEEEEcccccccEEEEEEEEEcccccEEEEEEccccccHHHHHHHccccCEEEEccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccccEEcccccEEEEEEcccccccccccccHHHHccccccccHHHHHHHHccccEEEcccccHHHHccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHHHHHHHccccccEEEEcccccHHHHHHHHHHccccEEEcccHHHHHHHHHHHHHHHHHHHHcccEEEEEccc
***************************SQQKRNLNVHEHVSYTLLKEGGIPVPPFGVAKTKKEAGEIAKKLNIKDIVLKAQVLAGGRGKGAFKGGLKGGVKMVDTPEEAEEVAGKMIGDYLITKQTGEKGRICNAVMVTERKYPRKEYYFAFMMERSFAGPVLIASSQGGVNIEEVAAENPSAILYEPVDITVGITKEQALKVADAVGLKAKRDITAEMLIKMYALFISKDASLIEINPYAEDATGNFFGLDAKMRFDDNAEFRQKALFDLRDWSQEDAKEVEAAKHSLNYIALDGSIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGATAAQVKEAFKIITADPKVCAIMVNIFGGIMRCDVIAEGIIAAAQELSLKIPIICRLQGTNVDDAKVLIASAAMKILPCDNLDEAARLAVKLSSIVGLARAAKMEVNFEIPL
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MLSRSVTVLENVAKNTSLKALSAAPSWSQQKRNLNVHEHVSYTLLKEGGIPVPPFGVAKTKKEAGEIAKKLNIKDIVLKAQVLAGGRGKGAFKGGLKGGVKMVDTPEEAEEVAGKMIGDYLITKQTGEKGRICNAVMVTERKYPRKEYYFAFMMERSFAGPVLIASSQGGVNIEEVAAENPSAILYEPVDITVGITKEQALKVADAVGLKAKRDITAEMLIKMYALFISKDASLIEINPYAEDATGNFFGLDAKMRFDDNAEFRQKALFDLRDWSQEDAKEVEAAKHSLNYIALDGSIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGATAAQVKEAFKIITADPKVCAIMVNIFGGIMRCDVIAEGIIAAAQELSLKIPIICRLQGTNVDDAKVLIASAAMKILPCDNLDEAARLAVKLSSIVGLARAAKMEVNFEIPL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial very confidentP53588
Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial very confidentQ6K9N6
Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial Catalyzes the ATP-dependent ligation of succinate and CoA to form succinyl-CoA.very confidentQ148D5

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005488 [MF]bindingconfidentGO:0003674
GO:0005875 [CC]microtubule associated complexconfidentGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0006104 [BP]succinyl-CoA metabolic processconfidentGO:0035383, GO:0051186, GO:0006637, GO:0006732, GO:0009987, GO:0044237, GO:0071704, GO:0008150, GO:0008152, GO:0006793
GO:0005739 [CC]mitochondrionconfidentGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0006099 [BP]tricarboxylic acid cycleconfidentGO:0044238, GO:0044710, GO:0015980, GO:0009987, GO:0044237, GO:0009060, GO:0008150, GO:0008152, GO:0045333, GO:0006091, GO:0055114
GO:0006105 [BP]succinate metabolic processconfidentGO:0043648, GO:0044710, GO:0006082, GO:0044237, GO:0009987, GO:0019752, GO:0071704, GO:0008150, GO:0044281, GO:0008152, GO:0043436
GO:0005813 [CC]centrosomeconfidentGO:0005856, GO:0005575, GO:0015630, GO:0043232, GO:0044464, GO:0005623, GO:0005815, GO:0044446, GO:0043229, GO:0043228, GO:0044430, GO:0044424, GO:0005622, GO:0043226, GO:0044422
GO:0004775 [MF]succinate-CoA ligase (ADP-forming) activityconfidentGO:0016878, GO:0016405, GO:0003824, GO:0003674, GO:0004774, GO:0016874, GO:0016877
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0045244 [CC]succinate-CoA ligase complex (GDP-forming)probableGO:0031974, GO:0043229, GO:0043227, GO:0043226, GO:0005737, GO:0044446, GO:0005739, GO:0005759, GO:0030062, GO:0045239, GO:0043234, GO:0032991, GO:0043231, GO:0043233, GO:0044464, GO:0042709, GO:0005623, GO:0005622, GO:0005575, GO:0070013, GO:0044444, GO:0044429, GO:0044424, GO:0044422
