Diaphorina citri psyllid: psy12864

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------
MTWVLADYTAANTTELSVHKGQQVEVVHNSSAPPDWALGSGIEMTWVLADYTATNTTELSVHKGQQVEVVHNSSAPPDWALVRLSLGEECSEGLVPTCVLKQPPPSVLRTATSPSKRITLPIEQDLGRPGLDKSFYGDRQTTPKRIQ
cEEEEEccccccccccccccccccccccccccccccccccccEEEEEEEEcccccccEEEEEcccEEEEEEcccccccEEEEEEcccccccccCECccccccccccccccccccccccccccccccccccccccccccccccccccc
**W****Y*****************************LGSGIEMTWVLADYTATNTTELSVHKGQQVEVVHNSSAPPDWALVRLSLGEECSEGLVPTCV************************************************
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MTWVLADYTAANTTELSVHKGQQVEVVHNSSAPPDWALGSGIEMTWVLADYTATNTTELSVHKGQQVEVVHNSSAPPDWALVRLSLGEECSEGLVPTCVLKQPPPSVLRTATSPSKRITLPIEQDLGRPGLDKSFYGDRQTTPKRIQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0007266 [BP]Rho protein signal transductionprobableGO:0044700, GO:0051716, GO:0008150, GO:0050896, GO:0009987, GO:0050794, GO:0050789, GO:0065007, GO:0044763, GO:0007165, GO:0023052, GO:0007154, GO:0007265, GO:0007264, GO:0035556, GO:0044699
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1NG2, chain A
Confidence level:very confident
Coverage over the Query: 3-106
View the alignment between query and template
View the model in PyMOL