Diaphorina citri psyllid: psy12852

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100--
MASLEWPCLLEDGVDREIRWLVYNVDHLDQEENEDSSSEDEFDRVPVLASSELPIPKWAHLDQDEMNDCTLVGIVNPSLFFLRLNQFQDIRVYIILLTLPRDVNIIYSLSRAILGTKRMAATNTTLVSEFKKSVKRRPNAPCYYFQDETWTIKQIDEYSNKIARILQDDGFKKGDVLALMCENRPEYVGVWLGAAKLGVISKLSNVVWLAQLLGKKMVHFKGIILELHRLMKLNKEIGVDVSKTSSRYSKEQCHPGLLCLARSDDKSGYNRVQVTDTSDSELAMILFVDYSDKQEIPYEDLVPIHRPQLISNLPFQAIECYLAGVEPLEGVWSQAAYDFLDDFTRLFARVVSVKLHGEETGGRRYAVELFDLDEELNINKELVALDLAKFSEDANVCLSEDDATIFKEIEKLMQSSESEDGEEVWEDLPDKSNHVIEKQAINFDQQDEEYVIDEAALLDEEEMTEFVRQLQSKIEQLEVDVTYSRFKQEASNARSTNDAAATTVKNLEAQIDEYSNKIARILQDDGFKKGDVLALMCENRPEYVGVWLGAAKLGVISALINTNLKKQPLVHSISTVKSKAIIVSALYYPEIEAIRESIPDVKLFLLDETKPDLPNLSDLMKTTPASEVKPSEPLQTSDSLLYIYTSGTTGLPKAAIMPNFKVLLGGQVGKHLLSLGSGDVIYNCLPMYHSAGGLIGTIPALILGSSIAIRTKFSASNYFRDCAKYKCNAGIYIGEMCRYLLASKESEADYSHQVVKMIGVGMRGDIWAKFVKRFHVQTIIEFYGATEGNANLVNMDNTEGAVGIIPTLLPTFLHPVAIIQFDLVENQPIRDPKTGLCIRCKYNQPGMIIGEIKQSDPSRHFYGYADKKESQKKILENVFKPGDKYFLSGDMMVMDELGYLYFKDRTGDTYRWKGENVSTMEVEATISKYLPYTEFTVYGVKVGDLDGRAGMIAIVDTSNQVDLKLLVQGLDANLPAYARPLFVRIMKAIEMTGTFKIKKIQLQNEGFDPSQISDDLYVRQGSEFVRMTPNTYEKIMNDQPGMIIGEIKQSDPSRHFYGYADKKESQKKILENVFKPGDKYFLSVIIRNFSLDVMAPPNPLPN
ccccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccEEHHHHHHHHHHHHHHHHHHHHHHHHcHHcccccccHHHHHHHHHHHcccccEEEEccCEECHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHcccHHHHHcccHHHHHHHHHccccHHccccccccccccccEEccccccccccccccccccccHHHHHHHHHccccccccccccccccccccHcccccccEEEEHHcccccccccHHHHHHHHHHHHHHHHHHEEEEECcccccccCEEEEEEcccHHHccccHHHHHHHHcccccccccccccccHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccccEEEEEHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEccccccccHHHHHHHHccccEEEEEccccHHHHHHHHcccccEEEEEEcccccccccHHHHHHccccccccccccccccccEEEEEccccccccccEEEcHHHHHHHHHHHHHHcccccccEEEEcccHHHHHHHHHHHHHHHHcccEEEEccccccccHHHHHHHccccEEEccHHHHHHHHccccccccccccEEEEEcccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccCEEEEEEcccccccccccccccccccccccccCEEEEcccccccccccccccHHHHHHHHHcccccccCEEEcccEEEEEccccEEEEcccccccccccccccHHHHHHHHHccccccEEEEEEECcccccccEEEEEEEcccccccHHHHHHHHHcccccccccEEEEEEcccccccccccHHHHHHcccccccccccccCCccccEEEEccHHHHHHHcccccccEEEEEcccccccccccccccccccccEEccccccccEEEEcccccccccccccccccccc
