Psyllid ID: psy12538

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90---
Protein Sequence
MVELGSQAGGESARLVWFPVQDCLGSSARLAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSIDFV
Secondary Structure (PSIPRED)
ccccEEcccccHHHHHccccccccccccccccccccccccccccccccEEccccEEEEEEEcccEEEEEEEEEEcccccEEEEEccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEccccccHHHHHHHHHccccccccccccccccccccccccccccEccHHHEEEEEEEEEcccEEEEEEEEcccEEEEEEEEcccccccc
Coil and Loop (DISEMBL)
mvelgsqaggesarlvwfpvqdclgssarlavekpvtgglshstrdqwEIDRNSLKFVRKLgsgqfgevweglwnnttPVAIKTlkmgsidfv
Flexible Loop (DISEMBL)
mvelgsqaggesarlvWFPVQDCLGSSARlavekpvtgglshstrdqweiDRNSLKFVRKLGSgqfgevweglwnnttpvaiktlkmgsidfv
Low Complexity Region (SEG)
MVELGSQAGGESARLVWFPVQDCLGSSARLAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSIDFV
Disordered region (IsUnstruct)
*************RLVWFPVQDCLGSSARLAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM******
Disordered Region (DISOPRED)
MVELGSQAGGESARLVWFPVQDCLGSSARLAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSIDFV
Disordered Region (DISEMBL)
*********GESARLVWFPVQDCLGSSARLAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSIDFV
Disordered Region (DISPRO)
*VELGSQAGGESARLVWFPVQDCLGSSARLAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVELGSQAGGESARLVWFPVQDCLGSSARLAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSIDFV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	93	2.2.26 [Sep-21-2011]
Q9V9J3	517	Tyrosine-protein kinase S	yes	N/A	0.645	0.116	0.866	1e-26
Q922K9	512	Tyrosine-protein kinase F	yes	N/A	0.666	0.121	0.677	1e-20
P42685	505	Tyrosine-protein kinase F	yes	N/A	0.666	0.122	0.677	1e-20
Q62662	506	Tyrosine-protein kinase F	yes	N/A	0.666	0.122	0.677	2e-20
P42688	362	Tyrosine-protein kinase S	N/A	N/A	0.548	0.140	0.666	4e-17
P42690	506	Tyrosine-protein kinase i	N/A	N/A	0.655	0.120	0.573	2e-16
P42686	505	Tyrosine-protein kinase i	N/A	N/A	0.655	0.120	0.573	2e-16
P17713	509	Tyrosine-protein kinase S	N/A	N/A	0.591	0.108	0.637	4e-16
P42689	334	Tyrosine-protein kinase S	N/A	N/A	0.612	0.170	0.580	2e-14
Q02977	536	Proto-oncogene tyrosine-p	no	N/A	0.827	0.143	0.493	5e-14

>sp|Q9V9J3|SRC42_DROME Tyrosine-protein kinase Src42A OS=Drosophila melanogaster GN=Src42A PE=2 SV=1

 Score =  118 bits (295), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/60 (86%), Positives = 56/60 (93%)

Query: 32  VEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
           +EKPVT GLSH TRDQWEIDR SLKFVRKLGSGQFG+VWEGLWNNTTPVAIKTLK G++D
Sbjct: 225 IEKPVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLKSGTMD 284

Essential for correct eye morphogenesis (ommatidial R7 neuron formation), this requires the Ras1/MAPK signal transduction pathway. May be involved in the regulation of cytoskeleton organization and cell-cell contacts in developing ommatidia.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: 0EC: .EC: 2

>sp|Q922K9|FRK_MOUSE Tyrosine-protein kinase FRK OS=Mus musculus GN=Frk PE=1 SV=3

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/62 (67%), Positives = 52/62 (83%)

Query: 30  LAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS 89
           L ++ P    LS+ T DQWEIDRNS++ +++LGSGQFGEVWEGLWNNTTPVA+KTLK GS
Sbjct: 216 LKIQVPTPFDLSYKTADQWEIDRNSIQLLKRLGSGQFGEVWEGLWNNTTPVAVKTLKPGS 275

Query: 90  ID 91
           +D
Sbjct: 276 MD 277

Non-receptor tyrosine-protein kinase that negatively regulates cell proliferation. Positively regulates PTEN protein stability through phosphorylation of PTEN on 'Tyr-336', which in turn prevents its ubiquitination and degradation, possibly by reducing its binding to NEDD4. May function as a tumor suppressor.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P42685|FRK_HUMAN Tyrosine-protein kinase FRK OS=Homo sapiens GN=FRK PE=1 SV=1

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/62 (67%), Positives = 52/62 (83%)

Query: 30  LAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS 89
           L ++ P    LS+ T DQWEIDRNS++ +++LGSGQFGEVWEGLWNNTTPVA+KTLK GS
Sbjct: 209 LKIQVPAPFDLSYKTVDQWEIDRNSIQLLKRLGSGQFGEVWEGLWNNTTPVAVKTLKPGS 268

Query: 90  ID 91
           +D
Sbjct: 269 MD 270

Non-receptor tyrosine-protein kinase that negatively regulates cell proliferation. Positively regulates PTEN protein stability through phosphorylation of PTEN on 'Tyr-336', which in turn prevents its ubiquitination and degradation, possibly by reducing its binding to NEDD4. May function as a tumor suppressor.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|Q62662|FRK_RAT Tyrosine-protein kinase FRK OS=Rattus norvegicus GN=Frk PE=2 SV=3

 Score = 97.8 bits (242), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/62 (67%), Positives = 52/62 (83%)

Query: 30  LAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS 89
           L ++ P    LS+ T DQWEIDRNS++ +++LGSGQFGEVWEGLWNNTTPVA+KTLK GS
Sbjct: 210 LKIQVPTPFDLSYKTVDQWEIDRNSIQLLKRLGSGQFGEVWEGLWNNTTPVAVKTLKPGS 269

Query: 90  ID 91
           +D
Sbjct: 270 MD 271

Non-receptor tyrosine-protein kinase that negatively regulates cell proliferation. Positively regulates PTEN protein stability through phosphorylation of PTEN on 'Tyr-336', which in turn prevents its ubiquitination and degradation, possibly by reducing its binding to NEDD4. May function as a tumor suppressor.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P42688|SRK2_SPOLA Tyrosine-protein kinase SRK2 (Fragment) OS=Spongilla lacustris GN=SRK2 PE=2 SV=1

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/51 (66%), Positives = 45/51 (88%)

Query: 40  LSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
           LSH T+D WEI R+S+  +RKLG+GQFGEV++GLWNN+TPVA+KTLK G++
Sbjct: 80  LSHKTKDMWEISRDSITLIRKLGAGQFGEVYQGLWNNSTPVAVKTLKAGTM 130

Spongilla lacustris (taxid: 6055)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P42690|SRK4_SPOLA Tyrosine-protein kinase isoform SRK4 OS=Spongilla lacustris GN=SRK1 PE=2 SV=1

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/61 (57%), Positives = 47/61 (77%)

Query: 30  LAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS 89
           + +EKP T GLS    ++WEI++  +K +R LG+GQFGEVWEGLWN TT VA+KTLK G+
Sbjct: 215 MVMEKPQTAGLSKQANEEWEIEKKQIKLLRGLGAGQFGEVWEGLWNGTTSVAVKTLKPGT 274

Query: 90  I 90
           +
Sbjct: 275 M 275

Spongilla lacustris (taxid: 6055)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P42686|SRK1_SPOLA Tyrosine-protein kinase isoform SRK1 OS=Spongilla lacustris GN=SRK1 PE=2 SV=1

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/61 (57%), Positives = 46/61 (75%)

Query: 30  LAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS 89
           L  EKP T GL     ++WEI++  +K +R+LG+GQFGEVWEGLWN TT VA+KTLK G+
Sbjct: 215 LQAEKPQTAGLLRQANEEWEIEKTQIKLLRRLGAGQFGEVWEGLWNGTTSVAVKTLKPGT 274

Query: 90  I 90
           +
Sbjct: 275 M 275

Spongilla lacustris (taxid: 6055)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P17713|STK_HYDVU Tyrosine-protein kinase STK OS=Hydra vulgaris GN=STK PE=2 SV=1

 Score = 83.2 bits (204), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/58 (63%), Positives = 47/58 (81%), Gaps = 3/58 (5%)

Query: 33  EKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
           +KPVTGG++   +D WEI R SL+  RKLG+GQFGEVW G+WNNTT VA+KTLK G++
Sbjct: 221 DKPVTGGIA---KDAWEIPRESLRLNRKLGAGQFGEVWAGVWNNTTQVAVKTLKPGTM 275

Hydra vulgaris (taxid: 6087)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P42689|SRK3_SPOLA Tyrosine-protein kinase SRK3 (Fragment) OS=Spongilla lacustris GN=SRK3 PE=2 SV=1

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/62 (58%), Positives = 45/62 (72%), Gaps = 5/62 (8%)

Query: 35  PVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLK---MGSID 91
           P+T GLS+  +D+WEIDR +++  RKLG G FGEVW G+WN TT VA+KTLK   M   D
Sbjct: 48  PITSGLSY--KDEWEIDRTTIQLQRKLGQGNFGEVWAGVWNGTTAVAVKTLKPDTMEVKD 105

Query: 92  FV 93
           FV
Sbjct: 106 FV 107

Spongilla lacustris (taxid: 6055)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|Q02977|YRK_CHICK Proto-oncogene tyrosine-protein kinase Yrk OS=Gallus gallus GN=YRK PE=2 SV=2

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 4/81 (4%)

Query: 14  RLVWFPVQDCLGSSARLAVE----KPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEV 69
           +LV   ++   G   RLAV      P    LS  T+D WEI R SL+ ++KLG+GQFGEV
Sbjct: 225 QLVQHYIERAAGLCCRLAVPCPKGTPKLADLSVKTKDVWEIPRESLQLLQKLGNGQFGEV 284

Query: 70  WEGLWNNTTPVAIKTLKMGSI 90
           W G WN TT VA+KTLK G++
Sbjct: 285 WMGTWNGTTKVAVKTLKPGTM 305

May participate in signaling pathways.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	93
193683390	522	PREDICTED: tyrosine-protein kinase Src42	0.645	0.114	0.916	1e-26
242015484	466	tyrosine-protein kinase Src42A, putative	0.645	0.128	0.883	1e-25
312383148	606	hypothetical protein AND_03893 [Anophele	0.645	0.099	0.866	2e-25
195119910	523	GI19952 [Drosophila mojavensis] gi|19540	0.645	0.114	0.866	3e-25
357614811	898	hypothetical protein KGM_08102 [Danaus p	0.645	0.066	0.883	3e-25
158295650	508	AGAP006270-PA [Anopheles gambiae str. PE	0.645	0.118	0.866	3e-25
157129304	392	proto-oncogene tyrosine-protein kinase s	0.645	0.153	0.866	3e-25
195027551	524	GH21475 [Drosophila grimshawi] gi|193902	0.645	0.114	0.866	3e-25
442622385	1597	Src oncogene at 42A, isoform B [Drosophi	0.645	0.037	0.866	3e-25
195430152	518	GK21551 [Drosophila willistoni] gi|19415	0.645	0.115	0.866	4e-25

>gi|193683390|ref|XP_001944820.1| PREDICTED: tyrosine-protein kinase Src42A-like isoform 1 [Acyrthosiphon pisum]

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/60 (91%), Positives = 58/60 (96%)

Query: 32  VEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
           VEKPVTGGLSHSTRDQWEIDR+SLKFVRKLG GQFGEVWEGLWNNTTPVAIKTLK G++D
Sbjct: 233 VEKPVTGGLSHSTRDQWEIDRSSLKFVRKLGHGQFGEVWEGLWNNTTPVAIKTLKTGTMD 292

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242015484|ref|XP_002428383.1| tyrosine-protein kinase Src42A, putative [Pediculus humanus corporis] gi|212512995|gb|EEB15645.1| tyrosine-protein kinase Src42A, putative [Pediculus humanus corporis]

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/60 (88%), Positives = 57/60 (95%)

Query: 32  VEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
           +EKPVTGGLSHSTRDQWEIDR SLKFVRKLG GQFG+VWEGLWNNTTPVAIKTLK G++D
Sbjct: 177 IEKPVTGGLSHSTRDQWEIDRKSLKFVRKLGHGQFGDVWEGLWNNTTPVAIKTLKPGTMD 236

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312383148|gb|EFR28343.1| hypothetical protein AND_03893 [Anopheles darlingi]

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/60 (86%), Positives = 56/60 (93%)

Query: 32  VEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
           +EKPVT GLSH TRDQWEIDR SLKFVRKLGSGQFG+VWEGLWNNTTPVAIKTLK G++D
Sbjct: 270 IEKPVTDGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLKSGTMD 329

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195119910|ref|XP_002004472.1| GI19952 [Drosophila mojavensis] gi|195401471|ref|XP_002059336.1| GJ17854 [Drosophila virilis] gi|193909540|gb|EDW08407.1| GI19952 [Drosophila mojavensis] gi|194142342|gb|EDW58748.1| GJ17854 [Drosophila virilis]

 Score =  119 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/60 (86%), Positives = 56/60 (93%)

Query: 32  VEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
           +EKPVT GLSH TRDQWEIDR SLKFVRKLGSGQFG+VWEGLWNNTTPVAIKTLK G++D
Sbjct: 231 IEKPVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLKSGTMD 290

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357614811|gb|EHJ69286.1| hypothetical protein KGM_08102 [Danaus plexippus]

 Score =  119 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/60 (88%), Positives = 56/60 (93%)

Query: 32  VEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
           VEKPVT GLSH TRDQWEIDR+SLKFVRKLG GQFGEVWEGLWNNTTPVAIKTLK G++D
Sbjct: 609 VEKPVTEGLSHRTRDQWEIDRSSLKFVRKLGHGQFGEVWEGLWNNTTPVAIKTLKSGTMD 668

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158295650|ref|XP_316335.3| AGAP006270-PA [Anopheles gambiae str. PEST] gi|157016138|gb|EAA10750.4| AGAP006270-PA [Anopheles gambiae str. PEST]

 Score =  119 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/60 (86%), Positives = 56/60 (93%)

Query: 32  VEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
           +EKPVT GLSH TRDQWEIDR SLKFVRKLGSGQFG+VWEGLWNNTTPVAIKTLK G++D
Sbjct: 219 IEKPVTDGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLKSGTMD 278

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157129304|ref|XP_001655359.1| proto-oncogene tyrosine-protein kinase src [Aedes aegypti] gi|108882094|gb|EAT46319.1| AAEL002471-PA [Aedes aegypti]

 Score =  119 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/60 (86%), Positives = 56/60 (93%)

Query: 32  VEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
           +EKPVT GLSH TRDQWEIDR SLKFVRKLGSGQFG+VWEGLWNNTTPVAIKTLK G++D
Sbjct: 103 IEKPVTDGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLKSGTMD 162

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195027551|ref|XP_001986646.1| GH21475 [Drosophila grimshawi] gi|193902646|gb|EDW01513.1| GH21475 [Drosophila grimshawi]

 Score =  119 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/60 (86%), Positives = 56/60 (93%)

Query: 32  VEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
           +EKPVT GLSH TRDQWEIDR SLKFVRKLGSGQFG+VWEGLWNNTTPVAIKTLK G++D
Sbjct: 232 IEKPVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLKSGTMD 291

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442622385|ref|NP_610191.2| Src oncogene at 42A, isoform B [Drosophila melanogaster] gi|440214097|gb|AAM68338.2| Src oncogene at 42A, isoform B [Drosophila melanogaster]

 Score =  119 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/60 (86%), Positives = 56/60 (93%)

Query: 32   VEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
            +EKPVT GLSH TRDQWEIDR SLKFVRKLGSGQFG+VWEGLWNNTTPVAIKTLK G++D
Sbjct: 1305 IEKPVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLKSGTMD 1364

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195430152|ref|XP_002063120.1| GK21551 [Drosophila willistoni] gi|194159205|gb|EDW74106.1| GK21551 [Drosophila willistoni]

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 52/60 (86%), Positives = 56/60 (93%)

Query: 32  VEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
           +EKPVT GLSH TRDQWEIDR SLKFVRKLGSGQFG+VWEGLWNNTTPVAIKTLK G++D
Sbjct: 226 IEKPVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLKSGTMD 285

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	93
FB|FBgn0264959	517	Src42A "Src oncogene at 42A" [	0.645	0.116	0.866	1.4e-24
UNIPROTKB|E1C2F6	507	FRK "Uncharacterized protein"	0.645	0.118	0.783	1.2e-20
UNIPROTKB|F1RZK6	511	FRK "Uncharacterized protein"	0.666	0.121	0.693	5.5e-20
UNIPROTKB|B4DY49	363	FRK "cDNA FLJ59784, highly sim	0.666	0.170	0.677	7e-20
MGI|MGI:103265	512	Frk "fyn-related kinase" [Mus	0.666	0.121	0.677	2e-19
UNIPROTKB|P42685	505	FRK "Tyrosine-protein kinase F	0.666	0.122	0.677	3.1e-19
RGD|621423	506	Frk "fyn-related kinase" [Ratt	0.666	0.122	0.677	3.1e-19
UNIPROTKB|Q62662	506	Frk "Tyrosine-protein kinase F	0.666	0.122	0.677	3.1e-19
UNIPROTKB|J9NY14	505	FRK "Uncharacterized protein"	0.666	0.122	0.677	5.2e-19
UNIPROTKB|F1PR52	509	FRK "Uncharacterized protein"	0.666	0.121	0.677	5.3e-19

FB|FBgn0264959 Src42A "Src oncogene at 42A" [Drosophila melanogaster (taxid:7227)]

 Score = 286 (105.7 bits), Expect = 1.4e-24, P = 1.4e-24
 Identities = 52/60 (86%), Positives = 56/60 (93%)

Query:    32 VEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
             +EKPVT GLSH TRDQWEIDR SLKFVRKLGSGQFG+VWEGLWNNTTPVAIKTLK G++D
Sbjct:   225 IEKPVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLKSGTMD 284

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=ISS

GO:0007154 "cell communication" evidence=IDA

GO:0005912 "adherens junction" evidence=IDA

GO:0048749 "compound eye development" evidence=IMP

GO:0004713 "protein tyrosine kinase activity" evidence=ISS;IDA;NAS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IGI

GO:0042059 "negative regulation of epidermal growth factor receptor signaling pathway" evidence=IGI

GO:0007391 "dorsal closure" evidence=IGI;IMP;TAS

GO:0006468 "protein phosphorylation" evidence=IMP;IDA;NAS

GO:0007254 "JNK cascade" evidence=TAS

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0046529 "imaginal disc fusion, thorax closure" evidence=IMP

GO:0007395 "dorsal closure, spreading of leading edge cells" evidence=IMP

GO:0007424 "open tracheal system development" evidence=IMP

GO:0051017 "actin filament bundle assembly" evidence=IMP

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

GO:0007435 "salivary gland morphogenesis" evidence=IMP

GO:0006099 "tricarboxylic acid cycle" evidence=IDA

GO:0034332 "adherens junction organization" evidence=IMP

GO:0090136 "epithelial cell-cell adhesion" evidence=IMP

GO:0043277 "apoptotic cell clearance" evidence=IMP

GO:0045886 "negative regulation of synaptic growth at neuromuscular junction" evidence=IGI

UNIPROTKB|E1C2F6 FRK "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 250 (93.1 bits), Expect = 1.2e-20, P = 1.2e-20
 Identities = 47/60 (78%), Positives = 52/60 (86%)

Query:    32 VEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
             V+ P T  LS+ T DQWEIDR SLKF++KLGSGQFGEVWEGLWNNTTPVAIKTLK GS+D
Sbjct:   214 VQIPTTFDLSYKTVDQWEIDRKSLKFLKKLGSGQFGEVWEGLWNNTTPVAIKTLKPGSMD 273

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1RZK6 FRK "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 244 (91.0 bits), Expect = 5.5e-20, P = 5.5e-20
 Identities = 43/62 (69%), Positives = 53/62 (85%)

Query:    30 LAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS 89
             L ++ P T  LS+ T DQWEIDRNS++ +++LGSGQFGEVWEGLWNNTTPVA+KTLK GS
Sbjct:   218 LKIQVPATIDLSYKTADQWEIDRNSIQLLKRLGSGQFGEVWEGLWNNTTPVAVKTLKPGS 277

Query:    90 ID 91
             +D
Sbjct:   278 MD 279

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

UNIPROTKB|B4DY49 FRK "cDNA FLJ59784, highly similar to Tyrosine-protein kinase FRK (EC 2.7.10.2)" [Homo sapiens (taxid:9606)]

 Score = 237 (88.5 bits), Expect = 7.0e-20, P = 7.0e-20
 Identities = 42/62 (67%), Positives = 52/62 (83%)

Query:    30 LAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS 89
             L ++ P    LS+ T DQWEIDRNS++ +++LGSGQFGEVWEGLWNNTTPVA+KTLK GS
Sbjct:    67 LKIQVPAPFDLSYKTVDQWEIDRNSIQLLKRLGSGQFGEVWEGLWNNTTPVAVKTLKPGS 126

Query:    90 ID 91
             +D
Sbjct:   127 MD 128

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

MGI|MGI:103265 Frk "fyn-related kinase" [Mus musculus (taxid:10090)]

 Score = 239 (89.2 bits), Expect = 2.0e-19, P = 2.0e-19
 Identities = 42/62 (67%), Positives = 52/62 (83%)

Query:    30 LAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS 89
             L ++ P    LS+ T DQWEIDRNS++ +++LGSGQFGEVWEGLWNNTTPVA+KTLK GS
Sbjct:   216 LKIQVPTPFDLSYKTADQWEIDRNSIQLLKRLGSGQFGEVWEGLWNNTTPVAVKTLKPGS 275

Query:    90 ID 91
             +D
Sbjct:   276 MD 277

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=ISO

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|P42685 FRK "Tyrosine-protein kinase FRK" [Homo sapiens (taxid:9606)]

 Score = 237 (88.5 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 42/62 (67%), Positives = 52/62 (83%)

Query:    30 LAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS 89
             L ++ P    LS+ T DQWEIDRNS++ +++LGSGQFGEVWEGLWNNTTPVA+KTLK GS
Sbjct:   209 LKIQVPAPFDLSYKTVDQWEIDRNSIQLLKRLGSGQFGEVWEGLWNNTTPVAVKTLKPGS 268

Query:    90 ID 91
             +D
Sbjct:   269 MD 270

GO:0005524 "ATP binding" evidence=IEA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0006468 "protein phosphorylation" evidence=TAS

GO:0005622 "intracellular" evidence=TAS

GO:0008285 "negative regulation of cell proliferation" evidence=TAS

RGD|621423 Frk "fyn-related kinase" [Rattus norvegicus (taxid:10116)]

 Score = 237 (88.5 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 42/62 (67%), Positives = 52/62 (83%)

Query:    30 LAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS 89
             L ++ P    LS+ T DQWEIDRNS++ +++LGSGQFGEVWEGLWNNTTPVA+KTLK GS
Sbjct:   210 LKIQVPTPFDLSYKTVDQWEIDRNSIQLLKRLGSGQFGEVWEGLWNNTTPVAVKTLKPGS 269

Query:    90 ID 91
             +D
Sbjct:   270 MD 271

GO:0004713 "protein tyrosine kinase activity" evidence=IEA;IDA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0030154 "cell differentiation" evidence=IEP

UNIPROTKB|Q62662 Frk "Tyrosine-protein kinase FRK" [Rattus norvegicus (taxid:10116)]

 Score = 237 (88.5 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 42/62 (67%), Positives = 52/62 (83%)

Query:    30 LAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS 89
             L ++ P    LS+ T DQWEIDRNS++ +++LGSGQFGEVWEGLWNNTTPVA+KTLK GS
Sbjct:   210 LKIQVPTPFDLSYKTVDQWEIDRNSIQLLKRLGSGQFGEVWEGLWNNTTPVAVKTLKPGS 269

Query:    90 ID 91
             +D
Sbjct:   270 MD 271

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|J9NY14 FRK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 235 (87.8 bits), Expect = 5.2e-19, P = 5.2e-19
 Identities = 42/62 (67%), Positives = 53/62 (85%)

Query:    30 LAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS 89
             L ++ PVT  LS+ T DQWEIDR+S++ +++LGSGQFGEVWEGLWNNTT VA+KTLK GS
Sbjct:   213 LKIQVPVTFDLSYKTADQWEIDRSSVQLLKRLGSGQFGEVWEGLWNNTTSVAVKTLKPGS 272

Query:    90 ID 91
             +D
Sbjct:   273 MD 274

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

UNIPROTKB|F1PR52 FRK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 235 (87.8 bits), Expect = 5.3e-19, P = 5.3e-19
 Identities = 42/62 (67%), Positives = 53/62 (85%)

Query:    30 LAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS 89
             L ++ PVT  LS+ T DQWEIDR+S++ +++LGSGQFGEVWEGLWNNTT VA+KTLK GS
Sbjct:   213 LKIQVPVTFDLSYKTADQWEIDRSSVQLLKRLGSGQFGEVWEGLWNNTTSVAVKTLKPGS 272

Query:    90 ID 91
             +D
Sbjct:   273 MD 274

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q62662	FRK_RAT	2, ., 7, ., 1, 0, ., 2	0.6774	0.6666	0.1225	yes	N/A
Q9V9J3	SRC42_DROME	2, ., 7, ., 1, 0, ., 2	0.8666	0.6451	0.1160	yes	N/A
P42685	FRK_HUMAN	2, ., 7, ., 1, 0, ., 2	0.6774	0.6666	0.1227	yes	N/A
Q922K9	FRK_MOUSE	2, ., 7, ., 1, 0, ., 2	0.6774	0.6666	0.1210	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	93
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	7e-27
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-23
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	2e-18
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	5e-16
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	4e-15
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-13
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-12
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	2e-12
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	2e-12
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-11
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-09
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-09
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-08
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-08
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-08
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	4e-08
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-07
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	1e-06
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-06
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	3e-06
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	5e-06
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	6e-06
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	7e-06
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	1e-05
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-05
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	3e-05
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-05
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-05
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	8e-05
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	1e-04
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-04
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-04
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	3e-04
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	4e-04
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	5e-04
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	5e-04
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	6e-04
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	6e-04
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	7e-04
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	7e-04
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	8e-04
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	0.001
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	0.001
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	0.001
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	0.001
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	0.002
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	0.002
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	0.002
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	0.002
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	0.002
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	0.003
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	0.003
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	0.003

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 98.3 bits (245), Expect = 7e-27
 Identities = 34/44 (77%), Positives = 41/44 (93%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
          WEIDR S++ +RKLG+GQFGEVWEGLWNNTTPVA+KTLK G++D
Sbjct: 1  WEIDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD 44

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 89.3 bits (222), Expect = 2e-23
 Identities = 30/44 (68%), Positives = 34/44 (77%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
          WEI R SLK  RKLG+GQFGEVW G WN TT VA+KTLK G++ 
Sbjct: 1  WEIPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMS 44

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 76.0 bits (187), Expect = 2e-18
 Identities = 27/44 (61%), Positives = 34/44 (77%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
          WE+ R +LK V+KLG+GQFGEVW G +N  T VAIK+LK GS+ 
Sbjct: 1  WEVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS 44

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 70.1 bits (171), Expect = 5e-16
 Identities = 28/43 (65%), Positives = 36/43 (83%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          WEI R S+K V+KLG+GQFGEVW G +NN+T VA+KTLK G++
Sbjct: 1  WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM 43

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 67.7 bits (165), Expect = 4e-15
 Identities = 27/43 (62%), Positives = 34/43 (79%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          WEI R SL+ ++KLG+GQFGEVW G WN  T VA+KTLK G++
Sbjct: 1  WEIPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM 43

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 62.8 bits (153), Expect = 2e-13
 Identities = 25/39 (64%), Positives = 25/39 (64%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLK 86
          WE  R      RKLGSG FGEVWEGLW N   VAIK LK
Sbjct: 1  WERPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILK 39

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 60.8 bits (147), Expect = 1e-12
 Identities = 28/43 (65%), Positives = 31/43 (72%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 1  WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 43

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 60.5 bits (146), Expect = 2e-12
 Identities = 28/43 (65%), Positives = 31/43 (72%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 1  WEIPRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM 43

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 60.4 bits (146), Expect = 2e-12
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          WEI R SLK  +KLG+GQFGEVW   +N  T VA+KT+K GS+
Sbjct: 1  WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM 43

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 5/40 (12%)

Query: 55 LKFVRKLGSGQFGEVWEGLW-----NNTTPVAIKTLKMGS 89
          L+  +KLG G FGEV++G          T VA+KTLK G+
Sbjct: 1  LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGA 40

Length = 258

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 52.6 bits (127), Expect = 1e-09
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 5/42 (11%)

Query: 55 LKFVRKLGSGQFGEVWEGLW-----NNTTPVAIKTLKMGSID 91
          L   +KLG G FGEV++G            VA+KTLK  + +
Sbjct: 1  LTLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASE 42

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 5/42 (11%)

Query: 55 LKFVRKLGSGQFGEVWEGLWNNT-----TPVAIKTLKMGSID 91
          L   +KLG G FGEV++G            VA+KTLK  + +
Sbjct: 1  LTLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASE 42

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 49.6 bits (118), Expect = 1e-08
 Identities = 19/41 (46%), Positives = 27/41 (65%)

Query: 50 IDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          I  + L  V+++GSGQFG VW G W     VAIKT++ G++
Sbjct: 1  IHPSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM 41

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 49.5 bits (118), Expect = 1e-08
 Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 5/42 (11%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLW---NNTTPVAIKTLK 86
          WE++R  +    KLG GQ+GEV+EG+W   + T  VA+KTLK
Sbjct: 1  WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLK 40

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 4/32 (12%)

Query: 59 RKLGSGQFGEVWEGLW----NNTTPVAIKTLK 86
          +KLG G FGEV++G        TT VA+KTLK
Sbjct: 1  KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLK 32

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 48.2 bits (115), Expect = 4e-08
 Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 3/47 (6%)

Query: 50 IDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI---DFV 93
          ID + L F+++LGSGQFG V  G W     VAIK ++ G++   DF+
Sbjct: 1  IDPSELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFI 47

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 46.6 bits (111), Expect = 2e-07
 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 6/44 (13%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNT------TPVAIKTL 85
          WE+ R  +  +R+LG G FG V+EGL          T VAIKT+
Sbjct: 1  WELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTV 44

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 44.5 bits (105), Expect = 1e-06
 Identities = 20/41 (48%), Positives = 26/41 (63%)

Query: 50 IDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          ID   L F+++LG+GQFG V  G W     VAIK +K GS+
Sbjct: 1  IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM 41

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 44.3 bits (105), Expect = 1e-06
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLK 86
          W I+   LK    +G G+FG+V  G +     VA+K LK
Sbjct: 1  WAINSKELKLGATIGKGEFGDVMLGDYRGQK-VAVKCLK 38

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 42.9 bits (101), Expect = 3e-06
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 3/47 (6%)

Query: 50 IDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI---DFV 93
          I+ + L F+++LGSGQFG V  G W     VAIK +  G++   DF+
Sbjct: 1  INPSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFI 47

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 42.3 bits (100), Expect = 5e-06
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 4/46 (8%)

Query: 50 IDRNSLKFVRKLGSGQFGEVWEGLWN----NTTPVAIKTLKMGSID 91
          ID + +   + +G G+FGEV  G           VAIKTLK GS D
Sbjct: 1  IDPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSD 46

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 42.1 bits (99), Expect = 6e-06
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 6/47 (12%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWE----GLWN--NTTPVAIKTLK 86
          ++WE  R++L+F + LG+G FG+V E    GL    N   VA+K LK
Sbjct: 31 EKWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLK 77

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 42.0 bits (99), Expect = 7e-06
 Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 6/43 (13%)

Query: 49 EIDRNSLKFVRKLGSGQFGEVWEGLW------NNTTPVAIKTL 85
          E+ R+S+  +R LG G FGEV+EGL+           VA+KTL
Sbjct: 2  EVPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTL 44

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 41.3 bits (97), Expect = 1e-05
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 4/43 (9%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLK 86
          +EI R  +   R +G GQFG+V++G++    N    VA+KT K
Sbjct: 1  YEIQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCK 43

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 40.9 bits (96), Expect = 2e-05
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 6/51 (11%)

Query: 47 QWEIDRNSLKFVRKLGSGQFGEVWEGLW------NNTTPVAIKTLKMGSID 91
          +WE+ R+ L   + LG G FG+V +         N T+ VA+K LK  + +
Sbjct: 6  EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATE 56

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 40.5 bits (95), Expect = 3e-05
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 5/37 (13%)

Query: 55 LKFVRKLGSGQFGEVWEGLW-----NNTTPVAIKTLK 86
          L+ ++ LGSG FG V++G+W         PVAIK L+
Sbjct: 9  LEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLR 45

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 55 LKFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLK 86
           + +RKLGSG FG V++     T   VA+K LK
Sbjct: 1  YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILK 33

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          + + KLG G FG+V+      T   VAIK +K   I 
Sbjct: 2  EILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIK 38

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 39.1 bits (92), Expect = 8e-05
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNTTP-VAIKTLK 86
          K +++LG G FG V+      T   VAIK +K
Sbjct: 2  KVIKQLGDGTFGSVYLARNKETGELVAIKKMK 33

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 38.7 bits (90), Expect = 1e-04
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 6/46 (13%)

Query: 47 QWEIDRNSLKFVRKLGSGQFGEVWE----GLW--NNTTPVAIKTLK 86
          +WE  RN L F + LG+G FG+V E    GL+  +    VA+K LK
Sbjct: 29 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLK 74

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)

Query: 61 LGSGQFGEVWEGLWNNT-TPVAIKTLK 86
          LG G FG V+      T   VAIK +K
Sbjct: 1  LGEGGFGTVYLARDKKTGKKVAIKIIK 27

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 59 RKLGSGQFGEVWEGLWNNTTPVAIKTLKM 87
           K+G G FG+V++G+    T VA+KT + 
Sbjct: 1  EKIGKGNFGDVYKGVLKGNTEVAVKTCRS 29

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 4/31 (12%)

Query: 60 KLGSGQFGEVWEGLWNNTT----PVAIKTLK 86
          KLG G FG V  G W+ +     PVA+K LK
Sbjct: 2  KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLK 32

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 37.5 bits (87), Expect = 3e-04
 Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 7/38 (18%)

Query: 61 LGSGQFGEVWEG-----LWNNTTP--VAIKTLKMGSID 91
          LGSG FGEV+EG     L   + P  VA+KTL+ G+ D
Sbjct: 3  LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATD 40

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 36.9 bits (85), Expect = 4e-04
 Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 5/37 (13%)

Query: 55 LKFVRKLGSGQFGEVWEGLW-----NNTTPVAIKTLK 86
          LK V+ LGSG FG V++G+W     N   PVAIK L+
Sbjct: 9  LKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLR 45

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 36.6 bits (85), Expect = 5e-04
 Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 5/37 (13%)

Query: 55 LKFVRKLGSGQFGEV----WEGLWNNTTP-VAIKTLK 86
          LKF+++LG G FG+V    ++ L +NT   VA+K+L 
Sbjct: 6  LKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLN 42

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 36.8 bits (85), Expect = 5e-04
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 6/49 (12%)

Query: 47 QWEIDRNSLKFVRKLGSGQFGEVWE----GLWNNTT--PVAIKTLKMGS 89
          +WE  R+ LK  + LG G FG+V +    G+  + +   VA+K LK G+
Sbjct: 1  KWEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA 49

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 36.5 bits (84), Expect = 6e-04
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 5/37 (13%)

Query: 55 LKFVRKLGSGQFGEVWEGLW-----NNTTPVAIKTLK 86
           K ++ LGSG FG V++GLW         PVAIK L+
Sbjct: 9  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR 45

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 36.7 bits (85), Expect = 6e-04
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 6/46 (13%)

Query: 47 QWEIDRNSLKFVRKLGSGQFGEVWE----GLWNN--TTPVAIKTLK 86
          +WE  RN+L F + LG+G FG+V E    GL  +     VA+K LK
Sbjct: 29 KWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLK 74

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 36.3 bits (84), Expect = 7e-04
 Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 6/44 (13%)

Query: 49 EIDRNSLKFVRKLGSGQFGEVWEG------LWNNTTPVAIKTLK 86
          EI  ++++F+ +LG G FG+V++G         + T VAIKTLK
Sbjct: 1  EIPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLK 44

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSI 90
          +  +KLG G +  V++     T   VAIK +K+G  
Sbjct: 3  EKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGER 38

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 36.2 bits (84), Expect = 8e-04
 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 17/60 (28%)

Query: 49 EIDRNSLKFVRKLGSGQFGEV----------------WEGLWNN-TTPVAIKTLKMGSID 91
          E  R  L FV KLG GQFGEV                 E    +    VA+K L+  + D
Sbjct: 1  EFPRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD 60

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 35.9 bits (81), Expect = 0.001
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 54 SLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLK 86
          S + +RKLG G FGEV+     +   VA+K L 
Sbjct: 1  SYRILRKLGEGSFGEVYLAR--DRKLVALKVLA 31

Length = 384

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 35.7 bits (82), Expect = 0.001
 Identities = 15/26 (57%), Positives = 19/26 (73%)

Query: 61 LGSGQFGEVWEGLWNNTTPVAIKTLK 86
          LG G FGEV++G   + TPVA+KT K
Sbjct: 3  LGKGNFGEVFKGTLKDKTPVAVKTCK 28

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 35.7 bits (82), Expect = 0.001
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 6/44 (13%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNT------TPVAIKTL 85
          WE+ R  +  +R+LG G FG V+EG   +       T VA+KT+
Sbjct: 1  WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV 44

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 35.4 bits (81), Expect = 0.001
 Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 6/44 (13%)

Query: 49 EIDRNSLKFVRKLGSGQFGEVWEGLWNNTTP------VAIKTLK 86
          EI+ ++++F+ +LG  +FG+V++G    T P      VAIKTLK
Sbjct: 1  EINLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLK 44

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 35.1 bits (81), Expect = 0.002
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 6/49 (12%)

Query: 49 EIDRNSLKFVRKLGSGQFGEVWEGLWNNTTP------VAIKTLKMGSID 91
           + R+++   R+LG G FG+V+ G   +  P      VA+KTLK  + +
Sbjct: 1  HVQRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASN 49

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 34.9 bits (80), Expect = 0.002
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 4/46 (8%)

Query: 50 IDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKMGSID 91
          ID + +K  + +G+G+FGEV  G          PVAIKTLK G  +
Sbjct: 1  IDASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTE 46

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 35.0 bits (80), Expect = 0.002
 Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 6/45 (13%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWE----GLWNN--TTPVAIKTLK 86
          WE+ R++L   R LGSG FG V E    GL ++  T  VA+K LK
Sbjct: 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLK 76

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 34.9 bits (81), Expect = 0.002
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLK 86
          + + K+G G FGEV++     T   VAIK +K
Sbjct: 3  EILEKIGKGGFGEVYKARHKRTGKEVAIKVIK 34

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 35.0 bits (80), Expect = 0.002
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 6/44 (13%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNT------TPVAIKTL 85
          WE+ R  +   R+LG G FG V+EG+          T VAIKT+
Sbjct: 1  WEVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTV 44

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 34.8 bits (80), Expect = 0.003
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 6/47 (12%)

Query: 49 EIDRNSLKFVRKLGSGQFGEVWE----GL--WNNTTPVAIKTLKMGS 89
          E  RN++++VR +G G FG V++    GL  +   T VA+K LK  +
Sbjct: 1  EYPRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA 47

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 34.5 bits (79), Expect = 0.003
 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 49 EIDRNSLKFVRKLGSGQFGEVWEGLWN----NTTPVAIKTLKMGSID 91
          E+D  S+K  R LG+G+FGE+  G          PVAI TL+ G  D
Sbjct: 1  ELDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSD 47

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 34.6 bits (79), Expect = 0.003
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 4/44 (9%)

Query: 49 EIDRNSLKFVRKLGSGQFGEVWEGLWN----NTTPVAIKTLKMG 88
          EI  + +   + +G+G+FGEV+ G+          VAIKTLK G
Sbjct: 1  EIHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPG 44

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	93
KOG4278|consensus	1157		98.99
KOG0197|consensus	468		98.79
KOG0193|consensus	678		98.45
KOG0194|consensus	474		97.84
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	97.77
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	97.73
KOG0192|consensus	362		97.7
KOG0196|consensus	996		97.65
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	97.63
KOG2052|consensus	513		97.57
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	97.55
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	97.54
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	97.5
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	97.48
KOG1187|consensus	361		97.39
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	97.38
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	97.37
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	97.35
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	97.33
KOG1026|consensus	774		97.27
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	97.26
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	97.23
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	97.23
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	97.17
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	97.17
KOG4257|consensus	974		97.15
KOG1094|consensus	807		97.13
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	97.06
PLN03224	507	probable serine/threonine protein kinase; Provisio	97.06
KOG0199|consensus	1039		97.05
KOG0694|consensus	694		97.02
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	97.02
KOG1095|consensus	1025		97.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	96.99
KOG0659|consensus	318		96.9
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	96.89
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	96.89
PTZ00284	467	protein kinase; Provisional	96.87
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	96.86
KOG0580|consensus	281		96.83
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	96.83
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	96.83
KOG0200|consensus	609		96.8
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	96.79
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	96.78
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	96.77
KOG0595|consensus	429		96.76
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	96.75
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	96.74
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	96.72
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	96.72
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	96.71
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	96.71
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	96.69
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	96.69
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	96.69
KOG0605|consensus	550		96.68
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	96.68
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	96.66
KOG0667|consensus	586		96.62
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	96.62
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	96.59
KOG3653|consensus	534		96.58
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	96.57
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	96.54
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	96.53
PTZ00036	440	glycogen synthase kinase; Provisional	96.53
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	96.52
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	96.51
KOG0201|consensus	467		96.5
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	96.5
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	96.48
PRK09188	365	serine/threonine protein kinase; Provisional	96.46
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	96.46
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	96.45
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	96.45
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	96.45
PTZ00283	496	serine/threonine protein kinase; Provisional	96.44
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	96.44
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	96.43
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	96.43
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	96.43
PHA02882	294	putative serine/threonine kinase; Provisional	96.41
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	96.41
PTZ00263	329	protein kinase A catalytic subunit; Provisional	96.4
KOG0597|consensus	808		96.38
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	96.38
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	96.37
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	96.34
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	96.31
PLN00034	353	mitogen-activated protein kinase kinase; Provision	96.3
KOG0658|consensus	364		96.29
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	96.27
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	96.24
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	96.23
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	96.22
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	96.22
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	96.21
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	96.2
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	96.2
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	96.2
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	96.2
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	96.19
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	96.18
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	96.18
smart00090	237	RIO RIO-like kinase.	96.18
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	96.14
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	96.13
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	96.12
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	96.12
KOG1025|consensus	1177		96.11
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	96.11
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	96.08
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	96.08
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	96.05
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	96.03
KOG0593|consensus	396		96.02
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	96.01
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	96.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	95.99
KOG1163|consensus	341		95.96
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	95.96
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	95.96
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	95.95
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	95.94
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	95.94
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	95.94
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	95.91
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	95.91
KOG4236|consensus	888		95.9
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	95.9
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	95.88
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	95.87
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	95.87
KOG0600|consensus	560		95.87
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	95.85
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	95.84
KOG4721|consensus	904		95.83
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	95.78
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	95.78
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	95.77
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	95.76
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	95.75
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	95.72
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	95.71
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	95.68
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	95.66
KOG1165|consensus	449		95.64
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	95.63
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	95.63
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	95.6
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	95.59
KOG1166|consensus	974		95.58
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	95.57
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	95.56
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	95.56
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	95.54
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	95.54
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	95.54
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	95.52
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	95.51
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	95.49
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	95.48
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	95.48
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	95.47
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	95.46
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	95.46
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	95.43
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	95.43
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	95.42
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	95.42
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	95.41
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	95.4
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	95.4
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	95.39
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	95.38
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	95.38
KOG0594|consensus	323		95.38
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	95.37
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	95.36
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	95.35
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	95.34
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	95.32
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	95.32
KOG0663|consensus	419		95.31
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	95.28
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	95.27
KOG0598|consensus	357		95.26
KOG0591|consensus	375		95.25
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	95.24
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	95.24
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	95.24
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	95.23
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	95.22
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	95.21
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	95.18
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	95.15
PHA03209	357	serine/threonine kinase US3; Provisional	95.13
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	95.11
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	95.11
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	95.1
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	95.09
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	95.08
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	95.07
KOG0696|consensus	683		95.05
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	95.05
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	95.02
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	95.01
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	95.01
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	95.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	95.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	95.0
KOG0575|consensus	592		94.98
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	94.95
KOG1035|consensus	1351		94.95
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	94.94
KOG0662|consensus	292		94.93
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	94.92
PHA03212	391	serine/threonine kinase US3; Provisional	94.92
KOG0582|consensus	516		94.91
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	94.91
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	94.88
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	94.88
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	94.87
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	94.86
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	94.84
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	94.84
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	94.83
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	94.81
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	94.77
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	94.76
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	94.75
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	94.75
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	94.74
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	94.73
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	94.72
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	94.72
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	94.72
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	94.71
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	94.71
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	94.67
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	94.66
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	94.66
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	94.66
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	94.63
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	94.63
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	94.62
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	94.61
KOG0032|consensus	382		94.6
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	94.59
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	94.59
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	94.58
PHA02988	283	hypothetical protein; Provisional	94.57
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	94.56
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	94.53
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	94.53
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	94.52
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	94.51
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	94.5
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	94.48
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	94.47
PLN00009	294	cyclin-dependent kinase A; Provisional	94.47
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	94.44
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	94.42
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	94.41
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	94.4
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	94.37
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	94.36
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	94.32
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	94.32
KOG4250|consensus	732		94.31
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	94.31
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	94.3
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	94.29
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	94.28
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	94.25
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	94.2
KOG1989|consensus	738		94.18
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	94.17
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	94.13
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	94.12
PRK14879	211	serine/threonine protein kinase; Provisional	94.12
PTZ00266	1021	NIMA-related protein kinase; Provisional	94.06
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	94.06
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	94.05
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	94.04
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	94.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	93.99
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	93.96
KOG0583|consensus	370		93.94
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	93.9
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	93.88
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	93.87
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	93.85
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	93.81
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	93.81
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	93.8
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	93.73
KOG0615|consensus	475		93.72
PTZ00024	335	cyclin-dependent protein kinase; Provisional	93.72
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	93.72
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	93.69
KOG0592|consensus	604		93.68
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	93.68
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	93.61
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	93.61
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	93.59
COG0661	517	AarF Predicted unusual protein kinase [General fun	93.59
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	93.58
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	93.58
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	93.52
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	93.47
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	93.4
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	93.38
PHA03207	392	serine/threonine kinase US3; Provisional	93.37
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	93.37
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	93.36
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	93.35
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	93.25
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	93.2
PHA03211	461	serine/threonine kinase US3; Provisional	93.17
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	93.16
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	93.16
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	93.09
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	93.03
KOG0198|consensus	313		93.02
KOG0661|consensus	538		93.01
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	92.97
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	92.95
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	92.92
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	92.89
KOG0577|consensus	948		92.88
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	92.85
KOG0574|consensus	502		92.84
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	92.83
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	92.82
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	92.8
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	92.67
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	92.58
KOG4258|consensus	1025		92.57
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	92.57
KOG1164|consensus	322		92.5
KOG1006|consensus	361		92.45
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	92.43
KOG0660|consensus	359		92.42
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	92.18
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	92.16
KOG0585|consensus	576		92.1
KOG1152|consensus	772		92.09
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	92.05
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	91.99
PRK09605	535	bifunctional UGMP family protein/serine/threonine	91.97
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	91.85
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	91.76
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	91.73
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	91.55
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	91.47
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	91.4
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	91.37
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	91.22
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	91.06
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	90.98
KOG0586|consensus	596		90.65
KOG0581|consensus	364		90.2
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	90.1
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	90.1
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	90.09
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	89.98
KOG0612|consensus	1317		89.79
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	89.74
KOG1290|consensus	590		89.51
KOG0576|consensus	829		89.35
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	89.35
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	89.06
KOG4717|consensus	864		88.74
KOG0610|consensus	459		88.65
KOG0668|consensus	338		88.56
KOG0616|consensus	355		88.55
KOG0983|consensus	391		88.24
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	88.06
KOG1235|consensus	538		87.86
PHA03210	501	serine/threonine kinase US3; Provisional	87.78
KOG0690|consensus	516		87.46
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	87.22
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	87.12
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	87.04
KOG2345|consensus	302		86.88
PTZ00267	478	NIMA-related protein kinase; Provisional	86.63
KOG0611|consensus	668		85.81
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	84.68
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	84.36
KOG0984|consensus	282		84.08
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	83.22
KOG0589|consensus	426		82.38
KOG0695|consensus	593		80.73
PRK10345	210	hypothetical protein; Provisional	80.31
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	80.18

>KOG4278|consensus

Probab=98.99  E-value=2.8e-10  Score=86.96  Aligned_cols=76  Identities=38%  Similarity=0.746  Sum_probs=63.7

Q ss_pred             ecCccCcceeEeeeeccccccCCCcCcCCCCCccCCCCCCCCCceeEecCCceeeceEeeecccEEEEEEeCC-CCeEEE
Q psy12538          4 LGSQAGGESARLVWFPVQDCLGSSARLAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAI   82 (93)
Q Consensus         4 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vav   82 (93)
                      ++..++||++-|+| |-+.|         .+|...+.++.. +.||+++.+|.+.++||-|.||+||.|.|+. ...|||
T Consensus       229 HStvADGLittLhY-PApK~---------nKptvygvSPn~-DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAV  297 (1157)
T KOG4278|consen  229 HSTVADGLITTLHY-PAPKK---------NKPTVYGVSPNA-DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV  297 (1157)
T ss_pred             ccccccceeEeeec-cCccC---------CCCceeeecCCc-chhhccchheeeeeccCCCcccceeeeeeeccceeeeh
Confidence            37889999999999 54433         566666766644 7799999999999999999999999999965 679999


Q ss_pred             EEecCCCc
Q psy12538         83 KTLKMGSI   90 (93)
Q Consensus        83 K~l~~~~~   90 (93)
                      |.|+.+++
T Consensus       298 KtLKEDtM  305 (1157)
T KOG4278|consen  298 KTLKEDTM  305 (1157)
T ss_pred             hhhhhcch
Confidence            99998776

>KOG0197|consensus

Probab=98.79  E-value=1.8e-09  Score=79.76  Aligned_cols=75  Identities=52%  Similarity=0.846  Sum_probs=58.5

Q ss_pred             cCccCcceeEeeeeccccccCCCcCcCCCCCccCCCCCCCCCceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEE
Q psy12538          5 GSQAGGESARLVWFPVQDCLGSSARLAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKT   84 (93)
Q Consensus         5 ~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~   84 (93)
                      ..+++|++++|+. |.....   +    ..|.+.+..   .+.|+++++.+.+.+.||+|.||+||.|.|++...||+|.
T Consensus       169 ~~~~~gl~~~l~~-p~~~~~---~----~~p~~~~~~---~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~  237 (468)
T KOG0197|consen  169 SKNADGLCTRLRD-PCSKQG---H----TKPQTPDLA---RDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKT  237 (468)
T ss_pred             hccCcchhhcccC-chhccC---C----CCCCCCccc---cCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceE
Confidence            5788999999998 543211   1    223333332   4679999999999999999999999999999988999999


