Diaphorina citri psyllid: psy12933


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60-----
MLKDLKCETSQSNSKEEAQSSAPHNQTPGHLIECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF
ccccccccccccccccccccccccccccccEEEEEEccccEEEEccccEEEEEEcccEEEEEEEc
******************QSSAPHNQTPGHLIECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF
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MLKDLKCETSQSNSKEEAQSSAPHNQTPGHLIECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Lysine-specific demethylase 8 Histone demethylase required for G2/M phase cell cycle progression. Specifically demethylates dimethylated 'Lys-36' (H3K36me2) of histone H3, an epigenetic repressive mark, thereby acting as a transcription activator. Regulates expression of CCNA1 (cyclin-A1).confidentQ1JP61
Lysine-specific demethylase 8 Histone demethylase required for G2/M phase cell cycle progression. Specifically demethylates dimethylated 'Lys-36' (H3K36me2) of histone H3, an epigenetic repressive mark, thereby acting as a transcription activator.confidentA8E534
Lysine-specific demethylase 8 Histone demethylase required for G2/M phase cell cycle progression. Specifically demethylates dimethylated 'Lys-36' (H3K36me2) of histone H3, an epigenetic repressive mark, thereby acting as a transcription activator. Regulates expression of CCNA1 (cyclin-A1).confidentQ497B8

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0051864 [MF]histone demethylase activity (H3-K36 specific)probableGO:0051213, GO:0003824, GO:0016706, GO:0016705, GO:0032451, GO:0032452, GO:0003674, GO:0016491
GO:0070544 [BP]histone H3-K36 demethylationprobableGO:0008214, GO:0044699, GO:0044267, GO:0006482, GO:0044260, GO:0006325, GO:0071840, GO:0016043, GO:0071704, GO:0016577, GO:0016570, GO:0006996, GO:0009987, GO:0044710, GO:0006464, GO:0043412, GO:0036211, GO:0008150, GO:0008152, GO:0070988, GO:0044238, GO:0051276, GO:0070076, GO:0019538, GO:0044237, GO:0043170, GO:0044763, GO:0016568, GO:0016569
GO:0006355 [BP]regulation of transcription, DNA-dependentprobableGO:0009889, GO:0080090, GO:0019222, GO:0060255, GO:0031326, GO:0031323, GO:0051252, GO:2000112, GO:0050794, GO:0050789, GO:0019219, GO:0010556, GO:0065007, GO:0051171, GO:2001141, GO:0008150, GO:0010468
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0003682 [MF]chromatin bindingprobableGO:0003674, GO:0005488
GO:0048522 [BP]positive regulation of cellular processprobableGO:0048518, GO:0008150, GO:0065007, GO:0050789, GO:0050794

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3D8C, chain A
Confidence level:very confident
Coverage over the Query: 9-65
View the alignment between query and template
View the model in PyMOL