***LEWPCLLEDGVDREIRWLVYNVDHL*****************PVLASSELPIPKWAHLDQDEMNDCTLVGIVNPSLFFLRLNQFQDIRVYIILLTLPRDVNIIYSLSRAILGTKRMAATNTTLVSEFKKSVKRRPNAPCYYFQDETWTIKQIDEYSNKIARILQDDGFKKGDVLALMCENRPEYVGVWLGAAKLGVISKLSNVVWLAQLLGKKMVHFKGIILELHRLMKLNKEIGVDVSKTSSRYSKEQCHPGLLCLARSDD**GYNRVQVTDTSDSELAMILFVDYSDKQEIPYEDLVPIHRPQLISNLPFQAIECYLAGVEPLEGVWSQAAYDFLDDFTRLFARVVSVKLHGEETGGRRYAVELFDLDEELNINKELVALDLAKFSEDANVCLSEDDATIFKEI***************WEDLPDKSNHVIEKQAINFDQQDEEYVIDEAALLDEEEMTEFVRQLQSKIEQLEVDVTYSRFKQEASNARSTNDAAATTVKNLEAQIDEYSNKIARILQDDGFKKGDVLALMCENRPEYVGVWLGAAKLGVISALINTNLKKQPLVHSISTVKSKAIIVSALYYPEIEAIRESIPDVKLFLLDETKPDLPNLSD*****************TSDSLLYIYTSGTTGLPKAAIMPNFKVLLGGQVGKHLLSLGSGDVIYNCLPMYHSAGGLIGTIPALILGSSIAIRTKFSASNYFRDCAKYKCNAGIYIGEMCRYLLASKESEADYSHQVVKMIGVGMRGDIWAKFVKRFHVQTIIEFYGATEGNANLVNMDNTEGAVGIIPTLLPTFLHPVAIIQFDLVENQPIRDPKTGLCIRCKYNQPGMIIGEIKQSDPSRHFYGYADKKESQKKILENVFKPGDKYFLSGDMMVMDELGYLYFKDRTGDTYRWKGENVSTMEVEATISKYLPYTEFTVYGVKVGDLDGRAGMIAIVDTSNQVDLKLLVQGLDANLPAYARPLFVRIMKAIEMTGTFKIKKIQLQNEGFDPSQISDDLYVRQGSEFVRMTPNTYEKIMNDQPGMIIGEIKQSDPSRHFYGYADKKESQKKILENVFKPGDKYFLSVIIRNFSLDVMAPP*****
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MASLEWPCLLEDGVDREIRWLVYNVDHLDQEENEDSSSEDEFDRVPVLASSELPIPKWAHLDQDEMNDCTLVGIVNPSLFFLRLNQFQDIRVYIILLTLPRDVNIIYSLSRAILGTKRMAATNTTLVSEFKKSVKRRPNAPCYYFQDETWTIKQIDEYSNKIARILQDDGFKKGDVLALMCENRPEYVGVWLGAAKLGVISKLSNVVWLAQLLGKKMVHFKGIILELHRLMKLNKEIGVDVSKTSSRYSKEQCHPGLLCLARSDDKSGYNRVQVTDTSDSELAMILFVDYSDKQEIPYEDLVPIHRPQLISNLPFQAIECYLAGVEPLEGVWSQAAYDFLDDFTRLFARVVSVKLHGEETGGRRYAVELFDLDEELNINKELVALDLAKFSEDANVCLSEDDATIFKEIEKLMQSSESEDGEEVWEDLPDKSNHVIEKQAINFDQQDEEYVIDEAALLDxxxxxxxxxxxxxxxxxxxxxVTYSRFKQExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxDGFKKGDVLALMCENRPEYVGVWLGAAKLGVISALINTNLKKQPLVHSISTVKSKAIIVSALYYPEIEAIRESIPDVKLFLLDETKPDLPNLSDLMKTTPASEVKPSEPLQTSDSLLYIYTSGTTGLPKAAIMPNFKVLLGGQVGKHLLSLGSGDVIYNCLPMYHSAGGLIGTIPALILGSSIAIRTKFSASNYFRDCAKYKCNAGIYIGEMCRYLLASKESEADYSHQVVKMIGVGMRGDIWAKFVKRFHVQTIIEFYGATEGNANLVNMDNTEGAVGIIPTLLPTFLHPVAIIQFDLVENQPIRDPKTGLCIRCKYNQPGMIIGEIKQSDPSRHFYGYADKKESQKKILENVFKPGDKYFLSGDMMVMDELGYLYFKDRTGDTYRWKGENVSTMEVEATISKYLPYTEFTVYGVKVGDLDGRAGMIAIVDTSNQVDLKLLVQGLDANLPAYARPLFVRIMKAIEMTGTFKIKKIQLQNEGFDPSQISDDLYVRQGSEFVRMTPNTYEKIMNDQPGMIIGEIKQSDPSRHFYGYADKKESQKKILENVFKPGDKYFLSVIIRNFSLDVMAPPNPLPN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005789 [CC]endoplasmic reticulum membraneprobableGO:0005737, GO:0005575, GO:0005783, GO:0044432, GO:0016020, GO:0044464, GO:0043229, GO:0005623, GO:0043231, GO:0044446, GO:0042175, GO:0044444, GO:0012505, GO:0044424, GO:0044425, GO:0005622, GO:0043227, GO:0043226, GO:0044422, GO:0031090
GO:0031957 [MF]very long-chain fatty acid-CoA ligase activityprobableGO:0003824, GO:0003674, GO:0015645, GO:0016874, GO:0016877
GO:0031224 [CC]intrinsic to membraneprobableGO:0005575, GO:0044425, GO:0016020