Q ss_pred             ecCCCc
Q psy12538         85 LKMGSI   90 (93)
Q Consensus        85 l~~~~~   90 (93)
                      ++.+.+
T Consensus       238 ik~~~m  243 (468)
T KOG0197|consen  238 IKEGSM  243 (468)
T ss_pred             Eecccc
Confidence            988654

>KOG0193|consensus

Probab=98.45  E-value=1.4e-07  Score=71.51  Aligned_cols=42  Identities=36%  Similarity=0.828  Sum_probs=38.7

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS   89 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~~   89 (93)
                      .+|+|+.+.+.+...||+|.||.||+|.|.+  .||||.|+...
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~  426 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDD  426 (678)
T ss_pred             cccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCC
Confidence            6799999999999999999999999999998  89999997654

>KOG0194|consensus

Probab=97.84  E-value=2.5e-05  Score=58.36  Aligned_cols=44  Identities=41%  Similarity=0.777  Sum_probs=37.1

Q ss_pred             CCCceeEecCCceeeceEeeecccEEEEEEeCC--C---CeEEEEEecC
Q psy12538         44 TRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN--T---TPVAIKTLKM   87 (93)
Q Consensus        44 ~~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~--~---~~vavK~l~~   87 (93)
                      ..+.|++..+++.+.+.||+|+||+||+|.+..  .   ..||||..+.
T Consensus       148 ~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~  196 (474)
T KOG0194|consen  148 PRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKG  196 (474)
T ss_pred             cccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecc
Confidence            457799999999999999999999999999743  1   2389998875

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=97.77  E-value=3.5e-05  Score=51.70  Aligned_cols=41  Identities=63%  Similarity=1.164  Sum_probs=36.4

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      |++....+.+.+.||+|+||.||++...++..+++|.+...
T Consensus         1 ~~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~   41 (260)
T cd05067           1 WEVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQG   41 (260)
T ss_pred             CccchHHceeeeeeccCccceEEeeecCCCceEEEEEecCC
Confidence            77888889999999999999999999877788999998754

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=97.73  E-value=5.2e-05  Score=50.74  Aligned_cols=41  Identities=73%  Similarity=1.234  Sum_probs=36.4

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      |++++.++.+.+.||+|+||.||++..++...+++|.+...
T Consensus         1 ~~~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~   41 (261)
T cd05034           1 WEIPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG   41 (261)
T ss_pred             CccchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCC
Confidence            78888999999999999999999999877778999998653

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG0192|consensus

Probab=97.70  E-value=3.2e-05  Score=56.00  Aligned_cols=44  Identities=39%  Similarity=0.636  Sum_probs=38.7

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS   89 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~~   89 (93)
                      ..|+++...+.+.+.||+|+||.||+|.|++...||||.+....
T Consensus        34 ~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~   77 (362)
T KOG0192|consen   34 PEEEIDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPD   77 (362)
T ss_pred             cceecChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchh
Confidence            56999999999999999999999999999987669999997643

>KOG0196|consensus

Probab=97.65  E-value=3.3e-05  Score=60.71  Aligned_cols=43  Identities=44%  Similarity=0.643  Sum_probs=37.8

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeC----CCCeEEEEEecCCCc
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWN----NTTPVAIKTLKMGSI   90 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~----~~~~vavK~l~~~~~   90 (93)
                      .||+.+.+.+++.||.|.||+|++|+++    ....||||.||.+.+
T Consensus       624 kEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyt  670 (996)
T KOG0196|consen  624 KEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYT  670 (996)
T ss_pred             hhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCcc
Confidence            4899999999999999999999999984    356999999998654

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=97.63  E-value=7.4e-05  Score=50.16  Aligned_cols=41  Identities=80%  Similarity=1.463  Sum_probs=36.1

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      |++++..+.+.+.||+|+||.||+|.+.+...|++|.++..
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~   41 (261)
T cd05068           1 WEIDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPG   41 (261)
T ss_pred             CccchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCC
Confidence            77888899999999999999999999877678999998754

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG2052|consensus

Probab=97.57  E-value=6.1e-05  Score=55.93  Aligned_cols=34  Identities=35%  Similarity=0.822  Sum_probs=29.7

Q ss_pred             CCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|.||+||+|.|++ ..||||++..
T Consensus       211 rqI~L~e~IGkGRyGEVwrG~wrG-e~VAVKiF~s  244 (513)
T KOG2052|consen  211 RQIVLQEIIGKGRFGEVWRGRWRG-EDVAVKIFSS  244 (513)
T ss_pred             heeEEEEEecCccccceeeccccC-CceEEEEecc
Confidence            367778899999999999999998 4899999854

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=97.55  E-value=8.7e-05  Score=49.73  Aligned_cols=40  Identities=68%  Similarity=1.174  Sum_probs=35.4

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      |+++..++.+.+.||+|+||.||+|...+...+++|.+..
T Consensus         1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~   40 (261)
T cd05072           1 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKP   40 (261)
T ss_pred             CcCchHHeEEeeecCCcCCceEEEEEecCCceEEEEEccC
Confidence            7788888999999999999999999987777899998864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=97.54  E-value=0.00013  Score=48.94  Aligned_cols=40  Identities=60%  Similarity=1.029  Sum_probs=35.5

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      |++....+.+.+.||+|+||.||++.+.....+++|.+..
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~   40 (260)
T cd05073           1 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKP   40 (260)
T ss_pred             CcccccceeEEeEecCccceEEEEEEecCCccEEEEecCC
Confidence            7888999999999999999999999977666789998764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=97.50  E-value=6.9e-05  Score=52.40  Aligned_cols=40  Identities=40%  Similarity=0.639  Sum_probs=33.8

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeC------CCCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWN------NTTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~------~~~~vavK~l~~   87 (93)
                      |+++...+.+.+.||+|+||.||+|.+.      .+..||+|.++.
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~   47 (338)
T cd05102           2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKE   47 (338)
T ss_pred             cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccc
Confidence            8888889999999999999999999752      235799999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=97.48  E-value=0.00011  Score=49.51  Aligned_cols=40  Identities=68%  Similarity=1.106  Sum_probs=34.9

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      |+++...+.+.+.||+|+||.||+|.+.+...|++|.++.
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~   40 (262)
T cd05071           1 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP   40 (262)
T ss_pred             CCCChHHeeEeeecCCCCCCcEEEEEecCCceEEEEeccc
Confidence            6777888999999999999999999987766799999864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG1187|consensus

Probab=97.39  E-value=0.00026  Score=51.18  Aligned_cols=37  Identities=32%  Similarity=0.566  Sum_probs=31.1

Q ss_pred             cCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ..+|.-.+.||+|+||.||+|.+.++..||||.+...
T Consensus        74 T~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~  110 (361)
T KOG1187|consen   74 TNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSN  110 (361)
T ss_pred             HhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCC
Confidence            3455556799999999999999998889999988654

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=97.38  E-value=0.00021  Score=51.19  Aligned_cols=43  Identities=42%  Similarity=0.668  Sum_probs=35.7

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeC------CCCeEEEEEecC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWN------NTTPVAIKTLKM   87 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~------~~~~vavK~l~~   87 (93)
                      ...|++++.++.+.+.||+|+||.||++.+.      ....||+|.++.
T Consensus        27 ~~~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~   75 (375)
T cd05104          27 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKP   75 (375)
T ss_pred             ccccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccC
Confidence            3568999999999999999999999999742      245799999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=97.37  E-value=0.00017  Score=50.81  Aligned_cols=41  Identities=44%  Similarity=0.676  Sum_probs=34.4

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeC------CCCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWN------NTTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~------~~~~vavK~l~~~   88 (93)
                      |+++...+.+.+.||+|+||.||+|.+.      .+..||+|.++..
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~   48 (343)
T cd05103           2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG   48 (343)
T ss_pred             cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccC
Confidence            8888888999999999999999999752      2468999998653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=97.35  E-value=0.00027  Score=51.50  Aligned_cols=44  Identities=43%  Similarity=0.648  Sum_probs=37.1

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecCC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMG   88 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~~   88 (93)
                      ...|+++..++.+.+.||+|+||.||++++.+      ...||+|.++..
T Consensus        29 ~~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~   78 (401)
T cd05107          29 DSAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKST   78 (401)
T ss_pred             CCcceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCC
Confidence            34599999999999999999999999998743      347999999753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=97.33  E-value=0.00023  Score=47.71  Aligned_cols=41  Identities=66%  Similarity=1.227  Sum_probs=35.0

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      |++....+.+.+.||+|+||.||++...++..+++|.++..
T Consensus         1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~   41 (260)
T cd05070           1 WEIPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPG   41 (260)
T ss_pred             CCCchHHhhhhheeccccCceEEEEEecCCceeEEEEecCC
Confidence            67777788888999999999999999877778999988653

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG1026|consensus

Probab=97.27  E-value=5.6e-05  Score=59.11  Aligned_cols=45  Identities=33%  Similarity=0.448  Sum_probs=38.6

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecCCCc
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMGSI   90 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~~~~   90 (93)
                      ...++++.++.+.+.||+|.||.||+|+..+      .+.||||.|++.+.
T Consensus       479 ~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~  529 (774)
T KOG1026|consen  479 KVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAE  529 (774)
T ss_pred             ceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccccc
Confidence            4579999999999999999999999998633      57899999987654

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=97.26  E-value=0.0005  Score=50.00  Aligned_cols=44  Identities=43%  Similarity=0.635  Sum_probs=36.4

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecCC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMG   88 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~~   88 (93)
                      ...|++++..+.+.+.||+|+||.||+|.+..      ...||+|.++..
T Consensus        29 ~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~   78 (400)
T cd05105          29 DSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPT   78 (400)
T ss_pred             CCceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCC
Confidence            35699999999999999999999999998632      236899998653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=97.23  E-value=0.00043  Score=46.46  Aligned_cols=41  Identities=68%  Similarity=1.126  Sum_probs=33.8

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      |+++...+.+...||+|+||.||++.+.+...+++|.+...
T Consensus         1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~   41 (260)
T cd05069           1 WEIPRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPG   41 (260)
T ss_pred             CcCChHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccC
Confidence            66666777778899999999999999877667899987653

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=97.23  E-value=0.00017  Score=50.96  Aligned_cols=40  Identities=40%  Similarity=0.633  Sum_probs=33.8

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~   87 (93)
                      |+++...+.+.+.||+|+||.||+|...+      +..||+|.++.
T Consensus         2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~   47 (337)
T cd05054           2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKE   47 (337)
T ss_pred             cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccC
Confidence            88888889999999999999999997532      35799999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=97.17  E-value=0.00043  Score=47.27  Aligned_cols=40  Identities=43%  Similarity=0.826  Sum_probs=33.2

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~   87 (93)
                      |+++...+.+.+.||+|+||.||+|..++      ...||+|.++.
T Consensus         1 ~~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~   46 (288)
T cd05061           1 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE   46 (288)
T ss_pred             CcccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCC
Confidence            78888889999999999999999997642      34789998754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=97.17  E-value=0.00049  Score=45.35  Aligned_cols=30  Identities=23%  Similarity=0.245  Sum_probs=26.4

Q ss_pred             ceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         59 RKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ..||+|+||.||+|...++..||+|.++.+
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~   32 (190)
T cd05147           3 GCISTGKEANVYHATTANGEERAIKIYKTS   32 (190)
T ss_pred             CccccccceEEEEEECCCCCEEEEEEEEec
Confidence            479999999999999877789999999754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG4257|consensus

Probab=97.15  E-value=0.00031  Score=54.62  Aligned_cols=43  Identities=35%  Similarity=0.731  Sum_probs=36.7

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCC-----CCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-----TTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~-----~~~vavK~l~~~   88 (93)
                      ..+++.++.+.+...||.|.||.||+|.|.+     ...||||+.+.+
T Consensus       382 rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d  429 (974)
T KOG4257|consen  382 RNYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTD  429 (974)
T ss_pred             CcceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccC
Confidence            4689999999999999999999999999843     357899998764

>KOG1094|consensus

Probab=97.13  E-value=0.00028  Score=54.36  Aligned_cols=44  Identities=36%  Similarity=0.510  Sum_probs=39.3

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCCCcc
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID   91 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~~~~   91 (93)
                      -|+++..+.+.++||+|.||+|......+...||||+++.++..
T Consensus       533 ~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~  576 (807)
T KOG1094|consen  533 VEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATK  576 (807)
T ss_pred             hhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccch
Confidence            47888889999999999999999999888889999999987654

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=97.06  E-value=0.00061  Score=45.82  Aligned_cols=41  Identities=49%  Similarity=1.027  Sum_probs=34.7

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      |+++...+.+.+.||+|+||.||+|.+.. +..+++|.++..
T Consensus         1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~   42 (263)
T cd05052           1 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED   42 (263)
T ss_pred             CCCchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC
Confidence            67888888899999999999999999854 668899988643

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=97.06  E-value=0.00099  Score=50.30  Aligned_cols=38  Identities=32%  Similarity=0.612  Sum_probs=30.2

Q ss_pred             EecCCceeeceEeeecccEEEEEEe-----------------CCCCeEEEEEecC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLW-----------------NNTTPVAIKTLKM   87 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~-----------------~~~~~vavK~l~~   87 (93)
                      ....++.+.+.||+|+||.||+|.+                 ..++.||||.++.
T Consensus       142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~  196 (507)
T PLN03224        142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNM  196 (507)
T ss_pred             ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecc
Confidence            3566888899999999999999974                 1235799999854

>KOG0199|consensus

Probab=97.05  E-value=0.00018  Score=56.40  Aligned_cols=42  Identities=36%  Similarity=0.579  Sum_probs=35.0

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCC----CCeEEEEEecCCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKMGS   89 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~~~   89 (93)
                      --|+.+.+.+.+.||+|+||.|++|.|..    ...||||.|+.+.
T Consensus       105 clIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~  150 (1039)
T KOG0199|consen  105 CLIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDS  150 (1039)
T ss_pred             eeccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCc
Confidence            45777888889999999999999999953    4588999997654

>KOG0694|consensus

Probab=97.02  E-value=0.0027  Score=49.31  Aligned_cols=42  Identities=31%  Similarity=0.491  Sum_probs=34.6

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecCCCc
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSI   90 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~~~   90 (93)
                      .+...++.+...||+|+||.|+.+.+++ +..+|||.|+.+..
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~I  406 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDI  406 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccce
Confidence            3455688889999999999999999865 66899999987543

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=97.02  E-value=0.0008  Score=45.45  Aligned_cols=39  Identities=46%  Similarity=0.806  Sum_probs=31.1

Q ss_pred             EecCCceeeceEeeecccEEEEEEeC----CCCeEEEEEecCC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWN----NTTPVAIKTLKMG   88 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~----~~~~vavK~l~~~   88 (93)
                      ++..++.+.+.||+|+||.||+|.+.    ....||+|.++..
T Consensus         2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~   44 (266)
T cd05064           2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAG   44 (266)
T ss_pred             CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCC
Confidence            45567788899999999999999863    2458899998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG1095|consensus

Probab=97.00  E-value=0.00077  Score=54.44  Aligned_cols=40  Identities=43%  Similarity=0.775  Sum_probs=33.3

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecCC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMG   88 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~~   88 (93)
                      ++.+.++++...||+|+||.||+|.+.+      ...||+|.++..
T Consensus       688 ~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~  733 (1025)
T KOG1095|consen  688 EVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL  733 (1025)
T ss_pred             cCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc
Confidence            4668889999999999999999999843      235899999764

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=96.99  E-value=0.00095  Score=44.63  Aligned_cols=37  Identities=46%  Similarity=0.808  Sum_probs=30.6

Q ss_pred             cCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      .+.+.+.+.||+|+||.||++.+.....+++|.++..
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~   39 (256)
T cd05114           3 PSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG   39 (256)
T ss_pred             HHHcEEeeEecCCcCceEEEEEeccCceEEEEecccC
Confidence            3456777889999999999999987778999987643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0659|consensus

Probab=96.90  E-value=0.00089  Score=47.20  Aligned_cols=36  Identities=33%  Similarity=0.560  Sum_probs=29.0

Q ss_pred             ceeeceEeeecccEEEEEEe-CCCCeEEEEEecCCCc
Q psy12538         55 LKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMGSI   90 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~~~   90 (93)
                      +...+.+|+|.||.||+|+. ..++.||||+++.+..
T Consensus         4 Y~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~   40 (318)
T KOG0659|consen    4 YEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNA   40 (318)
T ss_pred             hhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccc
Confidence            33456899999999999995 5578999999987543

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=96.89  E-value=0.0012  Score=44.46  Aligned_cols=41  Identities=46%  Similarity=0.861  Sum_probs=33.9

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~~   88 (93)
                      |+++..++.+.+.||+|+||.||+|....      ...+++|.+...
T Consensus         1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~   47 (277)
T cd05032           1 WELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNEN   47 (277)
T ss_pred             CccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCc
Confidence            67888889999999999999999998743      257899998643

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=96.89  E-value=0.00042  Score=46.30  Aligned_cols=41  Identities=61%  Similarity=1.083  Sum_probs=34.4

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ||....++.+.+.||.|+||.||+|.+.++..+++|.++..
T Consensus         1 ~~~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~   41 (261)
T cd05148           1 WERPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSD   41 (261)
T ss_pred             CcCcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEecccc
Confidence            55566778888899999999999999877788999998653

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>PTZ00284 protein kinase; Provisional

Probab=96.87  E-value=0.0022  Score=47.23  Aligned_cols=36  Identities=28%  Similarity=0.419  Sum_probs=29.4

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ...+.+.+.||+|+||.||++... .+..||||.++.
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~  164 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRN  164 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEec
Confidence            356777889999999999999864 467899999853

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=96.86  E-value=0.0018  Score=42.33  Aligned_cols=31  Identities=16%  Similarity=0.226  Sum_probs=26.7

Q ss_pred             eceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         58 VRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        58 ~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ...||+|+||.||+|...++..||||.++..
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~   32 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTS   32 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcC
Confidence            3479999999999999777789999998764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0580|consensus

Probab=96.83  E-value=0.0015  Score=45.45  Aligned_cols=40  Identities=33%  Similarity=0.553  Sum_probs=32.5

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..|.++  +|.++..||.|.||.||.|+.+ +...||+|++..
T Consensus        17 ~~~~l~--dfeigr~LgkgkFG~vYlarekks~~IvalKVlfK   57 (281)
T KOG0580|consen   17 KTWTLD--DFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFK   57 (281)
T ss_pred             cccchh--hccccccccCCccccEeEeeeccCCcEEEEeeeeH
Confidence            457665  6778889999999999999974 467889999853

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=96.83  E-value=0.0017  Score=43.36  Aligned_cols=40  Identities=38%  Similarity=0.692  Sum_probs=33.0

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      |.+...++.+.+.||+|.||.||++...+ ..+++|.++..
T Consensus         1 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~-~~v~iK~~~~~   40 (256)
T cd05039           1 WAINSKELKLGATIGKGEFGDVMLGDYRG-QKVAVKCLKDD   40 (256)
T ss_pred             CccChhhccceeeeecCCCceEEEEEecC-cEEEEEEeccc
Confidence            45566778888999999999999999775 68999998654

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=96.83  E-value=0.0013  Score=47.12  Aligned_cols=44  Identities=41%  Similarity=0.699  Sum_probs=35.8

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeC------CCCeEEEEEecCC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWN------NTTPVAIKTLKMG   88 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~------~~~~vavK~l~~~   88 (93)
                      ...|.++..++.+.+.||+|+||.||++.+.      ....||+|.++..
T Consensus        30 ~~~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~   79 (374)
T cd05106          30 NEKWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKAS   79 (374)
T ss_pred             cccccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCC
Confidence            3568888889999999999999999998852      2347999998643

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0200|consensus

Probab=96.80  E-value=0.0014  Score=50.27  Aligned_cols=44  Identities=41%  Similarity=0.626  Sum_probs=37.6

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeC--------CCCeEEEEEecCCCc
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWN--------NTTPVAIKTLKMGSI   90 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~--------~~~~vavK~l~~~~~   90 (93)
                      .||++++++.+.+.+|+|.||.|++|...        ....||||.++..+.
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~  341 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS  341 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccC
Confidence            69999999999999999999999999853        146899999987554

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=96.79  E-value=0.0025  Score=48.62  Aligned_cols=39  Identities=23%  Similarity=0.421  Sum_probs=31.5

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeCC-----CCeEEEEEecC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWNN-----TTPVAIKTLKM   87 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~~-----~~~vavK~l~~   87 (93)
                      ....+++.+.+.||+|+||.||+|.+..     +..+|+|.+..
T Consensus       128 ~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~  171 (566)
T PLN03225        128 SFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATE  171 (566)
T ss_pred             CCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecc
Confidence            3455678888999999999999999743     47899998753

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=96.78  E-value=0.0024  Score=42.54  Aligned_cols=37  Identities=49%  Similarity=0.923  Sum_probs=30.1

Q ss_pred             cCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ...+.+.+.||+|+||.||++.+..+..+++|.++..
T Consensus         3 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~   39 (256)
T cd05112           3 PSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG   39 (256)
T ss_pred             hhHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC
Confidence            3456777899999999999999875668899988653

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=96.77  E-value=0.0019  Score=43.35  Aligned_cols=37  Identities=41%  Similarity=0.603  Sum_probs=29.7

Q ss_pred             cCCceeeceEeeecccEEEEEEeCC----CCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~~   88 (93)
                      .+++.+.+.||+|+||.||+|.+..    ...|++|.++..
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~   43 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAG   43 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCC
Confidence            4567788899999999999999842    357899988653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG0595|consensus

Probab=96.76  E-value=0.0014  Score=48.32  Aligned_cols=35  Identities=34%  Similarity=0.571  Sum_probs=27.6

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ++.+...||+|+|+.||+|+++ .+..||||.+...
T Consensus        11 ~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~   46 (429)
T KOG0595|consen   11 DYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKK   46 (429)
T ss_pred             cceehhhccCcceEEEEEeEeccCCceEEeeeehhh
Confidence            3444556999999999999984 3679999998544

>cd05119 RIO RIO kinase family, catalytic domain

Probab=96.75  E-value=0.002  Score=41.40  Aligned_cols=31  Identities=29%  Similarity=0.502  Sum_probs=26.3

Q ss_pred             eceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         58 VRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        58 ~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      .+.||+|+||.||++...++..||||.++..
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~   32 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTG   32 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecC
Confidence            4579999999999999876789999988653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=96.74  E-value=0.0027  Score=43.81  Aligned_cols=43  Identities=37%  Similarity=0.550  Sum_probs=34.8

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCC--------CCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN--------TTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~--------~~~vavK~l~~~   88 (93)
                      ..|++....+.+.+.||+|+||.||++...+        ...+|+|.++..
T Consensus        11 ~~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~   61 (307)
T cd05098          11 PRWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSD   61 (307)
T ss_pred             CcceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCC
Confidence            4588888899999999999999999998632        246899988643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=96.72  E-value=0.0034  Score=43.77  Aligned_cols=33  Identities=36%  Similarity=0.493  Sum_probs=27.4

Q ss_pred             ceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||+|...+ +..+|+|.++.
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~   35 (324)
T cd05587           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKK   35 (324)
T ss_pred             ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEH
Confidence            5567899999999999999754 56899998864

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=96.72  E-value=0.0032  Score=43.11  Aligned_cols=42  Identities=24%  Similarity=0.484  Sum_probs=35.3

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      ..|.++..++.+.+.||+|.||.||++.+.. +..+|+|.++.
T Consensus         8 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~   50 (296)
T cd06618           8 QKYPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRR   50 (296)
T ss_pred             eeccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEec
Confidence            4466777788889999999999999999864 67899999864

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=96.71  E-value=0.0036  Score=44.78  Aligned_cols=34  Identities=32%  Similarity=0.394  Sum_probs=27.9

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||++... .+..+|+|.+..
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~   36 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRK   36 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEH
Confidence            4566788999999999999874 467899999854

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=96.71  E-value=0.0019  Score=43.72  Aligned_cols=40  Identities=45%  Similarity=0.838  Sum_probs=32.7

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~   87 (93)
                      |++..+++.+.+.||+|+||.||+|.+.+      ...+|+|.+..
T Consensus         1 ~~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~   46 (277)
T cd05062           1 WEVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNE   46 (277)
T ss_pred             CcccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccc
Confidence            67778888889999999999999998642      34689998754

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=96.69  E-value=0.0032  Score=42.53  Aligned_cols=33  Identities=39%  Similarity=0.907  Sum_probs=27.2

Q ss_pred             eeeceEeeecccEEEEEEeC-----CCCeEEEEEecCC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWN-----NTTPVAIKTLKMG   88 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~-----~~~~vavK~l~~~   88 (93)
                      .+.+.||+|.||.||+|.+.     ....|+||.++..
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~   39 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS   39 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc
Confidence            45678999999999999987     2568999999653

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=96.69  E-value=0.0027  Score=43.62  Aligned_cols=38  Identities=45%  Similarity=0.516  Sum_probs=28.8

Q ss_pred             ecCCceeeceEeeecccEEEEEEeCC-----------------CCeEEEEEecCC
Q psy12538         51 DRNSLKFVRKLGSGQFGEVWEGLWNN-----------------TTPVAIKTLKMG   88 (93)
Q Consensus        51 ~~~~~~~~~~iG~G~fG~V~~g~~~~-----------------~~~vavK~l~~~   88 (93)
                      +...+.+.+.||+|+||.||++.++.                 ...||+|.+...
T Consensus         3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~   57 (304)
T cd05096           3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD   57 (304)
T ss_pred             chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC
Confidence            34566778899999999999998632                 236899988653

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=96.69  E-value=0.004  Score=43.97  Aligned_cols=34  Identities=26%  Similarity=0.375  Sum_probs=28.2

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++... .+..||+|.++.
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~   36 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRK   36 (364)
T ss_pred             CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEH
Confidence            4667789999999999999974 467899999863

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0605|consensus

Probab=96.68  E-value=0.0013  Score=49.80  Aligned_cols=40  Identities=25%  Similarity=0.424  Sum_probs=32.0

Q ss_pred             EecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecCCC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGS   89 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~~   89 (93)
                      +...+|.+.+.||+|+||+||.++-++ +..+|.|+|+...
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~  178 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSE  178 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHH
Confidence            344577778899999999999998654 6788999997543

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=96.68  E-value=0.0023  Score=42.93  Aligned_cols=36  Identities=47%  Similarity=0.817  Sum_probs=30.0

Q ss_pred             CCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      .++.+.+.||+|+||.||.+.+.+...+|+|.++..
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~   39 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG   39 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC
Confidence            456677899999999999999877667999988654

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=96.66  E-value=0.004  Score=43.39  Aligned_cols=33  Identities=36%  Similarity=0.493  Sum_probs=27.3

Q ss_pred             ceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||++.... +..+|+|.++.
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~   35 (323)
T cd05616           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKK   35 (323)
T ss_pred             ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            4567789999999999998754 56899998864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0667|consensus

Probab=96.62  E-value=0.0025  Score=48.81  Aligned_cols=34  Identities=32%  Similarity=0.437  Sum_probs=28.3

Q ss_pred             ceeeceEeeecccEEEEEEe-CCCCeEEEEEecCC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMG   88 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~   88 (93)
                      +.+.+.||+|.||+|.++.- ..++.||||+++..
T Consensus       188 Y~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~  222 (586)
T KOG0667|consen  188 YEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK  222 (586)
T ss_pred             EEEEEEecccccceeEEEEecCCCcEEEEEeeccC
Confidence            34568999999999999985 45789999999753

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=96.62  E-value=0.0047  Score=41.71  Aligned_cols=35  Identities=26%  Similarity=0.391  Sum_probs=28.8

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ++.+.+.||+|+||.||++... ++..||+|.++..
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~   37 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRAT   37 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecC
Confidence            4567788999999999999975 4679999988653

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=96.59  E-value=0.0052  Score=42.93  Aligned_cols=34  Identities=24%  Similarity=0.493  Sum_probs=28.3

Q ss_pred             CceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++.... +..||+|.++.
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~   36 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKK   36 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEH
Confidence            45667899999999999999753 67899999863

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG3653|consensus

Probab=96.58  E-value=0.00082  Score=50.38  Aligned_cols=34  Identities=32%  Similarity=0.682  Sum_probs=29.0

Q ss_pred             CCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|.||.||+|.+.+ +.||||++..
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~~-~~VAVKifp~  243 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLDN-RLVAVKIFPE  243 (534)
T ss_pred             CchhhHHHhhcCccceeehhhccC-ceeEEEecCH
Confidence            346667889999999999999987 6999999864

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=96.57  E-value=0.0031  Score=44.14  Aligned_cols=42  Identities=36%  Similarity=0.544  Sum_probs=34.1

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCC--------CCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN--------TTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~--------~~~vavK~l~~   87 (93)
                      ..|++....+.+.+.||+|+||.||+++..+        ...+++|.++.
T Consensus         5 ~~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~   54 (334)
T cd05100           5 PKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKD   54 (334)
T ss_pred             cccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccc
Confidence            5699998889999999999999999997521        23688998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=96.54  E-value=0.0038  Score=42.47  Aligned_cols=42  Identities=38%  Similarity=0.628  Sum_probs=35.0

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~   87 (93)
                      ..|+++..++.+.+.||+|+||.||++.+..      ...+++|.+..
T Consensus         5 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~   52 (293)
T cd05053           5 PEWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKD   52 (293)
T ss_pred             cccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccC
Confidence            4588999999999999999999999998743      35788998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=96.53  E-value=0.0036  Score=42.34  Aligned_cols=38  Identities=29%  Similarity=0.517  Sum_probs=30.9

Q ss_pred             EecCCceeeceEeeecccEEEEEEeCC-----CCeEEEEEecC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWNN-----TTPVAIKTLKM   87 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~~-----~~~vavK~l~~   87 (93)
                      +.+.++.+.+.||+|+||.||+|.+..     ...|++|.++.
T Consensus         3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~   45 (280)
T cd05043           3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKD   45 (280)
T ss_pred             cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccC
Confidence            445677788899999999999999754     56888998764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>PTZ00036 glycogen synthase kinase; Provisional

Probab=96.53  E-value=0.0055  Score=45.01  Aligned_cols=37  Identities=32%  Similarity=0.498  Sum_probs=29.8

Q ss_pred             ecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         51 DRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        51 ~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ....+.+.+.||+|+||.||+|... .+..||+|.+..
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~  101 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQ  101 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEec
Confidence            3446777889999999999999974 467899998753

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=96.52  E-value=0.0062  Score=42.72  Aligned_cols=34  Identities=26%  Similarity=0.406  Sum_probs=27.8

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++... .+..+|+|.+..
T Consensus         2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~   36 (331)
T cd05624           2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNK   36 (331)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeH
Confidence            4667789999999999999875 356899998753

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=96.51  E-value=0.0043  Score=43.00  Aligned_cols=36  Identities=47%  Similarity=0.866  Sum_probs=27.6

Q ss_pred             cCCceeeceEeeecccEEEEEEeCC-CC----eEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNN-TT----PVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~-~~----~vavK~l~~   87 (93)
                      ..++...+.||+|+||.||+|.+.. +.    .||+|.++.
T Consensus         6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~   46 (316)
T cd05108           6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE   46 (316)
T ss_pred             hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccc
Confidence            3456677899999999999999742 22    489999864

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0201|consensus

Probab=96.50  E-value=0.0026  Score=47.27  Aligned_cols=32  Identities=34%  Similarity=0.633  Sum_probs=26.5

Q ss_pred             eceEeeecccEEEEEEeC-CCCeEEEEEecCCC
Q psy12538         58 VRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMGS   89 (93)
Q Consensus        58 ~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~~   89 (93)
                      .+.||+|+||.||+|... ....||+|++....
T Consensus        18 ~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~   50 (467)
T KOG0201|consen   18 LELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE   50 (467)
T ss_pred             chhccccccceeeeeeeccccceEEEEEechhh
Confidence            368999999999999974 46789999997644

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=96.50  E-value=0.0062  Score=42.57  Aligned_cols=33  Identities=36%  Similarity=0.494  Sum_probs=27.2

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||++... ++..||+|.++.
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~   35 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKK   35 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEH
Confidence            456778999999999999875 467899998863

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=96.48  E-value=0.0066  Score=42.52  Aligned_cols=33  Identities=30%  Similarity=0.480  Sum_probs=27.4

Q ss_pred             CceeeceEeeecccEEEEEEeCC-CCeEEEEEec
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLK   86 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~   86 (93)
                      ++.+.+.||+|+||.||++..+. +..+|+|.+.
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~   35 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILN   35 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEe
Confidence            46677899999999999999754 5678999874

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>PRK09188 serine/threonine protein kinase; Provisional

Probab=96.46  E-value=0.0057  Score=44.49  Aligned_cols=34  Identities=18%  Similarity=0.144  Sum_probs=27.6

Q ss_pred             CCceeeceEeeecccEEEEEEeC--CCCeEEEEEec
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN--NTTPVAIKTLK   86 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~--~~~~vavK~l~   86 (93)
                      ..+.+.+.||+|+||.||+|++.  ++..+|||.+.
T Consensus        18 ~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~   53 (365)
T PRK09188         18 ARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRV   53 (365)
T ss_pred             CCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEec
Confidence            45677889999999999999874  45678999864

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=96.46  E-value=0.0042  Score=41.48  Aligned_cols=39  Identities=33%  Similarity=0.748  Sum_probs=32.4

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      |.++..++.+.+.||+|+||.||++...+ ..+++|.++.
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~k~~~~   39 (256)
T cd05082           1 WALNMKELKLLQTIGKGEFGDVMLGDYRG-NKVAVKCIKN   39 (256)
T ss_pred             CCccHHhCeeeeeecccCCCeEEEEEEcC-CcEEEEEeCC
Confidence            55667788888999999999999998775 5789998764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=96.45  E-value=0.0073  Score=42.25  Aligned_cols=34  Identities=29%  Similarity=0.545  Sum_probs=28.2

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++... .+..||+|.++.
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~   36 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRK   36 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEH
Confidence            4566789999999999999975 467899999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=96.45  E-value=0.0086  Score=39.70  Aligned_cols=34  Identities=35%  Similarity=0.621  Sum_probs=27.6

Q ss_pred             eeeceEeeecccEEEEEEeCC-CCeEEEEEecCCC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGS   89 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~~   89 (93)
                      .+.+.||+|+||.||++.... +..+|+|.+....
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~   36 (260)
T PF00069_consen    2 RLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSE   36 (260)
T ss_dssp             EEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTT
T ss_pred             EEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccc
Confidence            356789999999999999865 4579999987643

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=96.45  E-value=0.0029  Score=42.34  Aligned_cols=37  Identities=46%  Similarity=0.822  Sum_probs=30.1

Q ss_pred             cCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ..++.+.+.||+|.||.||++.++....+++|.+...
T Consensus         3 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~   39 (256)
T cd05059           3 PSELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREG   39 (256)
T ss_pred             hHHcchhhhhccCCCceEEEeEecCCccEEEEEeccC
Confidence            3456677899999999999999877668899988643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=96.44  E-value=0.007  Score=45.26  Aligned_cols=37  Identities=30%  Similarity=0.397  Sum_probs=30.2

Q ss_pred             cCCceeeceEeeecccEEEEEEe-CCCCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~   88 (93)
                      ...+.+.+.||+|+||.||++.. .++..||+|.++..
T Consensus        31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~   68 (496)
T PTZ00283         31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDME   68 (496)
T ss_pred             CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecc
Confidence            35677788999999999999986 34679999998643

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=96.44  E-value=0.0037  Score=46.28  Aligned_cols=30  Identities=23%  Similarity=0.376  Sum_probs=27.4

Q ss_pred             ceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         59 RKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      +.||+|++|+||+|+++++..||||+++++
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~  152 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPG  152 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCC
Confidence            579999999999999988899999999765

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=96.43  E-value=0.0074  Score=42.30  Aligned_cols=33  Identities=27%  Similarity=0.419  Sum_probs=27.6

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      ++.+.+.||+|+||.||++... .+..+|+|.+.
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~   35 (331)
T cd05597           2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILN   35 (331)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEE
Confidence            4567789999999999999874 36789999985

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=96.43  E-value=0.0072  Score=42.89  Aligned_cols=34  Identities=26%  Similarity=0.363  Sum_probs=27.9

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++... .+..+|+|.++.
T Consensus         2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~   36 (363)
T cd05628           2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRK   36 (363)
T ss_pred             CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence            4566789999999999999864 367899999853

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=96.43  E-value=0.0073  Score=43.10  Aligned_cols=34  Identities=32%  Similarity=0.391  Sum_probs=27.7

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||++... .+..+|+|.+..
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~   36 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRK   36 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeH
Confidence            3566788999999999999864 467899999853

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>PHA02882 putative serine/threonine kinase; Provisional

Probab=96.41  E-value=0.0056  Score=42.14  Aligned_cols=33  Identities=24%  Similarity=0.377  Sum_probs=24.2

Q ss_pred             cCCceeeceEeeecccEEEEEEeCCC----CeEEEEE
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNNT----TPVAIKT   84 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~~----~~vavK~   84 (93)
                      ...+.+.+.||+|+||.||+|.+.+.    ..+++|.
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~   47 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKI   47 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEe
Confidence            34566677999999999999997542    3455554

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=96.41  E-value=0.0071  Score=41.31  Aligned_cols=33  Identities=33%  Similarity=0.408  Sum_probs=26.6

Q ss_pred             ceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      +...+.||+|+||.||++.. .++..+|+|.+..
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~   35 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEK   35 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeH
Confidence            34567899999999999986 4567899998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=96.40  E-value=0.0071  Score=42.36  Aligned_cols=35  Identities=31%  Similarity=0.417  Sum_probs=29.3

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .++.+.+.||+|+||.||++.... +..+|+|.++.
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~   53 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKK   53 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEH
Confidence            467778899999999999999854 67899998853

>KOG0597|consensus

Probab=96.38  E-value=0.0016  Score=50.20  Aligned_cols=35  Identities=29%  Similarity=0.489  Sum_probs=28.3

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      +++++.+.||+|+||.||+|+-++ ...||+|.+..
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K   37 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDK   37 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehh
Confidence            356677889999999999999654 56889999853

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=96.38  E-value=0.0081  Score=42.71  Aligned_cols=33  Identities=30%  Similarity=0.371  Sum_probs=27.5

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      .+.+.+.||+|+||.||+++.. .+..+|+|.+.
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~   35 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLR   35 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEc
Confidence            4667789999999999999864 36789999885

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=96.37  E-value=0.0047  Score=40.40  Aligned_cols=33  Identities=24%  Similarity=0.395  Sum_probs=27.7

Q ss_pred             ceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      ..+.+.||+|+||.||++...++..|+||.++.
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~   49 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRL   49 (198)
T ss_pred             hhcCCccccCcceEEEEEEcCCCCEEEEEEEec
Confidence            344678999999999999987778999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=96.34  E-value=0.0096  Score=40.39  Aligned_cols=34  Identities=26%  Similarity=0.395  Sum_probs=28.1

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||+++.+ ++..+|+|.++.
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~   36 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKD   36 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEec
Confidence            3566788999999999999985 467899998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=96.31  E-value=0.0084  Score=41.14  Aligned_cols=34  Identities=24%  Similarity=0.373  Sum_probs=27.9

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++... .+..+|+|.++.
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~   36 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAI   36 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEH
Confidence            4566788999999999999975 467899999853

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=96.30  E-value=0.0098  Score=42.01  Aligned_cols=36  Identities=25%  Similarity=0.332  Sum_probs=29.1

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..++.+.+.||+|+||.||++... ++..||+|.+..
T Consensus        73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~  109 (353)
T PLN00034         73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYG  109 (353)
T ss_pred             HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEec
Confidence            345666788999999999999874 467899999854

>KOG0658|consensus

Probab=96.29  E-value=0.0086  Score=43.51  Aligned_cols=32  Identities=38%  Similarity=0.565  Sum_probs=25.9

Q ss_pred             eeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .-.+.+|+|+||.||+|.+.. ...||||+..+
T Consensus        27 ~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~   59 (364)
T KOG0658|consen   27 EAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQ   59 (364)
T ss_pred             EeeEEEeecccceEEEEEEcCCCceeEEEEecC
Confidence            345689999999999999854 57899998744

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=96.27  E-value=0.01  Score=40.83  Aligned_cols=35  Identities=31%  Similarity=0.592  Sum_probs=28.6

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .++.+.+.||+|+||.||++... .+..+|+|.++.
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~   40 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRL   40 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecc
Confidence            35666789999999999999975 467899999864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=96.24  E-value=0.014  Score=39.56  Aligned_cols=33  Identities=24%  Similarity=0.444  Sum_probs=26.9

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||++... ++..+|+|.++.
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~   35 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV   35 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEecc
Confidence            345678999999999999875 467899998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=96.23  E-value=0.01  Score=40.33  Aligned_cols=33  Identities=24%  Similarity=0.452  Sum_probs=26.5

Q ss_pred             ceeeceEeeecccEEEEEEeC--CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN--NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~--~~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||++...  ++..||+|.++.
T Consensus         3 Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~   37 (290)
T cd07862           3 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV   37 (290)
T ss_pred             cceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEec
Confidence            456678999999999999863  356789998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=96.22  E-value=0.0077  Score=41.96  Aligned_cols=29  Identities=38%  Similarity=0.504  Sum_probs=24.1

Q ss_pred             ceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      +.||+|+||.||++.... +..||+|.++.
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~   30 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKK   30 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            368999999999999754 56899998864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=96.22  E-value=0.014  Score=39.97  Aligned_cols=35  Identities=26%  Similarity=0.512  Sum_probs=28.4

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.+.+.||+|+||.||+|... .+..||+|.++.
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~   40 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRL   40 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecc
Confidence            34666789999999999999864 467899998864

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=96.21  E-value=0.011  Score=42.10  Aligned_cols=34  Identities=32%  Similarity=0.361  Sum_probs=27.6

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++... .+..+|+|.+..
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~   36 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLK   36 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEH
Confidence            4566789999999999999864 467899998753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=96.20  E-value=0.011  Score=40.75  Aligned_cols=35  Identities=26%  Similarity=0.515  Sum_probs=28.2

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.+.+.||+|+||.||+|+.. .+..+|+|.++.
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~   41 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRL   41 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeec
Confidence            34666788999999999999875 356899998864

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=96.20  E-value=0.0097  Score=42.14  Aligned_cols=39  Identities=36%  Similarity=0.675  Sum_probs=31.1

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCC--CCeEEEEEec
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN--TTPVAIKTLK   86 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~--~~~vavK~l~   86 (93)
                      +.+...++.+.+.||+|+||.||+|.+..  ...||+|.+.
T Consensus        25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~   65 (340)
T PTZ00426         25 NKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFE   65 (340)
T ss_pred             CCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEE
Confidence            45556678888899999999999998754  3578999874

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=96.20  E-value=0.011  Score=41.27  Aligned_cols=32  Identities=34%  Similarity=0.509  Sum_probs=26.5

Q ss_pred             eeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.||+|+||.||++... .+..||+|.++.
T Consensus         2 ~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~   34 (324)
T cd05589           2 RCLAVLGRGHFGKVLLAEYKKTGELYAIKALKK   34 (324)
T ss_pred             eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEH
Confidence            35678999999999999875 467899999863

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=96.20  E-value=0.0075  Score=43.13  Aligned_cols=39  Identities=23%  Similarity=0.381  Sum_probs=32.3

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      +++...++.+.+.||+|+||.||++... .+..+|+|.++
T Consensus        38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~   77 (370)
T cd05596          38 LRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLS   77 (370)
T ss_pred             CCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEE
Confidence            5566677888899999999999999874 46789999985

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=96.19  E-value=0.0065  Score=41.74  Aligned_cols=42  Identities=36%  Similarity=0.552  Sum_probs=33.2

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC--------CCCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN--------NTTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~--------~~~~vavK~l~~   87 (93)
                      ..|++...++.+...||+|+||.||++.+.        ....+++|.++.
T Consensus         8 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~   57 (304)
T cd05101           8 PRWEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKD   57 (304)
T ss_pred             CcccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccc
Confidence            347888888888999999999999999752        134688998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=96.18  E-value=0.0067  Score=42.01  Aligned_cols=42  Identities=38%  Similarity=0.571  Sum_probs=34.1

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC--------CCCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN--------NTTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~--------~~~~vavK~l~~   87 (93)
                      ..|.++...+.+.+.||+|+||.||++...        ....+++|.++.
T Consensus         5 ~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~   54 (314)
T cd05099           5 PKWEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKD   54 (314)
T ss_pred             ccccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCC
Confidence            468888899999999999999999998752        134688888764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=96.18  E-value=0.0088  Score=40.21  Aligned_cols=39  Identities=41%  Similarity=0.749  Sum_probs=30.5

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeCC----CCeEEEEEecC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKM   87 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~   87 (93)
                      ++...++.+.+.||+|+||.||+|.+.+    ...+++|....
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~   44 (270)
T cd05056           2 EIQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKN   44 (270)
T ss_pred             eechhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCC
Confidence            4556678888999999999999998643    34688888754

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>smart00090 RIO RIO-like kinase

Probab=96.18  E-value=0.0063  Score=41.51  Aligned_cols=35  Identities=17%  Similarity=0.206  Sum_probs=28.9

Q ss_pred             CceeeceEeeecccEEEEEE--eCCCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGL--WNNTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~--~~~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||+|.  ..++..||+|.++..
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~   65 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTG   65 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcC
Confidence            34567889999999999998  456789999998754

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=96.14  E-value=0.0011  Score=40.83  Aligned_cols=30  Identities=23%  Similarity=0.331  Sum_probs=27.0

Q ss_pred             ceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         59 RKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      +.|++|+.|+||+|++++++.||||..+++
T Consensus        17 ~PlasASiaQVh~a~l~~g~~VaVKV~rP~   46 (119)
T PF03109_consen   17 EPLASASIAQVHRARLKDGEEVAVKVQRPG   46 (119)
T ss_pred             chhhheehhhheeeeecccchhhhhhcchH
Confidence            479999999999999998899999998764

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=96.13  E-value=0.014  Score=40.72  Aligned_cols=34  Identities=26%  Similarity=0.301  Sum_probs=28.1

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++... .+..+|+|.++.
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~   36 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKK   36 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEH
Confidence            4567789999999999999874 467899999864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=96.12  E-value=0.01  Score=42.53  Aligned_cols=39  Identities=26%  Similarity=0.371  Sum_probs=32.3

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEec
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLK   86 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~   86 (93)
                      +++....+.+.+.||+|+||.||++.... +..+|+|.+.
T Consensus        38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~   77 (371)
T cd05622          38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLS   77 (371)
T ss_pred             cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEE
Confidence            55666788888999999999999999753 6788999875

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=96.12  E-value=0.012  Score=39.30  Aligned_cols=32  Identities=31%  Similarity=0.534  Sum_probs=26.8

Q ss_pred             eeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      ...+.||+|.||.||+|....+..+|+|.++.
T Consensus         3 ~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~   34 (265)
T cd06631           3 TKGEVLGKGAYGTVYCGLTNQGQLIAVKQVEL   34 (265)
T ss_pred             cccceEeccCCeEEEEEEEcCCCeEEEEEeec
Confidence            34568999999999999876677899998864

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG1025|consensus

Probab=96.11  E-value=0.006  Score=48.94  Aligned_cols=31  Identities=48%  Similarity=0.832  Sum_probs=25.4

Q ss_pred             eceEeeecccEEEEEEe-C-C---CCeEEEEEecCC
Q psy12538         58 VRKLGSGQFGEVWEGLW-N-N---TTPVAIKTLKMG   88 (93)
Q Consensus        58 ~~~iG~G~fG~V~~g~~-~-~---~~~vavK~l~~~   88 (93)
                      .++||+|+||.||+|.| + +   ..+||+|.+...
T Consensus       701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~  736 (1177)
T KOG1025|consen  701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF  736 (1177)
T ss_pred             hceeccccceeEEeeeEecCCceecceeEEEEeecc
Confidence            46899999999999998 2 2   568999998653

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=96.11  E-value=0.0063  Score=41.27  Aligned_cols=37  Identities=35%  Similarity=0.608  Sum_probs=29.3

Q ss_pred             ecCCceeeceEeeecccEEEEEEeC-----CCCeEEEEEecC
Q psy12538         51 DRNSLKFVRKLGSGQFGEVWEGLWN-----NTTPVAIKTLKM   87 (93)
Q Consensus        51 ~~~~~~~~~~iG~G~fG~V~~g~~~-----~~~~vavK~l~~   87 (93)
                      +...+.+.+.||+|+||.||+|.+.     ....+++|.++.
T Consensus         3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~   44 (283)
T cd05090           3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKD   44 (283)
T ss_pred             ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccC
Confidence            4456778889999999999999852     346889998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=96.08  E-value=0.014  Score=41.28  Aligned_cols=34  Identities=26%  Similarity=0.355  Sum_probs=27.7

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++... .+..+|+|.++.
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~   36 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRK   36 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence            3556778999999999999875 467899999853

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=96.08  E-value=0.012  Score=41.78  Aligned_cols=33  Identities=30%  Similarity=0.471  Sum_probs=27.0

Q ss_pred             ceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||++.. .++..||+|.+..
T Consensus         2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   35 (372)
T cd07853           2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPN   35 (372)
T ss_pred             CcccceeeeCCCEEEEEEEECCCCCEEEEEeccc
Confidence            45677899999999999986 3567899998854

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=96.05  E-value=0.014  Score=39.85  Aligned_cols=33  Identities=33%  Similarity=0.386  Sum_probs=26.4

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +...+.||+|+||.||++... .+..+|+|.+..
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~   35 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEK   35 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeeh
Confidence            344568999999999999874 467899998854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=96.03  E-value=0.0087  Score=40.50  Aligned_cols=36  Identities=50%  Similarity=0.877  Sum_probs=27.3

Q ss_pred             cCCceeeceEeeecccEEEEEEeCC-CC----eEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNN-TT----PVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~-~~----~vavK~l~~   87 (93)
                      ...+.+.+.||+|+||.||+|.+.. +.    .||+|.++.
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~   46 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRE   46 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecC
Confidence            3456677899999999999998732 22    478998864

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0593|consensus

Probab=96.02  E-value=0.0075  Score=43.52  Aligned_cols=30  Identities=30%  Similarity=0.383  Sum_probs=25.6

Q ss_pred             ceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         59 RKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      ..+|+|+||.||+.+.++ ++.||||++.+.
T Consensus         8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Es   38 (396)
T KOG0593|consen    8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVES   38 (396)
T ss_pred             hccccCcceEEEEeccCCcccEEEEEeeccC
Confidence            478999999999999765 789999998654

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=96.01  E-value=0.0051  Score=41.04  Aligned_cols=39  Identities=31%  Similarity=0.666  Sum_probs=30.4

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      |-++..++.+.+.||+|+||.||++...+ ..+++|.++.
T Consensus         1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~iK~~~~   39 (254)
T cd05083           1 WLLNLQKLTLGEIIGEGEFGAVLQGEYTG-QKVAVKNIKC   39 (254)
T ss_pred             CcccHHHceeeeeeccCCCCceEecccCC-CceEEEeecC
Confidence            33445567788899999999999998654 5789998764

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=96.00  E-value=0.015  Score=39.70  Aligned_cols=33  Identities=33%  Similarity=0.414  Sum_probs=26.8

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +...+.||+|+||.||++... .+..||+|.+..
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   35 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEK   35 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEeh
Confidence            445678999999999999864 467899998854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=95.99  E-value=0.016  Score=38.59  Aligned_cols=34  Identities=29%  Similarity=0.591  Sum_probs=28.5

