Diaphorina citri psyllid: psy12238


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160------
MCQNMLVILAHFLCKYFLGFSSNFKLFSKFGDTKSDGKLLTLSQSDKWMKQAKVIDGKKVTTTDTGIHFKKFKSLKIGLSDYQKFIESLAKHKSVPEYDVWASKNSEAQIQNTISRLTDPSRYTGSHKLRFDEAGKGKGLAGRKDSVEAAGYVQGYQNRNSYDKTH
ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHcccccccccccccccEEEEEECcccccccHHHHHHHHHHHccccccccHcccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
***NMLVILAHFLCKYFLGFSSNFKLFSKFGDTKSDGKLLTLSQSDKWMKQAKVIDGKKVTTTDTGIHFKKFKSLKIGLSDYQKFIESLAKHK**********************RLTDPSRYTGSHKLRFD*******LAGRKDSVEAAGYVQ*Y**********
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MCQNMLVILAHFLCKYFLGFSSNFKLFSKFGDTKSDGKLLTLSQSDKWMKQAKVIDGKKVTTTDTGIHFKKFKSLKIGLSDYQKFIESLAKHKSVPEYDVWASKNSEAQIQNTISRLTDPSRYTGSHKLRFDEAGKGKGLAGRKDSVEAAGYVQGYQNRNSYDKTH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Tubulin polymerization-promoting protein family member 3 Binds tubulin and has microtubule bundling activity. May play a role in cell proliferation and mitosis.confidentQ5PPN5
Tubulin polymerization-promoting protein family member 3 Binds tubulin and has microtubule bundling activity. May play a role in cell proliferation and mitosis.confidentA4IIY2
TPPP family protein CG4893 confidentQ9VV43

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0044424 [CC]intracellular partprobableGO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0001578 [BP]microtubule bundle formationprobableGO:0006996, GO:0007017, GO:0007010, GO:0009987, GO:0016043, GO:0008150, GO:0044763, GO:0071840, GO:0000226, GO:0044699
GO:0048812 [BP]neuron projection morphogenesisprobableGO:0032502, GO:0044707, GO:0030030, GO:0030154, GO:0048468, GO:0031175, GO:0009653, GO:0007275, GO:0071840, GO:0000902, GO:0048869, GO:0016043, GO:0032989, GO:0044699, GO:0048666, GO:0032501, GO:0030182, GO:0009987, GO:0044767, GO:0044763, GO:0048731, GO:0022008, GO:0032990, GO:0048699, GO:0048858, GO:0007399, GO:0048856, GO:0008150
GO:0015631 [MF]tubulin bindingprobableGO:0003674, GO:0005488, GO:0005515, GO:0008092

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2JRF, chain A
Confidence level:very confident
Coverage over the Query: 18-166
View the alignment between query and template
View the model in PyMOL