Diaphorina citri psyllid: psy12837


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180----
MNSVRFHITTFHGKYYTPVWKTSKVCNEEINLTGHIGKLWTARITAGAEEHGVPYPLFREGLTRSNIMLDRKTLSDLAAWEPRTFKVKKSTVGTTMCRIYQFYTKPSYHSCESQVQALDLYSMKVKFHPLTGTQTCAPLFTRQTLSLTQIAAAKVIDDEVVGSRHLEQPKYFFRRDLLKKFWNH
cccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHccccccEEEECccccccccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHcc
***VRFHITTFHGKYYTPVWKTSKVCNEEINLTGHIGKLWTARITAGAEEHGVPYPLFREGLTRSNIMLDRKTLSDLAAWEPRTFKVKKSTVGTTMCRIYQFYTKPSYHSCESQVQALDLYSMKVKFHPLTGTQTCAPLFTRQTLSLTQIAAAKVIDDEVVGSRHLEQPKYFFRRDLLKKFWN*
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MNSVRFHITTFHGKYYTPVWKTSKVCNEEINLTGHIGKLWTARITAGAEEHGVPYPLFREGLTRSNIMLDRKTLSDLAAWEPRTFKVKKSTVGTTMCRIYQFYTKPSYHSCESQVQALDLYSMKVKFHPLTGTQTCAPLFTRQTLSLTQIAAAKVIDDEVVGSRHLEQPKYFFRRDLLKKFWNH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
50S ribosomal protein L20 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.confidentA7HPK9
50S ribosomal protein L20 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.confidentB6IPJ8
50S ribosomal protein L20 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.confidentQ2VYY8

Prediction of Gene Ontology Terms ?

No confident GO terms associated with the query are predicted

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2GHJ, chain A
Confidence level:very confident
Coverage over the Query: 17-96
View the alignment between query and template
View the model in PyMOL