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||+|... ++..+++|.++.
T Consensus         3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~   37 (267)
T cd08224           3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQI   37 (267)
T ss_pred             ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeec
Confidence            5667789999999999999986 567899998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG1163|consensus

Probab=95.96  E-value=0.01  Score=41.77  Aligned_cols=36  Identities=39%  Similarity=0.635  Sum_probs=28.9

Q ss_pred             cCCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      ...+.+...||+|+||.+|.|.. .++..||||.=..
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~   50 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESS   50 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecc
Confidence            34566778999999999999985 5678999997543

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=95.96  E-value=0.0082  Score=42.06  Aligned_cols=40  Identities=28%  Similarity=0.475  Sum_probs=31.8

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .|++. ..+.+.+.||+|+||.||++... .+..||+|.+..
T Consensus        10 ~~~~~-~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   50 (343)
T cd07878          10 VWEVP-ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSR   50 (343)
T ss_pred             Hhhhh-hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCc
Confidence            46665 45777789999999999999863 467899999864

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=95.96  E-value=0.018  Score=40.00  Aligned_cols=33  Identities=27%  Similarity=0.416  Sum_probs=27.1

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||+|... .+..||+|.++.
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   35 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIND   35 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEech
Confidence            456778999999999999864 467899998863

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=95.95  E-value=0.0098  Score=39.97  Aligned_cols=35  Identities=43%  Similarity=0.581  Sum_probs=27.8

Q ss_pred             CCceeeceEeeecccEEEEEEeCC----CCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~   87 (93)
                      .++.+.+.||+|+||.||+|.+..    ...|++|.++.
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~   42 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKS   42 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCC
Confidence            456678899999999999999743    23589999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=95.94  E-value=0.0034  Score=42.53  Aligned_cols=38  Identities=39%  Similarity=0.664  Sum_probs=29.1

Q ss_pred             ecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecCC
Q psy12538         51 DRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMG   88 (93)
Q Consensus        51 ~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~~   88 (93)
                      +...+.+.+.||+|+||.||+|...+      ...||+|.++..
T Consensus         3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~   46 (283)
T cd05091           3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDK   46 (283)
T ss_pred             CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCC
Confidence            34456677889999999999998632      357899998643

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=95.94  E-value=0.018  Score=38.65  Aligned_cols=40  Identities=23%  Similarity=0.233  Sum_probs=29.9

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +.+..++.....||+|+||.||+|... ++..|++|.+...
T Consensus         4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~   44 (268)
T cd06624           4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER   44 (268)
T ss_pred             ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCC
Confidence            444455555668999999999999864 4567899987643

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=95.94  E-value=0.013  Score=40.86  Aligned_cols=28  Identities=39%  Similarity=0.549  Sum_probs=23.8

Q ss_pred             eEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         60 KLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .||+|+||.||+|.... +..||+|.++.
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~   30 (316)
T cd05619           2 MLGKGSFGKVFLAELKGTNQFFAIKALKK   30 (316)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence            68999999999999754 56899998864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=95.91  E-value=0.014  Score=39.57  Aligned_cols=35  Identities=37%  Similarity=0.615  Sum_probs=28.0

Q ss_pred             CCceeeceEeeecccEEEEEEeC-----CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-----NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-----~~~~vavK~l~~   87 (93)
                      .++.+.+.||+|+||.||++.+.     .+..+++|.++.
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~   43 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQH   43 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEecc
Confidence            35667789999999999999863     356899999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=95.91  E-value=0.016  Score=39.63  Aligned_cols=33  Identities=33%  Similarity=0.389  Sum_probs=26.6

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +...+.||+|+||.||++... .+..+|+|.+..
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~   35 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEK   35 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEeh
Confidence            345678999999999999875 367899998854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG4236|consensus

Probab=95.90  E-value=0.0059  Score=47.07  Aligned_cols=31  Identities=39%  Similarity=0.546  Sum_probs=26.5

Q ss_pred             eceEeeecccEEEEEEe-CCCCeEEEEEecCC
Q psy12538         58 VRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMG   88 (93)
Q Consensus        58 ~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~   88 (93)
                      ++.||+|.||.||-|.. +.++.||||.|+..
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKl  600 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKL  600 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecc
Confidence            47899999999999987 45889999999653

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=95.90  E-value=0.014  Score=40.79  Aligned_cols=37  Identities=19%  Similarity=0.248  Sum_probs=29.5

Q ss_pred             ecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         51 DRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        51 ~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ...++.+.+.||+|+||.||++... .+..+|+|.+..
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~   40 (331)
T cd06649           3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHL   40 (331)
T ss_pred             CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeec
Confidence            3456777789999999999999975 356788888754

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=95.88  E-value=0.014  Score=41.83  Aligned_cols=39  Identities=26%  Similarity=0.377  Sum_probs=31.4

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEec
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLK   86 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~   86 (93)
                      ..+....+.+.+.||+|+||.||++.... +..+|+|.++
T Consensus        38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~   77 (370)
T cd05621          38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLS   77 (370)
T ss_pred             cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEE
Confidence            34455677788899999999999999754 6788999875

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=95.87  E-value=0.016  Score=38.81  Aligned_cols=34  Identities=32%  Similarity=0.681  Sum_probs=27.7

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||+|... ++..+++|.++.
T Consensus         3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~   37 (267)
T cd08228           3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQI   37 (267)
T ss_pred             ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeec
Confidence            4666788999999999999974 467899997753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=95.87  E-value=0.012  Score=41.34  Aligned_cols=38  Identities=18%  Similarity=0.323  Sum_probs=30.0

Q ss_pred             EecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +...++.+.+.||+|+||.||++... .+..+++|.++.
T Consensus         2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~   40 (333)
T cd06650           2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHL   40 (333)
T ss_pred             cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeec
Confidence            34566777889999999999999975 356788888754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0600|consensus

Probab=95.87  E-value=0.0037  Score=47.30  Aligned_cols=36  Identities=25%  Similarity=0.529  Sum_probs=28.1

Q ss_pred             CceeeceEeeecccEEEEEEe-CCCCeEEEEEecCCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMGS   89 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~~   89 (93)
                      .|...+.||+|.||+||+++- ..+..||+|++.-+.
T Consensus       118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~  154 (560)
T KOG0600|consen  118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDN  154 (560)
T ss_pred             HHHHHHHhcCcchhheeEeeecccCcEEEEEEeeccc
Confidence            333446899999999999984 557789999986543

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=95.85  E-value=0.0053  Score=41.37  Aligned_cols=37  Identities=41%  Similarity=0.639  Sum_probs=29.0

Q ss_pred             cCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~~   88 (93)
                      ..++.+.+.||+|+||.||+|....      ...+++|.++..
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~   46 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKET   46 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeeccc
Confidence            4456777899999999999998632      367899998653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=95.84  E-value=0.021  Score=39.80  Aligned_cols=33  Identities=24%  Similarity=0.457  Sum_probs=26.3

Q ss_pred             ceeeceEeeecccEEEEEEe----CCCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~----~~~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||++..    ..+..+|+|.++.
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~   38 (332)
T cd05614           2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQK   38 (332)
T ss_pred             ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEH
Confidence            45678899999999999875    2367899998853

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG4721|consensus

Probab=95.83  E-value=0.0014  Score=50.75  Aligned_cols=42  Identities=33%  Similarity=0.548  Sum_probs=36.6

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      .+.|+|+.+.|.-.+-||+|+-|.||.|++.+ ..||||+++.
T Consensus       116 ~e~WeiPFe~IsELeWlGSGaQGAVF~Grl~n-etVAVKKV~e  157 (904)
T KOG4721|consen  116 EELWEIPFEEISELEWLGSGAQGAVFLGRLHN-ETVAVKKVRE  157 (904)
T ss_pred             hhhccCCHHHhhhhhhhccCcccceeeeeccC-ceehhHHHhh
Confidence            35799999999888889999999999999987 5889998753

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=95.78  E-value=0.011  Score=39.73  Aligned_cols=37  Identities=46%  Similarity=0.740  Sum_probs=28.1

Q ss_pred             cCCceeeceEeeecccEEEEEEeCC----CCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~~   88 (93)
                      ..++.+.+.||+|.||.||+|.+..    ...+++|.++..
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~   43 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAG   43 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCC
Confidence            3456677899999999999998631    236889988653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=95.78  E-value=0.029  Score=37.60  Aligned_cols=34  Identities=24%  Similarity=0.445  Sum_probs=27.8

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-CCeEEEEEec
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLK   86 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~   86 (93)
                      .++.+.+.||+|.||.||.+.... +..|++|.+.
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~   36 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQ   36 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEee
Confidence            356677899999999999998743 6789999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=95.77  E-value=0.013  Score=38.85  Aligned_cols=29  Identities=52%  Similarity=0.845  Sum_probs=24.9

Q ss_pred             eEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         60 KLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      .||+|+||.||+|...++..+++|.+...
T Consensus         2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~   30 (250)
T cd05085           2 LLGKGNFGEVFKGTLKDKTPVAVKTCKED   30 (250)
T ss_pred             ccCCCCCceEEEEEecCCcEEEEEecCCc
Confidence            68999999999999877778999987643

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=95.76  E-value=0.014  Score=39.08  Aligned_cols=32  Identities=44%  Similarity=0.729  Sum_probs=25.1

Q ss_pred             eeeceEeeecccEEEEEEeCCC---CeEEEEEecC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWNNT---TPVAIKTLKM   87 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~~~---~~vavK~l~~   87 (93)
                      .+.+.||+|+||.||+|.+...   ..+|+|.++.
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~   36 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKI   36 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEeccc
Confidence            3567899999999999997542   2588998764

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=95.75  E-value=0.022  Score=40.22  Aligned_cols=35  Identities=26%  Similarity=0.305  Sum_probs=28.4

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++... .+..+|+|.+..
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   56 (359)
T cd07876          21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR   56 (359)
T ss_pred             hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecc
Confidence            35666789999999999999864 467899999854

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=95.72  E-value=0.015  Score=40.50  Aligned_cols=28  Identities=39%  Similarity=0.487  Sum_probs=23.8

Q ss_pred             eEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         60 KLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .||+|+||.||+|.... +..+|+|.++.
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~   30 (321)
T cd05591           2 VLGKGSFGKVMLAELKGTDEVYAIKVLKK   30 (321)
T ss_pred             ccccCCCeEEEEEEECCCCCEEEEEEEeH
Confidence            58999999999999754 57899999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=95.71  E-value=0.018  Score=40.08  Aligned_cols=29  Identities=34%  Similarity=0.487  Sum_probs=24.2

Q ss_pred             ceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      +.||+|+||.||++.... +..+|+|.++.
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~   30 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKK   30 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            368999999999999754 56899999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=95.68  E-value=0.011  Score=40.24  Aligned_cols=39  Identities=38%  Similarity=0.608  Sum_probs=30.2

Q ss_pred             EecCCceeeceEeeecccEEEEEEeC------CCCeEEEEEecCC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWN------NTTPVAIKTLKMG   88 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~------~~~~vavK~l~~~   88 (93)
                      ++..++.+...||+|+||.||++..+      ....+++|.+...
T Consensus         2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~   46 (288)
T cd05050           2 YPRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE   46 (288)
T ss_pred             CChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCC
Confidence            34566777889999999999999863      2468899988643

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=95.66  E-value=0.017  Score=38.70  Aligned_cols=35  Identities=23%  Similarity=0.595  Sum_probs=28.1

Q ss_pred             CCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      .++.+.+.||+|+||.||+|.. .++..+++|.+..
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~   44 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKL   44 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEec
Confidence            3456677899999999999997 3467889998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG1165|consensus

Probab=95.64  E-value=0.03  Score=40.99  Aligned_cols=37  Identities=32%  Similarity=0.478  Sum_probs=29.8

Q ss_pred             eEecCCceeeceEeeecccEEEEEE-eCCCCeEEEEEe
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGL-WNNTTPVAIKTL   85 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~-~~~~~~vavK~l   85 (93)
                      .+-.-++.+.++||+|+||..+.|. +-++..||||.=
T Consensus        24 ~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfE   61 (449)
T KOG1165|consen   24 LMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFE   61 (449)
T ss_pred             eEecccceeccccccCcceeeecccccccCceEEEEec
Confidence            3445678889999999999999997 334579999974

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=95.63  E-value=0.028  Score=39.81  Aligned_cols=35  Identities=29%  Similarity=0.296  Sum_probs=28.4

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++... .+..+|+|.+..
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   59 (364)
T cd07875          24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR   59 (364)
T ss_pred             cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCc
Confidence            45667789999999999999864 356899999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=95.63  E-value=0.024  Score=38.50  Aligned_cols=34  Identities=24%  Similarity=0.485  Sum_probs=27.5

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|.||.||++... ++..|++|.++.
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~   36 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRL   36 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehh
Confidence            3556678999999999999975 467899998754

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=95.60  E-value=0.022  Score=39.71  Aligned_cols=29  Identities=28%  Similarity=0.455  Sum_probs=24.3

Q ss_pred             ceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.||+|+||.||++... ++..+|+|.+..
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   30 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQK   30 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            36899999999999974 467899999853

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=95.59  E-value=0.031  Score=38.47  Aligned_cols=35  Identities=23%  Similarity=0.476  Sum_probs=28.5

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .++.+.+.||+|.||.||+|... .+..||+|.++.
T Consensus         7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~   42 (309)
T cd07845           7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRM   42 (309)
T ss_pred             cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEe
Confidence            35666778999999999999974 467899999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG1166|consensus

Probab=95.58  E-value=0.025  Score=45.90  Aligned_cols=44  Identities=23%  Similarity=0.436  Sum_probs=37.9

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ..+.++....+.+.+.||+|+||+||+|...++..||+|.-++.
T Consensus       690 ~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~  733 (974)
T KOG1166|consen  690 NTEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPP  733 (974)
T ss_pred             cceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCC
Confidence            45678888889999999999999999999877889999987654

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=95.57  E-value=0.022  Score=39.77  Aligned_cols=28  Identities=36%  Similarity=0.469  Sum_probs=23.7

Q ss_pred             eEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         60 KLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .||+|+||.||++..+ ++..||+|.++.
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~   30 (320)
T cd05590           2 VLGKGSFGKVMLARLKESGRLYAVKVLKK   30 (320)
T ss_pred             eeeeCCCeEEEEEEEcCCCCEEEEEEEEH
Confidence            6899999999999975 367899998863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=95.56  E-value=0.023  Score=39.79  Aligned_cols=28  Identities=21%  Similarity=0.289  Sum_probs=23.9

Q ss_pred             eEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         60 KLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .||+|+||.||++... .+..+|+|.++.
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~   30 (329)
T cd05588           2 VIGRGSYAKVLLVELKKTRRIYAMKVIKK   30 (329)
T ss_pred             eEeeCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            6899999999999875 467899999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=95.56  E-value=0.023  Score=39.66  Aligned_cols=29  Identities=34%  Similarity=0.359  Sum_probs=24.0

Q ss_pred             ceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.||+|+||.||++... ++..+|+|.++.
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~   30 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKK   30 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            36899999999999864 467899998864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=95.54  E-value=0.032  Score=38.28  Aligned_cols=34  Identities=26%  Similarity=0.520  Sum_probs=27.7

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||++... .+..||+|.++.
T Consensus         7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~   41 (301)
T cd07873           7 TYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRL   41 (301)
T ss_pred             ceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEec
Confidence            4566778999999999999875 356899998864

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=95.54  E-value=0.015  Score=38.92  Aligned_cols=38  Identities=39%  Similarity=0.677  Sum_probs=28.9

Q ss_pred             ecCCceeeceEeeecccEEEEEEeCC----CCeEEEEEecCC
Q psy12538         51 DRNSLKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKMG   88 (93)
Q Consensus        51 ~~~~~~~~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~~   88 (93)
                      ...++...+.||+|+||.||+|....    ...+++|.++..
T Consensus         3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~   44 (268)
T cd05063           3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPG   44 (268)
T ss_pred             ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEecccc
Confidence            34566777899999999999998742    236889988643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=95.54  E-value=0.022  Score=39.60  Aligned_cols=28  Identities=36%  Similarity=0.474  Sum_probs=23.8

Q ss_pred             eEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         60 KLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .||+|+||.||++.... +..+|+|.++.
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~   30 (318)
T cd05570           2 VLGKGSFGKVLLAELKGTDELYAVKVLKK   30 (318)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            68999999999998754 56899998864

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=95.52  E-value=0.035  Score=37.79  Aligned_cols=34  Identities=32%  Similarity=0.484  Sum_probs=27.7

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +.+.+.||+|.||.||+|... .+..+++|.++..
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~   36 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLG   36 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEecc
Confidence            445678999999999999975 4678999998654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=95.51  E-value=0.024  Score=39.13  Aligned_cols=30  Identities=23%  Similarity=0.446  Sum_probs=24.3

Q ss_pred             eceEeeecccEEEEEEeC---CCCeEEEEEecC
Q psy12538         58 VRKLGSGQFGEVWEGLWN---NTTPVAIKTLKM   87 (93)
Q Consensus        58 ~~~iG~G~fG~V~~g~~~---~~~~vavK~l~~   87 (93)
                      ...||+|+||.||+|...   ....+|+|.++.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~   38 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEG   38 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECC
Confidence            357999999999999864   346889998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=95.49  E-value=0.018  Score=39.22  Aligned_cols=35  Identities=20%  Similarity=0.567  Sum_probs=28.9

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .++.+.+.||+|.||.||+|..+. +..|++|.++.
T Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~   42 (302)
T cd07864           7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRL   42 (302)
T ss_pred             hhhheeeeecccCCEEEEEEEECCCCcEEEEEEEee
Confidence            456677899999999999999853 67899999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=95.48  E-value=0.017  Score=39.92  Aligned_cols=42  Identities=43%  Similarity=0.650  Sum_probs=33.4

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC------CCCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN------NTTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~------~~~~vavK~l~~   87 (93)
                      ..|.+...++.+.+.||+|+||.||++...      ....+|+|.++.
T Consensus        28 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~   75 (302)
T cd05055          28 LKWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKP   75 (302)
T ss_pred             ccccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCc
Confidence            357788888999999999999999999752      134688998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=95.48  E-value=0.031  Score=39.28  Aligned_cols=40  Identities=30%  Similarity=0.555  Sum_probs=32.0

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .|++.. .+...+.||+|+||.||+|... .+..+|+|.++.
T Consensus        10 ~~~~~~-~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~   50 (342)
T cd07879          10 VWELPE-RYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSR   50 (342)
T ss_pred             hhcccc-ceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecC
Confidence            477753 5777789999999999999964 467899998854

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=95.47  E-value=0.042  Score=37.29  Aligned_cols=35  Identities=29%  Similarity=0.551  Sum_probs=28.4

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.+.+.||+|+||.||+|..+ ++..+++|.+..
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~   40 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRL   40 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEec
Confidence            34566789999999999999875 467899999854

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=95.46  E-value=0.011  Score=39.91  Aligned_cols=37  Identities=43%  Similarity=0.747  Sum_probs=28.9

Q ss_pred             ecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecC
Q psy12538         51 DRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKM   87 (93)
Q Consensus        51 ~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~   87 (93)
                      +.+++.+.+.||+|+||.||+|....      ...+++|.++.
T Consensus         3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~   45 (283)
T cd05048           3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKE   45 (283)
T ss_pred             ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEeccc
Confidence            34567788899999999999998643      24688998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=95.46  E-value=0.037  Score=36.78  Aligned_cols=34  Identities=24%  Similarity=0.452  Sum_probs=27.5

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||.|+||.||+|.+. ++..+++|.+..
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~   36 (267)
T cd06610           2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDL   36 (267)
T ss_pred             cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEecc
Confidence            4566778999999999999974 456889998854

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=95.43  E-value=0.03  Score=43.48  Aligned_cols=35  Identities=29%  Similarity=0.504  Sum_probs=29.0

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||+|... .+..||+|.++.
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~   39 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKK   39 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEeh
Confidence            35667789999999999999975 467899999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=95.43  E-value=0.038  Score=37.28  Aligned_cols=33  Identities=27%  Similarity=0.571  Sum_probs=27.0

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.+.||+|.||.||+|... .+..+++|.++.
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~   35 (285)
T cd07861           2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRL   35 (285)
T ss_pred             ceEeeEecccCceEEEEEEECCCCcEEEEEEecc
Confidence            445678999999999999974 467899998854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=95.42  E-value=0.023  Score=37.98  Aligned_cols=32  Identities=44%  Similarity=0.717  Sum_probs=25.6

Q ss_pred             eeeceEeeecccEEEEEEeCC----CCeEEEEEecC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKM   87 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~   87 (93)
                      .+.+.||+|+||.||+|....    ...+|+|.++.
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~   37 (273)
T cd05035           2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKL   37 (273)
T ss_pred             ccccccCcCCCceEEEEEEecCCCCcceEEEEEecc
Confidence            456789999999999998742    35799998864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=95.42  E-value=0.031  Score=36.96  Aligned_cols=31  Identities=39%  Similarity=0.548  Sum_probs=25.8

Q ss_pred             eeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         57 FVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        57 ~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.||+|+||.||+|... ++..+++|.+..
T Consensus         4 ~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~   35 (258)
T cd06632           4 KGELLGSGSFGSVYEGLNLDDGDFFAVKEVSL   35 (258)
T ss_pred             ccceeeecCCceEEEEEEcCCCcEEEEEEEEE
Confidence            4568999999999999975 567899998754

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=95.41  E-value=0.021  Score=38.31  Aligned_cols=34  Identities=26%  Similarity=0.552  Sum_probs=27.1

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|.||.||+|... .+..+++|.++.
T Consensus         7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~   41 (272)
T cd06637           7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV   41 (272)
T ss_pred             hhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEc
Confidence            4555678999999999999975 367889998754

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=95.40  E-value=0.034  Score=37.20  Aligned_cols=34  Identities=29%  Similarity=0.376  Sum_probs=28.0

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++... ++..+++|.+..
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~   36 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDK   36 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEech
Confidence            4567788999999999999975 467899998754

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=95.40  E-value=0.03  Score=38.00  Aligned_cols=34  Identities=21%  Similarity=0.433  Sum_probs=27.4

Q ss_pred             CceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++.. ..+..+++|.+..
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~   36 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPL   36 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEec
Confidence            455677899999999999986 3467899998854

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=95.39  E-value=0.012  Score=40.28  Aligned_cols=37  Identities=41%  Similarity=0.548  Sum_probs=27.5

Q ss_pred             ecCCceeeceEeeecccEEEEEEeCC---------------CCeEEEEEecC
Q psy12538         51 DRNSLKFVRKLGSGQFGEVWEGLWNN---------------TTPVAIKTLKM   87 (93)
Q Consensus        51 ~~~~~~~~~~iG~G~fG~V~~g~~~~---------------~~~vavK~l~~   87 (93)
                      +...+.+.+.||+|+||.||++...+               ...||+|.++.
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~   54 (295)
T cd05097           3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRA   54 (295)
T ss_pred             chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCC
Confidence            44566777899999999999987532               22588998864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=95.38  E-value=0.038  Score=38.96  Aligned_cols=35  Identities=29%  Similarity=0.297  Sum_probs=28.1

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++... .+..+|+|.+..
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   52 (355)
T cd07874          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR   52 (355)
T ss_pred             hceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCC
Confidence            35666788999999999999853 367899998864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=95.38  E-value=0.033  Score=37.60  Aligned_cols=34  Identities=24%  Similarity=0.289  Sum_probs=27.5

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|.||.||++.++ .+..+++|.+..
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~   36 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLE   36 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhh
Confidence            3556788999999999999985 367899998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>KOG0594|consensus

Probab=95.38  E-value=0.017  Score=41.50  Aligned_cols=37  Identities=27%  Similarity=0.422  Sum_probs=28.9

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCCCc
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMGSI   90 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~~~   90 (93)
                      .+...+.||+|.||.||+|+.+ .+..||+|.+.....
T Consensus        12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~   49 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFE   49 (323)
T ss_pred             HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEecccc
Confidence            4444567999999999999964 467999999976543

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=95.37  E-value=0.039  Score=38.59  Aligned_cols=34  Identities=24%  Similarity=0.370  Sum_probs=28.0

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||+|... .+..||+|.++.
T Consensus         6 ~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~   40 (336)
T cd07849           6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISP   40 (336)
T ss_pred             ceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecc
Confidence            5667789999999999999864 467899998853

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=95.36  E-value=0.03  Score=39.30  Aligned_cols=28  Identities=21%  Similarity=0.289  Sum_probs=23.7

Q ss_pred             eEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         60 KLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .||+|+||.||++.... +..+|+|.++.
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~   30 (329)
T cd05618           2 VIGRGSYAKVLLVRLKKTERIYAMKVVKK   30 (329)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEh
Confidence            68999999999999753 57899999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=95.35  E-value=0.049  Score=37.03  Aligned_cols=34  Identities=35%  Similarity=0.589  Sum_probs=27.6

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|.||.||+|... .+..+++|.+..
T Consensus         6 ~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~   40 (291)
T cd07870           6 SYLNLEKLGEGSYATVYKGISRINGQLVALKVISM   40 (291)
T ss_pred             eeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecc
Confidence            4556778999999999999864 466899998854

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=95.34  E-value=0.012  Score=40.01  Aligned_cols=34  Identities=32%  Similarity=0.488  Sum_probs=27.4

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.....||+|+||.||++... .+..+|+|.+..
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~   39 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRS   39 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehh
Confidence            4556678999999999999874 367899998864

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=95.32  E-value=0.042  Score=37.45  Aligned_cols=35  Identities=34%  Similarity=0.547  Sum_probs=28.5

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .++.+.+.||+|+||.||++... ++..+++|.+..
T Consensus         8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~   43 (311)
T cd07866           8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILM   43 (311)
T ss_pred             ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEe
Confidence            45667788999999999999975 367889998754

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=95.32  E-value=0.03  Score=37.86  Aligned_cols=39  Identities=23%  Similarity=0.451  Sum_probs=29.7

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .....++.+.+.||+|+||.||++... .+..+++|.++.
T Consensus        14 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~   53 (286)
T cd06638          14 PDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDP   53 (286)
T ss_pred             CCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecc
Confidence            334456667788999999999999874 356889998754

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG0663|consensus

Probab=95.31  E-value=0.0087  Score=43.60  Aligned_cols=34  Identities=26%  Similarity=0.445  Sum_probs=27.5

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +...+.|++|.||.||+|+.+ ....||.|.++.+
T Consensus        78 fe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kme  112 (419)
T KOG0663|consen   78 FEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKME  112 (419)
T ss_pred             HHHHhhcccCcceeEEEeccCCcceeEEeeecccc
Confidence            344578999999999999964 4679999999764

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=95.28  E-value=0.028  Score=37.09  Aligned_cols=34  Identities=44%  Similarity=0.726  Sum_probs=27.1

Q ss_pred             eeeceEeeecccEEEEEEeCC-----CCeEEEEEecCCC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWNN-----TTPVAIKTLKMGS   89 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~~-----~~~vavK~l~~~~   89 (93)
                      .+.+.||+|+||.||++.+..     ...+++|.++...
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~   40 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA   40 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC
Confidence            356789999999999999754     3679999986543

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=95.27  E-value=0.032  Score=37.61  Aligned_cols=32  Identities=38%  Similarity=0.598  Sum_probs=26.3

Q ss_pred             eeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .+.+.||+|+||.||+|.... +..+++|.+..
T Consensus         2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~   34 (283)
T cd07830           2 KVIKQLGDGTFGSVYLARNKETGELVAIKKMKK   34 (283)
T ss_pred             eeheeeccCCceEEEEEEECCCCcEEEEEEehh
Confidence            456789999999999999854 56889998754

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0598|consensus

Probab=95.26  E-value=0.013  Score=42.55  Aligned_cols=38  Identities=24%  Similarity=0.483  Sum_probs=30.5

Q ss_pred             EecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      +..++|.+.+.||+|+||.||..+-++ +..+|.|.++.
T Consensus        22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K   60 (357)
T KOG0598|consen   22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKK   60 (357)
T ss_pred             CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhh
Confidence            334677888999999999999988654 67889998864

>KOG0591|consensus

Probab=95.25  E-value=0.0026  Score=45.47  Aligned_cols=37  Identities=27%  Similarity=0.522  Sum_probs=29.5

Q ss_pred             ecCCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         51 DRNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        51 ~~~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      ..+++.+.++||.|+||+||++.. .++..+|.|.++=
T Consensus        17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f   54 (375)
T KOG0591|consen   17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQF   54 (375)
T ss_pred             cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcch
Confidence            345677889999999999999984 5567888887753

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=95.24  E-value=0.048  Score=38.40  Aligned_cols=40  Identities=33%  Similarity=0.567  Sum_probs=31.4

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .|++. ..+.+.+.||+|+||.||++... .+..||+|.++.
T Consensus        10 ~~~~~-~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   50 (343)
T cd07880          10 IWEVP-DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYR   50 (343)
T ss_pred             hhccc-cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecc
Confidence            46664 35777889999999999999863 467899998854

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=95.24  E-value=0.021  Score=38.65  Aligned_cols=34  Identities=24%  Similarity=0.620  Sum_probs=27.8

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++... .+..+++|.++.
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~   36 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRL   36 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeec
Confidence            3556778999999999999985 467899998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=95.24  E-value=0.033  Score=38.70  Aligned_cols=29  Identities=28%  Similarity=0.462  Sum_probs=24.0

Q ss_pred             ceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.||+|+||.||++... ++..+|+|.+..
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~   30 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQK   30 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence            36899999999999974 467899998853

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=95.23  E-value=0.034  Score=38.86  Aligned_cols=29  Identities=31%  Similarity=0.350  Sum_probs=23.9

Q ss_pred             ceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.||+|+||.||++... ++..||+|.++.
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~   30 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRK   30 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence            36899999999999864 467899999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=95.22  E-value=0.019  Score=38.87  Aligned_cols=36  Identities=50%  Similarity=0.879  Sum_probs=28.4

Q ss_pred             cCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~   87 (93)
                      ..++.+.+.||+|+||.||+|.+..      ...|++|.+..
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~   46 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPE   46 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCC
Confidence            4567778899999999999998753      45788888753

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=95.21  E-value=0.033  Score=38.81  Aligned_cols=29  Identities=28%  Similarity=0.450  Sum_probs=23.8

Q ss_pred             ceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.||+|+||.||++... ++..+|+|.+..
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~   30 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQK   30 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            36899999999999975 356899998853

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=95.18  E-value=0.023  Score=43.38  Aligned_cols=30  Identities=20%  Similarity=0.273  Sum_probs=27.0

Q ss_pred             ceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         59 RKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      +.||+|++|+||+|++++ ++.||||+++++
T Consensus       125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~  155 (537)
T PRK04750        125 KPLASASIAQVHFARLKDNGREVVVKVLRPD  155 (537)
T ss_pred             hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence            579999999999999977 889999999765

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=95.15  E-value=0.039  Score=37.91  Aligned_cols=30  Identities=23%  Similarity=0.450  Sum_probs=24.2

Q ss_pred             eceEeeecccEEEEEEeCC---CCeEEEEEecC
Q psy12538         58 VRKLGSGQFGEVWEGLWNN---TTPVAIKTLKM   87 (93)
Q Consensus        58 ~~~iG~G~fG~V~~g~~~~---~~~vavK~l~~   87 (93)
                      ...||+|+||.||++...+   ...+|+|.++.
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~   38 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEG   38 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecC
Confidence            3579999999999998643   45789998864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PHA03209 serine/threonine kinase US3; Provisional

Probab=95.13  E-value=0.044  Score=38.88  Aligned_cols=34  Identities=21%  Similarity=0.303  Sum_probs=27.3

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-CCeEEEEEec
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLK   86 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~   86 (93)
                      ..+.+.+.||+|+||.||+|.... +..||+|...
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~  100 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQ  100 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCC
Confidence            356777899999999999999754 5678888754

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=95.11  E-value=0.048  Score=36.53  Aligned_cols=34  Identities=26%  Similarity=0.409  Sum_probs=27.6

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      .++.+.+.||+|+||.||++... .+..+++|.+.
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~   36 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVP   36 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEe
Confidence            45667889999999999999864 36789999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=95.11  E-value=0.028  Score=38.00  Aligned_cols=37  Identities=43%  Similarity=0.823  Sum_probs=27.9

Q ss_pred             cCCceeeceEeeecccEEEEEEeCC-----CCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNN-----TTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~-----~~~vavK~l~~~   88 (93)
                      ...+.+.+.||+|+||.||+|.++.     ...+++|.++..
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~   47 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREE   47 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCC
Confidence            3456677899999999999999743     225788887643

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=95.10  E-value=0.036  Score=38.62  Aligned_cols=29  Identities=28%  Similarity=0.454  Sum_probs=23.9

Q ss_pred             ceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.||+|+||.||++... ++..+|+|.+..
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~   30 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQK   30 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            36899999999999864 467899998853

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=95.09  E-value=0.039  Score=38.58  Aligned_cols=28  Identities=25%  Similarity=0.328  Sum_probs=23.8

Q ss_pred             eEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         60 KLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .||+|+||.||++... ++..+|+|.++.
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~   30 (327)
T cd05617           2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKK   30 (327)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            6899999999999874 467899999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=95.08  E-value=0.04  Score=38.61  Aligned_cols=29  Identities=34%  Similarity=0.363  Sum_probs=24.0

Q ss_pred             ceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.||+|+||.||++... .+..+|+|.++.
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~   30 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKK   30 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence            36899999999999864 467899999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=95.07  E-value=0.038  Score=37.85  Aligned_cols=35  Identities=34%  Similarity=0.567  Sum_probs=27.1

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-C--CeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-T--TPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~--~~vavK~l~~   87 (93)
                      +++.+.+.||+|+||.||+|.... +  ..+++|.++.
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~   39 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKE   39 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccc
Confidence            467788899999999999998754 2  3467887763

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG0696|consensus

Probab=95.05  E-value=0.035  Score=41.87  Aligned_cols=40  Identities=33%  Similarity=0.454  Sum_probs=32.1

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      .+.-.++.+...||.|+||.|..+.-++ ...+|||+|+.+
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKD  385 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKD  385 (683)
T ss_pred             ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccc
Confidence            4555688899999999999999987654 457899998754

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=95.05  E-value=0.058  Score=38.01  Aligned_cols=40  Identities=28%  Similarity=0.498  Sum_probs=31.6

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      .|++. ..+.+.+.||+|+||.||++.. .++..||+|.++.
T Consensus        12 ~~~~~-~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~   52 (345)
T cd07877          12 IWEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR   52 (345)
T ss_pred             Hhhcc-CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecC
Confidence            35554 4577788999999999999985 4567899998864

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=95.02  E-value=0.058  Score=36.34  Aligned_cols=34  Identities=29%  Similarity=0.544  Sum_probs=27.6

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +.+.+.||+|.||.||+|... ++..+++|.++..
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~   36 (284)
T cd07836           2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLD   36 (284)
T ss_pred             ceEeeeeccCCceEEEEEEECCCCeEEEEEEeccc
Confidence            456778999999999999975 4678999988643

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=95.01  E-value=0.029  Score=37.60  Aligned_cols=32  Identities=41%  Similarity=0.578  Sum_probs=25.5

Q ss_pred             eeeceEeeecccEEEEEEeCC----CCeEEEEEecC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKM   87 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~   87 (93)
                      .+.+.||+|+||.||+|.+..    +..+|+|.++.
T Consensus         2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~   37 (273)
T cd05074           2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKA   37 (273)
T ss_pred             cchhcccCCCCCCEEeeEeeccCCCceEEEEEEecc
Confidence            356689999999999998632    46899998864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=95.01  E-value=0.022  Score=38.96  Aligned_cols=37  Identities=43%  Similarity=0.556  Sum_probs=27.6

Q ss_pred             ecCCceeeceEeeecccEEEEEEeCC-----------------CCeEEEEEecC
Q psy12538         51 DRNSLKFVRKLGSGQFGEVWEGLWNN-----------------TTPVAIKTLKM   87 (93)
Q Consensus        51 ~~~~~~~~~~iG~G~fG~V~~g~~~~-----------------~~~vavK~l~~   87 (93)
                      ++..+.+.+.||+|+||.||++.+..                 ...+|+|.+..
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~   56 (296)
T cd05095           3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRE   56 (296)
T ss_pred             ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccc
Confidence            34567778899999999999986421                 23678888864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=95.00  E-value=0.033  Score=37.44  Aligned_cols=36  Identities=36%  Similarity=0.636  Sum_probs=28.2

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-----CCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-----TTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-----~~~vavK~l~~~   88 (93)
                      .++.+.+.||+|+||.||++.+..     +..+|+|.++..
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~   44 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHS   44 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccc
Confidence            345666889999999999998742     468999998654

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=95.00  E-value=0.044  Score=38.20  Aligned_cols=29  Identities=34%  Similarity=0.357  Sum_probs=23.8

Q ss_pred             ceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.||+|+||.||++... .+..+|+|.++.
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~   30 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKK   30 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence            36899999999999864 467899999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=95.00  E-value=0.045  Score=38.33  Aligned_cols=34  Identities=24%  Similarity=0.357  Sum_probs=27.6

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||++... .+..|++|.++.
T Consensus         6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~   40 (337)
T cd07858           6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIAN   40 (337)
T ss_pred             ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecc
Confidence            4566778999999999999863 467899998754

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG0575|consensus

Probab=94.98  E-value=0.037  Score=42.57  Aligned_cols=34  Identities=29%  Similarity=0.340  Sum_probs=29.3

Q ss_pred             CceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      .+...+.||+|+|..+|+++. ..+..+|+|++..
T Consensus        19 ~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk   53 (592)
T KOG0575|consen   19 RYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPK   53 (592)
T ss_pred             eeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeeh
Confidence            456678999999999999997 6678999999865

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=94.95  E-value=0.059  Score=36.30  Aligned_cols=33  Identities=27%  Similarity=0.383  Sum_probs=27.0

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+...||+|.||.||++..+ ++..+++|.+..
T Consensus         3 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~   36 (286)
T cd07847           3 YEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVE   36 (286)
T ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEEee
Confidence            455678999999999999985 367899998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG1035|consensus

Probab=94.95  E-value=0.0067  Score=49.94  Aligned_cols=35  Identities=26%  Similarity=0.350  Sum_probs=28.0

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +|.....||+|+||.||+.+-+ +++.+|||+|...
T Consensus       480 DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~  515 (1351)
T KOG1035|consen  480 DFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLK  515 (1351)
T ss_pred             hhHHHHHhcCCCCceEEEEeecccchhhhhhhccCc
Confidence            4444568999999999999853 4689999999764

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=94.94  E-value=0.035  Score=38.30  Aligned_cols=36  Identities=33%  Similarity=0.533  Sum_probs=27.0

Q ss_pred             cCCceeeceEeeecccEEEEEEeCC-C--CeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNN-T--TPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~-~--~~vavK~l~~   87 (93)
                      .+++.+.+.||+|+||.||++.++. +  ..+++|.++.
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~   44 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE   44 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecc
Confidence            3567778899999999999999743 2  3457777653

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG0662|consensus

Probab=94.93  E-value=0.022  Score=38.64  Aligned_cols=31  Identities=26%  Similarity=0.562  Sum_probs=25.5

Q ss_pred             ceEeeecccEEEEEEe-CCCCeEEEEEecCCC
Q psy12538         59 RKLGSGQFGEVWEGLW-NNTTPVAIKTLKMGS   89 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~~   89 (93)
                      ++||+|.||.||+|+- .....||.|..+.+.
T Consensus         8 ekigegtygtvfkarn~~t~eivalkrvrldd   39 (292)
T KOG0662|consen    8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDD   39 (292)
T ss_pred             HhhcCCcceeeEecccCCccceEEEEEEeccC
Confidence            5799999999999985 457799999986543

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=94.92  E-value=0.066  Score=35.99  Aligned_cols=32  Identities=25%  Similarity=0.447  Sum_probs=26.6

Q ss_pred             eeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .+.+.||+|.||.||++..+. +..+++|.++.
T Consensus         2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~   34 (287)
T cd07838           2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRV   34 (287)
T ss_pred             eEEEEecccCceEEEEEEECCCCCEEEEEEecc
Confidence            345689999999999999864 67899999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>PHA03212 serine/threonine kinase US3; Provisional

Probab=94.92  E-value=0.044  Score=39.70  Aligned_cols=37  Identities=19%  Similarity=0.287  Sum_probs=29.7

Q ss_pred             EecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      +....+.+.+.||+|+||.||++... .+..||+|...
T Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~  126 (391)
T PHA03212         89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ  126 (391)
T ss_pred             cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh
Confidence            34456888889999999999999863 46788999764

>KOG0582|consensus

Probab=94.91  E-value=0.037  Score=41.60  Aligned_cols=43  Identities=16%  Similarity=0.313  Sum_probs=36.3

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEe-CCCCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~   88 (93)
                      ..|-+...++.+.+.||.|..+.||+|++ +....||||.+..+
T Consensus        19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLE   62 (516)
T KOG0582|consen   19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLE   62 (516)
T ss_pred             ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehh
Confidence            45777788898999999999999999997 45689999998653

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=94.91  E-value=0.019  Score=39.03  Aligned_cols=36  Identities=25%  Similarity=0.290  Sum_probs=28.6

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..++.+.+.||+|+||.||++... ++..+++|.+..
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~   40 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHI   40 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEe
Confidence            345667789999999999999874 467889988754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=94.88  E-value=0.065  Score=43.46  Aligned_cols=34  Identities=26%  Similarity=0.462  Sum_probs=28.0

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||+|... .+..||+|.+..
T Consensus         3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~   37 (932)
T PRK13184          3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIRE   37 (932)
T ss_pred             CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECc
Confidence            4556779999999999999874 367899999864

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=94.88  E-value=0.031  Score=37.32  Aligned_cols=29  Identities=45%  Similarity=0.779  Sum_probs=23.3

Q ss_pred             eEeeecccEEEEEEeC---CCCeEEEEEecCC
Q psy12538         60 KLGSGQFGEVWEGLWN---NTTPVAIKTLKMG   88 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~---~~~~vavK~l~~~   88 (93)
                      .||+|+||.||+|.++   ....+|+|.++..
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~   33 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKND   33 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCC
Confidence            5899999999999863   3568999988643

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=94.87  E-value=0.065  Score=36.07  Aligned_cols=34  Identities=24%  Similarity=0.430  Sum_probs=27.6

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +.+.+.||+|.||.||+|... ++..+++|.+...
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~   36 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALR   36 (286)
T ss_pred             ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcc
Confidence            456678999999999999974 4678999998643

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=94.86  E-value=0.055  Score=37.02  Aligned_cols=33  Identities=27%  Similarity=0.438  Sum_probs=27.2

Q ss_pred             ceeeceEeeecccEEEEEEeCC---CCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWNN---TTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~~---~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||+|....   +..+|+|.+..
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~   37 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKG   37 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEecc
Confidence            4456789999999999999743   57899999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=94.84  E-value=0.07  Score=36.33  Aligned_cols=35  Identities=31%  Similarity=0.545  Sum_probs=28.2

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++... .+..+|+|.+..
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~   47 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLM   47 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEec
Confidence            35666788999999999999974 367899998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=94.84  E-value=0.033  Score=37.31  Aligned_cols=33  Identities=30%  Similarity=0.507  Sum_probs=26.4

Q ss_pred             ceeeceEeeecccEEEEEEeCC--CCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWNN--TTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~~--~~~vavK~l~~   87 (93)
                      +.+.+.||+|.||.||++....  ...+++|.+..
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~   36 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINV   36 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeec
Confidence            4456789999999999999854  56889998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=94.83  E-value=0.045  Score=36.90  Aligned_cols=34  Identities=26%  Similarity=0.347  Sum_probs=27.6

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|.||.||++..+ ++..|++|.++.
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~   36 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKE   36 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhh
Confidence            3556778999999999999975 367899998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=94.81  E-value=0.036  Score=38.69  Aligned_cols=26  Identities=31%  Similarity=0.526  Sum_probs=22.2

Q ss_pred             EeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         61 LGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        61 iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      ||+|+||.||++... .+..+|+|.+.
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~   27 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLS   27 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEe
Confidence            699999999999874 36789999985

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=94.77  E-value=0.033  Score=37.83  Aligned_cols=35  Identities=46%  Similarity=0.808  Sum_probs=25.8

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-CC----eEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-TT----PVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~~----~vavK~l~~   87 (93)
                      .++.+.+.||+|+||.||+|.+.. +.    .+++|.+..
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~   46 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQD   46 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccc
Confidence            355667889999999999999742 22    467777743

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=94.76  E-value=0.073  Score=36.27  Aligned_cols=34  Identities=29%  Similarity=0.489  Sum_probs=27.9

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++... .+..+++|.+..
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~   36 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSK   36 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEH
Confidence            4567789999999999999875 467899998753

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=94.75  E-value=0.063  Score=35.51  Aligned_cols=33  Identities=21%  Similarity=0.575  Sum_probs=26.9

Q ss_pred             ceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||++.... +..+++|.+..
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~   35 (257)
T cd08225           2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDL   35 (257)
T ss_pred             ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeH
Confidence            4567789999999999999854 56789998854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=94.75  E-value=0.08  Score=35.72  Aligned_cols=33  Identities=24%  Similarity=0.514  Sum_probs=26.6

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.+.||+|.||.||++... .+..+++|.++.
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~   35 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRL   35 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeec
Confidence            345678999999999999975 467889998854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=94.74  E-value=0.074  Score=35.32  Aligned_cols=33  Identities=21%  Similarity=0.398  Sum_probs=26.5

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||++... .+..+++|.++.
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~   35 (255)
T cd08219           2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRL   35 (255)
T ss_pred             ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEc
Confidence            445678999999999999874 467889998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=94.73  E-value=0.059  Score=36.21  Aligned_cols=32  Identities=34%  Similarity=0.461  Sum_probs=25.9

Q ss_pred             eeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.||+|.||.||++... ++..+++|.++.
T Consensus         2 ~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~   34 (282)
T cd07831           2 KILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKK   34 (282)
T ss_pred             ceEeeccccccceEEEEEEcCCCcEEEEEEehh
Confidence            35668999999999999864 467889998864

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=94.72  E-value=0.072  Score=35.74  Aligned_cols=34  Identities=24%  Similarity=0.332  Sum_probs=27.2

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++...+.||+|+||.||++... .+..+++|.+..
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~   37 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQF   37 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeec
Confidence            4556789999999999999864 366889998753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=94.72  E-value=0.064  Score=36.25  Aligned_cols=33  Identities=39%  Similarity=0.719  Sum_probs=26.3

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.+.||+|.||.||+|... ++..+|+|.+..
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~   39 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL   39 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEecc
Confidence            445668999999999999864 457899998753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=94.72  E-value=0.073  Score=36.65  Aligned_cols=35  Identities=26%  Similarity=0.355  Sum_probs=28.4

Q ss_pred             CceeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      ++.+.+.||+|.||.||++.... +..+++|.+...
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~   37 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKK   37 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEecc
Confidence            35567789999999999998754 678999998654

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=94.71  E-value=0.049  Score=36.55  Aligned_cols=32  Identities=22%  Similarity=0.362  Sum_probs=25.5

Q ss_pred             eeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ...+.||+|+||.||+|... ++..+++|.++.
T Consensus         4 ~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~   36 (272)
T cd06629           4 VKGELIGKGTYGRVYLALNVTTGEMMAVKQVEL   36 (272)
T ss_pred             eecceecccCceEEEEEeecCCCceeeeeeeec
Confidence            34568999999999999864 467899998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=94.71  E-value=0.084  Score=34.55  Aligned_cols=34  Identities=26%  Similarity=0.413  Sum_probs=27.5

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +...+.||+|++|.||+|... ++..+++|.+...
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~   36 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELS   36 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCCCcEEEEEEeecc
Confidence            345678999999999999986 4678999988654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=94.67  E-value=0.067  Score=35.90  Aligned_cols=33  Identities=24%  Similarity=0.545  Sum_probs=26.9

Q ss_pred             eeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      .+.+.||+|+||.||+|.... +..+++|.+...
T Consensus         2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~   35 (287)
T cd07840           2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRME   35 (287)
T ss_pred             eeeEEeccCCCeEEEEEEECCCCeEEEEEEEecc
Confidence            356689999999999999754 678899998654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=94.66  E-value=0.032  Score=37.27  Aligned_cols=34  Identities=32%  Similarity=0.682  Sum_probs=27.2

Q ss_pred             CceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++.. .++..+++|.+..
T Consensus         3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~   37 (267)
T cd08229           3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQI   37 (267)
T ss_pred             hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeee
Confidence            455667899999999999996 3567889998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=94.66  E-value=0.042  Score=38.07  Aligned_cols=27  Identities=30%  Similarity=0.492  Sum_probs=22.5

Q ss_pred             EeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         61 LGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        61 iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      ||+|+||.||++.... +..+|+|.++.
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~   28 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRK   28 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            6899999999999753 56899998853

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=94.66  E-value=0.082  Score=37.14  Aligned_cols=35  Identities=26%  Similarity=0.359  Sum_probs=28.2

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||+|... .+..|++|.+..
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~   40 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVL   40 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEec
Confidence            35666789999999999999874 467899998754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=94.63  E-value=0.044  Score=36.84  Aligned_cols=37  Identities=35%  Similarity=0.539  Sum_probs=28.2

Q ss_pred             ecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecC
Q psy12538         51 DRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKM   87 (93)
Q Consensus        51 ~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~   87 (93)
                      +++++.....||+|+||.||++..+.      ...+++|.+..
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~   45 (275)
T cd05046           3 PRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQK   45 (275)
T ss_pred             ChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCC
Confidence            34566777889999999999998642      35788888753

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=94.63  E-value=0.061  Score=37.51  Aligned_cols=29  Identities=31%  Similarity=0.445  Sum_probs=23.6

Q ss_pred             ceEeeecccEEEEEEeC----CCCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWN----NTTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~----~~~~vavK~l~~   87 (93)
                      +.||+|+||.||++...    .+..+|+|.++.
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~   34 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKK   34 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEH
Confidence            47999999999998752    357899999864

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=94.62  E-value=0.075  Score=35.36  Aligned_cols=33  Identities=24%  Similarity=0.396  Sum_probs=27.4

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||++... .+..+++|.+..
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~   35 (258)
T cd05578           2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNK   35 (258)
T ss_pred             ceEEEEeccCCCceEEEEEEccCCcEEEEEEEeh
Confidence            556789999999999999975 367899998864

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=94.61  E-value=0.042  Score=37.32  Aligned_cols=37  Identities=46%  Similarity=0.633  Sum_probs=27.5

Q ss_pred             cCCceeeceEeeecccEEEEEEeCC-----------------CCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNN-----------------TTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~-----------------~~~vavK~l~~~   88 (93)
                      +..+.+.+.||+|+||.||++....                 ...+++|.+...
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~   57 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPD   57 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCc
Confidence            3456677899999999999987632                 235788887643

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG0032|consensus

Probab=94.60  E-value=0.047  Score=39.99  Aligned_cols=36  Identities=31%  Similarity=0.393  Sum_probs=29.7

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      ..+.+.+.||+|+||.||+++.+. +..+|+|.++..
T Consensus        35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~   71 (382)
T KOG0032|consen   35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKR   71 (382)
T ss_pred             ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehh
Confidence            456666899999999999999765 789999998654

