Diaphorina citri psyllid: psy12516

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------

MKVASALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGKSMQCGVKEIAVFASASEMFSKRNINCTIEESLERFSEVVSTALTNGIRVRGYISCVVGCPYEGAVPPHNVTRVATALYKMGCYEISLGDTIGVGTPGTMRLMLEDVLTVIPADRLAVHCHDTYGQALANILTAMEFGISVFDSSIAGLGGCPYARGASGNVATEDLVYMLEGMGIETGADLTSLLRTGHYICGKLKKPSNSKVAKALPVKETSKTLESYANFDF

cHHHHHHHHccccEEEcccccccccHHHHHHHHHHHHHHccccccEEEcHHcHHHHHHHHHHHHHccccEEcccccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHccccHHHHHHHHHHHHHHHHHccccEEEEEEEEEcccccccccHHHHHHHHHHHHHccccEEEcccccccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHccccHHccccccccccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccHHHHcccccccccHHHHHHcccc

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic	Non-mitochondrial 3-hydroxymethyl-3-methylglutaryl-CoA lyase that catalyzes a cation-dependent cleavage of (S)-3-hydroxy-3-methylglutaryl-CoA into acetyl-CoA and acetoacetate, a key step in ketogenesis, the products of which support energy production in nonhepatic animal tissues.	confident	D4A5C3
3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic	Involved in the catabolism of branched amino acids such as leucine.	confident	A8WG57
Hydroxymethylglutaryl-CoA lyase, mitochondrial	Key enzyme in ketogenesis (ketone body formation). Terminal step in leucine catabolism.	confident	Q29448

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0043229 [CC]	intracellular organelle	confident	GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424, GO:0043226
GO:0008150 [BP]	biological_process	confident
GO:0006637 [BP]	acyl-CoA metabolic process	probable	GO:0035383, GO:0051186, GO:0006732, GO:0009987, GO:0044237, GO:0071704, GO:0008150, GO:0008152, GO:0006793
GO:0005777 [CC]	peroxisome	probable	GO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0042579, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0005829 [CC]	cytosol	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005875 [CC]	microtubule associated complex	probable	GO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0048471 [CC]	perinuclear region of cytoplasm	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0030145 [MF]	manganese ion binding	probable	GO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:0000287 [MF]	magnesium ion binding	probable	GO:0043169, GO:0046872, GO:0003674, GO:0005488, GO:0043167
GO:0042803 [MF]	protein homodimerization activity	probable	GO:0046983, GO:0003674, GO:0005515, GO:0042802, GO:0005488
GO:0005743 [CC]	mitochondrial inner membrane	probable	GO:0019866, GO:0031975, GO:0043229, GO:0043227, GO:0043226, GO:0005737, GO:0044446, GO:0031090, GO:0016020, GO:0005740, GO:0005739, GO:0031967, GO:0031966, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044429, GO:0044424, GO:0044422
GO:0051262 [BP]	protein tetramerization	probable	GO:0051259, GO:0022607, GO:0071822, GO:0070271, GO:0043933, GO:0006461, GO:0016043, GO:0065003, GO:0044085, GO:0008150, GO:0071840
GO:0046951 [BP]	ketone body biosynthetic process	probable	GO:0044710, GO:0044711, GO:0009987, GO:0044237, GO:0044249, GO:0009058, GO:0008150, GO:0044281, GO:0008152, GO:0044283, GO:0046950
GO:0005789 [CC]	endoplasmic reticulum membrane	probable	GO:0005737, GO:0005575, GO:0005783, GO:0044432, GO:0016020, GO:0044464, GO:0043229, GO:0005623, GO:0043231, GO:0044446, GO:0042175, GO:0044444, GO:0012505, GO:0044424, GO:0044425, GO:0005622, GO:0043227, GO:0043226, GO:0044422, GO:0031090
GO:0044255 [BP]	cellular lipid metabolic process	probable	GO:0044238, GO:0044710, GO:0006629, GO:0009987, GO:0044237, GO:0071704, GO:0008150, GO:0008152
GO:0007005 [BP]	mitochondrion organization	probable	GO:0006996, GO:0009987, GO:0016043, GO:0044763, GO:0044699, GO:0008150, GO:0071840
GO:0004419 [MF]	hydroxymethylglutaryl-CoA lyase activity	probable	GO:0003824, GO:0016829, GO:0016830, GO:0003674, GO:0016833
GO:0046395 [BP]	carboxylic acid catabolic process	probable	GO:0044712, GO:1901575, GO:0008152, GO:0006082, GO:0044237, GO:0016054, GO:0009987, GO:0044710, GO:0019752, GO:0044248, GO:0071704, GO:0008150, GO:0044281, GO:0044282, GO:0043436, GO:0009056
GO:0070542 [BP]	response to fatty acid	probable	GO:1901700, GO:0033993, GO:0050896, GO:0008150, GO:0042221, GO:0010033
GO:0005102 [MF]	receptor binding	probable	GO:0003674, GO:0005488, GO:0005515
GO:0009790 [BP]	embryo development	probable	GO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0008150, GO:0007275, GO:0044699
GO:0031406 [MF]	carboxylic acid binding	probable	GO:0043168, GO:0003674, GO:0005488, GO:0043167
GO:0001889 [BP]	liver development	probable	GO:0032502, GO:0032501, GO:0044707, GO:0061008, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0042594 [BP]	response to starvation	probable	GO:0009991, GO:0009605, GO:0050896, GO:0031667, GO:0006950, GO:0008150
GO:0000062 [MF]	fatty-acyl-CoA binding	probable	GO:0043168, GO:0050662, GO:0043167, GO:0003674, GO:0005488, GO:0048037
GO:0005759 [CC]	mitochondrial matrix	probable	GO:0005737, GO:0005575, GO:0043231, GO:0043233, GO:0031974, GO:0044464, GO:0043229, GO:0005739, GO:0005622, GO:0044446, GO:0070013, GO:0044444, GO:0044429, GO:0044424, GO:0005623, GO:0043227, GO:0043226, GO:0044422
GO:0007584 [BP]	response to nutrient	probable	GO:0009991, GO:0009605, GO:0050896, GO:0031667, GO:0008150, GO:0042221
GO:0006551 [BP]	leucine metabolic process	probable	GO:0044238, GO:0044710, GO:0009987, GO:1901564, GO:0006082, GO:1901605, GO:0006520, GO:0019752, GO:0071704, GO:0006807, GO:0008150, GO:0044281, GO:0008152, GO:0043436, GO:0044237, GO:0009081

Prediction of Enzyme Commission Number

EC Number	Description	Confidence Level
4.-.-.-	Lyases.	probable
4.1.-.-	Carbon-carbon lyases.	probable
4.1.3.-	Oxo-acid-lyases.	probable
4.1.3.4	Hydroxymethylglutaryl-CoA lyase.	probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1YDO, chain A
Confidence level:very confident
Coverage over the Query: 103-309
View the alignment between query and template
View the model in PyMOL

Template: 2CW6, chain A
Confidence level:very confident
Coverage over the Query: 2-115
View the alignment between query and template
View the model in PyMOL