Diaphorina citri psyllid: psy12711

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------64

MLIEYLDSKILKKYRFQLFHSERQDNTSSTSTSIHRSKVQVQLLYMTEEQQLKPGLEQWCFCFSIPTSTSSVNTSLCINYMESKQLENSSPVWELRDNTLNVKPNCRTFVFEKEGHTFGSVITHILQSYPEVDFAGYSVPHPADFQIFIRIQVKDGYDSIDILKKGIKELESACDRITETFNDAMQCKVILKLTLLVIQKASKNLRVLVIGSQKHSMMQCRNMDSNHDVEKYRYEDSMDYIKIPIEAIRPKTRQVLNDKLCDIKQLMSPENYQRDYRGLADLMDIKAPPNPNCEDLMKKMFEDWTKSSTLDRSVFNIATFLHFLECIDRFDVYDDCIGFIEEDCLYYENTRLGNSISKNGACMDDPSVITIEDVKSLNLGCGLAHYDALLLYDEADFDLAKQFNTQLNKMGFTVCDKDNSFLTGQFEHSAFIQVMDRCTCVIVLMSTHFMNNSLLHSLTQYAEAKHIDHTIHSKIIPILCSDDYFSVGFLQYCVKLKLNHYASNMEQFWDRLYYSLKGVGKGVPEWDFASNMEQFWDRLYYSLKGVGKGSQKQAIQFQTTPTSMPVAPPDYTLSQQAVAPPDYTLPQQATNSQSITNNMSEEKKDSMKKPMLMLTLQNGIRNTLKVFKPNKKKTKALCS

cHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEHHHHHcccccccccccccccccccccccccccccccccccccccccEEEECccccccccCEEEEEccccccHHHHHHHHHHccccEEEEEccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccEEcccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHcccccHHHccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHccccccEEEECcccccccccHHHHHHHHHHHccEEEEEEcccccccHHHHHHHHHHHHHcccccccCEEEEEEcccccccHHccccEEEEccccccccHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccEEEEEEcccccccEEECcccccccccccc

*LIEYLDSKILKKYRFQLF*******************VQVQLLYMTEEQQLKPGLEQWCF**************************NSSPVWELRDNTLNVKPNCRTFVFEKEGHTFGSVITHILQSYPEVDFAGYSVPHPADFQIFIRIQVKDGYDSIDILKKGIKELESACDRITETFNDAMQCKVILKLTLLVIQKASKNLRVLVIGSQKH*MM*C******HDVEKYRYEDSMDYIKIPIEAIRPKTRQVLNDKLCDIKQLMSPENYQRDYRGLADLMDIKAPPNPNCEDLMKKMFEDWTKSSTLDRSVFNIATFLHFLECIDRFDVYDDCIGFIEEDCLYYENTRLGNSISKNGACMDDPSVITIEDVKSLNLGCGLAHYDALLLYDEADFDLAKQFNTQLNKMGFTVCDKDNSFLTGQFEHSAFIQVMDRCTCVIVLMSTHFMNNSLLHSLTQYAEAKHIDHTIHSKIIPILCSDDYFSVGFLQYCVKLKLNHYASNMEQFWDRLYYSLKGVGKGVPEWDFASNMEQFWDRLYYSLKG********************************************************************LTLQNGIRNTLKVFKPNKK*******

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MLIEYLDSKILKKYRFQLFHSERQDNTSSTSTSIHRSKVQVQLLYMTEEQQLKPGLEQWCFCFSIPTSTSSVNTSLCINYMESKQLENSSPVWELRDNTLNVKPNCRTFVFEKEGHTFGSVITHILQSYPEVDFAGYSVPHPADFQIFIRIQVKDGYDSxxxxxxxxxxxxxxxxxxxxxFNDAMQCKVILKLTLLVIQKASKNLRVLVIGSQKHSMMQCRNMDSNHDVEKYRYEDSMDYIKIPIEAIRPKTRQVLNDKLCDIKQLMSPENYQRDYRGLADLMDIKAPPNPNCEDLMKKMFEDWTKSSTLDRSVFNIATFLHFLECIDRFDVYDDCIGFIEEDCLYYENTRLGNSISKNGACMDDPSVITIEDVKSLNLGCGLAHYDALLLYDEADFDLAKQFNTQLNKMGFTVCDKDNSFLTGQFEHSAFIQVMDRCTCVIVLMSTHFMNNSLLHSLTQYAEAKHIDHTIHSKIIPILCSDDYFSVGFLQYCVKLKLNHYASNMEQFWDRLYYSLKGVGKGVPEWDFASNMEQFWDRLYYSLKGVGKGSQKQAIQFQTTPTSMPVAPPDYTLSQQAVAPPDYTLPQQATNSQSITNNMSEEKKDSMKKPMLMLTLQNGIRNTLKVFKPNKKKTKALCS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0055029 [CC]	nuclear DNA-directed RNA polymerase complex	probable	GO:0043234, GO:0005575, GO:0032991, GO:0030880, GO:0044464, GO:0005634, GO:0000428, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044428, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0044451 [CC]	nucleoplasm part	probable	GO:0044446, GO:0043231, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0005654, GO:0070013, GO:0043229, GO:0044428, GO:0031974, GO:0005575, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0043232 [CC]	intracellular non-membrane-bounded organelle	probable	GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3H0G, chain K
Confidence level:very confident
Coverage over the Query: 75-194
View the alignment between query and template
View the model in PyMOL

Template: 2JS7, chain A
Confidence level:very confident
Coverage over the Query: 367-516
View the alignment between query and template
View the model in PyMOL

Template: 1T3G, chain A
Confidence level:very confident
Coverage over the Query: 384-493,507-542
View the alignment between query and template
View the model in PyMOL

Template: 3MOP, chain A
Confidence level:confident
Coverage over the Query: 243-350
View the alignment between query and template
View the model in PyMOL

Template: 3J0A, chain A
Confidence level:confident
Coverage over the Query: 383-493,511-544
View the alignment between query and template
View the model in PyMOL