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=94.59  E-value=0.07  Score=36.85  Aligned_cols=34  Identities=24%  Similarity=0.274  Sum_probs=27.0

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++... .+..+++|.++.
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~   36 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHL   36 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecc
Confidence            4567788999999999999875 356788888754

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=94.59  E-value=0.053  Score=43.22  Aligned_cols=31  Identities=16%  Similarity=0.243  Sum_probs=25.8

Q ss_pred             eeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         57 FVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        57 ~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      ..+.||+|+||.||+|.. .++..||+|.++.
T Consensus       694 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~  725 (968)
T PLN00113        694 EENVISRGKKGASYKGKSIKNGMQFVVKEIND  725 (968)
T ss_pred             cccEEccCCCeeEEEEEECCCCcEEEEEEccC
Confidence            346899999999999997 4567999999864

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=94.58  E-value=0.047  Score=37.20  Aligned_cols=38  Identities=21%  Similarity=0.383  Sum_probs=29.7

Q ss_pred             EecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .+...+.+.+.||+|.||.||+|.... +..+++|.+..
T Consensus         9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~   47 (292)
T cd06644           9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIET   47 (292)
T ss_pred             CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEecc
Confidence            334556677889999999999998754 67888998754

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>PHA02988 hypothetical protein; Provisional

Probab=94.57  E-value=0.059  Score=36.95  Aligned_cols=39  Identities=21%  Similarity=0.368  Sum_probs=30.0

Q ss_pred             eeEecCCceee--ceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         48 WEIDRNSLKFV--RKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~--~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      +.++..++...  ..|++|++|.||+|.+.+ ..||+|.++.
T Consensus        13 ~~i~~~~i~~~~~~~i~~g~~~~v~~~~~~~-~~vavK~~~~   53 (283)
T PHA02988         13 KCIESDDIDKYTSVLIKENDQNSIYKGIFNN-KEVIIRTFKK   53 (283)
T ss_pred             eecCHHHcCCCCCeEEeeCCceEEEEEEECC-EEEEEEeccc
Confidence            44555555555  579999999999999965 6899999864

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=94.56  E-value=0.022  Score=38.19  Aligned_cols=35  Identities=26%  Similarity=0.602  Sum_probs=28.2

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .++.+.+.||+|+||.||++... .+..+++|.++.
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~   44 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKL   44 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEec
Confidence            45666788999999999999864 467889998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=94.53  E-value=0.047  Score=36.38  Aligned_cols=30  Identities=43%  Similarity=0.712  Sum_probs=23.6

Q ss_pred             ceEeeecccEEEEEEeCC----CCeEEEEEecCC
Q psy12538         59 RKLGSGQFGEVWEGLWNN----TTPVAIKTLKMG   88 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~~----~~~vavK~l~~~   88 (93)
                      +.||+|+||.||+|.+..    ...+++|.+...
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~   34 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQE   34 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccc
Confidence            368999999999998743    257899988654

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=94.53  E-value=0.094  Score=34.74  Aligned_cols=35  Identities=26%  Similarity=0.359  Sum_probs=28.6

Q ss_pred             CceeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      ++.+.+.||+|++|.+|++.... +..+++|.+...
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~   37 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVD   37 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccC
Confidence            45667899999999999999764 678999988654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=94.52  E-value=0.073  Score=36.17  Aligned_cols=33  Identities=27%  Similarity=0.478  Sum_probs=26.5

Q ss_pred             ceeeceEeeecccEEEEEEe----CCCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~----~~~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||.+..    .++..+|+|.++.
T Consensus         2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~   38 (290)
T cd05613           2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKK   38 (290)
T ss_pred             ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeeh
Confidence            45677899999999999885    2467899998864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=94.51  E-value=0.048  Score=36.07  Aligned_cols=35  Identities=29%  Similarity=0.611  Sum_probs=28.6

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|.||.||++.+.. +..+++|.++.
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~   38 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPV   38 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeec
Confidence            456667789999999999999864 57889998764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=94.50  E-value=0.1  Score=34.61  Aligned_cols=33  Identities=24%  Similarity=0.476  Sum_probs=26.8

Q ss_pred             eeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ...+.||+|.||.||+|... ++..+++|.++..
T Consensus         3 ~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~   36 (264)
T cd06626           3 QRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQ   36 (264)
T ss_pred             eeeeEeecCCCcEEEEEEECCCCcEEEEEEEECc
Confidence            44578999999999999864 4678999998654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=94.48  E-value=0.084  Score=36.30  Aligned_cols=35  Identities=14%  Similarity=0.343  Sum_probs=28.2

Q ss_pred             CceeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      ++.+.+.||+|+||.||++.... +..|++|.++..
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~   37 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQ   37 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehh
Confidence            45667889999999999998754 568999988643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=94.47  E-value=0.04  Score=37.52  Aligned_cols=38  Identities=39%  Similarity=0.600  Sum_probs=28.8

Q ss_pred             EecCCceeeceEeeecccEEEEEEeC------CCCeEEEEEecC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWN------NTTPVAIKTLKM   87 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~------~~~~vavK~l~~   87 (93)
                      +.+.++.+.+.||+|+||.||++...      ....+++|.+..
T Consensus         2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~   45 (288)
T cd05093           2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD   45 (288)
T ss_pred             CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCC
Confidence            34567788889999999999999752      234578888754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=94.47  E-value=0.079  Score=36.06  Aligned_cols=34  Identities=24%  Similarity=0.531  Sum_probs=27.8

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|.||.||+|... ++..+++|.+..
T Consensus         3 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~   37 (294)
T PLN00009          3 QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRL   37 (294)
T ss_pred             ceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhh
Confidence            4566778999999999999975 467899998754

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=94.44  E-value=0.09  Score=34.74  Aligned_cols=33  Identities=24%  Similarity=0.574  Sum_probs=26.9

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.+.||+|.||.+|++... ++..+++|.+..
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~   35 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDL   35 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeeh
Confidence            456678999999999999975 467889998754

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=94.42  E-value=0.054  Score=35.84  Aligned_cols=29  Identities=41%  Similarity=0.801  Sum_probs=24.7

Q ss_pred             eEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         60 KLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      .||+|+||.||++....+..+++|.+...
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~   30 (251)
T cd05041           2 KIGKGNFGDVYKGVLKGNTEVAVKTCRST   30 (251)
T ss_pred             ccccCCCceEEEEEEeCCCcEEEEecccc
Confidence            68999999999999866789999987653

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=94.41  E-value=0.094  Score=36.86  Aligned_cols=41  Identities=29%  Similarity=0.509  Sum_probs=32.2

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..|++.. .+.+...||+|.||.||+|... ++..+++|.+..
T Consensus         9 ~~~~~~~-~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~   50 (343)
T cd07851           9 TVWEVPD-RYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSR   50 (343)
T ss_pred             ceecccC-ceEEEEEeccCCceEEEEEEECCCCcEEEEEeccc
Confidence            3466653 5777889999999999999975 467899998754

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=94.40  E-value=0.042  Score=37.41  Aligned_cols=34  Identities=26%  Similarity=0.430  Sum_probs=27.9

Q ss_pred             CceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      ++.+.+.||+|.||.||+|.++. +..+++|.++.
T Consensus         6 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~   40 (293)
T cd07843           6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKM   40 (293)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEee
Confidence            45566789999999999999863 66889998864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=94.37  E-value=0.049  Score=37.07  Aligned_cols=27  Identities=37%  Similarity=0.413  Sum_probs=22.4

Q ss_pred             EeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         61 LGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        61 iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ||+|+||.||++... .+..+|+|.+..
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~   28 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNK   28 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeH
Confidence            689999999999874 457899999854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=94.36  E-value=0.053  Score=37.33  Aligned_cols=35  Identities=51%  Similarity=0.877  Sum_probs=26.0

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-C----CeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-T----TPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~----~~vavK~l~~   87 (93)
                      .++...+.||+|+||.||+|.+.. +    ..+++|.+..
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~   46 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNE   46 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccc
Confidence            455566789999999999998732 2    2478888754

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=94.32  E-value=0.06  Score=36.19  Aligned_cols=29  Identities=34%  Similarity=0.619  Sum_probs=22.6

Q ss_pred             eEeeecccEEEEEEeCC---CCeEEEEEecCC
Q psy12538         60 KLGSGQFGEVWEGLWNN---TTPVAIKTLKMG   88 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~~---~~~vavK~l~~~   88 (93)
                      .||+|+||.||+|.+.+   ...+++|.++..
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~   33 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVS   33 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCC
Confidence            58999999999998743   346888887643

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=94.32  E-value=0.11  Score=34.51  Aligned_cols=35  Identities=29%  Similarity=0.594  Sum_probs=28.0

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .++.+.+.||+|.||.||++... ....+++|.+..
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~   38 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKL   38 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEc
Confidence            45667788999999999999874 356789998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG4250|consensus

Probab=94.31  E-value=0.012  Score=46.02  Aligned_cols=35  Identities=40%  Similarity=0.741  Sum_probs=28.3

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      ..|+.+       +.||+|+||.||+|+. ..+..||||.++.
T Consensus        13 y~W~~~-------e~LG~Ga~g~V~rgrnketG~~vAvK~~~~   48 (732)
T KOG4250|consen   13 YLWEMD-------ERLGKGAFGNVYRGRNKETGRLVAVKTFNK   48 (732)
T ss_pred             cceeeh-------hhhcCCccceeeeecccccccchhHHhhhh
Confidence            457654       4799999999999995 4578999999865

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=94.31  E-value=0.11  Score=35.13  Aligned_cols=33  Identities=27%  Similarity=0.557  Sum_probs=26.7

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +...+.||.|.||.||++... .+..+++|.++.
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~   35 (284)
T cd07860           2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL   35 (284)
T ss_pred             ceeeeeecCCCceEEEEEEECCCCCEEEEEEccc
Confidence            445678999999999999874 467899998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=94.30  E-value=0.076  Score=35.69  Aligned_cols=33  Identities=24%  Similarity=0.520  Sum_probs=26.5

Q ss_pred             ceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      +...+.||+|.||.||+|.. .++..+++|.++.
T Consensus         3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~   36 (277)
T cd06917           3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINL   36 (277)
T ss_pred             hhhhhheeccCCceEEEEEEcCCCcEEEEEEecC
Confidence            34556899999999999997 3467899998854

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=94.29  E-value=0.051  Score=36.03  Aligned_cols=28  Identities=43%  Similarity=0.871  Sum_probs=23.2

Q ss_pred             eEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         60 KLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .||+|+||.||++... ++..+++|.+..
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~   30 (252)
T cd05084           2 RIGRGNFGEVFSGRLRADNTPVAVKSCRE   30 (252)
T ss_pred             ccCcccCccEEEEEEecCCceEEEEecCc
Confidence            5899999999999974 467889998753

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=94.28  E-value=0.11  Score=34.71  Aligned_cols=32  Identities=28%  Similarity=0.470  Sum_probs=25.5

Q ss_pred             eeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         57 FVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        57 ~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +...||+|+||.||+|... .+..+++|.+...
T Consensus         4 ~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~   36 (267)
T cd06628           4 KGALIGSGSFGSVYLGMNASSGELMAVKQVELP   36 (267)
T ss_pred             ccceeecCCCeEEEEEEecCCCcEEEEEEecCC
Confidence            4568999999999999864 4568899987543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=94.25  E-value=0.11  Score=34.26  Aligned_cols=33  Identities=18%  Similarity=0.355  Sum_probs=26.2

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||++... .+..+++|.++.
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~   35 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDY   35 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEec
Confidence            345678999999999999864 456889998854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=94.20  E-value=0.11  Score=35.62  Aligned_cols=34  Identities=26%  Similarity=0.432  Sum_probs=27.6

Q ss_pred             CceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||++.. ..+..|++|.+..
T Consensus        20 ~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~   54 (297)
T cd06656          20 KYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNL   54 (297)
T ss_pred             hceeeeeeccCCCeEEEEEEECCCCCEEEEEEEec
Confidence            455667899999999999986 3467899998864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG1989|consensus

Probab=94.18  E-value=0.21  Score=39.64  Aligned_cols=42  Identities=14%  Similarity=0.249  Sum_probs=36.0

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeCCC-CeEEEEEec
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLK   86 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~-~~vavK~l~   86 (93)
                      ....++....+.+.+.|.+|+|+.||.+....+ ..+|+|.+-
T Consensus        29 G~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~   71 (738)
T KOG1989|consen   29 GQTFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMY   71 (738)
T ss_pred             ceEEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeee
Confidence            356889999999999999999999999997654 788998863

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=94.17  E-value=0.13  Score=33.70  Aligned_cols=34  Identities=18%  Similarity=0.484  Sum_probs=27.4

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +.+.+.||+|+||.||++... ++..+++|.+...
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~   36 (258)
T cd08215           2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLS   36 (258)
T ss_pred             ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecc
Confidence            445678999999999999975 4678999998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=94.13  E-value=0.077  Score=36.13  Aligned_cols=28  Identities=32%  Similarity=0.421  Sum_probs=23.1

Q ss_pred             eEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         60 KLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .||+|+||.||++... .+..+|+|.+..
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~   29 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDK   29 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEc
Confidence            3799999999999874 467899998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=94.12  E-value=0.11  Score=35.28  Aligned_cols=33  Identities=30%  Similarity=0.441  Sum_probs=26.1

Q ss_pred             ceeeceEeeecccEEEEEEeC----CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN----NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~----~~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||++...    .+..+++|.++.
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~   38 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKK   38 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEeh
Confidence            456778999999999998753    356799998853

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>PRK14879 serine/threonine protein kinase; Provisional

Probab=94.12  E-value=0.076  Score=34.61  Aligned_cols=28  Identities=18%  Similarity=0.153  Sum_probs=22.6

Q ss_pred             ceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      +.||+|++|.||+|.+.+ ..+++|....
T Consensus         2 ~~l~~G~~~~vy~~~~~~-~~~~vK~~~~   29 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLG-IKAVIKWRIP   29 (211)
T ss_pred             cccccCceEEEEEEeeCC-CceEEEEeCC
Confidence            468999999999999854 5788887653

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=94.06  E-value=0.15  Score=41.86  Aligned_cols=40  Identities=25%  Similarity=0.382  Sum_probs=31.0

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .+.....+.+...||+|+||.||++.... ...+++|.+..
T Consensus         8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~   48 (1021)
T PTZ00266          8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISY   48 (1021)
T ss_pred             CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEec
Confidence            33444578888899999999999998754 56788888764

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=94.06  E-value=0.14  Score=34.78  Aligned_cols=36  Identities=19%  Similarity=0.459  Sum_probs=28.9

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..++.+.+.||+|.||.||++... ++..+++|.+..
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~   57 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDP   57 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecc
Confidence            345667778999999999999874 467889998854

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=94.05  E-value=0.13  Score=35.88  Aligned_cols=34  Identities=29%  Similarity=0.450  Sum_probs=27.5

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||++... .+..+++|.+..
T Consensus         6 ~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~   40 (334)
T cd07855           6 RYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPH   40 (334)
T ss_pred             ceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecc
Confidence            4555678999999999999864 467899998864

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=94.04  E-value=0.06  Score=36.52  Aligned_cols=37  Identities=32%  Similarity=0.527  Sum_probs=28.1

Q ss_pred             ecCCceeeceEeeecccEEEEEEeC------CCCeEEEEEecC
Q psy12538         51 DRNSLKFVRKLGSGQFGEVWEGLWN------NTTPVAIKTLKM   87 (93)
Q Consensus        51 ~~~~~~~~~~iG~G~fG~V~~g~~~------~~~~vavK~l~~   87 (93)
                      .+.++.+.+.||+|+||.||++...      ....+++|.++.
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~   45 (280)
T cd05092           3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE   45 (280)
T ss_pred             ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCc
Confidence            4556777889999999999999742      234778888754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=94.00  E-value=0.11  Score=34.50  Aligned_cols=34  Identities=24%  Similarity=0.349  Sum_probs=27.1

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++...+.||+|+||.||++... .+..+++|.+..
T Consensus         3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~   37 (263)
T cd06625           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPF   37 (263)
T ss_pred             cccccceecCCCceEEEEEEEcCCCcEEEEEEEee
Confidence            4556779999999999999863 467899998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=93.99  E-value=0.068  Score=36.32  Aligned_cols=27  Identities=41%  Similarity=0.448  Sum_probs=22.4

Q ss_pred             EeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         61 LGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        61 iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      ||+|+||.||++..+. +..+|+|.+..
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~   28 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDK   28 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcH
Confidence            6899999999998753 67899998853

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=93.96  E-value=0.084  Score=35.90  Aligned_cols=33  Identities=39%  Similarity=0.505  Sum_probs=25.0

Q ss_pred             ceeeceEeeecccEEEEEEeCC------CCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||+|....      ...+++|.+..
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~   40 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKE   40 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCC
Confidence            4566789999999999998532      24678888754

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0583|consensus

Probab=93.94  E-value=0.095  Score=38.14  Aligned_cols=35  Identities=34%  Similarity=0.452  Sum_probs=28.2

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+...||+|+||.|+.|... .+..||+|.++.
T Consensus        17 g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~   52 (370)
T KOG0583|consen   17 GKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDR   52 (370)
T ss_pred             CceeeeeeecCCCCeeEEEeeeccCCCeEEEEEech
Confidence            35566778999999999999863 458999997755

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=93.90  E-value=0.11  Score=36.08  Aligned_cols=29  Identities=34%  Similarity=0.460  Sum_probs=23.3

Q ss_pred             ceEeeecccEEEEEEe----CCCCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLW----NNTTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~----~~~~~vavK~l~~   87 (93)
                      +.||+|+||.||++..    ..+..+|+|.++.
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~   34 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKK   34 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEH
Confidence            4699999999998874    2367899999864

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=93.88  E-value=0.15  Score=33.44  Aligned_cols=34  Identities=32%  Similarity=0.504  Sum_probs=27.2

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +.+.+.||+|.||.+|++... .+..+++|.+...
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~   36 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLE   36 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccc
Confidence            445678999999999999875 3568999998654

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=93.87  E-value=0.17  Score=33.39  Aligned_cols=34  Identities=26%  Similarity=0.365  Sum_probs=26.9

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +.+.+.||+|.||.||++... ....+++|.+...
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~   36 (256)
T cd08220           2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVE   36 (256)
T ss_pred             ceEEEEecccCceEEEEEEEcCCCcEEEEEEEecc
Confidence            455678999999999998864 4678899988543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=93.85  E-value=0.083  Score=34.76  Aligned_cols=30  Identities=57%  Similarity=0.871  Sum_probs=24.5

Q ss_pred             ceEeeecccEEEEEEeCC----CCeEEEEEecCC
Q psy12538         59 RKLGSGQFGEVWEGLWNN----TTPVAIKTLKMG   88 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~~----~~~vavK~l~~~   88 (93)
                      +.||+|+||.||++....    ...+++|.++..
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~   34 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKED   34 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccc
Confidence            368999999999999753    568899998654

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=93.81  E-value=0.12  Score=36.07  Aligned_cols=33  Identities=27%  Similarity=0.486  Sum_probs=26.5

Q ss_pred             ceeeceEeeecccEEEEEEeCC---CCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWNN---TTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~~---~~~vavK~l~~   87 (93)
                      +.+.+.||+|.||.||++....   +..+|+|.+..
T Consensus         2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~   37 (332)
T cd07857           2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITN   37 (332)
T ss_pred             ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecc
Confidence            4566789999999999999743   56899998753

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=93.81  E-value=0.067  Score=35.60  Aligned_cols=34  Identities=29%  Similarity=0.510  Sum_probs=27.3

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +.+.+.||+|+||.||++... .+..+++|.+...
T Consensus         3 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~   37 (265)
T cd06605           3 LEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLE   37 (265)
T ss_pred             chHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecc
Confidence            455678999999999999985 3678899987653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=93.80  E-value=0.097  Score=35.34  Aligned_cols=35  Identities=26%  Similarity=0.544  Sum_probs=27.2

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|.||.||+|... .+..+++|.+..
T Consensus        16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~   51 (282)
T cd06636          16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDV   51 (282)
T ss_pred             hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEec
Confidence            34555678999999999999974 466889998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=93.73  E-value=0.16  Score=33.04  Aligned_cols=34  Identities=35%  Similarity=0.676  Sum_probs=27.3

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +...+.||+|.||.+|++... ++..+++|.+...
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~   36 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLE   36 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEeccc
Confidence            345678999999999999985 4678999988654

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0615|consensus

Probab=93.72  E-value=0.097  Score=39.08  Aligned_cols=34  Identities=32%  Similarity=0.362  Sum_probs=27.9

Q ss_pred             CceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.|-+|.- +.+..||||.+..
T Consensus       173 ~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~k  207 (475)
T KOG0615|consen  173 YYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINK  207 (475)
T ss_pred             eeEeeeeecCCceeEEEEEEEcccCcEEEeeeeeh
Confidence            445567899999999999986 4578999999864

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=93.72  E-value=0.098  Score=36.45  Aligned_cols=31  Identities=32%  Similarity=0.402  Sum_probs=25.5

Q ss_pred             eeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         57 FVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        57 ~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.||+|.||.||++... .+..||+|.++.
T Consensus        13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~   44 (335)
T PTZ00024         13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKI   44 (335)
T ss_pred             hhhcccCCCceeEEEEEECCCCCeEEEEEeec
Confidence            4567999999999999864 467899998854

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=93.72  E-value=0.14  Score=35.51  Aligned_cols=33  Identities=27%  Similarity=0.482  Sum_probs=27.2

Q ss_pred             ceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      +.+.+.||+|.||.||++.... +..+++|.+..
T Consensus         2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~   35 (330)
T cd07834           2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISN   35 (330)
T ss_pred             ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecc
Confidence            4566789999999999999754 67899998864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=93.69  E-value=0.1  Score=35.45  Aligned_cols=28  Identities=32%  Similarity=0.421  Sum_probs=22.9

Q ss_pred             eEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         60 KLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .||+|+||.||++... .+..||+|.+..
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~   29 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDK   29 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeec
Confidence            3799999999999864 467899998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0592|consensus

Probab=93.68  E-value=0.032  Score=42.73  Aligned_cols=37  Identities=30%  Similarity=0.355  Sum_probs=30.7

Q ss_pred             ecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         51 DRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        51 ~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..++|.|++.||+|+|..|++++-. .+..+|||++..
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K  108 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDK  108 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhH
Confidence            3468899999999999999999864 467889998753

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=93.68  E-value=0.16  Score=33.71  Aligned_cols=33  Identities=24%  Similarity=0.368  Sum_probs=26.4

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.+|.+... ++..+++|.+..
T Consensus         2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~   35 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINI   35 (256)
T ss_pred             ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEh
Confidence            455678999999999998863 467899998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=93.61  E-value=0.14  Score=34.44  Aligned_cols=31  Identities=29%  Similarity=0.530  Sum_probs=25.5

Q ss_pred             eeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         57 FVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        57 ~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.||.|.+|.||+|... ++..+++|.+..
T Consensus         3 ~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~   34 (283)
T cd07835           3 KVEKIGEGTYGVVYKARDKLTGEIVALKKIRL   34 (283)
T ss_pred             hheEecCCCCeEEEEEEEcCCCCEEEEEEeec
Confidence            4567999999999999874 467899998854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=93.61  E-value=0.19  Score=34.47  Aligned_cols=34  Identities=24%  Similarity=0.408  Sum_probs=27.0

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||+|... .+..+++|.+..
T Consensus        21 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~   55 (296)
T cd06654          21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL   55 (296)
T ss_pred             ceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEec
Confidence            4455678999999999999863 467899998864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=93.59  E-value=0.13  Score=35.36  Aligned_cols=34  Identities=29%  Similarity=0.415  Sum_probs=27.1

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+...+.||+|.||.||+|... ++..|++|.+..
T Consensus        16 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~   50 (307)
T cd06607          16 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSY   50 (307)
T ss_pred             hhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEec
Confidence            3555678999999999999874 467899998753

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=93.59  E-value=0.046  Score=41.61  Aligned_cols=31  Identities=19%  Similarity=0.318  Sum_probs=27.9

Q ss_pred             ceEeeecccEEEEEEeCCCCeEEEEEecCCC
Q psy12538         59 RKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS   89 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~~~~~vavK~l~~~~   89 (93)
                      +.|++++.|+||+|++++++.||||++.++-
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi  161 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGI  161 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCCh
Confidence            5789999999999999988999999998753

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=93.58  E-value=0.07  Score=36.18  Aligned_cols=34  Identities=41%  Similarity=0.577  Sum_probs=26.8

Q ss_pred             CceeeceEeeecccEEEEEEeC-----CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-----NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-----~~~~vavK~l~~   87 (93)
                      .+...+.||+|+||.||.+.+.     .+..+++|.++.
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~   43 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKP   43 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCc
Confidence            4556678999999999999852     356899999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=93.58  E-value=0.16  Score=33.55  Aligned_cols=33  Identities=33%  Similarity=0.480  Sum_probs=26.6

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.+.||.|+||.||.+... ++..+++|.+..
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~   35 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNL   35 (257)
T ss_pred             ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEeh
Confidence            456778999999999999864 356899998854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=93.52  E-value=0.073  Score=35.34  Aligned_cols=30  Identities=50%  Similarity=0.877  Sum_probs=23.4

Q ss_pred             eEeeecccEEEEEEeCC----CCeEEEEEecCCC
Q psy12538         60 KLGSGQFGEVWEGLWNN----TTPVAIKTLKMGS   89 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~~----~~~vavK~l~~~~   89 (93)
                      .||+|+||.||+|.+..    ...+++|.+....
T Consensus         2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~   35 (257)
T cd05040           2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDK   35 (257)
T ss_pred             cCCccCcccEEeeeEecCCCCceEEEEeecCCcc
Confidence            58999999999999743    2358999886543

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=93.47  E-value=0.18  Score=35.53  Aligned_cols=35  Identities=29%  Similarity=0.329  Sum_probs=28.2

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+...+.||+|+||.||++... .+..+|+|.+..
T Consensus        16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~   51 (353)
T cd07850          16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSR   51 (353)
T ss_pred             cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCc
Confidence            34666778999999999999864 467899998853

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=93.40  E-value=0.059  Score=36.35  Aligned_cols=34  Identities=24%  Similarity=0.475  Sum_probs=27.3

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|.||.||++.+. .+..+++|.+..
T Consensus         6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~   40 (280)
T cd06611           6 IWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQI   40 (280)
T ss_pred             HHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEee
Confidence            4556678999999999999975 457889998754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=93.38  E-value=0.2  Score=32.15  Aligned_cols=33  Identities=36%  Similarity=0.510  Sum_probs=26.9

Q ss_pred             eeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      .+.+.||+|.+|.||++.... +..+++|.+...
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~   35 (225)
T smart00221        2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKE   35 (225)
T ss_pred             ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccc
Confidence            345789999999999999864 678999998653

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PHA03207 serine/threonine kinase US3; Provisional

Probab=93.37  E-value=0.16  Score=36.59  Aligned_cols=35  Identities=20%  Similarity=0.240  Sum_probs=27.3

Q ss_pred             CCceeeceEeeecccEEEEEEeCC---CCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN---TTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~---~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++...+   ...|++|.+..
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~  129 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTG  129 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccc
Confidence            457777899999999999987533   45788888754

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=93.37  E-value=0.093  Score=33.93  Aligned_cols=26  Identities=15%  Similarity=0.144  Sum_probs=21.5

Q ss_pred             eEeeecccEEEEEEeCCCCeEEEEEec
Q psy12538         60 KLGSGQFGEVWEGLWNNTTPVAIKTLK   86 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~~~~~vavK~l~   86 (93)
                      .||+|+||.||+|.+.+ ..+++|...
T Consensus         1 ~ig~G~~~~vy~~~~~~-~~~viK~~~   26 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLG-LKAVIKERV   26 (199)
T ss_pred             CCCCCceEEEEEeecCC-ccEEEEEec
Confidence            37999999999999765 578888854

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=93.36  E-value=0.15  Score=33.97  Aligned_cols=32  Identities=22%  Similarity=0.332  Sum_probs=25.6

Q ss_pred             eeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         56 KFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      ...+.||+|.||.||++.. .++..+++|.+..
T Consensus         3 ~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~   35 (268)
T cd06630           3 LKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTY   35 (268)
T ss_pred             cccceecCcCceEEEEEEEcCCCcEEEEEEeec
Confidence            3456899999999999986 4467899998864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=93.35  E-value=0.054  Score=36.80  Aligned_cols=15  Identities=27%  Similarity=0.627  Sum_probs=13.7

Q ss_pred             eEeeecccEEEEEEe
Q psy12538         60 KLGSGQFGEVWEGLW   74 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~   74 (93)
                      +||+|+||.||+|.+
T Consensus         2 ~lG~G~~~~vy~g~~   16 (274)
T cd05076           2 HLGQGTRTNIYDGRL   16 (274)
T ss_pred             CcCcccccceeccee
Confidence            689999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=93.25  E-value=0.16  Score=34.38  Aligned_cols=33  Identities=42%  Similarity=0.543  Sum_probs=25.3

Q ss_pred             eeeceEeeecccEEEEEEeC-----CCCeEEEEEecCC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWN-----NTTPVAIKTLKMG   88 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~-----~~~~vavK~l~~~   88 (93)
                      .+.+.||+|+||.||.+.+.     .+..+|+|.++..
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~   44 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRE   44 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccc
Confidence            45678999999999887642     3568999998653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=93.20  E-value=0.1  Score=35.01  Aligned_cols=29  Identities=48%  Similarity=0.724  Sum_probs=22.7

Q ss_pred             eEeeecccEEEEEEeC---CCCeEEEEEecCC
Q psy12538         60 KLGSGQFGEVWEGLWN---NTTPVAIKTLKMG   88 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~---~~~~vavK~l~~~   88 (93)
                      .||+|+||.||+|.+.   .+..||+|.+...
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~   33 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNE   33 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccc
Confidence            3899999999999874   2346899988653

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>PHA03211 serine/threonine kinase US3; Provisional

Probab=93.17  E-value=0.15  Score=37.99  Aligned_cols=32  Identities=25%  Similarity=0.311  Sum_probs=26.2

Q ss_pred             CceeeceEeeecccEEEEEEeCC-CCeEEEEEe
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTL   85 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l   85 (93)
                      .+.+...||+|+||.||++.... +..|++|..
T Consensus       170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~  202 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAG  202 (461)
T ss_pred             CeEEEEEEccCCCeEEEEEEECCCCCEEEEecc
Confidence            46667889999999999999754 568899864

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=93.16  E-value=0.14  Score=35.51  Aligned_cols=35  Identities=29%  Similarity=0.411  Sum_probs=27.5

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+...+.||+|+||.||++... ++..+++|.+..
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~   60 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSY   60 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEec
Confidence            34555678999999999999864 467889998853

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=93.16  E-value=0.19  Score=33.40  Aligned_cols=35  Identities=26%  Similarity=0.546  Sum_probs=28.0

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|.||.+|++... .+..+++|.+..
T Consensus         6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~   41 (275)
T cd06608           6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDI   41 (275)
T ss_pred             hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEec
Confidence            45566778999999999999975 356889998764

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=93.09  E-value=0.2  Score=35.03  Aligned_cols=39  Identities=31%  Similarity=0.373  Sum_probs=29.9

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      |++. ..+.+.+.||.|.||.||++... .+..+++|.+..
T Consensus         6 ~~~~-~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~   45 (328)
T cd07856           6 FEIT-NRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMK   45 (328)
T ss_pred             eccc-cceEEEEeecccCCeEEEEEEECCCCCEEEEEEecc
Confidence            4443 35677789999999999999864 467899998743

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=93.03  E-value=0.13  Score=34.24  Aligned_cols=29  Identities=31%  Similarity=0.430  Sum_probs=23.9

Q ss_pred             ceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.||+|.||.||++... .+..+|+|.++.
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~   31 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKK   31 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecc
Confidence            46899999999999874 357899998854

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0198|consensus

Probab=93.02  E-value=0.1  Score=37.41  Aligned_cols=35  Identities=23%  Similarity=0.387  Sum_probs=27.9

Q ss_pred             CceeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      +....+.||+|+||.||.+.... +...|||.....
T Consensus        18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~   53 (313)
T KOG0198|consen   18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELE   53 (313)
T ss_pred             hhhhhccccCccceEEEEEEecCCCcceeeeeeecc
Confidence            34456789999999999999753 678899988654

>KOG0661|consensus

Probab=93.01  E-value=0.012  Score=44.35  Aligned_cols=35  Identities=37%  Similarity=0.541  Sum_probs=27.4

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||.|.||+||+|.-. .+..||||..+..
T Consensus        11 RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~K   46 (538)
T KOG0661|consen   11 RYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKK   46 (538)
T ss_pred             HHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhh
Confidence            3445578999999999999863 3568999988654

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=92.97  E-value=0.12  Score=34.81  Aligned_cols=33  Identities=30%  Similarity=0.636  Sum_probs=26.6

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||+|... ++..+++|.+..
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~   36 (274)
T cd06609           3 FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDL   36 (274)
T ss_pred             hhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeec
Confidence            445678999999999999975 467899998754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=92.95  E-value=0.12  Score=34.38  Aligned_cols=28  Identities=32%  Similarity=0.593  Sum_probs=21.9

Q ss_pred             eEeeecccEEEEEEeCC----CCeEEEEEecC
Q psy12538         60 KLGSGQFGEVWEGLWNN----TTPVAIKTLKM   87 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~~----~~~vavK~l~~   87 (93)
                      .||+|+||.||+|.+..    ...+|+|.+..
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~   33 (262)
T cd05058           2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNR   33 (262)
T ss_pred             cccccCCceEEEEEEecCCCceEEEEEEecCc
Confidence            58999999999998632    34788998743

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=92.92  E-value=0.096  Score=35.27  Aligned_cols=28  Identities=29%  Similarity=0.509  Sum_probs=21.3

Q ss_pred             eEeeecccEEEEEEeCC-------------CCeEEEEEecC
Q psy12538         60 KLGSGQFGEVWEGLWNN-------------TTPVAIKTLKM   87 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~~-------------~~~vavK~l~~   87 (93)
                      .||+|+||.||+|.+..             ...|++|.+..
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~   42 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDP   42 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecCh
Confidence            68999999999998632             22578888754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=92.89  E-value=0.23  Score=34.05  Aligned_cols=34  Identities=26%  Similarity=0.413  Sum_probs=26.5

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||++... ++..+++|.+..
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~   54 (293)
T cd06647          20 KYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNL   54 (293)
T ss_pred             hceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecc
Confidence            4455678999999999999853 456889998753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG0577|consensus

Probab=92.88  E-value=0.083  Score=41.49  Aligned_cols=28  Identities=39%  Similarity=0.618  Sum_probs=23.4

Q ss_pred             ceEeeecccEEEEEEe-CCCCeEEEEEec
Q psy12538         59 RKLGSGQFGEVWEGLW-NNTTPVAIKTLK   86 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~-~~~~~vavK~l~   86 (93)
                      ..||.|+||.||-++. .+...||||+..
T Consensus        32 rEIGHGSFGAVYfArd~~n~evVAIKKMs   60 (948)
T KOG0577|consen   32 REIGHGSFGAVYFARDVRNSEVVAIKKMS   60 (948)
T ss_pred             HHhcCCccceeEEeeccCccceeeeeecc
Confidence            4699999999999986 456799999863

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=92.85  E-value=0.3  Score=33.55  Aligned_cols=34  Identities=26%  Similarity=0.415  Sum_probs=27.5

Q ss_pred             CceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      .+.+.+.||.|.||.||+|.. ..+..+++|.+..
T Consensus        20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~   54 (296)
T cd06655          20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINL   54 (296)
T ss_pred             eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEec
Confidence            466677899999999999985 3467899998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0574|consensus

Probab=92.84  E-value=0.0051  Score=44.54  Aligned_cols=37  Identities=27%  Similarity=0.520  Sum_probs=29.1

Q ss_pred             cCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      .+.|-+..+||+|+||+||++..+. +..+|||.+..+
T Consensus        32 EEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~   69 (502)
T KOG0574|consen   32 EEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD   69 (502)
T ss_pred             HHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc
Confidence            3455566789999999999998754 779999987643

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=92.83  E-value=0.23  Score=32.72  Aligned_cols=33  Identities=27%  Similarity=0.529  Sum_probs=26.5

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.+|++... ++..+++|.++.
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~   35 (256)
T cd08530           2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDL   35 (256)
T ss_pred             ceEeeeecCCCceeEEEEEECCCCCEEEEEEEeh
Confidence            456678999999999999864 456889998764

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=92.82  E-value=0.1  Score=35.28  Aligned_cols=33  Identities=36%  Similarity=0.713  Sum_probs=26.1

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +...+.||+|+||.||+|... .+..+++|.++.
T Consensus         6 y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~   39 (277)
T cd06640           6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDL   39 (277)
T ss_pred             hhhhhhcccCCCeEEEEEEEccCCEEEEEEEEec
Confidence            344567999999999999874 366889998764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=92.80  E-value=0.1  Score=34.54  Aligned_cols=29  Identities=28%  Similarity=0.602  Sum_probs=21.5

Q ss_pred             ceEeeecccEEEEEEeCCCC-----------eEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWNNTT-----------PVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~~~~-----------~vavK~l~~   87 (93)
                      +.||+|+||.||+|......           .+++|.+..
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~   40 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGS   40 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeecccc
Confidence            36899999999999985422           467777654

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=92.67  E-value=0.09  Score=36.71  Aligned_cols=33  Identities=30%  Similarity=0.629  Sum_probs=27.0

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      .+.+.+.||+|.||.||+|... ++..+++|.+.
T Consensus         8 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~   41 (337)
T cd07852           8 KYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIF   41 (337)
T ss_pred             HHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeec
Confidence            4566788999999999999975 46688999874

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=92.58  E-value=0.09  Score=35.47  Aligned_cols=32  Identities=38%  Similarity=0.720  Sum_probs=25.3

Q ss_pred             eeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ...+.||+|.||.||+|... .+..|++|.++.
T Consensus         7 ~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~   39 (277)
T cd06642           7 TKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDL   39 (277)
T ss_pred             HHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecc
Confidence            34567999999999999864 356889998764

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>KOG4258|consensus

Probab=92.57  E-value=0.026  Score=45.18  Aligned_cols=32  Identities=47%  Similarity=0.915  Sum_probs=27.9

Q ss_pred             CCCceeEecCCceeeceEeeecccEEEEEEeCC
Q psy12538         44 TRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN   76 (93)
Q Consensus        44 ~~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~   76 (93)
                      ..++||+.++ +.+...+|+|+||.||.|.-++
T Consensus       986 v~deWe~~r~-it~~relg~gsfg~Vy~g~~nn 1017 (1025)
T KOG4258|consen  986 VPDEWEVSRE-ITLGRELGQGSFGMVYEGNANN 1017 (1025)
T ss_pred             ChhHHHHHHH-HhhhhhhccCccceEEEecCCc
Confidence            4578999998 8888999999999999998654

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=92.57  E-value=0.2  Score=33.58  Aligned_cols=32  Identities=28%  Similarity=0.513  Sum_probs=26.1

Q ss_pred             eeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         57 FVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        57 ~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      +.+.||+|.||.||+|.... +..+++|.+...
T Consensus         3 ~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~   35 (282)
T cd07829           3 KLEKLGEGTYGVVYKARDKKTGEIVALKKIRLD   35 (282)
T ss_pred             eehcccccCcceEEEeeecCCCcEEEEEEeccc
Confidence            45679999999999999754 678999988653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG1164|consensus

Probab=92.50  E-value=0.21  Score=35.15  Aligned_cols=34  Identities=29%  Similarity=0.313  Sum_probs=24.9

Q ss_pred             CceeeceEeeecccEEEEEEeCCC--CeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWNNT--TPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~~~--~~vavK~l~~   87 (93)
                      .+.+...||+|+||.||.+.-...  ..+|+|.-..
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~   54 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKK   54 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEe
Confidence            455677999999999999986442  3567776543

>KOG1006|consensus

Probab=92.45  E-value=0.035  Score=39.59  Aligned_cols=43  Identities=21%  Similarity=0.379  Sum_probs=34.1

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ..|++...++.-...||.|+||.|++-..+ .+...|||.|...
T Consensus        57 ~~~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~  100 (361)
T KOG1006|consen   57 HLHTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSN  100 (361)
T ss_pred             cccccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeec
Confidence            457777777766678999999999998874 4678899998653

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=92.43  E-value=0.32  Score=33.05  Aligned_cols=34  Identities=24%  Similarity=0.265  Sum_probs=27.2

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+...+.||.|.+|.||++... .+..+++|.+..
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~   36 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITT   36 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEec
Confidence            3455678999999999999974 467889998864

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0660|consensus

Probab=92.42  E-value=0.1  Score=38.02  Aligned_cols=40  Identities=28%  Similarity=0.439  Sum_probs=30.3

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      ..|+++.. +...+.||+|+||.|..+... ++..||||++.
T Consensus        16 ~~~~i~~~-y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~   56 (359)
T KOG0660|consen   16 ELFEIPRY-YVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKIL   56 (359)
T ss_pred             eEEeccce-ecccccccCcceeeEEEEEEcCCCCEeehhhhh
Confidence            45666643 333568999999999999863 46899999985

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=92.18  E-value=0.11  Score=35.22  Aligned_cols=32  Identities=25%  Similarity=0.498  Sum_probs=24.8

Q ss_pred             eeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .+.+.||+|.||.||+|.... +..+++|.+..
T Consensus         8 ~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~   40 (282)
T cd06643           8 EIIGELGDGAFGKVYKAQNKETGVLAAAKVIDT   40 (282)
T ss_pred             HHHhhcccCCCeEEEEEEECCCCeEEEEEEeCC
Confidence            345679999999999999754 55778888754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=92.16  E-value=0.14  Score=35.58  Aligned_cols=32  Identities=13%  Similarity=0.299  Sum_probs=25.1

Q ss_pred             eeceEeee--cccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         57 FVRKLGSG--QFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        57 ~~~~iG~G--~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +.+.||+|  +|+.||++..+ ++..||+|.++..
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~   36 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLE   36 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechh
Confidence            34678999  78899999874 4678999998653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0585|consensus

Probab=92.10  E-value=0.16  Score=38.74  Aligned_cols=36  Identities=31%  Similarity=0.396  Sum_probs=29.2

Q ss_pred             cCCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      .+++.+...||+|+||.|-+|+. ..+..||+|+|..
T Consensus        96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K  132 (576)
T KOG0585|consen   96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPK  132 (576)
T ss_pred             hhheehhhhhcCCccceEEEEeecCCCcEEEEEeech
Confidence            35666778899999999999985 3467999999854

>KOG1152|consensus

Probab=92.09  E-value=0.17  Score=39.53  Aligned_cols=36  Identities=22%  Similarity=0.361  Sum_probs=28.5

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      +++...+.+|+|+||.|+.+.++. ...|+||.|...
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~Ke  597 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKE  597 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhh
Confidence            345667889999999999999864 557889988653

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=92.05  E-value=0.3  Score=32.49  Aligned_cols=32  Identities=28%  Similarity=0.419  Sum_probs=22.6

Q ss_pred             ceeeceEeeecccEEEEEEeCC-CCeEEEEEec
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLK   86 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~   86 (93)
                      +.+.+.||+|+||.||++.... ...+++|.++
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~   34 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLK   34 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEec
Confidence            4566789999999999998743 2334455544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=91.99  E-value=0.22  Score=32.82  Aligned_cols=28  Identities=25%  Similarity=0.388  Sum_probs=23.4

Q ss_pred             EeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         61 LGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        61 iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      ||+|+||.||++.... +..+++|.++..
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~   29 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKA   29 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecch
Confidence            5889999999999864 678999998643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=91.97  E-value=0.24  Score=37.47  Aligned_cols=32  Identities=13%  Similarity=0.278  Sum_probs=23.0

Q ss_pred             ceeEecCCcee---eceEeeecccEEEEEEeCCCC
Q psy12538         47 QWEIDRNSLKF---VRKLGSGQFGEVWEGLWNNTT   78 (93)
Q Consensus        47 ~~ei~~~~~~~---~~~iG~G~fG~V~~g~~~~~~   78 (93)
                      .|+........   .+.||+|+||.||+|.+.+..
T Consensus       324 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~  358 (535)
T PRK09605        324 TWIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGRD  358 (535)
T ss_pred             eeccccccccccCccceeccCCcEEEEEEeecCcc
Confidence            46555443332   578999999999999986643

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=91.85  E-value=0.15  Score=34.10  Aligned_cols=28  Identities=32%  Similarity=0.564  Sum_probs=21.1

Q ss_pred             eEeeecccEEEEEEeCC---CCeEEEEEecC
Q psy12538         60 KLGSGQFGEVWEGLWNN---TTPVAIKTLKM   87 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~~---~~~vavK~l~~   87 (93)
                      .||+|+||.||+|....   ...+++|.+..
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~   32 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRA   32 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCc
Confidence            58999999999997533   34677887653

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=91.76  E-value=0.22  Score=33.60  Aligned_cols=27  Identities=37%  Similarity=0.423  Sum_probs=22.0

Q ss_pred             EeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         61 LGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        61 iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ||+|.||.||++... .+..+++|.+..
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~   28 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDK   28 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEeh
Confidence            689999999999864 366889998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=91.73  E-value=0.24  Score=33.71  Aligned_cols=37  Identities=38%  Similarity=0.547  Sum_probs=27.2

Q ss_pred             cCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~~   88 (93)
                      ..++.+...||+|+||.||++...+      ...+++|.++..
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~   46 (291)
T cd05094           4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP   46 (291)
T ss_pred             hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc
Confidence            3456677899999999999997532      345788887543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=91.55  E-value=0.26  Score=33.34  Aligned_cols=35  Identities=31%  Similarity=0.470  Sum_probs=27.9

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|.||.||++..+ .+..+++|.++..
T Consensus        20 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~   55 (286)
T cd06614          20 LYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLR   55 (286)
T ss_pred             cchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecC
Confidence            4555678999999999999986 4568899988643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=91.47  E-value=0.39  Score=33.24  Aligned_cols=30  Identities=27%  Similarity=0.526  Sum_probs=24.4

Q ss_pred             eceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         58 VRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        58 ~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.||+|+||.||+|... .+..+++|.+..
T Consensus        26 ~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~   56 (313)
T cd06633          26 LHEIGHGSFGAVYFATNSHTNEVVAVKKMSY   56 (313)
T ss_pred             ceeeccCCCeEEEEEEECCCCcEEEEEEEec
Confidence            457999999999999864 456889998853

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=91.40  E-value=0.52  Score=31.17  Aligned_cols=33  Identities=27%  Similarity=0.335  Sum_probs=25.6

Q ss_pred             ceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      +.+.+.||+|.||.+|.+.. .++..+++|.+..
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~   35 (256)
T cd08221           2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNL   35 (256)
T ss_pred             ceEeeEecccCCceEEEEEEcCCCcEEEEEEEee
Confidence            45667899999999998875 3456889998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=91.37  E-value=0.16  Score=34.14  Aligned_cols=28  Identities=32%  Similarity=0.488  Sum_probs=19.7

Q ss_pred             eEeeecccEEEEEEeCCC---CeEEEEEecC
Q psy12538         60 KLGSGQFGEVWEGLWNNT---TPVAIKTLKM   87 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~~~---~~vavK~l~~   87 (93)
                      .||+|+||.||+|...+.   ..+++|.++.
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~   32 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKA   32 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecC
Confidence            589999999999975332   2455666543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=91.22  E-value=0.45  Score=31.82  Aligned_cols=32  Identities=31%  Similarity=0.490  Sum_probs=25.7

Q ss_pred             eeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         57 FVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        57 ~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ..+.||+|.+|.||++... ++..+++|.++..
T Consensus         3 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~   35 (283)
T cd05118           3 KLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLR   35 (283)
T ss_pred             cceeeecCCCceEEEEEcCCCCcEEEEEEeccc
Confidence            3467999999999999874 4678899988653

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=91.06  E-value=0.3  Score=33.55  Aligned_cols=29  Identities=28%  Similarity=0.368  Sum_probs=24.0

Q ss_pred             ceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..||+|+||.||++... .+..+++|.+..
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~   55 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDL   55 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecc
Confidence            57999999999999874 467899998753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=90.98  E-value=0.37  Score=30.02  Aligned_cols=29  Identities=38%  Similarity=0.511  Sum_probs=23.7

Q ss_pred             EeeecccEEEEEEeCC-CCeEEEEEecCCC
Q psy12538         61 LGSGQFGEVWEGLWNN-TTPVAIKTLKMGS   89 (93)
Q Consensus        61 iG~G~fG~V~~g~~~~-~~~vavK~l~~~~   89 (93)
                      ||+|.+|.+|++.... +..+++|.+....
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~   30 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKED   30 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEecccc
Confidence            5899999999999864 6788999987643

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0586|consensus

Probab=90.65  E-value=0.42  Score=37.03  Aligned_cols=37  Identities=24%  Similarity=0.344  Sum_probs=29.9

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCCCc
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMGSI   90 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~~~   90 (93)
                      .+.+...||+|.|+.|..++.. .+..||+|.++..+.
T Consensus        57 ~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l   94 (596)
T KOG0586|consen   57 LYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL   94 (596)
T ss_pred             ceeeeeeeccceeEEEEeeEecCCCceEEEEEehhccc
Confidence            4556678999999999999863 367999999987654

>KOG0581|consensus

Probab=90.20  E-value=0.27  Score=35.95  Aligned_cols=34  Identities=26%  Similarity=0.315  Sum_probs=28.1

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      +++...+.||+|+.|.||+++.+ ++...|.|++.
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~  113 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVIL  113 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeec
Confidence            35666678999999999999985 46788999984

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=90.10  E-value=0.29  Score=33.79  Aligned_cols=33  Identities=33%  Similarity=0.492  Sum_probs=25.9

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +...+.||+|+||.||+|... ++..+++|.+..
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~   50 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSY   50 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEec
Confidence            444567999999999999974 456889998753

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=90.10  E-value=0.39  Score=32.28  Aligned_cols=28  Identities=32%  Similarity=0.520  Sum_probs=21.5

Q ss_pred             eEeeecccEEEEEEeCC-C--CeEEEEEecC
Q psy12538         60 KLGSGQFGEVWEGLWNN-T--TPVAIKTLKM   87 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~~-~--~~vavK~l~~   87 (93)
                      .||+|+||.||+|.... +  ..+++|.++.
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~   32 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE   32 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccc
Confidence            58999999999999754 2  2467887763

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=90.09  E-value=0.47  Score=32.27  Aligned_cols=30  Identities=27%  Similarity=0.348  Sum_probs=24.5

Q ss_pred             eceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         58 VRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        58 ~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.||+|+||.||++... ++..+++|.++.
T Consensus        24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~   54 (285)
T cd06648          24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDL   54 (285)
T ss_pred             ceEeccCCCeEEEEEEECCCCCEEEEEEEec
Confidence            468999999999999864 467899998753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=89.98  E-value=0.13  Score=34.28  Aligned_cols=28  Identities=54%  Similarity=0.799  Sum_probs=21.9

Q ss_pred             eEeeecccEEEEEEeCC-------CCeEEEEEecC
Q psy12538         60 KLGSGQFGEVWEGLWNN-------TTPVAIKTLKM   87 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~~-------~~~vavK~l~~   87 (93)
                      .||+|+||.||+|.+..       +..+++|.+..
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~   36 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRK   36 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhc
Confidence            58999999999998743       24678887754

