Diaphorina citri psyllid: psy12253

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------15
MRIIIMKRGAPRQVAVLLVLRNKKTQEEICIATTHLKARNGALLSTLRNEQEPTEPIYNTVMNHETLGLTSAYRHRTANNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGRDRIPSLRYPSDHFSLVCDLTLKK
cEEEEEEcccccHHHHHHHHHccccccEEEEEEEEcccccccHHHHHHcccccccccccccccccccccccccccccccccccccCEEEEcccccCEccEEEEEECccccEEEEECccccccccccccccccccccccHHHEEEEEEEc
*RIIIMKRGAPRQVAVLLVLRNKKTQEEICIATTHLKARNGALLSTLRNEQEPTEPIYNTVMNHETLGLTSAYRHRTANNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGRDRIPSLRYPSDHFSLVCDLTLKK
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MRIIIMKRGAPRQVAVLLVLRNKKTQEEICIATTHLKARNGALLSTLRNEQEPTEPIYNTVMNHETLGLTSAYRHRTANNQEPQYTTWKIREEGEVCHTIDYVFYSQDKFDVEAVLDMPSGEQIGRDRIPSLRYPSDHFSLVCDLTLKK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0043229 [CC]intracellular organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424, GO:0043226
GO:0030014 [CC]CCR4-NOT complexprobableGO:0043234, GO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3NGQ, chain A
Confidence level:very confident
Coverage over the Query: 5-148
View the alignment between query and template
View the model in PyMOL