GO:0044539 [BP]long-chain fatty acid importprobableGO:0051234, GO:0015718, GO:0015908, GO:0006869, GO:0015849, GO:0006811, GO:0006810, GO:0015711, GO:0051179, GO:0044765, GO:0008150, GO:0071702, GO:0015909, GO:0033036, GO:0010876, GO:0006820, GO:0044699, GO:0046942
GO:0009062 [BP]fatty acid catabolic processprobableGO:0006631, GO:0019752, GO:0044248, GO:0044281, GO:0044282, GO:0044242, GO:0044712, GO:0044710, GO:0016042, GO:0071704, GO:0006629, GO:0009987, GO:1901575, GO:0032787, GO:0008150, GO:0008152, GO:0072329, GO:0043436, GO:0044255, GO:0009056, GO:0044238, GO:0006082, GO:0046395, GO:0016054, GO:0044237
GO:0001676 [BP]long-chain fatty acid metabolic processprobableGO:0044238, GO:0006631, GO:0006629, GO:0006082, GO:0009987, GO:0044710, GO:0044237, GO:0032787, GO:0071704, GO:0008150, GO:0019752, GO:0008152, GO:0043436, GO:0044255, GO:0044281
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0004467 [MF]long-chain fatty acid-CoA ligase activityprobableGO:0003824, GO:0003674, GO:0015645, GO:0016874, GO:0016877
GO:0000038 [BP]very long-chain fatty acid metabolic processprobableGO:0044238, GO:0006631, GO:0006629, GO:0006082, GO:0009987, GO:0044710, GO:0044237, GO:0032787, GO:0071704, GO:0008150, GO:0019752, GO:0008152, GO:0043436, GO:0044255, GO:0044281
GO:0044459 [CC]plasma membrane partprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3R44, chain A
Confidence level:very confident
Coverage over the Query: 479-828,840-1007
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Template: 3R44, chain A
Confidence level:very confident
Coverage over the Query: 122-225
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Template: 3TSY, chain A
Confidence level:very confident
Coverage over the Query: 454-460,472-828,840-928
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Template: 2VSQ, chain A
Confidence level:very confident
Coverage over the Query: 123-268
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Template: 3RG2, chain A
Confidence level:very confident
Coverage over the Query: 479-826,838-1097
View the alignment between query and template
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Template: 1AMU, chain A
Confidence level:very confident
Coverage over the Query: 459-827,839-1009
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Template: 4B9X, chain A
Confidence level:very confident
Coverage over the Query: 219-392
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Template: 1RY2, chain A
Confidence level:confident
Coverage over the Query: 77-225
View the alignment between query and template
View the model in PyMOL