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG0612|consensus

Probab=89.79  E-value=0.032  Score=46.00  Aligned_cols=39  Identities=23%  Similarity=0.383  Sum_probs=31.6

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .+.+++|.+.+.||+|+||.|...+.+. +..+|.|.+..
T Consensus        71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK  110 (1317)
T KOG0612|consen   71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNK  110 (1317)
T ss_pred             hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhH
Confidence            4566788889999999999999988754 56778888754

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=89.74  E-value=0.46  Score=31.20  Aligned_cols=28  Identities=36%  Similarity=0.413  Sum_probs=22.8

Q ss_pred             EeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         61 LGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        61 iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      ||+|+||.+|++.... +..+++|.+...
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~   29 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKK   29 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehh
Confidence            6899999999999753 678899987643

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG1290|consensus

Probab=89.51  E-value=0.49  Score=36.25  Aligned_cols=36  Identities=36%  Similarity=0.522  Sum_probs=29.7

Q ss_pred             CCceeeceEeeecccEEEEEEe-CCCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~   88 (93)
                      ..+++..+||=|+|.+||.+.. .+.+.||+|+.+..
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA  114 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA  114 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh
Confidence            5667778999999999999874 55789999998753

>KOG0576|consensus

Probab=89.35  E-value=0.16  Score=40.14  Aligned_cols=39  Identities=23%  Similarity=0.513  Sum_probs=29.9

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCCCcc
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMGSID   91 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~~~~   91 (93)
                      .++.+...+|+|.+|.||+++-. .+...|+|.++....+
T Consensus        15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d   54 (829)
T KOG0576|consen   15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD   54 (829)
T ss_pred             cchhheeeecCCcccchhhhcccccCchhhheeeeccCCc
Confidence            34555678999999999999963 4568889998875543

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=89.35  E-value=0.56  Score=32.22  Aligned_cols=29  Identities=28%  Similarity=0.351  Sum_probs=23.9

Q ss_pred             ceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..||+|+||.||++... ++..+++|.++.
T Consensus        27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~   56 (297)
T cd06659          27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDL   56 (297)
T ss_pred             hhcCCCCceeEEEEEEcCCCCEEEEEEEEe
Confidence            46999999999999864 467899999854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=89.06  E-value=0.62  Score=31.92  Aligned_cols=29  Identities=28%  Similarity=0.368  Sum_probs=23.7

Q ss_pred             ceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..||+|+||.||++... .+..+++|.++.
T Consensus        28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~   57 (292)
T cd06658          28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDL   57 (292)
T ss_pred             hcccCCCCeEEEEEEECCCCCEEEEEEEec
Confidence            56999999999999864 456899998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG4717|consensus

Probab=88.74  E-value=0.13  Score=39.86  Aligned_cols=37  Identities=24%  Similarity=0.343  Sum_probs=28.9

Q ss_pred             ceeeceEeeecccEEEEEEe-CCCCeEEEEEecCCCcc
Q psy12538         55 LKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMGSID   91 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~~~~   91 (93)
                      +-+++.||+|+|..|-.++. -.+..||||+++...+|
T Consensus        20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD   57 (864)
T KOG4717|consen   20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLD   57 (864)
T ss_pred             ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccc
Confidence            34567899999998888874 44679999999876554

>KOG0610|consensus

Probab=88.65  E-value=0.17  Score=37.82  Aligned_cols=40  Identities=20%  Similarity=0.403  Sum_probs=31.3

Q ss_pred             EecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecCCC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGS   89 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~~   89 (93)
                      +...++.+.+.||+|..|.||.++.++ .+..|+|++....
T Consensus        74 l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~  114 (459)
T KOG0610|consen   74 LGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKES  114 (459)
T ss_pred             cCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHH
Confidence            444455666789999999999999876 4788999986543

>KOG0668|consensus

Probab=88.56  E-value=0.099  Score=36.74  Aligned_cols=35  Identities=40%  Similarity=0.701  Sum_probs=27.8

Q ss_pred             CCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      .++.+..++|+|.+++||.|.. .+...++||.|++
T Consensus        38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP   73 (338)
T KOG0668|consen   38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP   73 (338)
T ss_pred             chHHHHHHHcCccHhhHhcccccCCCceEEEeeech
Confidence            3555667899999999999984 4556888999875

>KOG0616|consensus

Probab=88.55  E-value=0.39  Score=34.71  Aligned_cols=35  Identities=26%  Similarity=0.352  Sum_probs=27.9

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .++.+...||.|+||.|...+.+ ++..+|.|.|+.
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k   79 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDK   79 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCH
Confidence            45666778999999999998874 356889998854

>KOG0983|consensus

Probab=88.24  E-value=0.34  Score=34.92  Aligned_cols=36  Identities=31%  Similarity=0.572  Sum_probs=28.3

Q ss_pred             cCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .+++++...||+|..|.||+.+++. +...|||....
T Consensus        91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~r  127 (391)
T KOG0983|consen   91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRR  127 (391)
T ss_pred             hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecc
Confidence            3455555679999999999999865 56789998854

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=88.06  E-value=0.7  Score=30.72  Aligned_cols=27  Identities=33%  Similarity=0.387  Sum_probs=22.6

Q ss_pred             EeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         61 LGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        61 iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      ||.|.||.||++.... +..+++|.+..
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~   28 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKK   28 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEeh
Confidence            6899999999999753 67899998854

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG1235|consensus

Probab=87.86  E-value=0.49  Score=36.35  Aligned_cols=30  Identities=20%  Similarity=0.309  Sum_probs=27.4

Q ss_pred             ceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         59 RKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      +.|+..+.|+||+++++++..||||+.+++
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~  196 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHPG  196 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCcC
Confidence            579999999999999999999999998765

>PHA03210 serine/threonine kinase US3; Provisional

Probab=87.78  E-value=0.41  Score=35.88  Aligned_cols=23  Identities=17%  Similarity=0.475  Sum_probs=19.0

Q ss_pred             CCceeeceEeeecccEEEEEEeC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN   75 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~   75 (93)
                      ..+.+.+.||+|+||.||++.++
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~  170 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALR  170 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEe
Confidence            45777789999999999998753

>KOG0690|consensus

Probab=87.46  E-value=0.21  Score=36.74  Aligned_cols=40  Identities=30%  Similarity=0.408  Sum_probs=31.0

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      .+..+++.+.+.||+|.||.|...+-+. +..+|+|+|+..
T Consensus       164 kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKe  204 (516)
T KOG0690|consen  164 KVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKE  204 (516)
T ss_pred             eeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhh
Confidence            3455677778899999999999877543 568899998753

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=87.22  E-value=0.95  Score=30.53  Aligned_cols=27  Identities=26%  Similarity=0.237  Sum_probs=21.7

Q ss_pred             EeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         61 LGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        61 iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ||+|.||.||++..+ .+..+++|.+..
T Consensus        24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~   51 (267)
T PHA03390         24 LIDGKFGKVSVLKHKPTQKLFVQKIIKA   51 (267)
T ss_pred             ecCCCceEEEEEEEcCCCcEEEEEEEeh
Confidence            699999999999864 356788888754

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=87.12  E-value=0.12  Score=34.48  Aligned_cols=27  Identities=33%  Similarity=0.695  Sum_probs=19.8

Q ss_pred             eEeeecccEEEEEEeCC--------CCeEEEEEec
Q psy12538         60 KLGSGQFGEVWEGLWNN--------TTPVAIKTLK   86 (93)
Q Consensus        60 ~iG~G~fG~V~~g~~~~--------~~~vavK~l~   86 (93)
                      .||+|+||.||+|....        ...+++|.+.
T Consensus         2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~   36 (258)
T cd05078           2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLD   36 (258)
T ss_pred             CCCcccchhheeeeecccccccccccchhhHHhhc
Confidence            58999999999998632        1246677664

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=87.04  E-value=0.79  Score=31.89  Aligned_cols=30  Identities=17%  Similarity=0.329  Sum_probs=22.9

Q ss_pred             ceEeee--cccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         59 RKLGSG--QFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        59 ~~iG~G--~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ..||.|  +|+.||.+... .+..||+|.+...
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~   36 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLE   36 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccc
Confidence            346666  89999999864 5679999998643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG2345|consensus

Probab=86.88  E-value=0.49  Score=33.48  Aligned_cols=42  Identities=21%  Similarity=0.167  Sum_probs=32.6

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEE-eCCCCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGL-WNNTTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~-~~~~~~vavK~l~~   87 (93)
                      ..--++.+.+.+...+|+|+|..||.+. ..+...+|+|++.-
T Consensus        14 ~tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c   56 (302)
T KOG2345|consen   14 GTVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILC   56 (302)
T ss_pred             CcEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeec
Confidence            3455777888889999999999999877 34456888888753

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=86.63  E-value=1.6  Score=32.42  Aligned_cols=33  Identities=9%  Similarity=0.104  Sum_probs=25.3

Q ss_pred             ceeeceEeeecccEEEEEEeCC--CCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWNN--TTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~~--~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||++.-..  ...|++|.+..
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~  103 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVML  103 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEccc
Confidence            5667889999999999997532  45788887643

>KOG0611|consensus

Probab=85.81  E-value=0.15  Score=38.43  Aligned_cols=38  Identities=26%  Similarity=0.439  Sum_probs=30.6

Q ss_pred             CCceeeceEeeecccEEEEEEe-CCCCeEEEEEecCCCc
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMGSI   90 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~~~   90 (93)
                      ..+.+.+.||+|.||.|-+++- ..++.||||.|+.+.+
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkI   91 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKI   91 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhc
Confidence            4556678899999999999985 5578999999976544

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=84.68  E-value=6.6  Score=26.69  Aligned_cols=33  Identities=24%  Similarity=0.449  Sum_probs=28.9

Q ss_pred             CCceeeceEeeecc-cEEEEEEeCCCCeEEEEEec
Q psy12538         53 NSLKFVRKLGSGQF-GEVWEGLWNNTTPVAIKTLK   86 (93)
Q Consensus        53 ~~~~~~~~iG~G~f-G~V~~g~~~~~~~vavK~l~   86 (93)
                      .+|.+.+.||.|.- |.||+....+. .+|+|..+
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~g~-~YALKlf~   70 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEIDGR-IYALKLFR   70 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEECCe-EEEEEEee
Confidence            67888999999999 99999998874 89999943

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=84.36  E-value=1.8  Score=25.63  Aligned_cols=29  Identities=14%  Similarity=0.008  Sum_probs=23.8

Q ss_pred             ceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         59 RKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      +.||+|.++.||++...+ ..+++|.....
T Consensus         4 ~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~   32 (155)
T cd05120           4 KLLKGGLTNRVYLLGTKD-EDYVLKINPSR   32 (155)
T ss_pred             eecccccccceEEEEecC-CeEEEEecCCC
Confidence            568999999999999866 57888887543

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0984|consensus

Probab=84.08  E-value=1.1  Score=31.11  Aligned_cols=40  Identities=25%  Similarity=0.411  Sum_probs=30.1

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      ++++-..+.-...||+|++|.|-+-++ .+++..|+|.+..
T Consensus        41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~   81 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRA   81 (282)
T ss_pred             cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehh
Confidence            566655555567899999998887765 4567889998864

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=83.22  E-value=2.4  Score=29.17  Aligned_cols=35  Identities=9%  Similarity=-0.109  Sum_probs=27.8

Q ss_pred             cCCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      ...+...+.+|.|+||.||..... ...+++|.+.+
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~~-~~~~iiKvf~~   64 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDTD-YGKYILKVFAP   64 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEecC-CCcEEEEEech
Confidence            356677789999999999986553 45899999864

>KOG0589|consensus

Probab=82.38  E-value=0.63  Score=34.83  Aligned_cols=36  Identities=17%  Similarity=0.364  Sum_probs=26.5

Q ss_pred             CceeeceEeeecccEEEEEEeCC-CCeEEEEEecCCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGS   89 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~~   89 (93)
                      ++...+.+|+|+||.++..+.+. ...+++|.+....
T Consensus         5 ~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~   41 (426)
T KOG0589|consen    5 NYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEK   41 (426)
T ss_pred             hhhhhhhcCccccchhhhhhhccCCceEEEEEEeccc
Confidence            44556789999999998766532 4588899886544

>KOG0695|consensus

Probab=80.73  E-value=0.53  Score=34.90  Aligned_cols=42  Identities=17%  Similarity=0.239  Sum_probs=34.1

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..|.+...++.+...||+|+|..|..+++. ..+.+|+|+++.
T Consensus       243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkk  285 (593)
T KOG0695|consen  243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKK  285 (593)
T ss_pred             cccccccccceeeeeecCcchhhhhheehcccceeeehhhHHH
Confidence            347777788888899999999999998874 356788888764

>PRK10345 hypothetical protein; Provisional

Probab=80.31  E-value=2.4  Score=28.46  Aligned_cols=28  Identities=18%  Similarity=0.302  Sum_probs=19.8

Q ss_pred             eceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         58 VRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        58 ~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      ...||+|+||.||.  .+.....+||++..
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~   34 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQRCIKIVYH   34 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCeEEEEEec
Confidence            45899999999996  43323346888754

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=80.18  E-value=2  Score=28.99  Aligned_cols=34  Identities=29%  Similarity=0.501  Sum_probs=26.7

Q ss_pred             ceeeceEeeecccEEEEEEeCCCCeEEEEEecCCC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS   89 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~~   89 (93)
                      +.....|+.|.++.||.|.|.+. .+++|.-+.++
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~~~~-~~a~Kvrr~ds   57 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEWRGG-EVALKVRRRDS   57 (201)
T ss_pred             hhhhhhhhcccccEEEEeeccCc-eEEEEEecCCc
Confidence            33456899999999999999875 77888776543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	93
3a4o_X	286	Lyn Kinase Domain Length = 286		7e-13
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		2e-12
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		2e-12
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		3e-12
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		3e-12
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		3e-12
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		8e-12
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-11
2pl0_A	289	Lck Bound To Imatinib Length = 289		3e-11
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		3e-11
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		3e-11
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		3e-11
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		3e-11
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		3e-11
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		3e-11
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		3e-11
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		4e-11
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		4e-11
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		4e-11
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		4e-11
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		4e-11
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		6e-11
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		9e-11
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		9e-11
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		9e-11
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		1e-10
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		1e-10
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		1e-10
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		1e-10
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		1e-10
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		1e-10
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		1e-10
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-10
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		2e-10
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		2e-10
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		4e-10
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		5e-10
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-09
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-09
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		9e-08
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		1e-07
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-07
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		1e-07
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		1e-07
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-07
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		3e-07
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		3e-07
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		3e-07
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		3e-07
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		3e-07
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		3e-07
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		3e-07
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		3e-07
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		4e-07
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		4e-07
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		4e-07
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		4e-07
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-07
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		6e-07
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		6e-07
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		6e-07
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		8e-07
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		8e-07
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		8e-07
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		9e-07
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		1e-06
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		1e-06
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-06
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		2e-06
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		2e-06
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		5e-06
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		5e-06
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		5e-06
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		8e-06
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		8e-06
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		9e-06
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		1e-04
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		1e-04
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		2e-04
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-04
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-04
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		3e-04
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		3e-04
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		4e-04
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		5e-04
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		5e-04
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		5e-04
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		5e-04
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		5e-04
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		5e-04
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		5e-04
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		5e-04
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		5e-04
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		5e-04
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		5e-04
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		5e-04
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		5e-04
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		5e-04
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		5e-04
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		5e-04
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		6e-04
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		9e-04

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/46 (60%), Positives = 38/46 (82%)
Query: 45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          +D WEI R S+K V++LG+GQFGEVW G +NN+T VA+KTLK G++
Sbjct: 5  KDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM 50

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          +D WEI R SL+ +++LG+GQFGEVW G WN  T VAIKTLK G++
Sbjct: 1  KDVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTM 46

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/57 (59%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 34  KPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
           KP T GL+   +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 168 KPQTQGLA---KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 221

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/57 (59%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 34  KPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
           KP T GL+   +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 168 KPQTQGLA---KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 221

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/57 (59%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 34  KPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
           KP T GL+   +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 168 KPQTQGLA---KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 221

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/57 (59%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 34  KPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
           KP T GL+   +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 169 KPQTQGLA---KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNM 222

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 36/43 (83%)
Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          WEI R S+K V+KLG+GQFGEVW G +NN+T VA+KTLK G++
Sbjct: 7  WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM 49

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 34  KPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
           KP T GL+   +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 251 KPQTQGLA---KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 304

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          D+WE+ R +LK V +LG+GQFGEVW G +N  T VA+K+LK GS+
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM 60

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          D+WE+ R +LK V +LG+GQFGEVW G +N  T VA+K+LK GS+
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM 59

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          D+WE+ R +LK V +LG+GQFGEVW G +N  T VA+K+LK GS+
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM 56

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          D+WE+ R +LK V +LG+GQFGEVW G +N  T VA+K+LK GS+
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM 58

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 37 TGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          T GL+   +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 5  TQGLA---KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 55

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 37 TGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          T GL+   +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 5  TQGLA---KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 55

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 37 TGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          T GL+   +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 5  TQGLA---KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 55

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 37 TGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          T GL+   +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 5  TQGLA---KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 55

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 37 TGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          T GL+   +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 5  TQGLA---KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 55

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 37 TGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          T GL+   +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 5  TQGLA---KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 55

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 37 TGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          T GL+   +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 5  TQGLA---KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 55

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 37 TGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          T GL+   +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 2  TQGLA---KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 52

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 37 TGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          T GL+   +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 5  TQGLA---KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 55

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 37 TGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          T GL+   +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 2  TQGLA---KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 52

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 45  RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
           +D WEI R SLK  +KLG+GQFGEVW   +N  T VA+KT+K GS+
Sbjct: 174 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM 219

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          D+WE+ R +LK V +LG+GQFGEVW G +N  T VA+K+LK GS+
Sbjct: 1  DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM 45

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 45  RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
           +D WEI R SLK  +KLG+GQFGEVW   +N  T VA+KT+K GS+
Sbjct: 180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM 225

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          D+WE+ R +LK V +LG+GQFGEVW G +N  T VA+K+LK GS+
Sbjct: 6  DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM 50

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          D+WE+ R +LK V +LG+GQFGEVW G +N  T VA+K+LK GS+
Sbjct: 6  DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM 50

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          D+WE+ R +LK V +LG+GQFGEVW G +N  T VA+K+LK GS+
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM 56

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          D+WE+ R +LK V +LG+GQFGEVW G +N  T VA+K+LK GS+
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM 55

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          D+WE+ R +LK V +LG+GQFGEVW G +N  T VA+K+LK GS+
Sbjct: 7  DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM 51

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          D+WE+ R +LK V +LG+GQFGEVW G +N  T VA+K+LK GS+
Sbjct: 8  DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM 52

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          D+WE+ R +LK V +LG+GQFGEVW G +N  T VA+K+LK GS+
Sbjct: 6  DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM 50

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          +D WEI R SLK  +KLG+GQFGEVW   +N  T VA+KT+K GS+
Sbjct: 7  KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM 52

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 33/46 (71%)
Query: 45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 3  KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 48

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 33/46 (71%)
Query: 45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 1  KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 46

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/45 (64%), Positives = 32/45 (71%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 1  DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 45

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          +WE+ R +LK V +LG+GQFGEVW G +N  T VA+K+LK GS+
Sbjct: 3  EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM 46

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 31/43 (72%)
Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++
Sbjct: 2  WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM 44

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          D WE+ R +LK V +LG+GQ GEVW G +N  T VA+K+LK GS+
Sbjct: 6  DAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSM 50

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 34  KPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
           KP   G+S    D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 241 KPTVYGVS-PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 298

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 34  KPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
           KP   G+S    D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 202 KPTIYGVS-PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 259

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 35 PVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          P T GL + +   WEID   L F+++LG+GQFG V  G W     VAIK +K GS+
Sbjct: 9  PSTAGLGYGS---WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM 61

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 35 PVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          P T GL + +   WEID   L F+++LG+GQFG V  G W     VAIK +K GS+
Sbjct: 9  PSTAGLGYGS---WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM 61

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
          D+WE++R  +    KLG GQFGEV+EG+W   +  VA+KTLK  +++
Sbjct: 4  DKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME 50

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
          D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 19 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 65

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 41 SHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
          S    D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 6  SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
          D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 8  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 54

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
          D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 8  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 54

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
          D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 8  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 54

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 41 SHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
          S    D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 6  SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
          D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 6  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 52

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
          D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 7  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 53

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
          D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 7  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 53

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
          D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 6  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 52

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
          D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 6  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 52

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
          D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 6  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 52

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
          D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 4  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 50

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 41 SHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTT-PVAIKTLKMGSID 91
          S    D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 6  SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 41 SHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTT-PVAIKTLKMGSID 91
          S    D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 6  SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 41 SHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTT-PVAIKTLKMGSID 91
          S    D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 6  SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTT-PVAIKTLKMGSID 91
          D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 4  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 50

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTT-PVAIKTLKMGSID 91
          D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 6  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 52

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTT-PVAIKTLKMGSID 91
          D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 10 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 56

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTT-PVAIKTLKMGSID 91
          D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 6  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 52

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 37 TGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
          T  L   + D+WE++R  +    KLG GQ+GEV+ G+W   +  VA+KTLK  +++
Sbjct: 16 TENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME 71

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Query: 47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI---DFV 93
          +W ID + L FV+++GSGQFG V  G W N   VAIKT++ G++   DF+
Sbjct: 4  KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFI 53

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Query: 47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI---DFV 93
          +W ID + L FV+++GSGQFG V  G W N   VAIKT++ G++   DF+
Sbjct: 2  KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFI 51

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 37 TGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          T GL + +   WEID   L F+++LG+GQFG V  G W     VAIK +K GS+
Sbjct: 2  TAGLGYGS---WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM 52

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 50 IDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI---DFV 93
          ID + L FV+++GSGQFG V  G W N   VAIKT+K GS+   DF+
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFI 70

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          WEID   L F+++LG+GQFG V  G W     VAIK +K GS+
Sbjct: 4  WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM 46

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          WEID   L F+++LG+GQFG V  G W     VAIK +K GS+
Sbjct: 3  WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM 45

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          WEID   L F+++LG+GQFG V  G W     VAIK +K GS+
Sbjct: 4  WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM 46

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 50 IDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI---DFV 93
          ID + L FV+++GSGQFG V  G W N   VAIKT++ G++   DF+
Sbjct: 4  IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFI 50

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 50 IDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI---DFV 93
          ID + L FV+++GSGQFG V  G W N   VAIKT++ G++   DF+
Sbjct: 2  IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFI 48

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 50 IDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI---DFV 93
          ID + L FV+++GSGQFG V  G W N   VAIKT++ G++   DF+
Sbjct: 4  IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFI 50

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 38 GGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKMGSIDFV 93
          G +  STRD +EI R  ++  R +G GQFG+V +G++    N    VAIKT K  + D V
Sbjct: 24 GAMGSSTRD-YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV 82

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 38 GGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKMGSIDFV 93
          G +  STRD +EI R  ++  R +G GQFG+V +G++    N    VAIKT K  + D V
Sbjct: 1  GAMGSSTRD-YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV 59

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 50 IDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          ID   L F+++LG+GQFG V  G W     VAIK +K GS+
Sbjct: 1  IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM 41

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 43 STRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKMGSIDFV 93
          STRD +EI R  ++  R +G GQFG+V +G++    N    VAIKT K  + D V
Sbjct: 1  STRD-YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV 54

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 43 STRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKMGSIDFV 93
          STRD +EI R  ++  R +G GQFG+V +G++    N    VAIKT K  + D V
Sbjct: 1  STRD-YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV 54

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 43 STRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKMGSIDFV 93
          STRD +EI R  ++  R +G GQFG+V +G++    N    VAIKT K  + D V
Sbjct: 1  STRD-YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV 54

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 43 STRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKMGSIDFV 93
          STRD +EI R  ++  R +G GQFG+V +G++    N    VAIKT K  + D V
Sbjct: 1  STRD-YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV 54

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 41 SHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKMGSIDFV 93
          S STRD +EI R  ++  R +G GQFG+V +G++    N    VAIKT K  + D V
Sbjct: 2  SGSTRD-YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV 57

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 43  STRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKMGSIDFV 93
           STRD +EI R  ++  R +G GQFG+V +G++    N    VAIKT K  + D V
Sbjct: 381 STRD-YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV 434

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 43  STRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKMGSIDFV 93
           STRD +EI R  ++  R +G GQFG+V +G++    N    VAIKT K  + D V
Sbjct: 381 STRD-YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV 434

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 38 GGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWE----GLWNNTTP--VAIKTL 85
           G + S  D  E+ R ++  +R LG G FGEV+E    G+ N+ +P  VA+KTL
Sbjct: 16 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 69

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 38 GGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWE----GLWNNTTP--VAIKTL 85
           G + S  D  E+ R ++  +R LG G FGEV+E    G+ N+ +P  VA+KTL
Sbjct: 16 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 69

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 38 GGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWE----GLWNNTTP--VAIKTL 85
           G + S  D  E+ R ++  +R LG G FGEV+E    G+ N+ +P  VA+KTL
Sbjct: 16 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 69

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 38 GGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWE----GLWNNTTP--VAIKTL 85
           G + S  D  E+ R ++  +R LG G FGEV+E    G+ N+ +P  VA+KTL
Sbjct: 42 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 95

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 38 GGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWE----GLWNNTTP--VAIKTL 85
           G + S  D  E+ R ++  +R LG G FGEV+E    G+ N+ +P  VA+KTL
Sbjct: 30 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 83

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 38 GGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWE----GLWNNTTP--VAIKTL 85
           G + S  D  E+ R ++  +R LG G FGEV+E    G+ N+ +P  VA+KTL
Sbjct: 30 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 83

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 38 GGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWE----GLWNNTTP--VAIKTL 85
           G + S  D  E+ R ++  +R LG G FGEV+E    G+ N+ +P  VA+KTL
Sbjct: 22 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 75

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 38 GGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWE----GLWNNTTP--VAIKTL 85
           G + S  D  E+ R ++  +R LG G FGEV+E    G+ N+ +P  VA+KTL
Sbjct: 32 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 85

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 38 GGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWE----GLWNNTTP--VAIKTL 85
           G + S  D  E+ R ++  +R LG G FGEV+E    G+ N+ +P  VA+KTL
Sbjct: 30 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 83

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 38 GGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWE----GLWNNTTP--VAIKTL 85
           G + S  D  E+ R ++  +R LG G FGEV+E    G+ N+ +P  VA+KTL
Sbjct: 15 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 68

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 38 GGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWE----GLWNNTTP--VAIKTL 85
           G + S  D  E+ R ++  +R LG G FGEV+E    G+ N+ +P  VA+KTL
Sbjct: 15 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 68

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 38 GGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWE----GLWNNTTP--VAIKTL 85
           G + S  D  E+ R ++  +R LG G FGEV+E    G+ N+ +P  VA+KTL
Sbjct: 33 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 86

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 38  GGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWE----GLWNNTTP--VAIKTL 85
            G + S  D  E+ R ++  +R LG G FGEV+E    G+ N+ +P  VA+KTL
Sbjct: 56  AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 109

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 38 GGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWE----GLWNNTTP--VAIKTL 85
           G + S  D  E+ R ++  +R LG G FGEV+E    G+ N+ +P  VA+KTL
Sbjct: 7  AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 60

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 38.9 bits (89), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 43 STRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKMGSIDFV 93
          STRD +EI R  ++  R +G GQFG+V +G++    N    VAIKT K  + D V
Sbjct: 3  STRD-YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV 56

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 49 EIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          E+ R  +  +++LGSGQFG V  G W     VA+K +K GS+
Sbjct: 4  ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM 45

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	93
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-26
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-24
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-23
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	4e-23
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	5e-23
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-22
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-22
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-22
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-22
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	4e-22
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	5e-22
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	5e-22
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-21
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-21
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-21
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-21
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	6e-21
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	8e-21
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	9e-21
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-20
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-20
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-20
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	4e-20
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	4e-20
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	7e-20
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-19
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-19
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-19
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-19
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-19
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-19
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	4e-19
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	5e-19
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	6e-19
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	6e-19
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	6e-19
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	9e-19
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-18
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-18
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-18
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-18
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-18
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-18
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-18
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	3e-18
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-18
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	6e-18
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-17
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-16
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-15
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-15
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-15
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-15
3pls_A	298	Macrophage-stimulating protein receptor; protein k	4e-15
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	6e-15
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-14
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	5e-14
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	5e-14
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	7e-14
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-13
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-13
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	6e-11
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	9e-11
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-10
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-09
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-09
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-07
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-07
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	9e-06
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-04
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-04
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-04
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-04
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	4e-04
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	6e-04
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	7e-04

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 97.3 bits (243), Expect = 2e-26
 Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 3/59 (5%)

Query: 33 EKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
            P T GL +     WEID   L F+++LG+GQFG V  G W     VAIK +K GS+ 
Sbjct: 7  NAPSTAGLGY---GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS 62

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 92.7 bits (231), Expect = 1e-24
 Identities = 26/47 (55%), Positives = 35/47 (74%)

Query: 45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
           D+WE+ R +LK V +LG+GQFGEVW G +N  T VA+K+LK GS+ 
Sbjct: 5  EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS 51

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 89.6 bits (223), Expect = 2e-23
 Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 10/65 (15%)

Query: 39 GLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT------TPVAIKTLKMGS--- 89
          G  HS      I R  +   R+LG G FG+V+     N         VA+K LK  +   
Sbjct: 1  GAMHSGIHVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAA 60

Query: 90 -IDFV 93
            DF 
Sbjct: 61 RKDFQ 65

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 88.4 bits (220), Expect = 4e-23
 Identities = 22/45 (48%), Positives = 31/45 (68%)

Query: 47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
          +W ID + L FV+++GSGQFG V  G W N   VAIKT++ G++ 
Sbjct: 2  KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS 46

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 88.0 bits (219), Expect = 5e-23
 Identities = 18/45 (40%), Positives = 26/45 (57%)

Query: 47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
            E+ R  +  +++LGSGQFG V  G W     VA+K +K GS+ 
Sbjct: 2  HMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS 46

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 88.6 bits (220), Expect = 1e-22
 Identities = 29/63 (46%), Positives = 39/63 (61%)

Query: 29  RLAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG 88
           +L+V    +       +D WEI R SLK  +KLG+GQFGEVW   +N  T VA+KT+K G
Sbjct: 164 KLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG 223

Query: 89  SID 91
           S+ 
Sbjct: 224 SMS 226

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 88.7 bits (220), Expect = 1e-22
 Identities = 34/59 (57%), Positives = 38/59 (64%), Gaps = 3/59 (5%)

Query: 33  EKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
            KP T GL+    D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++ 
Sbjct: 167 SKPQTQGLAK---DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS 222

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 87.0 bits (216), Expect = 2e-22
 Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 5/60 (8%)

Query: 37 TGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW-----NNTTPVAIKTLKMGSID 91
               ++ +D    +   LK++ +LG G FG V    +     N    VA+K L+    D
Sbjct: 7  HHAQLYACQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPD 66

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 86.1 bits (214), Expect = 3e-22
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 39 GLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKMGSID 91
          G   S+   +EI R  ++  R +G GQFG+V +G++    N    VAIKT K  + D
Sbjct: 1  GAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD 57

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 87.6 bits (217), Expect = 4e-22
 Identities = 29/47 (61%), Positives = 33/47 (70%)

Query: 45  RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
           +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++ 
Sbjct: 259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS 305

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 85.8 bits (213), Expect = 5e-22
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
          D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 6  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 52

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 85.3 bits (212), Expect = 5e-22
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKMGSID 91
            Q+ I R  +   R LG G FGEV+EG++ N       VA+KT K     
Sbjct: 4  GPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTL 54

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 85.1 bits (211), Expect = 2e-21
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 9/64 (14%)

Query: 33 EKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTT-----PVAIKTLKM 87
            P    L    +   EI  + +   + +G+G+FGEV++G+   ++     PVAIKTLK 
Sbjct: 28 SDPNQAVL----KFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKA 83

Query: 88 GSID 91
          G  +
Sbjct: 84 GYTE 87

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 85.5 bits (212), Expect = 2e-21
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 32  VEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS 89
           V +          R  W ++   LK ++ +G G+FG+V  G +     VA+K +K  +
Sbjct: 172 VMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRG-NKVAVKCIKNDA 228

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 83.9 bits (208), Expect = 3e-21
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 8/63 (12%)

Query: 33 EKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKMG 88
          E+P   G S       EI+ + +   + +GSG  GEV  G          PVAIK LK G
Sbjct: 33 EEPGRAGRS----FTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG 88

Query: 89 SID 91
            +
Sbjct: 89 YTE 91

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 83.4 bits (207), Expect = 3e-21
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 44 TRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS 89
           R  W ++   LK ++ +G G+FG+V  G +     VA+K +K  +
Sbjct: 12 YRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNK-VAVKCIKNDA 56

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 83.2 bits (206), Expect = 6e-21
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 5/58 (8%)

Query: 37 TGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW-----NNTTPVAIKTLKMGS 89
            G +   RD  + +   LKF+++LG G FG V    +     N    VA+K L+  +
Sbjct: 25 AMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST 82

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 84.1 bits (208), Expect = 8e-21
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 33  EKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGSID 91
               T        D+WE++R  +    KLG GQ+GEV+EG+W   +  VA+KTLK  +++
Sbjct: 200 RNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 259

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 83.1 bits (206), Expect = 9e-21
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 45  RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMGSID 91
           +D+W ++   L    ++G G FGEV+ G    + T VA+K+ +     
Sbjct: 106 KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPP 153

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 82.4 bits (204), Expect = 1e-20
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 11/66 (16%)

Query: 39 GLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMGS--- 89
          G + S  D  E+ R ++  +R LG G FGEV+EG  +          VA+KTL       
Sbjct: 16 GKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 75

Query: 90 --IDFV 93
            +DF+
Sbjct: 76 DELDFL 81

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 83.4 bits (206), Expect = 1e-20
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 35  PVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKMGSI 90
                 +  +   +EI R  ++  R +G GQFG+V +G++    N    VAIKT K  + 
Sbjct: 372 DEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS 431

Query: 91  D 91
           D
Sbjct: 432 D 432

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 81.5 bits (202), Expect = 2e-20
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 4/59 (6%)

Query: 37 TGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWN----NTTPVAIKTLKMGSID 91
          + G          I    L+ + KLG G FG V  G W+     T  VA+K LK   + 
Sbjct: 2  SAGEGPLQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS 60

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 80.8 bits (200), Expect = 4e-20
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 42 HSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW-----NNTTPVAIKTLKMGSID 91
           +  D    ++  LK +R LG G FG+V    +     N    VA+K+LK  S  
Sbjct: 10 ATEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG 64

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 81.3 bits (201), Expect = 4e-20
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWN----NTTPVAIKTLKMGSID 91
              E+D  ++   + +G+G+FGEV  G           VAIKTLK+G  +
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 80.9 bits (200), Expect = 7e-20
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 11/69 (15%)

Query: 36  VTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMGS 89
              G + S  D  E+ R ++  +R LG G FGEV+EG  +          VA+KTL    
Sbjct: 54  CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 113

Query: 90  -----IDFV 93
                +DF+
Sbjct: 114 SEQDELDFL 122

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 79.6 bits (197), Expect = 1e-19
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 5/49 (10%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLW-----NNTTPVAIKTLKMGS 89
          D  + +   LKF+++LG G FG V    +     N    VA+K L+  +
Sbjct: 3  DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST 51

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 79.3 bits (196), Expect = 1e-19
 Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 8/52 (15%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNT--------TPVAIKTLKMGSID 91
           +I    L F   LG G F ++++G+            T V +K L     +
Sbjct: 3  HKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRN 54

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 78.9 bits (195), Expect = 2e-19
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 5/55 (9%)

Query: 40 LSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT-----TPVAIKTLKMGS 89
          L     D     +  LK +R LG G FG+V    ++ T       VA+K LK  +
Sbjct: 18 LFQGPGDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA 72

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 78.9 bits (195), Expect = 3e-19
 Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 16/77 (20%)

Query: 33 EKPVTGGLSH---STRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW--------NNTTPVA 81
          + P+  G+S        +WE  R+ L   + LG G FG+V                  VA
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71

Query: 82 IKTLKMGS-----IDFV 93
          +K LK  +      D V
Sbjct: 72 VKMLKDDATEKDLSDLV 88

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 78.5 bits (194), Expect = 3e-19
 Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 10/62 (16%)

Query: 42 HSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMGS----ID 91
           S      I R  +    +LG G FG+V+    +N         VA+K LK  S     D
Sbjct: 30 FSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD 89

Query: 92 FV 93
          F 
Sbjct: 90 FQ 91

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 78.1 bits (193), Expect = 3e-19
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 45 RDQWEIDRNSLKFV-RKLGSGQFGEVWEGLWNN---TTPVAIKTLKMGSID 91
            +  +DR  L    ++LGSG FG V +G +        VA+K LK  + D
Sbjct: 8  PKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND 58

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 77.7 bits (192), Expect = 4e-19
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 46 DQWEIDRNSLKFVR-KLGSGQFGEVWEGLWN---NTTPVAIKTLKMGSID 91
           +  + R++L     +LG G FG V +G++        VAIK LK G+  
Sbjct: 2  KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK 51

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 77.7 bits (192), Expect = 5e-19
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 11/60 (18%)

Query: 45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMGS-----IDFV 93
            +WE  R+ LK  + LG G FG+V E              VA+K LK G+        +
Sbjct: 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM 78

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 77.7 bits (192), Expect = 6e-19
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 11/59 (18%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMGS-----IDFV 93
           +WE  RN L F + LG+G FG+V E              VA+K LK  +        +
Sbjct: 16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALM 74

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 78.2 bits (193), Expect = 6e-19
 Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 16/95 (16%)

Query: 15  LVWFPVQDCLGSSARLAVEKPVTGGLSH---STRDQWEIDRNSLKFVRKLGSGQFGEVWE 71
                  D    +      + +  G+S        +WE+ R+ L   + LG G FG+V  
Sbjct: 28  YHHHHHHDYDIPTTENLYFQGMLAGVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVL 87

Query: 72  GLW--------NNTTPVAIKTLKMGS-----IDFV 93
                      N  T VA+K LK  +      D +
Sbjct: 88  AEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 122

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 77.7 bits (192), Expect = 6e-19
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)

Query: 35 PVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKMGS 89
          P       +  +   IDRN L   + LG G+FG V EG        +  VA+KT+K+ +
Sbjct: 16 PRGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN 74

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 77.3 bits (191), Expect = 9e-19
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 11/59 (18%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGL------WNNTTPVAIKTLKMGS-----IDFV 93
          ++WE  RN+L+F + LG+G FG+V E         +    VA+K LK  +        +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 76.9 bits (190), Expect = 1e-18
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 11/59 (18%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT------TPVAIKTLKMGS-----IDFV 93
          D+WE+ R  +   R+LG G FG V+EG+          T VAIKT+   +     I+F+
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL 76

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 77.0 bits (190), Expect = 1e-18
 Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 7/62 (11%)

Query: 37 TGGLSHSTR---DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKMGS 89
          + G+S   +   +   I        R LG G+FG V E            VA+K LK   
Sbjct: 4  SLGISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADI 63

Query: 90 ID 91
          I 
Sbjct: 64 IA 65

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 77.0 bits (190), Expect = 1e-18
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 5/47 (10%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLW-----NNTTPVAIKTLKMGS 89
                 L+ ++ LGSG FG V +G+W     +   PV IK ++  S
Sbjct: 8  RIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS 54

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 76.9 bits (190), Expect = 1e-18
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 11/59 (18%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLW------NNTTPVAIKTLKMGS-----IDFV 93
           +WE  R +L   + LG G+FG+V +            T VA+K LK  +      D +
Sbjct: 16 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL 74

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 76.9 bits (190), Expect = 2e-18
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 8/56 (14%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN---TTPVAIKTLKMGS-----IDFV 93
              +D N +KF   +G G FG+V +            AIK +K  +      DF 
Sbjct: 18 IYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA 73

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 75.8 bits (187), Expect = 2e-18
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 41 SHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
          S    D WEI    +   +++GSG FG V++G W+    VA+K L + +  
Sbjct: 12 SRDAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPT 60

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 76.6 bits (189), Expect = 2e-18
 Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 16/86 (18%)

Query: 24  LGSSARLAVEKPVTGGLSHS---TRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW------ 74
           + +      + P+  G+S        +WE  R+ L   + LG G FG+V           
Sbjct: 49  ITTRLSSTADTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKD 108

Query: 75  --NNTTPVAIKTLKMGS-----IDFV 93
                  VA+K LK  +      D V
Sbjct: 109 KPKEAVTVAVKMLKDDATEKDLSDLV 134

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 76.2 bits (188), Expect = 3e-18
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 11/59 (18%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMGS-----IDFV 93
           +WE  R +L+F + LGSG FG+V             +  VA+K LK  +        +
Sbjct: 38 LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALM 96

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 75.7 bits (187), Expect = 3e-18
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 11/57 (19%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMGS-----IDFV 93
           EI  ++++F+ +LG  +FG+V++G          T  VAIKTLK  +      +F 
Sbjct: 4  KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 73.9 bits (182), Expect = 2e-17
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 11/59 (18%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMGS-----IDFV 93
             E  RN++++VR +G G FG V++            T VA+K LK  +      DF 
Sbjct: 40 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQ 98

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 71.5 bits (176), Expect = 1e-16
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 50 IDRNSLKFVRKLGSGQFGEVWEGLW-----NNTTPVAIKTLKMGSID 91
          +     K ++ LGSG FG V++GLW         PVAIK L+  +  
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP 58

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 68.9 bits (169), Expect = 1e-15
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 50 IDRNSLKFVRKLGSGQFGEVWEGLW-----NNTTPVAIKTLKMGSID 91
          +     K ++ LGSG FG V++GLW         PVAIK L+  +  
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP 58

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 68.2 bits (167), Expect = 2e-15
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 31 AVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          A   P     +     +W+I    L+    +G G+FG+V+ G W+    VAI+ + +   
Sbjct: 11 ARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE--VAIRLIDIERD 68

Query: 91 D 91
          +
Sbjct: 69 N 69

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 67.7 bits (166), Expect = 2e-15
 Identities = 9/44 (20%), Positives = 15/44 (34%), Gaps = 1/44 (2%)

Query: 44 TRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTT-PVAIKTLK 86
          +        + L     LG G FG+  +     T   + +K L 
Sbjct: 1  SMPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELI 44

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 68.4 bits (167), Expect = 3e-15
 Identities = 21/86 (24%), Positives = 30/86 (34%), Gaps = 11/86 (12%)

Query: 17  WFPVQDCLGSSARLAVEKPVTGGLSHSTRDQWEIDRNSLKFVR--------KLGSGQFGE 68
           + P    + S  +       T        D  E+    L   R        +LG G FG 
Sbjct: 292 YTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGS 351

Query: 69  VWEGLW---NNTTPVAIKTLKMGSID 91
           V +G++        VAIK LK G+  
Sbjct: 352 VRQGVYRMRKKQIDVAIKVLKQGTEK 377

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 67.3 bits (165), Expect = 4e-15
 Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 7/58 (12%)

Query: 40 LSHSTRDQWEI--DRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKMGSID 91
          L    +D   I  +R      R +G G FG V+ G +     N    AIK+L   +  
Sbjct: 7  LLAEVKD-VLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEM 63

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 66.5 bits (163), Expect = 6e-15
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
           EID   L     +G G FG+V+   W     VA+K  +    +
Sbjct: 2  LEIDFAELTLEEIIGIGGFGKVYRAFWIG-DEVAVKAARHDPDE 44

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 66.5 bits (162), Expect = 1e-14
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 6/50 (12%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMGS 89
           +WE  R+ LK  + LG G FG+V E              VA+K LK G+
Sbjct: 15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 64

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 64.8 bits (158), Expect = 5e-14
 Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 9/55 (16%)

Query: 48  WEIDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKMGS-----IDFV 93
                  + F   +G G FG V+ G            A+K+L   +       F+
Sbjct: 84  IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFL 138

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 64.2 bits (157), Expect = 5e-14
 Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 5/55 (9%)

Query: 40 LSHSTRDQW-EIDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKMGS 89
          L  + +          + F   +G G FG V+ G            A+K+L   +
Sbjct: 11 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 65

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 63.4 bits (155), Expect = 7e-14
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
              ID   L F+ KL     GE+W+G W     + +K LK+    
Sbjct: 3  KHSGIDFKQLNFLTKLNENHSGELWKGRWQG-NDIVVKVLKVRDWS 47

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 62.3 bits (152), Expect = 3e-13
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
          D  +I    L    K+G+G FG V    W+  + VA+K L      
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWHG-SDVAVKILMEQDFH 74

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 61.9 bits (151), Expect = 3e-13
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 36 VTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMGSID 91
            GG          +  N +++ +++G G FG V +G    + + VAIK+L +G  +
Sbjct: 2  AMGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSE 58

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 55.6 bits (134), Expect = 6e-11
 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS 89
           +  +D ++LK +  +G G++G V++G  +   PVA+K     +
Sbjct: 6  SEPSLDLDNLKLLELIGRGRYGAVYKGSLDE-RPVAVKVFSFAN 48

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 55.4 bits (134), Expect = 9e-11
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLK 86
            ID   ++    +G G FG V +  W     VAIK ++
Sbjct: 3  HMIDYKEIEVEEVVGRGAFGVVCKAKWRA-KDVAIKQIE 40

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 53.6 bits (129), Expect = 4e-10
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLK 86
                 ++ V+++G G++GEVW G W     VA+K   
Sbjct: 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWRG-EKVAVKVFF 69

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 51.3 bits (123), Expect = 3e-09
 Identities = 10/49 (20%), Positives = 17/49 (34%), Gaps = 1/49 (2%)

Query: 41 SHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS 89
               +        L+ +     G+FG VW+    N   VA+K   +  
Sbjct: 12 VDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEY-VAVKIFPIQD 59

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 50.5 bits (121), Expect = 4e-09
 Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 37 TGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLK 86
          +G  S            ++     +G G+FGEVW G W     VA+K   
Sbjct: 26 SGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEE-VAVKIFS 74

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 45.0 bits (107), Expect = 3e-07
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 55 LKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLK 86
          +  +  +G G++GEVW G W     VA+K   
Sbjct: 10 ITLLECVGKGRYGEVWRGSWQGEN-VAVKIFS 40

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 41.0 bits (95), Expect = 9e-06
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 52 RNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
             L+   K+G G FGEV++ + ++ TPVAIK + +   D
Sbjct: 19 TEKLQRCEKIGEGVFGEVFQTIADH-TPVAIKIIAIEGPD 57

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 37 TGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKM 87
          +G L  S    W+     LK + ++G G +G V + +   +   +A+K ++ 
Sbjct: 6  SGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRS 57

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 14/66 (21%), Positives = 30/66 (45%), Gaps = 8/66 (12%)

Query: 26 SSARLAVEKPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGL-WNNTTPVAIKT 84
             +   +K +   + ++T   + I        +K+G GQF EV+      +  PVA+K 
Sbjct: 12 PVPQFQPQKALRPDMGYNTLANFRI-------EKKIGRGQFSEVYRAACLLDGVPVALKK 64

Query: 85 LKMGSI 90
          +++  +
Sbjct: 65 VQIFDL 70

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 36.7 bits (85), Expect = 3e-04
 Identities = 11/51 (21%), Positives = 22/51 (43%)

Query: 41 SHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
          S S  +   +       ++++GSG   +V++ L       AIK + +   D
Sbjct: 44 SSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD 94

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 36.6 bits (85), Expect = 4e-04
 Identities = 9/36 (25%), Positives = 18/36 (50%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
            ++++GSG   +V++ L       AIK + +   D
Sbjct: 12 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD 47

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 36.4 bits (85), Expect = 4e-04
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 59 RKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS 89
            +G G FG+V++G+  +   VA+K     S
Sbjct: 45 FLIGHGVFGKVYKGVLRDGAKVALKRRTPES 75

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 35.8 bits (83), Expect = 6e-04
 Identities = 9/36 (25%), Positives = 18/36 (50%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
            ++++GSG   +V++ L       AIK + +   D
Sbjct: 31 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD 66

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 36.0 bits (83), Expect = 7e-04
 Identities = 12/53 (22%), Positives = 16/53 (30%), Gaps = 8/53 (15%)

Query: 39 GLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSI 90
          G   ++   W +          LG G    V+ G    T    AIK     S 
Sbjct: 2  GSQSTSNHLWLLSD-------ILGQGATANVFRGRHKKTGDLFAIKVFNNISF 47

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	93
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.57
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	98.44
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	98.41
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	98.4
4aoj_A	329	High affinity nerve growth factor receptor; transf	98.31
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	98.31
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	98.3
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	98.26
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	98.18
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.09
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	98.07
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	98.01
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	97.96
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	97.94
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	97.89
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	97.89
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	97.87
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	97.76
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	97.75
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	97.73
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	97.68
3soc_A	322	Activin receptor type-2A; structural genomics cons	97.67
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	97.65
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	97.63
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	97.61
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	97.59
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	97.58
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	97.58
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	97.58
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	97.58
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	97.56
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	97.55
3aln_A	327	Dual specificity mitogen-activated protein kinase;	97.54
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	97.53
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	97.52
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	97.51
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	97.51
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	97.49
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	97.49
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	97.49
3fme_A	290	Dual specificity mitogen-activated protein kinase;	97.46
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	97.43
3an0_A	340	Dual specificity mitogen-activated protein kinase;	97.42
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	97.42
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	97.41
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	97.4
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	97.4
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	97.39
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	97.39
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	97.39
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	97.38
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	97.37
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	97.35
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	97.35
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	97.33
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	97.32
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	97.32
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	97.32
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	97.31
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	97.28
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	97.26
3niz_A	311	Rhodanese family protein; structural genomics, str	97.26
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	97.25
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	97.25
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	97.24
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	97.23
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	97.23
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	97.23
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	97.22
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	97.21
3q4u_A	301	Activin receptor type-1; structural genomics conso	97.18
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	97.18
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	97.18
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	97.18
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	97.16
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.15
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	97.15
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	97.15
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	97.14
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	97.14
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	97.14
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	97.13
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	97.13
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	97.13
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	97.12
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	97.11
3uqc_A	286	Probable conserved transmembrane protein; structur	97.11
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	97.11
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	97.11
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	97.1
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	97.09
3o0g_A	292	Cell division protein kinase 5; kinase activator c	97.09
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	97.09
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	97.07
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	97.07
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	97.06
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	97.06
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	97.05
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	97.03
2dyl_A	318	Dual specificity mitogen-activated protein kinase	97.03
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	97.01
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	97.01
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	97.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	96.99
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	96.99
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	96.99
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	96.99
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	96.98
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	96.98
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	96.97
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	96.97
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	96.95
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	96.94
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	96.94
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	96.93
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	96.93
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	96.93
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	96.92
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	96.92
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	96.92
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	96.91
3ork_A	311	Serine/threonine protein kinase; structural genomi	96.91
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	96.9
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	96.9
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	96.87
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	96.87
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	96.87
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	96.86
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	96.86
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	96.86
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	96.86
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	96.84
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	96.84
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	96.84
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	96.83
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	96.82
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	96.82
3rp9_A	458	Mitogen-activated protein kinase; structural genom	96.8
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	96.8
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	96.8
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	96.79
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	96.79
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	96.79
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	96.79
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	96.78
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	96.78
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	96.76
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	96.76
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	96.75
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	96.74
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	96.74
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	96.73
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	96.73
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	96.73
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	96.73
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	96.72
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	96.71
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	96.71
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	96.71
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	96.71
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	96.7
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	96.7
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	96.68
3pls_A	298	Macrophage-stimulating protein receptor; protein k	96.67
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	96.67
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	96.66
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	96.65
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	96.65
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	96.65
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	96.64
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	96.64
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	96.64
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	96.63
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	96.63
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	96.62
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	96.62
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	96.62
3bhy_A	283	Death-associated protein kinase 3; death associate	96.61
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	96.61
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	96.6
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	96.6
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	96.6
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	96.6
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	96.59
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	96.58
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	96.57
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	96.57
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	96.57
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	96.57
2a19_B	284	Interferon-induced, double-stranded RNA-activated	96.56
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	96.55
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	96.54
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	96.54
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	96.52
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	96.51
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	96.51
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	96.51
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	96.51
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	96.5
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	96.5
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	96.5
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	96.5
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	96.49
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	96.49
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	96.49
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	96.48
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	96.48
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	96.47
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	96.46
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	96.46
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	96.44
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	96.44
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	96.43
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	96.42
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	96.4
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	96.39
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	96.39
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	96.39
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	96.38
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	96.38
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	96.38
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	96.37
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	96.37
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	96.37
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	96.36
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	96.36
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	96.34
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	96.34
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	96.33
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	96.28
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	96.27
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	96.27
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	96.26
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	96.24
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	96.22
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	96.22
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	96.21
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	96.21
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	96.13
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	96.12
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	96.12
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	96.11
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	96.1
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	96.1
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	96.09
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	96.05
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	96.01
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	96.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	95.99
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	95.92
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	95.81
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	95.71
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	92.42
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	92.23

