Diaphorina citri psyllid: psy12708

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-----

MIFKECASDGQEECQNTLQSQVDQSMDSVQSRLDASRRPYIEILEQPKSKVRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVSKDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGIQCMKKKDIQAFRLYLQFCQRPFNSEKNSAWTLLGVMGFNNRDNLDLNAVRLCFQAYLPKDKDNVIKLEPVVSDIIYDAKTYSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYEEQDGVVVWDERVKTLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLVTKKDISEPYNFMLTPLDSGRPIFWRYRKNKAQPLALVNLFQNTMTQFVPGEEKKISQDEQIVSAEPIKEKENDYARVDKSVNINMKPHVTFSQHDTDMETNQVPDVLFDTKEKIDERFEELLNEVSNLKDTLEEKNDFLLIEDSNNAVITLDELDDLNNNVNESSVTIEEVHEFPKEHLGQRTEGYGSYSSLQLAMKNQYFIDRNSGGECYEDVLPPQDIPTPPPEVATPPVKPVALSNVKVVIPPASKVTTPPPRPPSHTKPNLATLQRKSTSDKFDSVSTHDDNIPPLPPKRSRKSGLDKNLPPVPKYKSFFHKLFFKSKSKSKPATPRERSLSIDSRKVGGGGSINDDVMLTEAEHYALYTSVAPHATQSEFDEASFYYSPVEGLATK

ccccccccccccHHHccccccccccccccccccccccccEEEEEEcccccccCEEEccccccccccccccccccccccEEEEccccccEEEEEEEECccccccccccEEEccccccccEEEEEcccccCEEEECcccccccccccHHHHHHHHHHccccccccccHHHHHHcccccccccccccccEEEEEEEEECcccccCEECccEEEccccccccccccCEEEEcccccccccccEEEEEEccccccccEEEEEEccccccccEEEcccccccccEEEEEEccccccccccccEEEEEEEEcccccccccccEECcccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccCEEcccccccccc

****************************************IEILEQPKSKVRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVSKDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGIQCMKKKDIQAFRLYLQFCQRPFNSEKNSAWTLLGVMGFNNRDNLDLNAVRLCFQAYLPKDKDNVIKLEPVVSDIIYDAKTYSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYEEQDGVVVWDERVKTLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLVTKKDISEPYNFMLTPLDSGRPIFWRYRK*****************************************************************************VLFDT**KIDERFEELLNEVSNLKDTLEEKNDFLLIEDSNNAVITLDELDDLNNNV****VTI**V*************GYGSYSSLQLAMKNQYFIDRNSGGECYEDV***********************************************************************************************YKSFFHKLFF******************************DDVMLTEAEHYALYTSVAPHATQSEFDEASFYYSPVEGLA**

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MIFKECASDGQEECQNTLQSQVDQSMDSVQSRLDASRRPYIEILEQPKSKVRFRYECEGRSAGSIMGANSTLECKSYPKIMIRNYVGDAHLVVSCVSKDSPYRSHPHKLVSKDNCTNGIFCATLLEGDMTYSFTNLGIQCMKKKDIQAFRLYLQFCQRPFNSEKNSAWTLLGVMGFNNRDNLDLNAVRLCFQAYLPKDKDNVIKLEPVVSDIIYDAKTYSDLTIHTLSHVSAPVVGDMKMIILCDKVNKDDIEVRFYEEQDGVVVWDERVKTLEVHKQYAIVLKTPAYKSFEINDPVHVKIQLVTKKDISEPYNFMLTPLDSGRPIFWRYRKNKAQPLALVNLFQNTMTQFVPGEEKKISQDEQIVSAEPIKEKENDYARVDKSVNINMKPHVTFSQHDTDMETNQVPDVLFDTxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxDSNNAVITLDELDDLNNNVNESSVTIEEVHEFPKEHLGQRTEGYGSYSSLQLAMKNQYFIDRNSGGECYEDVLPPQDIPTPPPEVATPPVKPVALSNVKVVIPPASKVTTPPPRPPSHTKPNLATLQRKSTSDKFDSVSTHDDNIPPLPPKRSRKSGLDKNLPPVPKYKSFFHKLFFKSKSKSKPATPRERSLSIDSRKVGGGGSINDDVMLTEAEHYALYTSVAPHATQSEFDEASFYYSPVEGLATK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0002682 [BP]	regulation of immune system process	probable	GO:0008150, GO:0065007, GO:0050789
GO:0043565 [MF]	sequence-specific DNA binding	probable	GO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0043234 [CC]	protein complex	probable	GO:0005575, GO:0032991
GO:0051239 [BP]	regulation of multicellular organismal process	probable	GO:0008150, GO:0065007, GO:0050789
GO:0045893 [BP]	positive regulation of transcription, DNA-dependent	probable	GO:0009893, GO:0019222, GO:0031328, GO:0031326, GO:0031325, GO:2001141, GO:0031323, GO:0010628, GO:0050789, GO:0080090, GO:0010604, GO:0009891, GO:2000112, GO:0019219, GO:0065007, GO:0048518, GO:0010468, GO:0045935, GO:0060255, GO:0009889, GO:0050794, GO:0008150, GO:0051171, GO:0051173, GO:0051252, GO:0051254, GO:0006355, GO:0010557, GO:0010556, GO:0048522
GO:0005737 [CC]	cytoplasm	probable	GO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0031981 [CC]	nuclear lumen	probable	GO:0005575, GO:0043231, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0000981 [MF]	sequence-specific DNA binding RNA polymerase II transcription factor activity	probable	GO:0003700, GO:0003674, GO:0001071

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1IKN, chain A
Confidence level:very confident
Coverage over the Query: 39-162,175-332
View the alignment between query and template
View the model in PyMOL

Template: 1SVC, chain P
Confidence level:very confident
Coverage over the Query: 39-320
View the alignment between query and template
View the model in PyMOL