Diaphorina citri psyllid: psy12836

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------43
MVIVCSVILLVMITIEVEDTLRSALWELSSGAGRVKYYDCMTYVYLSFQSGTIVTGGIGTTLKMLTGPSSFNLVAFIVHVTIGMDTQLVFPKQKICRLFCENGENLRNRVHNIVNGVIVFDVVLRGDVLGGAKYTEETSARGKIVIVTGANTGIGKAIARELAKRKAKVIMACRDLDKCEKARKEVVLESKNKYVLCRKCDLASQESIRAFAEEVKKENKKINVLINNAGVSGCRKMLTEEKIELQLGVNHMGHFLLTMLLLDKLQANLSRYSLCNLIWYYVFQESAPSRIINVSSVAHKRGTINKEDLNSENSYDPTQAYNQSKLANVLFTRELAKRLEGTGITVNAVHPGIVNTDILRHSSYYDSWLSTVVLKPLVWLFIKSPRQGAQTIVYASLDPSLENVSGKYFACYDRYEARVDGRFSFVDAY
cEEEEEEEEEEcccccccccccccccHHccccccEEEEcccccEEEcccccccccccccccccccccccccEEEEEEEEcccccccccccccccccHHHHcccccccccHHHHHHHHHHHHHHHHEEccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHccccccEEEEccccccccccccccccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccEEEcccccccccccccccccccc
*VIVCSVILLVMITIEVEDTLRSALWELSSGAGRVKYYDCMTYVYLSFQSGTIVTGGIGTTLKMLTGPSSFNLVAFIVHVTIGMDTQLVFPKQKICRLFCENGENLRNRVHNIVNGVIVFDVVLRGDVLGGAKYTEETSARGKIVIVTGANTGIGKAIARELAKRKAKVIMACRDLDKCEKARKEVVLESKNKYVLCRKCDLASQESIRAFAEEVKKENKKINVLINNAGVSGCRKMLTEEKIELQLGVNHMGHFLLTMLLLDKLQANLSRYSLCNLIWYYVFQESAPSRIINVSSVAHKRGTINKEDLNSENSYDPTQAYNQSKLANVLFTRELAKRLEGTGITVNAVHPGIVNTDILRHSSYYDSWLSTVVLKPLVWLFIKSPRQGAQTIVYASLDPSLENVSGKYFACYDRYEARVDGRFSFV*AY
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MVIVCSVILLVMITIEVEDTLRSALWELSSGAGRVKYYDCMTYVYLSFQSGTIVTGGIGTTLKMLTGPSSFNLVAFIVHVTIGMDTQLVFPKQKICRLFCENGENLRNRVHNIVNGVIVFDVVLRGDVLGGAKYTEETSARGKIVIVTGANTGIGKAIARELAKRKAKVIMACRDLDKCEKARKEVVLESKNKYVLCRKCDLASQESxxxxxxxxxxxxxxxxxxxxxAGVSGCRKMLTEEKIELQLGVNHMGHFLLTMLLLDKLQANLSRYSLCNLIWYYVFQESAPSRIINVSSVAHKRGTINKEDLNSENSYDPTQAYNQSKLANVLFTRELAKRLEGTGITVNAVHPGIVNTDILRHSSYYDSWLSTVVLKPLVWLFIKSPRQGAQTIVYASLDPSLENVSGKYFACYDRYEARVDGRFSFVDAY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Retinol dehydrogenase 13 Does not exhibit retinol dehydrogenase (RDH) activity in vitro.confidentQ8NBN7
Retinol dehydrogenase 13 Does not exhibit retinol dehydrogenase (RDH) activity in vitro.confidentQ8CEE7

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0009706 [CC]chloroplast inner membraneprobableGO:0019866, GO:0031975, GO:0043229, GO:0042170, GO:0005623, GO:0043227, GO:0043226, GO:0005737, GO:0009941, GO:0009536, GO:0031090, GO:0016020, GO:0044435, GO:0044434, GO:0031969, GO:0031967, GO:0009507, GO:0009526, GO:0005575, GO:0043231, GO:0044464, GO:0009528, GO:0005622, GO:0044446, GO:0044444, GO:0044424, GO:0044422
GO:0009535 [CC]chloroplast thylakoid membraneprobableGO:0055035, GO:0034357, GO:0031976, GO:0043229, GO:0043227, GO:0043226, GO:0009579, GO:0009534, GO:0009536, GO:0016020, GO:0044436, GO:0044435, GO:0044434, GO:0005737, GO:0044446, GO:0031984, GO:0042651, GO:0009507, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0044422
GO:0003959 [MF]NADPH dehydrogenase activityprobableGO:0003824, GO:0003674, GO:0016651, GO:0016491
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0009987 [BP]cellular processprobableGO:0008150
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0065007 [BP]biological regulationprobableGO:0008150

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1YXM, chain A
Confidence level:very confident
Coverage over the Query: 131-267,286-303,316-418
View the alignment between query and template
View the model in PyMOL
Template: 1TK7, chain A
Confidence level:confident
Coverage over the Query: 11-88
View the alignment between query and template
View the model in PyMOL
Template: 3RSH, chain A
Confidence level:probable
Coverage over the Query: 142-210,234-308,321-394
View the alignment between query and template
View the model in PyMOL
Template: 3I3O, chain A
Confidence level:probable
Coverage over the Query: 96-268,289-362
View the alignment between query and template
View the model in PyMOL