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=98.57  E-value=5.1e-08  Score=67.74  Aligned_cols=41  Identities=39%  Similarity=0.826  Sum_probs=37.0

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ..||++.+++.+.+.||+|+||.||+|.+++  .||||.++..
T Consensus        29 ~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~   69 (307)
T 3omv_A           29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVV   69 (307)
T ss_dssp             CCCBCCTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCS
T ss_pred             cCcEEcHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEec
Confidence            5699999999999999999999999999876  6899998753

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=98.44  E-value=1.8e-07  Score=66.08  Aligned_cols=44  Identities=41%  Similarity=0.653  Sum_probs=37.7

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecCCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMGS   89 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~~~   89 (93)
                      ..||++++++.+.+.||+|+||.||+|.+.+      ...||||.++...
T Consensus        57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~  106 (353)
T 4ase_A           57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA  106 (353)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC
T ss_pred             cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc
Confidence            4699999999999999999999999999743      2479999997643

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=98.41  E-value=3.3e-07  Score=63.52  Aligned_cols=42  Identities=40%  Similarity=0.605  Sum_probs=35.2

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecCC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMG   88 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~~   88 (93)
                      .++++.+++.+.+.||+|+||.||+|.+.+      +..||||.++..
T Consensus        20 ~~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~   67 (308)
T 4gt4_A           20 LKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK   67 (308)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-
T ss_pred             cccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcc
Confidence            467888899999999999999999999842      468999999754

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=98.40  E-value=3.6e-07  Score=65.60  Aligned_cols=45  Identities=64%  Similarity=1.096  Sum_probs=40.0

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCCC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS   89 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~~   89 (93)
                      ...|+++.+.+.+.+.||+|+||.||+|.+.+...||||.++...
T Consensus       176 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~  220 (452)
T 1fmk_A          176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT  220 (452)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS
T ss_pred             ccccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC
Confidence            356999999999999999999999999999887789999997643

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=98.31  E-value=6.8e-07  Score=62.44  Aligned_cols=43  Identities=33%  Similarity=0.461  Sum_probs=36.5

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~~   88 (93)
                      ..+++++.++.+.+.||+|+||.||+|.+++      +..||||.++..
T Consensus        34 ~~~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~   82 (329)
T 4aoj_A           34 CVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA   82 (329)
T ss_dssp             CSCBCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC
T ss_pred             hhcccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC
Confidence            3467888999999999999999999999853      568999999754

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=98.31  E-value=1.3e-06  Score=64.08  Aligned_cols=45  Identities=64%  Similarity=1.096  Sum_probs=40.2

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCCC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS   89 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~~   89 (93)
                      ...|+++.+.+.+.+.||+|+||.||+|.+.+...||||.++...
T Consensus       259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~  303 (535)
T 2h8h_A          259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT  303 (535)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS
T ss_pred             ccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC
Confidence            367999999999999999999999999999887789999997643

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=98.30  E-value=6e-07  Score=61.96  Aligned_cols=41  Identities=39%  Similarity=0.554  Sum_probs=33.3

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~~   88 (93)
                      ++|+++++.+.+.||+|+||.||+|.+.+      +..||||.++..
T Consensus         8 ~~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~   54 (299)
T 4asz_A            8 QHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA   54 (299)
T ss_dssp             CBCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC
T ss_pred             cccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC
Confidence            57888999999999999999999999742      568999999754

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=98.26  E-value=1.9e-06  Score=61.75  Aligned_cols=44  Identities=59%  Similarity=1.040  Sum_probs=39.8

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ...|+++..++.+.+.||+|+||.||+|.++.+..||||.++..
T Consensus       180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~  223 (454)
T 1qcf_A          180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG  223 (454)
T ss_dssp             TTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTT
T ss_pred             ccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCC
Confidence            45699999999999999999999999999987788999999764

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=98.18  E-value=9.5e-07  Score=64.17  Aligned_cols=44  Identities=48%  Similarity=0.990  Sum_probs=38.8

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      ...|++...++.+.+.||+|+||.||+|.+.. +..||||.++..
T Consensus       212 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~  256 (495)
T 1opk_A          212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED  256 (495)
T ss_dssp             SSCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS
T ss_pred             ccccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc
Confidence            35699999999999999999999999999864 678999999754

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=98.09  E-value=3.5e-06  Score=57.88  Aligned_cols=33  Identities=36%  Similarity=0.882  Sum_probs=28.8

Q ss_pred             CceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||+|.+.+ ..||||.++.
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~~g-~~VAvK~l~~   36 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKWRG-EEVAVKIFSS   36 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETT-EEEEEEEECG
T ss_pred             EEEEEEEEeeCCCeEEEEEEECC-EEEEEEEECc
Confidence            46788899999999999999975 6899999864

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=98.07  E-value=5.9e-06  Score=54.87  Aligned_cols=44  Identities=57%  Similarity=1.109  Sum_probs=39.3

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      .++|++....+.+.+.||+|+||.||+|...++..||+|.++..
T Consensus         5 ~~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~   48 (279)
T 1qpc_A            5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG   48 (279)
T ss_dssp             TCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT
T ss_pred             hhhcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCC
Confidence            35799999999999999999999999999887778999998654

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=98.01  E-value=5.6e-06  Score=55.09  Aligned_cols=43  Identities=49%  Similarity=0.884  Sum_probs=36.0

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ..|+++..++.+.+.||+|+||.||++.+.++..||+|.++..
T Consensus        17 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~   59 (283)
T 3gen_A           17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG   59 (283)
T ss_dssp             CTTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTT
T ss_pred             CCccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCC
Confidence            5699999999999999999999999999988778999999754

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=97.96  E-value=1.2e-05  Score=53.20  Aligned_cols=44  Identities=50%  Similarity=0.903  Sum_probs=37.7

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS   89 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~~   89 (93)
                      ..|.++...+.+.+.||+|+||.||++.+.++..||+|.+....
T Consensus         3 ~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~   46 (269)
T 4hcu_A            3 GKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA   46 (269)
T ss_dssp             --CBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS
T ss_pred             ccEEeChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc
Confidence            45899999999999999999999999998777789999987543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=97.94  E-value=1.3e-05  Score=56.01  Aligned_cols=44  Identities=32%  Similarity=0.687  Sum_probs=38.7

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.|+++.+++.+.+.||+|+||.||+|.+. ++..||+|.++..
T Consensus       106 ~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~  150 (377)
T 3cbl_A          106 KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET  150 (377)
T ss_dssp             CCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT
T ss_pred             ccccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc
Confidence            4579999999999999999999999999986 5679999998653

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=97.89  E-value=1.7e-05  Score=54.00  Aligned_cols=43  Identities=33%  Similarity=0.571  Sum_probs=35.5

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ...|+++..++.+.+.||+|+||.||++.+.+ ..||+|.+...
T Consensus        29 ~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~-~~vavK~~~~~   71 (309)
T 3p86_A           29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHG-SDVAVKILMEQ   71 (309)
T ss_dssp             ---CBCCGGGEEEEEEEEECSSEEEEEEEETT-EEEEEEEECCC
T ss_pred             cccccCChhHceeeeEeecCCCeEEEEEEECC-CcEEEEEecCC
Confidence            35688999999999999999999999999864 68999998654

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=97.89  E-value=2e-05  Score=51.80  Aligned_cols=42  Identities=52%  Similarity=0.937  Sum_probs=37.2

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      .|.++...+.+.+.||+|+||.||++.+.++..||+|.++..
T Consensus         2 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~   43 (267)
T 3t9t_A            2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG   43 (267)
T ss_dssp             -CBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT
T ss_pred             ceEEchhheeeeeEecCCCceeEEEEEecCCCeEEEEEcccc
Confidence            488888999999999999999999999877778999998754

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=97.87  E-value=2.2e-05  Score=51.82  Aligned_cols=43  Identities=42%  Similarity=0.744  Sum_probs=37.2

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCCC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS   89 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~~   89 (93)
                      .|++....+.+.+.||+|+||.||++.+.++..||+|.++...
T Consensus         2 ~~~l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~   44 (268)
T 3sxs_A            2 HMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS   44 (268)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT
T ss_pred             ceEechhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC
Confidence            3677788888999999999999999999887789999987543

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=97.76  E-value=3.3e-05  Score=55.28  Aligned_cols=42  Identities=31%  Similarity=0.692  Sum_probs=37.6

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ..|+++..++.+.+.||+|+||.||+|.+.+ ..||||.++..
T Consensus       186 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~-~~vavK~~~~~  227 (450)
T 1k9a_A          186 SGWALNMKELKLLQTIGKGEFGDVMLGDYRG-NKVAVKCIKND  227 (450)
T ss_dssp             TTCBCCGGGEEEEEEEEECSSEEEEEEEETT-EEEEEEEESSC
T ss_pred             cccccChHHeEEEeeecCcCCeeEEEEEecC-CeEEEEEeCCc
Confidence            4699999999999999999999999999875 58999999754

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=97.75  E-value=5e-05  Score=53.34  Aligned_cols=39  Identities=21%  Similarity=0.313  Sum_probs=31.3

Q ss_pred             EecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .....+.+.+.||+|+||.||+|+.+ .+..||||.++..
T Consensus        55 ~~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~   94 (336)
T 4g3f_A           55 EEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE   94 (336)
T ss_dssp             BTTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETT
T ss_pred             cchhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHH
Confidence            33455667788999999999999975 4679999999754

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=97.73  E-value=5.2e-05  Score=50.71  Aligned_cols=43  Identities=37%  Similarity=0.836  Sum_probs=35.6

Q ss_pred             CCCceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         44 TRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        44 ~~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ....+++....+.+.+.||+|+||.||+|.+.+  .+|+|.++..
T Consensus        15 ~~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~   57 (289)
T 3og7_A           15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVT   57 (289)
T ss_dssp             ---CCBCCTTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCS
T ss_pred             CCCCCccCccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEecc
Confidence            345689999999999999999999999999765  5899998653

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=97.68  E-value=5.1e-05  Score=52.79  Aligned_cols=34  Identities=32%  Similarity=0.386  Sum_probs=29.3

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      +++.+.+.||+|+||.||+++.. ++..||+|.++
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~   66 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE   66 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEE
Confidence            46778889999999999999974 46799999985

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=97.67  E-value=6.3e-05  Score=51.26  Aligned_cols=42  Identities=24%  Similarity=0.434  Sum_probs=36.8

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      ..+|.+....+.+.+.||+|+||.||+|.+.+ ..||+|.++.
T Consensus        16 ~~n~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~vavK~~~~   57 (322)
T 3soc_A           16 TENLYFQSMPLQLLEVKARGRFGCVWKAQLLN-EYVAVKIFPI   57 (322)
T ss_dssp             CCCEEETTEEEEEEEEEECSTTCEEEEEEETT-EEEEEEEECG
T ss_pred             ccccccchhhchhhheecccCceEEEEEEECC-CEEEEEEeec
Confidence            35688999999999999999999999999875 6899999854

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=97.65  E-value=4.4e-05  Score=52.50  Aligned_cols=34  Identities=29%  Similarity=0.520  Sum_probs=26.6

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||+++.. ++..||||.++.
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~   40 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRL   40 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEE
T ss_pred             hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEec
Confidence            4566789999999999999975 467999999864

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=97.63  E-value=7.4e-05  Score=52.67  Aligned_cols=36  Identities=28%  Similarity=0.340  Sum_probs=29.9

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +..+.+.+.||+|+||.||+|... ++..||||.++.
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~  109 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDL  109 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEG
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEec
Confidence            345777789999999999999985 478999999853

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=97.61  E-value=0.00011  Score=52.43  Aligned_cols=36  Identities=22%  Similarity=0.416  Sum_probs=30.5

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ..+.+.+.||+|+||.||+|+.. .+..||||.++..
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~   90 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNA   90 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTT
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcc
Confidence            45788899999999999999974 4789999999653

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=97.59  E-value=0.0001  Score=50.32  Aligned_cols=44  Identities=34%  Similarity=0.539  Sum_probs=36.3

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeC--------CCCeEEEEEecCC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWN--------NTTPVAIKTLKMG   88 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~--------~~~~vavK~l~~~   88 (93)
                      ...|++....+.+.+.||+|+||.||++.+.        .+..||+|.++..
T Consensus        27 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~   78 (334)
T 2pvf_A           27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD   78 (334)
T ss_dssp             CTTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT
T ss_pred             CccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC
Confidence            3569999999999999999999999999873        2467999998654

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=97.58  E-value=6.6e-05  Score=53.01  Aligned_cols=36  Identities=19%  Similarity=0.320  Sum_probs=24.3

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +++.+.+.||+|+||.||+++.. .+..||||.++..
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~   60 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINIS   60 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECT
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehH
Confidence            46777889999999999999974 4789999999654

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=97.58  E-value=0.0001  Score=49.43  Aligned_cols=44  Identities=41%  Similarity=0.684  Sum_probs=37.0

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEe------CCCCeEEEEEecCC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLW------NNTTPVAIKTLKMG   88 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~------~~~~~vavK~l~~~   88 (93)
                      ...|+++...+.+.+.||+|+||.||++.+      ..+..||+|.++..
T Consensus        15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~   64 (313)
T 1t46_A           15 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS   64 (313)
T ss_dssp             CGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT
T ss_pred             ccccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc
Confidence            356999999999999999999999999985      23568999998654

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=97.58  E-value=8.5e-05  Score=51.04  Aligned_cols=32  Identities=38%  Similarity=0.511  Sum_probs=27.0

Q ss_pred             eeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .+.+.||+|+||.||+|.... +..||+|.+..
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~   61 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQD   61 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEG
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEch
Confidence            466789999999999999854 67899999864

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=97.56  E-value=0.00015  Score=50.62  Aligned_cols=45  Identities=36%  Similarity=0.531  Sum_probs=37.1

Q ss_pred             CCCceeEecCCceeeceEeeecccEEEEEEeCC--------CCeEEEEEecCC
Q psy12538         44 TRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN--------TTPVAIKTLKMG   88 (93)
Q Consensus        44 ~~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~--------~~~vavK~l~~~   88 (93)
                      ....|++....+.+.+.||+|+||.||++...+        ...||+|.++..
T Consensus        60 ~~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~  112 (382)
T 3tt0_A           60 EDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD  112 (382)
T ss_dssp             CCTTTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT
T ss_pred             cCcccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc
Confidence            345699999999999999999999999998622        347999998654

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=97.55  E-value=0.00013  Score=52.68  Aligned_cols=37  Identities=27%  Similarity=0.322  Sum_probs=30.6

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +..+.+.+.||+|+||.||+|+.. .+..||||.++..
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~  187 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR  187 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEST
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEecc
Confidence            345777789999999999999975 4789999998643

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=97.54  E-value=0.00013  Score=49.57  Aligned_cols=44  Identities=20%  Similarity=0.478  Sum_probs=36.9

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ...|++...++.+.+.||+|+||.||++... ++..||+|.++..
T Consensus        14 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~   58 (327)
T 3aln_A           14 EQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRST   58 (327)
T ss_dssp             CEEECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECC
T ss_pred             HHhcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecc
Confidence            3568888899999999999999999999985 4678999998653

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=97.53  E-value=9.7e-05  Score=50.43  Aligned_cols=35  Identities=29%  Similarity=0.481  Sum_probs=26.6

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ++.+.+.||+|+||.||++... ++..||+|.++..
T Consensus        14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~   49 (275)
T 3hyh_A           14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKK   49 (275)
T ss_dssp             CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHH
Confidence            5777889999999999999964 4789999998643

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=97.52  E-value=5.8e-05  Score=51.70  Aligned_cols=43  Identities=42%  Similarity=0.660  Sum_probs=36.7

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC------CCCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN------NTTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~------~~~~vavK~l~~~   88 (93)
                      ..|+++...+.+.+.||+|+||.||++.+.      .+..||||.++..
T Consensus        15 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~   63 (359)
T 3vhe_A           15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG   63 (359)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT
T ss_pred             ccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc
Confidence            469999999999999999999999999852      2468999999754

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=97.51  E-value=0.00013  Score=50.52  Aligned_cols=38  Identities=29%  Similarity=0.413  Sum_probs=30.6

Q ss_pred             EecCCceeeceEeeecccEEEEEEeC----CCCeEEEEEecC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWN----NTTPVAIKTLKM   87 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~----~~~~vavK~l~~   87 (93)
                      ++.+++.+.+.||+|+||.||+++..    .+..||+|.++.
T Consensus        21 ~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~   62 (304)
T 3ubd_A           21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKK   62 (304)
T ss_dssp             CCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEES
T ss_pred             CCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEeh
Confidence            34467888899999999999999852    256899999864

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=97.51  E-value=0.00017  Score=47.24  Aligned_cols=41  Identities=34%  Similarity=0.714  Sum_probs=34.5

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      .++++...+.+.+.||+|+||.||+|.+.+ ..+|+|.++..
T Consensus         4 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~avK~~~~~   44 (271)
T 3kmu_A            4 HSGIDFKQLNFLTKLNENHSGELWKGRWQG-NDIVVKVLKVR   44 (271)
T ss_dssp             CCCCCGGGCEEEEEEEEETTEEEEEEEETT-EEEEEEEECCT
T ss_pred             cCCCCHHHhHHHHHhcCCCcceEEEEEECC-eeEEEEEeccc
Confidence            356677788889999999999999999874 68999998653

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=97.49  E-value=0.00018  Score=49.75  Aligned_cols=44  Identities=20%  Similarity=0.391  Sum_probs=35.9

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEe------CCCCeEEEEEecCC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLW------NNTTPVAIKTLKMG   88 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~------~~~~~vavK~l~~~   88 (93)
                      ...+++....+.+.+.||+|+||.||+|.+      ..+..||+|.++..
T Consensus        57 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~  106 (365)
T 3e7e_A           57 KTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA  106 (365)
T ss_dssp             SCEEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC
T ss_pred             ceeEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC
Confidence            356788888899999999999999999952      34679999998754

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=97.49  E-value=0.00011  Score=50.04  Aligned_cols=42  Identities=40%  Similarity=0.625  Sum_probs=35.8

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC------CCCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN------NTTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~------~~~~vavK~l~~   87 (93)
                      ..|+++..++.+.+.||+|+||.||++...      .+..||+|.++.
T Consensus        38 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~   85 (344)
T 1rjb_A           38 LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKE   85 (344)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC
T ss_pred             cCcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccc
Confidence            469999999999999999999999999962      245799999864

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=97.49  E-value=0.00018  Score=48.35  Aligned_cols=41  Identities=29%  Similarity=0.381  Sum_probs=29.1

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.-...+.+.+.||+|+||.||++... ++..||+|.++..
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~   67 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRN   67 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCST
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecc
Confidence            3444567888899999999999999863 4678999998643

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=97.46  E-value=0.00015  Score=48.10  Aligned_cols=41  Identities=22%  Similarity=0.349  Sum_probs=33.4

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEe-CCCCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~   88 (93)
                      |++...++.+.+.||+|+||.||++.. ..+..||+|.++..
T Consensus         2 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   43 (290)
T 3fme_A            2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRAT   43 (290)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC--
T ss_pred             CcccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecc
Confidence            566777888899999999999999997 35678999998643

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=97.43  E-value=0.00015  Score=50.57  Aligned_cols=43  Identities=35%  Similarity=0.537  Sum_probs=35.2

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC--------CCCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN--------NTTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~--------~~~~vavK~l~~~   88 (93)
                      ..|++....+.+.+.||+|+||.||++.+.        .+..||+|.++..
T Consensus        74 ~~~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~  124 (370)
T 2psq_A           74 PKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD  124 (370)
T ss_dssp             TTTBCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT
T ss_pred             ccccccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC
Confidence            457888888999999999999999999862        2346999998754

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=97.42  E-value=0.00018  Score=48.77  Aligned_cols=39  Identities=31%  Similarity=0.690  Sum_probs=32.2

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      +.++...+.+.+.||+|+||.||+|.+.+ ..||+|.++.
T Consensus         8 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~vavK~~~~   46 (336)
T 3g2f_A            8 PSLDLDNLKLLELIGRGRYGAVYKGSLDE-RPVAVKVFSF   46 (336)
T ss_dssp             -CCCTTSEEEEEEEEECSSEEEEEEEETT-EEEEEEEEEG
T ss_pred             CCcChHHhheeeecccCCCeEEEEEEECC-eEEEEEEeec
Confidence            45666788888999999999999998854 6899999853

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=97.41  E-value=0.0002  Score=48.01  Aligned_cols=43  Identities=37%  Similarity=0.587  Sum_probs=36.0

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC------CCCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN------NTTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~------~~~~vavK~l~~~   88 (93)
                      ..|+++..++.+.+.||+|+||.||++...      ++..||+|.++..
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~   64 (314)
T 2ivs_A           16 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN   64 (314)
T ss_dssp             TTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT
T ss_pred             cccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC
Confidence            458888899999999999999999999862      2468999998653

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=97.40  E-value=6.3e-05  Score=50.98  Aligned_cols=43  Identities=30%  Similarity=0.498  Sum_probs=35.8

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      .++++...++.+.+.||+|+||.||++...++..||+|.++..
T Consensus        23 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~   65 (326)
T 3uim_A           23 RELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEE   65 (326)
T ss_dssp             HHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-
T ss_pred             HHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccc
Confidence            4456667788888999999999999999877789999998653

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=97.40  E-value=0.00023  Score=47.15  Aligned_cols=42  Identities=31%  Similarity=0.692  Sum_probs=35.8

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ..|.+...++.+.+.||+|+||.||++.+.+ ..||+|.++..
T Consensus        14 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~vavK~~~~~   55 (278)
T 1byg_A           14 SGWALNMKELKLLQTIGKGEFGDVMLGDYRG-NKVAVKCIKND   55 (278)
T ss_dssp             -CCBCCGGGEEEEEEEEECSSCEEEEEEETT-EEEEEEECCCC
T ss_pred             ccccCChhhceEEeEEecCCCceEEEEEEcC-CEEEEEEecch
Confidence            4588888899999999999999999999874 68999998653

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=97.39  E-value=0.00041  Score=46.90  Aligned_cols=36  Identities=39%  Similarity=0.650  Sum_probs=30.0

Q ss_pred             CCceeeceEeeecccEEEEEEe-CCCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~   88 (93)
                      ..+.+.+.||+|+||.||++.. .++..||+|.++..
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   72 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV   72 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc
Confidence            4677788999999999999986 45679999998643

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=97.39  E-value=0.00027  Score=48.51  Aligned_cols=40  Identities=20%  Similarity=0.340  Sum_probs=33.1

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ++....+.+.+.||+|+||.||++....+..||+|.+...
T Consensus         5 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~   44 (343)
T 3dbq_A            5 SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLE   44 (343)
T ss_dssp             ESSSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECT
T ss_pred             eeecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeecc
Confidence            3445567778899999999999999877889999998643

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=97.39  E-value=0.0001  Score=48.96  Aligned_cols=43  Identities=49%  Similarity=1.027  Sum_probs=37.5

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      ..|++...++.+.+.||+|+||.||++.... +..||+|.++..
T Consensus         6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~   49 (288)
T 3kfa_A            6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED   49 (288)
T ss_dssp             CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC
T ss_pred             hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC
Confidence            5699999999999999999999999999864 668999998654

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=97.38  E-value=0.00013  Score=49.24  Aligned_cols=42  Identities=45%  Similarity=0.841  Sum_probs=36.1

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~   87 (93)
                      ..|++....+.+.+.||+|+||.||+|.+.+      +..||+|.+..
T Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~   65 (322)
T 1p4o_A           18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE   65 (322)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCT
T ss_pred             hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccc
Confidence            5699999999999999999999999998642      46799999864

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=97.37  E-value=0.00017  Score=48.50  Aligned_cols=41  Identities=32%  Similarity=0.790  Sum_probs=36.1

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      ...|+++...+.+.+.||+|+||.||+|.+.+  .+++|.++.
T Consensus        25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~   65 (319)
T 2y4i_B           25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDI   65 (319)
T ss_dssp             GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCC
T ss_pred             cccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeec
Confidence            36799999999999999999999999999875  589999864

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=97.35  E-value=0.00041  Score=47.02  Aligned_cols=44  Identities=41%  Similarity=0.671  Sum_probs=36.8

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecCC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMG   88 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~~   88 (93)
                      ...|+++..++.+.+.||+|+||.||++....      ...||+|.++..
T Consensus        38 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~   87 (333)
T 2i1m_A           38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST   87 (333)
T ss_dssp             CGGGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTT
T ss_pred             cccccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccc
Confidence            34699999999999999999999999999743      236999998654

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=97.35  E-value=0.00037  Score=46.95  Aligned_cols=43  Identities=19%  Similarity=0.317  Sum_probs=36.5

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      +...+....+.+.+.||+|+||.||++....+..||+|.+...
T Consensus        21 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~   63 (313)
T 3cek_A           21 QSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLE   63 (313)
T ss_dssp             CEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECS
T ss_pred             eeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccc
Confidence            4567777788889999999999999999877789999998643

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=97.33  E-value=0.00024  Score=47.59  Aligned_cols=43  Identities=42%  Similarity=0.660  Sum_probs=36.1

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC------CCCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN------NTTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~------~~~~vavK~l~~~   88 (93)
                      ..|++....+.+.+.||+|+||.||++.+.      .+..||+|.++..
T Consensus        20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~   68 (316)
T 2xir_A           20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG   68 (316)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT
T ss_pred             cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC
Confidence            458888899999999999999999999852      3468999998654

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=97.32  E-value=0.00017  Score=49.03  Aligned_cols=40  Identities=35%  Similarity=0.493  Sum_probs=31.5

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.-...+.+.+.||+|+||.||+|... ++..||+|.++.
T Consensus        38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~   78 (320)
T 3a99_A           38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK   78 (320)
T ss_dssp             --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEG
T ss_pred             cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEec
Confidence            4444567788889999999999999863 467899999864

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=97.32  E-value=0.00032  Score=46.68  Aligned_cols=42  Identities=38%  Similarity=0.677  Sum_probs=33.8

Q ss_pred             ceeEecCCceeec-eEeeecccEEEEEEeC---CCCeEEEEEecCC
Q psy12538         47 QWEIDRNSLKFVR-KLGSGQFGEVWEGLWN---NTTPVAIKTLKMG   88 (93)
Q Consensus        47 ~~ei~~~~~~~~~-~iG~G~fG~V~~g~~~---~~~~vavK~l~~~   88 (93)
                      .|.+.+.++.+.. .||+|+||.||+|.+.   .+..||+|.++..
T Consensus         3 ~~~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~   48 (287)
T 1u59_A            3 KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG   48 (287)
T ss_dssp             CCBCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS
T ss_pred             cccccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc
Confidence            4677777777776 8999999999999864   4567999998753

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=97.32  E-value=0.00047  Score=45.96  Aligned_cols=35  Identities=23%  Similarity=0.461  Sum_probs=29.8

Q ss_pred             CceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||++....+..+|+|.++..
T Consensus         3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~   37 (288)
T 1ob3_A            3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLE   37 (288)
T ss_dssp             SEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCS
T ss_pred             cchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecc
Confidence            46677899999999999999876789999998643

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=97.31  E-value=0.00036  Score=46.29  Aligned_cols=42  Identities=40%  Similarity=0.711  Sum_probs=34.7

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCC----CCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~   87 (93)
                      .+|++....+.+.+.||+|+||.||+|.+..    ...||+|.++.
T Consensus         8 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~   53 (281)
T 1mp8_A            8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN   53 (281)
T ss_dssp             -CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTT
T ss_pred             cceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccc
Confidence            4588888899999999999999999999743    34689998764

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=97.28  E-value=0.0005  Score=47.87  Aligned_cols=41  Identities=24%  Similarity=0.340  Sum_probs=30.2

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEe-CCCCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~   88 (93)
                      ++.....+.+.+.||+|+||.||++.. .++..||+|.+...
T Consensus         2 l~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~   43 (383)
T 3eb0_A            2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQD   43 (383)
T ss_dssp             ----CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECC
T ss_pred             CccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecC
Confidence            344556778888999999999999986 45679999998654

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=97.26  E-value=0.00045  Score=46.49  Aligned_cols=42  Identities=26%  Similarity=0.264  Sum_probs=35.8

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+++....+.+.+.||+|+||.||++... .+..||+|.+..
T Consensus        21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   63 (337)
T 3ll6_A           21 QTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLS   63 (337)
T ss_dssp             CEEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEE
T ss_pred             ceeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecC
Confidence            568888888999999999999999999974 467899998743

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=97.26  E-value=0.00041  Score=47.02  Aligned_cols=36  Identities=22%  Similarity=0.457  Sum_probs=30.0

Q ss_pred             CCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ..+.+.+.||+|+||.||++....+..||+|.++..
T Consensus        21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~   56 (311)
T 3niz_A           21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLD   56 (311)
T ss_dssp             CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC--
T ss_pred             hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecc
Confidence            456777899999999999999877889999998643

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=97.25  E-value=0.00037  Score=47.58  Aligned_cols=42  Identities=40%  Similarity=0.609  Sum_probs=34.2

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeC----CCCeEEEEEecCC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWN----NTTPVAIKTLKMG   88 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~----~~~~vavK~l~~~   88 (93)
                      .+++....+.+.+.||+|+||.||+|.+.    ....||||.++..
T Consensus        43 ~~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~   88 (325)
T 3kul_A           43 TREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG   88 (325)
T ss_dssp             CCBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT
T ss_pred             ccccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC
Confidence            35677788888999999999999999974    2345999998753

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=97.25  E-value=0.00033  Score=47.51  Aligned_cols=42  Identities=38%  Similarity=0.600  Sum_probs=35.2

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecCC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMG   88 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~~   88 (93)
                      .|++...++.+.+.||+|+||.||++...+      +..||+|.++..
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~   88 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE   88 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccc
Confidence            467788899999999999999999999753      368999998754

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=97.24  E-value=0.00042  Score=45.54  Aligned_cols=38  Identities=34%  Similarity=0.650  Sum_probs=30.7

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      +++..++.+.+.||+|+||.||++.+.+ ..+|+|.++.
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~vavK~~~~   40 (271)
T 3dtc_A            3 EIDFAELTLEEIIGIGGFGKVYRAFWIG-DEVAVKAARH   40 (271)
T ss_dssp             BCCTTSEEEEEEEEEETTEEEEEEEETT-EEEEEEEC--
T ss_pred             ccchhheeeeeeeccCCCeEEEEEEEcC-CeEEEEEEec
Confidence            4556678888999999999999999874 6899999864

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=97.23  E-value=0.00032  Score=49.64  Aligned_cols=34  Identities=12%  Similarity=-0.052  Sum_probs=28.5

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      ..+...+.||+|+||.||+|... .+..||||.++
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~  112 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPY  112 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEC
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEe
Confidence            34666789999999999999964 46799999987

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=97.23  E-value=0.00054  Score=46.34  Aligned_cols=35  Identities=26%  Similarity=0.394  Sum_probs=29.5

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||+|... ++..||||.+..
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~   92 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMS   92 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESS
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecc
Confidence            45667789999999999999985 578999998754

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=97.23  E-value=0.00056  Score=48.06  Aligned_cols=41  Identities=20%  Similarity=0.317  Sum_probs=33.4

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ..+....+.+.+.||+|+||.||++....+..||||.+...
T Consensus        51 ~~~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~   91 (390)
T 2zmd_A           51 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLE   91 (390)
T ss_dssp             EEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECT
T ss_pred             ccccCCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecc
Confidence            34445567788899999999999999877789999998643

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=97.22  E-value=0.00036  Score=47.15  Aligned_cols=42  Identities=33%  Similarity=0.473  Sum_probs=28.8

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeCCC----CeEEEEEecCC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT----TPVAIKTLKMG   88 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~----~~vavK~l~~~   88 (93)
                      .+.+....+.+.+.||+|+||.||++.....    ..||+|.++..
T Consensus        17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~   62 (323)
T 3qup_A           17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKAD   62 (323)
T ss_dssp             TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC---
T ss_pred             hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccc
Confidence            4667777888899999999999999997542    27899998653

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=97.21  E-value=0.00023  Score=49.78  Aligned_cols=42  Identities=40%  Similarity=0.665  Sum_probs=34.1

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeC----CCCeEEEEEecCC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWN----NTTPVAIKTLKMG   88 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~----~~~~vavK~l~~~   88 (93)
                      ..+++..++.+.+.||+|+||.||+|.+.    .+..||+|.++..
T Consensus        39 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~   84 (373)
T 2qol_A           39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG   84 (373)
T ss_dssp             SCBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTT
T ss_pred             HhhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCc
Confidence            35777788889999999999999999874    4568999998754

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=97.18  E-value=0.0005  Score=45.76  Aligned_cols=34  Identities=32%  Similarity=0.828  Sum_probs=28.9

Q ss_pred             CCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      .++.+.+.||+|+||.||+|.+. +..||+|.+..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~   41 (301)
T 3q4u_A            8 RDITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSS   41 (301)
T ss_dssp             GGCEEEEEEEECSSEEEEEEEET-TEEEEEEEECG
T ss_pred             CcEEEEEeeccCCCcEEEEEEEC-CEEEEEEEecc
Confidence            46777889999999999999985 46899999854

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=97.18  E-value=0.00054  Score=46.04  Aligned_cols=34  Identities=26%  Similarity=0.509  Sum_probs=27.7

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++... ++..||+|.++.
T Consensus         7 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~   41 (332)
T 3qd2_B            7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRL   41 (332)
T ss_dssp             HEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEEC
T ss_pred             cCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeec
Confidence            4566789999999999999985 577999999864

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=97.18  E-value=0.00058  Score=45.53  Aligned_cols=40  Identities=33%  Similarity=0.586  Sum_probs=32.1

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeC-----CCCeEEEEEecCC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWN-----NTTPVAIKTLKMG   88 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~-----~~~~vavK~l~~~   88 (93)
                      ++....+.+.+.||+|+||.||++.+.     .+..||+|.++..
T Consensus         6 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~   50 (295)
T 3ugc_A            6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS   50 (295)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC
T ss_pred             cCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC
Confidence            445567788889999999999999863     3678999998653

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=97.18  E-value=0.00041  Score=48.75  Aligned_cols=35  Identities=29%  Similarity=0.418  Sum_probs=28.2

Q ss_pred             CCceeeceEeeecccEEEEEEeC----CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN----NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~----~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||+|+.+    .+..||+|.+..
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~   59 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIP   59 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECT
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcc
Confidence            35777889999999999999753    356899998854

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=97.16  E-value=0.00047  Score=52.67  Aligned_cols=35  Identities=31%  Similarity=0.422  Sum_probs=30.1

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      ..++.+.+.||+|+||.||+++.. .+..||+|.++
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~  223 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD  223 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEe
Confidence            356888899999999999999975 47799999985

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.15  E-value=0.00056  Score=49.18  Aligned_cols=35  Identities=11%  Similarity=0.184  Sum_probs=29.9

Q ss_pred             ceeeceEeeecccEEEEEEeCCCCeEEEEEecCCC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS   89 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~~   89 (93)
                      +.+...||+|+||.||+|...++..||||.++...
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~  131 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGR  131 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTE
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEeccc
Confidence            45678999999999999998878899999987543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=97.15  E-value=0.00021  Score=48.81  Aligned_cols=36  Identities=39%  Similarity=0.684  Sum_probs=30.0

Q ss_pred             cCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ...+.+.+.||+|+||.||+++.. +..||+|.++..
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~vAvK~~~~~   54 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIAD-HTPVAIKIIAIE   54 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEET-TEEEEEEEEEES
T ss_pred             cccchheeeecccCceEEEEEEeC-CceEEEEEEecC
Confidence            456677789999999999999985 479999999654

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=97.15  E-value=0.00037  Score=50.13  Aligned_cols=39  Identities=28%  Similarity=0.476  Sum_probs=32.7

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEec
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLK   86 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~   86 (93)
                      +.+...++.+.+.||+|+||.||++.... +..+|+|.++
T Consensus        69 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~  108 (437)
T 4aw2_A           69 MRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILN  108 (437)
T ss_dssp             HSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEE
T ss_pred             ccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEE
Confidence            34556788888999999999999999864 6789999985

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=97.14  E-value=0.00069  Score=47.59  Aligned_cols=38  Identities=24%  Similarity=0.434  Sum_probs=31.3

Q ss_pred             EecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      +..+++.+.+.||+|+||.||+++.+. +..+|+|.++.
T Consensus        35 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~   73 (373)
T 2r5t_A           35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQK   73 (373)
T ss_dssp             CCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEG
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEH
Confidence            344678888999999999999999854 67899999854

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=97.14  E-value=0.00046  Score=47.98  Aligned_cols=36  Identities=11%  Similarity=-0.041  Sum_probs=30.0

Q ss_pred             cCCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      ...+.+.+.||+|+||.||+|.. .++..||||.++.
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~  108 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYF  108 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEee
Confidence            45677788999999999999997 4478999999863

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=97.13  E-value=0.00038  Score=48.42  Aligned_cols=41  Identities=41%  Similarity=0.669  Sum_probs=34.1

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKM   87 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~   87 (93)
                      .+++...++.+.+.||+|+||.||+|.+.+      +..||+|.++.
T Consensus        65 ~~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~  111 (367)
T 3l9p_A           65 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE  111 (367)
T ss_dssp             SCBCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCS
T ss_pred             hhhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccc
Confidence            467777888899999999999999999642      45799999864

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=97.13  E-value=0.00058  Score=45.21  Aligned_cols=42  Identities=45%  Similarity=0.729  Sum_probs=33.9

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeCC----CCeEEEEEecCC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKMG   88 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~~   88 (93)
                      .|.+...++.+.+.||+|+||.||+|.+..    ...||+|.++..
T Consensus         6 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~   51 (281)
T 3cc6_A            6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD   51 (281)
T ss_dssp             CCSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTT
T ss_pred             cceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccc
Confidence            477777888889999999999999998743    235899998653

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=97.13  E-value=0.00073  Score=46.14  Aligned_cols=41  Identities=29%  Similarity=0.447  Sum_probs=32.6

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEe----CCCCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~----~~~~~vavK~l~~~   88 (93)
                      ..+..+++.+.+.||+|+||.||++..    ..+..+|+|.++..
T Consensus        12 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~   56 (327)
T 3a62_A           12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKA   56 (327)
T ss_dssp             -CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC
T ss_pred             CCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHH
Confidence            345556788888999999999999986    35678999998653

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=97.12  E-value=0.0012  Score=45.90  Aligned_cols=42  Identities=29%  Similarity=0.473  Sum_probs=34.6

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ..|++. ..+.+.+.||+|+||.||++... .+..||+|.+...
T Consensus        36 ~~~~l~-~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~   78 (371)
T 4exu_A           36 TAWELP-KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRP   78 (371)
T ss_dssp             EEEEEE-TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECST
T ss_pred             ceeccc-ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccc
Confidence            458887 47888899999999999999874 4679999998653

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=97.11  E-value=0.00071  Score=45.81  Aligned_cols=32  Identities=19%  Similarity=0.280  Sum_probs=27.4

Q ss_pred             eeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         57 FVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        57 ~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      +.+.||+|+||.||++.+.++..||+|.++..
T Consensus        94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~  125 (282)
T 1zar_A           94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVG  125 (282)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC-
T ss_pred             ecCEeccCCCceEEEEEeCCCCEEEEEEEECC
Confidence            55899999999999999966789999999653

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=97.11  E-value=0.0011  Score=44.64  Aligned_cols=36  Identities=14%  Similarity=0.156  Sum_probs=30.4

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      ..+.+.+.||+|+||.||++.... +..||+|.+...
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~   67 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQ   67 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTT
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcc
Confidence            457777899999999999999854 679999999754

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=97.11  E-value=0.00058  Score=46.18  Aligned_cols=38  Identities=26%  Similarity=0.464  Sum_probs=31.8

Q ss_pred             ecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         51 DRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        51 ~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ...++.+.+.||+|+||.||+|.++++..||+|.+...
T Consensus        37 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~   74 (321)
T 2qkw_B           37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE   74 (321)
T ss_dssp             CCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC
T ss_pred             HHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc
Confidence            34567777899999999999999877789999988653

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=97.11  E-value=0.00078  Score=46.87  Aligned_cols=39  Identities=31%  Similarity=0.507  Sum_probs=30.1

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+...++.+.+.||+|+||.||+++.. .+..||+|.++.
T Consensus        19 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~   58 (353)
T 3txo_A           19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKK   58 (353)
T ss_dssp             ----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEH
T ss_pred             CCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEH
Confidence            344567888899999999999999975 367899999853

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=97.10  E-value=0.0012  Score=44.25  Aligned_cols=40  Identities=20%  Similarity=0.199  Sum_probs=33.2

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+...++.+.+.||+|+||.||++... ++..||+|.+..
T Consensus         5 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~   45 (310)
T 3s95_A            5 RIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR   45 (310)
T ss_dssp             EEECGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC
T ss_pred             eeeChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc
Confidence            5566678888999999999999999975 467899998754

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=97.09  E-value=0.00073  Score=46.93  Aligned_cols=38  Identities=29%  Similarity=0.487  Sum_probs=30.5

Q ss_pred             EecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +...++.+.+.||+|+||.||+++.+ .+..||+|.++.
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~   52 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKK   52 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEH
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEh
Confidence            44567778889999999999999985 467899999853

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=97.09  E-value=0.0012  Score=44.06  Aligned_cols=35  Identities=23%  Similarity=0.487  Sum_probs=29.1

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||++... ++..||+|.++..
T Consensus         3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   38 (292)
T 3o0g_A            3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLD   38 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESS
T ss_pred             CceeeeEecCCCCeEEEEEEECCCCceEEEEeeecc
Confidence            4667789999999999999975 4678999998643

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=97.09  E-value=0.00055  Score=48.40  Aligned_cols=39  Identities=23%  Similarity=0.409  Sum_probs=32.5

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEec
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLK   86 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~   86 (93)
                      +++...++.+.+.||+|+||.||++.... +..+|+|.+.
T Consensus        10 ~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~   49 (384)
T 4fr4_A           10 EDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMN   49 (384)
T ss_dssp             CCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEE
T ss_pred             CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEe
Confidence            45666778888999999999999999754 6789999875

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=97.07  E-value=0.00055  Score=48.83  Aligned_cols=39  Identities=21%  Similarity=0.364  Sum_probs=32.9

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      +.+...++.+.+.||+|+||.||+++.+ .+..||+|.++
T Consensus        56 ~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~   95 (412)
T 2vd5_A           56 VRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMN   95 (412)
T ss_dssp             HSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred             ccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEe
Confidence            3456678888899999999999999985 46799999985

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=97.07  E-value=0.00076  Score=46.11  Aligned_cols=42  Identities=43%  Similarity=0.743  Sum_probs=34.3

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeCC-----CCeEEEEEecCC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-----TTPVAIKTLKMG   88 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~-----~~~vavK~l~~~   88 (93)
                      .+++....+.+.+.||+|+||.||+|.+..     ...||+|.++..
T Consensus        38 ~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~   84 (333)
T 1mqb_A           38 TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG   84 (333)
T ss_dssp             CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT
T ss_pred             cccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC
Confidence            467888889899999999999999998743     235999998653

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=97.06  E-value=0.00073  Score=45.63  Aligned_cols=37  Identities=32%  Similarity=0.598  Sum_probs=31.0

Q ss_pred             EecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      ++..++.+.+.||+|+||.||++.+.+ ..||+|.++.
T Consensus         5 i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~vavK~~~~   41 (307)
T 2eva_A            5 IDYKEIEVEEVVGRGAFGVVCKAKWRA-KDVAIKQIES   41 (307)
T ss_dssp             CCGGGEEEEEEEECCSSSEEEEEEETT-EEEEEEECSS
T ss_pred             CCHhHeeeeeEeecCCCceEEEEEECC-eeEEEEEecC
Confidence            445677788899999999999999875 6899999864

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=97.06  E-value=0.00061  Score=45.39  Aligned_cols=43  Identities=37%  Similarity=0.564  Sum_probs=32.1

Q ss_pred             CceeEecCCceeec-eEeeecccEEEEEEeC---CCCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVR-KLGSGQFGEVWEGLWN---NTTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~-~iG~G~fG~V~~g~~~---~~~~vavK~l~~~   88 (93)
                      .++.++...+.+.+ .||+|+||.||+|.+.   .+..||+|.++..
T Consensus         9 ~~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~   55 (291)
T 1xbb_A            9 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE   55 (291)
T ss_dssp             --CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC--
T ss_pred             ceeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccc
Confidence            34667777888877 8999999999999753   2468999998653

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=97.05  E-value=0.00072  Score=50.41  Aligned_cols=42  Identities=38%  Similarity=0.677  Sum_probs=32.8

Q ss_pred             ceeEecCCceeec-eEeeecccEEEEEEeC---CCCeEEEEEecCC
Q psy12538         47 QWEIDRNSLKFVR-KLGSGQFGEVWEGLWN---NTTPVAIKTLKMG   88 (93)
Q Consensus        47 ~~ei~~~~~~~~~-~iG~G~fG~V~~g~~~---~~~~vavK~l~~~   88 (93)
                      .|.+.+.++.+.+ .||+|+||.||+|.+.   .+..||||.++..
T Consensus       329 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~  374 (613)
T 2ozo_A          329 KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG  374 (613)
T ss_dssp             CSBCCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCC
T ss_pred             ceeccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCC
Confidence            3566666776666 7999999999999874   3457999999764

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=97.03  E-value=0.001  Score=49.46  Aligned_cols=35  Identities=23%  Similarity=0.244  Sum_probs=29.3

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ++.+.+.||+|+||.||++..+ .+..||+|.++..
T Consensus       158 ~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~  193 (573)
T 3uto_A          158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP  193 (573)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC
T ss_pred             ccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc
Confidence            5677889999999999999975 4679999998643

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=97.03  E-value=0.00082  Score=45.01  Aligned_cols=43  Identities=23%  Similarity=0.560  Sum_probs=30.2

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ..|.....++.+.+.||+|+||.||++... ++..||+|.+...
T Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   61 (318)
T 2dyl_A           18 QRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS   61 (318)
T ss_dssp             SEEECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETT
T ss_pred             hhhhhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEeccc
Confidence            457777788888899999999999999985 4679999998653

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=97.01  E-value=0.00069  Score=48.29  Aligned_cols=39  Identities=26%  Similarity=0.371  Sum_probs=32.2

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEec
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLK   86 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~   86 (93)
                      +.+...++.+.+.||+|+||.||+++... +..+|+|.++
T Consensus        64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~  103 (410)
T 3v8s_A           64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLS  103 (410)
T ss_dssp             HSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred             cccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEe
Confidence            34556678888999999999999999854 6789999985

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=97.01  E-value=0.001  Score=45.92  Aligned_cols=38  Identities=24%  Similarity=0.434  Sum_probs=30.9

Q ss_pred             EecCCceeeceEeeecccEEEEEEe----CCCCeEEEEEecC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLW----NNTTPVAIKTLKM   87 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~----~~~~~vavK~l~~   87 (93)
                      +...++.+.+.||+|+||.||++..    ..+..||+|.++.
T Consensus        51 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~   92 (355)
T 1vzo_A           51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKK   92 (355)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESE
T ss_pred             ccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeH
Confidence            3345777888999999999999987    2567999999853

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=97.00  E-value=0.001  Score=44.71  Aligned_cols=42  Identities=26%  Similarity=0.223  Sum_probs=33.4

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      ..+.++...+.+.+.||+|+||.||++.. ..+..||+|.+..
T Consensus        22 ~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   64 (317)
T 2buj_A           22 HMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILC   64 (317)
T ss_dssp             EEEEETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEE
T ss_pred             cEEEECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEec
Confidence            45778888899999999999999999997 4567999998743

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=96.99  E-value=0.00095  Score=46.16  Aligned_cols=36  Identities=28%  Similarity=0.393  Sum_probs=30.0

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..++.+.+.||+|+||.||+++.. .+..||+|.++.
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~   40 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRK   40 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEH
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeH
Confidence            456777889999999999999975 467899999853

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=96.99  E-value=0.0012  Score=45.28  Aligned_cols=36  Identities=31%  Similarity=0.457  Sum_probs=30.8

Q ss_pred             cCCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      ...+.+.+.||+|+||.||++....+..||+|.+..
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~   56 (362)
T 3pg1_A           21 QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFN   56 (362)
T ss_dssp             TCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECE
T ss_pred             ccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccc
Confidence            456777889999999999999987788999998854

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=96.99  E-value=0.00089  Score=44.54  Aligned_cols=33  Identities=15%  Similarity=0.225  Sum_probs=26.9

Q ss_pred             eeeceEeeecccEEEEEEe-CCCCe--EEEEEecCC
Q psy12538         56 KFVRKLGSGQFGEVWEGLW-NNTTP--VAIKTLKMG   88 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~-~~~~~--vavK~l~~~   88 (93)
                      .+...||+|+||.||+|.. .++..  ||||.++..
T Consensus        50 ~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~   85 (258)
T 1zth_A           50 AMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIE   85 (258)
T ss_dssp             EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC
T ss_pred             hhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECC
Confidence            3567899999999999998 55667  999987543

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=96.99  E-value=0.001  Score=44.48  Aligned_cols=37  Identities=24%  Similarity=0.315  Sum_probs=28.3

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ...+.+.+.||+|+||.||++... ++..||+|.+...
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~   49 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKK   49 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehh
Confidence            346778889999999999999864 4678999998643

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=96.98  E-value=0.0014  Score=44.71  Aligned_cols=34  Identities=32%  Similarity=0.544  Sum_probs=28.5

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++... ++..||+|.+..
T Consensus         8 ~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~   42 (323)
T 3tki_A            8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM   42 (323)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC
T ss_pred             hceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEc
Confidence            5666789999999999999975 567899999854

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=96.98  E-value=0.0019  Score=44.21  Aligned_cols=41  Identities=29%  Similarity=0.498  Sum_probs=33.8