GO:0005524 [MF]ATP bindingprobableGO:0043168, GO:0003674, GO:0005488, GO:0030554, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032553, GO:0032559, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0007052 [BP]mitotic spindle organizationprobableGO:0006996, GO:0007017, GO:0007010, GO:0000278, GO:0071822, GO:0043933, GO:0071840, GO:0009987, GO:0044763, GO:0016043, GO:0008150, GO:0007051, GO:0022402, GO:0044699, GO:0000226, GO:0007049
GO:0046982 [MF]protein heterodimerization activityprobableGO:0046983, GO:0003674, GO:0005488, GO:0005515
GO:0005507 [MF]copper ion bindingprobableGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:0010824 [BP]regulation of centrosome duplicationprobableGO:0051726, GO:0051493, GO:0033043, GO:0010564, GO:0050794, GO:0051128, GO:0046605, GO:0065007, GO:0008150, GO:0032886, GO:0070507, GO:0050789
GO:0005618 [CC]cell wallprobableGO:0005575, GO:0071944, GO:0044464, GO:0005623, GO:0030312
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0019003 [MF]GDP bindingprobableGO:0043168, GO:0017076, GO:0019001, GO:0097159, GO:1901363, GO:1901265, GO:0043167, GO:0036094, GO:0032561, GO:0003674, GO:0032553, GO:0032549, GO:0032555, GO:0005488, GO:0000166, GO:0032550, GO:0001883, GO:0001882
GO:0004776 [MF]succinate-CoA ligase (GDP-forming) activityprobableGO:0016878, GO:0016405, GO:0003824, GO:0003674, GO:0004774, GO:0016874, GO:0016877
GO:0006781 [BP]succinyl-CoA pathwayprobableGO:0006637, GO:0006732, GO:0006778, GO:0006779, GO:0044249, GO:0034641, GO:0006807, GO:0044281, GO:0044283, GO:1901362, GO:1901360, GO:1901576, GO:0044710, GO:0051186, GO:0006780, GO:0051188, GO:0071704, GO:0033014, GO:0033013, GO:0018130, GO:0035383, GO:0009987, GO:0006725, GO:0009058, GO:0044711, GO:0008150, GO:0019752, GO:0008152, GO:0043436, GO:1901564, GO:0046483, GO:0044271, GO:0006082, GO:1901566, GO:0046394, GO:0016053, GO:0044237, GO:0006104, GO:0006793, GO:0019438, GO:0046502
GO:0009792 [BP]embryo development ending in birth or egg hatchingprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0007275, GO:0044699
GO:0040007 [BP]growthprobableGO:0008150
GO:0005525 [MF]GTP bindingprobableGO:0043168, GO:0003674, GO:0005488, GO:0019001, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032561, GO:0032553, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0009361 [CC]succinate-CoA ligase complex (ADP-forming)probableGO:0043234, GO:0005737, GO:0032991, GO:0044464, GO:0044444, GO:0005623, GO:0005622, GO:0005575, GO:0042709, GO:0045239, GO:0044424

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
6.-.-.-Ligases.probable
6.2.-.-Forming carbon-sulfur bonds.probable
6.2.1.-Acid--thiol ligases.probable
6.2.1.5Succinate--CoA ligase (ADP-forming).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2FP4, chain B
Confidence level:very confident
Coverage over the Query: 34-424
View the alignment between query and template
View the model in PyMOL