Diaphorina citri psyllid: psy12210


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-----
MPRTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM
ccccccccccccccccHHcccccccEEEcccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccEEEcccccccccccccccccccccEEEccccccccccHHHHcccccccEEEcccccccccccccccccccccEEEccccccccccccHHHHHHHHHccccccccccccccccccccccccccccCECccccccccccHcccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccEEEccccccccccccEEEcccccccccccccccccccccEEcccccccccccccccccccccccc
MPRTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLR*M
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MPRTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELRLEQNDITELPPKAFANYKRLRRIDLSKNQISKVAVDAFQGLKSLTSLTLNNNNLTYLPDGVFAELFRLRTLRISENSFICDCHLSWLHRWLKRYPRLGLYTKCFAPSHIKGQNILDIPEHEFKCSGSSMETRSKIYREECSTDFHPYNSCPVEKPTGECAAEPSCPHPCRCADGIVDCREKGLNKVPILLPEATTELTYMVSIDRVDKVLLYSYISNNFKRWTNRSRRLEQNDITELPPKAFANYKRLRRIRLEQNDITELPPKAFANYKRLRRM

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005615 [CC]extracellular spaceprobableGO:0005575, GO:0005576, GO:0044421
GO:2000026 [BP]regulation of multicellular organismal developmentprobableGO:0050793, GO:0008150, GO:0065007, GO:0050789, GO:0051239
GO:0048523 [BP]negative regulation of cellular processprobableGO:0008150, GO:0048519, GO:0065007, GO:0050789, GO:0050794
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0008201 [MF]heparin bindingprobableGO:0043168, GO:1901681, GO:0097367, GO:0043167, GO:0005539, GO:0003674, GO:0005488
GO:0050922 [BP]negative regulation of chemotaxisprobableGO:0040013, GO:0040012, GO:0032102, GO:0032101, GO:0048585, GO:0048583, GO:0050795, GO:0008150, GO:0065007, GO:0050920, GO:0048519, GO:0048521, GO:0050789
GO:0071666 [CC]Slit-Robo signaling complexprobableGO:0005575, GO:0032991, GO:0032992
GO:0031012 [CC]extracellular matrixprobableGO:0005575
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0030334 [BP]regulation of cell migrationprobableGO:0051270, GO:0050794, GO:0008150, GO:0040012, GO:2000145, GO:0065007, GO:0032879, GO:0050789
GO:0021834 [BP]chemorepulsion involved in embryonic olfactory bulb interneuron precursor migrationprobableGO:0021537, GO:0032502, GO:0044707, GO:0021826, GO:0030154, GO:0048468, GO:0006928, GO:0021988, GO:0051674, GO:0021885, GO:0021889, GO:0007275, GO:0044699, GO:0007417, GO:0051179, GO:0042330, GO:0048869, GO:0021891, GO:0048513, GO:0021879, GO:0030900, GO:0016477, GO:0021872, GO:0021953, GO:0048666, GO:0021831, GO:0006935, GO:0030182, GO:0032501, GO:0009987, GO:0048731, GO:0044767, GO:0008150, GO:0021772, GO:0050919, GO:0042221, GO:0022008, GO:0022028, GO:0022029, GO:0040011, GO:0048699, GO:0007420, GO:0009605, GO:0048870, GO:0050896, GO:0048856, GO:0007399, GO:0021843, GO:0044763
GO:0048846 [BP]axon extension involved in axon guidanceprobableGO:0048675, GO:0048666, GO:0044707, GO:0048589, GO:0048588, GO:0030030, GO:0030154, GO:0048468, GO:0031175, GO:0007411, GO:0009653, GO:0007275, GO:0044699, GO:0000902, GO:0000904, GO:0016049, GO:0040007, GO:0042330, GO:0048869, GO:0016043, GO:0032989, GO:0071840, GO:0060560, GO:0032502, GO:0048667, GO:0032501, GO:0006935, GO:0030182, GO:0009987, GO:0044767, GO:0044763, GO:0007409, GO:0048731, GO:0042221, GO:0022008, GO:0032990, GO:0040011, GO:0048699, GO:0048858, GO:0009605, GO:0050896, GO:0048856, GO:0007399, GO:0048812, GO:0008150

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1ZIW, chain A
Confidence level:very confident
Coverage over the Query: 18-39,52-211,224-250,263-403
View the alignment between query and template
View the model in PyMOL
Template: 3T6Q, chain A
Confidence level:very confident
Coverage over the Query: 2-212,223-404
View the alignment between query and template
View the model in PyMOL
Template: 1Z7X, chain W
Confidence level:very confident
Coverage over the Query: 2-83,99-254,288-396
View the alignment between query and template
View the model in PyMOL