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..|++. ..+.+.+.||+|+||.||+|... .+..||+|.+..
T Consensus        18 ~~~~l~-~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   59 (353)
T 3coi_A           18 TAWELP-KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSR   59 (353)
T ss_dssp             EEEEEE-TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESS
T ss_pred             cccccC-ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecc
Confidence            457776 46888889999999999999974 467999999865

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=96.97  E-value=0.00073  Score=46.79  Aligned_cols=37  Identities=27%  Similarity=0.269  Sum_probs=30.5

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMGS   89 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~~   89 (93)
                      ..+.+.+.||+|+||.||++... ++..||+|.++...
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~   99 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGA   99 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCS
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecc
Confidence            34667889999999999999975 56789999997643

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=96.97  E-value=0.0014  Score=44.60  Aligned_cols=34  Identities=26%  Similarity=0.521  Sum_probs=28.7

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||++... ++..||+|.++.
T Consensus         3 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~   37 (324)
T 3mtl_A            3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRL   37 (324)
T ss_dssp             SEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC
T ss_pred             ceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEec
Confidence            4667789999999999999975 467899999864

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=96.95  E-value=0.00048  Score=45.79  Aligned_cols=42  Identities=26%  Similarity=0.461  Sum_probs=27.2

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..|.+....+.+.+.||+|+||.||++... .+..||+|.+..
T Consensus         8 ~p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   50 (303)
T 2vwi_A            8 LPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINL   50 (303)
T ss_dssp             -----CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-
T ss_pred             cccccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEh
Confidence            347888889999999999999999999863 467899998754

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=96.94  E-value=0.001  Score=46.29  Aligned_cols=38  Identities=29%  Similarity=0.435  Sum_probs=30.4

Q ss_pred             EecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      +...++.+.+.||+|+||.||++.... +..||+|.++.
T Consensus        17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~   55 (353)
T 2i0e_A           17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKK   55 (353)
T ss_dssp             --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEH
T ss_pred             CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence            344577788899999999999999864 57899999853

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=96.94  E-value=0.0012  Score=44.67  Aligned_cols=35  Identities=23%  Similarity=0.295  Sum_probs=29.2

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++.... +..||+|.++.
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   44 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNN   44 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECG
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecc
Confidence            456677899999999999999854 67999999864

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=96.93  E-value=0.00062  Score=45.74  Aligned_cols=43  Identities=42%  Similarity=0.635  Sum_probs=32.6

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCC----CCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~~   88 (93)
                      ..+.++...+.+.+.||+|+||.||+|.+..    +..||+|.++..
T Consensus        27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~   73 (313)
T 3brb_A           27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLD   73 (313)
T ss_dssp             TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---
T ss_pred             HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecc
Confidence            4577888889999999999999999998642    347999998643

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=96.93  E-value=0.00087  Score=50.25  Aligned_cols=42  Identities=38%  Similarity=0.574  Sum_probs=32.2

Q ss_pred             ceeEecCCceeec-eEeeecccEEEEEEeC---CCCeEEEEEecCC
Q psy12538         47 QWEIDRNSLKFVR-KLGSGQFGEVWEGLWN---NTTPVAIKTLKMG   88 (93)
Q Consensus        47 ~~ei~~~~~~~~~-~iG~G~fG~V~~g~~~---~~~~vavK~l~~~   88 (93)
                      .|++++..+.+.. .||+|+||.||+|.+.   .+..||||.++..
T Consensus       362 ~~~~~~~~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~  407 (635)
T 4fl3_A          362 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE  407 (635)
T ss_dssp             SSBCCGGGEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGG
T ss_pred             cccccchhccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccc
Confidence            4666766666654 7999999999999763   3468999998753

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=96.93  E-value=0.001  Score=47.23  Aligned_cols=40  Identities=15%  Similarity=0.281  Sum_probs=32.0

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      ..+...++.+.+.||+|+||.||+++.+. +..+|+|.++.
T Consensus        47 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k   87 (396)
T 4dc2_A           47 SSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKK   87 (396)
T ss_dssp             --CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEG
T ss_pred             cCCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEh
Confidence            44556678888999999999999999754 67899999864

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=96.92  E-value=0.0012  Score=43.80  Aligned_cols=38  Identities=32%  Similarity=0.615  Sum_probs=30.8

Q ss_pred             EecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +....+.+.+.||+|+||.||++... ++..||+|.+..
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   54 (287)
T 4f0f_A           16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLIL   54 (287)
T ss_dssp             CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCC
T ss_pred             hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeec
Confidence            33456777889999999999999974 567899999854

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=96.92  E-value=0.0014  Score=45.50  Aligned_cols=36  Identities=28%  Similarity=0.358  Sum_probs=30.1

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ...+.+.+.||+|+||.||+|... ++..||+|.++.
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~   89 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN   89 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec
Confidence            356777889999999999999875 467899999864

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=96.92  E-value=0.0019  Score=44.17  Aligned_cols=39  Identities=28%  Similarity=0.403  Sum_probs=32.2

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+-...+.+.+.||+|+||.||++... ++..||+|.++.
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~   70 (360)
T 3llt_A           31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN   70 (360)
T ss_dssp             CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS
T ss_pred             eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc
Confidence            444567888899999999999999974 467899999864

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=96.91  E-value=0.0012  Score=46.93  Aligned_cols=40  Identities=28%  Similarity=0.385  Sum_probs=32.1

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+...++.+.+.||+|+||.||++... .+..||+|.++.
T Consensus       143 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~  183 (446)
T 4ejn_A          143 HRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK  183 (446)
T ss_dssp             -CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEH
T ss_pred             cCCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEh
Confidence            4455567888899999999999999874 467999999853

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=96.91  E-value=0.0019  Score=43.52  Aligned_cols=36  Identities=25%  Similarity=0.294  Sum_probs=30.1

Q ss_pred             CCceeeceEeeecccEEEEEEe-CCCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~   88 (93)
                      ..+.+.+.||+|+||.||++.. .++..||+|.++..
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   48 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD   48 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTT
T ss_pred             CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCcc
Confidence            4567788999999999999996 45679999998654

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=96.90  E-value=0.00083  Score=46.39  Aligned_cols=38  Identities=21%  Similarity=0.323  Sum_probs=29.8

Q ss_pred             ecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecCC
Q psy12538         51 DRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMG   88 (93)
Q Consensus        51 ~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~~   88 (93)
                      ....+.+.+.||+|+||.||+|.+..      +..||+|.+...
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~   76 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSD   76 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETT
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeecc
Confidence            34577788899999999999998754      368999998654

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=96.90  E-value=0.0014  Score=45.10  Aligned_cols=35  Identities=23%  Similarity=0.389  Sum_probs=29.6

Q ss_pred             CCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      .++.+.+.||+|+||.||++.. ..+..||+|.+..
T Consensus        15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~   50 (328)
T 3fe3_A           15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDK   50 (328)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEG
T ss_pred             CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEh
Confidence            4577788999999999999997 4577999999864

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=96.87  E-value=0.002  Score=44.35  Aligned_cols=36  Identities=33%  Similarity=0.492  Sum_probs=30.2

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ...+.+.+.||+|+||.||++... ++..||+|.++.
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   72 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS   72 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec
Confidence            456778889999999999999864 467899999864

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=96.87  E-value=0.002  Score=43.78  Aligned_cols=34  Identities=26%  Similarity=0.299  Sum_probs=27.8

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +...+.||+|+||.||+|... ++..||||.++..
T Consensus        47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~   81 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLR   81 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETT
T ss_pred             hhccEEeccCCCeEEEEEEECCCCcEEEEEEEecc
Confidence            344568999999999999975 5789999998653

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=96.86  E-value=0.0021  Score=42.13  Aligned_cols=35  Identities=31%  Similarity=0.451  Sum_probs=29.3

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||++... ++..||+|.++..
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~   47 (289)
T 1x8b_A           12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP   47 (289)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC
T ss_pred             hhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccc
Confidence            4566789999999999999985 5679999998753

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=96.86  E-value=0.0013  Score=45.48  Aligned_cols=36  Identities=19%  Similarity=0.315  Sum_probs=30.1

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..++.+.+.||+|+||.||+++.+ .+..+|+|.++.
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~   44 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKK   44 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEG
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEh
Confidence            356777889999999999999985 367899999864

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=96.86  E-value=0.0021  Score=42.75  Aligned_cols=40  Identities=38%  Similarity=0.557  Sum_probs=30.4

Q ss_pred             eEecCCceeeceEeeecccEEEEEEe-----CCCCeEEEEEecCC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLW-----NNTTPVAIKTLKMG   88 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~-----~~~~~vavK~l~~~   88 (93)
                      .+....+.+.+.||+|+||.||++.+     ..+..||+|.++..
T Consensus        17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~   61 (302)
T 4e5w_A           17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE   61 (302)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--
T ss_pred             hhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccc
Confidence            34445677788999999999999995     24678999998643

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=96.86  E-value=0.0019  Score=43.73  Aligned_cols=39  Identities=36%  Similarity=0.534  Sum_probs=30.3

Q ss_pred             EecCCceeeceEeeecccEEEEEEeC-----CCCeEEEEEecCC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWN-----NTTPVAIKTLKMG   88 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~-----~~~~vavK~l~~~   88 (93)
                      +....+.+.+.||+|+||.||++.+.     .+..||+|.++..
T Consensus        28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~   71 (318)
T 3lxp_A           28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD   71 (318)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT
T ss_pred             ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc
Confidence            44444577789999999999999873     3578999998754

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=96.84  E-value=0.0016  Score=45.33  Aligned_cols=41  Identities=29%  Similarity=0.501  Sum_probs=27.4

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..|++. ..+.+.+.||+|+||.||++... .+..||+|.+..
T Consensus        19 ~~~~~~-~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~   60 (367)
T 1cm8_A           19 TAWEVR-AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYR   60 (367)
T ss_dssp             SEECCB-SSEEEEEEC------CEEEEEETTTCCEEEEEECSS
T ss_pred             ceeeec-ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCc
Confidence            456664 46788889999999999999974 467999999854

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=96.84  E-value=0.0016  Score=46.06  Aligned_cols=35  Identities=29%  Similarity=0.401  Sum_probs=29.0

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||+|... .+..||||.+...
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~   90 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD   90 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc
Confidence            4666789999999999999985 4679999998653

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=96.84  E-value=0.0017  Score=46.12  Aligned_cols=35  Identities=23%  Similarity=0.406  Sum_probs=29.4

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++... .+..||+|.++.
T Consensus        97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~  132 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN  132 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECS
T ss_pred             CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECC
Confidence            45677889999999999999874 467899999864

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=96.83  E-value=0.0012  Score=44.26  Aligned_cols=35  Identities=23%  Similarity=0.428  Sum_probs=28.4

Q ss_pred             cCCceeeceEeeecccEEEEEEe-CCCCeEEEEEec
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLK   86 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~   86 (93)
                      ...+.+.+.||+|+||.||++.. ..+..||+|.++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~   43 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR   43 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEe
Confidence            34677788999999999999996 346789999985

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=96.82  E-value=0.0026  Score=42.52  Aligned_cols=35  Identities=26%  Similarity=0.383  Sum_probs=28.8

Q ss_pred             CceeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||++.... +..||+|.+...
T Consensus         4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   39 (311)
T 4agu_A            4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLES   39 (311)
T ss_dssp             CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCC
T ss_pred             cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecc
Confidence            45667899999999999999854 678999988543

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=96.82  E-value=0.0022  Score=42.43  Aligned_cols=36  Identities=36%  Similarity=0.523  Sum_probs=29.9

Q ss_pred             CCceeeceEeeecccEEEEEEe-CCCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~   88 (93)
                      ..+.+.+.||+|+||.||+|.. ..+..||+|.+...
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   45 (296)
T 3uzp_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK   45 (296)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESC
T ss_pred             cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCC
Confidence            4677788999999999999996 45679999988643

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=96.80  E-value=0.0013  Score=46.78  Aligned_cols=41  Identities=27%  Similarity=0.524  Sum_probs=25.0

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..|++. ..+.+.+.||+|+||.||++... .+..||+|.+..
T Consensus        47 ~~~~~~-~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~   88 (458)
T 3rp9_A           47 SDWQIP-DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILR   88 (458)
T ss_dssp             SSCCSC-TTEEECCC-------CEEEEEECC--CEEEEEEECS
T ss_pred             CcCccC-CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEech
Confidence            346665 46888899999999999999864 467999999864

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=96.80  E-value=0.0015  Score=44.11  Aligned_cols=34  Identities=35%  Similarity=0.886  Sum_probs=29.0

Q ss_pred             CCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||+|.+. +..||+|.+..
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~   70 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFT   70 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEG
T ss_pred             cceEEEeEeecCCCeEEEEEEEC-CceEEEEEEec
Confidence            46777889999999999999987 46899999853

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=96.80  E-value=0.0017  Score=45.47  Aligned_cols=35  Identities=23%  Similarity=0.295  Sum_probs=29.2

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||+|.... +..||+|.++.
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~   44 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNN   44 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECG
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecc
Confidence            356667899999999999999854 67999999864

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=96.79  E-value=0.0027  Score=42.03  Aligned_cols=38  Identities=34%  Similarity=0.449  Sum_probs=31.0

Q ss_pred             EecCCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      +...++.+.+.||+|+||.||++.. ..+..||+|.+..
T Consensus         7 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   45 (298)
T 1csn_A            7 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPR   45 (298)
T ss_dssp             EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEEC
T ss_pred             ccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEecc
Confidence            3445677888999999999999996 4567999999864

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=96.79  E-value=0.0021  Score=44.36  Aligned_cols=35  Identities=26%  Similarity=0.356  Sum_probs=29.4

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++.... +..||+|.++.
T Consensus        53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~   88 (349)
T 2w4o_A           53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKK   88 (349)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC
T ss_pred             CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEecc
Confidence            456777899999999999999864 66899999865

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=96.79  E-value=0.0019  Score=44.20  Aligned_cols=36  Identities=33%  Similarity=0.420  Sum_probs=29.7

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..++.+.+.||+|+||.||+++.. ++..+|+|.++.
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~   41 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKK   41 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEH
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence            346777889999999999999975 467999999853

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=96.79  E-value=0.0024  Score=45.32  Aligned_cols=40  Identities=20%  Similarity=0.327  Sum_probs=32.3

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .|++. ..+.+.+.||+|+||.||++... .+..||||.++.
T Consensus        21 ~~~i~-~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~   61 (432)
T 3n9x_A           21 NVHVP-DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR   61 (432)
T ss_dssp             GCCCC-TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS
T ss_pred             cceec-CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCc
Confidence            35554 46778889999999999999975 367899999865

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=96.78  E-value=0.00074  Score=45.78  Aligned_cols=42  Identities=43%  Similarity=0.695  Sum_probs=31.9

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC------CCCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN------NTTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~------~~~~vavK~l~~   87 (93)
                      ..+++...++.+.+.||+|+||.||+|.+.      .+..||+|.+..
T Consensus        23 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~   70 (327)
T 2yfx_A           23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE   70 (327)
T ss_dssp             GSCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCS
T ss_pred             hcccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecc
Confidence            346778888999999999999999999853      255899999864

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=96.78  E-value=0.0019  Score=43.41  Aligned_cols=35  Identities=23%  Similarity=0.434  Sum_probs=28.8

Q ss_pred             CCceeeceEeeecccEEEEEEeC--CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN--NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~--~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++...  ++..||+|.++.
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~   47 (326)
T 1blx_A           11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV   47 (326)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEE
T ss_pred             hceeeeeeecccccEEEEEEEecCCCCEEEEEEEecc
Confidence            45677789999999999999973  467899998853

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=96.76  E-value=0.0022  Score=42.10  Aligned_cols=36  Identities=31%  Similarity=0.368  Sum_probs=29.9

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ...+.+.+.||+|+||.||++... .+..||+|.+..
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   46 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNR   46 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEH
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEecc
Confidence            346777889999999999999975 467999999853

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=96.76  E-value=0.0039  Score=42.65  Aligned_cols=39  Identities=36%  Similarity=0.475  Sum_probs=31.7

Q ss_pred             eEecCCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      .+....+.+.+.||+|+||.||++.. .++..||+|.+..
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   54 (373)
T 1q8y_A           15 PYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG   54 (373)
T ss_dssp             EETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS
T ss_pred             cccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC
Confidence            34455777888999999999999996 4467899999864

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=96.75  E-value=0.0022  Score=43.95  Aligned_cols=40  Identities=20%  Similarity=0.336  Sum_probs=32.3

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ++...++.+.+.||+|+||.||++... .+..||+|.+...
T Consensus        29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~   69 (360)
T 3eqc_A           29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE   69 (360)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC
T ss_pred             ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc
Confidence            444567777889999999999999985 4678999998653

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=96.74  E-value=0.0024  Score=44.10  Aligned_cols=34  Identities=26%  Similarity=0.387  Sum_probs=28.6

Q ss_pred             CCceeeceEeeecccEEEEEEe-CCCCeEEEEEec
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLK   86 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~   86 (93)
                      ..+.+.+.||+|+||.||++.. ..+..||+|.+.
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~   43 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFIS   43 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEe
Confidence            3567788999999999999997 456799999875

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=96.74  E-value=0.0012  Score=43.71  Aligned_cols=40  Identities=30%  Similarity=0.547  Sum_probs=31.4

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCC-C-------CeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN-T-------TPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~-------~~vavK~l~~   87 (93)
                      +++...++.+.+.||+|+||.||++.... +       ..||+|.++.
T Consensus         3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~   50 (289)
T 4fvq_A            3 HKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDK   50 (289)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECG
T ss_pred             EEechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccc
Confidence            34566778888999999999999998643 1       3689999854

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=96.73  E-value=0.0029  Score=44.12  Aligned_cols=35  Identities=29%  Similarity=0.193  Sum_probs=29.2

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||++... ++..+|+|.++..
T Consensus        13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~   48 (361)
T 2yab_A           13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKR   48 (361)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBC
T ss_pred             ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEcc
Confidence            4667789999999999999975 4678999998653

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=96.73  E-value=0.0019  Score=44.96  Aligned_cols=41  Identities=27%  Similarity=0.486  Sum_probs=30.1

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      ..|++. ..+.+.+.||+|+||.||+|.. ..+..||+|.+..
T Consensus        23 ~~~~~~-~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~   64 (367)
T 2fst_X           23 TIWEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR   64 (367)
T ss_dssp             EEEEEE-TTEEEEEECC----CCEEEEEETTTTEEEEEEECSS
T ss_pred             cccCCC-CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCc
Confidence            458887 5788889999999999999986 4467899999864

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=96.73  E-value=0.0027  Score=43.24  Aligned_cols=35  Identities=26%  Similarity=0.412  Sum_probs=29.4

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .++.+.+.||+|+||.||++... .+..||+|.++.
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   46 (353)
T 2b9h_A           11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP   46 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC
T ss_pred             cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecc
Confidence            45677889999999999999975 467899999864

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=96.73  E-value=0.0022  Score=43.95  Aligned_cols=37  Identities=11%  Similarity=0.029  Sum_probs=29.3

Q ss_pred             cCCceeeceEeeecccEEEEEEeCC---------CCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNN---------TTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~---------~~~vavK~l~~~   88 (93)
                      ...+.+.+.||+|+||.||++....         +..||+|.+...
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~   86 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD   86 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc
Confidence            3577788899999999999999753         678999998643

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=96.72  E-value=0.0024  Score=45.22  Aligned_cols=35  Identities=29%  Similarity=0.393  Sum_probs=28.9

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||+|.... +..||+|.+..
T Consensus       135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~  170 (419)
T 3i6u_A          135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISK  170 (419)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEG
T ss_pred             ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEe
Confidence            456677889999999999998754 67999999854

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=96.71  E-value=0.0029  Score=41.72  Aligned_cols=35  Identities=20%  Similarity=0.317  Sum_probs=28.9

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .++.+.+.||+|+||.||++... .+..||+|.+..
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   41 (284)
T 3kk8_A            6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINT   41 (284)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEG
T ss_pred             hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeec
Confidence            35667789999999999999975 367899999854

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=96.71  E-value=0.0033  Score=42.16  Aligned_cols=36  Identities=33%  Similarity=0.462  Sum_probs=29.5

Q ss_pred             cCCceeeceEeeecccEEEEEEe-C-CCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLW-N-NTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~-~-~~~~vavK~l~~   87 (93)
                      ...+.+.+.||+|+||.||++.. . ++..||+|.++.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~   50 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN   50 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec
Confidence            34677788999999999999986 2 467899999864

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=96.71  E-value=0.0039  Score=41.92  Aligned_cols=39  Identities=23%  Similarity=0.432  Sum_probs=31.4

Q ss_pred             EecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .....+.+.+.||+|+||.||+|... .+..||+|.+...
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~   60 (326)
T 2x7f_A           21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT   60 (326)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC
Confidence            34456777889999999999999973 5678999998643

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=96.71  E-value=0.0014  Score=44.68  Aligned_cols=37  Identities=30%  Similarity=0.371  Sum_probs=20.7

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ...+.+.+.||+|+||.||++... ++..||+|.+...
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   59 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD   59 (360)
T ss_dssp             HTTEEEC----------CEEEEETTTCCEEEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC
Confidence            456777889999999999999975 4678999988543

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=96.70  E-value=0.0034  Score=41.26  Aligned_cols=36  Identities=17%  Similarity=0.338  Sum_probs=29.5

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +++.+.+.||+|+||.||++... ++..|++|.++..
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~   42 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYG   42 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECT
T ss_pred             hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcc
Confidence            35667789999999999999975 4678999998654

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=96.70  E-value=0.0024  Score=43.22  Aligned_cols=39  Identities=33%  Similarity=0.574  Sum_probs=31.0

Q ss_pred             EecCCceeeceEeeecccEEEEEEe-----CCCCeEEEEEecCC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLW-----NNTTPVAIKTLKMG   88 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~-----~~~~~vavK~l~~~   88 (93)
                      +....+.+.+.||+|+||.||++.+     ..+..||+|.+...
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~   63 (327)
T 3lxl_A           20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS   63 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC
T ss_pred             hchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC
Confidence            3445677788999999999999986     23678999998654

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=96.68  E-value=0.0032  Score=42.72  Aligned_cols=37  Identities=38%  Similarity=0.724  Sum_probs=28.0

Q ss_pred             ecCCceeeceEeeecccEEEEEEeCC-CC----eEEEEEecC
Q psy12538         51 DRNSLKFVRKLGSGQFGEVWEGLWNN-TT----PVAIKTLKM   87 (93)
Q Consensus        51 ~~~~~~~~~~iG~G~fG~V~~g~~~~-~~----~vavK~l~~   87 (93)
                      ....+.+.+.||+|+||.||+|.+.. +.    .|++|.+..
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~   52 (325)
T 3kex_A           11 KETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIED   52 (325)
T ss_dssp             CTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECC
T ss_pred             CHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccc
Confidence            34567778899999999999999743 22    378888754

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=96.67  E-value=0.0026  Score=42.18  Aligned_cols=41  Identities=29%  Similarity=0.447  Sum_probs=29.2

Q ss_pred             ceeEecCCcee--eceEeeecccEEEEEEeCC----CCeEEEEEecC
Q psy12538         47 QWEIDRNSLKF--VRKLGSGQFGEVWEGLWNN----TTPVAIKTLKM   87 (93)
Q Consensus        47 ~~ei~~~~~~~--~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~   87 (93)
                      ++.++...+.+  .+.||+|+||.||+|.+..    ...+|+|.++.
T Consensus        13 ~~~i~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~   59 (298)
T 3pls_A           13 DVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR   59 (298)
T ss_dssp             GGBCCGGGEEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred             heEccccceEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccc
Confidence            34555554443  4789999999999998632    23689998864

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=96.67  E-value=0.003  Score=43.81  Aligned_cols=35  Identities=14%  Similarity=0.154  Sum_probs=29.0

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||++... ++..||||.+...
T Consensus        95 ~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~  130 (365)
T 2y7j_A           95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVT  130 (365)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETT
T ss_pred             hcccceEEecCCCEEEEEEEECCCCcEEEEEEEEcc
Confidence            4556689999999999999985 5789999998654

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=96.66  E-value=0.0044  Score=41.47  Aligned_cols=35  Identities=31%  Similarity=0.376  Sum_probs=28.9

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++... .+..||+|.+..
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   46 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFI   46 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEEC
T ss_pred             ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEecc
Confidence            45677889999999999999864 467899999854

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=96.65  E-value=0.0031  Score=41.89  Aligned_cols=35  Identities=26%  Similarity=0.543  Sum_probs=28.1

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +++.+.+.||+|+||.||++... .+..||+|.++.
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   38 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL   38 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeec
Confidence            35667789999999999999975 467899999864

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=96.65  E-value=0.0029  Score=43.02  Aligned_cols=37  Identities=30%  Similarity=0.600  Sum_probs=30.1

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ...+.+.+.||+|+||.||++... .+..||+|.++..
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~   70 (329)
T 3gbz_A           33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLE   70 (329)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCC
T ss_pred             hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccc
Confidence            346777889999999999999864 4678999998643

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=96.65  E-value=0.0027  Score=42.69  Aligned_cols=35  Identities=23%  Similarity=0.422  Sum_probs=28.5

Q ss_pred             CCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++.. ..+..||+|.+..
T Consensus        20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   55 (297)
T 3fxz_A           20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL   55 (297)
T ss_dssp             GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEG
T ss_pred             hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeec
Confidence            3566678999999999999986 4467899999853

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=96.64  E-value=0.0041  Score=41.50  Aligned_cols=37  Identities=35%  Similarity=0.627  Sum_probs=29.8

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ...+.+.+.||+|+||.||+|... .+..||+|.++..
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~   58 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE   58 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETT
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccc
Confidence            345667789999999999999864 4678999998653

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=96.64  E-value=0.0028  Score=41.81  Aligned_cols=34  Identities=29%  Similarity=0.453  Sum_probs=28.4

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-CCeEEEEEec
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLK   86 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~   86 (93)
                      .++.+.+.||+|+||.||++.... +..||+|.+.
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~   43 (279)
T 3fdn_A            9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF   43 (279)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred             ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEe
Confidence            467778899999999999998754 5689999874

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=96.64  E-value=0.0023  Score=44.35  Aligned_cols=37  Identities=30%  Similarity=0.446  Sum_probs=30.5

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ...+.+.+.||+|+||.||++... .+..||+|.+...
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~   56 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG   56 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESS
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecC
Confidence            345677889999999999999975 4678999998653

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=96.63  E-value=0.0028  Score=44.44  Aligned_cols=35  Identities=26%  Similarity=0.411  Sum_probs=28.6

Q ss_pred             CCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++.......+|+|++..
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~   74 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ   74 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEEC
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEec
Confidence            35677889999999999999986656688888754

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=96.63  E-value=0.0022  Score=43.52  Aligned_cols=36  Identities=33%  Similarity=0.442  Sum_probs=28.9

Q ss_pred             CCceeeceEeeecccEEEEEEe-CCCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~   88 (93)
                      .++.+.+.||+|+||.||+|.. ..+..||+|.+...
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   45 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMK   45 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETT
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccc
Confidence            5677788999999999999996 45679999998643

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=96.62  E-value=0.0033  Score=42.05  Aligned_cols=35  Identities=31%  Similarity=0.661  Sum_probs=27.3

Q ss_pred             CCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      .++.+.+.||+|+||.||++.. .++..||+|.++.
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~   67 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQI   67 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECT
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeeh
Confidence            4567788999999999999996 3567899999864

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=96.62  E-value=0.0052  Score=40.61  Aligned_cols=41  Identities=24%  Similarity=0.325  Sum_probs=30.5

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +......+.....||+|+||.||+|... ++..||+|.++..
T Consensus        17 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~   58 (295)
T 2clq_A           17 YDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER   58 (295)
T ss_dssp             EEECBCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC
T ss_pred             ccccccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC
Confidence            4444444444568999999999999974 4678999998653

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=96.62  E-value=0.0036  Score=43.22  Aligned_cols=36  Identities=11%  Similarity=0.279  Sum_probs=29.5

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ..+.+.+.||+|+||.||++... .+..+|+|.++..
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~   58 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKS   58 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETT
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcc
Confidence            34666789999999999999975 4678999999654

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=96.61  E-value=0.0034  Score=41.31  Aligned_cols=35  Identities=29%  Similarity=0.276  Sum_probs=29.0

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||++... .+..+|+|.++..
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~   41 (283)
T 3bhy_A            6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKR   41 (283)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBC
T ss_pred             hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhc
Confidence            4566789999999999999985 4679999998653

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=96.61  E-value=0.0023  Score=43.44  Aligned_cols=35  Identities=20%  Similarity=0.299  Sum_probs=30.1

Q ss_pred             cCCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      ..++.+.+.||+|+||.||++.. .+..||+|.+..
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~   64 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEK   64 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEH
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeec
Confidence            35778888999999999999998 668999999853

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=96.60  E-value=0.0016  Score=49.12  Aligned_cols=39  Identities=28%  Similarity=0.428  Sum_probs=30.6

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .+...++.+.+.||+|+||.||++.... +..||+|.++.
T Consensus       337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~  376 (674)
T 3pfq_A          337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKK  376 (674)
T ss_dssp             ---CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEH
T ss_pred             cccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEec
Confidence            4455678888999999999999999754 56899999863

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=96.60  E-value=0.0018  Score=43.88  Aligned_cols=36  Identities=33%  Similarity=0.603  Sum_probs=17.9

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ..+.+.+.||+|+||.||+|... ++..||+|.++..
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~   41 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLD   41 (317)
T ss_dssp             --------------CEEEEEECSSSCCEEEEEEEECC
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecc
Confidence            34566788999999999999874 4678999998643

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=96.60  E-value=0.0033  Score=41.51  Aligned_cols=35  Identities=37%  Similarity=0.548  Sum_probs=27.7

Q ss_pred             CCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++.. ..+..||+|.+..
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   44 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECV   44 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC
T ss_pred             CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecc
Confidence            4567788999999999999996 4567899998643

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=96.60  E-value=0.0026  Score=42.95  Aligned_cols=34  Identities=32%  Similarity=0.388  Sum_probs=28.3

Q ss_pred             CceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||++.... +..||+|.+..
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   45 (322)
T 2ycf_A           11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISK   45 (322)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC
T ss_pred             ceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeeh
Confidence            45667899999999999999753 67899999854

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=96.59  E-value=0.0034  Score=41.28  Aligned_cols=33  Identities=30%  Similarity=0.422  Sum_probs=27.9

Q ss_pred             CceeeceEeeecccEEEEEEe-CCCCeEEEEEec
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLK   86 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~   86 (93)
                      ++.+.+.||+|+||.||++.. ..+..||+|.+.
T Consensus        12 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~   45 (278)
T 3cok_A           12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMID   45 (278)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred             cceeeeeecCCCceEEEEEEEccCCceEEEEEee
Confidence            466678999999999999997 456789999985

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=96.58  E-value=0.0028  Score=42.96  Aligned_cols=41  Identities=32%  Similarity=0.543  Sum_probs=32.0

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeC-----CCCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWN-----NTTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~-----~~~~vavK~l~~~   88 (93)
                      ..+....+.+.+.||+|+||.||++.+.     .+..||+|.+...
T Consensus        36 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~   81 (326)
T 2w1i_A           36 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS   81 (326)
T ss_dssp             -CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC
T ss_pred             cccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC
Confidence            3455567778889999999999999852     4678999998653

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=96.57  E-value=0.0021  Score=48.29  Aligned_cols=43  Identities=40%  Similarity=0.684  Sum_probs=34.8

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCC----CCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~~   88 (93)
                      ..|++....+.+.+.||+|+||.||+|.+..    ...||+|.++..
T Consensus       383 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~  429 (656)
T 2j0j_A          383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC  429 (656)
T ss_dssp             GGTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST
T ss_pred             cccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc
Confidence            4577888888899999999999999999743    346899988653

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=96.57  E-value=0.0041  Score=41.23  Aligned_cols=36  Identities=17%  Similarity=0.191  Sum_probs=29.8

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .++.+.+.||+|+||.||++... .+..||+|.++..
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   53 (298)
T 1phk_A           17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVT   53 (298)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETT
T ss_pred             hccceeeeecCCCceEEEEEEEcCcCceEEEEEEecc
Confidence            45667789999999999999985 4678999998653

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=96.57  E-value=0.0044  Score=41.88  Aligned_cols=35  Identities=29%  Similarity=0.193  Sum_probs=28.9

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||++... ++..||+|.++..
T Consensus        13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   48 (321)
T 2a2a_A           13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKR   48 (321)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBC
T ss_pred             cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecc
Confidence            4566789999999999999975 4678999998653

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=96.57  E-value=0.0033  Score=43.54  Aligned_cols=36  Identities=25%  Similarity=0.383  Sum_probs=29.7

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..++.+.+.||+|+||.||++... ++..||+|.++.
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~   76 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK   76 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEH
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEh
Confidence            346777889999999999999975 467999999853

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=96.56  E-value=0.0028  Score=41.65  Aligned_cols=35  Identities=29%  Similarity=0.518  Sum_probs=29.1

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||++... ++..||+|.++..
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   47 (284)
T 2a19_B           12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN   47 (284)
T ss_dssp             HEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC
T ss_pred             ccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc
Confidence            4566788999999999999985 5679999998654

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=96.55  E-value=0.0022  Score=43.80  Aligned_cols=35  Identities=31%  Similarity=0.547  Sum_probs=29.1

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++... ++..||+|.+..
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   52 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLM   52 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCC
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEec
Confidence            45667789999999999999974 567999998854

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=96.54  E-value=0.0036  Score=43.14  Aligned_cols=33  Identities=18%  Similarity=0.322  Sum_probs=27.9

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      .+.+.+.||+|+||.||++... ++..||+|.++
T Consensus        25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~   58 (351)
T 3c0i_A           25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVD   58 (351)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred             ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEE
Confidence            4667789999999999999874 46799999985

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=96.54  E-value=0.0029  Score=42.78  Aligned_cols=34  Identities=35%  Similarity=0.845  Sum_probs=29.0

Q ss_pred             CCceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||+|.+. +..||+|.+..
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~   75 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSS   75 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECG
T ss_pred             ccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCc
Confidence            46777889999999999999986 46899999854

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=96.52  E-value=0.0042  Score=43.10  Aligned_cols=36  Identities=19%  Similarity=0.298  Sum_probs=29.6

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ..+.+.+.||+|+||.||++... .+..||+|.++..
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~   65 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK   65 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETT
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcc
Confidence            35667789999999999999975 4679999998653

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=96.51  E-value=0.0046  Score=41.76  Aligned_cols=36  Identities=33%  Similarity=0.536  Sum_probs=29.4

Q ss_pred             cCCceeeceEeeecccEEEEEEeCC--CCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWNN--TTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~~--~~~vavK~l~~   87 (93)
                      ...+.+.+.||+|+||.||++....  +..||+|.++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~   55 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN   55 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc
Confidence            3567788899999999999999743  36899999864

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=96.51  E-value=0.003  Score=41.35  Aligned_cols=34  Identities=32%  Similarity=0.544  Sum_probs=28.2

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++... ++..||+|.++.
T Consensus         8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   42 (276)
T 2yex_A            8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM   42 (276)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEG
T ss_pred             ceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeee
Confidence            4566779999999999999975 467899999854

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=96.51  E-value=0.0025  Score=44.28  Aligned_cols=34  Identities=32%  Similarity=0.608  Sum_probs=21.4

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||++... .+..||+|.+..
T Consensus        10 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~   44 (388)
T 3oz6_A           10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFD   44 (388)
T ss_dssp             TEEEEEC-------CEEEEEETTTCCEEEEEEECC
T ss_pred             ceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecc
Confidence            5667789999999999999864 467999999854

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=96.50  E-value=0.0043  Score=42.44  Aligned_cols=34  Identities=26%  Similarity=0.305  Sum_probs=27.4

Q ss_pred             Ccee-eceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKF-VRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~-~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+ .+.||+|+||.||++... ++..||+|.+..
T Consensus        29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~   64 (336)
T 3fhr_A           29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYD   64 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEES
T ss_pred             eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecC
Confidence            4555 456999999999999975 467999999854

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=96.50  E-value=0.0046  Score=42.62  Aligned_cols=35  Identities=29%  Similarity=0.377  Sum_probs=29.3

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++... ++..||+|.+..
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~   62 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP   62 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecc
Confidence            46777889999999999999864 467899999864

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=96.50  E-value=0.0049  Score=41.97  Aligned_cols=36  Identities=22%  Similarity=0.328  Sum_probs=29.1

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ..+.+.+.||+|+||.||++... ++..+|+|.++..
T Consensus         5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~   41 (321)
T 1tki_A            5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK   41 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC
T ss_pred             hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC
Confidence            35667789999999999999975 3678999988643

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=96.50  E-value=0.0041  Score=41.37  Aligned_cols=34  Identities=32%  Similarity=0.335  Sum_probs=28.3

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||++... .+..+|+|.++.
T Consensus         6 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~   40 (305)
T 2wtk_C            6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKK   40 (305)
T ss_dssp             CBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECH
T ss_pred             ceeEeeEEecCCCeEEEEEEECCCCcEEEEEEecc
Confidence            5667789999999999999974 467899999853

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=96.49  E-value=0.0049  Score=42.67  Aligned_cols=35  Identities=29%  Similarity=0.296  Sum_probs=29.3

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++... .+..||+|.+..
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~   60 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR   60 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEC
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCceEEEEEecc
Confidence            46777889999999999999864 467899999864

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=96.49  E-value=0.0037  Score=41.43  Aligned_cols=34  Identities=38%  Similarity=0.489  Sum_probs=27.4

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||+|... .+..|++|.+..
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~   61 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQD   61 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEG
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecc
Confidence            3556778999999999999974 466889998854

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=96.49  E-value=0.004  Score=44.41  Aligned_cols=42  Identities=19%  Similarity=0.075  Sum_probs=32.2

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      .+.+....+...+.||+|+||.||......+..||||.+...
T Consensus        18 ~~~i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~   59 (432)
T 3p23_A           18 VVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPE   59 (432)
T ss_dssp             CEEETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTT
T ss_pred             cEEEccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHH
Confidence            467777778888999999999965444445579999998654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=96.48  E-value=0.0023  Score=43.43  Aligned_cols=39  Identities=21%  Similarity=0.225  Sum_probs=31.2

Q ss_pred             EecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      .....+.+.+.||+|+||.||++.... +..||+|.+...
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   61 (331)
T 4aaa_A           22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLES   61 (331)
T ss_dssp             BCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESC
T ss_pred             hhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecC
Confidence            334567778899999999999999754 678999998543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=96.48  E-value=0.005  Score=41.93  Aligned_cols=35  Identities=29%  Similarity=0.181  Sum_probs=28.7

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||++... ++..||+|.++..
T Consensus        12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~   47 (326)
T 2y0a_A           12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKR   47 (326)
T ss_dssp             HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBC
T ss_pred             ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEcc
Confidence            4566788999999999999975 4678999998653

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=96.47  E-value=0.004  Score=44.79  Aligned_cols=35  Identities=29%  Similarity=0.297  Sum_probs=29.1

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++... .+..||+|.+..
T Consensus        62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~   97 (464)
T 3ttj_A           62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR   97 (464)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEES
T ss_pred             CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECc
Confidence            45677789999999999999864 467899999864

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=96.46  E-value=0.0038  Score=46.66  Aligned_cols=37  Identities=32%  Similarity=0.460  Sum_probs=31.1

Q ss_pred             EecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      +...++.+.+.||+|+||.||++... .+..||+|.+.
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~  218 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLE  218 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEE
Confidence            45567778889999999999999975 46799999985

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=96.46  E-value=0.0037  Score=42.80  Aligned_cols=35  Identities=31%  Similarity=0.450  Sum_probs=26.4

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++... ++..||+|.++.
T Consensus        10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~   45 (346)
T 1ua2_A           10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKL   45 (346)
T ss_dssp             ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC--
T ss_pred             cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEec
Confidence            35667789999999999999975 467899999864

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=96.44  E-value=0.0039  Score=45.36  Aligned_cols=35  Identities=40%  Similarity=0.660  Sum_probs=29.2

Q ss_pred             CCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||+|.. ..+..||||.++.
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~   42 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV   42 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEET
T ss_pred             CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecc
Confidence            4577788999999999999997 4467999998764

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=96.44  E-value=0.0046  Score=42.89  Aligned_cols=40  Identities=10%  Similarity=0.263  Sum_probs=32.8

Q ss_pred             eeEecCCceeeceEeee--cccEEEEEEeC-CCCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSG--QFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G--~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +......+.+.+.||+|  +||.||+++.. ++..||+|.++.
T Consensus        20 ~~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~   62 (389)
T 3gni_B           20 FLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINL   62 (389)
T ss_dssp             CCCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEG
T ss_pred             ccCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecc
Confidence            44455677788899999  99999999985 477999999864

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=96.43  E-value=0.004  Score=42.30  Aligned_cols=38  Identities=45%  Similarity=0.845  Sum_probs=27.1

Q ss_pred             EecCCceeeceEeeecccEEEEEEeCC-C----CeEEEEEecC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWNN-T----TPVAIKTLKM   87 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~~-~----~~vavK~l~~   87 (93)
                      +...++.+.+.||+|+||.||+|.+.. +    ..|++|.++.
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~   54 (327)
T 3poz_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE   54 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--
T ss_pred             cCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccc
Confidence            334567778899999999999999743 2    2468888754

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=96.42  E-value=0.0067  Score=42.30  Aligned_cols=31  Identities=29%  Similarity=0.386  Sum_probs=20.9

Q ss_pred             eceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         58 VRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        58 ~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.||+|+||.||++... ++..||+|.++..
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~  125 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTR  125 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECC
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEccc
Confidence            457999999999999874 4679999998653

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=96.40  E-value=0.0043  Score=41.20  Aligned_cols=35  Identities=26%  Similarity=0.458  Sum_probs=28.4

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++.... +..+++|.+..
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~   54 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIET   54 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-
T ss_pred             cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecC
Confidence            456667889999999999999853 67899998864

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=96.39  E-value=0.0044  Score=40.97  Aligned_cols=35  Identities=31%  Similarity=0.451  Sum_probs=28.8

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      ..++.+.+.||+|+||.||++... ++..||+|.+.
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~   48 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLF   48 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEc
Confidence            346777889999999999999975 45689999874

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=96.39  E-value=0.0041  Score=41.60  Aligned_cols=40  Identities=25%  Similarity=0.506  Sum_probs=25.6

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      ......+.+.+.||+|+||.||+|.... +..||+|.+...
T Consensus        25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~   65 (314)
T 3com_A           25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE   65 (314)
T ss_dssp             -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT
T ss_pred             hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch
Confidence            3445567778899999999999999753 678999998653

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=96.39  E-value=0.0031  Score=42.03  Aligned_cols=36  Identities=28%  Similarity=0.382  Sum_probs=24.9

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-CCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~   88 (93)
                      ..+.+.+.||+|+||.||++.... +..||+|.+...
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~   47 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT   47 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC
Confidence            467778899999999999999864 678999988643

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=96.38  E-value=0.0039  Score=41.13  Aligned_cols=34  Identities=26%  Similarity=0.420  Sum_probs=28.0

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||++... ++..||+|.++.
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   41 (303)
T 1zy4_A            7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH   41 (303)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE
T ss_pred             cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec
Confidence            4566788999999999999974 567899998853

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=96.38  E-value=0.0059  Score=42.16  Aligned_cols=35  Identities=31%  Similarity=0.471  Sum_probs=28.4

Q ss_pred             CceeeceEeeecccEEEEEEe-CCCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~   88 (93)
                      .+...+.||+|+||.||+|.. .++..||+|.+...
T Consensus        55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~   90 (348)
T 1u5q_A           55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYS   90 (348)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESC
T ss_pred             heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccc
Confidence            355667899999999999996 45678999998643

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=96.38  E-value=0.0053  Score=41.58  Aligned_cols=34  Identities=24%  Similarity=0.376  Sum_probs=28.1

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      ..+.+.+.||+|+||.||++... .+..+|+|.+.
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~   60 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMN   60 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred             hheeecceeeecCCeEEEEEEECCCCceEEEeehh
Confidence            45667789999999999999974 46689999875

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=96.37  E-value=0.0041  Score=45.17  Aligned_cols=35  Identities=31%  Similarity=0.414  Sum_probs=29.5

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||+|... .+..||+|.++.
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~   51 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNR   51 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEH
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEh
Confidence            46777889999999999999975 567999999853

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=96.37  E-value=0.0057  Score=40.62  Aligned_cols=33  Identities=30%  Similarity=0.575  Sum_probs=25.3

Q ss_pred             ceeeceEeeecccEEEEEEeCC----CCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||+|.+..    ...+++|.++.
T Consensus        27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~   63 (298)
T 3f66_A           27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR   63 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETT
T ss_pred             hhhcceeeecCCceEEEEEEecCCCceeEEEEEeccc
Confidence            4556899999999999998643    23578998864

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=96.37  E-value=0.0056  Score=40.24  Aligned_cols=34  Identities=21%  Similarity=0.281  Sum_probs=27.9

Q ss_pred             CceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||++.... +..+++|.+..
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~   44 (277)
T 3f3z_A           10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK   44 (277)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEG
T ss_pred             hEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehh
Confidence            45667899999999999999754 56889998854

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=96.36  E-value=0.0046  Score=45.77  Aligned_cols=36  Identities=31%  Similarity=0.370  Sum_probs=29.9

Q ss_pred             ecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         51 DRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        51 ~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      ....+.+.+.||+|+||.||+++.. .+..||+|.+.
T Consensus       183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~  219 (543)
T 3c4z_A          183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLN  219 (543)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEE
Confidence            3456777789999999999999985 47799999985

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=96.36  E-value=0.0048  Score=44.53  Aligned_cols=36  Identities=42%  Similarity=0.451  Sum_probs=27.3

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ..+.+.+.||+|+||.||++... ++..+|+|.++..
T Consensus        36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~   72 (504)
T 3q5i_A           36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKS   72 (504)
T ss_dssp             GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC-
T ss_pred             cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhh
Confidence            45667789999999999999975 4678999998653

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=96.34  E-value=0.006  Score=40.52  Aligned_cols=35  Identities=37%  Similarity=0.443  Sum_probs=28.7

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++... .+..+|+|.+..
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~   57 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINK   57 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEG
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeec
Confidence            35667789999999999999974 467899999854

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=96.34  E-value=0.0056  Score=41.17  Aligned_cols=35  Identities=26%  Similarity=0.417  Sum_probs=29.4

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++... ++..||+|.++.
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~   69 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSE   69 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGG
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCc
Confidence            45777889999999999999975 467899999864

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=96.33  E-value=0.0068  Score=40.47  Aligned_cols=35  Identities=31%  Similarity=0.434  Sum_probs=29.0

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||++... ++..||+|.++..
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~   45 (304)
T 2jam_A           10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKS   45 (304)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC
T ss_pred             cceeeeeccCCCCceEEEEEECCCCCEEEEEEEecc
Confidence            4566789999999999999974 4678999998653

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=96.28  E-value=0.0033  Score=43.08  Aligned_cols=35  Identities=31%  Similarity=0.528  Sum_probs=28.8

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||++... .+..||+|.++..
T Consensus        25 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~   60 (335)
T 3dls_A           25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKE   60 (335)
T ss_dssp             HEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEEST
T ss_pred             ceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehh
Confidence            4566789999999999999864 4678999998654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=96.27  E-value=0.0062  Score=40.42  Aligned_cols=34  Identities=24%  Similarity=0.138  Sum_probs=27.7

Q ss_pred             CceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||++.... +..+|+|.+..
T Consensus        16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~   50 (294)
T 2rku_A           16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPK   50 (294)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEG
T ss_pred             ceEEEEEEeecCCEEEEEEEECCCCceEEEEEech
Confidence            45567899999999999999753 66889998754

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=96.27  E-value=0.0075  Score=42.45  Aligned_cols=35  Identities=23%  Similarity=0.346  Sum_probs=28.9

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++... ++..+|+|.+..
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~   86 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINT   86 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecc
Confidence            35667789999999999999975 467899998864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=96.26  E-value=0.0073  Score=40.00  Aligned_cols=35  Identities=29%  Similarity=0.398  Sum_probs=28.8

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++... .+..||+|.+..
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~   57 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINK   57 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEG
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecc
Confidence            35666789999999999999975 467899999854

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=96.24  E-value=0.0084  Score=42.86  Aligned_cols=35  Identities=31%  Similarity=0.341  Sum_probs=29.1

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++... .+..||+|.+..
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~   61 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISK   61 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEET
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEh
Confidence            45667789999999999999975 467999999854

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=96.22  E-value=0.0066  Score=41.34  Aligned_cols=35  Identities=23%  Similarity=0.137  Sum_probs=28.5

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-CCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~   87 (93)
                      ..+.+.+.||+|+||.||++.... +..+|+|.+..
T Consensus        41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~   76 (335)
T 2owb_A           41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPK   76 (335)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEG
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEech
Confidence            356677899999999999999754 56889998754

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=96.22  E-value=0.0025  Score=43.65  Aligned_cols=37  Identities=22%  Similarity=0.306  Sum_probs=24.4

Q ss_pred             cCCceeeceEeeecccEEEEEEeC----CCCeEEEEEecCC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN----NTTPVAIKTLKMG   88 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~----~~~~vavK~l~~~   88 (93)
                      ...+.+.+.||+|+||.||++...    ....+|+|.+...
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~   76 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQE   76 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecC
Confidence            456778889999999999999975    4568999988653

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=96.21  E-value=0.0081  Score=40.76  Aligned_cols=29  Identities=31%  Similarity=0.415  Sum_probs=25.1

Q ss_pred             ceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.||+|+||.||++... ++..||+|.++.
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~   64 (327)
T 3lm5_A           35 KELGRGKFAVVRQCISKSTGQEYAAKFLKK   64 (327)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEES
T ss_pred             ceeCCCCCeEEEEEEECCCCCEEEEEEEeh
Confidence            68999999999999975 467999999864

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=96.21  E-value=0.004  Score=43.60  Aligned_cols=31  Identities=23%  Similarity=0.423  Sum_probs=20.6

Q ss_pred             eceEeeecccEEEEEEeC---CCCeEEEEEecCC
Q psy12538         58 VRKLGSGQFGEVWEGLWN---NTTPVAIKTLKMG   88 (93)
Q Consensus        58 ~~~iG~G~fG~V~~g~~~---~~~~vavK~l~~~   88 (93)
                      .+.||+|+||.||++.+.   .+..||+|.++..
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~   59 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT   59 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSS
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC
Confidence            347999999999999975   3578999998653

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=96.13  E-value=0.0059  Score=40.71  Aligned_cols=29  Identities=45%  Similarity=0.710  Sum_probs=24.8

Q ss_pred             eceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         58 VRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        58 ~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      .+.||+|+||.||+|.+. +..||+|.+..
T Consensus        36 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~   64 (307)
T 2nru_A           36 GNKMGEGGFGVVYKGYVN-NTTVAVKKLAA   64 (307)
T ss_dssp             CCEEEECSSEEEEEEESS-SCEEEEEEECC
T ss_pred             CCccccCCCeEEEEEEEC-CceEEEEEEec
Confidence            478999999999999975 46899999854

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=96.12  E-value=0.0074  Score=43.29  Aligned_cols=34  Identities=29%  Similarity=0.424  Sum_probs=28.2

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      ..+.+.+.||+|+||.||++... .+..||+|.+.
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~   56 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVIN   56 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEE
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEe
Confidence            34566789999999999999975 46789999984

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=96.12  E-value=0.0086  Score=44.91  Aligned_cols=36  Identities=22%  Similarity=0.301  Sum_probs=30.1

Q ss_pred             cCCceeeceEeeecccEEEEEEeC--CCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN--NTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~--~~~~vavK~l~~   87 (93)
                      ...+.+.+.||+|+||.||++...  ++..||||.+..
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~  116 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVH  116 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCS
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCc
Confidence            456778889999999999999974  467899998854

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=96.11  E-value=0.011  Score=40.12  Aligned_cols=38  Identities=45%  Similarity=0.850  Sum_probs=27.9

Q ss_pred             EecCCceeeceEeeecccEEEEEEeCC-CC----eEEEEEecC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWNN-TT----PVAIKTLKM   87 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~~-~~----~vavK~l~~   87 (93)
                      +....+.+.+.||+|+||.||+|.+.. +.    .|++|.+..
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~   54 (327)
T 3lzb_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE   54 (327)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECC
T ss_pred             cCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecc
Confidence            334567778899999999999999743 22    357887754

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=96.10  E-value=0.0051  Score=41.91  Aligned_cols=30  Identities=20%  Similarity=0.360  Sum_probs=25.3

Q ss_pred             eceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         58 VRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        58 ~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.||+|+||.||++... ++..||+|.+..
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~   46 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK   46 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEG
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEECh
Confidence            357999999999999975 467899999864

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=96.10  E-value=0.0096  Score=41.88  Aligned_cols=29  Identities=28%  Similarity=0.312  Sum_probs=24.8

Q ss_pred             ceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.||+|+||.||++... .+..||+|.++.
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~   97 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD   97 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCc
Confidence            57999999999999975 467899999853

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=96.09  E-value=0.011  Score=39.52  Aligned_cols=29  Identities=28%  Similarity=0.312  Sum_probs=24.8

Q ss_pred             ceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         59 RKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        59 ~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.||+|+||.||++... .+..||+|.++.
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   53 (299)
T 3m2w_A           24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD   53 (299)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC
T ss_pred             cccccCCCeEEEEEEEcCCCcEEEEEEecc
Confidence            67999999999999974 467999999864

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=96.05  E-value=0.0081  Score=43.24  Aligned_cols=35  Identities=34%  Similarity=0.398  Sum_probs=25.6

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||++... .+..+|+|.++..
T Consensus        38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~   73 (494)
T 3lij_A           38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKT   73 (494)
T ss_dssp             HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-
T ss_pred             CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEecc
Confidence            4667789999999999999975 4678999998643

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=96.01  E-value=0.009  Score=39.94  Aligned_cols=31  Identities=19%  Similarity=0.206  Sum_probs=25.6

Q ss_pred             eceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         58 VRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        58 ~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.||+|+||.||++... .+..||+|.++..
T Consensus        18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   49 (316)
T 2ac3_A           18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQ   49 (316)
T ss_dssp             CCCCCCCSSEEEEEEECSSSCCEEEEEEEECC
T ss_pred             CceecCCceEEEEEEEEcCCCcEEEEEEEeeC
Confidence            357999999999999863 4679999998653

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=96.00  E-value=0.0064  Score=42.46  Aligned_cols=40  Identities=30%  Similarity=0.490  Sum_probs=28.5

Q ss_pred             eeEecCC--ceeeceEeeecccEEEEEEeCC----CCeEEEEEecC
Q psy12538         48 WEIDRNS--LKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~--~~~~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~   87 (93)
                      +.++...  +.+.+.||+|+||.||+|.+..    ...||+|.++.
T Consensus        82 ~~i~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~  127 (373)
T 3c1x_A           82 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR  127 (373)
T ss_dssp             TBCCSTTEEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCS
T ss_pred             cccChhhceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCC
Confidence            4444443  3456789999999999998732    23688998864

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=95.99  E-value=0.0068  Score=40.96  Aligned_cols=39  Identities=33%  Similarity=0.534  Sum_probs=29.9

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeCC-CC--eEEEEEecC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWNN-TT--PVAIKTLKM   87 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~--~vavK~l~~   87 (93)
                      .++..++.+.+.||+|+||.||++.... +.  .+++|.++.
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~   62 (327)
T 1fvr_A           21 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE   62 (327)
T ss_dssp             BCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred             cccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeecc
Confidence            3555678888999999999999998743 33  458888864

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=95.92  E-value=0.0033  Score=41.47  Aligned_cols=41  Identities=39%  Similarity=0.680  Sum_probs=24.9

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCC--C--CeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN--T--TPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~--~--~~vavK~l~~~   88 (93)
                      ..+...++.+.+.||+|+||.||+|.+..  +  ..||+|.++..
T Consensus        13 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~   57 (291)
T 1u46_A           13 CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPD   57 (291)
T ss_dssp             EECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC----
T ss_pred             cccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccC
Confidence            34556678888899999999999998632  2  25899988643

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=95.81  E-value=0.01  Score=42.58  Aligned_cols=35  Identities=17%  Similarity=0.219  Sum_probs=26.6

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||++... .+..+|+|.+...
T Consensus        12 ~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~   47 (444)
T 3soa_A           12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTK   47 (444)
T ss_dssp             HEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESC
T ss_pred             CeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcc
Confidence            4566789999999999999864 4678999998653

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=95.71  E-value=0.015  Score=41.23  Aligned_cols=31  Identities=29%  Similarity=0.241  Sum_probs=24.5

Q ss_pred             eeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         57 FVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        57 ~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      ..+.||+|+||.||.+....+..||||.+..
T Consensus        19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~   49 (434)
T 2rio_A           19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLI   49 (434)
T ss_dssp             EEEEEEECSTTCEEEEEESSSSEEEEEEEEG
T ss_pred             ccCeEeeCCCeEEEEEEEECCeEEEEEEEcH
Confidence            3568999999999765555568999998854

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=92.42  E-value=0.017  Score=44.07  Aligned_cols=35  Identities=29%  Similarity=0.437  Sum_probs=27.4

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||++... ++..||+|.++..
T Consensus        15 rY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~   50 (676)
T 3qa8_A           15 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE   50 (676)
T ss_dssp             --CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC
T ss_pred             CeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc
Confidence            4566778999999999999874 4678999988653

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=92.23  E-value=0.11  Score=38.21  Aligned_cols=28  Identities=18%  Similarity=0.192  Sum_probs=16.9

Q ss_pred             eceEeeecccEEEEEEeCCCCeEEEEEec
Q psy12538         58 VRKLGSGQFGEVWEGLWNNTTPVAIKTLK   86 (93)
Q Consensus        58 ~~~iG~G~fG~V~~g~~~~~~~vavK~l~   86 (93)
                      .+.||+|+||.||++.+.+ ..+++|.+.
T Consensus       341 ~~~LG~G~fg~Vy~~~~~~-~~~~~k~~~  368 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSYLD-FDVIIKERV  368 (540)
T ss_dssp             -------CCEEEEEEECSS-CEEEEEEEC
T ss_pred             CCEEeeCCCEEEEEEEECC-CeEEEEEEe
Confidence            4689999999999997665 577888764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	93
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	6e-19
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	6e-16
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	7e-14
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	9e-13
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-12
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-12
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	8e-12
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	9e-12
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-11
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-11
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-11
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-11
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-10
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-10
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-09
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-09
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-08
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	4e-08
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-08
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	6e-08
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-07
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-07
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-07
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-07
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	7e-07
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	9e-07
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-06
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-06
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-06
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-06
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-06
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-06
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-06
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-06
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-06
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	6e-06
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	7e-06
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	7e-06
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	7e-06
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	8e-06
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	8e-06
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	9e-06
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	9e-06
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	9e-06
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-05
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-05
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-05
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-05
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-05
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-05
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-05
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-05
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-05
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-05
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-05
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-05
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-05
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-05
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-05
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	5e-05
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	6e-05
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-04
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-04

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.3 bits (187), Expect = 6e-19
 Identities = 34/58 (58%), Positives = 39/58 (67%), Gaps = 3/58 (5%)

Query: 34 KPVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
          KP T GL+   +D WEI R SL+   KLG G FGEVW G WN TT VAIKTLK G++ 
Sbjct: 1  KPQTQGLA---KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS 55

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.1 bits (166), Expect = 6e-16
 Identities = 26/47 (55%), Positives = 35/47 (74%)

Query: 45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
           D+WE+ R +LK V +LG+GQFGEVW G +N  T VA+K+LK GS+ 
Sbjct: 5  EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS 51

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.8 bits (152), Expect = 7e-14
 Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 1/47 (2%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          D+WE++R  +    KLG GQ+GEV+EG+W      VA+KTLK  +++
Sbjct: 10 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 56

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (144), Expect = 9e-13
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
          D WEI    +   +++GSG FG V++G W+    VA+K L + +  
Sbjct: 1  DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPT 44

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 2e-12
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 6/50 (12%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT------TPVAIKTLKMGS 89
          D+WE+ R  +   R+LG G FG V+EG+          T VAIKT+   +
Sbjct: 13 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 62

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.8 bits (139), Expect = 4e-12
 Identities = 21/42 (50%), Positives = 29/42 (69%)

Query: 50 IDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
          ID + L FV+++GSGQFG V  G W N   VAIKT++ G++ 
Sbjct: 2  IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS 43

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.8 bits (136), Expect = 8e-12
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 6/52 (11%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT------TPVAIKTLKMGSID 91
           +WE  R+ LK  + LG G FG+V E              VA+K LK G+  
Sbjct: 6  SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 57

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (136), Expect = 9e-12
 Identities = 20/42 (47%), Positives = 26/42 (61%)

Query: 50 IDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
          ID   L F+++LG+GQFG V  G W     VAIK +K GS+ 
Sbjct: 1  IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS 42

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 1e-11
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSI 90
          W ++   LK ++ +G G+FG+V  G +     VA+K +K  + 
Sbjct: 2  WALNMKELKLLQTIGKGEFGDVMLGDYRG-NKVAVKCIKNDAT 43

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 2e-11
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 6/50 (12%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLW------NNTTPVAIKTLKMGS 89
           +WE  RN L F + LG+G FG+V E         +    VA+K LK  +
Sbjct: 16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA 65

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 3e-11
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 8/54 (14%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT--------TPVAIKTLKMGSID 91
           +WE+ R+ L   + LG G FG+V                T VA+K LK  + +
Sbjct: 6  PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE 59

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (131), Expect = 4e-11
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNT----TPVAIKTLKMGSID 91
          +EI R  ++  R +G GQFG+V +G++ +       VAIKT K  + D
Sbjct: 2  YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD 49

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 2e-10
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT------TPVAIKTLKMGS 89
          +WE  R +L+F + LGSG FG+V                VA+K LK  +
Sbjct: 31 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA 79

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.5 bits (125), Expect = 3e-10
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 6/50 (12%)

Query: 46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT------TPVAIKTLKMGS 89
             E  RN++++VR +G G FG V++            T VA+K LK  +
Sbjct: 6  LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA 55

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 1e-09
 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 5/49 (10%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTT-----PVAIKTLKMGSID 91
           EI  + +   + +G+G+FGEV++G+   ++     PVAIKTLK G  +
Sbjct: 2  TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE 50

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.4 bits (117), Expect = 4e-09
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 5/57 (8%)

Query: 40 LSHSTRD-QWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT----TPVAIKTLKMGSID 91
           + + R+   EID + +K  + +G+G+FGEV  G           VAIKTLK G  +
Sbjct: 12 PNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTE 68

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 4e-08
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 3/42 (7%)

Query: 49 EIDRNSLKFVRKLGSGQFGEVWEGLWNNT---TPVAIKTLKM 87
           +D N +KF   +G G FG+V +            AIK +K 
Sbjct: 6  VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE 47

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (109), Expect = 4e-08
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)

Query: 50 IDRNSLKFVRKLGSGQFGEVWEGLWNNTT----PVAIKTLKMGSID 91
          I    L+ + KLG G FG V  G W+  +     VA+K LK   + 
Sbjct: 5  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS 50

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 4e-08
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%)

Query: 47 QWEIDRNSLKFV-RKLGSGQFGEVWEGLWNNT---TPVAIKTLKMGS 89
          +  + R++L     +LG G FG V +G++        VAIK LK G+
Sbjct: 2  KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT 48

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 6e-08
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          +  WE+ R   + ++ +GSG +G V   +   T   VAIK L      
Sbjct: 11 KTAWEV-RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQS 57

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 2e-07
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)

Query: 50 IDRNSLKFV-RKLGSGQFGEVWEGLWNNT---TPVAIKTLKMGSID 91
          +DR  L    ++LGSG FG V +G +        VA+K LK  + D
Sbjct: 3  LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND 48

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (104), Expect = 2e-07
 Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 2/48 (4%)

Query: 45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          +  WE+     + +  +GSG +G V       T   VA+K L      
Sbjct: 11 KTIWEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 57

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 2e-07
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 3/46 (6%)

Query: 47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          QW ++    +  R LG G+FG V+      +   +A+K L    ++
Sbjct: 2  QWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE 45

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 44.1 bits (103), Expect = 3e-07
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 9/55 (16%)

Query: 41 SHSTRDQWEIDRNSLKF--------VRKLGSGQFGEVWEGLWNNT-TPVAIKTLK 86
          +H  R+ W+ + + +++        VRKLG G++ EV+E +       V +K LK
Sbjct: 15 THRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK 69

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 42.9 bits (100), Expect = 7e-07
 Identities = 9/36 (25%), Positives = 18/36 (50%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSID 91
            + K+G G +G V++   N     A+K +++   D
Sbjct: 5  HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED 40

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 9e-07
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 50 IDRNSLKFVRKLGSGQFGEVWEGLWNNTT-PVAIKTLKMGSID 91
           D   LKF  ++G G F  V++GL   TT  VA   L+   + 
Sbjct: 6  NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT 48

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 1e-06
 Identities = 8/40 (20%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 49 EIDRNSLKFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKM 87
          E+  +  + + +LG+G  G V++     +   +A K + +
Sbjct: 2  ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL 41

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 1e-06
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 6/50 (12%)

Query: 46 DQWEIDRNSLK--FVRKLGSGQFGEVWEGLWNNT----TPVAIKTLKMGS 89
              I  +SL   F   +G G FG V+ G   +        A+K+L   +
Sbjct: 18 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 67

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 41.7 bits (97), Expect = 2e-06
 Identities = 7/34 (20%), Positives = 13/34 (38%)

Query: 59 RKLGSGQFGEVWEGLWNNTTPVAIKTLKMGSIDF 92
          + +G G+   V+           +K  K+G   F
Sbjct: 6  KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSF 39

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 2e-06
 Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          + + K+G G +G V++     T   VA+K +++   D
Sbjct: 5  EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD 41

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 2e-06
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 8/50 (16%)

Query: 45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSIDFV 93
           D WEI       + +LG G FG+V++     T    A K +   S + +
Sbjct: 11 EDFWEI-------IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL 53

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (96), Expect = 4e-06
 Identities = 7/37 (18%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          + +  +G+G +G   +    +    +  K L  GS+ 
Sbjct: 7  EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT 43

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 40.8 bits (95), Expect = 4e-06
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 52 RNSLKFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          R+   F   LG+G F EV       T   VAIK +   +++
Sbjct: 8  RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE 48

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 4e-06
 Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          + V K+G G +G V++     T   VA+K +++ +  
Sbjct: 5  QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET 41

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.6 bits (94), Expect = 5e-06
 Identities = 10/52 (19%), Positives = 22/52 (42%), Gaps = 3/52 (5%)

Query: 40 LSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSI 90
              +++  ++D+     ++ LG+G FG V       +    A+K L    +
Sbjct: 30 WETPSQNTAQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 6e-06
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 3/44 (6%)

Query: 49 EIDRNSLKFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          E+ +   + + K+G G FGEV++     T   VA+K + M +  
Sbjct: 8  EVSK--YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK 49

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 7e-06
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          +    LGSG FG V+ G+  +   PVAIK ++   I 
Sbjct: 7  QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 43

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (93), Expect = 7e-06
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSI 90
            V+ LG G +GEV   +   T   VA+K + M   
Sbjct: 8  DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA 43

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 7e-06
 Identities = 8/38 (21%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNTT--PVAIKTLKMGSID 91
          + V ++G G +G+V++          VA+K +++ + +
Sbjct: 10 ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE 47

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 8e-06
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSI 90
             + LG G FG+V+   +  T    AIK LK   +
Sbjct: 5  ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV 40

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 8e-06
 Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 51 DRNSLKFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSIDF 92
             S    + +G+G FG V++    ++   VAIK +       
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 60

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 40.0 bits (93), Expect = 9e-06
 Identities = 9/37 (24%), Positives = 13/37 (35%), Gaps = 1/37 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
            + +LGSG FG V   +   T      K +      
Sbjct: 32 DILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL 68

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 9e-06
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 5/41 (12%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-----TPVAIKTLKMGSID 91
          K ++ LGSG FG V++GLW         PVAIK L+  +  
Sbjct: 12 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP 52

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.7 bits (92), Expect = 9e-06
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          + +R LG+G FG V      +     A+K LK   + 
Sbjct: 7  QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV 43

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.0 bits (92), Expect = 1e-05
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
            VRKLG G F  VW        T VA+K ++   + 
Sbjct: 16 ILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY 52

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 1e-05
 Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 53 NSLKFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          N   +++ LG G FG+V       T    A+K L+   I 
Sbjct: 5  NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII 44

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 1e-05
 Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
              +LGSGQF  V +    +T    A K +K     
Sbjct: 13 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTK 49

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 1e-05
 Identities = 9/43 (20%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGS 89
          +++       +  +G G +G V     N     VAIK +    
Sbjct: 4  FDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE 45

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 39.4 bits (91), Expect = 1e-05
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          K  R++G G FG ++EG        VAIK     S  
Sbjct: 8  KVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA 44

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 1e-05
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 59 RKLGSGQFGEVWEGLWNNTTPVAIKTLKM 87
            +G G+FGEVW G W     VA+K    
Sbjct: 9  ESIGKGRFGEVWRGKWRG-EEVAVKIFSS 36

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 1e-05
 Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          + ++ +GSG  G V           VAIK L     +
Sbjct: 20 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 56

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 39.3 bits (91), Expect = 1e-05
 Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 53 NSLKFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          N     R +G G FGEV+     +T    A+K L    I 
Sbjct: 4  NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK 43

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.4 bits (91), Expect = 1e-05
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGS 89
          +  RK+GSG FG+++ G        VAIK   + +
Sbjct: 10 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT 44

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.8 bits (90), Expect = 2e-05
 Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
            +R++G G FG V+          VAIK +      
Sbjct: 18 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ 54

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 2e-05
 Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 1/37 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
               LG G+FG V   +  ++      K +K+   D
Sbjct: 8  MIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD 44

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 2e-05
 Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          KF + LG G F  V       T    AIK L+   I 
Sbjct: 11 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHII 47

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 38.6 bits (89), Expect = 3e-05
 Identities = 9/37 (24%), Positives = 12/37 (32%), Gaps = 1/37 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          +    LG G   EV           VA+K L+     
Sbjct: 10 ELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLAR 46

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 38.5 bits (89), Expect = 3e-05
 Identities = 9/37 (24%), Positives = 12/37 (32%), Gaps = 1/37 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
              +LG+G FG V       T    A K +      
Sbjct: 29 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES 65

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (88), Expect = 4e-05
 Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 1/37 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
              K+G G  G V+  +   T   VAI+ + +    
Sbjct: 23 TRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP 59

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 5e-05
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 59 RKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
            LG GQF  V++    NT   VAIK +K+G   
Sbjct: 4  DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRS 37

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 37.7 bits (87), Expect = 6e-05
 Identities = 7/37 (18%), Positives = 12/37 (32%), Gaps = 1/37 (2%)

Query: 56 KFVRKLGSGQFGEVWEGLWNNT-TPVAIKTLKMGSID 91
          +    LG G    V   +   T    A+K + +    
Sbjct: 6  EPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGG 42

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 1e-04
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 6/44 (13%)

Query: 49 EIDRNSL----KFVRK-LGSGQFGEVWEGLWNNT-TPVAIKTLK 86
          +I +N++    K   + LG G  G+V +     T    A+K L+
Sbjct: 3  QIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ 46

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 4e-04
 Identities = 11/54 (20%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 41 SHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEG----LWNNTTPVAIKTLKMGSI 90
          ++ T    ++   + + ++ LG+G +G+V+        +     A+K LK  +I
Sbjct: 12 ANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATI 65

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	93
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	98.92
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	98.89
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	98.66
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	98.61
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	98.49
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	98.46
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	98.44
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	98.44
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	98.43
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	98.4
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	98.38
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	98.37
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	98.3
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	98.22
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	98.21
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	98.04
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	98.03
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	98.02
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.01
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	97.89
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	97.88
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	97.85
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	97.83
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	97.82
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	97.81
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	97.81
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	97.79
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	97.79
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	97.77
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	97.77
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	97.77
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	97.75
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	97.71
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	97.71
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	97.7
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	97.69
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	97.69
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	97.68
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	97.67
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	97.66
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	97.65
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	97.64
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	97.62
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	97.62
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	97.61
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	97.6
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	97.59
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	97.59
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	97.55
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	97.54
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	97.54
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	97.54
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	97.53
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	97.52
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	97.5
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	97.49
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	97.48
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	97.48
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	97.46
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	97.45
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	97.43
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	97.42
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	97.18

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=9.7e-10  Score=73.77  Aligned_cols=52  Identities=63%  Similarity=1.072  Sum_probs=43.5

Q ss_pred             CccCCCCCCCCCceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCCC
Q psy12538         35 PVTGGLSHSTRDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS   89 (93)
Q Consensus        35 p~~~~~~~~~~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~~   89 (93)
                      |.+.+++   .+.|+++.+++.+.+.||+|+||.||+|+++++..||||.++...
T Consensus         2 ~~~~~~~---~~~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~   53 (285)
T d1fmka3           2 PQTQGLA---KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT   53 (285)
T ss_dssp             CCCSSSS---TTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS
T ss_pred             CCCCCCC---CcceEcCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc
Confidence            4444443   377999999999999999999999999999887789999997543

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=9.3e-10  Score=73.12  Aligned_cols=45  Identities=58%  Similarity=1.100  Sum_probs=40.5

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCCC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS   89 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~~   89 (93)
                      .++||++++++.+.+.||+|+||.||+|.++++..||||.++...
T Consensus         5 ~~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~   49 (272)
T d1qpca_           5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS   49 (272)
T ss_dssp             TCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS
T ss_pred             CCCeecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc
Confidence            467999999999999999999999999999887889999997543

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=1.2e-08  Score=67.89  Aligned_cols=41  Identities=39%  Similarity=0.877  Sum_probs=36.7

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      ++||++.+++.+.+.||+|+||.||+|.+++  .||||.++..
T Consensus         1 ddwei~~~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~   41 (276)
T d1uwha_           1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVT   41 (276)
T ss_dssp             CCCBCCTTCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCS
T ss_pred             CCcccccccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcc
Confidence            4699999999999999999999999999875  6999998654

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.61  E-value=8e-09  Score=69.07  Aligned_cols=44  Identities=48%  Similarity=1.015  Sum_probs=38.6

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCC-CCeEEEEEecCCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN-TTPVAIKTLKMGS   89 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~~~vavK~l~~~~   89 (93)
                      +.||++++++.+.+.||+|+||.||+|.+.. +..||||.++.+.
T Consensus        10 ~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~   54 (287)
T d1opja_          10 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT   54 (287)
T ss_dssp             CTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC
T ss_pred             cccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc
Confidence            5699999999999999999999999999854 6789999987543

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=3.2e-08  Score=66.51  Aligned_cols=43  Identities=44%  Similarity=0.825  Sum_probs=37.1

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~~   88 (93)
                      +.||++.+++.+.+.||+|+||.||+|.+.+      ...||||.++..
T Consensus        13 ~~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~   61 (308)
T d1p4oa_          13 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA   61 (308)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT
T ss_pred             cceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcc
Confidence            4699999999999999999999999998742      468999999653

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=6.7e-08  Score=63.62  Aligned_cols=39  Identities=49%  Similarity=0.805  Sum_probs=33.7

Q ss_pred             ecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCCC
Q psy12538         51 DRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS   89 (93)
Q Consensus        51 ~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~~   89 (93)
                      +.+++.+.+.||+|+||.||+|+++++..||||.++.+.
T Consensus         2 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~   40 (258)
T d1k2pa_           2 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS   40 (258)
T ss_dssp             CCCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS
T ss_pred             ChHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc
Confidence            456788889999999999999999888899999997643

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=1e-07  Score=62.87  Aligned_cols=40  Identities=33%  Similarity=0.730  Sum_probs=36.5

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      |+++..++.+.+.||+|+||.||+|.+++ ..||||.++..
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~vAvK~i~~~   41 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDYRG-NKVAVKCIKND   41 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEETT-EEEEEEECCCC
T ss_pred             CccCHHHeEEeEEEecCCCeEEEEEEECC-eEEEEEEECcH
Confidence            99999999999999999999999999976 58999999654

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=1.1e-07  Score=62.69  Aligned_cols=42  Identities=40%  Similarity=0.697  Sum_probs=35.5

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeCC----CCeEEEEEecCC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKMG   88 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~~   88 (93)
                      +||++++++.+.+.||+|+||.||+|.+..    ...||||.++..
T Consensus         1 ~~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~   46 (273)
T d1mp8a_           1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC   46 (273)
T ss_dssp             CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT
T ss_pred             CCCcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccc
Confidence            599999999999999999999999999743    246888888643

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=1.6e-07  Score=63.07  Aligned_cols=44  Identities=41%  Similarity=0.656  Sum_probs=37.5

Q ss_pred             CCceeEecCCceeeceEeeecccEEEEEEeC------CCCeEEEEEecCC
Q psy12538         45 RDQWEIDRNSLKFVRKLGSGQFGEVWEGLWN------NTTPVAIKTLKMG   88 (93)
Q Consensus        45 ~~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~------~~~~vavK~l~~~   88 (93)
                      ...|+++++.+.+.+.||+|+||.||+|++.      .+..||||.++..
T Consensus        15 ~~~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~   64 (311)
T d1t46a_          15 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS   64 (311)
T ss_dssp             CGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT
T ss_pred             cccccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcc
Confidence            3469999999999999999999999999873      2458999999754

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=1.6e-07  Score=61.71  Aligned_cols=40  Identities=53%  Similarity=0.878  Sum_probs=34.1

Q ss_pred             EecCCceeeceEeeecccEEEEEEeCCCCeEEEEEecCCC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMGS   89 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~~   89 (93)
                      ++.+++.+.+.||+|+||.||+|.+.++..||||.++.+.
T Consensus         2 idp~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~   41 (263)
T d1sm2a_           2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA   41 (263)
T ss_dssp             BCCSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS
T ss_pred             CChHHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc
Confidence            4556788889999999999999999877789999997543

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=9.5e-08  Score=63.57  Aligned_cols=43  Identities=42%  Similarity=0.659  Sum_probs=35.1

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~~   88 (93)
                      ..|+++++++.+.+.||+|+||.||+|.+..      +..||||.++..
T Consensus         6 ~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~   54 (299)
T d1ywna1           6 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG   54 (299)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC---
T ss_pred             ccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccc
Confidence            4699999999999999999999999999742      347999998753

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.37  E-value=1.2e-07  Score=63.38  Aligned_cols=42  Identities=38%  Similarity=0.600  Sum_probs=36.3

Q ss_pred             ceeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecCC
Q psy12538         47 QWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKMG   88 (93)
Q Consensus        47 ~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~~   88 (93)
                      .||++++++.+.+.||+|+||.||+|++++      +..||||.++..
T Consensus         7 ~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~   54 (301)
T d1lufa_           7 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE   54 (301)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT
T ss_pred             hccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChh
Confidence            488999999999999999999999999743      357999998754

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=2.7e-07  Score=62.31  Aligned_cols=42  Identities=40%  Similarity=0.646  Sum_probs=35.5

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCC------CCeEEEEEecC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN------TTPVAIKTLKM   87 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~------~~~vavK~l~~   87 (93)
                      ..||++++++.+.+.||+|+||.||+|++.+      ...||+|.+..
T Consensus        30 ~kwei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~   77 (325)
T d1rjba_          30 LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKE   77 (325)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC
T ss_pred             ccccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecc
Confidence            4599999999999999999999999999743      12589998854

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=6.5e-07  Score=59.24  Aligned_cols=40  Identities=45%  Similarity=0.822  Sum_probs=32.6

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeCCC-----CeEEEEEecCC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWNNT-----TPVAIKTLKMG   88 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~~~-----~~vavK~l~~~   88 (93)
                      |++.+++.+.+.||+|+||.||+|.++..     ..||||.++..
T Consensus         3 ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~   47 (283)
T d1mqba_           3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG   47 (283)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT
T ss_pred             cCCHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcc
Confidence            56677888899999999999999998542     36899998654

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=3e-07  Score=61.31  Aligned_cols=44  Identities=36%  Similarity=0.555  Sum_probs=31.7

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeCC--------CCeEEEEEecCCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWNN--------TTPVAIKTLKMGS   89 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~~--------~~~vavK~l~~~~   89 (93)
                      ..|+++++.+.+.+.||+|+||.||+|+...        ...||||.++.+.
T Consensus         6 ~~~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~   57 (299)
T d1fgka_           6 PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA   57 (299)
T ss_dssp             TTTBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC
T ss_pred             CcCcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc
Confidence            4599999999999999999999999998632        2468999986543

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=98.04  E-value=3.9e-06  Score=55.09  Aligned_cols=35  Identities=23%  Similarity=0.461  Sum_probs=30.5

Q ss_pred             CceeeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||+|+.+++..||||.++..
T Consensus         3 ~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~   37 (286)
T d1ob3a_           3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLE   37 (286)
T ss_dssp             SEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCS
T ss_pred             CceeccEEecCCCcEEEEEEeCCCCEEEEEEEehh
Confidence            46677899999999999999988889999998653

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=2.7e-06  Score=56.45  Aligned_cols=41  Identities=39%  Similarity=0.631  Sum_probs=32.6

Q ss_pred             eeEecCCceeece-EeeecccEEEEEEeCC---CCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRK-LGSGQFGEVWEGLWNN---TTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~-iG~G~fG~V~~g~~~~---~~~vavK~l~~~   88 (93)
                      |.+.++++.+.+. ||+|+||.||+|.++.   +..||||.++..
T Consensus         3 l~l~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~   47 (285)
T d1u59a_           3 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG   47 (285)
T ss_dssp             CBCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS
T ss_pred             eeecccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChh
Confidence            5577778888874 9999999999998743   447999999754

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=98.02  E-value=3.9e-06  Score=56.11  Aligned_cols=36  Identities=39%  Similarity=0.650  Sum_probs=30.4

Q ss_pred             CCceeeceEeeecccEEEEEEe-CCCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~   88 (93)
                      .++.+.+.||+|+||.||+|+. .++..||+|.++..
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~   71 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV   71 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH
Confidence            4677888999999999999997 45789999998754

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.01  E-value=3.7e-06  Score=52.32  Aligned_cols=32  Identities=19%  Similarity=0.280  Sum_probs=27.6

Q ss_pred             eeceEeeecccEEEEEEeCCCCeEEEEEecCC
Q psy12538         57 FVRKLGSGQFGEVWEGLWNNTTPVAIKTLKMG   88 (93)
Q Consensus        57 ~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~~   88 (93)
                      +.+.||+|+||.||+|...++..||||.++.+
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~   35 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVG   35 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC-
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecc
Confidence            57899999999999999877789999988654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=6e-06  Score=55.02  Aligned_cols=33  Identities=36%  Similarity=0.882  Sum_probs=28.7

Q ss_pred             CceeeceEeeecccEEEEEEeCCCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWNNTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||+|++++ ..||||.++.
T Consensus         4 ~~~l~~~iG~G~fg~Vy~~~~~g-~~vAvK~~~~   36 (303)
T d1vjya_           4 TIVLQESIGKGRFGEVWRGKWRG-EEVAVKIFSS   36 (303)
T ss_dssp             GEEEEEEEECCSSSEEEEEEETT-EEEEEEEECG
T ss_pred             EEEEEEEEeeCCCeEEEEEEECC-EEEEEEEECc
Confidence            56788899999999999999875 6899999854

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.88  E-value=7.3e-06  Score=54.55  Aligned_cols=41  Identities=46%  Similarity=0.611  Sum_probs=32.9

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeCC----CCeEEEEEecCC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKMG   88 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~~   88 (93)
                      .+++.+++.+.+.||+|+||.||+|.++.    ...||||.+...
T Consensus        21 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~   65 (299)
T d1jpaa_          21 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG   65 (299)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSS
T ss_pred             hhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcc
Confidence            46777889999999999999999999853    235888988653

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=5.6e-06  Score=55.19  Aligned_cols=39  Identities=33%  Similarity=0.540  Sum_probs=31.1

Q ss_pred             eEecCCceeeceEeeecccEEEEEEeCC-C--CeEEEEEecC
Q psy12538         49 EIDRNSLKFVRKLGSGQFGEVWEGLWNN-T--TPVAIKTLKM   87 (93)
Q Consensus        49 ei~~~~~~~~~~iG~G~fG~V~~g~~~~-~--~~vavK~l~~   87 (93)
                      .|+.+++.+.+.||+|+||.||+|.++. +  ..||||.++.
T Consensus         6 ~i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~   47 (309)
T d1fvra_           6 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE   47 (309)
T ss_dssp             BCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred             ccCHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECc
Confidence            3566788899999999999999999854 2  3578888754

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=1.2e-05  Score=52.63  Aligned_cols=34  Identities=38%  Similarity=0.631  Sum_probs=28.8

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||+|+.. ++..||||.++.
T Consensus         5 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~   39 (273)
T d1xwsa_           5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK   39 (273)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEG
T ss_pred             eEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEeh
Confidence            4667789999999999999974 578999999864

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=1.5e-05  Score=52.24  Aligned_cols=37  Identities=19%  Similarity=0.348  Sum_probs=30.2

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMGS   89 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~~   89 (93)
                      +++.+.+.||+|+||.||+++.+ ++..||+|.++...
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~   41 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS   41 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTT
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhh
Confidence            35667789999999999999974 46789999986543

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=7.2e-06  Score=54.03  Aligned_cols=38  Identities=42%  Similarity=0.667  Sum_probs=27.3

Q ss_pred             ecCCceee-ceEeeecccEEEEEEeCC---CCeEEEEEecCC
Q psy12538         51 DRNSLKFV-RKLGSGQFGEVWEGLWNN---TTPVAIKTLKMG   88 (93)
Q Consensus        51 ~~~~~~~~-~~iG~G~fG~V~~g~~~~---~~~vavK~l~~~   88 (93)
                      ++..+.++ +.||+|+||.||+|.++.   ...||||.++..
T Consensus         4 d~~~~~le~k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~   45 (277)
T d1xbba_           4 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE   45 (277)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC--
T ss_pred             chhhCeecCCCcccCCCeEEEEEEEccCCcCeEEEEEEEChh
Confidence            33445555 469999999999998753   357999998653

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=9.4e-06  Score=54.61  Aligned_cols=42  Identities=31%  Similarity=0.516  Sum_probs=28.7

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ..|++ ++.+.+.+.||+|+||.||+|... .+..||||.++..
T Consensus        12 ~~~~~-~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~   54 (346)
T d1cm8a_          12 TAWEV-RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRP   54 (346)
T ss_dssp             SEECC-BSSEEEEEEC------CEEEEEETTTCCEEEEEECSST
T ss_pred             ceeec-CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchh
Confidence            45787 467888899999999999999974 4789999999653

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=2.1e-05  Score=51.30  Aligned_cols=35  Identities=23%  Similarity=0.492  Sum_probs=29.0

Q ss_pred             CceeeceEeeecccEEEEEEe-CCCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||+|+. .++..||||.++..
T Consensus         3 ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~   38 (292)
T d1unla_           3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLD   38 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESS
T ss_pred             CCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehh
Confidence            456678999999999999997 45678999998653

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=1.9e-05  Score=52.07  Aligned_cols=35  Identities=29%  Similarity=0.181  Sum_probs=29.3

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||+|+.+ ++..||||.++..
T Consensus        11 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~   46 (293)
T d1jksa_          11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKR   46 (293)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBC
T ss_pred             CEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhh
Confidence            4667789999999999999974 4679999998643

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=1.4e-05  Score=53.64  Aligned_cols=42  Identities=26%  Similarity=0.461  Sum_probs=34.9

Q ss_pred             CceeEecCCceeeceEeeecccEEEEEEe-CCCCeEEEEEecCC
Q psy12538         46 DQWEIDRNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMG   88 (93)
Q Consensus        46 ~~~ei~~~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~   88 (93)
                      ..|+++ +.+.+.+.||+|+||.||+|+. .+++.||||.++..
T Consensus        12 ~~~~~~-~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~   54 (348)
T d2gfsa1          12 TIWEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP   54 (348)
T ss_dssp             SEEEEE-TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCT
T ss_pred             ccccCC-CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECch
Confidence            458886 4688889999999999999986 45789999998653

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.77  E-value=2e-05  Score=51.89  Aligned_cols=35  Identities=34%  Similarity=0.478  Sum_probs=28.9

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||+|+.. ++..||||.+...
T Consensus         8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~   43 (299)
T d1ckia_           8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK   43 (299)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESC
T ss_pred             EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchh
Confidence            4667789999999999999974 4679999987653

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=97.77  E-value=2.4e-05  Score=51.68  Aligned_cols=35  Identities=37%  Similarity=0.495  Sum_probs=29.4

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +++.+.+.||+|+||.||+|+.. ++..||||.++.
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~   40 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPR   40 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEEC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcc
Confidence            46677889999999999999974 467899998854

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=1.4e-05  Score=53.49  Aligned_cols=39  Identities=18%  Similarity=0.314  Sum_probs=31.7

Q ss_pred             EecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +..+++.+.+.||+|+||.||+|+.. ++..||+|.++..
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~   42 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE   42 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECC
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChh
Confidence            44556777889999999999999974 4679999998653

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=4.8e-06  Score=54.80  Aligned_cols=39  Identities=44%  Similarity=0.778  Sum_probs=24.4

Q ss_pred             EecCCceeeceEeeecccEEEEEEeCC----CCeEEEEEecCC
Q psy12538         50 IDRNSLKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKMG   88 (93)
Q Consensus        50 i~~~~~~~~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~~   88 (93)
                      |+..++.+.+.||+|+||.||+|.+..    ...||||.++..
T Consensus         5 i~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~   47 (273)
T d1u46a_           5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPD   47 (273)
T ss_dssp             CCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC----
T ss_pred             EchHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChh
Confidence            455678888999999999999998743    236899988653

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=1.9e-05  Score=51.73  Aligned_cols=37  Identities=30%  Similarity=0.587  Sum_probs=30.8

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      |.++  ++.+.+.||+|+||.||+++.+ ++..||+|.+.
T Consensus         3 ~~l~--dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~   40 (263)
T d2j4za1           3 WALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF   40 (263)
T ss_dssp             CCGG--GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred             cchh--HeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEc
Confidence            5554  5778889999999999999985 46789999985

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=2.5e-05  Score=51.71  Aligned_cols=35  Identities=31%  Similarity=0.547  Sum_probs=28.4

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      +.+.+.+.||+|+||.||+|+.. ++..||||.+..
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~   45 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLM   45 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeh
Confidence            45667789999999999999974 578999999853

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=2.3e-05  Score=52.65  Aligned_cols=33  Identities=33%  Similarity=0.556  Sum_probs=28.7

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      ++.+.+.||+|+||.||+|... ++..||||.++
T Consensus         3 dy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~   36 (320)
T d1xjda_           3 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALK   36 (320)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEE
T ss_pred             CeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEc
Confidence            5677889999999999999974 47799999985

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.69  E-value=3.3e-05  Score=50.39  Aligned_cols=35  Identities=26%  Similarity=0.232  Sum_probs=29.2

Q ss_pred             CceeeceEeeecccEEEEEEe-CCCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||++.. ..++.||+|.++..
T Consensus         8 rY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~   43 (277)
T d1o6ya_           8 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD   43 (277)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECST
T ss_pred             eeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchh
Confidence            466778999999999999996 45779999999654

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=3e-05  Score=51.32  Aligned_cols=35  Identities=23%  Similarity=0.433  Sum_probs=28.6

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||+|+.. ++..||+|.++..
T Consensus        13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~   48 (288)
T d2jfla1          13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK   48 (288)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS
T ss_pred             CeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcC
Confidence            3456778999999999999975 4678999998653

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=3e-05  Score=51.82  Aligned_cols=33  Identities=30%  Similarity=0.575  Sum_probs=26.0

Q ss_pred             ceeeceEeeecccEEEEEEeCC----CCeEEEEEecC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWNN----TTPVAIKTLKM   87 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~~----~~~vavK~l~~   87 (93)
                      +.+.+.||+|+||.||+|++..    ...||||.++.
T Consensus        29 ~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~   65 (311)
T d1r0pa_          29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR   65 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEECC----CEEEEEEEECC
T ss_pred             eccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECc
Confidence            3457789999999999999843    23589999864

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=3.3e-05  Score=50.95  Aligned_cols=34  Identities=26%  Similarity=0.513  Sum_probs=28.4

Q ss_pred             CceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||+|.. ..++.||+|.++.
T Consensus         3 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~   37 (298)
T d1gz8a_           3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL   37 (298)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-
T ss_pred             CCEeccEEecCcCeEEEEEEECCCCCEEEEEEEeh
Confidence            566778999999999999997 4467999999864

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=3.5e-05  Score=50.62  Aligned_cols=34  Identities=32%  Similarity=0.544  Sum_probs=28.6

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      ++.+.+.||+|+||.||+|+.+ ++..||+|.++.
T Consensus         6 dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~   40 (271)
T d1nvra_           6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM   40 (271)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC
T ss_pred             ceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeh
Confidence            4566789999999999999975 467999999864

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=3.2e-05  Score=51.57  Aligned_cols=36  Identities=47%  Similarity=0.863  Sum_probs=27.7

Q ss_pred             CCceeeceEeeecccEEEEEEeCC-C----CeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWNN-T----TPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~~-~----~~vavK~l~~~   88 (93)
                      .++.+.+.||+|+||.||+|.+.. +    ..||+|.++..
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~   49 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA   49 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccc
Confidence            457778899999999999999743 2    25899988653

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=3.5e-05  Score=51.03  Aligned_cols=34  Identities=32%  Similarity=0.386  Sum_probs=28.9

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      +++.+.+.||+|+||.||+|... ++..||||.++
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~   42 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE   42 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEe
Confidence            45677889999999999999974 46799999985

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=3.9e-05  Score=51.75  Aligned_cols=34  Identities=26%  Similarity=0.391  Sum_probs=28.5

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +...+.||+|+||.||+|+.. .+..||||.++..
T Consensus        22 Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~   56 (350)
T d1q5ka_          22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD   56 (350)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC
T ss_pred             cEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECcc
Confidence            556678999999999999975 4789999999654

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=3.7e-05  Score=51.57  Aligned_cols=36  Identities=22%  Similarity=0.328  Sum_probs=29.8

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +.+.+.+.||+|+||.||+|... ++..||+|.++..
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~   41 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK   41 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCC
Confidence            34667789999999999999975 4678999999754

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.60  E-value=4.2e-05  Score=52.16  Aligned_cols=34  Identities=32%  Similarity=0.451  Sum_probs=28.8

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      .++.+.+.||+|+||.||+++.. ++..||+|.+.
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~   38 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD   38 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEc
Confidence            35677789999999999999975 47899999985

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.59  E-value=6.2e-05  Score=49.49  Aligned_cols=36  Identities=17%  Similarity=0.175  Sum_probs=30.0

Q ss_pred             CCceeeceEeeecccEEEEEEe-CCCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~   88 (93)
                      .++.+.+.||+|+||.||+++. .++..+|||.++..
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~   39 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVT   39 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETT
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecc
Confidence            3567788999999999999997 45779999998653

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.59  E-value=4.7e-05  Score=50.97  Aligned_cols=34  Identities=41%  Similarity=0.560  Sum_probs=29.0

Q ss_pred             ceeeceEeeecccEEEEEEe-CCCCeEEEEEecCC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKMG   88 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~~   88 (93)
                      +.+.+.||+|+||.||+|+. .++..||||+++..
T Consensus        15 Y~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~   49 (362)
T d1q8ya_          15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD   49 (362)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC
T ss_pred             EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc
Confidence            66788999999999999997 45789999998653

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.55  E-value=5e-05  Score=50.83  Aligned_cols=33  Identities=36%  Similarity=0.488  Sum_probs=28.5

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      ++.+.+.||+|+||.||+++.+ ++..||+|.++
T Consensus         5 dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~   38 (316)
T d1fota_           5 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLK   38 (316)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred             HeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEc
Confidence            5677889999999999999974 46799999985

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=97.54  E-value=5.7e-05  Score=51.28  Aligned_cols=35  Identities=23%  Similarity=0.244  Sum_probs=29.3

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ++.+.+.||+|+||.||+++.. .+..||||.+...
T Consensus        27 ~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~   62 (350)
T d1koaa2          27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP   62 (350)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCC
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEccc
Confidence            5667789999999999999974 4679999998653

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.54  E-value=5.9e-05  Score=50.34  Aligned_cols=34  Identities=32%  Similarity=0.481  Sum_probs=28.2

Q ss_pred             ceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         55 LKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        55 ~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      +...+.||+|+||.||+|+.. ++..||||.++..
T Consensus        17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~   51 (309)
T d1u5ra_          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYS   51 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECC
T ss_pred             cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchh
Confidence            556678999999999999974 4678999998653

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=5.1e-05  Score=49.85  Aligned_cols=35  Identities=26%  Similarity=0.467  Sum_probs=27.9

Q ss_pred             CCceeeceEeeecccEEEEEEeC-C-CCeEEEEEecC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-N-TTPVAIKTLKM   87 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~-~~~vavK~l~~   87 (93)
                      +.+.+.+.||+|+||.||+++.. . +..||||.++.
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~   43 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV   43 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEE
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEeh
Confidence            35666789999999999999973 3 55789999853

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=5.2e-05  Score=49.68  Aligned_cols=32  Identities=38%  Similarity=0.507  Sum_probs=26.6

Q ss_pred             eeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         56 KFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        56 ~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.||+|+||.||+|... .+..||+|.+..
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~   44 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQD   44 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEG
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEch
Confidence            45668999999999999975 467899999864

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=4.5e-05  Score=51.51  Aligned_cols=35  Identities=29%  Similarity=0.274  Sum_probs=27.7

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||+|+.. ++..||||.++..
T Consensus        18 ~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~   53 (355)
T d2b1pa1          18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP   53 (355)
T ss_dssp             TEEEEEECSCC--CEEEEEEETTTTEEEEEEEEEST
T ss_pred             CeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChh
Confidence            4677789999999999999975 4789999999654

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.50  E-value=3.6e-05  Score=51.34  Aligned_cols=36  Identities=31%  Similarity=0.337  Sum_probs=29.3

Q ss_pred             CCceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         53 NSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        53 ~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      ..+.+.+.||+|+||.||++... ++..||+|.+...
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~   45 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKK   45 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-
T ss_pred             cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchH
Confidence            34677889999999999999975 4678999998643

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=6.2e-05  Score=50.90  Aligned_cols=36  Identities=28%  Similarity=0.393  Sum_probs=30.0

Q ss_pred             cCCceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+++.+.+.||+|+||.||+++.+ ++..||+|.++.
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k   40 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRK   40 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEH
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEch
Confidence            346777889999999999999974 478999999853

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=5.4e-05  Score=50.90  Aligned_cols=39  Identities=23%  Similarity=0.368  Sum_probs=28.5

Q ss_pred             eeEecCCceeeceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         48 WEIDRNSLKFVRKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        48 ~ei~~~~~~~~~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      |++.. .+.+.+.||+|+||.||+|.. .+++.||||.++.
T Consensus         4 ~~i~~-rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~   43 (345)
T d1pmea_           4 FDVGP-RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP   43 (345)
T ss_dssp             CCCCT-TEEEEEECC---CCCEEEEEETTTCSEEEEEEECC
T ss_pred             cCcCC-CeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEeh
Confidence            55543 477788999999999999986 4578999999864

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=5.4e-05  Score=49.80  Aligned_cols=31  Identities=39%  Similarity=0.594  Sum_probs=24.3

Q ss_pred             eceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         58 VRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        58 ~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.||+|+||.||+|+.. +++.||||.++..
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~   34 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLG   34 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC---
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehh
Confidence            357999999999999974 4779999998643

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=7.1e-05  Score=50.11  Aligned_cols=36  Identities=25%  Similarity=0.383  Sum_probs=29.2

Q ss_pred             cCCceeeceEeeecccEEEEEEeC----CCCeEEEEEecC
Q psy12538         52 RNSLKFVRKLGSGQFGEVWEGLWN----NTTPVAIKTLKM   87 (93)
Q Consensus        52 ~~~~~~~~~iG~G~fG~V~~g~~~----~~~~vavK~l~~   87 (93)
                      .+++.+.+.||+|+||.||++...    .+..||+|.++.
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~   62 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKK   62 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESE
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEeh
Confidence            356778889999999999999852    357899999853

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=97.45  E-value=9.7e-05  Score=50.14  Aligned_cols=35  Identities=23%  Similarity=0.310  Sum_probs=29.2

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecCC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKMG   88 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~~   88 (93)
                      .+.+.+.||+|+||.||+++.. ++..||||.++..
T Consensus        30 ~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~   65 (352)
T d1koba_          30 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP   65 (352)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCc
Confidence            4667789999999999999974 4789999998653

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.43  E-value=8.8e-05  Score=50.29  Aligned_cols=33  Identities=27%  Similarity=0.431  Sum_probs=28.3

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEec
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLK   86 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~   86 (93)
                      ++.+.+.||+|+||.||+++.+ ++..||+|.++
T Consensus        42 ~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~   75 (350)
T d1rdqe_          42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD   75 (350)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred             CeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEc
Confidence            5667789999999999999974 47799999985

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=5.8e-05  Score=50.08  Aligned_cols=34  Identities=24%  Similarity=0.408  Sum_probs=28.1

Q ss_pred             CceeeceEeeecccEEEEEEeC-CCCeEEEEEecC
Q psy12538         54 SLKFVRKLGSGQFGEVWEGLWN-NTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~~~iG~G~fG~V~~g~~~-~~~~vavK~l~~   87 (93)
                      .+.+.+.||+|+||.||++... ++..||+|.++.
T Consensus        21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~   55 (293)
T d1yhwa1          21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL   55 (293)
T ss_dssp             TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEG
T ss_pred             ccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEec
Confidence            4566778999999999999964 467999999854

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.00027  Score=47.46  Aligned_cols=34  Identities=26%  Similarity=0.299  Sum_probs=26.8

Q ss_pred             Cceee-ceEeeecccEEEEEEe-CCCCeEEEEEecC
Q psy12538         54 SLKFV-RKLGSGQFGEVWEGLW-NNTTPVAIKTLKM   87 (93)
Q Consensus        54 ~~~~~-~~iG~G~fG~V~~g~~-~~~~~vavK~l~~   87 (93)
                      ++.+. +.||+|+||.||+|+. .++..||||.++.
T Consensus        12 ~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~   47 (335)
T d2ozaa1          12 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD   47 (335)
T ss_dssp             TEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC
T ss_pred             CEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC
Confidence            34443 4699999999999997 4467999999864